LOCUS       DAKPJH010000001        76955 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.001, whole genome shotgun sequence.
ACCESSION   DAKPJH010000001 DAKPJH010000000
VERSION     DAKPJH010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 76955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 76955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..76955
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.001"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            32..901
                     /locus_tag="OY092_000001"
     CDS             32..901
                     /locus_tag="OY092_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1074982.1"
                     /translation="MNLDWYYTFVILAKTLNYRLASEEINLTIPSIHKQIKNLEQHLN
                     VKLFETYKNQIILTEDGHTFLPIAQSFIEQYESGIKHIQLKKTMFQSKLNVVVSSYIA
                     TFIMPKFLKSFFNEHPFIDVSLHVKNENIEKDINNHTYDIGISRNQPKLREVHSEKVC
                     EGKIVLIAPNKENNHLLTEASLFEKYKIISDNHPEYWSSLKNNILNIYEKAQFLSIND
                     VHTSIKLIEMNQGISFLPIYITTDSDYNISVINTKILQAPISFTYIYSKKESPEILAF
                     IRSFKKYIANEQL"
     gene            complement(960..3569)
                     /gene="clpB"
                     /locus_tag="OY092_000002"
     CDS             complement(960..3569)
                     /gene="clpB"
                     /locus_tag="OY092_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HCX1074983.1"
                     /translation="MDINKMTYAVQNALQQAVELSQQHKLQNIEIEAILSAALNESES
                     LYKSILERANIEVDQLNKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKE
                     YEDEYISMEHILRSAMDIDQTTKHYINNKVEVIKEIIKKVRGGNHVTSQNPEVNYEAL
                     AKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGL
                     AQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFI
                     DEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQK
                     VAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDL
                     VDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANE
                     KEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQL
                     EKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHL
                     SDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAA
                     SLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDE
                     VEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKETGEIT
                     ESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRIS
                     IEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGFPEGTTIKVNLNS
                     DNNLTFNVEKIHE"
     gene            complement(3773..5587)
                     /locus_tag="OY092_000003"
     CDS             complement(3773..5587)
                     /locus_tag="OY092_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCX1074984.1"
                     /translation="MNKTKGFTKYKKMRYMPGLDGLRAIAVLGIIIYHLNKQWLTGGF
                     LGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLLPAVIVLLMVVGTATLL
                     LKSDNIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQFYIFFP
                     VILVTLLLTIKKRYKIGFIFWGVSIISLGLMMFIYSINGDHSRVYFGTDTRLQTLLLG
                     VILAFLWPPFKLKNDPPKVVKYVIDSIGSLSFIILILLFFIINDETNWIYDGGFYLIS
                     ILTLFIIASVVHPSTWIAKIFSNPVLVFIGKRSYSLYLWHFAVISFVHSYYVDGQIPV
                     YVYFIDISLTIIFAELSYRFIETPFRKEGIKALNWRPSYIPQFIRMAIVVTLLIPFML
                     ILVGAFNKYGKDIIGEKANSFDTTIEDNYLMRIAPIDNIHIDGLVSEKKKESSDVYNN
                     IKPLLIGDSVMVDIGESFKSSVPKSRIDGKVGRQLYQTLPLVKANYSQYKKSSDQVVL
                     ELGTNGDFTVKQLDDLLNQFGKAKIYLVNTRVPRIYEANVNRLLADAAKRKSNVTLID
                     WYKRSQGHSEYFAPDGVHLEYKGVLALKDEILKALKKK"
     gene            complement(6242..6550)
                     /locus_tag="OY092_000004"
     CDS             complement(6242..6550)
                     /locus_tag="OY092_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HCX1074985.1"
                     /translation="MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGVCTV
                     DMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
                     "
     gene            6664..7488
                     /locus_tag="OY092_000005"
     CDS             6664..7488
                     /locus_tag="OY092_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCX1074986.1"
                     /translation="MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATG
                     RPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFKTCHEILDLGIAQNIIQGLQQYQ
                     VSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
                     EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGD
                     EDNDIEMIEYARHGVAMENGLQELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC"
     gene            7540..8856
                     /locus_tag="OY092_000006"
     CDS             7540..8856
                     /locus_tag="OY092_000006"
                     /EC_number="1.8.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-disulfide reductase"
                     /protein_id="HCX1074987.1"
                     /translation="MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA
                     LPYVIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQF
                     EESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVS
                     LEVLENLYERGLHPTLIHRSDKINKLMDTDMNQPILDELDKREIPYRLNEEIDAINGN
                     EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIG
                     DIATSHYRHVDLTASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFA
                     SVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGA
                     DKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK"
     gene            complement(9027..9416)
                     /locus_tag="OY092_000007"
     CDS             complement(9027..9416)
                     /locus_tag="OY092_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HCX1074988.1"
                     /translation="MLHLHILSWVLAIILFIATYLNISKNQGGSPFFKPLHMILRLFM
                     LLTLISGFWILIQSFMNGGANHMLLTLKMLCGVAVVGLMEVSIAKRKRHEQSHTMFWI
                     TIALIIITMVLGVILPLGPISKLFGIG"
     gene            complement(9741..10643)
                     /locus_tag="OY092_000008"
     CDS             complement(9741..10643)
                     /locus_tag="OY092_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HCX1074989.1"
                     /translation="MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTL
                     LAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNY
                     KDHANELNHEVERLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
                     PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENV
                     NIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPK
                     FLQPGDEVKVTIDNIGTLTTYIAK"
     gene            complement(10807..14460)
                     /gene="addA"
                     /locus_tag="OY092_000009"
     CDS             complement(10807..14460)
                     /gene="addA"
                     /locus_tag="OY092_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HCX1074990.1"
                     /translation="MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVER
                     IIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQ
                     AQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAF
                     IELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQLVTPYEEEAQQAQLIQLLT
                     DLSKVFITAAYDALNKANDLFSMMDGVDKHLAVIEDERRLMGRVLEGGFIDIPYLTGH
                     EFGARLPNVTAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQ
                     QLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYR
                     QHFQEILVDEYQDTNRVQEKILSCIKTGAEHNGNLFMVGDVKQSIYKFRQADPSLFIE
                     KYQRFTINGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVNYDESAQLYYG
                     APYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRS
                     ATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPL
                     QDIYLVGLMRSVIYQFKEDELAQIRILSPNDDYFYQSIVNYINDEVADAILVDKLKMF
                     LSDIQSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFEN
                     SSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLS
                     KDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYKAVAEKELVSEEMRLVY
                     VALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQ
                     SASIPDDLKFEKDIAQVEDSSRPNVNISIIYFEDVSTETILDNNEYRSVNQLETMQNG
                     NEDVKAQIKHQLDYQYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFST
                     YERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADA
                     KKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMID
                     LIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILNKEVK
                     GYLYFFKFGTLQL"
     gene            complement(14461..17937)
                     /gene="addB"
                     /locus_tag="OY092_000010"
     CDS             complement(14461..17937)
                     /gene="addB"
                     /locus_tag="OY092_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HCX1074991.1"
                     /translation="MTLHAYLGRAGTGKSTKMLTEIKQKMKQDPLGDPIILIAPTQST
                     FQLEQAFVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQE
                     QQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQTRTKNKLEDI
                     ALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKG
                     LIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFKQLYRFNN
                     QDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYQDIA
                     ILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLR
                     LLKTDVLTALYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTE
                     DERNTFKQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELPNQLMTERD
                     ELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERFLEVFDIGLEQLEFVMI
                     PQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVE
                     LSPTSDILQMDEAFVCYVAMTRAKGDVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLE
                     ITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLDDEIVADSWLDAYQVIRDSDHLNQ
                     GLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNE
                     RTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEQILPKVQFNLL
                     NSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLT
                     TTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYM
                     DIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWADIDEDKLEQDLIKKFKLSGLV
                     NADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFI
                     ETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQ
                     NININDEFGGEQ"
     gene            complement(18097..18672)
                     /gene="lepB"
                     /locus_tag="OY092_000011"
     CDS             complement(18097..18672)
                     /gene="lepB"
                     /locus_tag="OY092_000011"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HCX1074992.1"
                     /translation="MKKELLEWIISIAVAFVILFIVGKFIVTPYMIKGESMDPTLKDG
                     ERVAVNIIGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQD
                     EPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGL
                     IDEDQIVGKVSFRFWPFSEFKHNFNPENTKN"
     gene            complement(18688..19212)
                     /gene="lepB"
                     /locus_tag="OY092_000012"
     CDS             complement(18688..19212)
                     /gene="lepB"
                     /locus_tag="OY092_000012"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HCX1074993.1"
                     /translation="MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGD
                     RVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDAS
                     YAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDYDNNQHDSRQFGLIDKKDIIGNISL
                     RYYPFSKWTIQFKS"
     gene            complement(19217..19792)
                     /locus_tag="OY092_000013"
     CDS             complement(19217..19792)
                     /locus_tag="OY092_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HCX1074994.1"
                     /translation="MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINI
                     QAYGPILGILISWLGLISGTFTVYLICKRWVNTERMQRIKQRTAVQRLISFIDRQGLI
                     PLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTQ
                     PLRGILMLVVLVVFWIVGKKLEQHFMGSKKE"
     gene            complement(20117..21448)
                     /locus_tag="OY092_000014"
     CDS             complement(20117..21448)
                     /locus_tag="OY092_000014"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HCX1074995.1"
                     /translation="MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDF
                     LGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIGIGGSYLGARAVIEMLTSSFRNS
                     NEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEER
                     YGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSFLTAVGLLPIATAG
                     INIEAMMIGAAKAREELSSDKLEENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFN
                     EWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDIT
                     IEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVV
                     YFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL"
     gene            21799..23004
                     /locus_tag="OY092_000015"
     CDS             21799..23004
                     /locus_tag="OY092_000015"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HCX1074996.1"
                     /translation="MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDI
                     VYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVE
                     IAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKH
                     NIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDTADEIIL
                     TFDKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAE
                     VILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVS
                     GDVRIKLFKGNTIVNGRKSPYTLYDEKLATYTKEDAFNQDAAVGFIDIYGLPTQVNAM
                     LHGGYSNEQ"
     gene            22994..24373
                     /gene="argH"
                     /locus_tag="OY092_000016"
     CDS             22994..24373
                     /gene="argH"
                     /locus_tag="OY092_000016"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HCX1074997.1"
                     /translation="MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHAT
                     MLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGG
                     KLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQR
                     AQPISFAHNIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLN
                     FGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFST
                     GSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVH
                     TIKGSLRIFEGMIQTMTINKEQLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKI
                     VLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL
                     DVAKQLLSQ"
     gene            24615..25544
                     /locus_tag="OY092_000017"
     CDS             24615..25544
                     /locus_tag="OY092_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCX1074998.1"
                     /translation="MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQ
                     WHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMH
                     DETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERY
                     GPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHR
                     QNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHP
                     YTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK"
     gene            complement(25826..27070)
                     /locus_tag="OY092_000018"
     CDS             complement(25826..27070)
                     /locus_tag="OY092_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HCX1074999.1"
                     /translation="MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIP
                     VRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPY
                     GGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDE
                     YSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQG
                     FGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETI
                     SNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILL
                     VPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDM
                     RLAAYIIGIKRTAEAARYRGWA"
     gene            complement(27179..28369)
                     /locus_tag="OY092_000019"
     CDS             complement(27179..28369)
                     /locus_tag="OY092_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HCX1075000.1"
                     /translation="MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMD
                     MLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALP
                     MNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRG
                     YGPLLDGFRKVDFGDVDALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDE
                     HNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDV
                     FTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEV
                     RGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIR
                     HVFQ"
     gene            complement(28677..29804)
                     /locus_tag="OY092_000020"
     CDS             complement(28677..29804)
                     /locus_tag="OY092_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HCX1075001.1"
                     /translation="MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVE
                     LPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKAL
                     VQIHHGGAQALPELTPGGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEAT
                     RRAIEAGFDGVEIHGANHYLIHQFVSPYYNSRNDVWANQYKFPVAVIEEVLKAKEAYG
                     NKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAG
                     QERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFIEKIK
                     DGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK"
     gene            complement(30166..30543)
                     /locus_tag="OY092_000021"
     CDS             complement(30166..30543)
                     /locus_tag="OY092_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001067296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HCX1075002.1"
                     /translation="MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYV
                     HNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKY
                     GFQTLKERLPIWIKQSKQAIRND"
     gene            complement(30959..31552)
                     /locus_tag="OY092_000022"
     CDS             complement(30959..31552)
                     /locus_tag="OY092_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCX1075003.1"
                     /translation="MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFV
                     THAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALS
                     MANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVF
                     GQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE"
     gene            31616..31999
                     /locus_tag="OY092_000023"
     CDS             31616..31999
                     /locus_tag="OY092_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase-associated lipoprotein B"
                     /protein_id="HCX1075004.1"
                     /translation="MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNP
                     TETEGVFFHERKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKLKAQQTK
                     HAEMSLASLARLKEDYSLQYKENFK"
     gene            32130..34535
                     /gene="mnhA1"
                     /locus_tag="OY092_000024"
     CDS             32130..34535
                     /gene="mnhA1"
                     /locus_tag="OY092_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit A"
                     /protein_id="HCX1075005.1"
                     /translation="MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIY
                     MLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYL
                     SKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY
                     GAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIG
                     AFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTV
                     TLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYA
                     AAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITAL
                     SMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFI
                     MHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN
                     HTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNR
                     SANVIPNYSEKMTNSYVTDYSRNNLVIIFGTLILLTFVTIFSVPFNINFKDVSPIRIF
                     EVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESIS
                     TALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFY
                     QEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVK
                     NHE"
     gene            34528..34956
                     /gene="mnhB1"
                     /locus_tag="OY092_000025"
     CDS             34528..34956
                     /gene="mnhB1"
                     /locus_tag="OY092_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit B"
                     /protein_id="HCX1075006.1"
                     /translation="MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGL
                     LFASSLVIITIAFDIETMRKIFPLDFKILIGIGLVFCIATPIASWFLGKNFFTHVTFD
                     IPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE"
     gene            34956..35297
                     /gene="mnhC1"
                     /locus_tag="OY092_000026"
     CDS             34956..35297
                     /gene="mnhC1"
                     /locus_tag="OY092_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000402803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit C"
                     /protein_id="HCX1075007.1"
                     /translation="MEIIMIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLI
                     TMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDN
                     VESMKGVPEDD"
     gene            35290..36786
                     /gene="mnhD1"
                     /locus_tag="OY092_000027"
     CDS             35290..36786
                     /gene="mnhD1"
                     /locus_tag="OY092_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit D"
                     /protein_id="HCX1075008.1"
                     /translation="MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLV
                     AAIINLANVVKHGPIRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTI
                     GIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQE
                     TIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIF
                     VFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSH
                     YVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESGMIGAIYYT
                     LHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSG
                     FYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVK
                     YLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK"
     gene            36788..37267
                     /gene="mnhE1"
                     /locus_tag="OY092_000028"
     CDS             36788..37267
                     /gene="mnhE1"
                     /locus_tag="OY092_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit E"
                     /protein_id="HCX1075009.1"
                     /translation="MAVQLVLNFIIAVFWLFVTNSYTTNNFVLGFIFGLVLVYLLHRV
                     LPGRFYVITLYRIIKLVIIFLIELIKANFDVLKIIIKPSIKNEPGFFVYHTDLKKDWQ
                     IVLLSNLITLTPGTVVLGVSDDRTKIYIHAIDFSTKEQEVESIKTSLEKIVREVGEI"
     gene            37267..37560
                     /gene="mnhF1"
                     /locus_tag="OY092_000029"
     CDS             37267..37560
                     /gene="mnhF1"
                     /locus_tag="OY092_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit F"
                     /protein_id="HCX1075010.1"
                     /translation="MNHNVIIVIALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQ
                     LMAVIALFSILLNIKYMIVVIMMIGILAFLGTAVFSKFMDKGKVIEHDQNHTD"
     gene            37538..37894
                     /gene="mnhG1"
                     /locus_tag="OY092_000030"
     CDS             37538..37894
                     /gene="mnhG1"
                     /locus_tag="OY092_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit G"
                     /protein_id="HCX1075011.1"
                     /translation="MIKIILISLALIFVIIGALISALAAIGLLRLEDVYSRAHAAGKA
                     STLGAMSLLFGTFLYFIATQGFVNMQLIVAIIFVLITGPLSSHMIMKAAYNIKTPYTK
                     KTKVDEISEDLKDTKL"
     gene            38143..39297
                     /locus_tag="OY092_000031"
     CDS             38143..39297
                     /locus_tag="OY092_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HCX1075012.1"
                     /translation="MHWTIIGGGIQGTAIAQKLLSSGLTTDRLTIIDPHETFCQRFNS
                     FTNRIEMPYLRSPIVHHVHPQPFHLKQFAKQHQYTNAFYGPYQRPELTMFMDHIAHAS
                     KQYQLEDCLVQGLVQTLDKQEDKWHIKLEDGQIITTDCVVIAIGSTNIPFMPDILKDK
                     QNVNHIFEKEHDQVVYDKTDHIVGSGITAAHLALKLLNHDNDKKIHLWLNKDIEIHDF
                     DADPGWLGPKNMSTFLSTKSMPERNAIVQRERHKGSMPHELYLRLKKHIKNGRINVHK
                     TPITQISDGLINTENDSVPYQQIMVATGFEQDFMSQPLIKQLIQNYDAPINECNYPVI
                     SEKLEWIPNLFVAGCFADLELGPFGRNVMGGRKAAERIEQAFLKLQQYSA"
     gene            complement(39353..39727)
                     /locus_tag="OY092_000032"
     CDS             complement(39353..39727)
                     /locus_tag="OY092_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HCX1075013.1"
                     /translation="MTHLLETFEMSIDHQEDGLVVISMPVTDKVKQPFGYLHGGASIA
                     LGETACSLGSANLIDTTKFIPLGLEMNANHIHSAKDGRVTATAEIIHQGKSTHVWDIK
                     IKNDKEQLITVMRGTVAIKPLK"
     gene            complement(39746..41062)
                     /locus_tag="OY092_000033"
     CDS             complement(39746..41062)
                     /locus_tag="OY092_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HCX1075014.1"
                     /translation="MINAVVIAVILMIVLCLCRLNVVISLFISALVGGVVSGMSIEKV
                     INVFGKNIVDGAEVALSYALLGGFAALISYSGITDYLVGKIINAIHAENSRWSRVKVK
                     VTIIIALLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLIIGFGLCFPY
                     VLLPYGFGQIFQQIIQSGFAKANHPIEFNMIWKAMLIPSMGYIVGLLIGLYVYRKPRE
                     YETRKISDSDNVTELKPYILIVTIVAILATFLVQTFTDSMIFGALAGVLVFFISRAYN
                     WYELDAKFVEGIKIMAYIGVVILTANGFAGVMNATGDIDELVKTLTSITGDNKLFSII
                     VMYVIGLIVTLGIGSSFATIPIIASLFIPFGASIGLDTMALIALIGTASALGDSGSPA
                     SDSTLGPTAGLNVDGQHDHIRDTCVPNFLFYNIPLMIFGTIAAMVL"
     gene            complement(41473..42948)
                     /locus_tag="OY092_000034"
     CDS             complement(41473..42948)
                     /locus_tag="OY092_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family metallopeptidase"
                     /protein_id="HCX1075015.1"
                     /translation="MNFKLNNTLSNEINTLIIGIPEHLNQLERISFNHIDITESLERL
                     KHQHIIGSKVGKIYTTAFDVQDQTYRLITVGLGNLKARSYQDMLKIWGHLFQYIKSEH
                     IEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAPFKTNLNLISESL
                     IELDFIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTL
                     VSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTKNGM
                     ATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPDDVFTALSGET
                     VEVMNTDAEGRLVLADAVYYANQYQPSVIMDFATLTGAAIVALGDDKAAAFESNSKVI
                     LNDILQISSKVDEMVFELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSG
                     QTPHIHFDIAGPATTNKASYNGPKGPTGFMIPTIVQWLKQQ"
     gene            complement(43079..44287)
                     /locus_tag="OY092_000035"
     CDS             complement(43079..44287)
                     /locus_tag="OY092_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075016.1"
                     /translation="MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYH
                     YEATWLHEASAGTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDF
                     DILVVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLS
                     ILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHA
                     VSYLEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFE
                     GVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK
                     RILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGG
                     IGLAFKKGKF"
     gene            complement(44741..45100)
                     /locus_tag="OY092_000036"
     CDS             complement(44741..45100)
                     /locus_tag="OY092_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HCX1075017.1"
                     /translation="MPTVILTEAAAYEVKDMLKANEMPDGYLKIKVNGGGCTGLTYGM
                     GAEEAPGENDEILEYFGLKVLVDKKDAPVLNGTTIDFKQSLMGGGFQIDNPNAIASCG
                     CGSSFRTAKVAGNPENC"
     gene            complement(45113..45349)
                     /locus_tag="OY092_000037"
     CDS             complement(45113..45349)
                     /locus_tag="OY092_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HCX1075018.1"
                     /translation="MNPIVEFCLSNMAKGGDYVFNQLENDPDVDVLEYGCLTHCGICS
                     AGLYALVNGDIVEGDSPEELLQNIYAHIKETWIF"
     gene            45665..46729
                     /locus_tag="OY092_000038"
     CDS             45665..46729
                     /locus_tag="OY092_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075019.1"
                     /translation="MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKP
                     EFYALAAGTKSDKDVRMKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGL
                     GCEDKYHNVPGAEEYTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELR
                     ESRSDLEIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCD
                     EPKDIDLVVWTAGIQPVEVVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH
                     APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVT
                     GRLASILKSGVLWLYKYHNG"
     gene            complement(46788..47111)
                     /locus_tag="OY092_000039"
     CDS             complement(46788..47111)
                     /locus_tag="OY092_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HCX1075020.1"
                     /translation="MEHVSVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISF
                     KYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQ
                     KLVNE"
     gene            47212..47454
                     /locus_tag="OY092_000040"
     CDS             47212..47454
                     /locus_tag="OY092_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HCX1075021.1"
                     /translation="MPTEDTTMFDQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQL
                     HGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF"
     gene            complement(47712..48887)
                     /gene="dltD"
                     /locus_tag="OY092_000041"
     CDS             complement(47712..48887)
                     /gene="dltD"
                     /locus_tag="OY092_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HCX1075022.1"
                     /translation="MKLKPFLPILISGAVFIVFLLLPASWFTGLVNEKTVEDNRTTLT
                     DQVLKGTLIQDKLYESNKYYPIYGSSELGKDDPFNPAIALNKHNANKKAFLLGAGGST
                     DLINAVELASQYDKLKGKKLTFIISPQWFTNHGLTNQNFDARMSQTQINQMFQQKNMS
                     TELKRRYAQRLLQFPHVHNKEYLKSYAKNPKETKDSYISGFKENQLIKIEAIKSLFAM
                     DKSPLEHVKPATKPDASWDEMKQKAVEIGKADTTSNKFGIRDQYWKLIQESKRKVRRD
                     YEFNVNSPEFQDLELLVKTMRAAGADVQYVSIPSNGVWYDHIGIDKERRQAVYKKIHS
                     TVVDNGGKIYDMTDKDYEKYVISDAVHIGWKGWVYMDEQIAKHMKGEPQPEVDKPKN"
     gene            complement(48884..49120)
                     /gene="dltC"
                     /locus_tag="OY092_000042"
     CDS             complement(48884..49120)
                     /gene="dltC"
                     /locus_tag="OY092_000042"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002433359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     2"
                     /protein_id="HCX1075023.1"
                     /translation="MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLL
                     EIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR"
     gene            complement(49138..50352)
                     /gene="dltB"
                     /locus_tag="OY092_000043"
     CDS             complement(49138..50352)
                     /gene="dltB"
                     /locus_tag="OY092_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PG:teichoic acid D-alanyltransferase DltB"
                     /protein_id="HCX1075024.1"
                     /translation="MIPYGDFTFFLIALIALLPVIILGFLGKRSYIYNGVVTAFMIVL
                     IFSSDKHNLFDQKYLSVQLISFIIYVVWQVLLIMFYYHSKPKNNSFSKFVTVMVLSIL
                     PLALVKVLQSTWLGGHQIHFHESKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKV
                     WKLIQFISFFPTISSGPIDRYKRFVKDDKKVPTGNEYRELVLKAIHMIMLGFLYKYIV
                     AYFINTYAIMPLQLDLHGFVNLWLYMYAYSLYLFFDFAGYSLFAIAFSYLFGIKTPPN
                     FDKPFKAKNIKDFWNRWHMTLSFWFRDCIYMRSLFYMSRKKLLKSQFAMSNVAFLINF
                     FIMGIWHGIEVYYIVYGLYHAALFIGYGYYERWRKKHPPRWQNGFTTALSIVITFHFV
                     TFGFLIFSGKLI"
     gene            complement(50349..51806)
                     /gene="dltA"
                     /locus_tag="OY092_000044"
     CDS             complement(50349..51806)
                     /gene="dltA"
                     /locus_tag="OY092_000044"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HCX1075025.1"
                     /translation="MTDIINKLQAFADANPQSIAVRHTTDELTYQQLMDESSKLAHRL
                     QGSKKPMILFGHMSPYMIVGMIGAIKAGCGYVPVDTSIPEDRIKMIINKVQPEFVFNT
                     TDESFESLAGEVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYAS
                     LVQFTEWMLELNKSGNEQQWLNQAPFSFDLSVMAIYPCLASGGTLNLVDKNMINKPKL
                     LNEMLTATPINIWVSTPSFMEMCLLLPTLNEEQYSSLNEFFFCGEILPHRAAKALVSR
                     FPSATIYNTYGPTEATVAVTSIQITQEILDQYPTLPVGVERPGAKLSTTDEGELVIEG
                     QSVSLGYLKNDQKTAEVFNFDDGIRTYHTGDKAKFENGQWFIQGRIDFQIKLNGYRME
                     LEEIETQLRQSEFVKEAIVVPVYKNDKVIHLIGAIVPTTEVTDNSEMTKNIKNDLKSR
                     LPEYMIPRKFEWMEQLPLTSNGKIDRKKIAEVING"
     gene            complement(51822..51974)
                     /locus_tag="OY092_000045"
     CDS             complement(51822..51974)
                     /locus_tag="OY092_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499421.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HCX1075026.1"
                     /translation="MKSKSKQPPNKYVEAFKPYLLTLLYLAIFITLYLIYGSGDTHNN
                     FIYNEF"
     gene            complement(52022..52132)
                     /locus_tag="OY092_000046"
     CDS             complement(52022..52132)
                     /locus_tag="OY092_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075027.1"
                     /translation="MMTTNYYVESIKLKLNFIMNIDIMNCKKQILKRILY"
     gene            complement(52387..53346)
                     /locus_tag="OY092_000047"
     CDS             complement(52387..53346)
                     /locus_tag="OY092_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HCX1075028.1"
                     /translation="MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFATALR
                     DADACFITLSEQIDAEILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTE
                     TTAELGFTLMLAIARRIVEAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKA
                     FARRLQGFNTNILYHNRSRHKDAEADFNATYVSFEKLLAESDFIICTAPLTKETHHKF
                     NAEAFEQMKNDAIFINIGRGQIVDETALIDALDNKEILACGLDVLANEPIDHTHPLMG
                     RDNVLITPHIGSASVTTRDNMIQLCINNIEAVMTNQVPHTPVN"
     gene            complement(53373..54158)
                     /locus_tag="OY092_000048"
     CDS             complement(53373..54158)
                     /locus_tag="OY092_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000816183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HCX1075029.1"
                     /translation="MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTN
                     NSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALT
                     EAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGFLP
                     GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGIN
                     VGMDTIHVQTGVSTLEDVQNKNVPPTYSFKDLNEAIAELEKYM"
     gene            complement(54158..54592)
                     /locus_tag="OY092_000049"
     CDS             complement(54158..54592)
                     /locus_tag="OY092_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HCX1075030.1"
                     /translation="MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESS
                     VDIGNMIIDAFILRDPGNYKDVIDILELENVITKETQQAINKTVDIRKQFTYDYTALD
                     IKVIMPMFDDALPYYKQFITEVTTFLHQENVPVTAFGKGENQ"
     gene            54690..54956
                     /locus_tag="OY092_000050"
     CDS             54690..54956
                     /locus_tag="OY092_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3055 domain-containing protein"
                     /protein_id="HCX1075031.1"
                     /translation="MIDMYLYDDNEESQVQFVGFVGEHSRYDLMLVHTNRHYGKTLVL
                     NMQTNKFGIIGTDDLKEEGYIAHILGVNAEEGDEITEYLNEVIH"
     gene            complement(55035..55418)
                     /locus_tag="OY092_000051"
     CDS             complement(55035..55418)
                     /locus_tag="OY092_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HCX1075032.1"
                     /translation="MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGY
                     DQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVH
                     PSDVIDDDNKLQDVKIKPTIQETEH"
     gene            complement(55548..56465)
                     /gene="lipA"
                     /locus_tag="OY092_000052"
     CDS             complement(55548..56465)
                     /gene="lipA"
                     /locus_tag="OY092_000052"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HCX1075033.1"
                     /translation="MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEA
                     KCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNL
                     KHVVITAVARDDLRDAGSNVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASR
                     PDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEI
                     YETMDDLRANDVDILTIGQYLQPSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGP
                     LVRSSYHADEQVNEAAKEKQRQGEAQLNS"
     gene            complement(56549..57868)
                     /locus_tag="OY092_000053"
     CDS             complement(56549..57868)
                     /locus_tag="OY092_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HCX1075034.1"
                     /translation="MRLTIYHTNDIHSHLHEYERIKAYMAEHRPRLNHPSLYVDLGDH
                     VDLSAPITEATLGKKNVALLNEAKCDVATIGNNEGMTISHEALNHLYDEAKFIVTCSN
                     VIDESGHLPNNIVSSYIKDIDGVKILFVAATAPFTPFYRALDWIVTDPLESIKEEIEL
                     QRGKFDVLIVLSHCGIFFDETLCQELPEIDVIFGSHTHHYFEHGEINNGVLMAAAGKY
                     GNYLGEVNLTFEAHKVVHKTAKIIPLETLPEVETSFEEEGKTLMSNSVIQHPVVLKRS
                     MNHITEAAYLLAQSVCEYTHAQCAIINAGLLVKDIVKDEVTEYDIHQMLPHPINMVRV
                     RLSGVKLKEIIAKSNKQEYMYEHAQGLGFRGNIFGGYILYNLGYIHSTGRYYLNGEEI
                     EDDKEYVLGTIDMYTFGRYFPILKELPKEYLMPEFLRDIFKEKLLEY"
     gene            complement(57895..58722)
                     /locus_tag="OY092_000054"
     CDS             complement(57895..58722)
                     /locus_tag="OY092_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HCX1075035.1"
                     /translation="MLLTITLLVLIGGLSAIIGSIVGIGGGIIIVPTMVYLGVEHGLL
                     HNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISRY
                     LTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLF
                     AFVTTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHI
                     AQGHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLRTVMLLMGIYLIIRALI"
     gene            complement(58735..59583)
                     /locus_tag="OY092_000055"
     CDS             complement(58735..59583)
                     /locus_tag="OY092_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HCX1075036.1"
                     /translation="MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYA
                     IQPERNILKWIKETPDTFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQ
                     KKLAMVLVQFPPWFDCNAQNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFL
                     TEHQIIHAVVDEPQVKDGSVPLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRY
                     LYDYNEQELIDLAQKAQILAQKAKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAP
                     QQLKLF"
     gene            complement(59631..59714)
                     /locus_tag="OY092_000056"
     CDS             complement(59631..59714)
                     /locus_tag="OY092_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075037.1"
                     /translation="MIIIKRKHQAEERRKILIKQKHQTKVR"
     gene            complement(59968..61035)
                     /locus_tag="OY092_000057"
     CDS             complement(59968..61035)
                     /locus_tag="OY092_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HCX1075038.1"
                     /translation="MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIG
                     AGYFNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLE
                     EPVVKITEEQQFKCHIDTIIKKQVTVCCFTFGIPNESIIKRLKEANIKLIGTATSVDE
                     AIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMIGTISLVPQIVDVVSIPVIAAGG
                     IMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKL
                     ARGINNRFIEEMSQYEGDIPDYPIQNELTSSIRKAAANIGDKELTHMWSGQSPRLATT
                     HPANTIMSNIINQINQIMQYK"
     gene            complement(61049..62089)
                     /locus_tag="OY092_000058"
     CDS             complement(61049..62089)
                     /locus_tag="OY092_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCX1075039.1"
                     /translation="MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGI
                     VKLLEKPSEFITTILIGNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVI
                     PKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
                     EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVY
                     ETVMNKPYTRYPVYEGDIDNIIGVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAE
                     WVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQI
                     QFQQRKNRNVSI"
     gene            62455..62769
                     /locus_tag="OY092_000059"
                     /pseudo
     CDS             62455..62769
                     /locus_tag="OY092_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499407.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(62775..62914)
                     /locus_tag="OY092_000060"
                     /pseudo
     CDS             complement(62775..62914)
                     /locus_tag="OY092_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499406.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(63100..64497)
                     /gene="sufB"
                     /locus_tag="OY092_000061"
     CDS             complement(63100..64497)
                     /gene="sufB"
                     /locus_tag="OY092_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HCX1075040.1"
                     /translation="MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEP
                     EWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRT
                     FDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKY
                     FASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLII
                     ADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRT
                     FVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHK
                     APNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYN
                     EVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAV
                     EMNRLIKFEMEGSIG"
     gene            complement(64648..65112)
                     /locus_tag="OY092_000062"
     CDS             complement(64648..65112)
                     /locus_tag="OY092_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HCX1075041.1"
                     /translation="MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDR
                     IRLTFDIEDGIIKDAKFEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGE
                     DYVITEEMGDIEALQGVSQFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE"
     gene            complement(65102..66352)
                     /locus_tag="OY092_000063"
     CDS             complement(65102..66352)
                     /locus_tag="OY092_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCX1075042.1"
                     /translation="MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQ
                     VLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTA
                     SINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNI
                     EDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDM
                     QEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLP
                     TKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPP
                     KDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIY
                     NTKEDIDQLINALKQTKEFFSYEF"
     gene            complement(66458..67765)
                     /gene="sufD"
                     /locus_tag="OY092_000064"
     CDS             complement(66458..67765)
                     /gene="sufD"
                     /locus_tag="OY092_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HCX1075043.1"
                     /translation="MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPK
                     PDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQ
                     VDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYV
                     PKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIIS
                     EVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNL
                     FGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYI
                     KHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMS
                     RGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK"
     gene            complement(67863..68624)
                     /gene="sufC"
                     /locus_tag="OY092_000065"
     CDS             complement(67863..68624)
                     /gene="sufC"
                     /locus_tag="OY092_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HCX1075044.1"
                     /translation="MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKS
                     TLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFM
                     RSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQL
                     MMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVH
                     VMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE"
     gene            68952..69803
                     /locus_tag="OY092_000066"
     CDS             68952..69803
                     /locus_tag="OY092_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HCX1075045.1"
                     /translation="MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASIS
                     GIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYL
                     LKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTGLIIKYFIAGMC
                     ASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFTGLPILLAVGFGVLAGFIISS
                     KIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLG
                     RITAENE"
     gene            complement(70037..70231)
                     /locus_tag="OY092_000067"
     CDS             complement(70037..70231)
                     /locus_tag="OY092_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HCX1075046.1"
                     /translation="MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFV
                     ENAKEKATDFIDKVKGNKGE"
     gene            complement(70582..71403)
                     /locus_tag="OY092_000068"
     CDS             complement(70582..71403)
                     /locus_tag="OY092_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HCX1075047.1"
                     /translation="MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAE
                     ILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKI
                     VSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGV
                     KIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDS
                     IAVESAKDNPYANLIAVKEGNQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK"
     gene            complement(71421..72116)
                     /locus_tag="OY092_000069"
     CDS             complement(71421..72116)
                     /locus_tag="OY092_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075048.1"
                     /translation="MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFIL
                     GLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISG
                     PTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPAL
                     VSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQ
                     FIGDWLTNKLDKR"
     gene            complement(72109..73134)
                     /locus_tag="OY092_000070"
     CDS             complement(72109..73134)
                     /locus_tag="OY092_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HCX1075049.1"
                     /translation="MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGK
                     STLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKN
                     IMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPT
                     VLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGK
                     VIEQGPVTQVFENPQHTVTKRFVKDDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTT
                     EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVK
                     MEVLRHG"
     regulatory      complement(73224..73327)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(73385..73681)
                     /locus_tag="OY092_000071"
     CDS             complement(73385..73681)
                     /locus_tag="OY092_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCX1075050.1"
                     /translation="MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEI
                     LQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK"
     gene            complement(73674..74060)
                     /locus_tag="OY092_000072"
     CDS             complement(73674..74060)
                     /locus_tag="OY092_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HCX1075051.1"
                     /translation="MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDM
                     IESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLS
                     KHGFTCKKETPLLPNINNERLVLVNE"
     gene            complement(74535..75413)
                     /locus_tag="OY092_000073"
     CDS             complement(74535..75413)
                     /locus_tag="OY092_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HCX1075052.1"
                     /translation="MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMK
                     EETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLDDLPEQQELFPVKEGILQFW
                     ISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQAHLKSLDADNEDIPFSGAF
                     SIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEP
                     FNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTD
                     LEAMKFDDYMYSWDCS"
     gene            complement(75592..75972)
                     /gene="gcvH"
                     /locus_tag="OY092_000074"
     CDS             complement(75592..75972)
                     /gene="gcvH"
                     /locus_tag="OY092_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HCX1075053.1"
                     /translation="MAVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELP
                     ETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVK
                     VEISDESQLEALLTAEKYSEMIGE"
     gene            complement(76130..76486)
                     /locus_tag="OY092_000075"
     CDS             complement(76130..76486)
                     /locus_tag="OY092_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HCX1075054.1"
                     /translation="MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKT
                     IIANTGVEINKLFNTHGAKYRELDLKNKLQTLSEDEKLELLSSDGMLVKRPLAVMGDK
                     ITLGFKEDQYKETWLA"
     gene            76630..76950
                     /locus_tag="OY092_000076"
     CDS             76630..76950
                     /locus_tag="OY092_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCX1075055.1"
                     /translation="MQAIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVE
                     QYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLA
                     ETFK"
BASE COUNT        24590 a        13860 c        11191 g        27314 t
ORIGIN      
        1 aattattaac ttttttgaaa gaggtaagtt catgaatttg gattggtact atacatttgt
       61 cattttagcg aagacgttaa actatcgatt agctagtgaa gaaattaatc tcactatacc
      121 ttctatacat aagcaaatta aaaatttaga acagcatctc aatgtgaaac tatttgaaac
      181 ttataaaaat caaattatct tgactgaaga tggtcataca tttcttccaa ttgcgcaaag
      241 ttttattgaa caatatgaaa gtggcatcaa gcatatccaa cttaaaaaga cgatgtttca
      301 atcgaaatta aatgttgtcg tgtcttcata tatcgcgaca ttcattatgc ccaaattttt
      361 aaaatctttc tttaacgagc atccgtttat tgatgtttct ctccatgtca aaaatgaaaa
      421 tattgaaaaa gatattaata atcatacgta tgacatcggg attagcagaa atcaacctaa
      481 actaagagaa gttcattctg aaaaagtatg cgaaggtaaa attgtattga ttgctcccaa
      541 taaagagaat aatcatcttc taaccgaggc atctttattt gaaaaataca aaataataag
      601 tgataaccat ccagaatatt ggtcatcact taaaaataat attttaaata tttatgaaaa
      661 agcacaattt ctatctatca atgatgtgca tacttcaatt aaattaatcg aaatgaatca
      721 aggtatatca ttcctgccta tttatataac aacagatagt gattacaata tttcggttat
      781 taacacgaaa attttacaag cacctatttc atttacatat atatacagca aaaaagaaag
      841 tccagaaata ttggcgttta ttagatcatt taaaaagtat attgccaatg aacaattata
      901 ataaatttca aatctaaaaa accaagaatg cgattaatca tcacattctt ggttcaattt
      961 tattcatgaa ttttttcaac attaaacgtt aagttattgt ctgaatttaa attaacttta
     1021 atcgttgtac cttctgggaa tccctcttta atcatcatac gtgctaatgg tgtttcaatt
     1081 tggcgttgta caaaacgttt taatggtctt gcaccgtatt gaggttcata agcctcttga
     1141 cctagccaag ctttagcatc atcagaaact tcaattgaga ttcgttgttc tagtaatctt
     1201 atatttaatt gcgttaagat tttatctaca atcatactca tgtcatcaat agataatggt
     1261 ttaaataata cgatatcatc catacgattc aaaatttctg gtttgaaata tgcatttaaa
     1321 cttgtcataa cagctttttc tgttgattct gtaatttcac cagtctcttt tacgttttct
     1381 aataaaactt gagatccaat attacttgtc ataataataa tagtattttt aaaatcaacg
     1441 ctacgtcctt tagaatcagt taaacgacct tcatctaaaa tttgcaataa tacattaaag
     1501 acgtcagtat gcgctttttc aacctcatct aataaaataa ctgagtatgg attacgacga
     1561 accgcttcag ttaattgacc cccttcatca tgtccaatat atcctggagg tgcccctatc
     1621 aatcttgata ctgcatgttt ttccatatat tcactcatat caatacgaat catatgtttt
     1681 tcagaatcaa ataatgatgc agctaatgat ttagctaatt cagttttacc tactccagtt
     1741 ggacctagga ataagaaact accaataggt ctgtttggat ctttaatacc tgctcttgct
     1801 ctaactactg catctgaaac caggtcaacc gctttatctt gacctacaac acgtttatgc
     1861 aagatgtcac ttaagtgaag taatttttca cgttctgttt caactaattt tgaaactggt
     1921 atgcctgtcc attggctgac aatatcgcca atttcttcgt ctgttacaac ttcacgaatc
     1981 attcgatctg tatcttcacc ttgctcatct tggaaattat cctctaattc tctaagttct
     2041 ttttccaatt gaggaattgt tccatattgt agttcagcag ctttttctaa attgttattt
     2101 gtttgtgcat cttccaacgc ttgtctactt tcatctagtt gcgcacgttt ttcttgtaaa
     2161 tttgctattt tttctttttc tgattctaca cgagattgaa gtgctgcttg tttctctttt
     2221 tcattggcaa gctcttcttg tagttcttgt aatctctgtt tgctcgcatt gtcagattca
     2281 tttttaagtg cgctttcttc aatttctaat tgcatgacac gtctattaac ttgatccaat
     2341 tcagttggat ttgatcccat ttccgtacga attgttgcac atgcttggtc aactaaatca
     2401 atcgctttat ctggtaaaaa acgatcagtg atgtaacgat cagacaattc agcggcagca
     2461 actaaggctc tatcttgaat acgcacacca tgatacactt catatcgttc ttttaaacca
     2521 cgtaaaattg aaattgtatc ttcaacatca ggctcactaa ctgctacttt ttggaaacga
     2581 cgctctaatg ccgaatcttt ttcaatatat tctcgatatt catttaaagt tgttgcacca
     2641 atacaatgta actctcctcg tgctaacatt ggttttagca tgttgcctgc atccatggca
     2701 ccatctgttt taccagcacc aacaagcata tggatttcat caataaataa tataattcta
     2761 ccatcagact ctttaacttc ttttaggact gcttttaatc tctcttcaaa ttcaccacga
     2821 tatttagcgc ccgctactaa tgcgcttaaa tctaactcaa aaacagtttt atctaataat
     2881 gattctggca catctttctt aactatacgc tgcgctaatc cttcaacaat tgcagtttta
     2941 ccaacacctg gttcaccaat gagcacaggg ttgtttttag ttttacgact taaaatacga
     3001 atcgtatttc gaatttcttc atctcttcct ataacaggat ccattttacc ttgtctaact
     3061 tcttctacta agtcgcggcc atatttagct aatgcttcgt aattaacttc tggattttgt
     3121 gatgtcacgt gatttccccc tcttactttt ttaataattt ctttgataac ttctacttta
     3181 ttatttatat aatgttttgt tgtttgatca atgtccattg ccgaacgtaa aatatgctcc
     3241 attgaaatat attcatcttc atattctttc atgtatgatt cagccttagt tatcaattgg
     3301 tttgcttgtt ggctaatata ttgaccatat tgtatattgt caccttctac agatgcatac
     3361 gtgtttagtt tgtcttcata agctttgttt aattgatcta cctcaatatt tgctcgttct
     3421 aaaatacttt tatataagct ttcactttca tttaaggcag cgcttaaaat tgcctcaatt
     3481 tctatatttt gtaatttatg ttgctgactc agttcaactg cttgttgtaa agcattttga
     3541 acagcatatg tcattttatt tatatccata taatttcacc tctaatttgt agagttggtc
     3601 aagttgcact tttgactttg actttctttg accttaatta tattatagtc ccaatataat
     3661 catttatcaa ctcttttaca cttaaatttc ctaatatttg taaataattt tttgaattaa
     3721 aaaaatctag ctaatgttac gttacacatt aactagactt attaaacata tgttatttct
     3781 ttttaagtgc ttttaatatt tcatctttta aagctaggac tcctttgtac tctaaatgta
     3841 caccgtctgg tgcaaaatat tcactatgtc cttgtgatcg cttataccaa tcaattaatg
     3901 tgacattgga ctttcgtttc gctgcgtcag ctaataatcg atttacattt gcctcataaa
     3961 ttcttggaac acgtgtatta actaaataaa tcttggcttt tccaaattga tttagtaaat
     4021 cgtcgagctg tttgacagta aagtcgccat ttgtacctaa ttctaatacg acttgatcag
     4081 atgatttttt atattgtgaa taattcgctt taactaaagg taaggtttga tacaattgac
     4141 gccctacttt tccatcaatt ctagacttag gaactgatga cttaaatgac tcaccgatat
     4201 caaccattac tgaatcaccg attaaaagag gtttaatatt attatatacg tcggaagatt
     4261 cctttttctt ctcacttact aagccatcaa tgtgtatgtt atcaattggt gctatccgca
     4321 ttaaataatt atcttcaata gtggtatcaa agctattcgc tttttctcca ataatgtctt
     4381 taccatattt attgaatgca cctactaaaa tcaacataaa tggaattaac aaggttacta
     4441 caattgccat tcttataaat tgtggtatat aagaaggtcg ccaatttaaa gctttaatac
     4501 cttcttttct aaatggagtt tctataaagc gatatgatag ctctgcaaat ataattgtta
     4561 aacttatatc tataaagtac acatatacag gtatctgtcc gtctacatag taactatgta
     4621 cgaaactaat tactgcaaaa tgccataaat ataaactata agaccttttc ccgataaata
     4681 ctaacactgg atttgaaaat atcttcgcta tccatgtaga tggatgaacg acactggcaa
     4741 taataaataa cgttaatatg gatattaaat agaaaccacc atcatatatc caattcgtct
     4801 catcattaat aatgaaaaat aataatataa gtattataaa tgataaacta cctatgctat
     4861 caataacata ttttacaact ttaggtggat catttttcaa tttaaacggt ggccataaaa
     4921 aagctaaaat aacacccagt aacaatgtct gtaatctagt atctgtacca aaatacactc
     4981 gtgaatgatc cccattaata ctgtagataa acatcattaa ccctaaagaa attattgata
     5041 ctccccaaaa aataaatcct attttgtatc gctttttaat tgttaacaat aatgtaacca
     5101 aaataactgg gaaaaatatg taaaactgtt cttcaattgc taaagaccat aaatgcttta
     5161 atggcataaa tgaaaattgc tcaaaataat taacatcttt tgctatatac caccagtttg
     5221 atacataaaa tatcgcagca ataatatcat gtttaaccct aatgatatta tctgatttta
     5281 ataataaggt tgctgtccct acaaccatta ataaaactat gactgctggt aataaacgtt
     5341 ttaaacgacg tatccaaaag cttttcaatt taatgatacc tgtgtcatca tactctttta
     5401 gtaataagct cgtaattaaa taaccagaga tcacaaaaaa tgtatccaca cctaaaaagc
     5461 cacctgtcaa ccattgctta tttaagtggt aaataataat tcctagaaca gcgattgccc
     5521 tcaaaccatc gagccctggc atatatctca ttttcttata ctttgtaaaa ccctttgttt
     5581 tgttcatttt tgcattcttc ccttttaaaa ctgttcttct tagatgctta attaaattta
     5641 gttatgctgt ttaaaagaat attgaaatgc atatgtatat tattgaatta cgacatcatc
     5701 aaaatcatat tgactaaaat actgttaaat taaaaaaatt accaatgatg attcttactt
     5761 cgaaatccaa tttgtaatgc aactcggcaa cttaaaaact atgaagtatt atgtattgta
     5821 atataactgt aatataaatt caatttatta taaaaatttt caagaaaata ttcaactaga
     5881 aaatgaattg tgcgctctta gaagtgagaa acactgtctt aattcatatt ttttgaaaca
     5941 agttagatat aaattttcaa aataaaatca gaacctagaa cataaataag gctcccttca
     6001 aaattttcat ttttcaatgt ctactttgaa gggagcttat tcacaatgaa ttatactcta
     6061 caaggttata ttgactgcgg ggcccaaaca cagagaattt caaaaagaaa ttctacaagc
     6121 aatgcgagtt ggggagcggg cccaaacaca gagaatttcg aaaagaaatt ctacaagcaa
     6181 tgcaagttgg gagcggatcc ccaattggat ttccaatttc tacaggcaat gcacgtttat
     6241 gttagctcac accaagtgca atcttagcgt aacgtgacat catatctttt gtccaaggtg
     6301 gactccatac gatattcact tcagtatcct gaatttcagg aatctctgct aatactgttt
     6361 taacttgatc aataatttga ggtcccattg gacatcccat tgatgttaaa gtcatatcaa
     6421 ctgtacatac gccttcatca tcaacattca ctttgtatac taaacctaaa ttaacgatat
     6481 caattcctaa ttcagggtca attaccattt ctaatgcacc taagatacta tctttcaatg
     6541 cctcttccat ccatatcacc tctttaatgt catattattc ataatatatc aaatatccga
     6601 caaaacgcca ataaaatgct atgatgtatc tatatgaact aagcaactta tgaggagaga
     6661 gatatgcaac cacatttaat atgtctagac ttagacggaa cattattaaa cgataacaaa
     6721 gaaatttcat catatactaa acaagtatta aatgaattac aacaacgtgg acaccaaatt
     6781 atgattgcga ctggcagacc ttatcgtgca agtcaaatgt attatcatga attaaattta
     6841 acgacaccaa ttgttaattt taatggcgct tacgtacatc accctaaaga taaaaacttc
     6901 aaaacttgcc atgaaatttt agatttaggc atcgcacaaa acattattca aggattacaa
     6961 caatatcaag tatcgaatat tatagcagaa gtgaaagatt atgttttcat taacaatcat
     7021 gatccaagat tatttgaagg tttttcaatg ggtaatccaa gaattcaaac tggtaattta
     7081 cttgtccact tgaaagaatc ccctacctca attttaattg aagccgaaga aagtaaaata
     7141 cctgaaatca aaaatatgct tactcatttt tatgccgatc atattgagca tcgacgctgg
     7201 ggcgcaccat tccctgtcat tgaaattgta aaacttggta ttaataaagc aagaggcatt
     7261 gagcaagtta gacaattttt aaatattgac cgaaataata ttattgcatt cggtgatgaa
     7321 gataatgata ttgaaatgat tgagtacgcc cgccatggtg ttgctatgga aaatggtttg
     7381 caagaactta aagatgtagc gaataatatt acattcaaca ataatgaaga tggcattggt
     7441 cgatatttga atgatttctt taatttaaat attagatatt actgttaatt tataactaat
     7501 cattttataa tattttaaaa caataggagg taagttacga tgcccaaaat agtcgtagtc
     7561 ggagcggtcg ctggcggtgc aacatgtgcc agccaaattc gacgtttaga taaagaaagt
     7621 gacattatta tttttgaaaa agatcgtgat atgagctttg ctaattgtgc attgccttat
     7681 gtcattggcg aagttgttga agatagaaaa tatgctttag cgtatacacc tgaaaaattt
     7741 tatgatagaa agcaaatcac agtaaaaact tatcatgaag ttattgcaat caatgatgaa
     7801 agacaaactg taactgtatt aaatagaaag accaacgaac aatttgaaga atcttacgat
     7861 aaactcattt taagccctgg tgcaagtgca aatagccttg gctttgagag tgatattaca
     7921 tttacactta gaaatttaga agacactgat gctatcgatc aattcatcaa agcaaatcaa
     7981 gttgataaag tattggttgt aggtgcaggg tatgtttcat tagaagttct tgaaaatctt
     8041 tatgaacgtg gtttacaccc tactttaatt catcgatctg ataagataaa taaattaatg
     8101 gataccgaca tgaatcaacc tatacttgat gaattagata agcgggagat tccataccgt
     8161 ttaaatgagg aaattgatgc tatcaatgga aatgaaatta catttaaatc aggaaaagtt
     8221 gaacattacg atatgattat tgaaggtgtc ggtactcacc ccaattcaaa atttatcgaa
     8281 agttcaaata tcaaacttga tcgaaaaggc ttcataccgg taaacgataa atttgaaaca
     8341 aatgttccaa acatttatgc aataggagat attgcaacat cacattatcg acatgtcgat
     8401 ctaacggcta gtgttccttt agcttggggc gctcaccgtg cagcaagtat tgttgccgaa
     8461 caaattgctg gaaatgacac tattgaattc aaaggcttct taggcaacaa tattgtgaag
     8521 ttctttgatt atacatttgc gagtgtcggc gttaaaccaa acgaactgaa gcaatttgac
     8581 tataaaatgg tggaagtcac tcaaggtgca cacgcgaatt attacccagg aaattcccct
     8641 ttacacttaa gagtatatta tgacacttca aaccgtcaga ttttaagagc agctgcagta
     8701 ggaaaagaag gtgcagataa acgtattgat gtactatcga tggcaatgat gaaccagcta
     8761 actgtagatg agttaactga gtttgaagtg gcttatgcac caccatatag ccaccctaaa
     8821 gatttaatca atatgattgg ttacaaagct aaataaatga atcatgcgat tcaatctaat
     8881 cttaattgtc taggttagaa ttatgttgga ctggtactac tatccagtcc attttttatg
     8941 tttaacattt ttaaaatcaa aaaagacata aggtcttgga ctaataattg tccatgcctt
     9001 atgtcataaa ctatatgtct tatcaattag ccaataccga ataattttga tataggccct
     9061 aacggtagaa tgacacctaa taccattgtg atgataatta atgcaattgt tatccaaaac
     9121 attgtgtgac tttgttcatg tctctttctt ttagcaatcg acacttccat caatccaact
     9181 actgcaacac cacacagcat tttcaatgta agcaacatat gatttgcccc gccattcata
     9241 aatgactgaa ttaatatcca aaatcctgaa attaacgtca acagcataaa taagcgtaaa
     9301 atcatgtgca acggtttgaa aaatggtgat ccgccttgat tttttgaaat gtttaagtat
     9361 gtagcgataa ataaaataat cgctaatacc caacttaata tatgtaaatg taacatactg
     9421 attcccccca ctttaataat ttatattatt aaattaaagc ttcttgggat taatacccac
     9481 ttgcttgtaa tttaatcatg atttgattat acacgaatat atattctacc acacttctat
     9541 atttgagagg aagaacatga cattttattc cttattagaa tattgtgcat ctgctgtaaa
     9601 ataatcaact acttcttaat atcaatattt cactttcatc tcaaaatggt aacattataa
     9661 acaatgatct ttaacacctt attagaaaag caaaaaacta accaatctat ataaagactg
     9721 gttagctttt taaatgataa ttatttagcg atataagttg tcagcgttcc aatattatca
     9781 atagtcactt taacttcatc acctggttgt aagaatttag gtggttgcat acctgcacca
     9841 acgcctgctg gtgtaccagt tgcaataata tctcccggat gtagtgcaac atattttgaa
     9901 atttcttcta ttaattcatc aattttaaga atcatttcgc cagtgttacc atcttgtcta
     9961 atttcattgt taacttttgt aacaatattt acattttcag gtaatggtag ttcgtcttta
    10021 gtaacgatat aaggacccat tgggcaaccg ccagttaaac tttttgataa aaatgcttga
    10081 tcttgttcac tttgtgcttt gcgatcagtg atatcgttaa taattgtata gccgtaaaca
    10141 taatctaaag ctaatgcttt tggaatcttt tcaccagact taccaataac aatacctaat
    10201 tcaccttcat aatctaattg atcagtaata tctttatgat ttggaattgt tgcattatct
    10261 cctgttaaag atgacgctgc ttttgtaaat acatataatc tttctacttc atgatttaat
    10321 tcgttcgcat gatctttgta atttctacca aaagcaatca cattattcgg aggtgttact
    10381 ggtggtaaga attcaatgtc attaaatgaa attttatagt cttcagcttt gccgctatct
    10441 tctgctgcta caactgcttt acgtacttgt tcttgaaaat ctaaagtatg attttgttgt
    10501 aaaccagcta acaatgtttt aggatggaaa tctccttctg caaagtcagc aaatacttgt
    10561 gttaaatccc atacagcatc ttcgcgtttt actttaacgc catatgaagt tttgtcatta
    10621 tacttgaatg ataagaattt cattcattct caactcctca tctttatctt aattcacatt
    10681 ataacttttt tcgttatcaa ataacaaata aataagtaag acaattttga aaatgagttg
    10741 tgttcattct gctacaaggg ctttgcactt aatcgaaatt tttttattct tttgaaaatc
    10801 aaaatactac agttgcaatg taccaaattt gaagaagtat aaataacctt taacttcttt
    10861 attaagaatc gtttgaagcg tattttgata atatttcatc tgtatcttat atttattttt
    10921 taattgtgta ccaatttctt catctgtcat cccacggcga cgattaaatg catcggtttt
    10981 atagtctaca aaataatgca caccatcttt aacaaagatt aagtcaatca taccttgaat
    11041 aattgagacg tcttcgtctc cttgtggcaa ttggtcaact aatgcttggt taactacaaa
    11101 cggtaattca cgataaactt gctctgcttc agcaataatc gaatataact cactattgat
    11161 aaatgtcatt atttcatcca tacggatatc ttttttcgca tctgcttcga taatatgttt
    11221 atcgattaat ccatcgatat actgatgtaa ctcaacttca gatatgcgtt cttttttgaa
    11281 tggtaaatgt tgcatcactg tatgcattaa cgtaccaatt tcattcgctt ttcgtttacc
    11341 ttgttcactt agaaatttag gtcgttcata cgttgaaaaa ccgatacgat attgtcttac
    11401 tcgttcgtaa cttgtgccac tttcttctgt ttcatattgc cttttcaatt cagaaacaga
    11461 ttgttttgat ggctttttag tatcatttac atatggatat tgataatcaa gttggtgttt
    11521 aatttgtgct ttaacatcct cattaccatt ttgcatagtt tctaattgat taaccgaacg
    11581 atattcatta ttatctaaaa tggtttctgt agacacatct tcaaagtata taattgaaat
    11641 atttacattc ggacgactac tatcttcaac ttgtgctata tctttttcaa attttaaatc
    11701 atctggaatt gacgcagatt gatgtttaga taaaatacta taaataagat ggaacggatt
    11761 tggtgaagtt aatcgttcat tgacagcaat atgctcacca gaaatagaca attgctctag
    11821 ttctagtaac gatttatcat ttttcactct accaattaaa taaagttgtt ctttcgctct
    11881 tgttaatgct acatagacta atcgcatttc ttctgacaca agttcttttt cggcaacagc
    11941 tttatatgca accgaagcta aagatggaaa tgccatttct ttatccacat caaaataatc
    12001 cattccgaga ccaaattgct gatttaaaat aactggttgt ttcaaatcac gtttattaaa
    12061 atcttttgac aatccagaat aaatgacaaa tggaaactct agacctttac tactatgaat
    12121 tgtcatcatt ctaacgacat tatcgtttgg accaactaca ttttcctcac caaaatcttt
    12181 gcctctttca atcaattcat cgataaaacg aataaattga tataaacctc taaaacttga
    12241 attctcaaac tcgatagctt tattaaataa accataaagg tttgcacgtc gtccacgtcc
    12301 accaataagt ccactaaagt attgaataac ataatgatca ttataaaatt tatcaattaa
    12361 ctgatacacc ggatgatctt tactatattg ttggtaactt tgaatatctg ataaaaacat
    12421 ctttaattta tcaactaaaa tagcatctgc tacttcgtca ttaatgtaat ttacaatcga
    12481 ttgatagaag tagtcatcat ttggactcaa tattctaatt tgagctaatt cgtcttcttt
    12541 gaactgatat ataacggagc gcattaaccc aactaaataa atatcttgta atggattatc
    12601 tatcgctctt aaaaatgata atactaagcg gacttctgtt tgttcaaagt aaccttcacg
    12661 actattcaca tggaatggaa tatcttcatt tttaaaggct tgttgtaaat tgcgagcttg
    12721 tccaaagctg cgttctagaa taacgatatc tttgtatgtc gcacttctat agcttcctgt
    12781 tttcatatca taaacttttt gatgttctaa gatatcttta acttgttcta ctataaaatg
    12841 cgcttcttgt tcactaccag ttaaatcact atgttcttga tccgcttcaa caagcacttt
    12901 taagtttact ggatggtccg attcatcata tggtgcacca taatacaatt gtgctgattc
    12961 atcataattt acttcaccga cttgttcatc catcatatgt ttgaatatat agttagtcgt
    13021 tgacagtact tcttttcgag aacggaagtt ttgcgacaaa tcaattcgac gtccagtgcc
    13081 atctccattt atagtaaagc gttgatactt ttcaataaat aaacttggat cagcttgtct
    13141 aaatttataa atggattgct taacatctcc aaccataaat aaattaccat tatgttctgc
    13201 acccgttttt atgcaagata gtattttctc ttgaactcgg ttcgtatctt gatactcatc
    13261 gaccaatatt tcttggaagt gttgacggta tgattcggca atttctgaag gcgaaccatc
    13321 ctcattagtt aaaatttgta atgcaaaatg ttcataatca gaaaaatcta aaatattttt
    13381 gctacgcttt tttcgattga attctgacat aacatctttc acaatacgcg caaggtactt
    13441 tactcgtggc gccaattgtt gcatatcagc tttcaaatca tcagcttctc ttgaaaagta
    13501 atcactcttc actttatcaa ttaatgattt atatttttta tactgaagtt tagcatcttc
    13561 taaggcatcg accatcattt catttgcttc tttaattttc gctgttacat taggcaaacg
    13621 cgcgccaaat tcgtgaccag ttaaataagg tatatcaata aagccacctt ctaaaacacg
    13681 ccccattaaa cgtcgttcat cttctataac agctaaatgt ttatcgacgc catccatcat
    13741 actaaacaaa tcattcgcct tatttaaagc atcataggca gctgtgataa atactttaga
    13801 taagtctgtt agtagttgaa taagttgcgc ttgttgtgct tcttcttcgt atggtgtcac
    13861 caattgatcc aaccaatttg taggatttgg atttgcaacg ctaaagaaat acaattgttt
    13921 aataatcatt cgaaactgat catcacttct atctgaagac aattgctctg ttaattcaat
    13981 aaaagcagga tcaaggatat cgtaatgttg ttctatgacc tcatctatcg tttgttctaa
    14041 taataaaata ttttcagctt cactgcttgt tctaaagttc gggtcaatat ttaatacatc
    14101 ataatgctgt tgaattaatt tcaagcaaaa actatgaagt gtagatattt gtgcttgatg
    14161 aattttgata cgttggtttt tcaagtgtgc atttgcagga tcagcaatcg atgcctcttg
    14221 aatacgttgg tctacacgat gcttcatttc acgtgcgctt aagtttgtaa acgttacgac
    14281 taaaagtcga tcgacatcaa tgccatcacg taaaatcttt tggataatac gctcaactag
    14341 tacagctgtt ttacctgaac ctgccgcggc tgcaacaagt acatcttgtc cagttgcgta
    14401 aatactttgc cattgcgcgt cagtccaaat cacgccttgt ggtttctctg gaattgtcat
    14461 ctattgctca cccccaaatt catcattaat gttaatattt tgaattgctt caattggatt
    14521 tattgtttca tctacagttc gatatcgctt actatcaatc atgccatcta catgacatac
    14581 cgattgataa ctacaaaaag cacatggcaa tttttgtttg tactttaatg gtgcaacttc
    14641 agtatgtcca tccataatat ttgaagcggt ttctataaaa ttctctttgt tatgttggat
    14701 gaatttataa atcgttgctt catctgcaac ttgactgcct cgtttactca aagagccatc
    14761 tttattcaaa ccaactggta caatatctga agtgaattta ggttctaaac gaatatccaa
    14821 tgcatcaata acagtttggt ctgcattcac taaaccactc agcttaaact ttttaattaa
    14881 atcttgttct aatttatctt catcaatatc tgcccaagat ttaaatttaa ttctaggttc
    14941 atgtacatgg aagtataata atccacctgg cttcacaata tctgttaatc caaggcgttg
    15001 tttattttgt aaaacgatat ccatgtatgt catcatttgc atttgcatac cataatatac
    15061 tttcgttaaa tcaagtgtcg cactaccttc agaggattta tagtcaatga tattaacaaa
    15121 acttgtatca ttctttgtat acgtatcgat acggtcaatt tgccctctaa tattaattgg
    15181 aataccttga gttgtcgtta atgtttgtgc aattaattcg tcatttgttc ttggtttcct
    15241 tctaaaactt gtctcaaaat gttttggcat aaactttgaa tacgtgcctt gatattttaa
    15301 tgcgcttagt gttgtttcta caatagcgcc aatgcgtctt gataaataac gatagtaagc
    15361 tgaagaattt aataaattaa actgaacttt aggtaaaatt tgttccaatg cttcattcgt
    15421 taattgtctt atttttttca ggtctaattg tttaaaatcg ccattaatac gttcagatat
    15481 atattttaaa acggaatgga aaatatcacc taaatcaaag ttttgaagtt catacttcgt
    15541 tcgctcattt agtttaagac catgtgaggc atagtgttta aatgggcatt gttgataacc
    15601 ttcaaatcga gatacactgg cattgatttc cttaccatat aaatctttag acaacgtttc
    15661 acctaatttt acagtttcat tgtcaaacgt taatgctgac atcaaataat ctaaaccttg
    15721 atttaaatga tcgctatctc taattacttg ataagcatct aaccaactat cagccacaat
    15781 ttcatcatct aaccaagcac gcaatgcttc aaataatgta attttggttt gcttagcatg
    15841 ttgcattagt gacaatgggt taacttcatg gtattgagga atgttagtaa tttccaattg
    15901 gttgaacaat gattgaattt gatttaaaaa tgggctgatc tccttatcat caccacttga
    15961 tcccattaga ctgtaagaaa atgtaacatc tcccttagct ctagtcatag caacatagca
    16021 aacaaatgct tcatccatct gtaaaatatc tgatgtagga ctcaactcta catttgcttg
    16081 ttgttcaaaa tatttctttt cttcatcagt aattaaactt gatgcagtta ctggttgtgg
    16141 catggtgccg tcgttcattc caactaagta aacatgttgc ttattgtcga ctttagccaa
    16201 atccatcgta ccaatactaa cttgatctaa tgtttgtgga atcatgacaa attctaattg
    16261 ttctaaacca atatcaaata cttctaagaa acgttccatc gacattggtt catctccaaa
    16321 tactagaact aagtcatcaa ggatttgaat taagccattc catatttgat caatttcctc
    16381 cgccttttca tgattaccat ttaaatcaag ttcatctcgc tctgtcatca attgatttgg
    16441 cagttcgaaa tattccatac tttcataaaa agcagttgca aagtctttta cagtttccgc
    16501 ttgtgacatt tgcttttcaa aatgtaaaat tttatcaatg acatctttct ttaacttaac
    16561 gacttgttta aatgtgttac gttcatcttc ggtcagttta tgcgctttac gccccatttt
    16621 gctaaaatgt tcgacattaa atagctcatc atctaaccaa cgtttaccgt atataccacg
    16681 ttcaagtaca aaattttcaa gtaaatcaac taagtatgca ctttttagat ataatgccgt
    16741 taacacatca gtcttcaata agcgtagcat tggattcact tgccaattag attgaataac
    16801 ttcaatcaat gaacgaatca tttccatgac cggatgatgt gtcatcgaac gctttgtatc
    16861 aatattataa ggaatattat aaagcggtaa tatggaatca aataaataag cataagattc
    16921 atcacgatat aaaatagcaa tatcttgata tcgtaattgc ttatcacgaa tatcaacgat
    16981 gatacgtcgc gcaatttcat ttatttcctc tctcatagtc gcagattcta aaatattgat
    17041 atgaccttga catgccactc gattgatttg aagtgcatca aattcttgtt caagatgctt
    17101 taaatcttga ttattgaagc gatataattg cttgaaatat tgacgttcaa tagaaatatt
    17161 gagttcattt gctatttctt caatatgtcg taacacttcc gatggttttc taaataaact
    17221 aaattgatcg tggttaccat ctgtcgtcaa tataattgtg acactcttcg catatttaat
    17281 taatcctttg attattaaat actcaatcgt tgaaaagttg tgaaaaccat caatatatat
    17341 atcagcacgt tttagccact ctgatttcgg catacaatca ataaaatatt gtaatgaatc
    17401 ctcacccgta ataaactcgt tttgaatgcg ttgttcgaac tcacggtata ttaaagcaat
    17461 atcctctaac ttatttttag ttcgagtttg catattttta tcagcaataa agtgttctaa
    17521 atgttcaggc gttactgcat attttttaaa atcttgaatt tgttctgtta atttttcact
    17581 aaaaccataa tattttgctt gtgattgata aagttttaaa tacttttgtt gttcttgaac
    17641 aatgttataa atcatcattt ccgttgcagc tttagataac ttttgttcgc tataactacc
    17701 aacttcttgg aaaatacgat gacttaatcg ttcaaaatgc aacacttctg ttcttaaact
    17761 accatttaat tccggatcat tgacaaaggc ttgttctaat tgaaatgtac tttgagttgg
    17821 cgcaattaaa atgattggat ctccaagcgg atcctgtttc attttttgtt ttatttcggt
    17881 taacattttc gtagacttac ctgttcctgc tcttcctaaa taagcatgta atgtcatgac
    17941 aaaccctcac ttcctttgac acatatttta acacaaagtg attgtgattg atttattata
    18001 agttcatttc gaacttagct tttattgtgg tactaacaaa ataaaacatc gtttatcagt
    18061 attaaaaccg acaaacgatg ttttatttgt ttcatattaa tttttagtgt tttcaggatt
    18121 gaaattatgt ttaaattcac taaatggcca gaatctaaat gaaactttgc caacaatttg
    18181 gtcttcatca atgaggccaa acgcacggct atctttactt acttcacgat tatctccaag
    18241 cactaaatat ttaccttttg gaatgacatt tgatttagga ttcgcattcg gtaaatcttt
    18301 aacttggaaa gtcccagtaa tataatcacc ttgtttatgt tttaaattgt agtttaaata
    18361 tggttcatct tgttttttac cattgacata taatgtatca tttttatatt ctactttatc
    18421 accaggaaca ccgataacac gtttaacata gtcatcattt ttgtttgcat ggaagacaac
    18481 tacattacct ttttccaaac cacctgtttt atatccaata atgtttacag ctactcgctc
    18541 accatctttc aaagttggat ccattgattc acctttaatc atatatggcg taacaataaa
    18601 tttacctact ataaataaaa tgacaaaagc gactgcaatt gaaataatcc attccaataa
    18661 ttcttttttc aattttgaca cctcttttta agatttgaac tgaatcgtcc attttgaaaa
    18721 aggataatat ctcaaactta tattaccaat aatatccttt ttatcaatta aaccaaattg
    18781 tctagaatca tgctgattgt tatcataatc atttagcaca acaaaattgt taggcggtat
    18841 aatatctcca tctaattctt taaaattgcg caaactaaaa tctttaattt ttctgttctt
    18901 ggcataagat gcgtcaaccg gtcggtcatc acggtataat tgtccctgac gaaacgccat
    18961 tgattgacca ggtttggcaa taatccgact agtatatatc tcgttaccac gcctatatgt
    19021 aatgatatca ccattattca attgattaaa tgtaacttta attttattta caataacacg
    19081 atcccctttg ttaagggttg gtgacatatc attattcgga atgacatgac caactattac
    19141 aaaagtttgt acgaacagta caatgataat agcaagtatc aatgaaatca aatattttac
    19201 aacttttttc acgatgtcac tcctttttcg accccataaa atgctgttct aacttttttc
    19261 caacaatcca aaatacaacc aacacaacta acattaatat ccctcttaaa ggttgcgtta
    19321 aaattgtagt aatttctttt cctaaataac ctaaaataat tgttgaaact aactttgacg
    19381 atgccaaaac aatgaaataa tatttaggtc taatatgaga tagactcgct acaaaattta
    19441 ttaatgtatt tggcgtaaaa ggaaaacaaa gtaaaataaa caatgggatt aatccttggc
    19501 gatcaataaa actaatcaag cgttgaacag cagtacgttg tttaattcgc tgcatcctct
    19561 cagtgttcac ccatcgttta cagatcaaat agactgtaaa tgttccagaa attaatccaa
    19621 gccaactaat caatatacct aaaataggtc cataagcttg aatgttaatt aaaatataga
    19681 gtgctaaagg aaatactgga attatcgctc taatatataa caatataaat ccaggtaaat
    19741 aaccaaactg tcgaaatatc tcaaaccatt cttctacttg atgaaacgac aaatcatcaa
    19801 tccctttctt tggctgaaga taattattct tacattataa agttaattac taagtaaaga
    19861 aacattaaca tgtaatcatg ctaataaatc agtctctagt agtataacaa tattattgta
    19921 tgacagatgt tattttttct ttaattttct cttaacatct tgtcacatta gctagtaacc
    19981 tagttcttgc atataaataa aaacgaggtt gtcattacat ttttacattt gtaatgacaa
    20041 cctcgaaaat atgctttaaa tagttaacgt ctagttctat cttttcaaac ttcactaatc
    20101 tttgaagtaa tgtattttat aaacgttctt ctaattcttt tttcaagtct tcaaaaccag
    20161 gtttacctaa taatgcgaac atgttttgtt tatatgcttc tacaccaggt tggttaaatg
    20221 gatttacgcc taattggtat ccactcattg cacaagcaag ttcgaagaag tatacgacat
    20281 aaccgaaagt ttcttcatct aattgtggaa tgttcactac catgttagga acaccaccat
    20341 cagtatgtgc taataatgta ccttcgaatg cttttgtgtt aacttcgtcg attgttttac
    20401 cagctaaata atttaatccg tctagatcat cactatcttt ttcaatagta atatcatatt
    20461 taggatgatt tacttttaca actgtttcga ataagaaacg acgtccttct tgtacatatt
    20521 gacctaaaga atgtaaatca gttgtgtagt tggcacttga aggatagata cctttgaagt
    20581 ctttaccttc tgattcacca aataattgtt tccaccattc attaaagtat tgcatagatg
    20641 gttcatagtt aatcaacatt tctgttgtat aaccttttgc atataaaatg tttcgaattg
    20701 tcgcatattg atatgcaatg ttttcttcta atttatctga agataattct tcacgtgctt
    20761 ttgcagcacc aatcatcata gcttcgatgt taattccagc tgttgcaatt ggtaataatc
    20821 ctactgctgt taaaaaagaa tatcttccac ctacatcatc aggtacgata aacgtttcat
    20881 aaccttcgtt tgtagccaac tgttttaaag cacctttttc tttatccgtt gttgcaaata
    20941 tacgtttttg tgcttcttct ttaccgtatc tttcttcaac taattgtttg aacaatctaa
    21001 atgcaactgc tggttctgta gttgtaccag atttagaaat aacgtttaca gagaaatctt
    21061 tgtctgctaa ataatcaact aactctttcg tatatgttga tgacaagtga ttaccaacaa
    21121 atacaatttc agggtattca ttgctgtttc taaatgatga cgttaacatt tcgattactg
    21181 cacgtgcacc taagtaagaa ccaccaatac cgatgactac taaaacatca gaattttctt
    21241 taatgcgttt tgatgcttca acaattcttg aaaattcttc tttgtcgtaa tcaactggta
    21301 aatcaaccca gcctaagaag tcactacctg caccagtacc ttcatgaatt gttttgtgaa
    21361 ttgatttaac aatttcttgt tgttgtttta attcgtgttc accgaaaaat tctaacgttt
    21421 tactaaaatc taattgaata tgagtcatct ataaaagcct cctgtttcat ttaatatctt
    21481 aattttacta agtttacgtt tgcgattcaa ttcacaagtt tgtacttaat caataaaatt
    21541 gatatttatg tgacgtttca cacctatttt tcaacaaaca tttcaaactg gcgtcaaaca
    21601 ctcaaacatt ttttatacaa tttgcatgtt ttttaaaata cttttaaaca ttgataaata
    21661 agcatttata cttacaactc taactatctc tatcgcattt tatgaataaa tatgtaaaat
    21721 aatggtttta ttttcattaa aagtttgcta tcatgtgttc atacgaaata ttcagataac
    21781 tacaatgagg tgaattttat gaaagagaaa attgttttag catattcagg aggactagat
    21841 acaagtgtgg ccgttcaatg gcttatcgac aaaggatacg atgttgtagc ttgttgccta
    21901 gatgttggtg aaggtaaaga tttagacatc gtttataaaa aagctttaga tatgggagca
    21961 gttgaatgtc atattattga tgcaacaaaa gaatttagtg atgagtatgt aagttatgca
    22021 atcaaaggaa atttaatgta tgaaaatgca tatccattag tttcagcttt atcaagacca
    22081 ttaatcgcta aaaaattagt agagattgct gagaaaacaa attcagtagg tattgcacat
    22141 ggttgtactg gtaaagggaa tgaccaagta cgtttcgaag ttgccattaa agcattaaac
    22201 ccatcattga aagcattcgc acctgtacgt gagtgggcat ggagtcgtga agaagaaatc
    22261 gattatgcaa ttaaacataa tatccctgta tcaatcaacc atgattcacc ttattctatc
    22321 gatcaaaatc tatggggcag agcgaatgaa tgtggtattt tagaagatcc ttatgctgcg
    22381 ccaccagagg atgcgttcga tctaacaaat gctttagaag aaacaccaga tactgctgat
    22441 gaaatcattt taacgtttga taaaggcatc ccagttcaaa ttgatggcaa aacatatgaa
    22501 ttagacgatt taattttaac gttgaatgca ttagctggta agcatggtat cggaagaatt
    22561 gaccatgtag aaaatagact tgtaggtatc aaatcaagag aaatttatga agcacctgct
    22621 gcagaagtta ttttaaaagc gcataaagca ttagaaacga ttacgttaac gaaagatgtc
    22681 gcacacttta aaccaatcat cgagaagcaa tttgctgaac aactatacaa tggactttgg
    22741 ttctcacctt taactgatag cttaaaatta tttattgata gtactcagca atacgtaagt
    22801 ggtgatgtca gaattaaatt attcaaaggt aataccatcg taaatggtag aaaatcacct
    22861 tacacattat atgatgaaaa attagcaact tatacaaaag aagatgcatt taatcaagac
    22921 gctgctgttg gctttatcga tatctatggt ttacctactc aagtaaatgc gatgttgcat
    22981 ggaggctata gcaatgagca ataaagcttg gggcggtaga tttgaagtac aacctgaaga
    23041 gtgggttgac gactttaacg catccattac ttttgatcaa acgctcatag atcaagatat
    23101 cgaaggcagc attgcacatg caactatgct tgcgaatcaa ggcattatta gtcaacaaga
    23161 cagcgaacaa attatacaag gactaaaatc tattcaacat gattatcatc aagatcaaat
    23221 tcaatttagt gcatcattag aagatattca tttaaatatt gaacatgaat taattaaacg
    23281 tattggtgat gctggtggta agttgcatac tggacgcagt agaaacgatc aagttgcaac
    23341 agatatgcac ttgtacacta agaaacaagt gcaagatatc atcgcattaa ttaagtcgtt
    23401 acaaagtgta attgtagaca tcgcttccaa taatgttgat acaattatgc ctggttatac
    23461 tcatttacag cgtgcacagc caatttcatt tgcacataat attatgactt atttttggat
    23521 gttacaacga gaccaacaac gatttgaaga tagtttaaaa cgaatcgata ttaatccttt
    23581 aggtgcagca gccttaagtg gtaccacata ccctatcgat agacacgaga caacagcatt
    23641 gttgaacttt ggcagtctct atgagaatag cctagatgct gttagtgaca gagactatat
    23701 tattgaaaca ttgcataata tttctttaac gatggttcac ttatcacgct ttgcagagga
    23761 aattattttc tggtccacag acgaagctaa attcattaca ttatcagatg cattttcaac
    23821 tggctcatct attatgccac aaaagaaaaa tcctgatatg gcagaattaa ttagaggtaa
    23881 agttggtcga acgactggtc atttaatgag catgcttatg actttaaaag gattacctct
    23941 agcatataac aaagatatgc aggaagataa agaaggttta ttcgatgctg tccatacaat
    24001 taaaggttct ttacgtattt tcgaaggtat gattcaaacg atgacaatta ataaagaaca
    24061 actcaatcaa actgttaaag aagatttttc aaatgcaacg gaactagcag attatttagt
    24121 aactaaaaat attccattta gaactgcaca tgaaattgta ggaaaaattg tcttagaatg
    24181 tatacaacaa ggtcattatt tattagatgt tcctttagca acatatcaac aacatcattc
    24241 tagtattgat gccgatattt acgattattt gcagcctgaa aattgtttaa aacgacgtca
    24301 aagttacggt tcaacaggtc aatcatcggt caaacaacaa cttgatgttg ctaaacaatt
    24361 actatcacaa taaatacgtt aatctaccta cccacaatgt ctattaaaat tacattgtgg
    24421 gtattttaat gctctcttcg tcttgttgaa aatcacattt ttaagattcc taaaatgttt
    24481 gataattctt ttaaatttat attacagaaa tgttataaat tgtaaaagaa atgtgtaaag
    24541 cgttttcaca agcaggtttt tgtagtattt taaaattgtt agactacaaa taaagagatg
    24601 aaaggataaa gactatgact aactcttcga aaagcttcac taaatttatg gctgcttctg
    24661 ctgtttttac tatgggattt ttatcagtac ctactgctgg cgctgaacaa acaaatcaaa
    24721 ttgcaaataa acctcaggct attcaatggc atacaaattt aacgaatgag cgattcacta
    24781 ctatcgcaca tcgtggcgca agtggctatg cacccgagca tacgtttcaa gcatatgata
    24841 agagtcataa tgagttaaaa gcatcttata tcgaaattga tttacaacgt accaaagatg
    24901 gccatttagt tgctatgcat gatgaaactg ttaaccgtac aacaaatgga cacggtaaag
    24961 ttgaggatta tacccttgat gaattaaaac agttagatgc aggaagttgg tttaataaaa
    25021 aatatccaaa atacgcaaga gcaagttata aaaatgctaa agtacccact ttagatgaaa
    25081 ttttagaacg ttatggcccg aatgcaaact attatattga aacaaagtca cctgatgtat
    25141 acccaggaat ggaagaacaa ttattagctt cattgaaaaa gcatcacctt ttaaataaca
    25201 ataaattaaa aaatggacat gtaatgattc aatcattttc tgacgaaagt ttaaagaaaa
    25261 ttcatcgtca aaataaacat gtgccattag taaaattagt tgataaaggt gaactacaac
    25321 aatttaacga ccaacgctta aaagagatac gctcttatgc gattggatta ggtcctgatt
    25381 atacagattt aactgaacaa aatacccatc atttaaaaga cttaggtttt atagtacatc
    25441 cttatacagt aaatgaaaaa gctgatatgt tacgattaaa taaatacggc gttgatggtg
    25501 tctttacaaa tttcgctgac aaatataaag aagtcattaa gtagtattgt taaactagaa
    25561 aacataaata caaaaatata gctattacta aaaaagacag cagtaagata tttccgaata
    25621 gaaaatatct tactgctgtc tttttaatca actatatata gttgaccgtt taattagaaa
    25681 ttctctgtgt tcggggcccc ggctattttt gaaataagct tgttacaagt gtatttttat
    25741 tcagtcaact actgctaaaa taaaattaac gagcttaggg ctttgttttc tgtcccaagc
    25801 tcgttaaatc acatatgata attaattatg cccaaccacg atatctagct gcttctgctg
    25861 tacgtttaat acctatgata tatgctgcaa gtctcatatc tatttttcga ttttgagaca
    25921 attcgtaaat cgtatcaaat gccgcttcta atttttcacg tagcttttca ttaacttctt
    25981 cttcagacca ataataacct tgattatttt gtacccattc gaagtaagaa accgttacac
    26041 caccagcact tgctaatacg tctggaacta ataatatacc acgttcagtt aaaatacgtg
    26101 ttgcttctgg tgttgtaggt ccattagcag cttcaacaac gatgctagct ttaatatcat
    26161 gtgcattgtc ttctgtaatt tggtttgaaa tagccgctgg tactaaaatg tcacaatcta
    26221 attcaaacaa ttctttattt gagattgttt cttcaaataa atttgttacc gtaccaaaac
    26281 tatcacgacg gtctaataaa taatctatat ctaagccatt tggatcgtgt aatgcaccgt
    26341 aagcatcaga gatacctaca atttttgcac ctaaatcata taagaattta gctaagaaac
    26401 ttccggcatt accgaaacct tgaataacaa ccttggcacc ttcaatttgc atattacgac
    26461 gttttgcagc ttgttcaatt gcaataacta cacctagtgc agttgatctg tcgcgtccat
    26521 gagaaccacc caatacaatt ggtttacctg tgatgaaacc tggtgaatta aatttatcta
    26581 atgcactata ttcatccatc atccaagcca taatttgtga gtttgtaaat acatctggtg
    26641 ctggaatatc tttgttcgga cctacgaatt gtgaaattgc tcttacatat ccgcgtgata
    26701 aacgttcaac ttcatgaatg ctcatttgac gtggatcaca aacgatacca cccttaccac
    26761 caccgtatgg taagtttaca atgccacatt tcaaagtcat ccacattgat aatgctttta
    26821 cttcttcttc atcaacatct gggtggaaac gcacgccccc ttttgttggt ccaacagcat
    26881 cattatgttg cgcacggtaa cctgtgaatg ttttaacagt accatcatcc attcgtacag
    26941 ggatacgcac ttgtaacatt cttaaaggtt ctttaattaa atcgtacatt ccttcgtcaa
    27001 atcccaattt atgcaatgct tctttaataa ttccttgagt agaagttact aaattattgt
    27061 tctcagtcat gatccttttc gcctcttctt tacctaatga tttcgctttc aaacatattg
    27121 taacataacg tattcctttt taaagccctt acaaactgat tgttacaact ttttgacatt
    27181 attgaaatac gtgtcttatt ttttcaagtg caaggtccaa ttcttcttta gtaataatta
    27241 atggtggtgc aaaacgaatg acagtatcat gcgtttcttt acataataag ccttcttctt
    27301 tcaaagcttc acaatatggt ctagcacttt cattaagttc cacacctata aacaaaccac
    27361 gtccacggac ttctttaatt gatggatgat caatttgctt taattgttct ttaaaataat
    27421 ctcctaattc taaagagcgc cctggtaaat cctcatcaac gataacatct aatgcagcaa
    27481 ttgatgcagc acaagcaagt ggattaccac caaatgttga accatgtgag ccaggtgtaa
    27541 agacatctaa tacttcttta tctgctaata caacagaaat tgggaagaca ccaccaccta
    27601 gtgctttacc taaaatatag acatcaggtt ttacattatc ccaatccgta gcaaataatt
    27661 tacccgaacg acctaatcct gcttggattt cgtcagcaat aaataagaca ttatgttcat
    27721 cacataattc tctaattgct ttcaaatatc cttctggcgg tatatttata cccgcttcac
    27781 cttgaattgg ttctactaaa actgctgcag tattttcatt aattgcagct ttcaatgcat
    27841 ctacatctcc aaaatcaact tttctaaatc catctaataa cggaccataa ccacgttggt
    27901 attctgcttc tgaagataat gaaactggcg ccattgttcg accatggaag ttaccattaa
    27961 atgcaatgat ttctgcttta tttggctcaa ttcctttaac atcgtatgcc cagcgtcgtg
    28021 ctgctttcaa agctgtttct actgcttcag cacctgtatt cattggtaaa gctttatctt
    28081 tacctgccag tttacaaatt ttttcgtacc attcacctaa gttatcacta tgaaaagcac
    28141 gtgaaactag agtcacttta tcagcttgat cttttaatgc ttgaataatt ttcggatgtc
    28201 tatgaccttg gttaacagcg gaatatgcag ataacatatc catatattta ttgccttcag
    28261 gatctttaac ccatacccct tcagcttctg aaatgacaat tggcaatggt aaataattat
    28321 gtgctccgta atgatttgtt aactcaataa ttttttcaga tttagtcatc atatctcccc
    28381 ttttcatcat ttataactat tatacatgaa acattatcca aataattaca ttagttttca
    28441 aagcagatac ttttccacca aaaaagatga aataatcact aagtttcatt aattttgtct
    28501 attttgaaaa cccttacatt tataatgaca taattactta aatgattaca agcaaaagaa
    28561 ttgataattt tacacttaat caaaagtata ttttactaag aatattttta tttataaata
    28621 ttgaaaacca ctaacaaatt gtatacacaa tatcattagt ggtaacagtt aaacacttat
    28681 ttatctttac gtggtaatgg atagaaccct tcattaaatt gatgccataa attaggagtt
    28741 aagtgatgat tatcttctct ctctggatca aagtaattaa taatttcatc ttcgcgtcca
    28801 tctttaattt tctcaataaa ttgataatcc agtagtagct ctctaccaat agctactaag
    28861 tcaacaccaa cattttcaac tgcatctaaa gcttcgtcag ctgtgaaaat tgaaccaata
    28921 ccgataagtg gcatacgacc atttatccat ttgtgaatta aaggcagtct ttcttgtcca
    28981 gcgtatttac cttcacgtgt cgttgcatgc gtatccatca ttgaaacatg aatatagtcg
    29041 attggcatat ggctaatttt attaacgagt tcctctgtaa tttccattgt gattcctgga
    29101 gactccgctt cttccggaga caatctgtat ccaactataa agtctttatt gccatacgct
    29161 tctttcgctt taagcacttc ttcaatcaca gcgaccggga atttatattg atttgcccat
    29221 acatcatttc tactattata gtatggtgat acaaattgat gaattaagta atgattcgca
    29281 ccatgtattt caacaccatc aaaccctgct tcaattgcac gtcgcgttgc ttcaccaaaa
    29341 tccttgattg cttgttcaat ctcttcattc gtcatttctc tagcactatg ttcttgtttc
    29401 tgaccgaaac tttttaaaga aattggactt ggtgctacga cgtctccacc aggtgttaat
    29461 tcaggcaatg cttgtgcacc gccatgatgt atttgtacga gtgctttggc accgtttttc
    29521 ttcattgctg tagctaatcg ttttagtcct tcaatatcac tgtcatgcgc gattgatggc
    29581 tgtcctggaa atgcttttcc gacatcactc acattactcg cagcattaat tgtaatacca
    29641 acatcttgtg aacgcttttc aatataagga agttctacat ctgaaatagt accatcatca
    29701 tttgaagaaa tatgtgttaa aggggctaac acaaatcgat ttctcaactc tactccattt
    29761 ggtaattcta ctttatcaaa caatggttcg tatttacttt tcattactta attcctcctt
    29821 aaaattattg agttgactat aacatgtaat tttttcattc tccaattatc tgtttatata
    29881 gttgcaattc gtttaatact ttaagttgta gttctcattt ctaaaataaa ttaaaaaaac
    29941 aaatccacat acaatattgc aaatcaacga ttctatctat caaagataat ggatatgtca
    30001 ccttaaacca tttgtacgtg taaatagaat caatcatatt acgttatcgt agacaaaaag
    30061 agattagtat ctaataaaat ttaatagata ctaatctctt ttatagtcta agaaactttc
    30121 atttcagacc ctttgtatga ttttcggtac gatttatctg ttcctttagt cgtttcgaat
    30181 tgcttgcttt gactgtttta tccagattgg taagcgttct ttaagtgttt gaaacccata
    30241 tttttctgtt tctctgattt catctaatac tgattgtttt tccttcttac gctcataatt
    30301 tttgaagtaa tcattatcct ttaatgatag attaagcttt ccttcatcat ctatagacaa
    30361 aattttagct ttaacaattt ggccttctga tagaaatttc ttcaaattat gaacgtagtc
    30421 atccataatt tctgatatat gaatcagtcc ttcagtatga ttaggggtct caacaaacgc
    30481 accgtatggt tgaataccag ttacacgcac cttgatatgt tggccaattt tgtagttatt
    30541 caacttaata accccttatt tcgtttactt aacactatta tcatagcaca aatcgaaatg
    30601 gtggactaat taaaacatca aatcatacga atattatttt ataaatgaat aagaatacta
    30661 caaacttgga tttacaaata aaatcagcaa caaattccta tctaaatcaa tatgatatcc
    30721 agctactttg ttttcaattt attaactatt tgaatagcaa ttctctgtaa aaacataaaa
    30781 agcaacctca actattatct ttagaataca catctattta aaaactgtgc tttcttgata
    30841 aatatattga gattgctcat catgttagtt tatttgtttt cgttggaata tatactaatc
    30901 cattcataaa ttagctttat ccgagtttaa aatgttggta gttaattatg tttagatttt
    30961 attcttcaac atcaatagat tcaattacaa catcatgaag tggtttatct tgtggtccca
    31021 cttttgtatt tgcaatatct tctaatgtag tttcaccatc aatgatttga ccgaatacag
    31081 tatgtttttg atctaaccat ggtgtaccac ccttctcgcc atatgcatca acgattggtt
    31141 gtggccaacc accatctgca agttgactta acatattttg aggtacttct ttcatttgaa
    31201 caatgaaaaa ttgtgaacca tttgtattag gtcctgagtt agccattgat aatgcgccat
    31261 ataagttaaa tgcatttaat gaaaattcat cttcaaaagc accgccataa atactttcgc
    31321 cacccatacc agtagctgtt ggatcgccac cttgaatcat gaagtcatta atgacacggt
    31381 ggaatgttat tccatcataa taaccatttt ttgcatgtgt cacaaaattt tcaactgttt
    31441 ttggtgcaat atttggaaat aatttgaatg tcatgtcacc tttatttgtg tgcataacca
    31501 ctttaatttc accttgttgt acttctttgt ttaactgtgg atagttagcc atttatattc
    31561 tccattcatg ttatgataca tatatattaa catactttta agggaggaaa atagcatgaa
    31621 gttatatcga ttttcacaca aaacaggtag ctatggtgtc acgattgttg aagaaaatgg
    31681 agacgatgtc cttgttaaag ttgaacaagt tatcaaacac ccgaaacaag gtgatttaca
    31741 taaccctact gaaactgaag gtgtattttt ccatgaacgc aaagcattaa gccattttga
    31801 aaaacgctat acgaaacgtt cacaattacg cgacttcaat gttgatgtat tgcgctatga
    31861 agattcactt caacaagcaa ttacagattt agaaactaaa cttaaagctc agcaaacaaa
    31921 acatgctgaa atgtctttag ctagtttagc acgcttaaaa gaagattatt cacttcaata
    31981 caaagaaaat tttaaataaa aaatgacgtg tttcttctta tttaaatact tctgaaaata
    32041 aagcacaaca aggagtgtgt acgtttttca gaactatatc attcatgtat aatgaataac
    32101 ataaatattt tttaaaggag gacaacatag tgagtttgtt acatattgcg gtgatattac
    32161 cgttaatatt cgcactcatt attcctatcc tgtatagatt ttttaaacgt atacatttag
    32221 gatggttcgt attacctgtc cctatcgtca tatttattta tatgcttaca ttaattaaaa
    32281 cgacgatgtc aggtaatact gtaatgaaaa ccttaaattg gatgcctcat tttggtatga
    32341 actttgattt atatcttgat ggcttaggtt tactctttag tttgcttatt tcaggaatcg
    32401 gcagtttagt agtattatat tcaatcggct acttaagtaa gtcagaacaa ctagggaatt
    32461 tttattgtta tttattacta tttatgggtg caatgttagg tgtcgtactt tcagataatg
    32521 ttattattct atatttattc tgggagctaa cgtcattttc tagtttttta cttatttcat
    32581 tctggcgcga acgacaagca tctatatatg gtgctcaaaa atcgctcata atcacagtat
    32641 ttggtggtct atcattatta ggtggtatca tcttactcgc tataccaaca caatcattta
    32701 gcattcagta catgattcaa catgcttctg aaattcaaaa tagcccattc ttcatttttg
    32761 cgatgatttt aatcatgatt ggtgctttta caaaatctgc tcagtttcca ttttatattt
    32821 ggctaccaga tgcaatggaa gcacctacac cagtgagtgc ttatcttcat tcagcaacaa
    32881 tggttaaagc agggttatat ttaatcgctc gaatgacacc aatcttcgca gcatcgcaag
    32941 gttggatatg gactgtcaca ctcgttggtt taattacgtt attctgggct tcgctaaacg
    33001 caacaaaaca acaagacttg aaaggtatac tggcattttc aacagtatcc caattaggta
    33061 tgattatggc gatgcttgga atcggtgcca ttagttatca ctatcaaggc gatgatagca
    33121 aaatatatgc tgctgcattt acggctgcaa tattccattt aatcaaccat gcaacattta
    33181 aaggtgccct atttatgatt acaggtgcag tggatcattc tactggtaca cgtgatgtta
    33241 agaaattagg tggcttacta acaattatgc ctatttcatt tacaatcact gttattacag
    33301 cattaagtat ggctggtgta ccaccgttca atggtttctt atcaaaagaa tcatttttag
    33361 aaacaacatt tacagcaagc caagcaaatt tattcagtgt tgatacatta ggctacctat
    33421 tcccaatcat tggtatagtg ggcagtgtct tcacatttgt atattcaatt aaatttataa
    33481 tgcatatatt tttcggacaa tataaacctg aacaattacc taaaaaagca cacgaagtat
    33541 caatattaat gcttttatca ccagctattt tagctacatt agtaattgta ttcggtttat
    33601 tccctggcat tttaactaat tcgattattg aacctgctac atcttcgatt aatcatacgg
    33661 taattgatga tgttgaattc catatgttcc atggattaac gcctgccttt ttatcaacat
    33721 tagtgattta tattttaggt atcttactaa ttgtgacatt tagttattgg gtgaaattgt
    33781 tgcaacgaca acctggtaaa ctaacattca attattggta caacagaagt gcaaatgtta
    33841 ttccaaacta ctctgaaaag atgacgaata gctatgttac cgattattca cgtaataatt
    33901 tagttatcat ttttggtaca ttaattttat taacatttgt cactatattc tcagtacctt
    33961 tcaacattaa ttttaaagac gttagtccga ttagaatttt cgaagtttgt atcgtaattt
    34021 tattattaag tgctgccttt ttaattcttt tcgctaaatc aagattattt agcattatta
    34081 tgttaagtgc agttggatat gctgtgtctg tattgtttat attctttaaa gcacccgact
    34141 tagcattgac acagtttgtc gttgaatcta tttcaacagc attgttctta ttatgcttct
    34201 accacttacc aaatttaaat cgttataatg aaaagcgctc attccagctt actaatgctt
    34261 taattgctgg tggagttggt ttgtccgtca ttattatcgg tttaattgca tacggaaata
    34321 gacattttga atcgatatct aagttttatc aagagcacgt ttatgattta gctcacggta
    34381 aaaacatggt aaacgtcata cttgttgatt tccgtggtat ggatacttta ttcgagtcat
    34441 ctgtacttgg tatcgcagga ttagctgtat atacaatgat taaattacgt aaaaagcgtc
    34501 aaacgcaagg taacgaggtg aaaaatcatg aatagacaac aaaatgatct aattttgcaa
    34561 tttgctgcag ttattatctt tttcatggta atggtctttg gtttttcact tttcttagca
    34621 ggacattata cacctggtgg cggtttcgtc ggcgggttat tattcgcaag ttcacttgtt
    34681 atcattacga ttgcatttga tatagaaaca atgcgtaaaa ttttcccgtt agattttaaa
    34741 atcttgatag gtatcggatt agttttttgt attgcgacgc ctatcgcaag ttggttttta
    34801 ggcaaaaatt tctttacgca tgtcacattt gatataccgt tatttatatt agaacctgtt
    34861 catatgacaa cagcagtatt ctttgatttc ggtgttttat gtgcagtagt tggtactgtc
    34921 atgacaatta ttatttcgat tggagagaac gaatagtgga aattattatg atttttgtta
    34981 gtggtattct cacagcaatt agtgtctatc tcgttttgtc taaaagtctg atacgaattg
    35041 ttatgggaac tacactatta acacatgcag caaatttatt tttaataact atgggcggac
    35101 ttaaacatgg tactgttcca atttatgaag cgaacgtaaa aagctatgtt gatcctatcc
    35161 cgcaagcact tattttaaca gcaatcgtta tcgcctttgc gacaacagcc tttttcttag
    35221 tattagcatt tagaacatat aaagaattag gcacagataa cgttgagagt atgaaaggag
    35281 ttccagaaga tgattgaaag taatatgctt gtgttaacgc tagttattcc agtaattaca
    35341 gccatattac ttgtctttat tggaaagcgt cctattataa agcgttatgt cgcactaggc
    35401 ggtacattat taaccttggt cgcggcaatt atcaatttag caaatgttgt taaacatgga
    35461 ccaatacgcg tagagctagg ttcatggaaa gcaccataca gtattgtctt tgtattagac
    35521 atattcagtg ccctactaat aattactagt attattatta cagctattgt gattttatat
    35581 tcataccaaa caattggtat tgaacgtgaa agatattatt attatttttc agtactattt
    35641 atgttaatag gtatcattgg tgcattcaca actggtgaca ttttcaacct attcgtattt
    35701 ttcgaagtat ttttaatgtc atcttatttc ttattagtaa ttggttctac aaaaattcaa
    35761 ctacaggaaa caataaaata tgttcttgtt aacgttgtat cgtcatcctt cttcgtaatg
    35821 ggtgtagcga ttttatattc agtagtagga acattgaatc tagcagatat aagcaataaa
    35881 ttagctaacc tttcagcgca tgacagtggc ttagtcaata tcgttttcat actatttatc
    35941 tttgtttttg ctacaaaagc tggcgtattt ccaatgtttg tttggttacc tagtgcatac
    36001 tatgcaccac caattccaat cattgcattc tttggtgctt tgttaacaaa agttggtgtt
    36061 tatgcaatcg ctagaacatt aagcctattc tttagtgata atgtaagctt ttcacattat
    36121 gtcattttat tcttagcact attaacgatc atctttggtt gtgtcggtgc tgttgcatat
    36181 gccaacatta aaaaaatcat cctatacaat gtcatgattg ctgtaggtgt gatcttagtc
    36241 ggcgttgcaa tgatgacaga gtcaggtatg attggggcta tttactatac attgcacgac
    36301 atgttagtaa aacttgcatt attcttgctt atcggaatta tgattaaaat tacaggcact
    36361 gctgatttaa gacaatttgg tggcttaatt aaacgatatc ctgtacttgg ttggtcattc
    36421 tttatcgcag cattaagttt agctggcatt cccccactca gtggctttta tggaaaattt
    36481 ttcattgtcc aatcaacatt tgaaagagga ttttatttaa gtggtgtcat cgtcttatta
    36541 tcaagtttag tcgtattata ttctgtcatt cgcatattcc tacaaggctt tttcggtcaa
    36601 ccaaaaggat atgatcttaa taacaaagtc gacgtcaaat atttaactac gattgcaatc
    36661 gttgcagttg tgataactgt tttatatgga ttgtcagcag attacttata tccaatggta
    36721 aaagctggtg cagaaacatt ctacaatcca tcaacctacg ttaaagctgt attaggaggt
    36781 aaataacatg gctgtacaat tagtattaaa ctttattatc gcagtgtttt ggttgtttgt
    36841 aacaaatagt tacacaacaa ataactttgt gttaggtttc atctttggcc tagttcttgt
    36901 ttacctctta cacagagtgt taccaggtag attttatgtc atcacgctat atcgtattat
    36961 taaattagtt attattttct taatcgaact gattaaagct aattttgatg ttttgaaaat
    37021 tattattaaa ccttcgatta aaaatgaacc aggattcttt gtttatcaca cagatttaaa
    37081 aaaagattgg caaattgtct tgctgtctaa tttaattaca ttaacacctg gtactgtagt
    37141 gcttggtgta agtgacgatc gtacaaaaat ttatattcat gccatagatt tttcaactaa
    37201 agagcaagaa gtagaaagta ttaaaacatc attagagaaa attgtaagag aggtgggcga
    37261 aatataatga atcataatgt tattatcgtt attgcattaa tcatagttgt catttctatg
    37321 ttagctatgc tcattcgcgt tgtgctaggc ccatcacttg ccgatcgtgt tgtcgcatta
    37381 gatgcgattg gtcttcaatt aatggcagtt atagcattat tcagtatttt attaaatatt
    37441 aaatacatga ttgtcgttat tatgatgatt ggtatattag cttttttagg tactgcagta
    37501 ttctctaaat ttatggacaa aggtaaggtg attgaacatg atcaaaatca tactgattag
    37561 tcttgcactt atctttgtta tcatcggtgc tttaattagc gccctagcag ctataggatt
    37621 attgagactt gaagatgtat attcacgtgc acatgctgcc ggaaaagcat caacattagg
    37681 tgcaatgtca ttactatttg gtacgttttt atattttatt gctactcaag gttttgtaaa
    37741 tatgcaatta atcgttgcga ttatctttgt attaattaca ggtcctcttt caagtcatat
    37801 gattatgaaa gcagcatata atattaaaac gccttatact aaaaagacta aagtcgatga
    37861 aatttcggaa gacttaaaag acacaaaatt gtagattata taacaaaatc atgaatataa
    37921 atcaacaaca aacagcagta agatgattcc aaattaggaa tgattttact gctgttttct
    37981 tttgacattg ttacctcttt ttcaatggtt ttttctttga ctacagcttc gccctatcta
    38041 catatatctc tttaatttaa ttgcctttca tgtcgttatg tattatgata ataataatta
    38101 taaatcgtaa cgattacgct ttaaaaagag agaggtttta ttatgcattg gacaattatc
    38161 ggcggtggca tacagggaac tgcaatcgca caaaaactat tatcaagcgg attaacaaca
    38221 gaccgattaa caatcattga cccacacgaa actttttgcc aaaggtttaa ctcatttaca
    38281 aatcgaatag aaatgcctta tttaagatca ccgattgtac atcacgtaca tccacaaccg
    38341 ttccatctaa aacaattcgc taaacagcac caatatacaa atgcttttta tggtccttat
    38401 caacgacctg aattgacaat gtttatggat catattgcac atgcttctaa acaatatcaa
    38461 ttagaggatt gcttggttca aggtttagtt caaactttag ataaacaaga agacaaatgg
    38521 catatcaagt tagaagatgg acaaattatc actacagatt gcgtcgttat tgcaataggt
    38581 agtacaaata ttccgtttat gcctgacatt ttaaaagaca aacagaatgt aaatcatatc
    38641 ttcgagaaag aacatgatca agtagtatat gataagaccg atcatatcgt tggtagtggc
    38701 attacggctg cacatcttgc acttaaattg ttaaatcatg ataacgataa aaagattcat
    38761 ttatggctaa ataaagatat tgaaatacat gactttgatg ctgatcctgg ttggttaggt
    38821 ccgaagaata tgtctacatt tttaagtact aaaagcatgc ctgaaagaaa tgccattgta
    38881 caacgtgaac gtcataaagg atcaatgcct cacgaactgt acttacgcct taaaaaacat
    38941 attaaaaatg gtcgtataaa tgtgcataaa acacctatca ctcaaattag tgatggttta
    39001 attaacactg aaaatgattc tgttccatat caacagatta tggttgcaac tggttttgaa
    39061 caagatttta tgtcacaacc acttattaag caattaatac aaaattatga tgcacctatt
    39121 aacgaatgta attaccctgt tatttccgaa aaattagaat ggataccaaa tctatttgtc
    39181 gcaggatgct ttgcagactt agaattagga ccatttggta gaaatgttat gggtggccgt
    39241 aaagctgccg aacgcattga acaagcattt ctaaaactac aacaatatag cgcataaaaa
    39301 aactgctagc cgtagttatg aatatctcat aacatttcag ctagcagttc ttttatttta
    39361 aaggtttaat agcaactgta ccacgcataa ctgtaattaa ttgttctttg tcattcttaa
    39421 tttttatatc ccatacatgt gtcgacttac cttgatgaat aatttcagct gtcgcagtaa
    39481 cacgaccatc tttagcagaa tgaatatgat tggcattcat ctctaaacct aatggaataa
    39541 atttggttgt atcaattaga ttagcagatc ctaatgaaca tgctgtttca cctaaagcaa
    39601 tcgaagcacc accatgtaaa tatccaaatg gttgttttac tttatcagta acaggcatag
    39661 aaataacaac taaaccatct tcctggtgat ctattgacat ctcaaatgtc tctaataaat
    39721 gcgtcatatt ttcacctctt tatgcttata gtaccatagc agcaatagta ccgaaaatca
    39781 ttaaaggaat attataaaac aagaagtttg gtacacatgt atcgcgtata tgatcatgtt
    39841 ggccatcaac atttaatccc gcagttggtc ctaatgttga atcacttgca ggtgaacctg
    39901 agtcacctaa tgcactcgct gttccaatca atgcgattaa tgccattgta tctagtccaa
    39961 ttgacgctcc aaaaggaatg aataatgatg cgataatagg aatggttgca aatgatgatc
    40021 caatacctaa agtgacaatt aaacctatca catacatcac gataatgcta aataatttat
    40081 tatcaccagt aatacttgtt aaagttttaa ctaattcatc tatatcacca gtagcattca
    40141 ttacaccagc aaatccattt gctgttaaaa taactacacc aatataagcc ataattttaa
    40201 taccttcaac aaacttagca tctaattcat accaattata tgcacgtgaa ataaagaata
    40261 cgagtacccc ggccagtgca ccaaaaatca ttgaatctgt aaatgtttgt actaaaaatg
    40321 tagctagtat tgctacaatt gttactatta agatatatgg ttttaactct gtaacattgt
    40381 cactatctga aattttacgt gtttcatatt cacgtggttt acgatataca tataaaccga
    40441 taagtaagcc aacaatatac cccattgaag gaataagcat tgctttccaa atcatattaa
    40501 actcaattgg gtgattcgcc tttgcaaagc cactttgaat aatttgctgg aaaatttgac
    40561 cgaatccata aggtaataac acatacggga aacataaacc aaaaccgata atcaaaccga
    40621 ttaaacgtct atctattttt aagtcattaa acagacttaa caatggtggg atgacaattg
    40681 gaatgaatgc aatatgtaca ggaattaagt tttgactcat gatactcata gctaataatg
    40741 caataattat tgtcactttt actttaactc ttgaccatcg actattttca gcgtgtattg
    40801 catttataat ttttcctact aaatagtctg tgataccact gtatgaaatt aatgctgcaa
    40861 atccacctaa taaggcatag cttaatgcta cctcagcacc atcgactata ttttttccga
    40921 atacattaat tactttttca atgctcatac ctgatactac gccaccaact agcgcactga
    40981 taaataagct tataactacg tttaatcgac ataaacatag cacaatcatt aaaattactg
    41041 ctattactac tgcatttatc atatgacaac catcctttat cactctatcg aactaaagcg
    41101 tttatagact acatagtatc agtagcttta acacctgtca atagcaaact ataccaataa
    41161 tctttatttt ttagttaatt gtctttctta aaataatttt atctttcatt aaattaaaca
    41221 attttacaag cttggaacac caatcaaaat actaagttct aaaatgtaat attagtagtc
    41281 gttgactgaa tgaacatatg cttataatat ttttttgcaa tgctagtcaa gttgatttat
    41341 gctcacaagg atatgcgatt tatattttct tacaacaatg aaaatgcctg atacaatgcg
    41401 atcctttata ctttcaagag ttaaattaga aatgtatatc aagacacaag ttgtatcagg
    41461 caaataatta aattattgtt gttttaacca ttgtactatc gtcggaatca taaatcctgt
    41521 tggccctttt ggaccattat atgaagcttt attagtcgtt gctggacctg caatatcgaa
    41581 atgaatgtga ggtgtttgac cactaaaatg tgttacaaaa cttgccgcaa atagcgcttt
    41641 accttgtcca ttcgtatggt taactaaatc agcgatatca ctgtgtttaa tacttgcacg
    41701 ttcggttgca gtaatcggta attcaaatac catttcatcg actttagaac ttatttgtaa
    41761 tatatcgttt aatatcactt tactattcga ttcaaatgca gcagctttat catcgcctag
    41821 tgcaacaatt gctgcacccg ttaatgtagc aaagtccata atcacactag gctgatattg
    41881 atttgcataa tacacagcat ctgcaaggac taatctacct tcagcgtctg tattcattac
    41941 ttctacagtt tcaccactta atgctgtaaa tacatcatct ggcttcattg atgcttcatt
    42001 tatcatattt tcagcacaag caagcactcc gacaatattt acaggcagtt gtaaacgact
    42061 agccgcttca atgataccaa cgacattcgc agcgccacac atgtcaaact tcattgtagc
    42121 catgccattc ttcgttttaa tactataacc accagaatca tacgttatac ctttaccaac
    42181 taaggcaatt ggtgcttcat ctttgtcttt gccattatat gtgatggtta ctaatctcgg
    42241 tttatgctta ctacctttac ctactgcttg taaaagtccg aatccttcag aaactaaagt
    42301 gtcataatct ttaacatcta ctttgacctt tgtattttta aaatgattaa caatatcttc
    42361 tgcaaatgtt tgtggtgtta atacattcgg tggcatatta ctaaagtctc ttgccaaatt
    42421 aatggattgg ccaatactga taccctcatg aatgaaatct aattcaatta atgattcact
    42481 aataaggttt aaattcgtct taaacggtgc cttcttactt gatttataat gatcgaattc
    42541 atatgttgca cgctcacttt gaataccgca tgccattaat acatctgata actgatcata
    42601 ttttgaaata aatgaatcca taagtaaata agtatcttca atgtgttctg actttatgta
    42661 ttggaaaaga tgtccccata ttttcaacat atcttgataa ctacgtgctt ttaagtttcc
    42721 taaaccaact gtaattaaac gatatgtttg atcttgtaca tcaaatgcag ttgtataaat
    42781 cttcccaact ttactaccaa taatatgttg atgttttagt ctttcaagtg attctgtaat
    42841 atcgatatga ttaaaactaa tgcgctctaa ctgatttaaa tgttctggta taccaataat
    42901 caatgtattt atttcgttgc ttagtgtgtt atttaattta aaattcataa tgtacctcct
    42961 tagatttgat atgttactca cttcaaattg tacaacaata aagcccttca gtgacactga
    43021 aggactttat aaatgaataa tttaatttta tgtgtttagc tgaaacttta tttaaagcct
    43081 agaatttacc ttttttgaat gctaaaccga taccaccgat tttgaatacc gcacgtgtat
    43141 caatcacttt tttcatgaat gctgcttttt taccagcgat aggtttacca aataccatac
    43201 ctacaccgtc atgtgaacct aaagaacaaa cagttccacg atcaacgtat tcgaattctt
    43261 cagttgattc accgtttaag atgcgtttaa tgtttttagc aacactttca ccttgttgca
    43321 ttgcaatttg tgctgtagtt ggtaatggac gttcttctcc agctgggata aacgctgaac
    43381 agtcaccaat aacaaaaatg ttgtcgtaac cattgattgt taaatcttgc tttgtaacga
    43441 tacgtccacg tttaacgcct tcaaatgatt cttccattaa tttactacca cgtacaccag
    43501 ctgcccatac tgaagtacct gcatttaatt gttgtttttc accatctact tcaactacaa
    43561 aacctttttc gttacaagca acgattggtg tagcaatttt aaattcaaca ccgcggtctt
    43621 ctaagtagct aactgcgtgg ttaactaatt cttctgagaa cattggtaac attttaggtg
    43681 ctgcttcaac acaagtgatt ttaactttat tttgatccac accatatttg ctacataatt
    43741 caggaattct gtctgttaat tcacctaaga attcaacacc agtgaatcca gcaccaccaa
    43801 ctaagataga taaatcgtta tcatcttttt cttttgatgc tgcatagtta gcaaatttgt
    43861 cttcgatatg acgtgataat tcacgtgctg tgataacatt ttcaatttgg aaagcatgat
    43921 ctttcatacc ttcgatgccg aatgtttcac taacgaaacc taatgctact actaaaatat
    43981 caaagtcata aataccttga tttgtttcta cctttttagc atcacggtca atttttgtta
    44041 cttctgcttg aacaaagttc actttgtctt tcttcaagac actttccaca ggatataata
    44101 catcttcata gtttagtgta cctgctgatg cttcatgtaa ccatgttgct tcatagtgat
    44161 attcattttt attaataagc gtaatttctg cttcttctgt tgatatcgct ttttgcaatt
    44221 tagttacagt ttgtaaacct gcataaccag caccaagtac aagtactttt ttacgatctt
    44281 gagccattta atttcaccta agctttcata tttttttaac caaatgctga taattactag
    44341 taacaactgg tcattactac ttttaccaca atgtatacta gtttatcatc attttgttat
    44401 ttaagtcttt taaattatgt aaaaacctgt gatgttcaca aaaaagacat ttttaatcca
    44461 atactaattc tatagctttt atgttatatt ttcaagcaag attcagtcag attgtgaaaa
    44521 aattaattaa ttttttcgta gcctgatttc gattaaaaat gtatccgtta tcacgatcat
    44581 ttaaaatact atttatagtc agattcttaa ttttcaataa gctttttaat aaaacaaaat
    44641 atctttacgc aaaaatagga cataatcaaa tatgtcccta atcataattg atatcaattt
    44701 gtatcccaaa aattgggtta accattaaaa agttatttta ttagcagttt tcaggattac
    44761 ctgcaacttt tgcagttcta aatgaactac cacagccaca tgaagcaatt gcattaggat
    44821 tgtcgatttg gaaaccgcca cccattaatg attgcttaaa atcaatagtc gtaccattta
    44881 atacgggtgc atcttttttg tctactaaaa cttttaatcc aaagtattct aagatttcat
    44941 cattttcacc aggcgcttct tctgcaccca taccgtatgt taaaccagtg cacccgccac
    45001 cattcacttt aatttttaaa tagccatctg gcatttcatt tgctttaagc atatctttta
    45061 cttcgtaagc agctgcttct gttaatataa ctgttggcat gataactcct ccttaaaaaa
    45121 tccaagtttc ttttatatgt gcatatatat tttgtaataa ttcttccggc gaatcacctt
    45181 caacaatatc accatttact aaagcataca acccggctga acatatacca caatgtgtca
    45241 ggcaaccata ctctaacaca tcgacatctg ggtcattttc cagttgatta aaaacataat
    45301 ctccaccttt tgccatgtta gagagacaaa attctacgat cggattcata cttcaccttc
    45361 ttatttcatt tgttacaata ttatagcatt ttaaaactgg tattttaaca tgatgtgctc
    45421 aattacaaca actgatgttt cttatcccag ttatgtaata gtgccttagt tagtacaaat
    45481 atttatttgt agtcattttc aaaaaaatat ataataagca tataaataca tatttacttt
    45541 tttaggggtt attgatgaat caaagacact tgcattttat aactgttcat taacaaatat
    45601 atctatgcac tttgatcttt tcaaaattaa agtaaatatt aacatataaa aggggtactt
    45661 cattatgaaa aacttagttt tgttaggcgg cggatatggt aatatgcgta tcatgtcacg
    45721 cattttaact acttctttac cacaagatta tacagtcaca ttagttgatc gtatgccatt
    45781 tcatggattg aaaccagaat tttatgcttt agctgcgggc acgaaatcag ataaagatgt
    45841 tcgcatgaaa ttccctaatc atccacaagt gaatacagtt tatggtgaaa ttaacgacat
    45901 agatttagat gctcaaattg tctcagtcgg taactctaaa attgattatg atgagctaat
    45961 cattggttta ggatgtgaag ataaatatca taacgttcca ggagccgaag aatatacaca
    46021 tagtattcaa acactctcaa aggctcggga tactttccat agtattagtg aactaccaga
    46081 aggtgctaaa gttggtatcg ttggtgctgg attaagcggc atagaacttg ccagcgaatt
    46141 aagagaaagt agatcagact tggaaatata tctttatgac cgtgggccgc gaattttaag
    46201 aaattttcca gaaaaattaa gtaagtatgt tgcgaaatgg ttcgccaaaa ataatgttac
    46261 cgttgttcca aattcaaata ttaataaagt tgaacctggt aaaatatata actgtgatga
    46321 acctaaagat attgatttag ttgtatggac agcaggaatt caacctgttg aagttgttcg
    46381 taacttgccg attgatataa atagtaatgg acgcgtgata gttaaccagt atcatcaagt
    46441 accaacatat cgtaacgtct atgtagttgg tgattgtgct gatttaccac atgcgccaag
    46501 tgctcagtta gccgaagttc aaggtgatca aattgccgat gtgcttaaaa agcaatggct
    46561 aaatgaacca ttacctgaca aaatgccgga actaaaggta caaggtatcg ttgggtcatt
    46621 aggagataaa caaggttttg catatatcat ggatcgcact gtaacaggac gactcgcttc
    46681 tattttaaaa tccggcgtac tttggttata taaatatcat aatggttaaa attaaaaagc
    46741 aatgtcagtt cacactatta ctgacattgc tttttgttat gtgtatatta ttcattcaca
    46801 agcttttggt ctataaatcg agtgatttgc tttgtttgta tataaccatc tgctacatat
    46861 tcatcgttca ttgtaattaa tggataaaat agttcatctt gttctattct ttcaataaat
    46921 tgtaaatcat gatctgttaa gttgtcatta tcttttgtaa tatctatata cgtatattta
    46981 aatgatatat ttgggtattt tctttttaat agcggctgta gccagtcata aatatctttc
    47041 gatgttggcg cattaacgca acttgcacat ataacatctg ccccatatac taccacactc
    47101 acgtgctcca tatatttatc ccccattggt ttgatagatt tttattacac tatctattat
    47161 aatatactaa taaagattat caaattcatc tctcgaaagg agacttgcct gatgcctact
    47221 gaagatacaa cgatgtttga tcaagtagca gaagttattg aacgtcttcg cccattttta
    47281 ttacgtgatg gtggcgactg ctcattgatt gacgtggaag acggtattgt taaattacaa
    47341 ttacatggtg catgtggtac atgcccaagt tctacaatca ctcttaaagc tggtattgag
    47401 cgtgcattac acgaagaagt gcctggtgta atagaagtag aacaagtatt ctaatataaa
    47461 gatattaaat taacagaaca tattatgaat aacaacaaag acaggaatac tgaattattt
    47521 ataatcagtt attacctgtc ttttttcgct gtcaaattgg actgatggga aagttatttt
    47581 atactattta tctgattaat tattttatta ttgccacata tccaagcgca tattactatt
    47641 ctatgaaatt taaaatataa aaatagcaca tacgctcaat caaaatcgtt gagttatgtg
    47701 ctatttgtat tttaattttt aggtttatct acttcaggtt gtggttcacc tttcatatgt
    47761 ttcgcaattt gctcatccat ataaacccaa cctttccaac cgatgtgtac ggcatcactg
    47821 ataacatatt tttcataatc tttatcagtc atatcgtaaa ttttaccacc attatctaca
    47881 acagtagaat ggattttttt atacactgct tgacgacgtt ctttatcgat acctatgtgg
    47941 tcataccata caccgtttga tggaatactt acatattgaa catctgcacc agcagcacgc
    48001 attgttttta caagtaattc taaatcttgg aattctggag aattaacatt gaattcgtag
    48061 tcacgtctaa ctttacgctt actttcttga attaatttcc agtattgatc tctaatacca
    48121 aatttattcg atgtagtatc agctttacca atttcaactg ctttttgttt catctcatcc
    48181 caagaagcgt ctggttttgt agcaggttta acatgttcta atggagattt atccattgca
    48241 aacaatgatt taatcgcttc tattttaatc aattgattct ctttaaaacc agaaatataa
    48301 ctatctttag tttctttagg gtttttagca taagatttca agtattcttt attgtgtaca
    48361 tgtggaaact gtaataaacg ttgtgcataa cgacgtttta attcagtaga catgtttttc
    48421 tgctggaaca tttgattaat ttgagtttga gacatacgag catcaaagtt ttgattcgtt
    48481 aaaccatggt ttgtaaacca ttgtggtgaa ataataaatg ttaatttctt accttttaat
    48541 ttatcatact gtgatgcaag ttcaactgcg ttaattaagt ctgtagaacc accagcacct
    48601 aataagaatg cttttttgtt ggcgttatgc ttatttaatg caattgcagg attaaatggg
    48661 tcatctttac ctaattcact agagccgtat ataggataat acttgtttga ttcgtataac
    48721 ttatcttgaa tgagtgtgcc ttttagtact tgatctgtca atgtagttct attatcttct
    48781 acagtctttt catttactaa tcctgtaaac caactagcag gtaataatag aaatacaatg
    48841 aataccgctc cactaattaa aatgggtaaa aaaggtttta atttcatcgt aactcttcta
    48901 atgcttcaac gattttattt ggtgttgccc actcatctct atcaaagtcc ataatagata
    48961 cttcgatatc aagtttattt tgaatctcta ataataatcc aactgtttgg aaagaatcaa
    49021 taataccttc ttcaaaaatt tctacgtctg gattttcttt tacaatatcg ttttctgcta
    49081 cttctgctaa taaatttaat acttgttctc taaattccat aattaaattc tcctttatta
    49141 tataagttta cctgagaaga ttaaaaagcc aaatgttaca aagtggaatg tgatcacaat
    49201 gctaagtgct gttgtgaaac cattttgcca acgtggcgga tgtttcttgc gccaacgttc
    49261 ataatagcca taacctataa acaatgctgc atggtataaa ccataaacaa tgtaatacac
    49321 ttcgatacca tgccaaattc ccattatgaa gaagttgatt aagaatgcca cgttagacat
    49381 tgcaaattga ctcttcaata attttttacg agacatgtag aataaagatc tcatgtaaat
    49441 acaatctctg aaccagaatg ataatgtcat atgccatcta ttccagaaat ctttaatatt
    49501 tttcgctttg aaaggtttat cgaagtttgg tggtgtttta ataccgaata aataactaaa
    49561 tgctatcgca aataaactat aacctgcaaa gtcaaagaat aaatataagc tgtatgcgta
    49621 catatataac cacaaattga caaaaccatg taagtctaat tgtaacggca tgattgcata
    49681 tgtgttaata aagtaagcaa caatatattt atacaagaaa ccaagcataa tcatgtgaat
    49741 tgcttttaat actaattcac gatattcatt gcctgttggt acttttttat cgtctttaac
    49801 gaaacgtttg taacggtcga ttggtccaga tgaaatcgtt gggaagaatg aaataaattg
    49861 aattaatttc catactttaa tttctttgat agaaccatca cgaatttcca taattaactg
    49921 cacacttttg aatgtaacat aagaaattcc taagaaacca acaaattcaa ttaatttgct
    49981 ttcatggaag tgaatctgat gcccacctaa ccatgtactt tgtaacactt tcacaagtgc
    50041 taatggcaat attgataaaa ccattacagt tacaaatttt gaaaatgaat tattttttgg
    50101 ttttgaatga taataaaaca ttatcaataa aacttgccat acgacgtaaa taataaaact
    50161 aattaattga acacttaaat acttttggtc aaacagatta tgtttatcag aagaaaagat
    50221 taacacaatc ataaatgctg taactacgcc attataaatg taacttcgct tacctaaaaa
    50281 tccaagtata atgactggta ataatgcaat taaagcaatt aagaagaatg taaaatcacc
    50341 atatggaatc atccgttaat tacctctgca attttctttc tgtcaatttt accatttgaa
    50401 gtcaatggta attgttccat ccattcaaac tttctaggaa tcatatactc tggtaagcgt
    50461 gatttcaagt catttttaat atttttagtc atttctgaat tgtccgtaac ttcagtcgtt
    50521 ggcacaattg caccaattaa atgaataact ttatcatttt tatatacagg tacaacaatc
    50581 gcttctttta cgaactcaga ctggcgtaat tgtgtttcaa tttcttctaa ttccattctg
    50641 tagccattca atttgatttg gaaatcaata cgaccttgaa tgaaccattg accattttca
    50701 aacttcgctt tatcaccagt gtgataagta cgaataccgt catcgaaatt aaatacttca
    50761 gctgtttttt ggtcattttt taagtatcct aaacttacac tttgaccttc gataacaagt
    50821 tcaccttcat ctgtagtaga taattttgcg cctggtcttt caacaccaac aggtaatgtc
    50881 ggatattgat ctaagatttc ttgtgtaatt tgaatacttg taactgctac cgtagcttca
    50941 gttggaccat atgtgttgta aatcgtcgca cttgggaaac ggcttactaa cgcttttgct
    51001 gctctgtgag gtagaatttc accacagaag aagaattcgt taagactact atactgttct
    51061 tcattaagcg ttggtaataa taaacacatt tccataaatg atggtgttga tacccaaatg
    51121 ttaatcggtg ttgctgttag catttcattt aataatttag gtttattaat catgttttta
    51181 tctacaagat ttaatgtacc gcctgatgct aaacatggat aaatagccat tacagataag
    51241 tcaaatgaaa atggcgcttg gttaagccat tgttgttcat ttcctgattt attaagttct
    51301 aacatccact cagtaaattg aactaaactt gcatattcaa tttgaacacc tttaggttcc
    51361 ccagtagaac cagatgtaaa gattgtgtat actgtgtcgt tatctttaat ctgactatca
    51421 aaaattactg ggtcttgaga tgttttaata tcttctattg taaatacttc gcctgctaaa
    51481 ctttcaaatg attcatcagt cgtattaaat acaaactctg gttgaacctt gttaataatc
    51541 attttaatac ggtcttcagg aattgaagtg tctacaggta catatccaca tcctgcttta
    51601 atggcaccta tcatcccaac aatcatatat ggtgacatgt gaccgaataa aatcatcggt
    51661 ttcttactac cttgtaatcg atgtgctaat ttactagact catccattaa ctgttgataa
    51721 gttaattcat cagttgtgtg tctaacagca atgctttgtg gatttgcatc cgcaaacgct
    51781 tgcagcttat taataatatc tgtcatatta agtctccctc attagaactc attataaatg
    51841 aagttattgt gtgtgtcgcc actgccataa attaaatata aagtaataaa tattgccaaa
    51901 tacaatagtg ttaataaata tggtttgaat gcttcaacat atttattagg tggctgttta
    51961 cttttagatt tcatattgca cctcttaaag ttcttagtaa aaacgccttt ataaagaccg
    52021 ttcaatataa aatacgtttt aaaatttgtt ttttacaatt cattatatcg atattcataa
    52081 tgaaattcaa ttttaatttt atagattcaa catagtaatt ggttgtcatc actcaattat
    52141 tgtaaatgat acactatgtt gagaacatca ttcattttaa aggttattta aacaataaac
    52201 aattacagtc tatataacaa ttttgttata tacgtcaaaa atcaaataaa ctcatcacat
    52261 taatatgacg agtttataat gttattgaat tatcatcagc gcaaatatat acattcgcaa
    52321 gtcaagcgta acatatttaa caattgcttt gcttgtttta ccaatgatta aaaaccatac
    52381 ttattttcaa tttactggag tatgtggtac ctgatttgtc ataaccgctt ctatattatt
    52441 aatacataat tgaatcatat tgtcccgtgt tgttactgat gcactaccaa tgtgtggtgt
    52501 aatcagaaca ttatcacgtc ccattaatgg atgtgtatga tcaatcggtt catttgctaa
    52561 tacatctaaa ccacatgcta aaatttcttt attgtctagt gcatcgatta atgctgtttc
    52621 atctacaatt tgccctctac cgatattaat aaaaattgca tcatttttca tttgttcaaa
    52681 tgcttcagca ttaaatttat gatgtgtttc ttttgtaagt ggcgctgtac agatgataaa
    52741 atcactttct gctaacagct tttcaaaaga aacatatgtt gcattaaagt ccgcctctgc
    52801 atctttatgt cttgatcgat tatgataaag aatattagta ttaaaccctt gcaaccttct
    52861 tgcaaaagct ttaccaatat ctcccatacc atatattcca atagttgaat tgaaaacatc
    52921 tttacctgac aataaataag gaccccagct ttgccatgca tctgcttcta catatttttc
    52981 agcttctaca atacggcgtg ctatagcaag cattaatgta aatcctaatt ctgcagttgt
    53041 ttcagtaagt acatttggtg tattcgtgac aaccacgtta ttcgctgttg cactttcaac
    53101 atcgatgttg tcatatccta cagccatatt cgcaattact tttaaatttg gtgattgtgc
    53161 taaaatttct gcatcgatct gttcacttaa tgtgataaaa caagcatctg cgtcacgaag
    53221 tgctgtcgca aattgatctt taggcatagg cactaatgat ttttgccaca taacaacgtc
    53281 accaagttta cttaattgtt gataaaattt atctggaatt ttcctcgaaa caactatttt
    53341 taccaaatca attcacctac tttataaaat gactacatat atttttctaa ttcagctatt
    53401 gcttcattta aatctttaaa agaatacgtt ggtggcacat ttttattttg cacatcttct
    53461 aacgtagata cacctgtttg tacatgaatc gtatccatac ctacgttaat accagacata
    53521 atatcggtat cgtacaaatc gcctaccata gcaacttcgg atttatctaa tcctaaaatt
    53581 tctaatgctt taaccataat gattggttct ggtttaccaa taaattgtgg cgatacgcct
    53641 gtcgatacac ttacaacact tgtaatagca ccattcccag gtaaaaatcc tcgttctttt
    53701 ggaattgaca catctggatt tgtagaaata aatgttgctc catttcttac acctaacgtt
    53761 gcaatcgcaa gcttttcata tgtaacttgt tcgtcaagtc caataactac ataatcaaca
    53821 tgctcgtcat ttttaatgac aagtcccgct tcggttaacg cagtatttaa accactacca
    53881 cctaacatat atactgatgc tcctggtgat tgttctgaaa tataatcagc agtggctaac
    53941 gctgacgtta caacctcttc tggtttagca tcaatgtgca tttcacgtaa tttttcagtt
    54001 acttgctcag gtgttttcgt tgaattatta gttacgtata aatgaggaat gccttttaca
    54061 tttaaataat cgatgaattg ttttgctcca tcaatctcat ctgttcccat atacattgtg
    54121 ccatctaaat cgattaaata cgctttatac tgtttcatta ttgattttct cctttaccaa
    54181 aagctgttac tggtacattt tcttgatgta aaaatgtcgt tacttctgta ataaattgtt
    54241 tgtaataagg taatgcgtca tcaaacattg gcatgataac cttaatatct aaggctgtgt
    54301 aatcatatgt aaattgttta cgaatatcga cagttttatt aatcgcctgc tgtgtttctt
    54361 tagtaataac attttctagt tctaatatat caatcacatc tttataatta ccaggatccc
    54421 ttaaaataaa tgcatcgata atcatattcc ctatatctac cgatgattct atcaacattt
    54481 gagcaatgcg ttcaaatgca taatgattgt gcttgctctc atggtaatca tcagttaatg
    54541 cttgtaaata ggctaatttc tgagttagtt tatctttgtc tacaaaatac attccttgtc
    54601 acctctcgct tatatattat cataattttg cagtatactt catttgtcgt tatactaact
    54661 ttactacttt taaaaggagt cgctacaaaa tgattgatat gtatttatat gatgacaacg
    54721 aagagagtca agttcagttt gttggttttg ttggcgagca tagtcgatat gatttaatgt
    54781 tagtccatac aaataggcat tatggtaaga cactcgtact taatatgcaa acaaataaat
    54841 tcggtattat cggtactgat gatttaaaag aagaaggcta tatcgctcat attttaggtg
    54901 taaatgctga agaaggcgat gaaattactg agtatttaaa tgaagtcatt cattaaagat
    54961 aaaaacccct aactagatta caggtccatg cttgaattgc atgattccca ttttcaatct
    55021 agctaagggt tttattaatg ttcagtttct tgaatggttg gcttaatctt cacatcttga
    55081 agtttattgt cgtcatctat cacatcagac ggatgaactt cttctattaa ctttttaacc
    55141 tcttgtttag acaaatgtct taatacaaag taaggacaac caaagttaca atattcaaat
    55201 atgtaatctt gaatatttga aaaacgttta ctcatctctg cttttttatt agaatctttg
    55261 taaaagcctt ttaatcgtaa ttgatcgtaa ccatagtcac caactatgta atcatattta
    55321 tctaaaatat ctgaatacct agcaataaat tgttcttcat taaaacattc gcgataattt
    55381 tctattaatt caaagtaatg ttgatctact tttatcaaat tcttcaccta tctatgacaa
    55441 tgaaaggctc agtttatact tttagtgttt cataaaaata atgattactt ctatgacacg
    55501 ttcgttttgt acaaactaag cctttatgcc ttattaatgg ttaaatatta actatttaac
    55561 tgtgcctcac cttggcgttg cttttcttta gcagcttcat ttacttgctc atccgcatga
    55621 taagaactac gtactaaagg tccagcttgg caatgtttaa aacctttatc cattgccact
    55681 tttcttaatt taccaaactc taaaggcgtg taatattttt gaacctttaa atgtttacgt
    55741 gaaggttgta aatattgacc aatcgttaaa atatctacat cattcgcacg taaatcatcc
    55801 atcgtttcat aaatttcttc tatagtttca cctaatccaa ccataatact tgatttagtt
    55861 gggatatccg gttgtaattc ttttgaacga cgtaaaaact ctaatgttct gtcgtaagtc
    55921 gcacgcgcac gaactctcgg tgttaagcga cgaacagttt caatattatg gtttaaaatg
    55981 tcaggtcttg acgccattaa tgtttctaac gcatcatagt ccccgcccat atctgatggt
    56041 aaaatttcaa tcgttgtaaa tggatttctt tctctaactt tacgtactgt ctcagcataa
    56101 acatttgaac cagcatctct taaatcatca cgcgcaacag cagtgataac aacgtgtttc
    56161 aaattcatta attcaactga ttcagctaca cgttcaggct catttaaatc aagttcatta
    56221 ggtaaacctg tcttaaccgc acaaaaacga caagctcttg tacatacggc acctaaaatc
    56281 ataaatgtcg ctgtacgacg tgcaccccaa cattcatgta tattaggaca tttagcttct
    56341 tcacatacag tattaagatt tttttccctc atcatcttct taagtcctgt atagttttcg
    56401 ttggtattta attttatttt caaccaatcc ggtttacgta atatttcctc gttttttgtc
    56461 gccataacaa cacataccct cctgttaagt gtatctttaa acattatatc gaaattcatg
    56521 acaaatgaaa atccaataat cttacttttt aatattccaa taatttttct ttaaatatat
    56581 ctcttaaaaa ctctggcatt aaatactctt ttggtaattc tttcaatatt gggaaataac
    56641 gaccgaacgt atacatatct atcgtaccta atacatattc tttgtcgtct tcgatttctt
    56701 ctccattcag atagtaacgc cctgtagaat gaatgtaccc taaattataa agaatatatc
    56761 ctccaaatat attccctctg aaacccaaac cttgtgcatg ttcatacata tattcttgtt
    56821 tattactttt agctataatc tcttttaatt tcacaccaga aagtctaacc cttaccatat
    56881 taatcggatg cggtaacatt tgatgaatgt catattctgt cacttcatct tttacaatat
    56941 ctttaacgag taagccggca ttgatgatgg cacattgtgc atgtgtatac tcacaaacac
    57001 tttgagctaa taagtatgca gcttcagtta tgtgattcat actacgctta agcactactg
    57061 gatgttgaat tactgaattg gacattaacg tttttccttc ttcttcaaat gaagtttcaa
    57121 cttcaggtaa tgtttctaaa ggaataatct ttgcagtttt atgtactact ttatgtgcct
    57181 caaaagttaa attaacctct ccaagataat taccatactt tccagctgcc gccatcagta
    57241 caccattatt aatttcacca tgttcaaaat aatgatgcgt atgactacca aaaatgacat
    57301 caatttcagg caattcttgg cataatgttt catcgaagaa aatgccacaa tgacttagca
    57361 cgattaatac atcaaattta cctcgttgaa gttcaatttc ttcttttata gattcaagtg
    57421 gatcggtaac aatccaatct agcgcacgat aaaatggggt aaaaggtgct gtcgctgcaa
    57481 cgaatagtat tttcacaccg tctatatcct taatataaga agaaacgata ttatttggta
    57541 aatgacctga ttcatctata acattgctac atgtcactat aaattttgct tcgtcgtaaa
    57601 ggtgatttaa agcttcgtgt gaaatggtca tcccttcatt attaccgatt gttgcaacat
    57661 cacattttgc ttcatttagt aatgccacat tctttttacc taaagttgct tcagttatag
    57721 gtgcggataa atctacatga tcacctagat caacatataa agaaggatgg ttaagtcgtg
    57781 gccgatgttc tgccatatat gctttaatgc gttcgtattc atgtaaatga ctatgaatat
    57841 cgttcgtatg ataaattgta agcctcaaat tgacgtcctc cttttaaagt tgtattaaat
    57901 caacgcacga ataattaaat atatacccat taacaacatt actgttctca ataatgttac
    57961 taccgtatct gacttaattg attgattcac tttgacaccg attttcgcac caaaataact
    58021 agaaataatt aaaatgattg cataacccca agctacgtga ccttgagcaa tgtgccctat
    58081 agaactcatg acacttgaaa agaaaatcat catcatactt gttccaacag ctacatgagg
    58141 tggaaatcta aatacaataa gcattagtgg cgtcataagt gcgccacctc caataccaaa
    58201 taaacctgtc aaaataccaa ttaaaaatgt agtaacaaaa gcgaataaag gcggtacact
    58261 ataatgatat gttttacctt tagcatctac ataagttttt tcatacttag gtttatcaaa
    58321 tattttaaac ggtttaatct tatttcttac cattaataaa atggctacga aaattaaaaa
    58381 gattccaaaa tataagttaa atgactcaaa tgttaaatat ctactaatga atgacccaag
    58441 caatgaacct ggtaataatc caaataaaaa gatggaacca tttttaatat caacttgttt
    58501 tgtttttaaa tatccaagtg atgaagaaag tcctgtcaca attagaatga ctgaagacgt
    58561 ccctatcgct acttgtgttg taatattatg tagtaatcca tgttcaacac cgaggtaaac
    58621 cattgttgga acgataataa taccgcctcc aatgcctacg attgacccta taatcgctga
    58681 caaacctccg attaaaacta ataatgtaat tgttaataac atagtcgtcg cctcttaaaa
    58741 taattttaat tgttgtggtg ctaacccttc atattctata ttcaataatc gctgatatgt
    58801 tttggcatta tttgctgcat gaccaccaga attattgtta aatatgacgt aaactttctt
    58861 agctttttgt gctaatattt gtgccttttg tgccaagtct attaattctt gctcattata
    58921 atcatataaa tagcgtacat ctcgccattc ttgatctgac atatctttct tagtccaacc
    58981 gtaatgatta cgtccatgat aacgtacaaa cgcaatttca tttgtgattc gattgactaa
    59041 aggtacactg ccatctttca cttgtggttc atcaactact gcatgaatga tttgatgttc
    59101 tgttaaaaat gccaatgttt gttctttaaa tgcatcacta aaccatgatt gatgcctaaa
    59161 ttctacacac attggaaatg cttgtaattg ctgtcttaca tacaaaatat atttgatatt
    59221 ttgtgcattg cagtcaaacc atggcggaaa ttgaactaat accattgcta attttttctg
    59281 tgtatgtaag ggctctaaca tattcttaaa ttgatcaaat agttcttgcc ttgtatctgc
    59341 aaatgttttg tagtctgcat gcaatgtgag tgcttgatga attttgacca caaattcaaa
    59401 tgtatcaggc gtttctttta tccatttcaa tatatttctt tccggttgta tcgcatagta
    59461 tgtcgcatct aattcgacaa ccggaaaatg tccagcatat gttttaagtt tatcggtttg
    59521 gcgttctaaa tcttcatata atgaatagtg atcaccccaa cctgttaatc cgatgtttat
    59581 catatatatc accaatgtca tcataccata taacttttat cataatcatt tcagcgaact
    59641 ttcgtttgat gtttttgctt gattaaaatc tttcggcgtt cttcagcttg atgttttcgt
    59701 ttgattataa tcatttcagt gaactttcgt atgatgattt cgtttgatca taatcatttc
    59761 agtgaacttt cgtttgatga tttcgtttaa tcataatcat ttcagcgaac tttagctcga
    59821 taatttcgtt taattataat catttcggtg accttcagct cgataatttc gtttgattag
    59881 attggtaaaa tagaaacgca atccacaaaa atggcaagca ctaaaataat gtttgggggt
    59941 gcttgtgctt ttgtggattg cggtcgatta tttatattgc atgatttgat taatttgatt
    60001 gattatattg gacatgatgg tgttggcggg atgcgttgtt gctagtcgcg ggctttgtcc
    60061 actccacata tgtgttaact ctttgtcgcc gatgtttgct gcggcttttc ttatgctact
    60121 tgttagctca ttttgtattg gataatctgg gatgtcgcct tcgtattggg acatttcttc
    60181 gataaaccta ttgttgatac cgcgtgcaag ctttccacta aacgcttttg taacgactgt
    60241 atctgtttct ttactattta taattgcgtc tcgcagtagt tctgatgcat tactatcttg
    60301 tgatgttaaa aatgcggtgc ccatttgtac cccttctgca cctaagacaa tacttgccaa
    60361 aactcctcta ccgtccataa ttccaccagc ggcaatgacc ggaattgaaa cgacatctac
    60421 aatttgtggc actaaagata ttgttccaat cataggtaat tgatttttag gttttaaaaa
    60481 tgaaccacga tgtccacctg cttcactacc ttgagcaacg atagcatcca tacccgcttt
    60541 ttcattcgca atagcttcat caacacttgt tgctgtacct attagcttaa tgtttgcttc
    60601 tttcaatctt tttataatag attcatttgg aattccaaaa gtaaaacaac atacagtcac
    60661 ttgcttttta attatcgtat caatatgaca cttaaattgt tgttcttcgg taatttttac
    60721 aaccggctct tctaaatgta atgcgcgtcg ataaggtttt aaccatgcat tcatattttc
    60781 aatttgacta ctggtatatg attgttgact tggtacaaag acatttacgc caaaagaatt
    60841 tgacgttaat tggcgtacat aatctatttc gtcttctaat tgctgcgtat taaagtaacc
    60901 tgcgcctatt gtgcctaacc caccactgtt acttactgat gcaactaatt tcggtgtcgt
    60961 acttcctgcc atacctgctt gtataattgg atattcaata cttaacattt gagtaagtcg
    61021 attcttattc cacatagctg ttcgctcctt atatagatac gttgcgattt ttccgttgtt
    61081 gaaattgaat ttgctgttga gaaagttttt ctttttcctt tttatccatc tcatcttcaa
    61141 tttccatacc taataattct tcaattaagt cttcatgtga cactatcgct tcggtaccac
    61201 caaattcgtc caacacaatt gctaaatgtt ttctagaaat agtcatctta cgtaataccc
    61261 attcagcttt attgtgttca ttcacaaata atggcttagc tgaatagttt gtaatttgat
    61321 cttctttttt attactccaa gccaacagat atttagaatg aaacacccca ataatgttat
    61381 caatatctcc ctcatatact ggatatctag tgtatggctt attcataacc gtttcataaa
    61441 cttcttcgta tgtcgcattt gaagcaaatg ccgtcacatt aattctaggt gttgtatcta
    61501 catcttttac ttttaaattt tcaaaattaa tgacaccttc caacctactc gtctcaattt
    61561 catttaaagc accttcatgt ccagcaattg ctaacattgt tttaaattct tcttttgaaa
    61621 attgatgttc ttgaggttgg cccttagata aacttcgatt aatactgtcc gtcaacttat
    61681 ttaaaagtaa tgtgataggg cgaaacacaa tgacacaaat attaataatt ggatatacaa
    61741 gccttgttat tttatctgga aatgttgcag cgacagactt gggaatcact tcggaaatca
    61801 aaatgataac aactgttaaa acagctgatg caataccaac gctaatcccc caacgtaaag
    61861 ccataattgt aacaagtgtt ggtaataaaa tattcgcgac attattccca attagaatcg
    61921 ttgtaataaa ctcgcttggt ttttcaagta actttacaat gccttttgct tttttatcac
    61981 ctttatcagc ttcagtttta aattttgttt tattggcagc cgttaatgcc gtctcgcttc
    62041 ctgaaaagaa aaacgaaata aatatcaata taattatggc aatgatcacg cgtgtagtct
    62101 ccttattgtc atatcttatt tttattgtag ttacttaatt cccgacgttc tcgtttaata
    62161 aaccagttaa aattcattat atagaatagt cttaataatg ataattaata tgcattttta
    62221 gtcatagtta ctttaatgcg ttcattagta aaatgatgct atagttcgac ctgattgtta
    62281 cgaataaatt tacacaataa aaaaatttta acaaattcag tttatgacat agttataatg
    62341 atttgaaacc gctataatga taacaacaag tttctcataa atttattcta attatctttt
    62401 aaataacttt agacaagtac ttgtttatat ccaaatatag aaagaaggat taacatgtat
    62461 tttgttttag ctatatttac aatcattagt gccagtataa gtttaggtta ttcaattcaa
    62521 gcatgtgcat ctagccataa tataaatgca tattatgcac ttagtcgaag cttaccttta
    62581 ttttaattag ctattttttc tttagtcatt catagtgcta tatttttgat aactatatcc
    62641 attgcaatga ttttagttca atttttagat gcgattgttg gttataaaag taaagatgtc
    62701 tttaaaactt acggtccatt agcaacatct gtagtgaact taatattatt aatagttttc
    62761 ttattttaac tcacttatac aacgaatctt aatcgaacta atatcgaatt atctttaaag
    62821 aatatttgat gtagttttca attaatttaa taaagaccag cactctaatg ccacaatcat
    62881 gttgtatttg tgttgtcgct ttatccacca tcaatgatta ttttttacac caatcaaaaa
    62941 atcggattta taaatacgca caaagcttat ctatcaatcc gatttagtta taaaaccaaa
    63001 aaaagccaca ttaatgtggc tttttgttat attcagtatc gaaatggtat caatacctat
    63061 ttccggaagt taagaatagc ttaacaacgc ggtttaaagc tagccaatac taccttccat
    63121 ttcgaacttg attaaacggt tcatttcgac cgcgtattcc attggaagtt cttttgtaaa
    63181 tggttcgatg aatcccataa caatcatttc tgtcgcttct tcttcagaaa taccacgact
    63241 cattagatag aataattgtt cttcagaaac ttttgaaacc ttggcttcat gttctaatga
    63301 tatttgatcg ttgaatactt cgttatatgg aattgtatct gatgttgatt cgttatctaa
    63361 gattaatgta tcacattcaa tatttgaacg agcgcctttt gctttacgtc caaaatgtac
    63421 aataccacga taaataactt taccaccatt tttagaaata gatttagaaa caatcgttga
    63481 agatgtattt ggcgctttat gaatcatttt agcaccggca tcttgaactt gtcctttacc
    63541 agcaaatgca atagataatg tactaccttt tgcaccttca cctaaaagaa cacagtttgg
    63601 atatttcatc gttaacttag aacctaagtt accatctacc cattccatat ttccgttttc
    63661 ataaacaaaa gtacgttttg taactaaatt gtatacattg ttcgcccagt tttgaatcgt
    63721 agtataacga acgtgcgcat ctttatgcac aatgatttcc acaacagcag agtgtaaaga
    63781 actagttgta taaactggtg cagtacaacc ttctacgtaa tgtacagaag caccttcatc
    63841 agcaatgatt aatgtacgtt caaattgacc catgttctca gagttaatac ggaaataagc
    63901 ttgtagtggc gtatctagtt tgatattttt aggtacataa atgaacgaac cacctgacca
    63961 taccgctgag tttaacgccg caaatttgtt atctgctgca ggtactacag aagcaaagta
    64021 ttttttgaat aattcttcat tttcttgtaa agcactatct gtatctttaa agataatacc
    64081 tttttcttca agttcttttt ccatattatg gtaaacaact tcagattcat attgagcaga
    64141 aacaccagct aaatattttt gttcagcttc aggaattcct aatttatcga aagttctttt
    64201 gatttcttct ggcacttcat cccatgaacg ttcagcttgt tctgaaggct ttacatagta
    64261 agtaatgtca tcgaaattca attctgataa gtcgccaccc cattgaggca ttggcatttt
    64321 ataaaacaat tttaatgatt taagacggaa atctaacatc cattccggct catttttcat
    64381 gttagaaatt tctctaacga tattctcagt taaaccacgt tctgatctga aaatggacac
    64441 atcatcgtcg tggaatccat atttataatc cccaacatca ggtgcttttt tagccatttc
    64501 aatcactcct taaaaatata tttacaacgg cgtgcgtaag tttttaattc atgatgtaaa
    64561 ccatattata acaatgacat gacatcttat aaaaattttt atacttttat atgtctaata
    64621 tcaaaatcat ctatgattaa cagcattcta ttcttcttca gtcgtacctt ctgctttacc
    64681 ttctttagca acagtacctt tttccaatgc tttccaagct aatgtggcac atttaatacg
    64741 agctgggaat tgagatacac cttgcaatgc ttcaatatct cccatttctt ctgtaatcac
    64801 atagtcttca ccaagcatca ttttcgtaaa ttcttggctc atttgcattg cttctccaag
    64861 tgaatgacct ttaacagctt gtgtcatcat cgatgcactt gccattgaaa tcgaacaacc
    64921 ttcaccttca aacttagcat cttttataat gccgtcttct atatcaaatg ttagtcgtat
    64981 acggtcaccg catgtcgggt tattcatatc tactgtcata gacccgttat ctaatacacc
    65041 tttatttcta ggatttttat aatgatccat aatgacagat ctatataatt gatctagatt
    65101 attaaaattc ataagagaaa aactccttcg tttgtttcaa ggcatttatt aactgatcaa
    65161 tgtcttcttt cgtgttgtat atataaaaac tcgctctagc tgttgaagac acatttaacc
    65221 atttcattaa cggttgcgca caatgatgcc cagctctaac cgctacacct tctgtatcta
    65281 cggctgtagc aacatcgtgt ggatgtacat cttgtaaatt aaacgttatt acacctgcac
    65341 gacgatcctt tggcgggcca taaatttcaa ttccttcaat tgcagacatt tgctcataag
    65401 catatatcgt taattcttgt tcatatttat gaattgcatc aaaacctatg cgttctaaat
    65461 agcgaatagc ttctgcaagc ccaattgctt gtgcaattaa tggagtaccc gcctcaaatt
    65521 tagtaggtaa atcagcccat gttgcatcat acttacttac aaaatcaatc atgtcgccac
    65581 cgaactcaat cggttccatt ttttgtagta actcacgttt accaaataat acgccaatac
    65641 ctgttggtcc aagcatttta tgaccactaa aactataaaa atcagcattc atttcttgca
    65701 tatcaagttt catatgtggt gctgcttgcg ccccatcaac actgataatt gcgccatgtt
    65761 gatgagctat ttctgcaatg gttttaacat cattaattgt accgagtaca ttagaaatat
    65821 gtgcaatagc aacgatcttt gttttatcat taatcgtttg cttaatatct tcgatgttta
    65881 attcaccgtc agctgtcatt ggtataaatt tcaatgtcgc atttttacgc tttgctaact
    65941 gttgccaagg aacaatattg gcatgatgtt ccatttcagt gacaacaatt tcatcgccct
    66001 cttcaacatt tgcatcacca tagctatgtg ctacaaggtt aatcgacgca gttgttccgc
    66061 gtgtgaaaat gatttcttca aaatacttcg cattaataaa acgacgaacg gtttcacggg
    66121 cattttcata accatcagtt gccaatgatc ctaatgtatg aacaccacga tgaacgtttg
    66181 aattataacg cttgtagtaa tcctctaaaa catttaacac ttgcacaggc gtttgacttg
    66241 tcgctgttga atcaagatat gctaaacgtt tgccattgac tttttgatct aatatcggaa
    66301 aatccttgat tacttcatta acgtcaaatg agtgttcggc cacttcattc acgacctttc
    66361 ttaaataaaa atcctaatca tttaaatact gacgttgtat tagtcttata ccaatatcga
    66421 cagtctatat ctattacaaa cttttatttt caaaatatta tttagaaact ttgcgttcaa
    66481 ttacttctct caattgacgt ttaacgtctt cgataggtaa ttcacgtact actggatcta
    66541 agaaaccatg tataacaaga cgttccgctt ctctttgaga aataccacga ctcattaaat
    66601 agtaaagttg atctggatca acacgaccta ctgatgcagc atgaccagct tgtacatcat
    66661 cttcatcaat taataaaata ggattcgcgt caccacgagc atgttcagat aacattaata
    66721 cacgtgattc ctgattagca attgatttag ttccaccatg cttaatgtag ccgataccat
    66781 taaatacaga tgatgcatgt tctttcataa caccatgctt aaggatataa ccatctgttt
    66841 ctttaccata ttgtacgatt ttagatgtta gattaatttt ttgttcgcct gtacctacaa
    66901 ctactgattt aagtgaactt gttgaacgat caccaaataa atttgttgta ttatcaataa
    66961 tttggctacc ctcattcatt aaacctaatg cccaattaat tgaggcatcc gcttcagtaa
    67021 taccacgtcg aatgatatga cctgtaaagc ctttatccat atagtccact gagccatatg
    67081 tgatattgga gtttgcgcca gcaatcactt cagaaataat atttaattga tttccttcac
    67141 cagatgcatt tgataagtaa ttttcaacat atgtgacttc ggcgctttct tcagtaacga
    67201 tgataacatg gttataaaag cttgcatttt cgtcgtcgtg caacacaacg tattgtactg
    67261 gatgttctac aaccacattt ttaggaacat aaacaaatac gccaccatta actaatgccg
    67321 tgtgtagcgc tgtgatacga tgttcatcta ctgttactgc atctttcata aagtactttt
    67381 gtactaaatc actatggttc ataagagcgt ctgctaaacc ttcaacgata acgccatctt
    67441 tcgatgcatt atcatcaact tgtgtgtacg caatcgtatt attatgttga attactaagt
    67501 ttttagaatg atctacgtca ataatttctc ttactgactc aggtaattgt gataaagatt
    67561 gataaacatc accttttaca tcgtgttgtt taaaagaatc aaaatcccat tttcttaatt
    67621 ttgttttatc aggttttggc atttctaaag tttctgttaa tttcaaagct tttttacgta
    67681 attctgtcat ccaagaaggt tcattgtggg ctttagaata atcaacaagt tgttcttcag
    67741 aaatgttcaa aatatcagtt gtcataactt tttcctccta cttgatgaaa tttactattt
    67801 cgtataaatg ttcattttca tcatatatag atgaacatct catggatact gtattaataa
    67861 gattattcag ctgaaccgaa ctcttcttta acccattcat atccttcttc ttcaagacgt
    67921 tttgctaatt ctggaccacc agatttaacg actttaccag catacattac atgtacttta
    67981 tcaggagtaa tgtaatttaa taatcgttga tagtgtgtaa tcattaatgc accaaagttt
    68041 tccccacgca tttggttaat acctttagat acaactttta atgcatcgat gtctaaccct
    68101 gaatcgattt catctaagat tgcaaactta ggttctaaca tcattaattg taagatttcg
    68161 ttacgtttct tctctccacc tgagaaacct tcatttaaat aacgttgtgc catgtcttta
    68221 tctatgtcta gaaaatccat atttttatct aatttcttaa taaattgcat taagttgatt
    68281 tcttgtcctt cttcacgttt cgcattgatt gctgaacgca tgaaatcagc atttgtaaca
    68341 cctgtaattt ctgatggata ttgcattgcc aagaataatc ctgcttttgc tctttcatca
    68401 acttctaatt ctaaaatatt tacaccgtct aaaagtactt ctcctttagt tacttcatag
    68461 cttgggtgtc ccataattgc agatgataaa gttgatttac ctgtcccgtt tggtcccata
    68521 atcgcatgta tttcatcagt gttaattgtc aagttaacac cttttaagat ttctttatcc
    68581 tcaatagaca catgtaggtc tttgatttct aatgttgatg ccattttata ttccctccgt
    68641 aaaatataaa gttttcttaa ctagtttata ataattttaa tttgtagtca aaaagacttt
    68701 gtaataatgc gttcagttaa ttataactta cttatacctt aatataaaca acttaaaccc
    68761 tttttattat ttttaataac tctaaagtac aactctaatc cgctctcttt aaaaatataa
    68821 atgataataa gtgcacataa tttctcaatg gattttatga atttaaaata tgttatcatt
    68881 tcactaggac atttgtaata tggtatgatg ctatttatga ttttattcca atcgtttgaa
    68941 aggagttatt catgcaacaa tttaaatgga ttaatattct aaaaggtttt gctatgggaa
    69001 cgagtgactt ggtgcctggt gttagcggtg ggactattgc attattgtta ggtatataca
    69061 atcaatttat cgcttcaatt agcggcatat tctcacgacg tttttggcca agttttacat
    69121 ttttaatccc cattataatt ggaatgttac tggcaatggg atcactaagt aatcttttta
    69181 attatttatt aagccaacac catattccaa ctatgttttt ctttggtgga ttaatcattg
    69241 gtatcgttcc atatttattg aaaatttcta actataaaac gtcatttaca actaaacatt
    69301 acatgatggt tatagctggt atcgctatct taattgttat tacattaatg aataatggcg
    69361 ataaacatgc tggagaaaca cttactctat caactggtct tattattaaa tactttattg
    69421 caggtatgtg tgcatctagt gctatgttac tcccaggtat ttcaggttca tttatgttat
    69481 tagtatttgg cgtctatggc acagtcatgc tagcaatatc tgaagttgtt aaacttaact
    69541 ttacaggtct tcctatatta cttgcagtcg gatttggcgt gcttgctgga ttcattattt
    69601 caagcaaaat tatccagtat ttcctaacac atcataaact aatgactttt gcattaatca
    69661 ttggttttgt tgttggctcc ctctttgcag tatttccagg tttaccaact aatatcgtga
    69721 tgtggtttgt ttcattagta gtatttatca tcggttttat tgtaagtttg actttaggtc
    69781 gaattaccgc tgaaaatgaa tagtcatttt aggggtgata aaatattttc agtatctcgt
    69841 taatcatatg caatatatgt ctcgttttgt atacatatta ttggatatca ttagcgagtt
    69901 tttatttagt ttttttctaa cattaaaata attattaata aattttggta tccacttttt
    69961 taatacaaaa accacctagc cgatggttat accgactaag tggcatgtgc agtgtattag
    70021 gaataaaaaa gtaaaattac tcgcctttgt taccttttac tttatcaata aaatcagttg
    70081 ctttttcttt tgcattttca acgaattctt tcgctttacc agaagcttta tcttctttac
    70141 cttcgttttc taaattttta ttatcagtaa cattacctac tgtttcttta acattacctt
    70201 ttgcttgttc gaatttactt tcgtctgcca taataaatgc ctcctcggaa taattaaatg
    70261 ttatatataa tacttaccca ctgaaaaatt atctaaacat tttacttaaa taatttttgt
    70321 tattgatttg acatcatttt ataactagcg aaatagattc atcattaact tgagggagtg
    70381 ggacagaaat gataaagaat cactaatgat ttatgatgta gtagtcacta tccatgtgaa
    70441 attaaaaata ggaataaatg agtagaacgc atgcatatag gattttactt tatccgtaat
    70501 agcatctcat tcctaaatat catataaata cctgtttaaa ttaaaaagcc cagcaacatc
    70561 acgttactga gccattaata attatttagc aggaataact gcaccattgt atttttcatt
    70621 aatgaagtct tgaatatctt tagattgtaa tacttcaatt aatgctttga ttttcttatc
    70681 atcttgattt ccttctttaa cagcaattaa gtttgcataa ggattatctt tcgcactttc
    70741 tacagcaata gaatcttttt taggatttag tttttgttcg attgcaaagt ttgaattaat
    70801 gataacagca tccgcgtctt cattttgata tattttaggt aagaattctg ctgattgttt
    70861 attattaaac ttaatatctt ttttattctc tgtaatatca ctaaacttag catcttcaat
    70921 ttttacgcct tttttgatct taattaaacc tgcatcaacg aagaatttta agaagcgtcc
    70981 ttgttcagct ggattattag acacataaac tgttgcacct tttggtaatt cttttaaact
    71041 tttatacttt ttagagtata cagccatagg ttctaagtga acatcaccgg cacttacgat
    71101 tttgtaacct ttatcctttt tctctgtgtt taaatatggt gtatgttgga aatagtttgc
    71161 gtcaatttca cctttgtcta gtaatttatt aggcgtagtg taatcgttaa ttgttttaat
    71221 atctagttca taaccttttt tctctaataa tggttttgct ttttctaaaa tttcagcatg
    71281 tggtgctggt gaagcaccta ctgttatttt cttgtcgtca ctgccacttt tgtttccatt
    71341 accgcaagct gctaatacaa ctgcaaatgt taatactaaa ataagaccaa ataatttttt
    71401 cataaaatga aacccccaat ttatcgttta tcaagtttat ttgtaagcca atccccaatg
    71461 aattggatta taaatacaat aattaaaata aaaactgttg atactaaaat gacatcattt
    71521 tgatttcgag tgaaacctgt taagtatgct aaatttccta aaccaccggc accaattaca
    71581 cctgcaactg ctgttgaacc aactaaagcg attgctgtaa ctgtaatgcc agacactagc
    71641 gctggcatgg cttcaggtaa aaggacttta cgaattactg tccaagtatt agcacccatt
    71701 gaccaagccg cttcgatgac gcctttatca atttctttaa aagcaatttc tacgagcctt
    71761 gcataaaacg gtgctgcgcc aatgatcaag gctggtaacg cacctgtcgg accacttatc
    71821 gttccaagta tcaaacttgt aaatggaatt aataataaaa ttaaaataat aaatggtatc
    71881 gctctaaata agttaacaat gaaagaaacg atagaataaa ataaccttgc accgatagac
    71941 ttacctttag cagacaagaa taataacaca cctaaaataa gaccaagtat aaatgcaaat
    72001 atagttgaga cgactgtcat gtatagtgtt tcgactattg cagtccaaac ttctggccac
    72061 tgaatattag gcattgtaat catttcattt ataatttcac taaatgattt acccatgtct
    72121 taacacctcc attttaactt gtcgctcaat taactctttt tcgaattttc cgaaatctac
    72181 acttgaaata tatggaatat gcagaactaa aaagccgact gttccatttt ttgtattttt
    72241 aatatttgct tctaaaatat taattttaat atcataggca gttgataggc tcgatacaat
    72301 aggctcggtt gttgttgaac cagcgaaaac taatctaacg atataagcat ctttttctaa
    72361 tggctctaat tctgttaaag atgtttcgaa atcatcattt aaatcgtctt tcacaaatcg
    72421 ttttgtcaca gtgtgttgcg gattttcaaa aacctgtgtc accggtcctt gttctatcac
    72481 tttaccactt tccataactg caacttcatc acaaatacga cgaatgacat gcatttcatg
    72541 cgtaattagt acaattgtta aattttgttg ttctctaatt tttagtagta gatctaaaat
    72601 ttcatctgtt gtttgcggat caagtgcact tgttgcctca tcacaaagca agaccgttgg
    72661 atcattagct aacgctcgtg caatcccaac acgttgcttt tgtccacctg ataactctga
    72721 tggataagct ttttctctac cttttaaacc gacaagttcg acaagttcta atgctttttg
    72781 cttagctctc cttctaggga cacctgcaat ttcaagcgga aacataatat tttttaacac
    72841 agtccttgac cataataaat taaaatgttg gaagatcata cttacttttt gtctttttgc
    72901 tcttaatcca tttttggaca attgacctat atggtcccca tctataataa cttcacctga
    72961 tgtaggcgct tctaaatgat taaacattcg aatcaaagta ctttttcctg ctccagaaaa
    73021 accaatgacg ccataaatcg atcctgctcg aatcgataaa ttaacgtgat ctacagcaag
    73081 gacttcttta tttttagtcc gatattcttt aacaacttct tttaattcaa tcacgttgat
    73141 tcctccctgt gttgcttaat aaaataaaaa aatgctttct caatatcgat agaaaaattg
    73201 agaaagcaat agtagtattg tttctctcat cttcaaaagt taaaacttta tgtgaattgg
    73261 caccatttct atataagacg gttgccgggc ttcgtagggc acatccctcc accactctcg
    73321 ataagagttt acgcatcatt taatttgtat taatcctaac accttagtaa aatttcgtca
    73381 ataactattt taaattttct aacaaatcag tcaccgattt aaatgcataa attcgtttta
    73441 cttctttatc tttattcatc aacaataaaa tcggcgtaga catgatttgc atatctttac
    73501 aaaactgagg ataaaagttt aaatctattt tcaataatgg caactgcaat atttcattag
    73561 caatgtctaa cattctttct gaaaccttac aagtaccaca cgttggtgta taaccaaaga
    73621 ttaaatgttt gtcttcctca taaaatgtag ttacatcttt gatgtctaat gaattattca
    73681 tttactaaaa ctaacctttc attatttata ttcggtaaaa gaggtgtttc tttcttacaa
    73741 gtaaagccat gttttgaaag tacatgcgcc aaatattgtt tggggcaatt cgcaacttga
    73801 cagtaagttt tatcaataaa tatatgttca ctttcactca aataacgttt aaaccaattt
    73861 ctaattcgat ctccttcgtc atcagaatcg gctaatacaa aaacttgttt atcatacagt
    73921 gattctatca tatcatcaag cttatctata ctcattgttc catgagtaca aataatattg
    73981 actggttctg caataacctg ttgcaccctt tttttatcag attttccttc aacaattatc
    74041 actttattta caatagccat catcatcacc ctttaaaatc aataaacatc tgtcactgta
    74101 tcatttcaca aaattggtat gaataaaaca taaatcacaa aaaatttaaa ctagcttaat
    74161 ataataatta caaaatcaat gtttgactag ctgggacatt taacataagc agacaaaggc
    74221 taagtcaaaa atcaacatcc taaaatctac aatgttatat taccaatagt taaccaaaag
    74281 aaaatacacc tataacaaac ttttcaatta tagcggggcc ccaacataaa gaaatacttt
    74341 ttctttagaa attagtattt cttatgcatg agttttactc atgtattcct atttttaagt
    74401 acacattagc tgtggcttat gaaaaagaac cactacatta taaatcacta gtggttcttt
    74461 ttcatttctg tcccactccc tagattgatc tatagatact acacttatta aagtaatata
    74521 ttttcatgat tctcttagct gcaatcccat gaatacatgt aatcatcaaa cttcatagcc
    74581 tcaaggtcag tagatttcac taagatattg gcaataccta aatcacccca tataatcgaa
    74641 gaattaccat ctcttgtaga atcaatttgc agtaagactc tatcatacat tttcagttct
    74701 tgatcgttcg ttcttggatc tatttggtca aaatatggat aaccaccaag ttgattaaat
    74761 ggttccttag cagtaaatgt gttacacaca ggttccatca attcatcata accaccaaac
    74821 attgatttta gcgcgaagga tggattgact ttattccaca atgcaagcac gtcctcatcg
    74881 tacttataat cagtacatgt aatagtttgt ttcgacaatc taaattctat agaaaatgct
    74941 ccactgaacg ggatatcctc attatcagca tctaatgact tcaaatgcgc ttgaatattt
    75001 tcgagtgata aatctgtaat tggctctttt atataaacaa gccttgagtt tatattgttt
    75061 ccctttaaat tttcagacat tccatacatt tgatcttctg aactaatcca aaactgcaat
    75121 atcccttctt ttacaggaaa taattcttgt tgttctggaa gatcatccaa attaatctgc
    75181 gctaacaata ccattggtac attattttca tctaatggta tatctttaaa agattttaaa
    75241 aatggcattc caccaatctt actctggttt aatgtttctt ctttcatctc ttttagatcc
    75301 atttcaatac atggtagtac tggtaaatta ccgttttcta cagattctac gaaacggtta
    75361 tatgcttttt gctccttttt agaaagatga ctaacgtctt gaatgtttag catattaact
    75421 tcccccaatt tttattttta aaatagctaa attcattatt ttcatcattc ttgaataata
    75481 aaatgtagca atactccaaa taatagtacc taataaattt tctttcatat tatttactta
    75541 ctcagactaa aaataaactc ctcaatctta gattaaggag ttacacggtg attattcacc
    75601 aatcatttct gaatattttt cagctgttaa taaagcttca agctgacttt catcactaat
    75661 ttctactttt accatccatg ctttttcgta tggagattca tttacaaatt cgggactatc
    75721 ttctagttct tcgttgactt caactacttt accagagatt ggtgcatata attctgatac
    75781 agttttaact gattctacgc taccaaacgt atccccttca ttaatttcat catctgtttc
    75841 cggtaattca acgaaaacaa tatcacctaa ctcgctttgt gcgtattctg tgattccaat
    75901 tgttgctaca ttaccttcaa ctttaaccca ttcatgctct tttgaatatt tcaattcatt
    75961 tggtactgcc aagagaatcc cctcctaatt aatctttaca tcattaatga tgccataagg
    76021 ctagatgcta ttcaactata tttataaaaa ttaacaattg tatagcttat ttcattttac
    76081 atgtaatgaa tctaaatatc gagatattta gtaaacgttt acatttcact tacgctaacc
    76141 aagtctcttt atattgatct tctttaaatc ctaatgttat cttatcgccc attactgcta
    76201 gaggacgctt tactaacata ccatcagatg ataacaactc taacttttca tcttctgata
    76261 aggtttgtaa tttatttttc aaatcaagct cacgatattt cgcgccgtgt gtattaaaca
    76321 atttattaat ttctacgcct gtatttgcaa ttattgtttt aaattcattt attgtaggtg
    76381 tatgttgaac gatatcaatt ggttcataac ttacgccata ttcatctaaa aactttgctg
    76441 cctttttaca agttgtacaa ttcttatatt ggtaaaattt aatcatacga ctgcaacctc
    76501 ctttatgtat ttaaaataaa tatatcattt tccatagcaa aaggctttca ttttgaagct
    76561 aaaatttttt attatgttat aaatttagct ataataaaaa ttattaaact atctagagga
    76621 gttgttacaa tgcaagcaat caaaagtaat gaatcattta aatctgtaat taatagcgat
    76681 acacctgtaa ttgttaaatt tgaggcagga tggtgcccag actgtcgtgc tatggattta
    76741 tggattgacc caatcgtaga acaatataat gattaccaat ggtatactgt taatcgtgat
    76801 gaattagaag atgtagttgt tgaaaatgaa gttatgggta tccctagctt gctagtattt
    76861 aaaaacggcg acaaaattgc acaccttcat tcagcaaatg ctaagtcacc tgaacaagtt
    76921 gaatcatttt tagcagaaac ttttaaataa atact
//
LOCUS       DAKPJH010000002        63233 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.002, whole genome shotgun sequence.
ACCESSION   DAKPJH010000002 DAKPJH010000000
VERSION     DAKPJH010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 63233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63233
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.002"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(67..1023)
                     /locus_tag="OY092_000077"
     CDS             complement(67..1023)
                     /locus_tag="OY092_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075056.1"
                     /translation="MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDF
                     KEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVED
                     LRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQ
                     EAQASQAKVLAESTNKVDAKSATDEKADSKDSKVAGVNTSTDAKTDTKADNAGDGTTT
                     KVDKEDQISATEAIEKASVEQSKNDNAAETSNKEATVDAEAQHDAEQQVAEAHAEASK
                     QATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL"
     gene            complement(1141..1803)
                     /locus_tag="OY092_000078"
     CDS             complement(1141..1803)
                     /locus_tag="OY092_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075057.1"
                     /translation="MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNK
                     TENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHE
                     LNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHP
                     TNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRK
                     PF"
     gene            complement(1946..2353)
                     /locus_tag="OY092_000079"
     CDS             complement(1946..2353)
                     /locus_tag="OY092_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCX1075058.1"
                     /translation="MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLNLNDLH
                     DSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAV
                     RDKSSHQEVHENNSAYEEIDITHFAEASKGPKA"
     regulatory      2533..2635
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            2866..3444
                     /gene="xpt"
                     /locus_tag="OY092_000080"
     CDS             2866..3444
                     /gene="xpt"
                     /locus_tag="OY092_000080"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCX1075059.1"
                     /translation="MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYE
                     QFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKN
                     KTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQN
                     GHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE"
     gene            3444..4712
                     /locus_tag="OY092_000081"
     CDS             3444..4712
                     /locus_tag="OY092_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000793018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HCX1075060.1"
                     /translation="MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDI
                     FMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVII
                     IAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTL
                     IIILVLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGF
                     SFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIF
                     NSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCIPKLGALANIIPLPVLGGAM
                     IAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQ
                     NGIVLGAISAIILNFFFNGIKYKQTEENVK"
     gene            4750..6216
                     /gene="guaB"
                     /locus_tag="OY092_000082"
     CDS             4750..6216
                     /gene="guaB"
                     /locus_tag="OY092_000082"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HCX1075061.1"
                     /translation="MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNI
                     PVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFL
                     TPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQE
                     NLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHG
                     RLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLV
                     AGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHG
                     KAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGS
                     LGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSH
                     DLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF"
     gene            6241..7782
                     /gene="guaA"
                     /locus_tag="OY092_000083"
     CDS             6241..7782
                     /gene="guaA"
                     /locus_tag="OY092_000083"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HCX1075062.1"
                     /translation="MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIE
                     EIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVER
                     ANEREYGKAIINAKSDELFVGLPAEQTVWMSHSDKVIEIPEGFEVIADSLSTDYAAIE
                     DKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCKGQWTMENFIEIEIEKIRQRVGD
                     RRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNI
                     IRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIE
                     SGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFP
                     GPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGD
                     YRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPS
                     TIEWE"
     gene            complement(8022..8414)
                     /locus_tag="OY092_000084"
     CDS             complement(8022..8414)
                     /locus_tag="OY092_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000888757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075063.1"
                     /translation="MLEDNGDIRLLYQSIEELASVLGQSQFETKTVSLIFVQMDLRYS
                     VFEKVQTDFMKYLAHKNSDEIKYIDLIKIIENALPEDKELSINVINSIIIGFANNYYP
                     ILQSLVPEIQSSYGITINKNFNIDSIDF"
     gene            complement(8436..8915)
                     /locus_tag="OY092_000085"
     CDS             complement(8436..8915)
                     /locus_tag="OY092_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075064.1"
                     /translation="MKITKTIGSLVLTAVLLTSVSPLTNANEIQTNNTKTAHQSYENI
                     NGVKINRNPNLPMNPEAQQRIGGTKVVKTAIKLIINNRGKAKNVIQQVGGKKAATIFD
                     KGYSGIVKELKPLLKWSEVPANAVGDAVKRGAINAGLSKGDAGIISTVVKEAIAWLF"
     gene            9843..10175
                     /locus_tag="OY092_000086"
     CDS             9843..10175
                     /locus_tag="OY092_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000212550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075065.1"
                     /translation="MATLKDVKTGKKEILPSTAKDKNGKKVTLIYFEKDDKLGFYVQK
                     TQKERGVGKCVSGIAGGAVTGGTTLGLAGAGVGTVTIPVIGTVSGGVVGAVGGAVGGG
                     LTGGATFC"
     gene            complement(10763..10948)
                     /locus_tag="OY092_000087"
     CDS             complement(10763..10948)
                     /locus_tag="OY092_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000384191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075066.1"
                     /translation="MDYALSIASEIYDRTALRHICVDWYDNKNLKEFYCNNCGFKIYQ
                     EKITKKGKLISAFYKLK"
     gene            complement(11328..11480)
                     /locus_tag="OY092_000088"
     CDS             complement(11328..11480)
                     /locus_tag="OY092_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075067.1"
                     /translation="MVPEEKGSITLSKEAAIIFATAKFKPFKNRIKNNPLKTNPFLKL
                     HENKKS"
     gene            complement(12009..12368)
                     /locus_tag="OY092_000089"
     CDS             complement(12009..12368)
                     /locus_tag="OY092_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HCX1075068.1"
                     /translation="MNIISIILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLK
                     DKNINVLLKNQGVYNGLIGVLLIYGLFISSNPKEICAAILVYIIGVAIYGGLSSNISI
                     FFKQGTLPVLALISMLW"
     gene            complement(12387..13232)
                     /locus_tag="OY092_000090"
     CDS             complement(12387..13232)
                     /locus_tag="OY092_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1075069.1"
                     /translation="MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPEDWRG
                     KVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQCGVAHII
                     FIGYYADQHNNPFHMSPYFGYAARLLATSGIDYTYVRMAMYMDPLKPYLPELMNMHKL
                     IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKCYLLSGYSYDMKELAAILSEASGTE
                     IKYEPVSLETFAKMYDEPKGFGALLASMYDAGARGLLDQESNDFQQLVNDQPQTLQSF
                     LQENI"
     gene            13704..14384
                     /locus_tag="OY092_000091"
     CDS             13704..14384
                     /locus_tag="OY092_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL1"
                     /protein_id="HCX1075070.1"
                     /translation="MKFKAIAKASLALGMLATGVITSNVQSVQAKAEVKQQSEADLKL
                     YYSGPSFEYKKVTGYGFVEGKDRFIDFIYNGQYNKISLVGSDKDKYNEEVNPDIDVFV
                     VREGNGRQADNHSIGGVTKTNRGVYYDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
                     ELDYRLRERAIKHHGLYSKGLKQGQITITMNDGTTHTIDLSQKLEKERMGQSVDGKQI
                     QKILVEMK"
     gene            14668..15369
                     /locus_tag="OY092_000092"
     CDS             14668..15369
                     /locus_tag="OY092_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL2"
                     /protein_id="HCX1075071.1"
                     /translation="MKMKSIAKVSLVLGILATGVNTVTEQPVHAENKPIQVSQNSKNL
                     KAYYTQPSVEYKNVTGYISSIQPKAGTKFMNIIEGNTVNNLALVGKDKQHYHTGVHRN
                     LDIFYVNEDKRFEGSKYSIGGITEASDKAVDQIAEARVIKEDHTGEYDYDFFPFKIDK
                     EAMTLKEVDFKIRKHLIDHYGLYGEMSSGTVTVKMKYYGKYTFELDKKLQEDRMADII
                     KVTDIDRIEVIVKKA"
     gene            15659..16690
                     /locus_tag="OY092_000093"
     CDS             15659..16690
                     /locus_tag="OY092_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000702713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL3"
                     /protein_id="HCX1075072.1"
                     /translation="MKIRTIAKASLALGLVTTGASIVTTQSANAEVASALKAGQLAKI
                     NVSSSAVTTTTQAVNAEQNRTANTEQASKSNTEKVSTSPSIKTEQTPKSNTQKATQPT
                     PSGTTQPLPNAQPQSPQSTPNASTSPSSSVETQQPQSPTTKQAQKEINPKYKDLRTYY
                     TKPSLEFEKQFGFMLKPWTTVRFMNVIPDWFIYKIALVGKDDKKYKDGPYDNIDVFIV
                     LEDNKYQLKKYSVGGITKTNSKKVDHKARISITKEDEKGKISRDDSEYKITKEEISLK
                     ELDFKLRKQLIEQHNLYGNIGSGTIVIKTKNGGKYTFELHKKLQEHRMADVIDGTSID
                     RIEVNLKSS"
     gene            17051..17755
                     /locus_tag="OY092_000094"
     CDS             17051..17755
                     /locus_tag="OY092_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL5"
                     /protein_id="HCX1075073.1"
                     /translation="MKIRTIVKASLALSILATGVITSTAQTVNASEHEAKYENVTKDI
                     FDLRDYYSGESKALKNVIGYHYSKGGRHYLVIDKNRKFTRVQIFGKDIERFKARKNPG
                     LDIFVVKEAENRNGTVYSYGGVTKKNQGAYYDYINAPRFQIKRDEGDGIATYGRVHYI
                     YKEEVSLKELDFKLRQYLIQNFDLYKKFPKDSKIKVIMKDGGYYTFELNKKLQTNRMS
                     DVIDGRNIEKIEANIR"
     gene            18203..18898
                     /locus_tag="OY092_000095"
     CDS             18203..18898
                     /locus_tag="OY092_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL7"
                     /protein_id="HCX1075074.1"
                     /translation="MKLKTLAKATLALGLLTTGVITSEGQAVKAAEKQERVQHLHDIR
                     DLHRYYSAPSFEYSNISGKVENYNGSNVVRFNQKDQNHQLFLLGKDKEEYKEGLQGQN
                     VFVVQELIDPNGRLSTVGGVTKNNNKTSETKTQLVVNKVDGGDLHASIDSFLIQKEEI
                     SLKELDFKIRQQLVNNYGLYKGTSKYGKIIINLKDENKVEIDLSDKLQFERMGDVLNS
                     KDIRGIAVTINQI"
     gene            19239..19937
                     /locus_tag="OY092_000096"
     CDS             19239..19937
                     /locus_tag="OY092_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL9"
                     /protein_id="HCX1075075.1"
                     /translation="MKLTALAKATLALGILTTGVFTAESKAVHAKVELDETQRKYYIY
                     MLKDYYSEESYEPTNISVKSEDYYGSNVLNFNHRNKNFKVFLLGDDKNKYKEKTHGLD
                     VFAVPELIDTKGGIYSVGGITKKNVRPVFGCVSHPGLLVKKIDPKHGFSVNELFFIQK
                     EEVSLKELDFKIRKMLVEKYRLYKGASDKGRIVINMKDEKKYVIDLSEKLSFDRMFDV
                     MDSKQIKNIEVNLN"
     gene            20304..20987
                     /locus_tag="OY092_000097"
     CDS             20304..20987
                     /locus_tag="OY092_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL10"
                     /protein_id="HCX1075076.1"
                     /translation="MKLTALAKATLALGILTTGTLTTEAYSGHAKQNQKSVNKHDKEA
                     LHRYYSGNFKEMKNINALRHGKNNLRFKYRGMKTQVLLPGDEYRKYQQRRHTGLDVFF
                     VQEKRDKHDISYTVGGVTKSNKTPGFVSAPLLNVTKENGEDAFVKGYPYDIKKEEISL
                     KELDFKLRKHLIEKYGLYKTKSKDGKIKINLKDGSFYNLDLRSKLKFKHMGEVIDSKQ
                     IKDIEVNLK"
     gene            21246..22802
                     /locus_tag="OY092_000098"
     CDS             21246..22802
                     /locus_tag="OY092_000098"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HCX1075077.1"
                     /translation="MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFY
                     RFLSEKAEQEYADALSGEDITYQEAWADEEYREDLKAELIDQVGYFIEPQDLFSAMIR
                     EIETQDFDIEHLATAIRKVETSTLGEESENDFIGLFSDMDLSSTRLGNNVKERTALIS
                     KVMVNLDDLPFVHSDMEIDMLGDAYEFLIGRFAATAGKKAGEFYTPQQVSKILAKIVT
                     DGKDKLRHVYDPTCGSGSLLLRVGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYEN
                     FDIRNDDTLENPAFLGHTFDAVIANPPYSAKWTADSKFENDERFSGYGKLAPKSKADF
                     AFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYG
                     TSIPTCILVFKKCRQQDDNVLFIDASNDFEKGKNQNHLSDAQVDRIIATYKRKETIDK
                     YSYSATLQEIADNDYNLNIPRYVDTFEEEEPIDLDQVQQDLKNIDKEIAEIEQEINAY
                     LKELGVLKDE"
     gene            22795..24054
                     /locus_tag="OY092_000099"
     CDS             22795..24054
                     /locus_tag="OY092_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCX1075078.1"
                     /translation="MSNTQKKNVPELRFPGFEGEWEEKKLGDLTDRVIRKNKNLESKK
                     PLTISGQLGLIDQTEYFSKSVSSKNLENYTLIKNGEFAYNKSYSNGYPLGAIKRLTRY
                     DSGVLSSLYICFSIKSEMSKDFMEAYFDSTHWYREVSGIAVEGARNHGLLNVSVNDFF
                     TILIKYPSLEEQQKIGKFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKNEN
                     GNDYPDWERIKFFDVIDKVIDFRGRTPKKLNMEWSDEGYLALSAVNVKKGYIDFNVEA
                     KYGNLDLYTRWMRGNELYKGQVLFTTEAPMGNVAQVPDNKGYILSQRTIAFNSNEKIT
                     DNFLASLLSSENVYNDLLKLCSGATAKGVSQKNLNRLYVTIPHSISEQEEIAEFFRKI
                     NQLVELQKYKIEHTKSQKQVFLQKMFI"
     gene            24467..25153
                     /locus_tag="OY092_000100"
     CDS             24467..25153
                     /locus_tag="OY092_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL11"
                     /protein_id="HCX1075079.1"
                     /translation="MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLK
                     DYYKGQSFDLKNIGGYKEGNKVTFIYHNQQIDVTLTGNEKLEFNDDGEISNVDVFVVR
                     ENSDRSGITSSNGGITTSNKQDIIDNVKSVNMQITKKTSSNTETVTSSYYSISKENIS
                     LKELDFKLRKHLIDKNGLYKTEPKNSKIRVTMEDGGFYTFELNKKLQTNRMGDVIDGT
                     KIKEINVELN"
     gene            25175..26659
                     /locus_tag="OY092_000101"
     CDS             25175..26659
                     /locus_tag="OY092_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKLRK protein"
                     /protein_id="HCX1075080.1"
                     /translation="MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASETNQKPSTNQE
                     STAVTHTEQNSKETKTAESSKNFVNLDPIKPGDQKVTGTTMPNHIILLNIDGKSVDSV
                     DGEDSSFITSKEDGKFEYPLNNRKIVHNQEIEVSSSSLDDLGEDDEEVEEDSTEKSEA
                     EEESTGAKVTYTTPRYEKAYEVPEKRLEEKDGHHQVFIEPITEGSGIIKGHTSVKGKV
                     ALSINNKFINFETNSNGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRFDNLELKEG
                     NDISLTFAPDDDEDALKPLIFKTKVTSLEDIDKAETKYDHTKVNKVKILDNVKEDLHV
                     DEIYGSLYHTDKGKGILDKEGTKVIKGKTKFANAVVKVDSELGEAQLFPDLQVNEKGE
                     FSFDSHGAGFRLQNGEKLNFTVVDPITGELLSNEFVSKEIDIEETPEEKADREFDERL
                     ENTPAYYKLYGDKIVGFDTNDFPITWFYPLGEKKVERITPKLEK"
     gene            complement(26766..27074)
                     /gene="spn"
                     /locus_tag="OY092_000102"
     CDS             complement(26766..27074)
                     /gene="spn"
                     /locus_tag="OY092_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myeloperoxidase inhibitor SPIN"
                     /protein_id="HCX1075081.1"
                     /translation="MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHYDAN
                     FLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK
                     "
     gene            27441..28223
                     /locus_tag="OY092_000103"
     CDS             27441..28223
                     /locus_tag="OY092_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075082.1"
                     /translation="MGYLKRFTLYISIFILIVVIAGCGKSDETKEDSKEEQIKKSFAK
                     TLDMYPIKNLKDLYDKEGYRDGEFKKGDKGTWTLLTSFSKSNKPGEIDDEGMVLYLNR
                     NTKKATGYYFVNKIYDDISKNQNEKKYRVELKNNKIVLLDNVEDEKLKQKIENFKFFS
                     QYADFKDLKNYQDGSITTNENVPSYEAEYKLNNSDENVKKLRDIYPITTKKAPILKLH
                     IDGDIKGSSVGYKKIEYKFSKVKDQETTLRDYLNFGPSDEDI"
     gene            28271..29050
                     /locus_tag="OY092_000104"
     CDS             28271..29050
                     /locus_tag="OY092_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075083.1"
                     /translation="MGYLKRIGLCISLLILSIFVTSCDSDNKITGDSKEAQIKKSFAK
                     TLDMYPIKNLEDLYDKEGYRDGEFKKGDKGTWVVRSEMIIQPKGKSLTSRGMILYMNR
                     NTRTTTGYFSIEEIDSRKNLDERETEKKYPVKIINNKIIPTVKIKDEKLKKEIENFKF
                     FVQYGSFKGIENYENGHISYNSEGPIYSARYQLKNDDYNVKELRKRYDIPTEKAPKLL
                     LKGSGDLKGSSVGYKEIEFIFLENKKENIYFSDGLNLIPGD"
     gene            29111..29905
                     /locus_tag="OY092_000105"
     CDS             29111..29905
                     /locus_tag="OY092_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001269759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075084.1"
                     /translation="MRDSKRVVLYISIMVLSIFIIGCNSSSENAKKSKEDSKEDQIKK
                     SFAKTLDMYPIKNLEDLYDKEGYRDGEFEKGDKGTWTIYTDFAKSNKAGELDSEGMVL
                     HLNRNTRTAKGYYFVRKTYNEEDKMLQRKDYRIKLKNNKIVLLDKVEDKKLKHKIENF
                     KFFGQYADFKDLKNYKNGKISSNENVPYYEAEYKIENSDRNVKKLRNVYPITTSESPT
                     LKFHIDGDIKGSSIGYKKVEYIFSKQKDNQISVSDFLNFNPSKDNQ"
     gene            29944..30741
                     /locus_tag="OY092_000106"
     CDS             29944..30741
                     /locus_tag="OY092_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075085.1"
                     /translation="MRNLKRDVLYISIMALSIFIIGCDKSSVTAEKAKEDSKEDQIKK
                     SFAKTLDMYPIKNLEDLYDKEGYRDGEFKKGDKGTWVIRSEMTTELKDENMESKGMVV
                     RLNRNTRTTTGEYFVRIIKEDNEGKVYSDERKYPVKIDNKKIIPLKLIDDEKVKKEIE
                     EFKFFVQYGNFKELENYKDGKVSYNPEVPIYSAQYQLKNSDYNVEQLRKRYNIPTRKA
                     PKLLLKGSGNLKGSSVGYKNIEFTFVENKEENIYFTDSINFNPSEDK"
     gene            30922..31731
                     /locus_tag="OY092_000107"
     CDS             30922..31731
                     /locus_tag="OY092_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075086.1"
                     /translation="MEYIKKIALYMSVLLLIIFIGGCGNMKEEQKKEANTNKTDSKEE
                     QIKKSFAKTLDMYPTENLEDFYNKEGYRDGEFKKDDKGTWLIRSEIVKQPKGKVMKTR
                     GMQLYINRNTKTAKGFFVLKEISENNNRVNKDKEEKYEVKMVGNKIIPTEQINDEKIK
                     KEIENFKFFVQYGKFKNFEKYKNGEFSYNPEAPIYSAKYQLQNDDYNVRQLRKKYDIS
                     TKEAPKLLLKGGGDLKGSSVGQKDIEFTFVERKGENIYFNDSVEFIPSEDK"
     gene            31734..33062
                     /locus_tag="OY092_000108"
     CDS             31734..33062
                     /locus_tag="OY092_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075087.1"
                     /translation="MSKPEYQLNPGKINANTEETSAISYFSYQIENANISGLDKVKMY
                     QQIDILKDRYKFPSNLEYVDSYTDSLTGVTTSAFLNKDTGKVTLGMTGTNLQDEAFKK
                     LKEGEFSRQNFTNALETVKDGYADLKILYSPASDQNYRYANTQEFINKIKSKYDIDFI
                     TGHSLGGRDAVVLGMSNGIPNIVVYNPAPISITSLNPNSPDGKRLLELYKNYKGNITR
                     FVAENDALTENLKKYKHYVFFGNDKVFKNGKGHGMEGFLTKEEQKAIKKELKKLQGYA
                     EENNKSFVKHSNNAISKLASIELLRANMMTTNGGGLSSSQQKVLESLTALTIAQSFSQ
                     LIDDEINQIKKMYNEKKKKFGKNWEDAQKAGKAVGEDLSVNGVLNALDEGQVNESSMV
                     REPEQMISAKERQLSTIGSSVSNYIMRVRLSINEIVDKDQVLASQIGGLL"
     gene            33059..33382
                     /locus_tag="OY092_000109"
     CDS             33059..33382
                     /locus_tag="OY092_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075088.1"
                     /translation="MMFNQINNKNELEESYESEKKRIENELQNLNELRHRTRKENERS
                     YDVFQYLKHEMNYSEDAQRKMTRNIEAYEQEINEIIRKQEWKLEEYKEDLKKSYEKQL
                     DKLSD"
     gene            33401..33715
                     /locus_tag="OY092_000110"
     CDS             33401..33715
                     /locus_tag="OY092_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075089.1"
                     /translation="MTLIEPDMNLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHK
                     HKYKDIENGLKGEEKVLIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKI
                     NS"
     gene            complement(34043..34303)
                     /locus_tag="OY092_000111"
     CDS             complement(34043..34303)
                     /locus_tag="OY092_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075090.1"
                     /translation="MSALLYNGDKDISHERESRCINMLFVILVLYVIGIAFILLSVFG
                     SKTEGLSTKHTLYTIGSAIITIAIFISIGYAIQYLTAALYGL"
     gene            34422..35624
                     /locus_tag="OY092_000112"
     CDS             34422..35624
                     /locus_tag="OY092_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HCX1075091.1"
                     /translation="MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVN
                     IDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGI
                     SEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDE
                     TDERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKVLSALQPTAKIIKTTNSEVD
                     LKEVLNTQRFDFEKASESAGWIKELESGGHASHTPETEEYGISSFVYKRRLPFHAKRF
                     NDWLESMPNNVVRSKGIIWLAQYNHVACLLSQAGSSCNIHPVTYWVASMSEAQQTQIL
                     AERQDVAAEWDPEYGDRHTQFVIIGTELDEEKLTKELDACLVNAQEIDADWQQFEDPY
                     QWQIRPAR"
     gene            complement(36282..36344)
                     /locus_tag="OY092_000113"
     CDS             complement(36282..36344)
                     /locus_tag="OY092_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-4"
                     /protein_id="HCX1075092.1"
                     /translation="MAIVGTIIKIIKAIIDIFAK"
     gene            complement(36408..36476)
                     /locus_tag="OY092_000114"
     CDS             complement(36408..36476)
                     /locus_tag="OY092_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-3"
                     /protein_id="HCX1075093.1"
                     /translation="MEFVAKLFKFFKDLLGKFLGNN"
     gene            complement(36528..36593)
                     /locus_tag="OY092_000115"
     CDS             complement(36528..36593)
                     /locus_tag="OY092_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-2"
                     /protein_id="HCX1075094.1"
                     /translation="MGIIAGIIKFIKGLIEKFTGK"
     gene            complement(36625..36690)
                     /locus_tag="OY092_000116"
     CDS             complement(36625..36690)
                     /locus_tag="OY092_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-1"
                     /protein_id="HCX1075095.1"
                     /translation="MGIIAGIIKVIKSLIEQFTGK"
     gene            37211..38695
                     /locus_tag="OY092_000117"
     CDS             37211..38695
                     /locus_tag="OY092_000117"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase subunit 5"
                     /protein_id="HCX1075096.1"
                     /translation="MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVM
                     PVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHY
                     FPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTF
                     LCGWLAFVGAIVTIYIATGEWRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLI
                     ESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLV
                     QVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNI
                     PKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAF
                     SKGRMARLVGMILIAIVTFIYIITHNYFYDVLRNITTHATTPPTVSVIISVVILIFGS
                     LLSIWVARHRYSKGFAVLYVWLVNLGEARSKAIESHPNYLKKYL"
     gene            38708..41413
                     /locus_tag="OY092_000118"
     CDS             38708..41413
                     /locus_tag="OY092_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbcC family protein"
                     /protein_id="HCX1075097.1"
                     /translation="MTTQLNINSVIENAKRVITPLSPISIFAARNPWEGLEADTFEDV
                     AKWLRDVRDVDIFPNKALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYID
                     NIKTLKDVPTSYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLS
                     EQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKGLPN
                     DPEMTIESVLTHFSIAQEDYQACVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAI
                     RLVVEQLLVGDEFKSVTKDCESRSENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFI
                     HFAATMNKNVFKNLWLIAWEMTYESQLKQKIKAGHESVAGALDVNQVNVLENDNANQP
                     HSVLLNDTQAVDENNSELNQMGTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGF
                     FGLPIQKDAVDEQFKHDSLPVMVPPAYRIKEFADRYDMNVYRQQQQTMSSMFYTFKLM
                     KNNVMPSLLLPELSGPFLSLSTIVNSIMPRKSRASLQKIKQKWLKKPETKLTIDREFD
                     RTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGAC
                     GGASSGFNAKLLAMICNRPNVRQGLKQAGVVIPETTVFAAAEHHTSTDTLAWVYVPDT
                     LSALALDAYESLNDAMPMISEHANRERLDKLPTIGRVNHPVEEAQRFASDWSEVRPEW
                     GLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPALVAQWINLQ
                     YYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRL
                     LVVVQAPDYVVARLLANNDHFARKVSNHWLRLMSVNEEGRFKSWI"
     gene            41575..41937
                     /locus_tag="OY092_000119"
     CDS             41575..41937
                     /locus_tag="OY092_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2294 domain-containing protein"
                     /protein_id="HCX1075098.1"
                     /translation="MKRTKGEIEAEISKAITQWEKDFLGRGSLSVKSDILRDMVIISL
                     QGILTPAEYRVCSTNEGLLNIKRTRSELVESGEQDLNDIILKITGIKVMSFHSDLSTV
                     TGERIIVFKLEDNLEKHI"
     gene            complement(42166..42582)
                     /locus_tag="OY092_000120"
     CDS             complement(42166..42582)
                     /locus_tag="OY092_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075099.1"
                     /translation="MLSIISMCHKFHFTDNIKIIKFILLCILQIKHCIIEITIFCYFQ
                     FSTIYSYYTEGVRRINRVIFVYIALIITLVRFFTPIHPSFSNLIYWIFVLYFIPIILC
                     VIGFKAEKLIATMVIIPNFLGILYRLYAYVTHILFM"
     gene            42620..43294
                     /locus_tag="OY092_000121"
     CDS             42620..43294
                     /locus_tag="OY092_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HCX1075100.1"
                     /translation="MIDKKLTSPKMTVPLFLIALIVFIGMFYSVVTNQEWLKNIDMGS
                     LTWFTDYFGEPQRQYVNNLFNYYMTFSAEIGDVKGVVLISIIITIILFIKQRHLAVWF
                     VTYLVSGVIMNKLIKDTVLRPRPYNHLAVDTGFSFPSGHSNASTLLYFALMIIIISLA
                     AKTITKVLSALVMGILWLSILFCRLYFHAHYFSDVIGGTSLAIIWVALFLMVYPYFIN
                     HRRQRV"
     gene            43331..44065
                     /locus_tag="OY092_000122"
     CDS             43331..44065
                     /locus_tag="OY092_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HCX1075101.1"
                     /translation="MRIKTPSPSYLKGTNGHAILLLHSFTGTNRDVKHLAAELNAQGF
                     SCYAPNYPGHGLLLKDFMTYNVDDWREEVEKAYQFLVNEGYESISATGVSLGGLMTLK
                     LAQHYPLKRIAVMSAPKEKSDDGLIEHLVYYSQRMSNILNLDQQASSAQLAAIDDYEG
                     EITKFQHFIDDIMTNLNVIKMPANILFGGKDAPSYETSAHFIYEHLGSVDKELNGLKD
                     SHHLMTHGEGRDILEENVIRFFNALT"
     gene            44194..44307
                     /locus_tag="OY092_000123"
     CDS             44194..44307
                     /locus_tag="OY092_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075102.1"
                     /translation="MGIVPEVVMWRDVGDIDGVVCGEILAYVYSVEPENLM"
     gene            44472..45809
                     /locus_tag="OY092_000124"
     CDS             44472..45809
                     /locus_tag="OY092_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HCX1075103.1"
                     /translation="MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFL
                     AMFLIFTIFVGLPLLIMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFG
                     FYSVIGGWIVIYIGQVLWQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMII
                     VMLGVEKGLEKASKVMMPLLFVFLIIIVIKSLTLDGALEGVKFILQPRVSEITADGIL
                     FALGQSFFTLSLGTTGMITYASYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHS
                     FGYEPQEGPGLLFKVLPMVFSQMHLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTK
                     NDNTKRKKVAVIGSILVFIISIPATLSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGA
                     LGTTLVVGQLLDKKLLQQYFGKDRFRLFSGWYYLIKYAMPVVIILVFIVQLFS"
     gene            46026..46931
                     /locus_tag="OY092_000125"
     CDS             46026..46931
                     /locus_tag="OY092_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000634108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HCX1075104.1"
                     /translation="MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGK
                     YLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMI
                     ALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSAL
                     QQIDYFVAGIGSGGTFTGTARYLKQHHVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKW
                     PIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGTI
                     VVVFPDGSDRYMSKQIFNYEENDYE"
     gene            46924..48066
                     /locus_tag="OY092_000126"
     CDS             46924..48066
                     /locus_tag="OY092_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional cystathionine
                     gamma-lyase/homocysteine desulfhydrase"
                     /protein_id="HCX1075105.1"
                     /translation="MNKKTKLIHGGHTTDDYTGAVTTPIYQTSTYLQDDIGDLRQGYE
                     YSRTANPTRSSVESVIAALENGKHGFAFSSGVAAISAVVMLLDKGDHIILNSDVYGGT
                     YRALTKVFTRFGIEVDFVDTTHTDSIVQAIRPTTKMLFIETPSNPLLRVTDIKKSAEI
                     AKEHGLISVVDNTFMTPYYQNPLDLGIDIVLHSATKYLGGHSDVVAGLVATSDDKLAE
                     RLAFISNSTGGILGPQDSYLLVRGIKTLGLRMEQINRSVIEIIKMLQAHPAVQQVFHP
                     SIESHLNHDVHMAQADGHTGVIAFEVKDTESAKQLIKATSYYTLAESLGAVESLISVP
                     ALMTHASIPADIRAKEGITDGLVRISVGIEDTEDLVDDLKQALDTL"
     gene            48360..49385
                     /locus_tag="OY092_000127"
     CDS             48360..49385
                     /locus_tag="OY092_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HCX1075106.1"
                     /translation="MIEFRQVSKTFNKKKQKIHALKDVSFKVNRNDIFGVIGYSGAGK
                     STLVRLVNHLEAASSGQVLVDGHDITNYSEKGMREIKKDIGMIFQHFNLLNSATVFKN
                     VAMPLILSKKSKTEIKQRVTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPK
                     ILLCDEATSALDPATTASILTLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGQ
                     VVETGTVKEVFSHPKTTIAQNFVSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQ
                     VTQPIINDLIQICGREVKILFSSMSEIQGNTVCYMWLRFNMDQQFDDTAINQYFKEKN
                     IQFEEVH"
     gene            49389..50048
                     /locus_tag="OY092_000128"
     CDS             49389..50048
                     /locus_tag="OY092_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075107.1"
                     /translation="MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITR
                     KQGIWPNIVIHQVLNPLINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYV
                     APYIARLVENSLLEVDEGIIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLI
                     GSTAMAGAVGGGGIGDLALVYGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRR
                     H"
     gene            50085..50927
                     /gene="gmpC"
                     /locus_tag="OY092_000129"
     CDS             50085..50927
                     /gene="gmpC"
                     /locus_tag="OY092_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter
                     glycylmethionine-binding lipoprotein"
                     /protein_id="HCX1075108.1"
                     /translation="MKRLIGLVIVALVLLAACGSNNDKKVTIGVASNDTKAWEKVKEL
                     AKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTV
                     LAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVK
                     DITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAV
                     KPYINIVAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIET
                     SLAK"
     gene            51260..52267
                     /gene="aaa"
                     /locus_tag="OY092_000130"
     CDS             51260..52267
                     /gene="aaa"
                     /locus_tag="OY092_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autolysin/adhesin Aaa"
                     /protein_id="HCX1075109.1"
                     /translation="MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKY
                     GISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLS
                     LIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNSASNSSRPSTNSSGGSYY
                     TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNR
                     GYNTPVFSHQNLYTWGQCTYHVFNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRP
                     TVGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTYRTVPAYQVNNYRYI
                     H"
     gene            complement(52452..52721)
                     /locus_tag="OY092_000131"
     CDS             complement(52452..52721)
                     /locus_tag="OY092_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075110.1"
                     /translation="MAKRSKSQRLSSLLNVAGFIVDGYNGYKYHAKNKKLVYLSLGLS
                     TVGTVLDFYISIKSPRKFKKAVAVVTLITNGARLFTSIRKVKHEY"
     gene            52870..53265
                     /locus_tag="OY092_000132"
     CDS             52870..53265
                     /locus_tag="OY092_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HCX1075111.1"
                     /translation="MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVQALL
                     REVKEELNLTLTMDEIEYIGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITD
                     IRWMDKDNDALIAPAVKVWIETYGGKHDK"
     gene            53255..53740
                     /locus_tag="OY092_000133"
     CDS             53255..53740
                     /locus_tag="OY092_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075112.1"
                     /translation="MTNNDTIMLRHYVPQDYSMLEAFQLSESDLKFVKTPEENITAAM
                     SDNERYPIVVMDGRQCVAFFTLHRGKGVAPFSDNQDAVFFRSFSVDQRYRNRGIGKVV
                     MEKLASFITSTFQGINEIVLTVNTDNPHAMALYRQQGYQYMGDSMFVGRPVHIMALTI
                     K"
     gene            complement(53909..54691)
                     /locus_tag="OY092_000134"
     CDS             complement(53909..54691)
                     /locus_tag="OY092_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HCX1075113.1"
                     /translation="MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLI
                     IFGVPIYVVTFFFCIIIGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGH
                     LQGFSTEQQDETYVYSMNIGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNP
                     TLTQYELFQSGMRVGREILATSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFA
                     QEFISIILGGIAVAISIPITAWITAFLIKRPSRQRKNDESIN"
     gene            complement(54688..55806)
                     /locus_tag="OY092_000135"
     CDS             complement(54688..55806)
                     /locus_tag="OY092_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HCX1075114.1"
                     /translation="MFLKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQ
                     IIDVKHVSSTPTKDAQNNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFR
                     THEKVLLHISNKPSDAYIIEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSI
                     AILIAIYIHIQHSNINLFLLMTIAMICSTVLTLLLVTGWHMRTLITIASTIIGTFLSI
                     GLTELIIYMTDGKGIKYETMNFLSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEIL
                     QRTPHISMRRWALAGRYIGQDIMGTMTNILLFSYLSGALPMFLIFLKNANTVTYTISM
                     NWSLEIARALTGGIGIVLTIPITILFMEIFETLRRAKQ"
     gene            complement(55921..56805)
                     /locus_tag="OY092_000136"
     CDS             complement(55921..56805)
                     /locus_tag="OY092_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1075115.1"
                     /translation="MEIKQLRYFIEVAKREHISETALELNIAQSAISRQITLLEQELN
                     VSLFKKQGRNITLTSEGKLLFNEALRIIEHLDSTIEQFQSHGLTKNKSIYIGYDESDV
                     SHMLLPLIQTFHLQNDTHVIPNLLEHDTIINSVLNGNIDIGFTELTPEIRKHKQLHML
                     PLFEEHYHLYAPSDDPITMATHPPLIQFEHSHIYCLAPFAETVKKQLRKITKSDVYTI
                     SSQPLAQYLLRQKEGYIISSQNIHLPESKSWIDIKLDHTELKRTICAITKEPYTKSDI
                     GILLTLIQQLMTKTSTFH"
     gene            56986..61485
                     /gene="gltB"
                     /locus_tag="OY092_000137"
     CDS             56986..61485
                     /gene="gltB"
                     /locus_tag="OY092_000137"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HCX1075116.1"
                     /translation="MHNEKLIKGLYDYREEHDACGIGFYANMDNKRSHDIIDKSLEML
                     RRLDHRGGVGADGITGDGAGIMTEIPFAFFKQHVTDFDIPGEGEYAVGLFFSKERVLG
                     SEHEAVFKKYFEGEGLSILGYRNVPVNKDAIAKHVADTMPVIQQVFIDIRDIEDVEKH
                     LFLARKQLEFYSTQCDLELYFTSLSRKTIVYKGWLRSDQIKKLYTDLSDDLYQSKLEL
                     VHSRFSTNTFPSWKRAHPNRMLMHNGEINTIKGNVNWMRARQHKLIETLFGEDQHKVF
                     QIVDEDGSDSAIVDNALEFLSLAMEPEKAAMLLIPEPWLYNEANDANVRAFYEFYSYL
                     MEPWDGPTMISFCNGDKLGALTDRNGLRPGRYTITKDNFIVFSSEVGVVDVPESNVAF
                     KGQLNPGKLLLVDFKQNKVIENNDLKGAIAGELPYKAWIDNHKVDFDFENIQYQDSQW
                     KDETLFKLQRQFAYTKEEIHKYIQELVEGKKDPIGAMGYDAPIAVLNERPESLFNYFK
                     QLFAQVTNPPIDAYREKIVTSELSYLGGEGNLLAPDETVLDRIQLKRPVLNESHLAAI
                     DQEHFKLTYLSTVYEGDLEDALEALGREAVNAVKQGAQILVLDDSGLVDSNGFAMPML
                     LAISHVHQLLIKADLRMSTSLVAKSGETREVHHVACLLAYGANAIVPYLAQRTVEQLT
                     LTEGLQGTVVDNVKTYTDVLSEGVIKVMAKMGISTVQSYQGAQIFEAIGLSHDVIDRY
                     FTGTQSKLSGISIDQIDAENKARQQSDDNYLASGSTFQWRQQGQHHAFNPESIFLLQH
                     ACKENDYAQFKAYSEAVNKNRTDHIRHLLEFKACTPIDIDQVEPVSDIVKRFNTGAMS
                     YGSISAEAHETLAQAMNQLGGKSNSGEGGEDAKRYEVQVDGSNKVSAIKQVASGRFGV
                     TSDYLQHAKEIQIKVAQGAKPGEGGQLPGTKVYPWIAKTRGSTPGIGLISPPPHHDIY
                     SIEDLAQLIHDLKNANKDADIAVKLVSKTGVGTIASGVAKAFADKIVISGYDGGTGAS
                     PKTSIQHAGVPWEIGLAETHQTLKLNDLRSRVKLETDGKLLTGKDVAYACALGAEEFG
                     FATAPLVVLGCIMMRVCHKDTCPVGVATQNKDLRALYRGKAHHVVNFMHFIAQELREI
                     LASLGLKRVEDLVGRTDLLQRSSTLKANSKAASIDVEKLLCPFDGPNTKEIQQNHNLE
                     HGFDLTNLYEVTKPYITEGRRYTGSFTVNNEQRDVGVITGSEISKQYGEAGLPENTIN
                     VYTNGHAGQSLAAYAPKGLMIHHTGDANDYVGKGLSGGTVIVKAPFEERQNEIIAGNV
                     SFYGATGGKAFINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVINLGDVGKNFG
                     QGMSGGIAYVIPSDVEAFVENNQLDTLSFTKIKHQEEKAFIKQMLEEHVSHTNSTRAI
                     HVLKHFDRIEDVVVKVIPKDYQLMMQKIHLHKSLHDNEDEAMLAAFYDDSKTIDAKHK
                     PAVVY"
     gene            61503..62966
                     /locus_tag="OY092_000138"
     CDS             61503..62966
                     /locus_tag="OY092_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HCX1075117.1"
                     /translation="MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGA
                     RCMDCGTPFCQTGQQYGRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFT
                     GRVCPAPCESACVMKINRESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGS
                     GPAGLTAAEELNLLGYQVTIYERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGIT
                     FINGVEVGVDIDKATLESEYDAIILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQL
                     LNGEIDDITITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKYTKLPEAITFTE
                     NASWPLAMPVFKMDYAHQEYEAKFGKEPRAYGVQTMRYDVDDKGHIRGLYTQILEQGE
                     NGMVMKEGPERFWPADLVLLSIGFEGTEPTVPNAFNIKTDRNRIVADDTNYQTNNEKV
                     FAAGDARRGQSLVVWAIKEGRGVAKAVDQYLASKVCV"
BASE COUNT        22318 a         9070 c        12125 g        19720 t
ORIGIN      
        1 ggctaatgtg taagaaccac tacataataa attattagtg gctctttatc atttctgtcc
       61 cactccctac aggttgaata aacgtgcgaa gaaacctttt ttctcttctt gaggtttagg
      121 ttctgacatt tcagactgtg aagctgtgct gtcattttct gctttcgctt ccaatgaatc
      181 gttcgaagta gcttgtttag aagcttctgc atgggcttct gctacttgtt gttcagcatc
      241 atgttgcgct tctgcatcta ctgtagcttc tttatttgaa gtctcagctg cattgtcatt
      301 tttagactgc tcaacgctgg ctttttcaat tgcttcagtt gcagaaattt gatcctcttt
      361 atctacttta gtagtagtgc catcgcctgc attgtctgct ttagtatccg tcttagcgtc
      421 tgttgatgta ttcactccag caaccttcga atctttactg tcagcctttt catcagtagc
      481 ggacttagca tcaactttat ttgttgattc agccaatact ttagcttgag atgcttgtgc
      541 ttcttggata gcctcttgtg atgtttggat ggcttttaag gattcgctat ttgaatcgat
      601 tttagatgta agttgatttt gaagttcttt taattcttgt tgttgctgat gtacttgatt
      661 catcatttga ccaagtaggt gacgttcttc gcgcattttc tggatttcta ggcgtaaatc
      721 ttctactaat tgagcgacat tttgattagt aggtaagttt ttgtcatcgt ttttgacaat
      781 gacttgcagg aagtcttttt ctttttctaa ttcatcaaac gctagatcat aactatttgt
      841 ttgttttact ttgtcggcaa tgtctttgaa aagctcgata tcttcttctt tgaaatcagt
      901 tgcttcacga ccacgatatt cagtcttgct tagttggtaa ccacgttctt ctaaatgttg
      961 aacaatttta cggacttgct tctcacttag ttctacgcgt tgtgcaaatt ctttagttaa
     1021 catactttaa agtcctttct gcatatactt tatgtatact gacgtttgtc tacgggcagt
     1081 gaaacgtcag tcttgcttca tacatagttt aaacgttatt gttagtgatt tcaagtttgt
     1141 ttaaaatggt ttacgtaaat ccatttcttc taataaagca taaataattt cacgtgcgat
     1201 accattggca aatacatact tcaaaatata atttgattta acacttgtac cgtagatatc
     1261 ctttgtcagt ttaatatttt tctttaaaaa taagtccact tttttagtgt gaccatcatt
     1321 agttggatga atgtaatcaa tttcagtttg tctttcaaat tgatgttcgt ataaaaactg
     1381 tctacggtgt tcaataatga ggccgttatc ttgtgttaaa tctgcaggtt ctttagggac
     1441 ttccatcatt aaaaagttaa tacttctaga atgaacaagg tttgataata agtttagttc
     1501 atgttcaatt tgatgtaatg tttgcgtcat taactcatca tggttgggta ggtcttttgc
     1561 gaataaataa attaaaaatg ctgaattggt tgtggcttca taatgtgcag ttgctagact
     1621 gacaacaaca tcgttttcta agcctacgat aaaaacataa tcgttttcgg ttttgttgtt
     1681 ttctaatgag cgtttgatga tacgtttatc ttcagttaaa gataaattta acttagtatc
     1741 gtaaagttta agtgcttcgt tgtaatgtgg atctttgaca gattgaatgg ttttaaattc
     1801 cataagaaca cctccccaat ttaaataata ttatagcata atcgcctgct gtaaaagact
     1861 gttcataaac ttttaaatgg tataaaaaac tgtactatct taaattagac agtacagtaa
     1921 tctcattttg aattcagtgt gataactaag ctttgggacc tttagatgct tcagcaaaat
     1981 gtgtaatatc aatctcttca taagctgaat tattttcatg cacttcttga tgtgatgatt
     2041 tgtcacgaac cgctacaact aacattttat cgtctaaaat aagttgttta tatttttcta
     2101 attcatcagg cgctaagttg tagcgtgata aaactgcatg ttcaccatct tctcctgtta
     2161 acagtttagt cattctatca ctaaatgttc cacttgttga gataagggag atttcagagt
     2221 cgtgtaagtc atttaggttt aatttacttt tactaataat tgttagctct gattctaaat
     2281 aaccttcaga tttcttttga ttgattacgt tgtataattc gccagtgtca tttactacag
     2341 taatatctgc catagttgtc gcccctttaa aaatttgttt atttaatctt ttacccttct
     2401 tattataaag taaaaccctt acattattaa gttataagtc ttcattcgca ttaaacgtct
     2461 ctgtacattt ataaaactat taaaagatta cctaagcagt tattgaaaaa atgccgaaaa
     2521 tttgctatta tcgttaaata atttacataa actcatataa tctaaagaat atggctttag
     2581 aagtttctac catgttgcct tgaacgacat gactatgagt aacaacacaa tactaggagt
     2641 agcttcagcc attaaattgt aaccatggtg ggtgatttat atcattttat atgatggtca
     2701 cagtttattt gatgaaactt cttttacatt gattgcatga caaattcgtt atgcatgttc
     2761 gttcactcat aaaccctgaa actattattt agtttgggga tttttttgta tctagcacca
     2821 atttaagagc aaaatgtttc acacaaatct gaggaggttt taagagtgga gttactagga
     2881 caaaaagtaa aggaagacgg cgttgtcatt gatgagaaga ttttaaaagt cgatggattt
     2941 ttaaatcatc aaattgatgc aaagttaatg aatgaagttg gtcgcacttt ttacgagcaa
     3001 tttaaagata aagggattac taaaatctta accattgaag cttccggtat cgcacctgca
     3061 atcatggctg cactgcattt tgatgtgcca tgtttatttg cgaaaaaagc aaaacctagc
     3121 actttgacgg atggttatta tgaaacatct attcattcat ttactaaaaa taaaacaagt
     3181 acggtcattg tttcaaaaga atttttatca gaagaagata ctgtactcat catcgatgac
     3241 tttttagcaa atggtgatgc ttcattagga ttatacgata tcgcacagca agcgaatgct
     3301 aagacagctg gtattggtat tgttgttgaa aagagtttcc aaaatgggca tcaacgttta
     3361 gaagaagcag gtttaacagt ttcttctctc tgcaaggttg cttcactaga aggaaacaaa
     3421 gtgacattgg tgggagaaga ataatgaaaa atttaatcct aagtgttcaa catcttttag
     3481 ctatgtacgc aggtgccatc ttagttccaa tcattgttgg tacaagtttg aagtttacac
     3541 ctgaacaaat cgcttactta gttacagtag atatatttat gtgtggggtt gccacatttt
     3601 tacaagccaa taaagtaaca ggaacaggat taccaatcgt tcttggatgt acattcacgg
     3661 ctgttgcgcc catgatttta attggtcaaa cgaaaggaat agatgtactt tatggttcgc
     3721 tatttttatc agggatatta gttattatca tcgcgccttt cttttcacat cttgtaaaat
     3781 tcttcccacc agtagtaacg ggtagtgttg ttactatcat tggtatcaat ttaatgccag
     3841 tagcaatgaa ttacttagct ggaggtcaag gtgcaaagga ctatggagat gttaagaaca
     3901 ttttgttagg tttaatgaca ttaatcatta ttcttgtttt acaaagattc acaactggat
     3961 ttattaagag tattgccata ttaattggac tcgttttagg aacgataggc gctggcttac
     4021 ttgggatggt cgatattaat caagtcaatc atgccggttg gttaggcatc ccagtgccgt
     4081 ttagattctc aggatttagc tttgatgtga catcgacgtt agtgttcttt attgtagcta
     4141 tcgttagttt aattgagtcg acaggtgtct atcatgcgtt aagtgaaatt accggtaaga
     4201 agttagaaag aaaagatttt cgtaaaggtt atactgcgga aggtctagcg atagtgttag
     4261 gttctatatt caattcattt ccgtatacag cctattcgca aaatgtagga cttgtttctt
     4321 tatccggcgc taagaaaaac aatgttatat acggcatggt cgtgttattg cttatatgtg
     4381 gttgtatacc taagcttggt gcattagcaa atatcatacc gctacctgtg ttaggtggtg
     4441 cgatgatagc tatgtttggc atggtaatgg catatggtgt tagtatatta ggacatatcg
     4501 attttaaaaa tcaaaacaat ttattaatta tcgctgtatc agtaggatta ggtactggta
     4561 taagcgctgt accacaagca tttaaaggtt taggtgaaca atttgcatgg ttgactcaaa
     4621 acggaattgt tttaggcgca atctctgcaa ttattcttaa tttctttttt aatggaataa
     4681 agtataaaca aacggaagaa aatgtgaaat aatataacta attaatttga aaaatggagg
     4741 ctgtttttaa tgtgggaaag taaatttgca aaagaatcat taacgtttga tgatgtgtta
     4801 ttaattccag cacaatctga tattttaccg aaagacgttg atttaagcgt acaattatca
     4861 gacaaagtta aattgaatat tccagttatt tctgctggta tggatacagt aactgaatct
     4921 aaaatggcga ttgctatggc tcgtcaaggt ggtttaggtg ttattcataa aaatatgggc
     4981 gttgaagaac aagcggacga agttcaaaaa gtaaaacgct cagaaaatgg tgttatttca
     5041 aacccatttt tcttaacacc agaagaaagt gtttatgaag cggaagcatt aatgggtaaa
     5101 taccgtattt caggtgtacc aattgttgat aataaagaag atcgcaactt agtaggtatt
     5161 ttaacaaacc gtgacttacg ttttattgaa gacttctcga ttaaaattgt agatgtaatg
     5221 acgcaagaaa atttaattac agctccagtg aatacaacac ttgaagaagc agaaaaaatt
     5281 ctccagaaac ataaaattga aaagttacca ttagttaaag acggacgtct agaaggtctt
     5341 attactatta aagatattga aaaagttatc gaattcccta atgcagcaaa agatgaacat
     5401 ggtcgtctac ttgtagccgc agcaattggt atttcaaaag atactgatat tcgtgctcaa
     5461 aaattagtcg aagcaggtgt ggatgtctta gttatcgata cagcacatgg tcactctaaa
     5521 ggtgttatcg atcaagtgaa acatattaag aagacttacc cagaaatcac attagtagca
     5581 ggtaacgtag caactgcaga agcaacaaaa gatttatttg aagcgggtgc agatattgtt
     5641 aaagttggta ttggcccagg ttcaatttgt acgacgcgtg ttgtagcagg tgttggtgta
     5701 ccacaaatta cagcaattta tgattgtgca actgaagcac gcaaacatgg taaagctatc
     5761 attgctgatg gtggtattaa attctcagga gatatcatta aagcattagc tgctggtgga
     5821 catgcggtta tgttaggtag cttattagca ggtactgaag aaagtccagg cgcaacagaa
     5881 attttccaag gtagacaata taaagtatac cgtggtatgg gctctttagg tgcgatggaa
     5941 aaaggttcaa acgatcgtta cttccaagag gacaaagcac ctaagaaatt tgttcctgaa
     6001 ggtatcgaag gacgtacggc ttataaaggt gcgttacaag atacaattta ccaattaatg
     6061 ggcggtgtgc gtgctggtat gggttatact ggttcacacg atttaagaga attacgcgaa
     6121 gaagcacaat ttacacgtat gggtcctgct ggtttagcag aaagccatcc acataatatt
     6181 caaattacga aagaatcacc gaactactca ttctaattaa gataaaggag aacgacaaat
     6241 atggaaatgg caaaagaaca agagttaatc cttgtcttag actttggtag ccaatacaac
     6301 caattaatta cacgccgaat tcgtgaaatg ggcgtttata gtgaattaca cgatcatgaa
     6361 atttcaattg aagaaattaa gaaaatgaat ccaaaaggta tcatcttatc aggtggtcca
     6421 aattcagttt atgaagaagg ttcatttaca attgatccgg aaatatataa tttaggaatt
     6481 ccagtacttg gtatttgtta cggcatgcaa ttaactacta aattattagg tggtaaagtt
     6541 gaacgtgcca atgaacgtga atacggtaaa gcaatcatta atgcgaagtc agatgagtta
     6601 ttcgttggct taccagcaga acaaactgtt tggatgagtc attctgataa agttattgaa
     6661 attccagaag gctttgaagt tatcgctgat agcctaagca cagactatgc agcaatcgaa
     6721 gataagaaac gtcgcattta tggtgttcaa ttccatccag aagtacgtca tacagaatat
     6781 ggtaatgatt tattaaataa ttttgtccgt cgtgtttgtg attgtaaagg tcaatggaca
     6841 atggaaaact ttatcgaaat cgaaattgaa aagattcgtc aacgcgtagg agaccgtcgt
     6901 gtattatgtg cgatgagtgg cggcgtagat tcatctgttg tagctgtact attgcataaa
     6961 gcaattggtg atcaactaac atgtatcttt gtagaccatg gcttacttcg taaaggtgaa
     7021 ggcgacatgg ttatggaaca attcggtgaa gggttcaaca tgaatattat tcgtgttaat
     7081 gcgaaagatc gttttatgaa taaattaaaa ggtgtttcag atcctgaaca aaaacgtaaa
     7141 atcattggta atgaatttgt atatgtattt gatgatgaag catcaaaact caaaggtgta
     7201 gacttccttg cgcaaggaac actatataca gacgtcatcg aatcaggtac taagacagca
     7261 caaacaatca aatcacacca caatgttggt ggattaccag aagacatgga attcgaatta
     7321 atcgaaccaa tcaatacatt gtttaaagat gaagtacgta aattaggtat tgaactaggt
     7381 attccagaac atttagtgtg gagacaacca ttcccaggac ctggtcttgg tattcgtgta
     7441 cttggagaaa ttactgaaga taaactagaa atcgttagag aatcagacgc gattttacgc
     7501 caagtgatta gagaagaagg tcttgaaaga gaaatttggc aatacttcac agtgttacca
     7561 aacattcaat cagtaggtgt tatgggagac taccgtacgt atgatcacac agtaggtatt
     7621 cgtgcagtaa catctatcga cggcatgaca agtgattttg cacgcatcga ttgggaagtc
     7681 ttacaaaaga tttcaagtcg tatcgtaaac gaagtagacc acgtcaaccg cgtagtctat
     7741 gacattacat caaaaccacc aagcacaatt gagtgggaat aattatatat agcaaatgat
     7801 aggctagaag taccgttatt acgcggtttc tagccttttt tggtgcgatt ggtatgggca
     7861 acatcatgtg atgaaatgat gggagttata tctgtagaaa ttggcgtacc aatttcttta
     7921 tgttggggct ccgcagtcaa ctactaccaa tataagattg tagagcctac gatttggatt
     7981 ttatgtcctg ggatcggttt cctattctta ttaaatagta tttaaaaatc tatactatct
     8041 atattgaaat ttttatttat ggttatgcca taactacttt gtatttccgg tactaaactt
     8101 tgcaatattg ggtaatagtt attagcgaaa ccaataataa tggaattaat cacattgata
     8161 ctaagttctt tatcttcagg taatgcattt tctattattt tgattaagtc tatatatttt
     8221 atttcatcag aatttttatg tgctaaatac ttcataaaat cagtttgcac tttttcgaaa
     8281 acactatatc ttaagtccat ttgtacaaat attaagctga cagttttagt ttcgaattga
     8341 ctttgaccca aaactgaagc aagttcttct attgattgat atagcaatct gatatcgccg
     8401 ttatcttcaa gcatatgaaa cactccttta tcattttaga ataaccatgc aatggcttct
     8461 ttgactacag ttgagattat tccagcatca cctttactta gaccggcatt tattgcgcct
     8521 cgtttaactg catcaccgac agcgttagct ggtacttctg accattttag caatggtttc
     8581 aattctttta caatacctga atacccttta tcaaaaatag ttgcagcttt tttgccgcca
     8641 acttgttgta tgacattttt tgctttgccc ctattattaa taattagctt tatagcagtt
     8701 ttaactactt ttgttccgcc aattcgttgt tgtgcttctg gattcattgg caagtttgga
     8761 ttgcgattaa ttttcacacc atttatattt tcataacttt ggtgagcagt ttttgtattg
     8821 tttgtctgta tttcatttgc gttagttaaa ggtgaaacag acgttaataa aacggcagtc
     8881 aagactagtg aaccaatagt ttttgtgatt ttcattatac atttatctcc tttaatagtg
     8941 aatttgcaaa accaaatgtt tgaaatataa gtaaataatc attaaaaaac aaagtgagtg
     9001 aaaggtccta attcgtataa ctagcattta ataatttaat taatcgtttg caccaaaata
     9061 gaaaatgcca cttaacacaa ttattaaaag taatgtaact atgaaagaag tccaagctaa
     9121 tacaagtgaa catattaaaa gtactaatga agtgactgtt tgtaagaacc caaaaagtaa
     9181 agattccatt atataagcaa aataaatagt tagtgaaaaa attgctacag caaataacat
     9241 tagccctatg attttcaaaa ttccagttgt gtagccagta actaataaat ttttcacatg
     9301 aacttgatta ccatattgtc atcccgttca taaaatagtt tagaagagat tgctattaaa
     9361 tttaattgtt ttgcataagt gtcagaatat tattcttaac tgttaagagt cgttaattta
     9421 tttaaatcca ttaaggttgt tagagattat tatgcggtga gaaacgcgac tgttacagtg
     9481 gaagatgaat ttgtataact agatatgtta atcgtaaatg tggcgtcgtg aaacacgact
     9541 tcaaacatcg aggaccaatc tatctttgag attggttgaa gattgaaaca tatgtaagaa
     9601 aatgacatag tttatggaaa ggtcgataag taattgaaaa atcaatctag attgaaatca
     9661 tgcatatcgt ttaataaaat ttttcggaga aataaaaact tactaaaaat gaaaaggttt
     9721 atttgattta tttacttgta tattgtaaaa ggttacaatg agtctataga ttatgtagag
     9781 aactctatta tgctttttga gtatatgtgg ggttctttct ttatatataa aaggagttcg
     9841 gagtggcaac actaaaagat gtaaagactg gtaaaaagga aattttgcca tcaactgcaa
     9901 aagataaaaa tggtaaaaaa gttacgttaa tttattttga aaaagacgat aaattaggtt
     9961 tttatgtgca gaaaacacaa aaagaacgtg gagtagggaa atgcgtttct ggtatagcgg
    10021 gtggcgcagt gacaggaggc actactttag gtcttgcagg tgcaggagta ggaacagtta
    10081 ctattccagt aattgggaca gttagtggag gcgtagttgg agctgttggt ggtgctgtcg
    10141 gcggtggtct aaccggtgga gccacattct gctaatagtg taggagtgat accatgaaaa
    10201 aattttttaa tatatgggta tgttcgttct tattttttag taataatatc atgggtgata
    10261 attagtataa aatttggtaa tatcagcacg acgcaaatat taatttcaaa tctgtttata
    10321 tttatcgctt atatactata tttagttaag ttcattcgtt tcaaaaaaag atgaaaatac
    10381 gttttttgcc caaaacctaa ttgtgatagc atatgaaaag tgagtagtgt ccttttttta
    10441 atctaattta cttatgaagc gaaaataacg tgcaagtaac gtgcaagtaa aaaaacgacc
    10501 taaatccctt taaaaacaag gattaggtcg tatttatttg gtaatgaatt tgtctagcga
    10561 aaataacgtg caagtaacgt gcaaataaaa aagcatgcgt aatatggtat atattttata
    10621 tgtctaggta aagtttacga acctacagat ttgaaatatt cttcagcaac tccgtctttt
    10681 ataattcttg aaataaccga ggtttttatt tttacgttgt tttgaattgt ctaaaatagt
    10741 catacataat ctgtttaaac ccttacttaa gcttgtaaaa tgcggaaata agttttcctt
    10801 ttttagttat tttttcttgg tatattttaa atccacaatt attgcaataa aattctttca
    10861 aattcttatt atcataccaa tcaacacaaa tatgtcttag tgcagtacga tcataaattt
    10921 cagaagcaat agataaggca tagtccatta caatttctcc tggtatatgc tttttgtgtt
    10981 tatcgctcct atctaattta gttattaata atgcttgaaa ttctccattc tttttagcat
    11041 cagacgagat ttttcttttc gtttttccac taacgtcttt ttcaagcttt atatttataa
    11101 tttttaagca gaagtatccc attatttcaa ggtctgattt atctataatt aaatacgtac
    11161 ggaaggaatt ttgatcgttc attgttattg ctttatgttt tagggaatgt gctattgaag
    11221 ggtttaaaga tgtttgaaat gtcttggttt cttgacttat atagttatga aagagggcgt
    11281 tgtcctttat agcatttctg agattagaaa tgctataaat aaagttatta agattttttg
    11341 ttttcatgta atttaagaaa tggatttgtt tttagtgggt tatttttaat tctgttctta
    11401 aatggtttga attttgcggt tgcaaatatg atagcagctt cttttgacaa agtaatagaa
    11461 cctttttctt ctggtaccat gatattcact ccttgtacaa ttggatttaa agtttataaa
    11521 ataattttac tatgtataat aatttgtgta aatagtttct tattgttacc gaataatttg
    11581 tttggaagcg ttatgtaatg ccaatcaaca ccaaagtcct catgtcctca ttccttttgc
    11641 gactacatat attgttaata atattgaaat tataaactga tagtgataat tttgttaact
    11701 gacccatgaa agtaggaacc ccaccatacg ggaatttcga aatcatggtt tttttgtttt
    11761 aaagtattga tgcaatagat aaagtagcca ttctaatata tggagtattt atcagctaaa
    11821 aattaaaaca gatatgaatt ttcttcatta aatcattttt ccatatagaa acagaggcaa
    11881 cgctactgtc acctctgctt gaaataatta ggttgaaata ctctgggtct aaagtccaca
    11941 cctaaatcac ccaaatcgct caaactctca accccagact aaatctccaa accccaaaac
    12001 accaatactt accaaagcat tgaaatgagt gccaatactg gcaacgtacc ttgtttgaaa
    12061 aagatactaa tattgcttga aaggccacca taaatagcaa cgccaatgat atacactaaa
    12121 atagctgcgc atatttcttt tggattactg ctgataaaca aaccgtatat tagcaaaact
    12181 ccgattaaac cattatatac gccttgattc ttcaaaagta cgttaatatt tttgtctttc
    12241 aatttatcga cgcttatatt aaatgtctcg ctagtctttt tggaagttgt agcaatcgtt
    12301 tcaaggtaca taatatagaa aaattctaat gccacaaata tgattaaaat tatcgagatg
    12361 atattcactg taacgctcct ttagtattaa atattttctt gtaaaaatga ttgtagtgtc
    12421 tgtggttgat cattgactaa ttgttggaaa tcattggatt cttggtctaa tagtcctctt
    12481 gctcctgcgt cgtacattga tgccaataat gcaccaaagc ctttaggttc atcgtacatt
    12541 tttgcaaatg tctctaatga aacgggttca tatttaattt ctgtgcctga tgcctcagat
    12601 aaaatagcag caagttcttt catatcataa ctgtagcctg ataataaata acatttgccc
    12661 caagtatctg gatttttaat aatagcaatg acgcctctag caatatcatt tctagtaata
    12721 taattaatac gaccatcacc agctggataa atcagtttat gcatattcat caattctggt
    12781 aaatatggtt taagtggatc catgtacatt gccattctta cataggtata gtcaatgcca
    12841 cttgttgcca atagacgtgc tgcataacca aaataaggac tcatatggaa tggattatta
    12901 tgctgatctg cgtaataacc tatgaaaatg atatgagcaa cgccacattg ctttgcagca
    12961 tatactaaat tttccacttc aggaatacgt ttgaatgatg gatggataat acttggaata
    13021 aacacaacgg tatccattcc tttaaatgct tctaccatgc tttcttgatt aaaataatct
    13081 aattgtcgaa cagaaacttt tccacgccaa tcttctggaa ctttctcaac atttctaaca
    13141 ccaatgtgaa aatgatctat gtgatttgca atggcttgat ttgtaatatg tgtgcctaaa
    13201 tgacctgtag cacctgttaa cataatattc attcacttca tctcctaatc tttatataca
    13261 taacataata cttattcgat ggttttcaaa acatttgatt ttataaaaag ttgtaatctg
    13321 tatttattgt cgtcgtgtat agtaaatacg tatatgttat taatgttgaa aataccgtaa
    13381 tgacgcgttt tagttgatgt gtgtcaccat gatctttgaa atttttgaca tggtactgcg
    13441 acgatatggt gtcatttttg tgtctaaaag ttttacagtt tttaaaatta aaatggtata
    13501 aagtgtgaat tgtataaaaa agagtctcga cggataagaa ttgattaata acagttagca
    13561 ttttattaat taccttaaca atgattcaag tttagttaaa tgaggtttaa tttgaaaggg
    13621 gatagcgcct caatataatg taggtagatt gttcatatta cgtaattgaa aaatcaaatt
    13681 taaatagatt ggggctaaaa attatgaaat ttaaagcgat agcaaaagca agtttagcat
    13741 tgggaatgtt agcaacaggt gtaattacat cgaatgtaca atcagtacaa gcgaaagcag
    13801 aagttaaaca acaaagtgag gctgatttaa aactttatta tagtggacca agttttgaat
    13861 ataaaaaagt aactggatat ggatttgttg aaggtaaaga tagattcatt gattttatat
    13921 acaatggaca atataataaa atatctttag ttggttctga taaagataaa tataatgaag
    13981 aagttaatcc agatatagat gtgtttgtcg ttagagaagg aaacggtaga caagctgata
    14041 atcattcgat tggtggcgta acaaaaacta atcgaggagt gtattatgac tatatacaca
    14101 caccaatcct tgaaatcaag aaaggtaaag aagaaccaca aagtagtcta taccaaattt
    14161 ataaagaaga catttcgcta aaagaacttg attatagatt aagagaacgt gcaatcaaac
    14221 atcacggctt gtattcaaaa ggtcttaaac aaggtcaaat tacaattaca atgaatgatg
    14281 gcacaacaca tacaatcgat ttaagtcaaa aacttgaaaa agagcgtatg ggtcagtcag
    14341 tagacggcaa acaaatacaa aaaattctag tagaaatgaa ataatacttt ctaacaacaa
    14401 agcactacgc tgaatagcac ttgttttgga atatatggaa gttaagcgac gtactgttgc
    14461 ttagcttctt tttttgaggg tcaaagttac aaaactcaca caaacagtcg caccacgcat
    14521 tatcttttac ttaactagct taatcatatt ttatgaatag ttaaaaaagg gttaatgtga
    14581 atatcagaat acagctccta taatatggtt gtatgattca atttacgtaa taaaacaatc
    14641 taatctaata tattggagca tacaactatg aaaatgaaat caattgcaaa agtaagttta
    14701 gtcttgggta ttttagctac aggtgtaaat actgtaacgg aacaaccggt gcatgccgaa
    14761 aataaaccta ttcaagtaag ccaaaatagt aaaaatttaa aagcgtacta tactcaaccg
    14821 agtgttgaat ataaaaatgt gacaggttat atcagtagta ttcaacctaa agcaggtact
    14881 aaatttatga atattataga aggtaataca gttaataatc tagctttagt tggcaaagat
    14941 aagcaacact atcatacggg tgtacatcgt aaccttgata ttttttatgt taatgaggat
    15001 aagagatttg aaggttcaaa gtactctatt ggtggtatca cagaagcaag cgataaagct
    15061 gttgaccaaa tagcagaagc aagagttatt aaagaagatc atactggtga atatgattat
    15121 gactttttcc catttaaaat agataaagaa gcaatgacat tgaaagaggt cgattttaaa
    15181 ataagaaaac atcttatcga tcattatggt ctttacggtg aaatgagttc aggaacagtt
    15241 actgttaaaa tgaaatacta tggcaagtat acatttgaat tagataaaaa gttacaagaa
    15301 gaccgaatgg ccgatatcat taaagtcaca gatattgaca gaattgaagt tatagttaaa
    15361 aaagcataat gcttagactg gtcgtcgtaa tgaattgaaa ttgcaataga gaggttaagt
    15421 gatgataaaa cgttacttaa cttctttttt atgtcttaaa atcatttcaa tgatacgtag
    15481 taacaccaca taaacctcga aagtactcat tattttttgc ttaaatgact taataatact
    15541 tcaacaattg ttaaacgagg gttaatgtga atagaccaat atgtcctcta taatgaagtt
    15601 gtatgattct aattacgtaa agaacaatcg aatataatta cgattggagc atacaactat
    15661 gaaaataaga acaattgcga aagcgagttt agcgttaggg cttgtaacaa caggtgcaag
    15721 tatagtaaca acgcaatcgg ccaatgcaga agtagcatca gcacttaaag caggacagtt
    15781 agcaaagata aacgtatcat caagtgcagt cacaacgaca acgcaagcag tgaacgcaga
    15841 acaaaatcgt acggctaata ctgaacaggc atcaaagtct aatacagaaa aagtatcaac
    15901 atcgccttca attaaaacag aacagacgcc aaaatctaac acacaaaagg caactcaacc
    15961 aacaccaagc ggaacaactc agcctttacc aaatgcacaa ccgcaatcac cacaatcaac
    16021 accaaacgca tcaacatcgc cttcatctag tgtagaaaca caacaaccgc aatcgcctac
    16081 cacaaaacaa gcacaaaagg aaataaaccc taaatataag gatttaagaa catattatac
    16141 gaaaccgagt ttagaattcg aaaagcaatt tggttttatg ctgaaaccat ggacgacagt
    16201 taggtttatg aatgttatac cagattggtt catttataaa atagctttag ttggaaaaga
    16261 cgataagaaa tataaagatg ggccatacga taatattgat gtatttatcg ttttagagga
    16321 caataaatat caattaaaaa aatattctgt cgggggtatc acgaagacga atagtaaaaa
    16381 agttgatcac aaagcaagaa tcagtattac taaagaagat gagaaaggca aaatctcacg
    16441 cgatgattca gaatacaaga ttactaaaga agagatttcc ttgaaagagc ttgattttaa
    16501 attgagaaag caactcattg aacaacataa tctgtacggt aatattggtt caggaacaat
    16561 tgttattaaa acgaaaaatg gtgggaagta cacgtttgaa ttacacaaaa aattacaaga
    16621 acatcgcatg gcagatgtca tagatggcac tagtatcgac agaattgaag tgaatctaaa
    16681 atcatcgtga tggatactgc atagaaccta tgaacgatgt gccgagaagt tgagtgacaa
    16741 ctatttacat gttgctcagc ttctttcgtg ttgcgcagtg atataagaag acgaatattt
    16801 gatgttgacc acacataaca tacttatgtc ctaaatgtgt ctaaaaatcc caatctatca
    16861 agcgttgaag tacaacaaaa gtcattttta tttaacgaac attatggatt ccttaattta
    16921 attaacgatg attcaaattt agttaaacaa ggtttaatgt gaatagagtc atacgccaac
    16981 tataataaag ctgtgtgatt caataaacgt aatcgaacaa gtctaataat tacgattgga
    17041 gcatacaact atgaaaataa gaacaattgt gaaagccagt ttagctctaa gtattttagc
    17101 aactggggtt ataacatcaa cggctcaaac tgtaaatgcg agtgaacatg aagcaaaata
    17161 tgaaaatgtg acaaaagata tctttgactt aagagactac tatagtggtg aaagtaaagc
    17221 gcttaaaaat gttatcggtt atcactatag taaaggcggt agacactacc ttgtcattga
    17281 taaaaataga aagttcacaa gagtacagat atttggtaaa gatattgaaa gatttaaagc
    17341 acgcaaaaat ccgggattag acatatttgt tgttaaagaa gcggaaaacc gtaatggtac
    17401 agtttattcg tatggtggtg ttactaagaa aaatcaaggc gcctattatg attatataaa
    17461 cgcaccaaga ttccaaatca agagagatga aggtgacggt attgctacgt acggtagagt
    17521 acactacatt tataaagaag aagtatcact taaagaattg gattttaaat tgagacagta
    17581 tttaattcaa aattttgatc tgtataaaaa gtttcctaaa gacagcaaga taaaagtgat
    17641 aatgaaagat ggcggctatt atacgtttga actcaataaa aagttacaaa caaaccgcat
    17701 gagtgacgtc attgacggta gaaatattga gaaaatagaa gccaatatta gataattcaa
    17761 taaaacatgg ataatagtaa aatatggata gtatagagga gttaggcagc ataggttgct
    17821 tagcttcttt tttgtgtcgt tatgatcgga aatgaagcgg gttgatgaaa gataataacg
    17881 acaataaaac ttgtaaaaat agttgatacc tatagtcgca cggtgtcgca ttagtgacgt
    17941 gaaacaatgt ggaaaacata attaaattga aggaaagtgt taatggtgaa aaaaattagc
    18001 atagtgttat aaaaaatgat taatactgtt aggaatccat taattagctt aacgttggtt
    18061 catgaatagt taaaaagtgg ttaattcata gcgcaatatc cggcttatat aatgatagta
    18121 gattgttcgt attacgtaat tgaattaatc atataagcat atattaagtt aaattttaaa
    18181 aatagattgg gagaataata ctatgaaatt aaaaacgtta gctaaagcaa cattagcatt
    18241 aggtttatta actactggtg tcattacatc agaaggtcaa gcagtaaaag cggcagaaaa
    18301 gcaagagaga gtacaacatt tacatgatat tagagattta catcgatact actcagcacc
    18361 aagttttgaa tatagtaata ttagcggtaa ggttgaaaac tacaatggtt ctaacgttgt
    18421 acgctttaac caaaaagatc aaaatcacca attattctta ttaggaaaag ataaagaaga
    18481 atataaagaa ggtcttcaag gtcaaaatgt ctttgtagta caagaattaa ttgatccaaa
    18541 cggcagacta tctactgttg gtggtgtaac gaagaacaat aacaaaactt ctgaaactaa
    18601 aacacaatta gttgttaata aagttgatgg cggagattta catgcatcaa ttgactcatt
    18661 tttaatccaa aaagaagaaa tctcattaaa agaacttgat ttcaaaatta gacaacaatt
    18721 agttaataat tacggattat ataaaggtac atctaaatac ggtaaaatca ttatcaattt
    18781 gaaagacgaa aataaagtag aaattgattt aagtgataaa ttgcaattcg agcgcatggg
    18841 cgatgtgttg aatagtaaag acattagagg tatagcagta actattaacc aaatttaaag
    18901 taagcaatca atgactttaa agtaataaat tttgaagcag cttaacgatg aaacgttgaa
    18961 taaatacgca tatcctacaa gaggagcgtg tttaaagtaa cgccgtcgtt cggctgtttt
    19021 ttatatttaa taacgcaggt cacgagtata ctaaaaaaac caaattagac gtgaaagcta
    19081 tgtgctttga atattactta gatgttcatt aacaatgatt caaagttatt taaacgcacg
    19141 ttaatgtcag tttgtttcga tgcactttat aataaaggca gatgtttcaa attacgtaat
    19201 cataacaatc caatacatta agattggagt aaataaatat gaaattgaca gcattagcaa
    19261 aagcaacatt agcattagga atattaacta caggtgtgtt tacagcagaa agtaaagccg
    19321 ttcacgcgaa agtagaactt gatgagacac aacgcaaata ctatatctat atgttaaaag
    19381 attactattc tgaagaaagc tatgaaccaa caaacattag tgttaaaagt gaagattatt
    19441 atggttctaa cgttttaaac tttaaccatc gaaataaaaa cttcaaagta tttctacttg
    19501 gtgatgataa aaataaatat aaagaaaaaa cgcatggtct tgatgtcttt gcagtacctg
    19561 aattaataga tactaaaggt ggcatatata gcgttggcgg tataacaaag aaaaatgtga
    19621 gacccgtgtt tggctgtgta agtcatccag gtttactagt taaaaaaatc gatcctaaac
    19681 atggcttttc ggtaaatgag ttgttcttta ttcaaaagga agaagtatcg ttgaaagaac
    19741 ttgattttaa aataagaaaa atgttagtcg aaaaatatag attgtataaa ggcgcgtcag
    19801 ataaaggtag aatcgttatt aatatgaaag acgaaaagaa atatgtaatt gatttaagtg
    19861 aaaaattaag ttttgatcgt atgtttgatg taatggatag taagcaaatt aaaaatattg
    19921 aagtgaattt gaattaatta agcataatag cataatagat taagaagcga cttaacaaca
    19981 aaatgtgaat tgacatgcat gtccttaaat aaggaactgt gttaaataca ttaatgttgt
    20041 taagttgttt tttgcatttc aaagtgcaga acagagtatc aacatttgtt gtagtaaaca
    20101 atgatccaga aaaacaacca catgtaaaga gtgaaagtta attaatctgg ccattaaaat
    20161 atatttgttt ttcattaata ataattcacg tatatttaaa ttgaggttaa ttatcgcatt
    20221 aaacgatgga cgttataatt agagtgtatg attcaaatta cgtaataaaa caatccaata
    20281 cattaagatt ggagtaaata aatatgaaat tgacagcatt agcaaaagca acattagcat
    20341 tagggatttt aacaacagga actttaacaa cagaggctta ttcaggtcat gctaaacaaa
    20401 atcaaaagtc agtaaacaaa catgataaag aagcattaca ccgatactac agtggaaact
    20461 ttaaggaaat gaaaaacatt aatgctttga gacatggtaa aaataactta cgttttaaat
    20521 atagaggtat gaagactcaa gtattattgc ctggagatga gtaccgtaaa tatcaacagc
    20581 gaagacatac aggcttagat gtgttttttg ttcaagaaaa aagagacaag cacgacatat
    20641 catatactgt tggtggcgta acaaagtcga ataaaacacc tgggtttgtt agtgcaccat
    20701 tattaaatgt tacaaaagaa aatggtgaag atgcttttgt gaaaggttac ccttatgata
    20761 ttaaaaaaga agaaatatca ctaaaagaat tagattttaa gttaagaaaa catctaattg
    20821 aaaaatatgg tctttataaa acaaaatcaa aagatggcaa gattaaaatt aacttgaaag
    20881 atggcagctt ttataacctt gatttaagat ctaaattaaa attcaaacat atgggggaag
    20941 tcatagatag taaacaaatt aaagatattg aagtgaattt gaagtaaata attacgaata
    21001 agaaaaatta attgaagtgg cttaacgatg aaatgtaaat tggtgtgcac accttaccaa
    21061 agggatgcat taatcgatat cgtcgttaag tcgttttttt cgttttatgg attctacccc
    21121 aatttccata aagataaaat ttccaccacc aacatcaaaa ttctcaacat cgtaacatca
    21181 ccaaatgtta taataaatct attacacaaa gagataaatt acttattcaa aggcggagga
    21241 atcacatgtc tattactgaa aaacaacgtc agcaacaagc tgaattacat aaaaaattat
    21301 ggtcgattgc gaatgattta agagggaata tggatgcgag tgaattccgt aattacattt
    21361 taggcttgat tttctatcgc ttcttatctg aaaaagcaga acaagaatat gcagatgcct
    21421 tgtcaggtga agacatcacg tatcaagaag catgggcaga cgaagaatac cgtgaagact
    21481 taaaagcaga attaattgac caagtcggtt acttcattga gccacaagat ttattcagtg
    21541 cgatgattcg tgaaattgaa acgcaagatt tcgatatcga acatttggcg acggcaattc
    21601 gtaaagttga aacatcaaca ctaggtgaag aaagtgaaaa tgactttatc ggactgttca
    21661 gcgatatgga tttgagttca acgcgtttag gtaacaatgt caaagaacgt actgcgttaa
    21721 tctctaaagt catggttaac cttgacgatt taccattcgt tcacagtgac atggaaattg
    21781 atatgttagg tgatgcatac gaatttctta tcgggcgctt tgcggcgaca gcgggtaaaa
    21841 aagcaggcga gttctataca ccacaacaag tatctaagat actggcgaag attgtcacag
    21901 acggtaaaga taaattacgt cacgtgtatg acccaacatg tggttcaggt tcactgttgt
    21961 tacgtgttgg taaagaaaca caagtgtatc gttatttcgg tcaagaacgt aacaatacca
    22021 catacaactt agcgcgtatg aatatgttat tacatgatgt gcgttatgaa aatttcgata
    22081 tccgtaatga tgatacgttg gaaaacccag cctttttagg ccatacattt gatgcggtta
    22141 ttgcgaatcc accgtatagt gcgaaatgga cagcagattc aaaatttgaa aatgacgaac
    22201 gatttagtgg ttacggcaag cttgcgccaa aatccaaagc agactttgcc tttattcaac
    22261 acatggtaca ttacctagac gatgaaggta ccatggcagt tgtgctacca catggcgtct
    22321 tattccgtgg ggctgcagaa ggtgtgattc gtcgttattt aatagaagaa aagaactacc
    22381 tagaagccgt gattggctta ccagccaata ttttctatgg gacaagtatt ccaacatgta
    22441 ttttagtatt taaaaaatgt cgccaacaag acgacaacgt attatttatc gatgcatcca
    22501 atgattttga aaaaggaaaa aatcaaaacc atttaagcga tgcccaagtc gatcgtatta
    22561 tagccacata taagcgtaaa gaaacgattg ataaatatag ctacagcgcg acattacaag
    22621 agattgccga taacgattac aacctaaata taccgagata tgtcgacaca ttcgaagaag
    22681 aagagccaat tgatttagat caagtccaac aagatttgaa aaatattgac aaagaaatcg
    22741 cagaaatcga acaagaaatc aatgcatacc tgaaagaact tggggtgttg aaagatgagt
    22801 aatacacaaa agaaaaatgt gccagagttg agattcccag ggtttgaagg cgaatgggaa
    22861 gagaagaagt taggggatct tacagataga gtaattagga aaaataaaaa cttagaatcg
    22921 aaaaagcctt taacaatatc cggacagtta ggtttaattg atcaaacaga atactttagt
    22981 aaatcagttt cgtcgaaaaa tctagaaaat tatacactaa taaagaatgg agaattcgcg
    23041 tataacaaaa gttattctaa tggataccca ttaggggcta ttaaaagatt aactagatat
    23101 gatagtggtg tattgtcctc tttgtatatt tgtttttcta ttaaaagtga aatgtctaaa
    23161 gacttcatgg aagcatattt tgattcgaca cactggtata gagaagtttc tggaattgca
    23221 gttgagggtg caagaaatca cggattatta aatgtttctg tgaatgattt ttttactatt
    23281 ctaattaaat atccaagttt agaagaacag caaaaaatag gcaagttctt cagcaaactc
    23341 gaccgacaaa ttgaattaga agaacaaaag cttgaattac ttcaacaaca gaaaaaaggc
    23401 tatatgcaga aaatcttctc acaggaattg cgatttaaga atgagaatgg taatgattat
    23461 cctgattggg aaagaattaa attttttgat gtaattgata aagtaataga ttttagaggg
    23521 agaacaccaa aaaaattaaa tatggaatgg tctgacgaag ggtatttagc attatcagca
    23581 gtcaatgtaa aaaaaggcta tattgatttt aatgtagagg cgaaatatgg aaatctagat
    23641 ttatatacta gatggatgag aggaaatgaa ttatataagg ggcaagtatt atttacaact
    23701 gaagcgccaa tgggcaatgt agcacaggtt ccggataata aaggatatat attaagtcaa
    23761 agaactatcg cgtttaattc aaatgaaaaa atcactgata actttttagc atcattgttg
    23821 agctctgaaa atgtttataa tgatttatta aaattgtgta gtggtgctac agcaaaaggt
    23881 gtgagtcaaa aaaatttaaa tcgactatac gttactattc cacattccat atcagagcaa
    23941 gaagagattg ctgaattctt tagaaaaatt aatcaattgg ttgagttgca aaaatataaa
    24001 attgaacata ctaaaagtca aaaacaagtg tttttacaaa agatgtttat ttaagcattt
    24061 gagcacatct atcaattaag tattaataaa ataatcttaa attggccgat tttccttatg
    24121 taacttttag taactaaaaa tacccgattc gctatgataa aaaagcgaac attaaattta
    24181 gacactgtga aagcgcagtg tcttttttgt gtcgaaattg tgtacagaat aagtggttaa
    24241 ataaagatta agttgagata aagtgttatt cgtaaataaa agagagtaga tcgataggaa
    24301 ttgaatgata ttagttaact atttattaaa ttacttaata atgattaatt tttagttaaa
    24361 gtaagtttaa tgtgaagcac gaccattgct cattataatg aatgaggatt gttcgtattg
    24421 cgtaatagaa taaatcaaat agactaaaaa ttgggagcat agaattatga aattaaaaaa
    24481 tattgctaaa gcaagtttag cattagggat tttaacaaca gggatgatta caactactgc
    24541 tcagccagta aaagcaagta cattagaggt tagatcacaa gcgactcaag atttaaaaga
    24601 ttattataaa ggacaaagtt ttgatctgaa aaatatagga ggatataagg aaggcaacaa
    24661 ggttactttc atatatcaca atcaacaaat tgatgtgaca ctaacaggta atgaaaagtt
    24721 agaatttaat gacgatggag aaatatctaa tgttgatgta tttgtggtca gagaaaattc
    24781 tgatagatca ggtatcacaa gttctaatgg aggaataaca acttcaaata aacaagatat
    24841 catagataat gtcaaaagtg tgaacatgca aataactaaa aaaactagta gtaatactga
    24901 aactgtaact tcatcttatt acagtataag taaagagaat atctcattaa aagaacttga
    24961 tttcaaatta agaaaacact taatcgacaa aaacggtctt tataaaacag aacctaaaaa
    25021 cagcaaaatt agagttacca tggaagatgg tgggttttac acatttgaat tgaataaaaa
    25081 gttacaaaca aaccgcatgg gtgatgtaat tgatggtact aaaataaaag aaattaatgt
    25141 tgaattaaac taataatatt cgagggagta aatcatgagg gaaaatttta aattacgtaa
    25201 aatgaaagtc ggtttagtat cagttgcaat tactatgtta tatatcatga caaacggaca
    25261 agcagaagca tcagaaacta atcaaaagcc aagtacaaat caagaatcaa cagctgttac
    25321 acatactgaa caaaattcaa aagaaacaaa aacggcagag tcttctaaga actttgttaa
    25381 tttagaccct atcaaaccag gagatcaaaa ggtaacaggg actactatgc cgaatcatat
    25441 tatattactt aacatagatg gaaaaagtgt tgattcagta gatggagagg acagttcatt
    25501 tataacttca aaagaagatg ggaagtttga gtatcctcta aataatcgta aaatagttca
    25561 caaccaagaa attgaagtat catcttcatc tttagatgat ttaggtgaag atgatgaaga
    25621 ggtagaagaa gattccactg aaaaatctga agctgaagaa gaaagtacag gtgctaaagt
    25681 tacttacaca acaccgcgat atgaaaaagc gtatgaagta ccggaaaaac gattagaaga
    25741 aaaagatgga catcaccaag ttttcatcga acctattact gaaggatcag gtattattaa
    25801 agggcatacg tctgtaaaag gtaaagttgc tttatctatt aataataaat ttattaattt
    25861 tgaaacaaat tctaatggtg gcccaaataa agaagaagcg aaatctggat cagaaggaat
    25921 ctggatgcct attgatgata aaggatactt taattttgac ttcaaaacga aacgtttcga
    25981 taatttagag ttaaaagaag gtaatgacat ttcactaaca tttgcacctg atgatgatga
    26041 agatgcatta aaacctttaa ttttcaaaac taaagtaaca agtttggaag atattgataa
    26101 agcagaaact aaatatgacc atactaaagt caacaaagtg aaaattttag ataatgttaa
    26161 agaagattta catgttgatg aaatatatgg aagcttatat catacagaca aaggtaaagg
    26221 tattcttgat aaagaaggta ctaaagtaat taaaggaaag actaaattcg cgaatgcagt
    26281 agtgaaggta gactctgaac taggtgaagc acaattattc cctgatttac aagtaaatga
    26341 aaaaggtgaa tttagctttg actcacatgg tgctggtttt agattacaaa atggagaaaa
    26401 actaaacttt acagtagttg atcctattac aggtgagctg ttgagtaatg agtttgtttc
    26461 taaagagatt gatattgaag aaacaccaga agaaaaagca gaccgtgaat ttgatgaaag
    26521 acttgaaaat acgcctgctt actacaagtt atacggcgat aaaatagttg gtttcgatac
    26581 taacgatttc ccgattactt ggttttatcc attaggtgaa aagaaagttg aacgtataac
    26641 acctaaatta gaaaaataat taataaaata aaacagctta atgatgtaat gaaattagtg
    26701 agttaatcac tgacttcaac gtcattgagc tgttttttgt gctttgttac aaagcattat
    26761 tgaatttatt ttacgtgttc atattttgaa acatcaaagc cgtcttgttt agctttgttg
    26821 ataatgtctt tgattgaatg tagtccttta tcggcgaagt atgatcttaa gttgtctttt
    26881 gtagcttggt cagcattctt atctaataac acatcaatat aacttaattc atgttctaag
    26941 aagtttgcat cataatgtag tacgagtcca ttttgagaat aaactttcgc atctgcttga
    27001 ttaccatatc caacaacgcc agttgctaaa acacctacca ttgccgtagc tactaaaacc
    27061 tttttaaatt tcatatccat cactcctcta aaaattgtaa ctccatcata acactgaata
    27121 ttaagaaaat tacgtttatt aagtcgattt aatgattttt aataaatagt taaagtgaca
    27181 aatattgcta aaaagcaatt aatctctaat acgatactta tgaattttcc tactaaaacc
    27241 ttgatttcaa agagggttta aatcaaatga aacaataata aaaaaatgat gcaacttaat
    27301 aataagtaca aatttaatta agaaattaaa ttgattgtat atgtatattt tggtaacgta
    27361 aaagagaaat atacaaaata attaattatt tatatgaaaa gagaatataa atgaagtata
    27421 aaacagagag acgtgaagcg atgggatatt taaaaaggtt tacattgtac ataagtattt
    27481 ttattttaat agttgttata gcaggttgtg gtaaaagtga tgaaacaaaa gaagattcca
    27541 aagaagaaca aattaaaaag agctttgcga aaacgttaga tatgtatcca atcaaaaatc
    27601 tcaaggattt atacgacaaa gaaggctata gagatggcga atttaaaaag ggcgataagg
    27661 gtacatggac tttactcaca agtttttcaa aaagtaacaa accaggcgag atagatgatg
    27721 aaggtatggt gctatatcta aataggaata ccaaaaaggc aacaggttat tattttgtaa
    27781 ataaaattta tgatgatatt agcaaaaatc agaatgagaa aaaataccgt gttgaactta
    27841 aaaataataa gattgttctt ttagataatg tagaagacga aaaacttaaa caaaaaattg
    27901 aaaattttaa attttttagt cagtatgccg attttaaaga tttaaaaaat tatcaagatg
    27961 gaagtataac aactaatgaa aatgtaccga gctatgaagc agaatacaaa ttgaataata
    28021 gtgatgaaaa tgtaaaaaaa cttagagata tttatccaat tacaacgaaa aaggctccaa
    28081 tattaaagtt acatatagat ggtgatataa aaggaagttc agttggatac aaaaaaatag
    28141 aatataaatt ttcaaaagtt aaagatcaag agacaacatt aagagattat ttaaattttg
    28201 ggccgtctga tgaagatatc taaagtttat tagatataga aataattcta aaacagagag
    28261 acgtgaaatg atgggatatt taaaaaggat tggattgtgc ataagcctgt tgattttaag
    28321 catttttgta acatcttgtg atagtgataa taagatcact ggagattcaa aagaagcaca
    28381 aattaaaaag agttttgcaa aaactttaga tatgtatcca attaagaatc tcgaggattt
    28441 atacgacaaa gaaggatata gagatggtga atttaaaaag ggagacaaag ggacgtgggt
    28501 tgttagatct gaaatgataa ttcaaccaaa aggtaaaagt ttaacttcaa gaggcatgat
    28561 attatacatg aatagaaata ctaggaccac aactggttat ttttcaatag aagaaataga
    28621 ttcaagaaaa aaccttgacg agagagaaac agaaaaaaag tatcctgtga aaattataaa
    28681 caataaaatt attccaaccg taaagataaa agatgaaaag ttgaaaaagg aaattgaaaa
    28741 ctttaagttt tttgttcaat atgggagttt taaaggaata gagaattatg aaaatggtca
    28801 catttcctac aattctgaag gtcctattta ttccgcgaga tatcaactga aaaatgatga
    28861 ttataatgtt aaagaattac gaaaaagata tgatatacca acagaaaagg cgcccaaatt
    28921 attgttgaaa ggttcggggg atttgaaagg gtcttcagtt ggatataagg aaattgaatt
    28981 tatatttcta gaaaataaaa aagaaaatat atatttttca gatggattaa acttaattcc
    29041 aggtgactaa aaataacaca aaggttgatg gtgctcaaca aatattaaca tgatagagag
    29101 aagtgaaaaa atgagggatt caaaaagagt agtattgtac ataagcatta tggtgttgag
    29161 tatttttata attggttgta atagttcaag cgagaatgca aaaaaatcaa aagaagactc
    29221 aaaagaagac caaatcaaaa agagttttgc gaaaacgtta gatatgtatc caattaagaa
    29281 tctcgaggat ctatatgaca aagaaggata tcgagatggc gaatttgaaa aaggtgataa
    29341 ggggacgtgg acgatatata cagattttgc caaaagtaat aaagcgggtg aattggatag
    29401 tgaaggtatg gtattacatt tgaatagaaa tacgcggacg gctaaaggat attattttgt
    29461 aagaaaaact tataacgaag aggataagat gctgcaaagg aaagattatc gtattaaact
    29521 taaaaataat aaaattgtcc ttttagataa agtagaagat aaaaaactca aacataaaat
    29581 agaaaatttt aaattttttg ggcaatatgc agattttaaa gacttgaaaa attataaaaa
    29641 cgggaaaata tcgagcaatg aaaatgttcc atattatgaa gcagagtaca aaatagaaaa
    29701 tagtgataga aatgtaaaaa aacttagaaa tgtttatcca attacaacca gtgaatcgcc
    29761 aactttaaaa tttcatatag atggggatat aaaaggtagc tcgataggat ataaaaaagt
    29821 ggaatatatc ttttcaaagc aaaaagataa ccaaatttct gtcagtgatt ttttaaattt
    29881 taacccatca aaagataatc agtagagatt caataaaaaa tcagacaaga aagatgtgga
    29941 ataatgagaa atttaaagag agacgtattg tacataagca ttatggcttt gagtattttt
    30001 ataataggct gtgataaatc tagtgttact gctgaaaaag caaaagaaga ctcaaaagaa
    30061 gaccaaatca aaaagagctt tgcgaaaacg ttagatatgt accctattaa gaatctcgag
    30121 gatttatacg ataaagaagg ataccgtgat ggcgaattta aaaagggtga taaggggacg
    30181 tgggttatta gatctgaaat gacaacagaa ctaaaagatg aaaatatgga atccaaaggt
    30241 atggtcgtac gtttaaatag aaataccaga acaactacag gtgagtattt tgttaggata
    30301 atcaaagaag acaatgaggg caaggtatat agtgatgaac gaaaataccc agtcaaaatt
    30361 gataataaaa aaattattcc attaaaatta atcgatgatg aaaaagttaa aaaagaaatt
    30421 gaagaattta aattctttgt acaatatggg aattttaaag aattggaaaa ctataaagat
    30481 ggtaaagtgt catataatcc agaagtacca atttactctg cgcaatatca attgaaaaac
    30541 agtgattata atgtagagca actacgtaag cgatataata tcccaacaag aaaggcgcct
    30601 aaattgttat tgaaaggctc aggtaattta aaaggatcct cagtcggata taaaaatatt
    30661 gaatttacct ttgttgaaaa taaggaagaa aatatttact tcacagatag tattaatttc
    30721 aacccaagtg aggataaata agtatattta gtattataaa aaacacgtta gaacatttaa
    30781 taataaagtt aaatgaatta catgtattaa attgaataag ttagttttgt ttgataacat
    30841 aaaagtgcaa taatcactat tttattaagt tgtatgaaat attcaaatgt ttataaaatt
    30901 aaagcagaga gatgtgaaat gatggagtat ataaaaaaaa ttgctttgta catgagtgta
    30961 ttacttttaa tcatttttat tgggggatgt ggaaatatga aagaagaaca gaaaaaagaa
    31021 gcaaatacaa ataaaacaga ttcaaaagaa gagcaaatca aaaaaagctt tgcgaaaacg
    31081 ttggatatgt atcctactga aaatctagaa gacttttata acaaagaggg atatcgagat
    31141 ggagaattta aaaaagatga taaaggtact tggctaatta gatctgaaat agttaaacag
    31201 ccaaagggca aagtgatgaa aacaagaggt atgcaattat atattaatag aaataccaaa
    31261 acagccaaag gtttctttgt tttgaaagaa ataagtgaaa ataataatcg tgtaaataaa
    31321 gataaggagg aaaaatacga agtgaaaatg gtaggaaata aaattattcc tactgaacaa
    31381 attaatgacg agaaaataaa aaaagaaatt gaaaacttca agttttttgt gcaatatgga
    31441 aagtttaaaa atttcgaaaa atacaaaaat ggtgagtttt catataatcc agaagcacca
    31501 atttattcgg ctaaatatca attacaaaac gacgattaca atgtaaggca actacgtaaa
    31561 aaatatgaca tttcaacaaa agaagcgcct aagttacttt taaaaggtgg aggggattta
    31621 aaaggttcct cagttggtca aaaagatatt gaatttacat ttgttgaaag aaaaggtgag
    31681 aatatttatt ttaatgatag tgttgaattt ataccaagtg aggataaata aatatgagta
    31741 aaccagaata tcaactaaac ccaggtaaaa taaatgcaaa tacagaagaa acatctgcta
    31801 tatcctattt tagttatcaa attgaaaatg caaatattag tggtttggat aaagtaaaaa
    31861 tgtatcagca aattgatata ctaaaagata gatacaaatt cccttctaat cttgaatatg
    31921 ttgatagtta cactgattct cttactggag taacaacttc tgctttttta aataaagata
    31981 caggcaaagt aactctcggg atgactggga ctaatttaca agacgaagcc tttaaaaagt
    32041 taaaagaagg tgaattttca agacaaaatt ttaccaatgc tttggaaaca gttaaagatg
    32101 gatatgcaga tcttaaaata ttatattctc ctgcatctga tcaaaactat agatatgcga
    32161 atacacaaga atttataaat aaaataaaaa gtaagtatga cattgatttt attactggtc
    32221 attcactagg tggaagagat gcagtagttc taggaatgag taatggtatt ccgaacattg
    32281 tggtttataa tccagctcct atttctataa ctagtttgaa tcctaattcc ccagatggaa
    32341 aacgattgtt agagttatat aaaaattata aaggtaatat tactaggttt gttgcagaaa
    32401 atgatgcatt gacagaaaat ctgaagaaat ataagcatta tgtttttttc ggtaatgata
    32461 aagtctttaa aaatggtaaa ggtcatggaa tggaaggctt tctgaccaaa gaagaacaaa
    32521 aagctataaa aaaagaacta aaaaaactac aaggttatgc agaagaaaat aataagtcat
    32581 ttgtaaagca ttcaaataat gctatctcta aattagctag tatagaatta cttagagcaa
    32641 atatgatgac tacaaatgga ggaggattat cttcttcgca gcaaaaagtt ttagaaagtt
    32701 taacagcttt aacaattgcg cagtcattca gtcaactgat agacgatgaa attaatcaaa
    32761 tcaaaaaaat gtataatgaa aagaaaaaga aatttggaaa aaattgggaa gacgctcaaa
    32821 aagctggaaa agctgtaggt gaagatttga gtgtaaatgg agttctcaat gctttagatg
    32881 aaggtcaagt gaatgaaagt agtatggtaa gagaacctga acaaatgata tctgcaaaag
    32941 aaagacaact ttcaacgata gggtcttctg tatcaaatta tattatgaga gttagactca
    33001 gtattaatga aatcgttgat aaagatcaag tgcttgcatc acaaataggt ggattactat
    33061 gatgtttaat caaattaata ataaaaatga attagaagaa tcatatgaat ctgagaaaaa
    33121 acgtatagag aatgaactgc aaaatttaaa tgaacttagg catagaactc gaaaagaaaa
    33181 tgaacgtagt tatgatgttt ttcaatattt gaagcacgaa atgaattata gtgaagatgc
    33241 ccaaaggaaa atgacgagaa atatagaagc gtatgagcaa gaaatcaatg agataattag
    33301 aaagcaagaa tggaaattag aagaatataa agaagactta aaaaagtctt atgaaaagca
    33361 gttagataaa ctaagtgact gataatttgg aggagattaa atgactctaa tagaaccaga
    33421 tatgaactta agaatgccag atataagtac tacagtagaa acacttaatc tcatatctaa
    33481 aatggaagcg caaaaagaaa atattcgcac agttattgca cctgaacata agcataaata
    33541 taaagatatt gaaaatgggt taaaaggtga agaaaaagta ttaattgaac aaatggcgca
    33601 gcattgcgaa gcttttaaag ctaattttaa aggcgcagct caaggagatt gggttaaaag
    33661 tgctatgtct gagattgaca gcattaagga tgacctgaaa aaaattaata gctaaactac
    33721 atatcatatt aataaataaa gctcccttca aaattttcat tttttcaatg tctactttgg
    33781 agggagcgct tcagtatatt cacaactgac actaggccgc ttctttttaa tttattttat
    33841 tcccatgtaa agtaattcga accgaatgga cataccacac tcacaattgt aaaaacacaa
    33901 cttaaattac tgtcccgcat taaacatatc cacattccaa acagcaacaa caaaatcctc
    33961 aagtaccaaa agctatgacc actttatcaa aatcaacgca agtcaacatc gaccgaacta
    34021 cttgccatta atcatcctca ccttacaaac cataaagcgc tgcagttaag tattgaatgg
    34081 catagccaat tgaaatgaaa atagcaatcg ttataatagc actgccaatg gtatataacg
    34141 tatgtttcgt agataatcct tcagtctttg aaccaaaaac actgagtaga ataaatgcaa
    34201 taccaatgac atataaaact aaaatgacaa atagcatgtt tatacacctc gattctcttt
    34261 cgtgagatat atctttgtct ccattataaa gtaaagcgct caataattta attaagtata
    34321 ctattttttt attatcgaag attgcgaaag atgaaacgct cctatataat gtaaaacgga
    34381 attattccta tttacaaata aattgaagtg agggtatata tatggctaaa attccagtta
    34441 cggtattaag tggttattta ggctcgggga aaacaacatt gttaaatcat attttacaaa
    34501 atcgtgaagg tcgacgtatc gcggtaattg taaatgatat gagtgaagtt aatatcgata
    34561 aagatcttgt cgcagatggt gggggactat cgcgtacaga tgaaaaatta gtcgaactct
    34621 ctaatggttg tatctgttgt acacttagag atgatttatt aaaagaagtt gagcgtttag
    34681 tgaaaaaagg tggcatcgat caaattgtta ttgagtcaac agggatttca gagccagtac
    34741 ctgttgcaca aactttctca tatattgatg atgaacttgg cattgatctt acagcgattt
    34801 gccgtttaga tacaatggtt acagttgttg atgctaaccg cttcgtacat gacatcaact
    34861 cagaagattt attgatggat cgtgatcaaa gcgttgatga aacagatgaa cgttcgattg
    34921 ctgatttatt aattgaccaa gttgaatttt gtgatgtatt gattattaat aaaattgatt
    34981 taattagtga agaagaactt gcaaagttag aaaaagtgtt aagcgcattg caacctactg
    35041 ctaaaattat taagacaaca aattctgaag tagatttaaa agaagtctta aatacgcagc
    35101 gttttgattt tgaaaaagcg agcgagtcag caggatggat caaagaactt gagtctggtg
    35161 ggcatgcatc gcatacacct gaaacagaag aatatggtat atcatcgttt gtatataaac
    35221 gtcgacttcc tttccatgct aaaaggttca atgattggtt agaaagcatg ccaaataatg
    35281 tcgttcgatc aaaaggtatc atatggctag cacaatacaa tcacgtagca tgtttattat
    35341 ctcaagcagg gtcatcttgc aatattcatc cagttacata ttgggtggct agtatgtctg
    35401 aagcgcaaca aacacaaata ttagcagaac gtcaagatgt cgcagctgaa tgggatccag
    35461 aatatggcga tcgtcataca caatttgtca ttattggtac agaattagat gaagaaaaat
    35521 taacaaaaga actcgacgca tgcttagtca atgcgcaaga aattgatgca gattggcaac
    35581 aatttgaaga tccatatcaa tggcaaatta gaccagcacg ataagttgaa tgaagtataa
    35641 tcatttttaa attgtggctt aattgtttgc aatttatgac aattaataaa aagttaaggt
    35701 gttcttagga tctttttgtt ttcaatctat ttaaagtgtg atagttttga taaagcagaa
    35761 atttgcattt tatccatagg gctaggacat gtatgtgtct tagtcctttt tatgtttgct
    35821 ttgatgaaaa atggcaaaac catcgtacca actgttaatt gaaggtacaa tcattgttta
    35881 acagtcataa aaatgagtga agtaaatgca gctatcaatg tactattaac acttacggtc
    35941 acacgagtgt ttcagtctaa acgtgcaacg caattccgca cgtggccaat atatcttgcg
    36001 ctagatcatg aaaatcatta agatttcgca cgccaaatca tgaatgtctc agacctcgag
    36061 tatcaaacat aaaacacgcc acaaaaatat aacgcgtcag actacaaaga tcacgaatat
    36121 tccgtacgtc ccacgaagaa catcctatac aaaaaaacca agaccattta tttgcaacaa
    36181 actaacaaga ctaacctcac atcaataaat caacacaaag caaagccacc atccctattg
    36241 gcatagtggc ctgagaattt taagtattca attcgcttaa attattttgc gaaaatgtcg
    36301 ataattgctt tgatgatttt aatgatagta cctacaatag ccatcgtttt gtcctcctgt
    36361 atgttgattt aacatagtga tgagttgttg atcgttaatg tttgagatta gttgttacct
    36421 aaaaatttac caagtaaatc tttaaagaat ttgaataatt ttgctacgaa ttccatgtga
    36481 atggccccct tcaaataaga tgttcatatc tatgagattt ttataactta cttaccagtg
    36541 aatttctcaa ttaatccttt aatgaattta atgattcctg caatgatacc catgtgaaag
    36601 acctcctttg tttgttatga aatcttattt accagtgaat tgttcgatta agcttttgat
    36661 aactttaatg atgccagcga tgatacccat taagattacc tcctttgctt atgagttaac
    36721 ttcattgtac atagttatct tgtgcgtaat tgattttttt cctaacttga attgttatga
    36781 tcataactgc gaatttttta ttttaaaagg acgggaaata ctgcctaact gtacaggtgc
    36841 atttacaaaa tctttacaat cattggttta atagaggtta agctgatgaa tttgacatga
    36901 agcagaaatt taattatatt ttatgttata agtttaaaac gaataacacg ttaggtctcg
    36961 tctaggcaaa gcatatttat gaagatgaat tgaacagaca gaagtaacat tttatataca
    37021 tatgtgcatg ggagcacgct taaagagaac actgcaacaa ggtatatcaa cgtaccgtga
    37081 tgcagtgtct agttaaactg aaacctgcaa tagtaaattt tctgccatta tgtacagaat
    37141 ctactattgt aggtttttat ttttatacat aagcaattat gcgagagatt agaaataagg
    37201 aggttatgca gtgttaagtt ttcaattgct attttcactg tttgttattg cgcttatcat
    37261 tgcattgata agtggcttgt tgtttttagc accagttatg ccaatgagat atattaaatt
    37321 acatttatac atactagtca tgccagtatt atttgcagtc attggctttt tcggtattca
    37381 tggtcaacat gtcttaggtc catttaaaat agatcgttta tcttggttat tagctggctt
    37441 tgtaatggcg cttggcttta ttattcaaaa gttttcaatg cgatatttac taggtgatca
    37501 tcattataga cattactttc cattgttcac tgcgattacg tcgtttgcat ctttagcatg
    37561 gatgtctgaa gacttaagac tgatggcact ctgctggggt atgacattat tatgtttaac
    37621 attgctgatg aacgttaatc gtttttggaa agtgccacgt gagtctgcga aattatcaag
    37681 tatgacattt ttatgtggtt ggcttgcatt cgttggagca attgtaacta tttatattgc
    37741 gactggcgag tggcgcgtgc ctcaacatat gtctaattcg acatggtcat tgttgacgaa
    37801 tgtactactt gtattagctg tcatgatacc ggcagcacaa tttccttttc atcgatggtt
    37861 gattgaatct gtaacggcac caacgccagt atcggcaatt atgcatgcag gaattgtgaa
    37921 tgcaggtggt gttattctaa ctcgttttgc gccgatattt gataatggat ttgcgttatc
    37981 attattactt atcctttcta gtatttctgt attgttagga tcgggtatta gcttagttca
    38041 agttgactat aaacgccaat tagtgggctc tacgatgagt caaatgggct ttatgttagt
    38101 tcaatgtgca ttgggtgtat attcagcagc gattattcat ttaatattgc acggtatttt
    38161 taaagcaaca ttatttttac aatcaggttc tatcgtgaag cgattcaata ttccaaaaca
    38221 agcatctgct aaagacgctt atggctggat tgtcatggga cgtgtattag ctattatcgt
    38281 ggcatttcta ttttggatga gtagtgacag aagtgcatat gaagtgttaa gtgcactcat
    38341 tctagcatgg tcattacttg tatcttggaa tcagatggta gcctttagta aagggcgcat
    38401 ggcacgtctt gttggcatga ttttgattgc aattgtgaca tttatctaca tcatcacaca
    38461 taattatttt tacgatgtat tgcgaaatat aacaacacat gcgacaacac cgcctacagt
    38521 gagtgtcatc attagtgttg tcattttaat ctttggtagt ttattaagta tttgggtggc
    38581 gcgtcatcga tactctaagg gttttgcggt attgtacgtg tggttagtta atctaggtga
    38641 agcacgctcg aaagcgatag aaagtcatcc gaattatttg aagaagtatt tataggaggt
    38701 gaaaggtatg acaacacagt taaatatcaa ttcagtcatt gaaaatgcga aacgtgttat
    38761 tacaccatta tcaccaattt cgatttttgc agcacgaaat ccatgggaag gattagaagc
    38821 ggatacgttt gaagatgttg caaaatggtt acgtgatgtt cgagatgtgg atatttttcc
    38881 aaataaagca ttaatagaaa gtgctgtggc acgtggtgaa ttagacgaaa gtgtctttaa
    38941 tcaacttgtt actgatatgt tacttgaaca tcactacaat atcccgcaac actacatcaa
    39001 tctttatatt gataacatta aaacattaaa agacgtacct acatcatata tgaatcattc
    39061 aaatgttgat gttgttgctg atctactatt agaaaaatca aaacgtgata tggctgaatc
    39121 atatcatcac tatgatgtac gtccgatgag tgatgcaata atagatgaac aaggtgagcc
    39181 acttagcgaa caagtgaatc gtcaaatgat taaatggacg aaactttata tcgatcaatt
    39241 tctatcgagt tggacaatgc cgaagcgaga gcaaagtttt taccatgcat ggttgcattt
    39301 agcgcaacat gaccatagtt ttactaaagc acagcgccaa gtgattaaag gcttacccaa
    39361 tgatcctgaa atgacgatag agtcagtatt aactcatttt tcaatagcgc aggaagacta
    39421 ccaagcttgt gttgaaggac atcttttggc gttaccgggt tgggcaggta tgttgtatta
    39481 ccgttcacaa cagcatcact ttgaacaaca tttgttaacg gattatttgg ccattcggtt
    39541 agttgtcgaa caattgctag ttggtgatga gtttaagtca gtcactaaag attgtgaaag
    39601 tagatcggaa aattggttta agcaaactgt tgcatcatgg tgttactaca gtgatatgcc
    39661 tagcgatgta ttactacaac atgacgtcaa tgaaattcaa acgtttattc attttgcagc
    39721 aactatgaat aaaaatgtat ttaaaaattt atggctaatt gcctgggaaa tgacatacga
    39781 atctcagtta aaacaaaaaa ttaaagcagg tcatgagagt gtggcgggcg cattagatgt
    39841 aaaccaagta aatgtcttag aaaatgataa cgctaatcag ccacattcag tattgttaaa
    39901 tgacacacaa gcagttgatg aaaataatag cgagctaaat cagatgggca catcaacgaa
    39961 agcgcaaatt gcattttgta tagatgttcg ttcagaacca tttcgtagac atatcgaagc
    40021 ggcagggccc tttgaaacga ttggtattgc aggtttcttt ggattaccta ttcaaaaaga
    40081 tgccgtagac gaacaattca aacatgattc attacctgtc atggtaccgc cggcatatcg
    40141 cattaaagaa tttgcagacc gctacgatat gaatgtttat cgacaacagc aacagacaat
    40201 gtcatcgatg ttttacacat ttaaattgat gaaaaataat gtcatgccta gtctgttatt
    40261 gcctgaatta agtgggccat ttttaagctt gagtaccatt gtcaattcga ttatgcctag
    40321 aaaaagtcgc gcgtctttac aaaaaataaa acaaaaatgg ttgaaaaagc ctgaaacaaa
    40381 gttaacgatt gatcgtgagt ttgaccgaac atcagactta cctgttggat ttactgagca
    40441 agagcaaatt gatttcgcgt tacaagcgtt gaaattgatg gatttaaccg aagcatttgc
    40501 gccgttcgtt gtgttagcag gtcatgctag tcattctcat aataatccac atcatgcatc
    40561 acttgaatgt ggggcttgtg gtggcgcatc aagcggtttt aatgctaagt tattagcgat
    40621 gatatgtaat cgtccaaatg tcagacaagg attaaaacaa gcaggcgtag taattccgga
    40681 gacaactgtt tttgcggcag cagaacatca tacgtctact gatacgttgg catgggtata
    40741 tgtgccagac acattatcag ctttagctct agatgcatat gaatcattga atgacgcgat
    40801 gccgatgatt tctgaacacg cgaatcgcga acgtttggac aaactgccaa cgattggtcg
    40861 tgtgaatcat ccagtggaag aagcgcagcg gtttgcgagt gattggagtg aggtacgtcc
    40921 agaatggggc ttggctaaaa atgcatcatt tataattgga cgacgccaat taacaaaagg
    40981 cattgattta gaagggcgga catttttaca caattatgat tggcgtaaag ataaagatgg
    41041 cacattgtta aataccatca tttctggtcc ggcacttgtg gcacaatgga ttaatttaca
    41101 atattatgcg tcgacagttg cgccgcattt ttacggaagt gggaataaag cgacacaaac
    41161 cgtcacgtca ggtgttggtg tcatgcaagg taatgcgagt gatctgatgt atggcttatc
    41221 atggcaatct gttatggctg ctgatcgaac gatgtatcat tcgccaattc gtttgcttgt
    41281 cgttgttcag gcacccgact atgttgtagc aagactactc gcgaataatg accatttcgc
    41341 taggaaggtg tctaatcatt ggctgcgttt aatgagcgtt aatgaggaag ggcgttttaa
    41401 aagttggatt taacgatgat atgttgcgat gctaagtaac taatatatca tcatatctac
    41461 aatgttctag cttcttaaaa tatactaaaa atgataaact taatgtaata gttgatgtcg
    41521 tgataacgat acaaagatga agtaatcaat tttaatatta ttggagttag tgatatgaaa
    41581 agaacgaaag gtgaaatcga agctgaaatc agtaaagcca ttacgcaatg ggaaaaagat
    41641 ttccttggca gaggttcctt gtcagttaaa tcagacattt taagagatat ggtgattatt
    41701 agtttacaag gtatcttaac gccagcagaa tatcgtgtgt gtagtacgaa tgaaggatta
    41761 ttaaatatta aacgaacacg ttctgaatta gttgaatccg gtgagcaaga tttgaatgat
    41821 atcattctta aaattacagg tatcaaagtg atgagcttcc acagtgattt aagtacagtt
    41881 acaggtgaac gtattatcgt attcaaactt gaggataatt tggaaaagca tatttaagaa
    41941 ggttaggtat gcttctgctg gcttattaaa gctatagaag tatgcttggt taaacagcgc
    42001 aacgccatat atttgggtgt gctgtttttc tattatatga tgtgtttatt acgtggatga
    42061 atgcgtgggt ctgaatatag cccgtgaaag gcgtatgtca taaaatttgc gaatggtgac
    42121 aagtcaacgc aagcatattt gttgcgagac atgcccacta tccttttaca taaagagtat
    42181 atgtgtgacg tatgcatata atcgataaag tatacctaaa aaattaggta taatgaccat
    42241 tgttgcaata agtttttcgg ccttgaaacc gataacgcat agtataatag gaataaaata
    42301 taatacaaat atccagtaaa tcaaatttga aaacgatgga tgaatagggg taaagaatct
    42361 aactaatgta atgattaacg ctatatagac aaaaataact ctattgatac gccttacccc
    42421 ctctgtataa taactataaa tcgtactaaa ttgaaaatag caaaatattg ttatttcaat
    42481 tatacaatgt tttatttgca atatacataa caatatgaac tttataattt tgatattgtc
    42541 ggtaaagtga aatttgtggc acattgatat tatggataac atttgtaaaa tgaaaatgat
    42601 gatacgagga gattgtaaga tgatagataa aaaattaaca tcaccgaaaa tgacagtgcc
    42661 tttattttta atcgcgctga ttgtatttat aggtatgttt tacagtgtag tgacaaatca
    42721 agaatggctt aaaaatatag atatgggatc attaacatgg tttacagatt atttcggtga
    42781 gccacaacgt cagtatgtta acaatttatt taattactat atgacgttta gtgcggaaat
    42841 tggagatgtc aaaggtgtcg tgttgatttc cattatcatc acaatcatac tgtttattaa
    42901 acagaggcat ttagcggttt ggtttgtgac atatttggtt tcaggcgtca tcatgaacaa
    42961 attaattaaa gatactgttt tacgtccaag accatataat catttagccg ttgatacagg
    43021 cttttcattt ccaagtggac attccaacgc cagcacatta ttatatttcg ccttaatgat
    43081 cataattatt tcacttgctg ctaagacaat aacaaaagtg ttgagtgcgc tagttatggg
    43141 aatattatgg cttagcatat tattttgtcg cctttatttt catgcgcatt acttttcaga
    43201 tgtcattggc ggcacgtcac tagcaatcat ttgggtagcg ttattcttaa tggtataccc
    43261 atactttatt aatcatcgac gacaacgcgt ttagcaaaca tctttagaca tagtggaggt
    43321 atatagaaaa atgagaatta aaacaccgag tccatcgtat ttaaaaggca caaatggaca
    43381 tgcgatatta ttattacatt catttacagg tacaaatcgg gatgtgaagc atcttgcagc
    43441 tgagttaaat gcacaaggat ttagttgtta tgcaccgaat tatccaggtc atggcttact
    43501 gttgaaagat ttcatgacat ataatgtaga tgattggcgg gaagaagttg agaaagctta
    43561 ccaattttta gtcaatgaag gttatgaatc tatcagtgca acgggtgtgt ctttaggtgg
    43621 attaatgaca ttaaaattgg cgcaacacta tcctttgaaa cgtatcgctg tcatgtcagc
    43681 accaaaggaa aagagtgacg atggcttaat agaacattta gtttattata gtcaacgcat
    43741 gtcgaatatt ttaaatttag atcagcaagc atcgagtgcg caattagcag caattgatga
    43801 ttatgaaggt gaaattacga agtttcaaca ttttattgat gatatcatga caaatttaaa
    43861 tgttattaaa atgccagcta atatattatt tggtggtaaa gatgcgccat cctatgaaac
    43921 aagtgcacat tttatttatg aacatttagg atcagtagac aaagaattaa atggtctgaa
    43981 ggattcgcat catttaatga cgcatggaga aggcagagat attttagaag aaaatgttat
    44041 tcgctttttc aatgctttaa cataattgaa gattttaaaa attaacactt gagtgacgat
    44101 gttattatat ttgtcatttg agtgtttttt gtggcgtgat agtataggga acttagctaa
    44161 agttaatttg tagtgtgatg tcgtggaaat tttatgggca ttgtacctga agttgttatg
    44221 tggcgagatg ttggggatat agatggtgtt gtatgtggcg agatattggc gtacgtatac
    44281 agcgttgaac cagaaaattt aatgtagcgt aatgacaaca cattacaaga gttgattata
    44341 ttatgataaa tccaggtgct accgtactaa tgaaacaaat ttgatgcagg tgtattgcat
    44401 gttatttaca tacatgttag agtgttactt aaacacgtag acgctttaac gctttaaagg
    44461 agatgcgaat gatgaaaaga caacaatcac aatggaagtc atcaactgga tttattttag
    44521 ctagtgcggg ttctgcaatc ggtcttggtg ccatgtggaa attcccatat atggcaggga
    44581 tttatggcgg cggtgccttt ctagctatgt tcttaatatt caccattttt gttgggttgc
    44641 cattactcat tatggaattc actgttggga aaatgggacg gacatataca acacaaatat
    44701 atagtaaatt aactggtaaa aaatggctca atatcattgg ctggaacggt aatttggcag
    44761 tgtttatttt atttggcttc tatagtgtta tcggtggttg gattgtcatt tacatcggac
    44821 aagtattatg gcaattagtt atatttcaac gcatcaatca tctccaagaa atgaattttg
    44881 aagcggtaat atcaaatcct tggttaactg ttctagggca aggtatattc atattcgcta
    44941 cgatgattat tgtcatgtta ggtgttgaaa aaggattaga aaaggcatcg aaagttatga
    45001 tgccattgct gtttgtcttt ttaatcatca ttgtgattaa gtctttaaca ttagatggtg
    45061 ccttagaagg tgtgaaattt attttacaac caagagtatc agagattact gctgacggta
    45121 tcttgtttgc gctaggccaa tcattcttta cgttatcatt aggaactaca ggtatgatta
    45181 cttatgcgag ttatgcctct aaagacatga cgattaagtc atcagctatt tctatcgttg
    45241 ttatgaatat ctttgtatct gtattggcag gtctagctat atttccggcg ttacatagtt
    45301 ttggctatga accacaagaa gggcctggat tattatttaa agtactgcca atggtcttta
    45361 gtcaaatgca tctaggcaca ttattctatt tgggattctt agtgctgttc ttatttgcgg
    45421 ctttaacgtc atctatttct ttattagaat taaatgtttc taacttcacg aagaatgaca
    45481 atacaaaacg taaaaaagtc gcagtgatcg gtagtatttt agtatttatc attagtattc
    45541 cagcaacctt atcttttggt atcttaaaag atgtaagatt cggtgcggga acgatttttg
    45601 ataatatgga tttcatcgtt tcgaatgtat tgatgccatt aggcgcatta ggtactacgc
    45661 ttgtcgtagg acaattatta gataaaaaat tattacaaca atattttggt aaagatcgat
    45721 ttagattatt cagtggttgg tattacttaa ttaagtatgc gatgcctgtc gttattatct
    45781 tagtctttat cgtgcaatta tttagttaat atatagaagc atctgacaca caagtatttg
    45841 tgttgatcag gtgttttttt gtttggaatt gaaaagttag tactggttct gaattaatcg
    45901 aaacttagat aattgcaaaa taacaaaatg tcgtttataa ttcttatctg aaaagtaaga
    45961 attaaaattg agatatgaag aaaggtttca ttcatttgat cggcatgtca gatgagggtg
    46021 catctatgat tacttatgat ttaattggca atacaccatt agtactgtta gaacattata
    46081 gtgatgataa agttaaaatt tatgccaagc ttgaacaatg gaatcctgga ggcagtgtta
    46141 aagacagact cgggaaatat ttagtagaga aggcaattca agaagggcgt gtgcgtgcag
    46201 gtcaaactat tgttgaagcg actgctggta atacaggcat agggttagct attgcagcga
    46261 atagacatca tttgaaatgt aagatctttg cgccgtatgg tttttcagaa gaaaagatta
    46321 atattatgat agcgcttggt gcagatgttt caaggacgag tcagtctgaa ggtatgcatg
    46381 gggcacaatt agctgcacgt tcctatgctg aaaaatatgg tgccgtttat atgaatcaat
    46441 ttgaatccga acataatccg gatacatatt ttcatacatt gggacccgaa ttgacttcag
    46501 cattacagca aattgattat tttgtggctg gtattggctc tggcggtaca tttacaggta
    46561 ccgcacgtta tttaaagcaa catcacgtgc aatgttatgc cgttgagcca gaagggtccg
    46621 tgttaaatgg agggccagct catgcacatg acactgaagg tatcggttct gagaaatggc
    46681 cgatattttt agagagacgt cttgtagatg ggatatttac gattaaagat caagatgcct
    46741 ttcgaaatgt caaaagtttg gctataaatg aagggttgtt agtaggcagt tcttcaggtg
    46801 cagcattaca aggtgcattg aatttaaaag cgcaattatc tgaaggtacg attgttgtcg
    46861 tatttccaga tggtagcgat cgatatatgt ctaagcaaat atttaattat gaggagaatg
    46921 attatgaata agaaaactaa attaattcac ggtggacaca caacggacga ctatacaggt
    46981 gcagttacta caccaattta tcaaacaagt acatatttac aagatgatat tggtgattta
    47041 cgtcaaggat atgaatattc tcgtactgcg aatccgacaa gaagttctgt agaaagcgtt
    47101 attgcggcat tagaaaatgg caaacatggc tttgcattta gttcaggtgt tgcagcaatc
    47161 agtgcagttg ttatgctgtt ggacaaaggt gatcatatta ttttaaattc agatgtatac
    47221 ggcggtactt atcgcgcatt gacaaaagta tttacacgat ttggcattga agtggatttt
    47281 gtagatacaa cgcatacaga ttcaattgta caagcgatac gcccaacaac aaagatgttg
    47341 tttattgaaa caccttctaa tccattatta cgtgttactg acattaaaaa gtctgctgaa
    47401 attgcgaaag aacacggttt gatttcagtc gttgataaca catttatgac accttattat
    47461 cagaatccat tagatttagg tatcgatatt gttttacatt ctgcaacgaa atatttaggt
    47521 ggacatagtg atgtcgttgc tggtttagtt gcaacatcgg atgacaagct tgcagaacgt
    47581 ttagcattta tttcaaattc aacaggtggc attttaggac ctcaagatag ctatttactt
    47641 gtgaggggta ttaaaacatt aggtttacgt atggaacaaa ttaatcgcag tgttattgaa
    47701 attattaaaa tgttacaagc acatccagct gtgcaacaag tgttccatcc aagtattgaa
    47761 agtcatttaa atcatgatgt ccatatggct caagctgatg gccatacagg tgtgattgca
    47821 tttgaagtga aagatacaga aagtgccaaa caattgatta aagcaacatc gtattacaca
    47881 ttagctgaaa gtttaggtgc agtggaaagt ttaatttcag tacctgcact gatgacacat
    47941 gcatccattc cagcagatat tcgagctaaa gaaggtatta cagacggact tgtaagaatt
    48001 tctgtaggta ttgaagatac tgaagattta gtggatgatt taaaacaagc actagatacg
    48061 ttataaataa tagcagcact ggcatatatt ttgagttcaa cgtttgttgt tcttgaatat
    48121 gctagtgctt ttttgtgcga tgttaatatt tcgtaattgc gttgtggagg attgctggtc
    48181 atttttattc atttaattcg ataaatgtca tagtagcctc acaattcatc attgtcacat
    48241 gaattgctta ttttttaatt ttttagaaaa ttcggcaaat tgtattgacg atatatgcaa
    48301 ttttacatat aatgctctta ttcctagtgg attaataaga atttgtagga ggggcgatga
    48361 tgattgagtt tcgacaggta agtaagacct ttaataaaaa gaagcaaaaa atacatgctt
    48421 taaaagatgt atcatttaag gtcaatcgca atgatatttt tggtgtgatt ggatacagtg
    48481 gtgctggaaa aagtacgttg gtaagactcg tgaatcatct tgaagctgcc tcaagtggtc
    48541 aagtgcttgt agatggacat gatattacga attatagtga aaaaggcatg cgagaaataa
    48601 aaaaagatat cggtatgata tttcagcatt tcaatttatt aaattcagct accgtattta
    48661 aaaatgtagc aatgccactc attttaagta agaaaagcaa aacagaaatt aagcaacgag
    48721 taacggaaat gcttgaattt gtaggattga gtgataaaaa agaccaattt cctgatgaat
    48781 tatctggtgg gcagaagcaa agggtggcta ttgcaagagc gcttgttact aatccgaaaa
    48841 tactcctatg cgatgaagca acaagcgcat tggatccagc aacgactgct tcgatattga
    48901 cgttattaaa gaatgtcaat caaacctttg gcattacaat tatgatgatt acacatgaaa
    48961 tgcgcgttat taaagacatt tgtaatcgtg ttgctgtaat ggaaaagggg caagtggttg
    49021 aaacaggaac tgttaaagag gtgtttagtc atcctaaaac gacgattgct caaaattttg
    49081 tgtctacagt tatacagact gagccaagta catcattgat tcgtcgattg aatgacgaac
    49141 aagttggcga ttttaaagat tataaaatct tcgtcgagga aactcaggtg acacaaccga
    49201 ttataaatga cttgattcaa atttgtggca gagaggttaa aattttattt tcatctatgt
    49261 cagaaataca aggtaacacc gtatgttata tgtggcttcg atttaatatg gatcaacaat
    49321 ttgatgacac ggcaataaat caatatttca aagagaaaaa tattcaattt gaggaggtgc
    49381 attaacatat gtttggttct gatttagaca gtgcacagtt attacaagca ttgtacgaaa
    49441 cgctatatat ggtatctatt gctttatttt taggagcagt gattggtatt ccattaggtg
    49501 tcttattggt aattactcga aaacaaggca tatggcccaa tatagtgata catcaagttt
    49561 taaatccttt aatcaatatt ttaaggtcac taccatttat tattttgtta attgcgattg
    49621 tgccattcac aaaattagta gtaggtactt caattggtac gactgctgcc atcgtgcctt
    49681 taacagtata tgtggcacct tacattgcaa gacttgttga aaactcatta ttggaagtag
    49741 acgaggggat tattgaagcg gcgaaagcga tgggcgcttc accactacaa atcattagat
    49801 attttttaat ccctgaagcg ttaggttcat tagtattagc aattaccact gcgattattg
    49861 gacttattgg aagtacggcg atggcaggag ctgttggcgg tggtggtata ggagacttag
    49921 ctttagtgta tggttatcaa agatttgata cgacggtcat tattattacc gttattgtat
    49981 tagtcattat tgtccaagtg attcaaacgc tagggaatgt tctagctaga ttcatacgta
    50041 gacattaatg gtatatagtg aagattttga aaggaattga tagaatgaaa agattgattg
    50101 ggttagttat cgtagcactt gtattattag cagcgtgtgg tagtaacaat gataaaaaag
    50161 taacaattgg tgtcgcatca aatgatacta aggcttggga gaaggttaaa gaattagcta
    50221 aaaaagatga tattgatgtg gagattaagc acttttccga ttacaattta ccgaataaag
    50281 cattaaacga tggtgatatt gatatgaatg cattccaaca ttttgcattt ttagatcagt
    50341 ataagaaggc acataaagga acaaagattt cagcattaag tacaacagtt ttagcaccgt
    50401 tgggcattta ctcagataaa attaaagatg tcaaaaaggt taaagatggt gctaaagttg
    50461 tcattccaaa tgatgtatca aaccaagcac gtgcacttaa actattagaa gcagctggtt
    50521 taataaaact gaaaaaagat ttcggtttgg caggcacggt gaaagatata acgtcaaatc
    50581 caaaacattt aaaaattact gcagtagatg cacaacaaac tgcgcgtgct ttatctgatg
    50641 tcgatattgc agttattaat aatggtgtag caactaaagc gggtaaagat cctaaaaatg
    50701 atccgatatt tttagaaaaa tcaaattcag atgctgtaaa gccatatatt aatattgttg
    50761 cagttaatga caaagacttg gataacaaaa catatgctaa aatcgtagaa ttgtatcatt
    50821 caaaagaagc tcaaaaagcg ttgcaggaag atgtcaaaga tggagagaaa cctgttaatt
    50881 tatctaaaga tgagattaag gcaatagaaa cgtcattagc aaaataaata atattgcgtc
    50941 ctacaagcaa agttcatgct tatgtttgta gggcgttatt gtttgacaat aaaattattt
    51001 ccaatagaga aagggattgt aatcatttta tagtgaaata ttatgaaatt gtaataattt
    51061 agatattgta aaatctaata agttgtaata attttaaggg gtaattataa aatttgatga
    51121 tacagtatat gatttttttg taatcataat gtcatcaaac atcaacctat tatacataat
    51181 taaatcgtat aatgatgtag tattcataaa ttcggataaa aagaatgtta ggaaagttaa
    51241 gcaagaggag gattttaaag tgcaaaaaaa agtaattgca gctattattg ggacaagcgc
    51301 gattagcgct gttgcggcaa ctcaagcaaa tgcggctaca actcacacag taaaaccggg
    51361 tgaatcagtg tgggcaattt caaataagta tgggatttcg attgctaaat taaagtcatt
    51421 aaacaattta acatctaatc taattttccc aaaccaagta ctaaaagtat ctggctcaag
    51481 taattctacg agcaatagta gccgtccatc aacaaattca ggtggcggat catactatac
    51541 agtacaagca ggtgactcat tgtcattaat cgcatctaaa tatggtacaa cttaccaaaa
    51601 cattatgcga cttaatggtt taaataattt ctttatttat ccaggtcaaa aattaaaagt
    51661 atcaggtact gcaagctcaa gtaattctgc gagcaatagt agccgtccat caacgaattc
    51721 aagcggtgga tcatactaca cagtacaagc aggtgactca ttgtcattaa tcgcttcaaa
    51781 atatggtaca acttaccaaa aaattatgag cttaaatggc ttaaataatt tctttatata
    51841 tccgggtcaa aaattaaaag taactggtaa tgcaacatct tcaaactcag catctgcaac
    51901 aactacgaat agaggttaca atacaccagt attcagtcat caaaacttat atacatgggg
    51961 tcaatgtaca tatcatgtat ttaatcgtcg tgctgaaatt ggtaaaggta ttagtactta
    52021 ttggtggaat gctaataact gggataacgc agcggcagca gatggttaca ctatcgacaa
    52081 tagacctact gtaggttcta tcgctcaaac agatgtaggt tactatggtc atgttatgtt
    52141 tgtagaacgt gtaaataacg atggtagtat tttagtttca gaaatgaact attcagctgc
    52201 accaggtatt ttaacttaca gaacggtacc agcttaccaa gtaaataatt atagatatat
    52261 tcactaaagt cttacgtata taaatatata atgaattcct attacatttc acaagctgaa
    52321 aagttggatt gaatcctaaa ctttatggcg gggctatcaa agtcgtgatt gttgtaatag
    52381 gaatttttgt atatgaaaaa ggattggtcg aatgaacttc atgttctatg ttcgaccaat
    52441 ccttttctga attagtattc atgctttact ttgcgaatgc ttgtaaataa tctagcaccg
    52501 tttgttatta aagtaacaac tgccactgct tttttgaact tacgtggtga cttaattgaa
    52561 atgtaaaagt ctaacacggt tcctacagtg cttaaaccta atgaaagata tactaatttt
    52621 ttatttttag catgatattt atagccattg tagccgtcga ctatgaaacc tgcgacattt
    52681 agtaaacttg ataaacgttg tgatttggaa cgttttgcca taatattaat tccccctagt
    52741 atcttctgtt tatatgaaaa gttgggtgcg ctgaattgct aacgttttgc gctataacta
    52801 ctcatatatg ataacataat tgtacagtat aatttgaaaa attgatttca caaagttggg
    52861 gtgtcaaaga tgattaaatg tgtctgttta gttgaagaaa cagctgataa aatattgctt
    52921 gttcaagtaa ggaatcgcga aaagtattat ttcccaggtg gtaaaataga agaaggggaa
    52981 tcacaagtac aagcgctgtt aagagaagta aaagaagaat taaatttaac attaacaatg
    53041 gatgaaattg aatatatcgg gacaattgta ggtcctgcat atccacaaca ggatatgtta
    53101 actgagttaa atggatttcg cgcattaacc aaaatcgatt gggaaaacgt aactatcaat
    53161 aatgaaatta cggatatacg ctggatggat aaagataatg atgcgttgat tgcgcctgct
    53221 gtcaaagttt ggattgaaac gtatggtggt aaacatgaca aataatgaca ccatcatgtt
    53281 acgacattat gtcccacaag attattcgat gttagaagct tttcaattaa gtgaaagtga
    53341 tttgaagttt gttaaaacgc cagaggaaaa tattacagct gcaatgtctg ataatgaaag
    53401 gtatcccatc gttgtaatgg atggcaggca atgtgtggcc ttttttacat tacatcgtgg
    53461 aaaaggggtc gcaccattta gcgataacca agatgcagta tttttcaggt catttagtgt
    53521 tgatcaacgt tatcgtaata gaggaatagg taaagtggta atggaaaaat tggcgtcatt
    53581 tatcacttca acatttcagg gtattaatga gattgtgtta acggttaata ctgacaatcc
    53641 acatgccatg gcactttatc gccaacaagg atatcaatat atgggagata gtatgttcgt
    53701 cggaagacct gttcatatta tggcgttaac tataaaataa attaaattta aaagcatctt
    53761 tactcatcgt cgatcacaac aattaatgat gaataaaggt gctttttgtt atagatcacc
    53821 ggacaattta ctatagtaaa aagcgaccta gtgaacaatt gacatatatc cacaggtcgc
    53881 ttaacttaaa ttatattgct agttgcgatt aattgataga ctcatcattt ttgcgctgtc
    53941 gagatggtct ttttattaaa aatgccgtaa tccaagccgt aatcggaata ctgattgcaa
    54001 cggcaatacc gcctaaaata atagaaataa attcttgagc aaatattttc gagtttataa
    54061 tatgaccaaa tgaatattta agtttgaaaa accaaataaa taaagcaagt tggccaccaa
    54121 aaaaggcaag gtaaatcgtg ttcgcagatg tcgctaaaat ttctctacca acacgcatgc
    54181 cagattggaa taattcgtat tgcgtaagtg ttggattcac ttgatgcaat tcataaatgg
    54241 gtgaactaat ggtaatcgtt aaatctatca cagctgcaat aacagcaaga ataatagtga
    54301 acaccataaa ttgaaccata tcaatgccaa tattcattga atacacatat gtttcatctt
    54361 gttgttcggt tgaaaagcct tgtagatgac cgaagtagac cgataaataa atgagtgtaa
    54421 tcaacaatat tgttgtaacg atagtgctga taaatgcagc ttgtgtttta acattgtaac
    54481 tattgagtac gaataaatta caagcgccaa taataatgca gaaaaagaat gtgacgacat
    54541 aaatcggtac gccaaaaata atcaacacaa tactaataat taaaatagcg aaatttaaaa
    54601 atagggttaa ataagagatg aatccctttt tacctccgaa aattatcatc agaaagagga
    54661 gcaataacgc caatataaat acagcattca ttgtttcgcc ctccttaatg tttcaaatat
    54721 ttccataaac aatattgtga taggaattgt aagtacgata cctataccgc ctgttagtgc
    54781 gcgcgcaatt tctaacgacc aattcatcga aatagtataa gtcacagtat ttgcattttt
    54841 taaaaagatt aaaaacatag gtagtgcacc agataaatat gagaataata agatgttagt
    54901 cattgttccc ataatatctt ggccgatgta tcgcccagca agcgcccatc tcctcattga
    54961 aatgtgtggc gtacgctgta aaatttcatg cataccacta gcaattgtaa ttgcaacatc
    55021 cataatagcg ccaagtgaac ctattaacac tgaggctagg aagatatctt tcggtggtaa
    55081 tgataaaaag ttcatcgttt catatttaat gcctttacca tctgtcatat atatgattaa
    55141 ttctgttaaa cctatactca aaaaagttcc gataattgta ctggctatgg taatgagtgt
    55201 acgcatatgc cagcctgtaa cgagcaataa agtgagtact gttgaacaga tcatggcaat
    55261 ggtcatgagt aagaataaat taatattgct atgttgaata tgaatgtaaa ttgcgattaa
    55321 tatggcaata gaattcaaga ttaacgataa aatcgattgc agtccgactt tgcgaccaac
    55381 caataataca gttaataaga acaaaccagt gatgataacc gttaaggtat cacgcttctt
    55441 ttctataata taagcatcac tcggcttgtt agaaatatgt aataatactt tttcgtgtgt
    55501 gcgaaatgcc tcagaatctg cttgtgattt gacgtactga tgattaatcg tcgttgtttc
    55561 tccagcaaat tgaccattta atattttgac ttttaattga tttttatatt taatatcacg
    55621 attattttgt gcatcttttg taggtgtcga agaaacatgt ttgacatcta taatttgacc
    55681 aattggtttg ttgtaaaagt tctcattatt gaatgtaaat aaaatagcac caatgaatgc
    55741 gatgcagaac aaacctaaaa ttatattaaa tggctttgta aataaatttc tatatttcaa
    55801 aaacaaaacc ccaattctat gaatgaatta atatggtgat tatacgccct taatttttta
    55861 ttttcaaaga tattactgct aagtgtaaaa cgaaaatcat cattgatagc atcgaattac
    55921 ttaatggaat gtagacgttt tagtcattaa ttgctgaata agtgttaata atatgccaat
    55981 atcactcttt gtataaggct cctttgtaat agcacatatc gttcttttta attcagtatg
    56041 atctaatttt atatctatcc atgatttaga ttctggtaaa tgtatatttt gtgatgaaat
    56101 gatgtaacct tctttttgac gaaggagata ctgcgcaagt ggttggctac tgattgtgta
    56161 tacatctgat ttagtaatct tgcgcaattg tttttttaca gtttcggcaa atggtgccaa
    56221 gcaataaata tgactatgct caaactgaat taatggtggg tgtgtcgcca tcgtaattgg
    56281 atcgtctgaa ggcgcatata aatgatagtg ctcttcgaat aaaggtagca tatgtaattg
    56341 tttgtgttta cgtatttctg gtgtaagttc cgtgaaacca atgtctatat tcccatttaa
    56401 tacgctattt ataattgtgt catgttctaa taaattaggg atgacatgtg tatcattttg
    56461 taaatgaaac gtttggataa gtggtagtaa catgtgggat acgtcactct catcatagcc
    56521 aatgtagata cttttatttt tagttaatcc atggctttga aattgttcaa tcgtgctatc
    56581 taaatgttca ataatacgca gagcttcatt aaataataat tttccttcag atgtgagcgt
    56641 aatattgcgt ccttgctttt taaataaaga cacattaagt tcttgttcta ataatgtaat
    56701 ttgacggctt atcgctgatt gagcaatgtt tagttcaagt gctgtttcgg agatatgttc
    56761 tcttttagcg acctcgataa aatatcttaa ttgtttaatt tccatagcga tataggcacc
    56821 tccaaaaatg agtgttttgt aactattata gcaatattat tgataaatgt tctatttttt
    56881 agatgaatat cttctatttt atatattgaa cagataaatt ttttagatta tagtaattat
    56941 cattaataac taatatcaga atattctaaa aaaggggtgt gcatcatgca caatgagaaa
    57001 ttaattaaag gcttatatga ctatcgtgag gaacatgatg cgtgtggtat tggtttttat
    57061 gcgaatatgg ataataaaag gtctcacgac atcattgata aatcgcttga aatgttgcga
    57121 cgcttagatc ataggggcgg ggtcggcgca gatggcatca ctggtgatgg cgcaggtatt
    57181 atgactgaaa taccttttgc atttttcaaa caacatgtaa cggactttga tatcccaggt
    57241 gaaggtgaat atgccgtggg gttatttttt tccaaagaac gcgttttagg ttctgaacat
    57301 gaagcagttt ttaaaaaata ttttgaaggc gaagggttat caattcttgg ttatcgtaat
    57361 gtaccagtta ataaagatgc cattgctaaa catgtagcag atacgatgcc agtcattcaa
    57421 caagtgttta ttgatattag ggacattgaa gatgttgaaa agcatttgtt tttagcgaga
    57481 aaacaattag agttttattc gactcagtgc gatttagaat tgtattttac gagcttatca
    57541 cgcaaaacaa ttgtatataa aggttggtta cgatcagacc aaattaaaaa actctataca
    57601 gatttatcgg atgatttata tcaatcaaag ctagagttag tgcattcgag atttagtacg
    57661 aatacattcc caagttggaa aagggcacat cctaaccgta tgttaatgca taatggtgag
    57721 attaacacga ttaaaggtaa tgtaaactgg atgcgagcac gccaacataa attaatcgaa
    57781 acattatttg gcgaggatca acataaagtg tttcaaattg tcgatgagga tggtagtgac
    57841 tctgctattg tagataatgc gctagagttc ttatcgttag ccatggagcc agaaaaggca
    57901 gcgatgttac tcatacctga accttggtta tataatgaag cgaatgatgc aaatgtacgt
    57961 gcgttttatg aattttatag ttatttaatg gaaccgtggg atggtcctac aatgatttcg
    58021 ttctgtaacg gtgacaaact tggcgcgctt acagatagaa atggattacg tccaggtcgt
    58081 tatacgatta ctaaagataa ctttattgtc ttttcatctg aagtgggtgt tgtggacgta
    58141 cctgaaagta atgttgcttt taaaggtcaa ttgaatcctg gaaagttatt gcttgttgat
    58201 tttaaacaga ataaagtcat tgaaaataat gatttaaaag gtgcgattgc tggagaatta
    58261 ccatataaag cgtggattga taaccataaa gttgactttg attttgaaaa tatacaatat
    58321 caagattcgc aatggaaaga tgagacgtta tttaaattac aacgtcagtt tgcatacacg
    58381 aaagaagaga ttcataagta tattcaggaa cttgtagaag gtaagaagga tcctatcggt
    58441 gcaatgggat atgatgcgcc aattgcagtg ttgaacgagc gaccagaatc actatttaat
    58501 tactttaaac agctgtttgc acaagttacg aatccaccaa ttgatgcgta tcgtgaaaaa
    58561 atcgtaacga gtgaactttc ttatttaggt ggcgaaggta acttactagc acctgatgaa
    58621 acggttttag atcgtattca attgaaaagg ccggtattga atgaatcaca cttagcagcg
    58681 attgatcagg aacattttaa attaacttat ttatcaacgg tatatgaagg ggacttggaa
    58741 gatgcgttag aagcattagg ccgagaagca gtgaatgctg taaagcaagg cgctcaaatt
    58801 ctagtgttag atgacagtgg attagttgat agcaatggct ttgcaatgcc gatgttactc
    58861 gcaataagtc atgtgcatca attacttatt aaagcagatt tacgtatgtc tacaagttta
    58921 gtcgctaaat ctggtgagac acgagaagtg catcatgttg cttgtttact cgcatatggc
    58981 gcgaatgcaa ttgtgccata cctagcgcaa cgtacagttg aacaactgac attgacagaa
    59041 gggttacaag gcaccgttgt cgataatgtt aagacatata cggatgtatt gtcggaaggt
    59101 gtcattaaag taatggctaa gatgggaatt tcgacagtgc aaagttatca aggggcacaa
    59161 atatttgaag cgattggctt gtctcatgat gtgattgatc gttattttac tgggacacag
    59221 tctaagttat ctggtatttc gattgatcaa attgatgctg aaaataaagc acgtcaacaa
    59281 agtgatgata attatcttgc atcaggtagt acattccaat ggagacaaca aggtcaacat
    59341 catgctttta atccggaatc tattttctta ttgcagcacg catgtaaaga aaatgactat
    59401 gcgcaattta aagcatactc tgaagcggtg aacaaaaata gaacagatca cattagacat
    59461 ttacttgaat ttaaagcatg tacaccgatt gacatcgacc aagttgaacc ggtaagtgac
    59521 attgtcaaac gctttaatac aggggcgatg agttatggat cgatttcagc ggaagcacat
    59581 gaaacgttag cacaagccat gaaccaatta ggtggaaaga gtaatagtgg tgaaggtggc
    59641 gaagatgcaa aacgttatga agtacaagtt gatggaagca acaaagtaag tgcgattaaa
    59701 caagttgctt ctgggcggtt tggtgtaact agtgattatt tacaacatgc caaagaaatt
    59761 caaattaaag ttgcgcaagg tgcaaagcct ggtgaaggtg gtcaattacc tggtactaag
    59821 gtatatccgt ggattgcgaa gacaagaggg tcaacgccag gtatcggtct gatttcacca
    59881 ccgccacatc atgatattta ttcaatagaa gatttagcgc aactgataca tgatttgaaa
    59941 aatgcgaata aagatgcaga tatcgcggta aaattagttt cgaaaacagg tgttggtacc
    60001 attgcatctg gggtggcaaa agcatttgca gataaaattg tcatcagtgg ttacgatggt
    60061 ggtacagggg cttcacctaa aacgagtatt cagcatgccg gtgttccttg ggagattggt
    60121 ttagcagaaa cacatcaaac attaaaacta aatgacttaa gaagtcgtgt taagttagaa
    60181 acagacggta agttattaac tggtaaagat gtagcgtacg catgtgcgct tggagcggaa
    60241 gaatttggat ttgcaactgc accattagtg gtgttgggct gtataatgat gcgtgtatgc
    60301 cataaagata catgtccagt aggagttgca actcaaaaca aagatttacg tgctttatat
    60361 agaggtaaag cacatcatgt tgttaatttt atgcatttta ttgcacaaga attaagagaa
    60421 attttagcat ctttaggttt gaaacgtgta gaagacttag ttggaagaac tgatttatta
    60481 caacgatcat caacattaaa agcgaatagc aaagcggcta gtattgatgt tgaaaaactg
    60541 ttatgtcctt tcgatgggcc aaacacaaaa gaaattcaac aaaatcataa tcttgagcat
    60601 ggatttgatt taacaaattt atatgaagta acgaagccat atattactga agggcgtcgc
    60661 tatacaggta gctttacagt aaataatgaa caacgtgatg taggagttat tacaggtagt
    60721 gagatttcga aacaatatgg agaagcagga cttcctgaaa atacaattaa tgtttatacg
    60781 aatggtcatg ctggtcaaag tcttgcagca tacgcaccga aaggcttaat gattcatcat
    60841 actggagatg cgaatgacta tgttggtaaa ggattatctg gtggtacggt cattgtcaaa
    60901 gcaccttttg aagaacgaca aaatgaaatt attgctggta acgtctcatt ctatggtgcg
    60961 acaggtggta aggcatttat taacggtagt gcaggagaaa gattctgtat tagaaatagt
    61021 ggtgtagatg ttgtcgttga aggtatcggc gaccatggat tagagtacat gactggtgga
    61081 catgtcatta atttaggtga tgtaggtaag aacttcggtc aaggtatgag tggtggtatt
    61141 gcttacgtta tcccgtctga tgtagaagct tttgttgaaa ataatcaact agatacgctt
    61201 tcgtttacaa agattaaaca ccaagaagaa aaagcattca ttaagcaaat gctggaagaa
    61261 catgtgtcac acacgaatag tacgagagcg attcatgtgt taaaacattt tgatcgcatt
    61321 gaagatgtcg tcgttaaagt tattcctaaa gattatcaat taatgatgca aaaaattcat
    61381 ttgcacaaat cattacatga caatgaagat gaagcgatgt tagctgcatt ttacgatgac
    61441 agtaaaacaa tcgacgctaa acataaacca gccgttgtgt attaaggaaa gggggagata
    61501 cgatgggtga atttaaagga tttatgaagt atgacaaaca gtacttaggt gaattatcac
    61561 tggtagaccg tttgaagcat cataaagcat atcaacaacg atttactaaa gaagatgcct
    61621 ctatccaagg tgcgcgatgt atggattgtg gaacgccgtt ttgtcaaacc ggacaacagt
    61681 atggtaggga aacaataggt tgtccaattg gaaactacat tcctgaatgg aacgacttag
    61741 tgtatcatca agattttaaa actgcttatg aacgcttaag cgaaacaaat aactttcctg
    61801 actttacagg gcgtgtatgt cctgcaccat gcgaaagtgc ttgtgtgatg aagattaata
    61861 gagaatcgat tgcgattaaa ggtattgaac gcacaattat tgatgaagct tttgaaaatg
    61921 gttgggtagc gccgaaagtt ccgagtcgcc gtagagatga aaaagtggca atcgttggaa
    61981 gcggtccagc aggattaact gctgctgaag aacttaatct actaggatat caagtaacta
    62041 tttatgaacg tgctagagaa tcaggcggtt tattaatgta tggtattccg aatatgaaac
    62101 ttgataaaga tgtggttcga cgtcgtatta agttaatgga agaagcgggc attactttca
    62161 ttaatggtgt tgaagtaggc gttgatattg ataaagcaac gttagaatct gagtatgatg
    62221 ccattatatt atgtactggt gcacaaaaag gtagagattt acctttagaa ggacgcatgg
    62281 gtgatggtat acatttcgct atggattatt taactgaaca aacgcagctg ttaaatggag
    62341 aaattgatga tattacaata actgcaaaag ataagaatgt cattatcatt ggtgctggtg
    62401 atacaggggc agactgtgta gcgacagcat taagagaaaa ttgtaaatcg attgttcaat
    62461 ttaataaata tacgaaattg ccagaagcaa ttacatttac agaaaatgca tcatggcctt
    62521 tagcaatgcc ggtgtttaaa atggactatg cgcaccaaga gtacgaagct aagtttggta
    62581 aggaaccacg tgcatatggt gttcaaacaa tgcgttacga tgttgacgat aaaggacaca
    62641 tacgtggttt gtatactcaa attttagagc aaggcgaaaa tggtatggtc atgaaagaag
    62701 gacctgaaag attttggcct gctgaccttg tattattatc aatcggcttc gaaggtacag
    62761 aaccaactgt accgaatgct tttaacatta aaacggatag aaatcgaatc gtggcggatg
    62821 atacaaacta tcaaactaat aatgaaaaag tatttgctgc tggagatgct agacgtggtc
    62881 aaagtttagt tgtatgggcg attaaagaag gtagaggcgt agcgaaagca gtagatcagt
    62941 atttagcgag taaagtttgt gtataatctt tgtatggaaa tggtggttac gttgacgttg
    63001 tggcatgctg aatcgagttt gaaataatct agtatctatc aacgtcacat gctatcattg
    63061 taacctaaaa acaaaggttt gtaagacaac aaatagatta attataagta gtgatttttt
    63121 acattcgttt ataggtcaac tgtagtggaa gacaatgatt tgtggtaatc atgtaatgct
    63181 taaaaacaat attgactttt acagaacgtt catatatgat aaatattgtg ttt
//
LOCUS       DAKPJH010000003        56475 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.003, whole genome shotgun sequence.
ACCESSION   DAKPJH010000003 DAKPJH010000000
VERSION     DAKPJH010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 56475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56475
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.003"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(99..725)
                     /locus_tag="OY092_000139"
     CDS             complement(99..725)
                     /locus_tag="OY092_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HCX1075118.1"
                     /translation="MAKVLYITAHPFNELVSNSMAAGKAFIETYQQQHPDDEVKHIDL
                     FETYIPVIDKDVLTGWGKMSNGETLTDDEQMKVSRLSDILEEFLSADKYVFVTPMWNL
                     SFPPVVKAYIDAISIAGKTFKYSAEGPQGLLTDKKVLHIQSRGGYYTEGPAADFEMGD
                     RYLRTIMTFLGVPSYETIIIEGHNAEPHKTEEIKATSINNAEKLATTF"
     gene            934..1512
                     /locus_tag="OY092_000140"
     CDS             934..1512
                     /locus_tag="OY092_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HCX1075119.1"
                     /translation="MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHK
                     GQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRFFN
                     NELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHF
                     QRMKGGVGNAYAEDPKPFIDQLPDGERSLYDL"
     gene            1895..2992
                     /gene="ugpC"
                     /locus_tag="OY092_000141"
     CDS             1895..2992
                     /gene="ugpC"
                     /locus_tag="OY092_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HCX1075120.1"
                     /translation="MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKS
                     TTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLK
                     LRKVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGT
                     PREIYDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLD
                     KEIILGIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDS
                     RTQVMANDKITLAFDMNKCHFFDEKTGNRIV"
     gene            3005..4276
                     /locus_tag="OY092_000142"
     CDS             3005..4276
                     /locus_tag="OY092_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HCX1075121.1"
                     /translation="MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPN
                     QLTMWVDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLDAPVGKGPDIFF
                     LAHDNTGSAYLQGLAAEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNK
                     KLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSE
                     YDIHQLGLNSKHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNIN
                     EYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQ
                     KYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNG
                     KNPKQALDEATNDITQNIKILHPSQNDKKGD"
     gene            4279..5547
                     /locus_tag="OY092_000143"
     CDS             4279..5547
                     /locus_tag="OY092_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HCX1075122.1"
                     /translation="MTKRNPKLAALLSVIPGLGQFYNKRPIKGTIFFIFFISFISVFY
                     SFLNIGFWGLFTLGTVPKLDDSRVLLAQGIISILLVAFAIMLYVINILDAYRNAERFN
                     RNEEIKDPKARMVATWDKTFPYLLISPGTFLLIFVVVFPLIFMFGVAFTNYNLYNAPP
                     RHTLEWVGLDNFKTLFTIGVWRKTFFSVITWTLVWTLVATTLQIALGLFLAIIVNHPV
                     VKGKKFIRTVLILPWAVPSFVTILIFVALFNDEFGAINNDILQPLLGVAPAWLSDPFW
                     AKVALIGIQVWLGFPFVFALFTGVLQSISSDWYEAADMDGASSWQKFRNITFPHVIYA
                     TAPLLIMQYAGNFNNFNLIYLFNKGGPPVSGQNAGSTDILISWVYNLTFEFNNFNMGA
                     VVSLIIGFIVAIVAFIQFRRTSTFKDEGGL"
     gene            5549..6388
                     /locus_tag="OY092_000144"
     CDS             5549..6388
                     /locus_tag="OY092_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HCX1075123.1"
                     /translation="MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYG
                     AKMIPDNATFKNYAFLLFDDSSQYLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRF
                     VGRKYGLITFLILQMFPVLMAMVAIYILLNTIGLLDSLFGLTLVYIGGSIPMNAFLVK
                     GYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKIL
                     LRSPEKFTLAVGLFNFINDKYANNFTVFAAGAIMIAVPIAIVFLFLQRYLVSGLTTGA
                     TKG"
     gene            6462..7538
                     /locus_tag="OY092_000145"
     CDS             6462..7538
                     /locus_tag="OY092_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCX1075124.1"
                     /translation="MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASA
                     AEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAK
                     TTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRRA
                     VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANA
                     WGSWNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKD
                     GLRIHGEDMGTLYTKHVELESKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQ
                     AMVVTKILEAIYQSAKSGKAIYFE"
     gene            7563..8603
                     /locus_tag="OY092_000146"
     CDS             7563..8603
                     /locus_tag="OY092_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCX1075125.1"
                     /translation="MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMI
                     DVAKRFNIPQAVETPSELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTT
                     EECDRMIEAANKNHKLLTVAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVP
                     GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDW
                     GTFDHTKFDVDDHVTSYMTFANRASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFE
                     IYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKPEEARNVNALIEAI
                     YRSDLDNKSIQL"
     gene            8658..9626
                     /locus_tag="OY092_000147"
     CDS             8658..9626
                     /locus_tag="OY092_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HCX1075126.1"
                     /translation="MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCK
                     LDELLENEDKRQAFMKSITDRGLQISGFSCHNNPISPDPIEAKEADETLRKTIRLANL
                     LDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKE
                     QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQA
                     NAIHHFHAKDTYINQENVNMYGLTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQL
                     IINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMWWA"
     gene            complement(9987..10481)
                     /locus_tag="OY092_000148"
     CDS             complement(9987..10481)
                     /locus_tag="OY092_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002454321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HCX1075127.1"
                     /translation="MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLA
                     ITHVLIYVLAGVEAFINKDTFSFANGIGLVILIFAYIMLFMVIKTLGGIWTLKLFILP
                     NHPIIKSGLYKITKHPNYFLNIIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEK
                     LMNI"
     gene            10714..12093
                     /gene="uhpT"
                     /locus_tag="OY092_000149"
     CDS             10714..12093
                     /gene="uhpT"
                     /locus_tag="OY092_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HCX1075128.1"
                     /translation="MNFFDIHKIPNKGIPLSVQRKLWLRNFMQAFFVVFFVYMAMYLI
                     RNNFKAAQPFLKEEIGLSTLELGYIGLAFSITYGLGKTLLGYFVDGRNTKRIISFLLI
                     LSAITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYSTISRWAPRTKRGRYL
                     GFWNTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGIATLFIGKDDPEE
                     LGWNRAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNVFVYIVRIGID
                     NWAPLYVSEHLHFSKGDAVNTIFYFEIGALVASLLWGYVSDLLKGRRAIVAIGCMFMI
                     TFVVLFYTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVANGMTGSFA
                     YLFGDSMAKVGLAAIADPTRNGLNIFGYTLSGWTDVFIVFYVALFLGMILLGIVAFYE
                     EKKIRSLKI"
     gene            complement(12452..13210)
                     /locus_tag="OY092_000150"
     CDS             complement(12452..13210)
                     /locus_tag="OY092_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1075129.1"
                     /translation="MFKVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLI
                     QQHQPELVITDIRMPRKNGVDLLNDIAHLDCNVIILSSYDDFEYMKAGIQHHVLDYLL
                     KPVDHAQLEVILGRLVRTLLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIK
                     QSYQTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSLQLLDRHYKHY
                     EIADKVGFSEYKMFSYHFKKYLQMSPSDYCKQAK"
     gene            complement(13203..14759)
                     /locus_tag="OY092_000151"
     CDS             complement(13203..14759)
                     /locus_tag="OY092_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCX1075130.1"
                     /translation="MTAYKPYRHQLRRSLFASTIFPVFLVLIIGLVSFYAIYIWIEHR
                     TIHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPA
                     TLYYELSGPNQFITNNYEHLNTKNMYLFSTHQLKFKNSTYMLKIYMANTPRLIEIKKD
                     SRQFALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHEN
                     IEDGITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPL
                     KNNSELEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTI
                     QYLITLSPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIK
                     LHIESSEEARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGI
                     GMSSSRLQYVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYK
                     IPLSRGNVDV"
     gene            complement(14756..15724)
                     /locus_tag="OY092_000152"
     CDS             complement(14756..15724)
                     /locus_tag="OY092_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HCX1075131.1"
                     /translation="MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRP
                     ILNDFEKQEHVKIEIKHGSTQVLLSNLHNEDLSERGDVFMGGVLSETIDHPEDFVPYQ
                     DTSVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDITIRGYQDLLKPILKGKIAYS
                     NPNTTTTGYQHMRAIYSMHHRVSDVHQFQDHAMQLSKTSKVIEDVAKGKYYAGLSYEQ
                     DARTWKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVA
                     EFDAKSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ"
     gene            16312..18561
                     /gene="pflB"
                     /locus_tag="OY092_000153"
     CDS             16312..18561
                     /gene="pflB"
                     /locus_tag="OY092_000153"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCX1075132.1"
                     /translation="MLETNKNHATAWQGFKNGRWNRHVDVREFIQLNYTLYEGNDSFL
                     AGPTEATSKLWEQVMQLSKEERERGGMWDMDTKVASTITSHDAGYLDKDLETIVGVQT
                     EKPFKRSMQPFGGIRMAKAACEAYGYELDEETEKIFTDYRKTHNQGVFDAYSREMLNC
                     RKAGVITGLPDAYGRGRIIGDYRRVALYGVDFLMEEKMHDFNTMSTEMSEDVIRLREE
                     LSEQYRALKELKELGQKYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTS
                     TFLDIYAERDLKAGVITESEVQEIIDHFIMKLRIVKFARTPDYNELFSGDPTWVTESI
                     GGVGIDGRPLVTKNSFRFLHSLDNLGPAPEPNLTVLWSVRLPDNFKTYCAKMSIKTSS
                     IQYENDDIMRESYGDDYGIACCVSAMTIGKQMQFFGARANLAKTLLYAINGGKDEKSG
                     AQVGPNFEGINSEVLEYDEVFKKFDQMMDWLAGVYINSLNVIHYMHDKYSYERIEMAL
                     HDTEIVRTMATGIAGLSVAADSLSAIKYAQVKPIRNEEGLVVDFEIEGDFPKYGNNDD
                     RVDDIAVDLVERFMTKLRSHKTYRDSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPF
                     APGANPMHGRDQKGALSSLSSVAKIPYDCCKDGISNTFSIVPKSLGKEPEDQNRNLTS
                     MLDGYAMQCGHHLNINVFNRETLIDAMEHPEEYPQLTIRVSGYAVNFIKLTREQQLDV
                     ISRTFHESM"
     gene            18584..19339
                     /gene="pflA"
                     /locus_tag="OY092_000154"
     CDS             18584..19339
                     /gene="pflA"
                     /locus_tag="OY092_000154"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HCX1075133.1"
                     /translation="MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKI
                     SEPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHT
                     CLDTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARK
                     LSDMKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLG
                     IAYELEDVEAPDDEAVKAAYRYVNFKGKIPVEL"
     gene            19675..21438
                     /locus_tag="OY092_000155"
     CDS             19675..21438
                     /locus_tag="OY092_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase
                     membrane domain-containing protein"
                     /protein_id="HCX1075134.1"
                     /translation="MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILL
                     FNMMLKVAGQSQLTINNWMEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFD
                     RQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
                     EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFR
                     LVIEIVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFT
                     KLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYN
                     NTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYIELDTIMTKDKQFVVSHDNNL
                     KRLTGVNKNISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGK
                     EPADYTQRVIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKET
                     SLDFFVIEDFSYSPRLVNQAHMENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALAD
                     QIKEEKKDETYFDRSIRILFE"
     gene            complement(21602..21946)
                     /locus_tag="OY092_000156"
     CDS             complement(21602..21946)
                     /locus_tag="OY092_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN family protein"
                     /protein_id="HCX1075135.1"
                     /translation="MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALV
                     DQLYELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKHRLESIY
                     DSISNPLHSQKN"
     gene            22136..24106
                     /gene="coa"
                     /locus_tag="OY092_000157"
     CDS             22136..24106
                     /gene="coa"
                     /locus_tag="OY092_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylocoagulase"
                     /protein_id="HCX1075136.1"
                     /translation="MKKQIISLGALAVASSLFTWDNKADAIVTKDYNGKSQVKKESKN
                     GTLIDSRYYWEKIEALEKQFSSALALTDEYQYGGNEYKEAKDKLMERILGEDQYLLKK
                     KIDEYDYYKKWYKATYPNDNSKMYSFHKYNVYYLTMNEYNEITNSLKDAVEKFNNEVR
                     DIQSKNEDLKPYDENTEKQETDKIYEFVSEIDTVFAAYYSHEKFGIHAKELRAKLDII
                     LGDVHNPNRITNERIKKEMMEDLNSIVDDFFMETNQNRPTTIKKYDPNIHDYTKKKEN
                     KENFDKLVKETREAVEKADESWKNKTVKKYEETVTKSPFVKEEKKVEEPQLPKVGNQQ
                     EVKTTAGKAEETTQPLVKIPQGTITGEIVKGPDYPTMENKTLQGEIVQGPDFPTMEQN
                     RPSLSDNYTQPTTTNPILEGLEGSSSKLEIKPQGTESTLQGTQGESSDIEVKPQATET
                     TEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETNAYNVTTN
                     QDGTVTYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTYKKPSETNAYNVTTHANGQ
                     VSYGARPTQNKASETNAYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQVSYG
                     ARPTYKKPSETNAYNVTTHADGTATYGPRVTK"
     gene            complement(24288..24395)
                     /locus_tag="OY092_000158"
     CDS             complement(24288..24395)
                     /locus_tag="OY092_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075137.1"
                     /translation="MCVRTRLVSSSSVRLSKAIIIAVIVVYHLDVRGLF"
     gene            complement(24709..25893)
                     /locus_tag="OY092_000159"
     CDS             complement(24709..25893)
                     /locus_tag="OY092_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HCX1075138.1"
                     /translation="MQEAYIVAYGRSAAAKAKQGALFHERPDDVAAKVLQGVLKRIDG
                     KFNKNMIEDVIVGTAFPEGLQGQNIARTIALRTGLSDTVPGQTVNRYCSSGLQTIAIA
                     ANQIMAGQGDILVAGGVELMSAVPMGGNEPTNNPTLQYDDIGASYPMGLTAENVASQF
                     DVSREDQDAYAVRSHQRAYDAQRDGRFKNEIIPIQVNSVEYTNAGPKVHTNIFDQDEF
                     IRPDTTMEALAKLRTVFKADGTVTAGTSAPLSDGAGFVVLMSGDKVKELGVTPIARFV
                     GYKAVGVDPKIMGIGPAYAIPEVLSLSNLSVEDIDLIELNEAFASQTIASIKEVGLDI
                     SRTNVNGGAIALGHPLGATGAMLTARLLNEMGRRPDSRYGMVTMCIGVGMGAAAIFEY
                     VR"
     gene            complement(25923..28184)
                     /locus_tag="OY092_000160"
     CDS             complement(25923..28184)
                     /locus_tag="OY092_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HCX1075139.1"
                     /translation="MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDIVVDKNDPNLI
                     AKKSYDKITDKKRPLLFDLNLASHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQ
                     QVLQHAKEDALFATNTSGIPINAIAQVFNEKDQERFFGLHFFNPPRIMKLVELIPTSH
                     TKESIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVD
                     ALTGQAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLFDNGAL
                     GRKTKQGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLAHNLDVIFNAQD
                     EAGLFLWETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVK
                     KRMEDEFGDLPQWISDLDGGFYKKDETIEYATPVSHFVKDELWDKGDAKLSVTHDDQL
                     LLKLQSKNNVITDEFNDALVDAIDLLENDHYTSMVIYADGNNFSVGANLFLMKKAHED
                     GLVDDVVAQSIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYI
                     GLVEAGVGLLPSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARR
                     YGYLRDTDTIIFNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKAFIQGQLDA
                     QRRGHFISDHDYHIALNIATILAGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYER
                     IAHMLKTGKPLRN"
     gene            complement(28371..29582)
                     /locus_tag="OY092_000161"
     CDS             complement(28371..29582)
                     /locus_tag="OY092_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HCX1075140.1"
                     /translation="MTFEKETVLKTLFPEDVLSIAKGLTDGEVEFLQQVDSLLESKYR
                     ENINQHWIDATVPEDFFKNLGELNYFNNPLLYKDRPNAKMPSQLFQFFMSYLLARFDI
                     SLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHELRTCFALTEPEHGSDVAGGLE
                     TVAERQGDTWVINGEKKWIGGAHVSDVIPVFAVNKETGKPHCFVVRPEQDGVDIEVID
                     NKIALRIVPNALIKLTNVKVDEADRLQNITSFKDIAKILYSTRAGVAYMATGGMAGAL
                     RATLDYVTERKQFGKPISKYQLIQEKLAMMQGNLAQAMATCAQLANMQAHGEYDEVAT
                     STAKMMNALRLRETVAMGRGITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVI
                     GRALTGDSAFV"
     gene            complement(29694..31199)
                     /locus_tag="OY092_000162"
     CDS             complement(29694..31199)
                     /locus_tag="OY092_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HCX1075141.1"
                     /translation="MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYL
                     TSQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKL
                     LFYAEKHLSSLTDIDQNLLHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSG
                     TTGSPKGVMFSYESFVHNGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGG
                     TLILQRYFNGEELNDMIAQYHPTFIIMIPTMYYSTLRASNFNPENFKAMDYIIQGGSQ
                     PLPSIQAAFKQYGINIINGYGLTEAPLVLVNTPENSKRKPMSIGKAVMFVDARILDDN
                     GEEVPTGEIGELAIKAKNVTPGYWNKPAETAKAFHGRYLLTGDLAKMDDDGDIFIIDR
                     KKELIITGGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYA
                     EILDQHMRSRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL"
     gene            complement(31225..32802)
                     /locus_tag="OY092_000163"
     CDS             complement(31225..32802)
                     /locus_tag="OY092_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HCX1075142.1"
                     /translation="MEVTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLA
                     QHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNN
                     DIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVT
                     INDETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNTKANHGKVIVQ
                     VKALVDDYQLKPNEVVIPGNLVDYVYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEP
                     ALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDVQPILDVGIFGG
                     FVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQHGNVNVSYFNDRLN
                     GCGGFIDITQSVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQY
                     SQSLEQEVYFVTDRAVFELTNQGLKLIEIAPGLDLHKDILNQMAFKPIIADHLKLIDT
                     SIYKEKWGQLKQSIHKV"
     gene            33161..33832
                     /locus_tag="OY092_000164"
     CDS             33161..33832
                     /locus_tag="OY092_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HCX1075143.1"
                     /translation="MRVNVLQHTPNEGVGYIGEWAKESGHEVYIYHPYMNDGVLPLAE
                     ETDMLVILGGPMNPDDEMPWIQSERELILVLMAQNKPIYGACFGAQQISKALGYAVLK
                     SPVKEVGWDDVYLESEIIPNIPSRLKALHWHEDMFQIPQQAELLFSGNHIRNQGFIID
                     HHVIGLQFHFEPGPDDVREIVLNDAQYINHSILEQSAEDILAFEVPKQNRQAIFRILD
                     FITQA"
     gene            34055..35197
                     /locus_tag="OY092_000165"
     CDS             34055..35197
                     /locus_tag="OY092_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HCX1075144.1"
                     /translation="MSSASTQSTKTSDIHNESIDKQMEAKAHETAQNTDLKNEARSLF
                     DNATKSIGRLAGNDESLNLNLKDMFSEVFKPHTKNEADEIFIAGTAKTTPAICDISEE
                     WGKPWLFSRVFIAFTVTFIGLWVMAAIFNNTNAIPGLIFIGALTVPLSGLFFFYESNA
                     FKNISIFEVIIMFFIGGVFSLLSTMVLYRFVVFSDQFERFGSLTFFDAFLVGLVEETG
                     KALIIVYFVNKLKTNKILNGLLIGAAIGAGFAVFESAGYILNFALGENVPLLDIVFTR
                     AWTAIGGHLVWSAIVGAAIVIAKEQHGFEFKDIFDKRFLIFFLSAVGLHGIWDTSLTV
                     LGSDTLKIFILIVIVWILVFILMGAGLKQVNLLQKEFKEQQKKVDE"
     gene            complement(35510..36985)
                     /locus_tag="OY092_000166"
     CDS             complement(35510..36985)
                     /locus_tag="OY092_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCX1075145.1"
                     /translation="MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPYE
                     TDVPVKIGAAESLFKTNDQGKIEKVLVKSYHQPNDKTLDIELKDNIKFQNGQKLTAEK
                     VKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNYAYPELVSELANPFMAIYDTDA
                     KSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNL
                     ESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMYNHTNKKMTKSVREALDHI
                     IDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKALLAKDGYTKEHPLK
                     IKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTI
                     PRGDTGYFFNQAYKKDGAINKGDYNNSNVDDLINQLNHTVDIKERHNISNDIIKLSSR
                     DVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER"
     gene            complement(37183..37539)
                     /locus_tag="OY092_000167"
     CDS             complement(37183..37539)
                     /locus_tag="OY092_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HCX1075146.1"
                     /translation="MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDI
                     APSTELRQWFQHDPKLFGAFKEKYEKELRDQDVQKEAFEKLKDIVNQHNHVLLLYSAK
                     DTKHNQAVVLQQLLNT"
     gene            complement(37696..37869)
                     /locus_tag="OY092_000168"
     CDS             complement(37696..37869)
                     /locus_tag="OY092_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075147.1"
                     /translation="MKLNQRYVKVFALYFVSIVTANIVVKNNNLIKTLIQTLAGYTVF
                     AVGLKYLTKRKNK"
     gene            complement(37895..39040)
                     /locus_tag="OY092_000169"
     CDS             complement(37895..39040)
                     /locus_tag="OY092_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide dioxygenase"
                     /protein_id="HCX1075148.1"
                     /translation="MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFN
                     QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENL
                     LKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQE
                     SEDIKSFTVETEEYDFSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGDKNHLTFGVKR
                     DVTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMY
                     EAASAKGLDTQMVQVAENEQHLPFKDNFNSIASHHDNAKLYTHLKDKQGYIGAEELKA
                     FLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV"
     gene            39195..39302
                     /locus_tag="OY092_000170"
                     /pseudo
     CDS             39195..39302
                     /locus_tag="OY092_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498802.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            39613..40566
                     /locus_tag="OY092_000171"
     CDS             39613..40566
                     /locus_tag="OY092_000171"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HCX1075149.1"
                     /translation="MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV
                     RGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKI
                     FKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLL
                     SEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQT
                     RDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYDEEDVYIGVPA
                     VINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAESEELK"
     gene            complement(40887..42416)
                     /locus_tag="OY092_000172"
     CDS             complement(40887..42416)
                     /locus_tag="OY092_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCX1075150.1"
                     /translation="MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAY
                     PILDITLLQNIFTLMSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMN
                     ATMNGLLTITGTLAKDQLAQNGQGMVLGIQTVETGVFGGITTGIMTAILHNKYHKVVL
                     PPYLGFFGGSRFVPIVTAFAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYG
                     FILRLLGPLGLHHIFYLPFWQTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGV
                     SRFMSGRFITMMFGLCGAALAIYHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSF
                     LFVAPILYVIHAFFDGLAFMMADIFNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVI
                     PIGIVWFCLYYIVFRFLITKFNFKTPGREDKAAAQQVEATERAQTIVAGLGGQDNIEI
                     VDCCATRLRVTLHQNDKVDKVLLESTGAKGVIQQGTGVQVIYGPHVTVIKNEIEELLG
                     D"
     gene            42778..43713
                     /locus_tag="OY092_000173"
     CDS             42778..43713
                     /locus_tag="OY092_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HCX1075151.1"
                     /translation="MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVD
                     KNTTNALNVLDIMGRQDIAVAKGADRPLIKSAAFASEIHGESGLDGPKLPSTPSRQAV
                     AMPASDMIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNW
                     TPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADDLVIERFESINNPVAQFVV
                     ELLQFFKKTYKTHFNMDGGPIHDACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAV
                     DLNHVTGKPANAYFATAVDVEEVWNLIDYKLRTYE"
     gene            43823..43920
                     /locus_tag="OY092_000174"
                     /pseudo
     CDS             43823..43920
                     /locus_tag="OY092_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498807.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            44045..46141
                     /locus_tag="OY092_000175"
     CDS             44045..46141
                     /locus_tag="OY092_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HCX1075152.1"
                     /translation="MNGDNQQILREIVLNPTIHGKELESIFGLSRRQLGYRIQKINLW
                     LEQEGYPKLERTSQGNFIVSSEIMTLFKRDVSEQQMLNGNNVIFSIETRRYYLMLMLF
                     SKENAMSLNHFSIDLQVSKNTVIHDINHVKEQLENHGLSLKYSRKHGYEIVGDEFEVR
                     RFFIKLIDQRLNHDITKSEVLKALNLTFEDIAYQKDKIKQVEQFLKSRFIDKSLSSLP
                     YVLCVIRRRIQSGHVMNPLNINYQYLRDTKEYQATEIMTQHEPDLPEAEKLYLTLHLL
                     STSVQWTDLQESDSISNLTMAIAQMIHHFEQITFINIEDKEKLSQQLLLHLTPAFYRI
                     KYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYFGKSLPDNEIAYLTMLFGGSLRR
                     QDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIFLDAISLRTFENYTLDYDIVF
                     SPMFVLTHKKLFITKVALSENEQRKLRKEVMKYINKESADIDKEINKLMALIERTTTV
                     NDITELRDGLEDFIANYNSISTINGSIVTQNKTLDLADLIPARHVKRIHHVENIDEAI
                     AKASDVLVANHFIDIKYIHEMQQVFDDSYMVIMQNIAIPHAYSEKHVHKTAMSMLILQ
                     EPIYMSDGTAIHIIVPIAAVDKVTHLRALLQLRDVAQDNDAIKRIIQSRKNSDVNEIL
                     KNYSNKEARENGWDSN"
     gene            46126..46593
                     /locus_tag="OY092_000176"
     CDS             46126..46593
                     /locus_tag="OY092_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCX1075153.1"
                     /translation="MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDA
                     VIDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVK
                     IVFMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLEYN"
     gene            46616..46894
                     /locus_tag="OY092_000177"
     CDS             46616..46894
                     /locus_tag="OY092_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCX1075154.1"
                     /translation="MKQVLVACGAGIATSTVVNNAIEEIAKEHNIKVDIKQIKITEVG
                     PYEDTADLLVTTAMTKKEYKFPVINARNFLTGIGIEETKQQILTELQK"
     gene            47121..48380
                     /locus_tag="OY092_000178"
     CDS             47121..48380
                     /locus_tag="OY092_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCX1075155.1"
                     /translation="MSYFTDFVRGFLDLGATVILPVVIFLLGLFFRQKIGAAFRSGLT
                     IGVAFVGIFLVIDLLVKNLGPAAQAMVKNLGVSLNVIDVGWPATSSIAWASSVAAFII
                     PLGIIVNVVLLVTKVTKTMNVDIWNFWHYTFTAAMVYAVSGSIWQALLAAVIFQVICL
                     KVADWTAPMMSEFFDLPGVSIATGSTISYAPGIYLVKLLQKVPGLNKLDADPETIQKR
                     FGAFGESIFVGLILGLGIGVLAGYKPGDIINLGMSMAAVMVLMPRMVKILMEGLMPVS
                     ESARTWLNKRFGEREIYIGLDAAVALGHPAVISTALILVPITVLLAVILPGNQVLPFG
                     DLATIPFVVAFIVGAARGNIIHSVIVGTIMIAISLYIATDVAPIFTDMAKGTNVQMPK
                     GSSEISSIDQGGNIVNYLIFKLFSLFN"
     gene            48398..49453
                     /locus_tag="OY092_000179"
     CDS             48398..49453
                     /locus_tag="OY092_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCX1075156.1"
                     /translation="MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIH
                     TYEGHYKVNFPVTLGHEFSGEIVEVGADVKDFKVGDRVTSETTFYICNECEYCESKDY
                     NLCNHRKGIGTQVDGAFTNYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQV
                     NSGDVAVVMGPGPIGLLVAQVLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQT
                     DLKTYINGITDGYGADVVVECSGAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEK
                     VIQKEITVVGSRSQKPADWEPSLRLMADGLVNAEALVTKIYDISKWDEAYQHLKSGEG
                     IKALLKPLDLDENEGEN"
     gene            49455..49601
                     /locus_tag="OY092_000180"
     CDS             49455..49601
                     /locus_tag="OY092_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075157.1"
                     /translation="MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKK
                     KVVN"
     gene            49625..50668
                     /locus_tag="OY092_000181"
     CDS             49625..50668
                     /locus_tag="OY092_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCX1075158.1"
                     /translation="MKALKLYGVEDLRYEDNDKPVIESANDVIVKVRATGICGSVTSR
                     YKKMGPYIQGMPFGHEFSGVVDAIGSDVTHVKVGDKVTGCPAIPCYQCEYCLKGEYAR
                     CEKLFVIGSYEPGSFAEYVKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQP
                     GMTVAVMGCGSIGLLAIQWARIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEEDLE
                     KFIENHYANQIDLAIESSGAKVTIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKIL
                     RNELTVCGSWNCLSSDFPGKEWTATLHYMKTKDINVKPIISHFLPLEKGPETFDKLVN
                     KKERFDKVMFTIY"
     gene            51196..51912
                     /locus_tag="OY092_000182"
     CDS             51196..51912
                     /locus_tag="OY092_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HCX1075159.1"
                     /translation="MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVS
                     EFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNINGIN
                     NDDVIVTHDAVRPFLTQRIIKENIEVAAKYGAVDTVIEAIDTIVMSKDKQNIHSIPVR
                     NEMYQGQTPQSFNIKLLQDSYRALSSEQKEILSDACKIIVESGHPVKLVRGELYNIKV
                     TTPYDLKVANAIIQGDIADD"
     gene            51905..52930
                     /locus_tag="OY092_000183"
     CDS             51905..52930
                     /locus_tag="OY092_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCX1075160.1"
                     /translation="MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRY
                     YTGRRDENVLRQKLPMSLVHEAVGEVVFDSTGVFEKGTKVVMVPNTPTEQHHIIAENY
                     LASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKS
                     IPLKTSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFSFVDDIFTVNQIP
                     DDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFEQVVDLYHKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGK
                     TVLKWTI"
     gene            52952..54646
                     /locus_tag="OY092_000184"
     CDS             52952..54646
                     /locus_tag="OY092_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000167965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HCX1075161.1"
                     /translation="MTKTKQAIHIDNIYWERVQLYIEGHSEGVDLTSGQFVLRNLTET
                     KTLEANEMKIDGNTFICRFNVAILDDGYYLPMDKYLFVYHDQLEYIGQLNPNIIDQAY
                     AALNEEQIEEYNELTTQNGKANYVLANEAKVFRKGGVSQHTVYTITPEIASDVNEFVF
                     DIEITLPQEKSGVIATSAHWLHKQGHKASFESRSFLFKAIFNITKLLHIKRSKTILFT
                     SDSRPNLSGNFKYVYDELLRQKVDFDYDIKTVFKANITDRRKWRDKFRLPYLLGKADY
                     IFVDDFHPLIYTVRFRPSQEIIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKA
                     YVSSETDIPFYAEAFGIREENVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKV
                     ILFAPTFRGNGHGTAHYPFFKIDFERLARYCEKHNAVVLFKMHPFVKNRLNISREHRQ
                     YFIDVSDHREVNDILFVTDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEP
                     YESFVPGKIVQSFDALMDALDNEDYEVEKVVPFLDKHFKYQDGRSSERLVKDLFRR"
     gene            55075..56244
                     /locus_tag="OY092_000185"
     CDS             55075..56244
                     /locus_tag="OY092_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HCX1075162.1"
                     /translation="MIKTTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNP
                     KALYEYLTEHSDAQLIWGVKKGYEHIFQQHNVPYVKKFSMKWFLAMPRAKAWMINTRT
                     PDWLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQNYQDGFTKESQRWDYLVSP
                     NPYSTSIFQHAFHVSRDKILETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMY
                     APTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDV
                     SDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKE
                     LPGPIVENQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTIFK"
BASE COUNT        18997 a         9015 c        10512 g        17951 t
ORIGIN      
        1 taaatgtgtg gaaataatag gtatttataa aaaagtagga aatgcataca attaaaaact
       61 gtgtgacgtt tgaggagtca cacagtgtaa ttaaaaattt aaaaagttgt tgctaatttt
      121 tcagcattat taatactagt tgctttaatt tcttcagtct tatgaggttc agcattgtgt
      181 ccttcaataa tgattgtttc atatgatggc acacctaaga atgtcataat tgttcttaaa
      241 taacggtcac ccatttcaaa atcagcagca ggtccttcag tataatatcc accacgtgat
      301 tgaatgtgta atactttttt gtcagttaac aaaccttgag gtccttcagc agaatattta
      361 aaagttttac ctgcaattga aatggcatca atatatgctt tgactacagg tgggaaagaa
      421 aggttccaca tcggcgttac aaatacatat ttatctgcgc ttaaaaattc ttctaaaatg
      481 tcactcaatc ttgaaacttt catttgttca tcatcagtta acgtttcgcc attgctcatt
      541 tttccccaac cagttaatac atctttgtca ataactggaa tataagtttc aaataaatca
      601 atatgtttca cttcatcatc aggatgttgt tgttgatatg tttcgataaa tgctttacca
      661 gccgccatag aatttgatac cagttcatta aaagggtgtg ctgtaatata taatactttt
      721 gccatttgaa aattctcctc tggttctgtt attttcttaa gtataattat tatactagat
      781 ataaaatttg atatcaataa aaatattcaa attaccatca ttttcttcat ctatatttgg
      841 cagtactact aaagtatgag tgcatttaat tatgaaatag ttgatttaga atatatactt
      901 aatacccaaa atatatgaag gatggatgcc actatgacaa agcgaccaaa acgtattttg
      961 gcaacaatta tcatttttct ttcactatta tttacgatta tttatataga tgacattcaa
     1021 aaatggttta accaatatac cgataaattg acacaaaatc ataaaggaca aggacactca
     1081 aaatgggaag acttttttag agggagtcgg attactgaga cttttggtaa atatcaacat
     1141 tcaccatttg atggtaagca ttatggcatt gattttgcat tgccaaaagg tacaccaatt
     1201 aaagcgccga cgaatggtaa agtaacacgt ttctttaata atgaattagg cggcaaggta
     1261 ttacagattg ccgaagacaa tggagaatat caccagtggt atctacactt agacaaatat
     1321 aatgtcaaag taggtgatcg agtcaaagca ggtgatatta ttgcatattc aggcaataca
     1381 ggtaaacaaa cgacaggcgc acatttacat tttcaaagaa tgaagggtgg cgtaggtaat
     1441 gcatatgcag aagatcctaa accgtttatt gatcagttac ctgatgggga acgtagccta
     1501 tatgatttgt agctatagaa gagtgcccgc agtctaaaaa attaagcaat cattgtgtga
     1561 gtatgatact tacacaatga ttgctttttt caatgaaaat cgaaatgcta aggcataatt
     1621 gtttgattta gatattactt aaaatgtaag acaaggttgt tagcattggc agtgaaatat
     1681 cgcacgtaaa aaatcattat tgccacacca aaaatagttg tgcgctatat caattttctg
     1741 tataaaagtt taattctgac agtaatgtaa acgtttacaa tttatgattg acattaataa
     1801 taagtgacta tatgatttat gtaagtattt atgcaaacgt tttcacaaag tgtattgcac
     1861 aatcaaactg taaacaaagt atgggaggca taacatggca gaactaaagt tagagcatat
     1921 taaaaagacg tatgataaca acaatactgt agtgaaagat ttcaatctac atattactga
     1981 caaagaattc attgtatttg ttggaccatc gggatgtggt aaatcaacaa cattacgaat
     2041 ggttgctgga ctagagtcta tcacatctgg agatttttat attgatgggg aacgcatgaa
     2101 cgatgttgaa ccaaagaata gagatattgc gatggtattt caaaactatg cattatatcc
     2161 acatatgact gtttttgaaa atatggcatt tgggctaaag ctacgtaaag taaataaaaa
     2221 agagattgaa caaaaagtta atgaagcagc tgaaatatta ggattaactg agtatcttgg
     2281 tcgtaaacca aaagcgttat ctggtggaca gcgtcaacgt gttgctttag gtagagctat
     2341 tgttagggat gcgaaagtct ttttaatgga tgaaccatta tcgaatcttg atgcgaagct
     2401 tcgagtacaa atgcgcacag aaatattgaa attacataag cgacttaata ctacgacaat
     2461 ttatgttaca catgatcaaa ctgaagcatt gacgatggct agtcgaattg ttgttttgaa
     2521 agatggcgac attatgcaag tcggcacacc tagagaaata tatgatgccc ctaattgcat
     2581 atttgtggcg caatttatcg gctcaccagc aatgaatatg ttgaatgcta cagttgaaat
     2641 ggacggattg aaggtaggaa cacaccattt taaattacat aataaaaaat ttgaaaagtt
     2701 aaaagctgct ggctacttag ataaggaaat tattttaggt attcgagctg aagacattca
     2761 tgaagaacca atatttattc aaacctctcc agagacacaa tttgaatctg aagtagttgt
     2821 atccgaactg ttaggttcag aaattatggt acatagcaca ttccaaggaa tggaattgat
     2881 ttctaaatta gattcaagaa cacaagtgat ggcgaacgac aagattacac tagcatttga
     2941 tatgaataag tgtcactttt ttgatgaaaa aacaggaaat cgtatcgtct aagggggagt
     3001 attcatgtct aaaattttaa aatgtatcac gttagccgtg gtaatgttat taatcgtaac
     3061 tgcatgtggc cctaatcgtt cgaaagaaga tattgataaa gcattgaata aagataattc
     3121 taaagacaag cctaaccaac ttacgatgtg ggtggatggc gacaagcaaa tggcgtttta
     3181 taaaaaaatt acggatcaat atactaaaaa aactggcatc aaagtaaagc ttgtaaatat
     3241 tggtcaaaat gatcaactag aaaatatttc gctagacgct cctgtaggaa aaggtccaga
     3301 tatctttttc ttagcacatg ataatactgg aagtgcctat ctacaaggct tagctgctga
     3361 aatcaaatta tcaaaagatg agttgaaagg tttcaataag caagcactta aagcgatgaa
     3421 ttatgacaat aagcaactag cattgccagc tatcgtagaa acaaccgcac ttttctataa
     3481 taaaaaatta gtgaaaaatg caccgcaaac gttagaagaa gttgaagcta atgctgccaa
     3541 actaactgat agtaaaaaga aacaatacgg tatgttattt gatgctaaaa atttctattt
     3601 taattatccg tttttattcg gcaatgatga ttatattttc aagaaaaatg gcagtgaata
     3661 tgatattcat cagctaggac taaattcaaa acatgtcgtc aaaaatgctg aacgattaca
     3721 aaaatggtac gacaaagggt atcttcctaa ggcagcaaca catgatgtca tgattggtct
     3781 ttttaaagaa ggaaaagtag gacaatttgt cactggaccg tggaacatta atgaatatca
     3841 agaaacgttt ggtaaagatt taggagtaac aacattacct acagatggtg gcaaacctat
     3901 gaaaccattt ctcggtgtac gtggttggta tttatctgaa tatagtaaac ataagtattg
     3961 ggctaaagat ttaatgttgt atatcactag taaagataca ttacaaaaat atacagatga
     4021 aatgagcgaa attactggac gtgttgacgt gaaatcatct aatccaaatt taaaagtgtt
     4081 tgaaaagcaa gcacgtcatg ctgaaccgat gcctaatatt cctgaaatgc gacaagtttg
     4141 ggaaccgatg ggcaatgcaa gcatatttat ctcaaatggt aagaatccta aacaagcgtt
     4201 agatgaggcg acgaatgata taacgcaaaa tattaagatt cttcatccat cacaaaatga
     4261 taagaaagga gattagttat gacgaaacgt aaccctaaat tagcagcatt attatctgtt
     4321 atacctggtt tgggacagtt ttataataaa agacccatta aagggacgat attttttatc
     4381 tttttcatca gttttatttc tgtattttat agctttttaa atattggttt ttggggattg
     4441 ttcacattag ggacagtacc taagttagac gattctcgtg tcttacttgc acaaggtatt
     4501 atttctatct tactcgttgc ttttgcaatc atgctatatg tcattaatat tttagatgca
     4561 tatcgtaatg ctgaacgatt taatcgcaat gaggaaataa aagatccgaa ggcacgtatg
     4621 gttgcaacat gggataagac tttcccatac ttactaatct caccaggtac attcttattg
     4681 atatttgtag ttgtatttcc attaatattt atgtttggag tagcatttac aaattacaat
     4741 ttatacaacg cgcctccgag acacacatta gaatgggtcg gtttagataa cttcaaaacg
     4801 ttattcacaa ttggcgtttg gcgtaaaaca tttttcagtg ttattacttg gacattagta
     4861 tggacgcttg ttgcaacgac acttcaaatt gcattagggc tgtttttggc aattattgta
     4921 aatcaccctg ttgtcaaagg taagaaattt atccgtactg tgttaatcct accttgggct
     4981 gtaccatcat ttgtgacaat tttaatattt gtagcgttat ttaatgatga atttggtgcg
     5041 ataaataatg atattttgca acctttatta ggtgtagcac cagcatggtt aagtgatccg
     5101 ttttgggcaa aagtggcatt aatcggcatt caagtatggc ttggtttccc atttgtcttt
     5161 gcactgttca ctggtgtact gcaaagtatt tcatcagatt ggtacgaagc agcagatatg
     5221 gatggtgcgt ctagttggca aaagtttaga aatatcacat ttccacatgt catttacgcc
     5281 acagcgccat tgttaattat gcaatatgca ggtaatttca ataattttaa tcttatttat
     5341 ctatttaata aaggtggtcc accagtgtca gggcagaatg ctggaagtac agatatcttg
     5401 atatcttggg tgtataatct gacatttgag tttaacaact ttaacatggg tgcagttgtg
     5461 tcattaatta ttggatttat tgttgctatt gtcgcattta ttcaattcag acgtacaagt
     5521 acgtttaaag atgagggagg tttataagat gacaaagaag aaaaacatat taaaagcaat
     5581 cggtatttac agttttatag cgatgatgtt tgtcatcatt ttatatccac tactgtggac
     5641 atttggcatt tcccttaatc caggtacgaa cttgtatggt gccaaaatga taccagacaa
     5701 tgcaacattt aaaaattatg cattcttact attcgatgac agtagtcaat acctgacttg
     5761 gtataaaaat acgcttatcg tagcatctgc aaatgcactg tttagtgtga tatttgtcac
     5821 gttaacagca tatgcttttt ctagatatcg ctttgttggt cgtaaatacg ggctgattac
     5881 atttttgatt ttacaaatgt tccctgtatt aatggcaatg gtcgcaatct atattttgct
     5941 aaatacaatt ggattattag attctttatt tggactaaca ctggtatata ttggtggatc
     6001 aataccgatg aatgcctttt tagtgaaagg ttacttcgat acgattccaa aagaacttga
     6061 tgaatctgcc aaaattgatg gtgcagggca tatgcgtatt ttcttacaaa ttatgcttcc
     6121 attagctaag ccgattttag cagttgttgc tttgttcaat tttatggggc catttatgga
     6181 ctttatatta cctaaaatac tattaagaag tcctgaaaaa ttcacattag cagttggatt
     6241 gttcaacttt attaatgata agtatgcaaa taatttcaca gtgtttgcag caggggcaat
     6301 tatgattgca gtacctatag caatcgtatt cttgttcttg caacgctatt tagtatcagg
     6361 tttaacaaca ggtgcgacaa aaggttagtt tgaaattagg agtggggcag aattgataaa
     6421 gaaccactaa tgacgataaa gattaaaagg aggacgttat gatgacgatt aaagttggaa
     6481 tcattgggtg tggtggtatt gcgaatggca agcacatgcc aagtttacaa aaagttgaaa
     6541 atgttgaaat gatcgcattt tgtgacgtag acatttcgaa agcagcgagt gcggcagaag
     6601 catacggaac tgacaatgca aaggtttatg atgattacaa agcattgtta aaagatgaca
     6661 cgattgatgt tatccatgtt tgtacgccaa atgactcgca ttgtgaaatt actgtagcag
     6721 ggttgcatgc cggtaaacat gtgatgtgtg aaaaaccaat ggctaaaacg acagcagaag
     6781 ctcaaaaaat gatagataca gctaaatcaa caggtaaaaa attaacaata ggttatcaaa
     6841 atcgcttcag accagatagt caatttttac atcaagcagc gcaacgtggc gacttaggag
     6901 acatttactt cggaaaggca catgccattc gtcgtcgagc agtaccaaca tggggtgtct
     6961 ttctagacga agaagctcaa ggtggaggac cattaatcga tatcggtaca cacgctttag
     7021 atttaacgtt atggatgatg gataattatg agccagaatc agtgatgggt tcaacattcc
     7081 ataaattaaa taaacagcat catgcggcaa acgcttgggg ttcatggaat ccagatgaat
     7141 ttacagttga agattctgcg tttggattta ttaaaatgaa gaatggagcg acgatcattt
     7201 tagaatccgc ttgggcgatt aattctttag aagtggatga ggcaaaatgt tcattatcag
     7261 gaacgaaagc aggtgctgat atgaaagatg gtctacgtat tcatggtgaa gacatgggca
     7321 cactttatac caaacacgtt gaattggaaa gcaaaggcgt cgacttttat gaaggtaatg
     7381 aagtggatga agctgaagaa gaagcaaaag cttggattga tgcagttgta aatgatactg
     7441 aaccagttgt gaaaccggaa caagcaatgg tagttacaaa aattcttgaa gcgatttatc
     7501 agtctgcaaa atcaggcaaa gcaatttact ttgaataaca tcatacggta aggaggcaca
     7561 tcatgacaaa attaaaagtt ggtgtgatag gtgttggtgg tattgcacaa gaccgtcata
     7621 ttccagcatt gctgaaactc aaagacacag tctcattagt tgcagtacaa gatattaata
     7681 cagtgcagat gattgatgtt gcgaagcgct ttaatatacc tcaggcagtt gagacaccta
     7741 gcgagctgtt taaacttgtt gatgcggtgg tcatttgtac acccaataaa ttccatgctg
     7801 atctttctat agaagcattg aaccatggtg tccatgtctt atgcgaaaag ccaatggcaa
     7861 tgacgacgga agagtgtgat cgcatgattg aagcggctaa taaaaatcac aaattattaa
     7921 ctgtcgctta tcattatcgt cacacagatg tcgctatgac tgctaaaaaa gcaattgaag
     7981 caggtgtggt tggtaaacca ttagtagcac gtgtacaagc gatgcgtagg cgtaaagtac
     8041 ctgggtgggg cgtttttacc aataaagcgt tgcaaggtgg cggtagttta atcgattatg
     8101 gttgccactt gttagactta tctttgtggc tattaggtaa agatatggtg ccgcatgaag
     8161 tgctaggaaa aacatataat caattgagca aacaaccgaa tcaaattaat gattggggaa
     8221 catttgatca cactaaattt gatgtcgatg atcatgttac tagttatatg acatttgcca
     8281 atcgagcaag catgcagttt gaatgttcgt ggtctgcaaa tataaaggaa gataaggtac
     8341 acgttagttt atcaggagaa gatggcggta tcaatttatt tccatttgaa atatatgagc
     8401 cccgctttgg aactattttt gaaagcaaag ctaatgttga gcataacgaa gacattgctg
     8461 gtgagagaca ggcgcgtaac tttgtcaatg cgtgtttagg tatagaagag attgtggtga
     8521 aaccggaaga agcacgcaat gtaaatgccc ttatagaagc gatttatcgt agtgatcttg
     8581 ataataagag tatacaactt taatgattat catatatgat acaaaattct caatataaaa
     8641 agaaggagtg cttttcaatg aaaataggtg tattttcagt attattttac gataaaaatt
     8701 ttgaagatat gttagattat gtcgcagaat ctggattgga tatgattgaa gttggaacag
     8761 gtggtaaccc aggagataaa ttttgtaagt tagatgagtt gttagaaaat gaagacaagc
     8821 gacaagcatt tatgaagtca atcacagaca gaggcttaca aataagtggt ttcagttgtc
     8881 ataacaatcc aatttctcca gatccgatag aagcgaaaga agccgatgaa acgttacgta
     8941 aaacaatccg tttagcaaat ctattagacg tgccagttgt taatacattt tctggcattg
     9001 cagggtcaga tgataccgct aaaaagccta attggcctgt tacaccttgg ccaacagcct
     9061 actctgaaat ttatgattat cagtggaatg aaaagttgat accatattgg caagatttag
     9121 ctgagtttgc aaaagagcaa gatgtaaaaa ttgccataga gttgcatgca ggatttttag
     9181 tgcatacacc atatacaatg ttgaagttac gtgaggctac aaatgaatat atcggtgcta
     9241 acttagatcc tagtcattta tggtggcaag gtattgaccc aattgctgcg attcgcatat
     9301 taggccaagc aaatgcaatt catcacttcc atgctaaaga tacgtatatt aatcaagaaa
     9361 atgtaaatat gtatggtcta actgatatgc aaccatatgg taacgttgcg acaagagcat
     9421 ggacattccg tacagttggt tatggacata gtccatatgt atgggcagat atcataagtc
     9481 aacttattat taatggatat gattatgtat taagtattga acatgaagat cctattatgt
     9541 cagtagaaga aggtttccaa aaagcttgtc aaactttgaa atctgttaat atttacgaca
     9601 agccagcaga catgtggtgg gcataatacg aactcgaggt tagtctgaag tttgtctgaa
     9661 gtaagactga tggcagtgtt gaatgaatgc atatgtcgcc aagccattgc caaaaatttc
     9721 acaccttaaa tcatgtcatt gtttgtaaag aaggtgtact ttatataagt gtttagcgat
     9781 ggtcataccc attcacagta acaatcctca ccattgaaaa gagtatataa ccttttcgat
     9841 agtgaggtat atgataataa aaaaagcctg ttgtcacaat ggtcatagac acgacatact
     9901 ttaaaggttt ctgaatataa tatttcagaa cgcactttaa agatggacgt cgatgtcgac
     9961 taatgtgatg acaggctttc atctttttaa atattcatta atttctcttc ttgtttaata
    10021 cgtacatata agaaatacgc atacggtact aataaaatag ttgtatatgt tgcgtgtgtt
    10081 aataataata caccgattaa ttcaggaatg atgtttaaga agtaatttgg gtgttttgta
    10141 attttatata atccagattt aataatagga tggttaggta aaatgaataa ttttaatgtc
    10201 caaataccac ctaaagtttt aataaccata aataacatga tataagcaaa gattaatata
    10261 actaagccaa taccatttgc aaagctaaat gtatctttat taataaatgc ctctacacca
    10321 gccaatacat aaattaaaac gtgtgttatt gctaaaaact tcgaattttt aacgccatat
    10381 tcaactgcac cgtctgcttt taattgtttt gagtgattaa tagatatctt taagctgaca
    10441 agtctgatac agaaaaagat aagtaatata gatagaatca tgatgtcctc cgtcattatg
    10501 tcatatgtat aaacgttgat tttgacaaca taaagtattt tatagataaa acttgtcaaa
    10561 tactattaac tatttattaa ttttagtaca taaaaatgtt tctaagtatg tgtttatgtt
    10621 cagtattttg gataatttaa taattttaag gatattaagc gcttacaccg acgtgatata
    10681 tttggcttaa cgaaaatgat tgaggtgaca gagatgaact tttttgatat ccataagatt
    10741 ccgaacaaag gcattccatt atcggtacaa cgtaaattat ggcttagaaa ctttatgcaa
    10801 gctttctttg tagtgttctt tgtttatatg gctatgtatt taattcgaaa caactttaag
    10861 gcggcacaac cgtttttaaa agaggaaatt ggattatcta cattagaact tggttatatc
    10921 ggattagcat ttagtatcac gtacggttta gggaaaacat tacttggata ttttgtcgat
    10981 ggacgtaaca caaaacgtat tatctcgttc ttacttatct tatctgcgat tacagtttta
    11041 attatgggat ttgttttaag ttactttggt tctgtaatgg gattattaat tgtactttgg
    11101 ggacttaacg gggtgttcca atcagttggt ggacctgcaa gttattcaac gatttcaaga
    11161 tgggcgccaa gaacgaaacg tggccgatac ttaggatttt ggaatacatc acataatatc
    11221 ggtggtgcca ttgcaggtgg tgttgcactt tggggtgcta atgtattctt ccatggaaat
    11281 gttataggga tgttcatttt cccatcggtg attgcattac ttattggtat cgcaacatta
    11341 tttatcggaa aagatgatcc agaagaatta ggatggaatc gtgctgaaga aatttgggaa
    11401 gagccggtcg ataaagaaaa tattgattct caaggtatga cgaaatggga gatctttaaa
    11461 aaatatatcc tgggaaatcc tgttatatgg attctatgtg tttcaaacgt ctttgtatac
    11521 attgtacgaa tcggtattga taactgggca ccgttatatg tgtcagagca tttacacttt
    11581 agtaaaggcg atgcagttaa tacgatattc tactttgaaa ttggtgcatt agttgcaagt
    11641 ttattatggg gctacgtatc agacttatta aaaggtcgtc gtgcaattgt agctattggc
    11701 tgtatgttta tgattacatt tgttgtctta ttctacacaa atgctacaag tgtaatgatg
    11761 gttaacattt cattgtttgc attaggtgcg ttaatctttg gtccgcaatt attaattggt
    11821 gtatcattga ctggttttgt tcctaaaaat gccatcagtg tagcaaacgg aatgacaggt
    11881 tcattcgcgt atctattcgg tgactcaatg gcgaaagttg gtttggcggc tattgctgat
    11941 ccaacacgta acggtttaaa catctttgga tatacattaa gtggatggac agatgttttc
    12001 atcgtcttct atgttgcatt attcctaggc atgattctat taggaatcgt tgctttctat
    12061 gaagaaaaga aaattagaag tttaaaaatc taatatcaat cggattaaaa gtatcgccaa
    12121 tctattgcaa tatagttggc aatcctgccc cgacggcatg tgcgtgaaga gatgaaagat
    12181 actgcttcta cccttgcaaa tatatcatct ctatgtctcg gggcagatca taattccctg
    12241 ttatgaagta tccttatttg cccgacttag ggtgactcaa tgaatttact ccttacaata
    12301 aagacatata gcggtgtcga tattgtaggg agtattgttt tatatttaaa ctctctaaaa
    12361 agcggactga aagaaaagtg aaaacttctc tatcagtccg ctttttcata gaacaaaatg
    12421 taggcgccat aatcattagt tatttgctaa tctatttagc ttgcttacaa taatcacttg
    12481 gcgacatttg taaatatttt ttaaaatgat agctaaacat tttatactct gaaaagccta
    12541 ctttgtctgc aatttcatag tgtttgtaat gtcgatctaa caattgcaga gattgtaaaa
    12601 tacgatagcg atttaaataa tcgacaattg taataccaac atgatcttta aatgttcgca
    12661 tcgcatacga ttcactaaca tcgatatgtt gaattaaatc tgaaacagtc actttcgttt
    12721 gataagattg cttaatttga tcaacaatct gatttacata ataatcatcg tattctactt
    12781 ttaatagtgg ttggaaggca tcatgacaag atgctaagct acggccgttc tgtgattgtt
    12841 gctctaataa ggtacggaca agtcttccta aaataacttc taattgtgca tggtctactg
    12901 gttttaataa ataatcaaga acatgatgtt gaatgccggc tttcatatat tcaaagtcat
    12961 cgtaactcga taatatgatg acattacaat ctagatgcgc aatatcattg agtaaatcga
    13021 cgccattttt acgtggcata cgaatatcag taattactaa ttctggctga tgttgttgaa
    13081 ttagtgataa tgcttcaaca ccatctttag cagtgtatat tgtattgaaa tgatagtctc
    13141 cccaaggaat gatttgcttt aaaccttctc gaataattcg ttcatcatca caaataacta
    13201 ccttaaacat ctacattccc ccttgaaagt ggtattttat aacaaattaa cgtaccttga
    13261 ttacgctttg aaaaaatatg gagtcgtgca tgtgaaccat attgaatcat tgctttattg
    13321 tgtaaatgat ttaatcccaa atgcttagta tcaaatacat cattattaag agattggcgt
    13381 acatattgca ggcgagatga cgacatcccg ataccattgt cgcaaactaa aacatgtaag
    13441 ttctgacgtg ccaatgtcag gcgtatagta atgtccaatg actcagtatc tctaccatgt
    13501 ttaatagcat tttctatgag tggctgaagc atcattttac caattgtctg gtgacgcgct
    13561 tcttcagaac tttcgatatg gagcttaatc atgtcatcaa aacggatgtt ttgtatcgca
    13621 acatactgtt caatgtagtt caactcttcg tttaattcca ctgtatgtga gtttgtacgt
    13681 aatgagtaac gtaacatttg cgataattgt tggaccacag tttgtgctaa tttcggagat
    13741 aacgtaatta aatattgtat tgtttgcatc gtattgaata ggaaatgagg ttggaattgg
    13801 cgttctattt cctttaactg aatatcacgc aagcgacgtt ctgtatgctc gatagaatgg
    13861 atcagttgct catttgattc aaataaatcg taaatataat tattaatttc ttctagttca
    13921 ctgttgtttt ttaaaggcgt atatgtacct agatgacgat ttttggcata gtaaattttt
    13981 tgaataatcg tttcgatatc ttttgtttgt cgtttagcca tattatctgc gctaatgaaa
    14041 ccaaatatta ctagtaaaac aagaactacg gccataacaa ttaacaacgt gataccatct
    14101 tcaatgtttt catgtatatc tttataaata atgagacgat ggtcagcatg gtttaatttt
    14161 acagattcat tcataaatcc gaattgttgt ggtctatact tttcacctat agtaaaacgg
    14221 tcatcattgg cgtataaaat attgtcatat tgatcaacga taagtgcgaa ttgtcggcta
    14281 tctttcttaa tttcaattaa acgtggggtg ttagccatat aaattttaag catatatgta
    14341 ctatttttga atttaagctg atgcgttgaa aataaataca tatttttagt gtttaaatgt
    14401 tcataattat tggttataaa ctgatttggt ccagataatt cataataaag tgttgcgggc
    14461 tgttggtgta ttaattttaa taattcacgt tttgtagcgg taacatcatg atgatttgtt
    14521 aaatcgagct cttgaaacga attattatgc tgtgtaataa atgtctgaat ctgcttttca
    14581 gtgtgatgta aagatgactg actttcatca acatgttgat gaatcgtacg atgctctatc
    14641 caaatataga tggcatagaa gcttactagt ccaataataa ggactaaaaa tactggaaaa
    14701 atagtagacg caaataacga tcgtctcaat tgatgtctat aaggtttgta tgccgtcatt
    14761 gaatcatctc caaaaattta tgatgtggaa tgtccggtaa tttagatttc ggtattaaag
    14821 gtatgttctt aagattttcg atagactgat cgctttgttc actaacatcc tttcgaattg
    14881 acttggcatc gaactctgca actaatcgtt gttgtactga gcggcttgtt aaatattgca
    14941 ctaacttttt acgcttagga tgagggtgtg catttttaac taaagcaata ccatcgacat
    15001 ttaacattgt tccttcaata ggataaacga ttgatacagg ataacctttg tttttccatg
    15061 tgcgtgcatc ttgttcgtag cttagacctg cgtaatattt acctttagca acatcttcaa
    15121 tgactttaga cgtctttgac agttgcatcg catggtcttg gaattgatgc acatcactta
    15181 ctcgatgatg catgctataa atagcacgca tatgttgata gcctgtcgtt gttgtatttg
    15241 gatttgagta cgcaatttta cctttaagta taggttttaa taaatcttga taacctcgaa
    15301 tcgtaatatc tccttgtaaa tctgaattaa ctactataac tgttggcatt aatagaaaac
    15361 tagtaacata tttattgttc gagcgataat cctctaattg ctgtgttaca gatgtatctt
    15421 gatagggaac aaaatcttct ggatgatcaa ttgtttctga caacacacca cccataaaga
    15481 catcaccacg ctccgaaaga tcttcattat gcaagtttga aagcagtact tgagtagatc
    15541 catgtttgat ttcaattttg acatgctctt gtttttcaaa atcatttaaa attggacgaa
    15601 tcaagtttga ttgatacgga gaataaactg ttaatacatt tttatcggat tcagagtgac
    15661 gcgtattagc gcatgctgat aaaaaaatga gaaataatag caagatataa atttttgatt
    15721 tcatgatatc ccatcaattc tatgtatatt ttaatacaat aattttagca ataaatgacg
    15781 cataagtaat gttaaatatt tagaaatgtt tatagatgac ttgttaagac gttgcaaatg
    15841 ttgtgatagc aaaaaatttt tgtttgtcaa gacgatttac cgaggctgta aaatcaaact
    15901 gttatatttt atttgtagct gttatataaa aatcggcaag atattgaacg gttcaaaagt
    15961 gaatttttac gtcaataaaa gtatttaatc cagtctcttc atatataaaa gtaaatcttt
    16021 ctaagtgttg atttaacgct tatcaacaat cattttttat aaacaaatat atactcctaa
    16081 attaactttt aaagcaatga aaatagtgaa cattataact gttgtgtaac agaatgcaat
    16141 tagcatatta ctgttacaca aattagtaca gtttctatgt tttgacatac atttgatgaa
    16201 aattgtacat aatttatgtg aaaaaaatca caacaaacat gctacaatga ctatgaaaac
    16261 gttaacatag catttcaaat tcacaacatt atacagatgg aggcgtttag tatgttagaa
    16321 acaaataaaa atcatgcaac agcttggcaa ggatttaaaa atggaagatg gaacagacac
    16381 gtagatgtaa gagagtttat ccaattaaac tacactcttt atgaaggtaa tgattcattt
    16441 ttagcaggac caacagaagc aacttctaaa ctttgggaac aagtaatgca gttatcgaaa
    16501 gaagaacgtg aacgtggcgg catgtgggat atggacacga aagtagcttc aacaatcaca
    16561 tctcatgatg ctggttattt agacaaagat ttagaaacaa ttgtaggtgt acaaactgaa
    16621 aagccattca aacgttcaat gcaaccattc ggtggtattc gtatggcgaa agcagcttgt
    16681 gaagcttacg gttacgaatt agacgaagaa actgaaaaaa tctttacaga ttatcgtaaa
    16741 acacataacc aaggtgtatt cgatgcatat tctagagaaa tgttgaactg ccgtaaagca
    16801 ggtgtaatca ctggtttacc tgatgcatac ggacgtggac gtattatcgg tgactatcgt
    16861 cgtgtagctt tatatggtgt agatttctta atggaagaaa aaatgcacga cttcaacacg
    16921 atgtctacag aaatgtcaga agatgtaatt cgtttacgtg aagaattatc agaacaatat
    16981 cgtgcattaa aagaattaaa agaacttgga caaaaatatg gtttcgattt aagccgtcca
    17041 gcagaaaact tcaaagaagc agttcaatgg ttatacttag cataccttgc tgcaattaaa
    17101 gaacaaaacg gtgcagcaat gagtttaggt cgtacatcaa cattcttaga tatctatgct
    17161 gaacgtgacc ttaaagcagg cgttattact gaaagcgaag ttcaagaaat tattgaccac
    17221 ttcatcatga aattacgtat tgttaaattt gctcgtacac ctgattacaa tgaattattc
    17281 tctggagacc caacttgggt aactgaatct atcggtggtg taggtattga cggacgtcca
    17341 cttgttacga aaaactcatt ccgtttctta cactcattag ataacttagg tccagcacca
    17401 gaaccaaact taacagtatt atggtcagta cgtttacctg acaacttcaa aacatactgt
    17461 gcaaaaatga gtattaaaac aagttctatc caatatgaaa atgatgacat tatgcgtgaa
    17521 agctatggcg atgactatgg tatcgcatgt tgtgtatcag cgatgacaat tggtaaacaa
    17581 atgcaattct tcggtgcacg tgcgaactta gctaaaacat tactttacgc tatcaatggt
    17641 ggtaaagatg aaaaatctgg tgcacaagtt ggtccaaact tcgaaggtat taacagcgaa
    17701 gtattagaat atgacgaagt attcaagaaa tttgatcaaa tgatggattg gctagcaggt
    17761 gtttacatta actcattaaa tgttattcac tacatgcacg ataaatacag ctatgaacgt
    17821 attgaaatgg cattacatga tacagaaatt gtacgtacaa tggcaacagg tatcgctggt
    17881 ttatcagtag cagctgactc attatctgca attaaatatg cacaagttaa accaattcgt
    17941 aacgaagaag gtcttgtagt agactttgaa atcgaaggcg acttccctaa atacggtaac
    18001 aatgacgacc gtgtagatga tatcgcagtt gatttagtag aacgctttat gactaaatta
    18061 cgtagtcata aaacatatcg tgattcagaa catacaatga gtgtattaac aattacttca
    18121 aacgttgtat acggtaagaa aactggtaac acaccagacg gacgtaaagc tggcgaacca
    18181 tttgcaccag gtgcaaaccc aatgcatggc cgtgaccaaa aaggtgcatt atcttcatta
    18241 agttctgtag ctaagatccc ttacgattgc tgtaaagatg gtatttcaaa tacattcagt
    18301 atcgtaccaa aatcattagg taaagaacca gaagatcaaa accgtaactt aactagtatg
    18361 ttagatggtt acgcaatgca atgtggtcac cacttaaata ttaacgtatt taaccgtgaa
    18421 acattaatag atgcaatgga acatccagaa gaatatccac agttaacaat ccgtgtatct
    18481 ggttacgctg ttaacttcat taaattaaca cgtgaacaac aattagatgt aatttctcgt
    18541 acattccatg aaagtatgta acaaaattta aggtgggagc actatgctta agggacactt
    18601 acattctgtc gaaagtttag gtactgtcga tggaccggga ttaagatata tattatttac
    18661 acaaggatgc ttacttagat gcttgtattg ccacaatcca gatacttgga aaattagtga
    18721 gccatcaaga gaagtcacag ttgatgaaat ggtgaatgaa atattaccat acaaaccata
    18781 ctttgatgca tcgggtggcg gtgtaacagt cagtggtggc gaaccattgt tacaaatgcc
    18841 attcttagaa aaattatttg cagaattaaa agaaaatggt gtgcacactt gcttagacac
    18901 atcggctgga tgtgctaatg atacaaaagc atttcaaagg cattttgaag aattacaaaa
    18961 acatacagac ttgatattat tagatataaa acatattgat aatgacaaac atattagatt
    19021 gacgggaaag cctaatacac acatccttaa cttcgcgcgc aaactgtcag atatgaaaca
    19081 acctgtatgg attcgacatg tccttgtgcc tggttattct gatgataaag acgatttaat
    19141 taaactaggg gaatttatta attctcttga taacgtcgaa aagtttgaaa ttctgccata
    19201 tcatcagtta ggtgttcata agtggaaaac attgggcatt gcatatgaat tagaagatgt
    19261 cgaagcgccc gatgatgaag ctgttaaagc agcctaccgt tatgttaact tcaaagggaa
    19321 aattcccgtt gaattataaa tacaattcag accgaaaaga aagcatatgt aacttcaaga
    19381 gtgaaggggc atatgcttct ttttcaattg agtatagagt aatagcaaga cgtagtaggt
    19441 atatgagaca acttctacaa tggttgaagg aagacatttt tgtaagtagc tatgctgata
    19501 aagaatgtga agccttgtta aaggtggggt tccaatatca tcatttagct gatgttgaat
    19561 gggttattat ttgctacttg catatgaata tgagtctttt caaattttta ttgaccctga
    19621 gtaatgaaaa atattaagat gaaacttaat attaaagcaa tgcggagcgt gattatgaag
    19681 agaattagta aagatatatg ggcagtattt aaattactgt atcaaaataa agggcgtttt
    19741 agcattaacg ccttactatt gcagttaatc atgattttta ttagtagtac atacttaatt
    19801 ttactattta atatgatgtt aaaagtagct gggcaaagcc aacttacgat taacaattgg
    19861 atggaaatcg taagtcaccc tgccagtgtg atacttctta ttatattcat attaagtgtt
    19921 gcctttctga tttatgtaga gttttcattg ttagtttata tggtttatgc cggctttgat
    19981 cgacagatta ttacatttaa atccattttt aaaaatgcct ttgtaaatgt gcgtaaactc
    20041 ataggtgtac cagttatttt ctttgtcatt tatttaatgt taatgatacc cattgctaac
    20101 ctaggactaa gttcagtatt aacaaaaaat atttacatac ctaaattttt aacggaagaa
    20161 cttatgaaaa cgacaaaagg tataatcatt tacggtacct ttatgattgc tgtatttata
    20221 ttaaacttta aattaatatt tactctaccg ttaacgattt taaaccgcca gtcgttattt
    20281 aaaaatatga gactaagttg gcaaattacg aagcgaaata agtttcgact tgttatagaa
    20341 atagttatat tggaactcat cattggtgcg attttaacat taattatttc aggagcaaca
    20401 tatcttgcta tttgtgtaga tgaagaagga gataagtttt tagtctcatc aattttattt
    20461 gttgtattga aaagcgcatt gttcttctat tatttattta cgaaattatc attaatcagt
    20521 gtgttagtac tgcacttaaa acaagagaat gtattagacc aaccgggctt agaatttaaa
    20581 tacccaaaac cgaaacggaa atctaggttc tttataattt caatggtgct tgcagtgaca
    20641 tgttttatcg gttataacat gtacttactt tacaataata ctatcaatac aaatatatcc
    20701 attattggcc atcgtggttt cgaagataaa ggcgttgaaa attctattcc gtcattgaaa
    20761 gctgctgcaa aagcgaatgt cgaatatatt gagttagata caattatgac gaaagataaa
    20821 caatttgttg ttagtcatga taacaatttg aaacgtttaa caggtgttaa taaaaacatt
    20881 tctgaatcta atttcaaaga tgtcgtcggt ttgaaaatgc gtcaaaatgg acatgaagca
    20941 aaactggtat ccttagacga atttattgaa acggctaaac aatcaaatgt gaagctacta
    21001 gtagagttaa agccacatgg taaagaacca gcagattata cacaacgtgt tattgatatt
    21061 ttgaaaaagc atggtgttga acatcaatat cgtgtgatgt cattggatta tgatgtgatg
    21121 actaagttaa aaaaagaagc gccatatctc aagtgtggtt atatcatccc gttacagttt
    21181 ggtcatttta aagaaacatc attagatttc tttgtcatcg aagatttttc ttattcgcca
    21241 agacttgtta atcaagcaca catggaaaat aaagaagtct atacttggac cattaacggc
    21301 gaagaagatt taacgaaata cttacaaacc aatgttgatg gtattatcac agatgaccca
    21361 gcattagctg atcagattaa agaagaaaag aaagacgaaa catacttcga tcgttctata
    21421 agaattttgt ttgaataata taaacaaaga cctctaaagt tatcaagatg ataccttcag
    21481 aggtcttttt aacattgtca cctatgggat aggcaatcgt ttcattcgtt tataatcata
    21541 tgacaaggat ttataaggaa atttggcgtc acaaacactt acatgattta ttggtgaatt
    21601 attaattttt ttgtgaatgc aaagggttag aaattgaatc gtaaatactt tctaatctat
    21661 gtttcgcttt agtcatttga tccaaatttt tagtgcgtat agctgatttt gcaatatagt
    21721 gcgcagctaa aatatcgcgt ttttgaaacg catctaaatt taggtacgat aatttattta
    21781 agtcagtgtt tgctattaat tcatataatt gatctacaag cgcttgatgt tgatacgtat
    21841 gtgatgtagt ttcagatttg cttgctaatt taataccagt cgtatcaagg agcgccgctt
    21901 taataccagc aactaaatat gttttgattt tcatttgtgt tgtcatgctt tgttactcct
    21961 ttgatgtaca ttaatcaaaa aaattataca ctattgtata ttgcaaagct aattaactat
    22021 aacaaaaaga tagttaatgc tttgtttatt ctagttaata tatagttaat gtcttttaat
    22081 attttgtttc tttaatgtag attgggcaat tacattttgg aggaattaaa aaattatgaa
    22141 aaagcaaata atttcgctag gcgcattagc agttgcatct agcttattta catgggataa
    22201 caaagcagat gcgatagtaa caaaggatta taatgggaaa tcacaagtta aaaaagagag
    22261 taaaaatggg acattaatag atagcagata ttattgggaa aaaatagaag ctctagaaaa
    22321 gcagttttca agtgcattgg cattaacaga tgagtatcaa tatggtggta atgaatataa
    22381 agaggcaaaa gataaattaa tggaaaggat attaggagaa gatcaatatt tattaaagaa
    22441 aaaaatagat gaatacgatt attataaaaa atggtataaa gcaacttacc caaacgataa
    22501 ttcaaaaatg tattcatttc ataagtataa tgtttactat ttaacaatga atgaatataa
    22561 tgaaatcaca aattcattaa aagacgctgt ggaaaaattt aataatgaag taagagatat
    22621 tcaatctaaa aatgaagact taaagcctta tgacgaaaat actgaaaaac aagaaactga
    22681 taaaatatat gaatttgtta gtgaaataga tacagttttt gcagcgtatt atagtcatga
    22741 aaaatttggt atacatgcta aagaattacg agcaaaatta gacataatac taggtgacgt
    22801 gcataacccg aatagaatca ctaatgaacg tataaaaaaa gaaatgatgg aagacttaaa
    22861 ttcaatagtc gatgatttct ttatggaaac aaatcagaat agacctacaa caataaagaa
    22921 atatgacccc aatattcatg attatacaaa gaaaaaagag aataaagaaa attttgataa
    22981 gttagttaaa gaaacaagag aagcagttga aaaagcagac gaatcttgga aaaataaaac
    23041 tgtcaaaaaa tacgaggaaa ctgtaacaaa atctcctttt gtaaaagaag agaagaaagt
    23101 tgaagaacct caattaccta aagttgggaa ccagcaagag gttaaaacta cggctggtaa
    23161 agctgaagaa acaacacaac cattagttaa aattccacag ggcacaatta caggtgaaat
    23221 tgtaaaaggt ccagactatc caactatgga aaataaaacg ttacaaggtg aaatcgttca
    23281 aggtccagat ttcccaacaa tggaacaaaa cagaccatct ttaagcgata attatactca
    23341 accgacgaca acgaacccta ttttagaagg tcttgaaggt agctcatcta aacttgaaat
    23401 aaaaccacaa ggtactgaat caacgttaca aggtactcaa ggagaatcaa gtgatattga
    23461 agttaaacct caagcaactg aaacaacaga agcttctcaa tatggtccga gaccgcaatt
    23521 taacaaaaca cctaaatatg ttaaatatag agatgctggt acaggtatcc gtgaatacaa
    23581 cgatggaaca tttggatatg aagcgagacc aagattcaat aagccatcag aaacaaacgc
    23641 atacaacgta acgacaaatc aagatggcac agtaacatat ggcgctcgtc caacacaaaa
    23701 caagccaagc aaaacaaacg catataacgt aacaacacat gcaaacggtc aagtatcata
    23761 cggagctcgt ccgacataca agaagccaag cgaaacgaat gcatataacg taacaacaca
    23821 tgcaaacggt caagtatcat atggcgctcg tccgacacaa aacaaggcaa gcgaaacaaa
    23881 tgcatacaac gtaacaacac atgcaaatgg tcaagtatca tatggcgctc gtccgacaca
    23941 aaacaagcca agcaaaacaa acgcatataa cgtaacaaca cacggaaatg gccaagtatc
    24001 atacggagct cgcccgacat acaagaagcc aagcgaaaca aatgcataca atgtaacaac
    24061 acatgcagat ggtactgcga catatgggcc tagagtaaca aaataagttt gtaactctat
    24121 ccaaagatat acagtcaata caaaacatta cgtatcttta caacagtaat catgcattct
    24181 atgatgcttc taactgaatt aaagcatcga acaatcggaa gcatatttct aaattattta
    24241 ttcattatag tcttaaacat aacatgacct aatatattac taacctatta aaataaacca
    24301 cgcacatcta agtgatatac gacaatcaca gcaataataa ttgctttaga aagtcgtacc
    24361 gaactggaac ttacaagtct agttcgaaca cacactgatg tgagtggttt tctttatttt
    24421 aaacatgaac aatcagataa gttactagca ttagcaaata ttattaaatc aaagggcttc
    24481 gattcataaa atttaaaaca atgattaaaa ttagacgtgt aaatgttaaa ttctaaaacg
    24541 gaaataccca ccatcccatt aaaccacttt tttgttcaat cactatgttt cacatagctt
    24601 cattaataaa acgaaattgc ttcaacccgc ttcaacttca acctgcttca acttcagcct
    24661 acttcattta ataacaaaac gaatccgctt catccaaaat caaccattct aacgcacata
    24721 ctcaaatata gcagctgcac ccataccgac accaatacac atcgtaacca tgccgtaacg
    24781 gctatcggga cgtctaccca tttcattaag taaacgcgcg gttaacattg cgcctgtagc
    24841 acctaatgga tgacctaaag caatagcgcc accattcaca ttcgtacgtg atatatctag
    24901 acctacttct ttaatagatg caatcgtttg agaagcaaat gcttcgttca attcgatcaa
    24961 atcaatatct tcaacagata gattgctgag tgacaatact tcaggaatcg catatgcagg
    25021 cccaataccc ataattttcg ggtcaacgcc tactgcctta taaccaacga atcgtgcaat
    25081 aggtgtcacg ccgagttctt tcactttatc tccagacatt aaaactacaa atcctgcacc
    25141 atcagaaagt ggggcagatg ttcccgcagt cacagtgccg tcagctttaa atactgtacg
    25201 taatttggct aatgcctcca tcgtggtgtc aggtcgtata aattcatctt ggtcaaagat
    25261 atttgtgtgt acttttggtc ctgcgtttgt atattcaact gagtttactt gtattggaat
    25321 aatttcattt ttgaaccgac catcacgttg tgcgtcatag gcacgttgat gacttctgac
    25381 agcataagca tcttgatctt cgcgtgatac gtcaaattgg gatgctacat tttcagcagt
    25441 taaacccata ggatatgacg cacctatatc atcatattgt aaggtgggat tgtttgtggg
    25501 ctcgttgcca cccattggta cggcactcat caattcaacg ccaccagcta caagtatatc
    25561 tccttgacca gccataattt gattggctgc aatcgcgatg gtttgtaatc ctgatgagca
    25621 gtagcgattc actgtttgac ccggtaccgt gtcagataat cccgtacgca atgcaatcgt
    25681 tcgtgcaatg ttttgtcctt gtaatccttc tggaaaagcc gtaccaacaa tgacatcttc
    25741 aatcatattc ttattgaatt ttccgtcaat acgtttcaat acgccttgta atactttggc
    25801 tgcgacatca tcaggtcttt cgtggaataa tgcgccttgc tttgctttcg ctgcggctga
    25861 acgcccataa gctacaatgt atgcttcttg catggttatc atcctctctt aatgactatc
    25921 ttttaattac gtaatggctt accagttttt aacatatgtg caattctttc atatgatttt
    25981 ttagatttta gtaagtcaat aaagccaatt ttctccaacg attgaatgta acgttgattg
    26041 ataaatgtat ttcttggtaa atcaccaccc gctaaaattg tggcaatatt taaggcgata
    26101 tgataatcat ggtcgctaat aaaatgaccc cgtctttgcg catctaattg tccttggata
    26161 aatgctttga agtcttcacc taaagcgata tattgatgtc taggattcgg aatatagttt
    26221 gtttctgctt catatttcgc acgtttgagc gcaacttcga cacgttgtgc tgtattgaaa
    26281 ataatcgtat ctgtatcacg taaataacca taacgacgtg cctcaaaggc atttgtagag
    26341 actttcgcaa atgcgatatt cgtcagtact tttgtcatgg aagcttgttt gtcatcaaac
    26401 ttatgcgatg tgcgtaatat gcgatcagcc atttctgcaa ggccaccgcc actcggtaat
    26461 aagccaacgc ctgcttcaac aagaccgata tacgtttcac ttgcagcgac aacaataggt
    26521 gagtaaagta caagctcaca gccaccgcct aaggcacgac cttgaacagc tgtgactact
    26581 ggtttcaaac tatacttcaa acgattaaag ctataatgta atttatcaat tgattgtgca
    26641 acgacatcat ctacaagacc gtcttcatgc gcctttttca ttaagaaaag gttagcaccc
    26701 acactgaaat tgttaccatc tgcataaata accatacttg tgtaatggtc attttccagt
    26761 aaatcaatcg catcaactaa cgcatcgttg aattcatcgg taatgacatt atttttactt
    26821 tgtaatttca gtaacagttg atcatcatga gttacggaaa gtttggcatc acctttatcc
    26881 caaagttcat cttttacgaa gtgagaaaca ggtgttgcat attcgatggt ctcatctttt
    26941 ttataaaagc caccatctaa atcactaatc cattgtggta agtctccaaa ttcgtcttcc
    27001 atacgttttt taacacgttc atatcccatt gcatcccata attggaatgg accaagtttc
    27061 cagttgaacc cccagacaag cgcacggtct atgtctcgga aatcatcggt agctttaggt
    27121 acattgatag cagagtaata gaaattatta cgtaatgtct cccataaaaa tagtcccgct
    27181 tcgtcttgcg cattgaatat gacatcaagg ttatgcgcta agtctttatt aaattcattt
    27241 aaaattggta attgtggttg cgatacaggt acataatctt gtttttcaac atcgtaaaca
    27301 agtcgagctt tagtttcttt atcctttttg taaaatcctt gtttcgtttt acgtccgagt
    27361 gcgccattgt caaacaacgt atttacaatt ttgacatcat gaaaataagg tgtttcttca
    27421 ggtacttgtt gcatgccttt aattacagac actgcaatat ctaaaccgac taggtcagat
    27481 agcgcatatg tacctgtttt aggacgacca atcgcttgtc cagttaaagc atccacatct
    27541 acaatgctta acttgtgttg ctcggcgcga tacataatat cattcattgt ttgcgtgccg
    27601 actctatttg cgacaaagcc aggtacatca ttgacgacaa tgacaccttt acctaacaca
    27661 ttttgcgcga aattttttac atctaatatg atagattcct tcgtgtgtga cgtaggtatt
    27721 aactccacta atttcataat acgtggtggg ttaaagaaat gtagaccaaa gaatcgttct
    27781 tgatccttct cgttaaatac ttgagcaatc gcattaattg gaatacctga tgtatttgta
    27841 gcgaataaag catcttcttt agcatgttgt agaacttgtt gccaaacagc atgcttaatt
    27901 tcaatatctt ctttgactgc ttcgatatat aaatcagcat catcatttac caagtcatca
    27961 tcaaaattac catatgttaa atgactcgct agatttaagt cgaatagtag cggccgtttc
    28021 ttatctgtaa ttttatcgta agattttttc gcaatgagat ttggatcgtt tttgtctact
    28081 acaatatcta atagttttac tttaagtcca gcattcacaa agagtgctgc cagttgagcg
    28141 cccattgtgc ctgcgccaag aacggttact ttattaattg tcatagtgat tcctccaatt
    28201 tagttgagga taagataacc attaagataa ttggaataac gttgctattt tataaaatta
    28261 attaggtatc tttgacagtc atcttagcct cttatttaag gaaaaagctt tatgcttaaa
    28321 ataagtctgt ttttagtgaa attactgtat cttatataat tctttgctat ttatacgaaa
    28381 gcagaatctc cagtcaaagc gcgtccaatt actaaggcat taatttcatg tgtaccttcg
    28441 tacgtgtaaa tcgcttctgc atcagagaag aaacgtgcaa tatcataatc gtcagctagt
    28501 atgccattac cacctgtaat accgcggccc atagctactg tctcacgcaa acgtaaggca
    28561 ttcatcatct tcgccgttga agttgcaacc tcgtcatatt caccatgtgc ttgcatatta
    28621 gctaattgag cacatgttgc cattgcttga gctaaattac cttgcatcat tgctagcttt
    28681 tcttgtatta actgatattt actaattggt ttgccgaatt gcttacgctc agtgacataa
    28741 tctaatgtgg cacgtaaagc gccagccata ccacctgtag ccatataagc aacgcctgct
    28801 ctcgttgaat aaagaatttt ggcaatatct ttaaagcttg ttatgttttg taagcgatcc
    28861 gcttcatcta ctttgacatt agttaattta attagtgcgt taggaacaat gcgaagtgcg
    28921 attttattat caatgacttc aatatcgacg ccatcttgtt ctggtctgac tacaaagcaa
    28981 tggggtttgc cagtttcttt atttactgcg aatactggaa tgacatcaga tacatgtgca
    29041 ccaccaatcc atttcttttc accattgata acccaagtat cgccctggcg ttcagcgact
    29101 gtttcaagac ctcccgcaac gtccgaaccg tgttctggtt cagttaaagc aaagcatgta
    29161 cgcagttcat gtgactgtaa tttaggtaca tatttcgcaa tttgttcttt gctacctccg
    29221 aaatagaaag tgttatgccc taaaccttgg tgaacaccga gtagggtagc taaggaaata
    29281 tcaaatcgcg cgagtaggta agacatgaaa aactgaaata gttgactagg cattttggcg
    29341 tttggacgat ccttgtaaag taatggattg ttaaaataat ttaattctcc cagattttta
    29401 aaaaagtcct cgggtacagt agcgtctatc caatgttgat taatattttc acggtactta
    29461 ctttctagca atgaatctac ttgttgtaaa aattcgactt caccgtctgt taaaccttta
    29521 gcaatactaa gtacatcttc aggaaataat gtttttaaga ctgtttcttt ttcaaatgtc
    29581 atataaattc ctcctaaaaa taatatgaat actaatgtga aatgcattta attcaaaaac
    29641 aacacgcttt atttgtaaac gcttacacta aatactaaaa atttttatca cctttaaagt
    29701 gtttgtgaga ctttgtcatt catcatttgt cgaatcgcaa gtttatctgg tttctgcgta
    29761 ctgtttaacg gcatatgtgt cactggtaca tacattcttg ggactttata acctgctaaa
    29821 cgacttcgca tatgttgatc taaaatttca gcgtaatgag gttcatcttc gcgaagtata
    29881 atggctgcag caattgattc accatatttt gggtgatcat agccaacgac cacacaccgg
    29941 tctactagtg gatgctcagc taaagcattt tcgacttcgg atggtaagac attttcgcca
    30001 ccagttatga ttaattcttt tttgcggtca ataataaata tatcgccatc gtcgtccatc
    30061 ttcgctaagt caccagttaa taaataacga ccatgaaatg ctttggcagt ctctgctggt
    30121 ttattccaat atcctggcgt gacattttta gccttaattg caagttcgcc aatctcacca
    30181 gtaggtactt cctcaccgtt atcatcaagg atacgtgcat caacgaacat gactgcttta
    30241 ccaatactca ttggcttacg ttttgaattt tccggtgtat taacaagtac aagaggtgct
    30301 tcagttaaac catagccgtt aataatgttt atgccatatt gtttaaaagc tgcttggata
    30361 cttggtaatg gttgtgaacc accttggatg atataatcca tagctttaaa attttcagga
    30421 ttaaaattac tagcacgtag cgtactataa tacattgtcg gaatcatgat aataaatgta
    30481 gggtgatatt gtgcaatcat gtcattcaat tcttcgccgt taaagtaacg ttgaagaata
    30541 agtgtgccac ctgacattaa tactggtaat acagtatcgt taaaccctaa aacatggaac
    30601 attggtgttg atacaatcgt aatatagttt gaattgaact tatacgtcag ctctaagttt
    30661 gcgccgttat gaacaaatga ttcatatgag aacatcacac ctttaggtga tccggttgta
    30721 ccacttgtat aaattaatgc tgcaagatct tgtggttcaa caggtgttgc ttgaaaaggt
    30781 tggtgataat ctggatttac gatttcatca tattgcgcta catcaatatc catatgcaat
    30841 aagttttggt caatatcggt gagtgaactt aaatgttttt cagcatagaa gagcagtttt
    30901 aattgtgcat cttccacaat ggctgcaatt tcttttgggt taagccgcca attcaatggt
    30961 aaaaaaaccg cacctgtttt aaaacaagca aatagtaaat ctaatattgc aatatcattt
    31021 ggcgcaaaaa taccgataac atcgcctttt ttaacacctt gagatgttaa ataatgtgcc
    31081 atattatcag cgcgtgcatt gagttgttgg tatgtccaag atgtttgttt tgcgtgatca
    31141 ataacggcag gcttgtcatc atcgaagtct gaacgtgttt ttatccaatc gaaattcatt
    31201 agtatacccc ctttagcttc actttcatac tttatgaatt gattgtttaa gttgtcccca
    31261 tttttctttg taaatgctgg tatcaattaa ttttaaatga tcagcaataa ttggtttaaa
    31321 agccatttga ttcaaaatat ctttatgcaa atcaagacct ggagcaattt caattagttt
    31381 caagccttga ttggtgagct cgaatactgc acgatcagta acaaaataga cttcttgctc
    31441 gagtgattgt gaatattgtg cattaaagtc gatatggctc acatctgata caaatttctg
    31501 gttttgtcct tcagtttcaa tgtttaatcg ttgattatga catgagacat gactaccggc
    31561 tacaaaagta cctgaaaaga taattttatt tacagattgc gtaatgtcta taaagccgcc
    31621 acatccattt agtcggtcat tgaagtatga cacgttgaca ttgccgtgtt gatcaacttc
    31681 agcaaagcta agataggcaa ctgatacacc attgttataa ataaaatccc atgctcgatc
    31741 atgaggcatg cgcacatctg cattgtaatt cataccaaaa tgttcacgac tcccaacgaa
    31801 tccaccgaaa atgccaacat ctaaaatcgg ttgcacatca tgttcaacac attcttcatg
    31861 caataaatta gagagttcat tattgatgcc ataaccgatg ctaattgtat cgccataagt
    31921 taaaaactga gcagcacgtc ggagaatcaa tttgcgacta ttaaaaggta atgcgggttc
    31981 aggtattcca tcaattcgtt cttctccaga caaggctggt aaataatgac tctgaattac
    32041 ttgacggtga ttcttttcat cttctgtgac gtatacataa tcgacaagat ttcctgggat
    32101 aacaacttca ttcggcttta gttgatagtc gtcaactaaa gctttaactt gtacaataac
    32161 tttcccatga ttggctttcg tgtttaatgc gacatgataa cactcgctca agtacgcttc
    32221 ttgagttaaa taaatgttac cttgttgatc tgcgtatgtt cctctcagta gtgccacatc
    32281 aacgctaggg aatgtgtagt gtaagtatgt ttcatcgttg atggttacta atgaaactaa
    32341 atcatcagtt gttcgtgtat ttactttacc gccaccgtat ctaggatcaa cagctgtgtt
    32401 taatccgatt ttagtaataa ctccaggtaa taattgatta ctctgacgat aatgagttgc
    32461 aatgatacct tgtggtaaaa aataagcttc aatgtcatta tttttcattg cttgtgccgt
    32521 tttggaagaa gccgttaaaa tactcataat gacacgttta atcatgcgac gttctataaa
    32581 atcatctaaa tccggtgcgg cacctaaact atggatatca ttcgctaata taaacgttaa
    32641 atcattgggc gtatgatatg tgtcatgttg cgctaacaca gcacgtagaa cttcggcggg
    32701 taagttggct acagctaatg ctggtaaacc aatcacatca ccatctttaa tgatatgttg
    32761 taagtcgtgc catgtgattt gtttcaagca agtcacctcc atcacatttg ataaaatata
    32821 gcgtttttac actttgtgta aacccttaca agaaatataa cataacgaca tttaaaatca
    32881 attagaaata tctttttatt ctgataatag acacagtata gacacatttt gatggttgat
    32941 aacaattgta atatcaaggg tttgtaatga attgaatatc attaaaatac ttatataaaa
    33001 atattgctcg gaatataaaa aacaacccat atttatttaa aaaatgcaaa gactaattat
    33061 cattttgatg catcagtaag gtgaggatga tcagcgtaca atcagtggtg tataatgtaa
    33121 ctgatgaaat cattggagag ttgaaggaga tgttgaacat atgagagtca atgttttaca
    33181 acatacacca aatgaaggtg ttggatacat aggtgagtgg gcgaaggaaa gcgggcacga
    33241 agtctatatt tatcacccat atatgaatga tggcgtgcta cctcttgcgg aagaaacaga
    33301 tatgttagtg atacttggtg ggccaatgaa tccagacgat gagatgcctt ggattcaatc
    33361 agagcgcgaa ttaattttag tattgatggc acaaaacaaa ccaatttatg gtgcttgctt
    33421 tggtgcacaa caaatttcga aagcattagg ttatgcggtg ttaaaatcac cagtaaagga
    33481 agtaggttgg gatgatgttt acttagaatc agaaatcatt ccgaatatac caagtcgatt
    33541 gaaggcacta cattggcatg aggatatgtt tcaaataccg caacaagcag aattattatt
    33601 ttcagggaat catattagaa accaaggatt tatcatcgat catcatgtga ttggattaca
    33661 atttcatttt gagcctggtc cagacgatgt cagagaaata gtactaaatg atgcccaata
    33721 catcaatcat tctattttag agcaatcggc ggaggacata ttagcctttg aggtgcctaa
    33781 acagaatagg caggccattt tccgaatact tgattttatt actcaagcgt aagatgtgag
    33841 ttgtatttta aaatgagtaa aaaaacgaat gtacacaatc gaacaaagta gttatataaa
    33901 tatatggaaa atccatcaat attaaattaa aatagtttta ttatgaaaag tgaaagtagg
    33961 taagtctatg gaaggtctta atcatcgaag aaatacagaa aaagaagaga caacacaaac
    34021 gcaatcagtt gcacctaata caggtgaaga ggggatgtca tcagcaagta cacaatcaac
    34081 taagacgtcc gacatacata atgaatctat cgataaacaa atggaagcca aagcgcatga
    34141 aacagcgcaa aatacagatt taaaaaacga agcaagaagt ttatttgata atgcaaccaa
    34201 atcaatcggt agactagccg gcaatgatga aagcttaaat cttaatttaa aagatatgtt
    34261 ttcagaagta tttaagccac atactaaaaa cgaagcagat gaaatattta tagcgggtac
    34321 tgctaaaact acgccagcaa tttgtgacat atcagaagaa tgggggaagc catggctctt
    34381 ttctcgagta ttcatcgctt tcacagtaac atttattgga ttatgggtca tggcagcgat
    34441 ttttaataac actaacgcga ttccgggtct catttttatt ggggctttaa cagtaccatt
    34501 atcgggtttg ttcttctttt atgaatcaaa tgcgtttaaa aatattagca tttttgaagt
    34561 tattatcatg ttctttattg gcggagtatt ttcattacta agtacgatgg tattatatag
    34621 atttgtcgtt tttagtgatc aattcgaaag gtttggttct ttaacatttt tcgatgcatt
    34681 tttagtagga ttagttgaag aaactggaaa agcactcatt attgtttatt tcgtcaataa
    34741 attgaaaaca aataagattt tgaatggatt attaatcggt gctgctattg gtgcagggtt
    34801 cgcagttttt gaatcagcag gttatatttt gaatttcgct ttaggggaaa atgtcccatt
    34861 attagatatt gtcttcacac gtgcgtggac tgcgattggt ggccatttag tttggtcagc
    34921 gattgttggt gctgcaatag ttattgcgaa agaacagcat ggctttgaat tcaaagatat
    34981 ttttgataaa cgctttttaa tattcttttt atcagccgtt ggtttacatg gcatttggga
    35041 tacatcttta actgtacttg gcagtgatac gttgaaaata tttattttaa tcgttattgt
    35101 gtggatactt gtattcattt taatgggggc aggtttaaaa caagttaatt tactgcagaa
    35161 agaatttaaa gaacaacaga aaaaagtaga cgaataataa ttaaagctta tgttgctcat
    35221 atgtttgtga cataagctat ttttataatt tgtctctaaa agagtggaag tggaatactt
    35281 tttggagtta aaaagtgttt cacgttaaac aaatagtgac aattagattt atataaaatg
    35341 aacatgattc actaaaaata tgtaataatc attttattga aattcatcaa acagaaagta
    35401 atacaatcat ataagcaaat taaaccacgc cataatcata ttgaatgacc tcggcgtggt
    35461 ttttatagtt gaagcggggc tgagacataa atcaatgtcc cacactccct tatcgttcaa
    35521 tcgttgttcg ataatcgatt aaatagatac cttcaggtgt tactttataa tttttaacct
    35581 tagagttagc agcgactatt tgatcgttgt aagcaatata actgtttggt acatctcgac
    35641 ttgataattt aataatatca ttagaaatat tgtgacgttc cttaatatct acagtatgat
    35701 tcaattgatt aattaaatca tcaacgttgc tattattgta gtctccttta ttaatagcac
    35761 catctttttt atatgcttga ttaaagaaat agcctgtatc tccacgagga atcgttccga
    35821 aactatacat cgttgcatcc caggcagaac ggtcttttaa gtaaccttct atgtcatcaa
    35881 cacttttaat gtcgatttca atattagctt ttttagcatc tgattgtaat acttgcgcaa
    35941 ttttcgatag ctctggacga ccgtcatacg taattaactt aatttttaaa gggtgttctt
    36001 ttgtataacc atctttagct aataacgctt ttgcttgttc gatattttgt ttggttaact
    36061 taggttcttt aatatatgga attttatcat taaatggact cgttgcaggt ttcgcgtaac
    36121 cttgataaat atgatctgca ataccttgtc tatcaatgat atgatctaat gcttcacgaa
    36181 cggatttagt cattttttta ttagtatgat tatacataag taaagaagtt ctaaatccag
    36241 attcttttga cacttttaaa ttttgattat tttctatgtc ttgaacttta ttaactggga
    36301 catcagttat taaatcatct ttttgagatt ctaaatttct gacgcgatta ttgccgtctt
    36361 cttggtacgt cacagtaata tgatcaagtt tcggtttacc ttgccaatag tccttaaaat
    36421 tcgacaatga tatttttcga gattgcttat aatcttttat ttggtaaggg cctgtaccaa
    36481 caggagtttg attaacatct gatttagcat ctgtatcata aattgccata aaaggattag
    36541 ctaattcaga tacaagttca gggtaagcgt agttggtttt aattgtcagt ttttgacctt
    36601 tagcggtaat tgatgatatt ggtaatgaat atttgaccaa gtcgcttttt ttcatgctat
    36661 tttcaaggct agatttcact ttttctgcag tcaatttttg accgttttga aatttaatat
    36721 tatcttttaa ttctatatct aacgttttat catttggttg atgatacgat ttcactaata
    36781 ctttttctat ttttccttga tcatttgttt taaataatga ttctgcagca ccaatcttaa
    36841 ctggtacatc tgtttcataa ggtgcaatag actttgtttt taacggtaac gaaatattca
    36901 agtctttgcc agatgaatgc attgagccac atcctgataa cactaatact gctgaaaata
    36961 tagttgctag tcttttaaac ttcatttcat taacactctc tttctaatta ctatgtaaaa
    37021 cccaataatt aatattttaa aactttattt tgttagagta aaatgttgtt caagtttagt
    37081 gattattaaa gttcaattaa ttgtagtaat tatgcttttt aaaaataaat attagaaatg
    37141 aagttagcga catgtatagt gattcaagac aaacatatat acctaagtat tgagcaactg
    37201 ctgtagtact acagcttggt tatgtttagt atcttttgct gaatataaca atagaacatg
    37261 attatgctga tttacaatat cctttaattt ttcaaaagcc tctttttgca catcctgatc
    37321 acgtaattct ttttcatatt tttctttaaa agctccaaaa agtttaggat catgttggaa
    37381 ccattgtcgc aactcagtag aaggggcaat gtcttttaac caataatcta ggttagcagt
    37441 tcttttcgaa atacctctcg gccagactct atcgactagg atacgaatag cgtcggtatt
    37501 atctttattg tcataaatcc gtccaatatc tacggtcatc ttgtgaactc ctttcttatg
    37561 aaattcagtg agcatacatc aatgcatgtt gtggtgggac gacgaaataa attttgcgaa
    37621 aatatcatta ctgtcccact cccaattaaa aaacagccat gacaaagtaa agtcatagct
    37681 gtttttgtat atatgttatt tatttttacg tttagttaaa tacttcaaac caactgcaaa
    37741 gacggtgtaa ccggcaagtg tttgaatcaa tgttttgatt aaattgttat ttttgacaac
    37801 aatatttgca gtaacaatac ttacgaaata taatgcaaat actttaacgt aacgttgatt
    37861 aagtttcata tgagtactaa acctcttttc tcagttatac tgcaacgctt agtcttggaa
    37921 taaatgtttc gtagtgtacg cgatccatat cgtaatttaa agatttaagt gcttcaatca
    37981 tagattgtaa gaattttgta ccaccacaga tataaatttc aggtttattt gctaaaaatg
    38041 cttttaattc ttcagcgcca atatagcctt gtttatcttt taagtgtgta tataatttag
    38101 cgttgtcatg atggcttgcg atactgttga agttgtcttt gaaaggtaaa tgttgttcat
    38161 tttcagcaac ttgaaccatc tgtgtatcta aacctttggc agaggcagct tcatacatag
    38221 ctactaaagg tgtaacacca attcctgaac ctaagaaaag ttgtggttca gtcgtattct
    38281 ctaatacgaa tccacctaca ggcgcagcta gattaatcat atcgccttct ttaatctcgt
    38341 cgtgtaatat tgttgaaact tcgccttcat gttctgttgt gacatcacgt ttaacgccaa
    38401 aagttaaatg gtttttatca cctgatacga tagaatagtg acgtttagct ctatatggaa
    38461 gtttatcact agaaacatca actgtgatgt attggcctgg tgtaaattca ctaaagtcat
    38521 attcttcagt ttcaactgta aatgatttaa tgtcttcaga ttcttgttta atattggtaa
    38581 ttttgaaagg tttaaaacca atccacatca tttgatcata aatttctttt tcaatttgga
    38641 tgaacacatc cgcaatgacg ccatatgctt tcgcccaagc ttgaatgaca gggtcgtttt
    38701 cttctaatcc tgtcacgtct tgaatggctt ttaataaatt ttcccccaca attggataat
    38761 gctcagcata aacttgtaat gcacagtgtt tatatgcgac tggcataatg actggcttaa
    38821 taacacttaa gttatcgata ttaaccgctg cggccattac agcttgtgct aatgctgaag
    38881 attgcatgcc tcgtttttgg ttcgtttgat taaacatgtt taaaagttca ggatgcgctt
    38941 taaacatttt tggataaaag attgacgtaa tttctgttcc tttctcttta agtaaaggca
    39001 ccgtttgttt gataatgtct ttctcttgtt ctgtaagcat gatactcctc ctttaatctg
    39061 tctactttga ttattctact aaaaatttcg atattcaatt aattggtttg agaaaatata
    39121 aataaaatgg caaatttgat aattgtatga catttttaat tttttaaata cttatcaata
    39181 agcattgtgt acaattgtgt atttgaaccc caacgattgc gtgcacttat ttgactaatt
    39241 caaaaaacat tgttgttttc ttagaaaaaa ttaaacatga taataaaaat gtgaaagtgt
    39301 aaaaaatcac tggcgaagta cgaagactaa agacatctaa gatgtaatcg tatacaaatt
    39361 aaaaaggtgt aaaaattaaa ataaaatgtg aaataaatca caatttaata ttgacccagt
    39421 acttaatgcg tgttacattt tatatgtgaa ataaatcaca aacttaaaag cggatgacac
    39481 atgacctttt aagttatgcg ttgaaaataa aagagatgtt tatttgcttt tgtatcgtca
    39541 ataagcagca ttaaactaac atatttgaag ctacacgtat gttagtgaat taatcataag
    39601 ggagtttttg taatgaacaa atttaaaggg aacaaagttg tattaatagg taatggtgca
    39661 gtaggttcaa gctacgcatt ttcattagtg aaccaaagca ttgttgatga attagtcatc
    39721 attgatttag acactgaaaa agttcgagga gatgttatgg atttaaaaca tgccacacca
    39781 tattctccaa caacagttcg tgtgaaagct ggcgaataca gtgattgtca tgatgcggat
    39841 ctagttgtca tctgtgctgg tgctgcacaa aaacctggag aaacacgttt agatttagta
    39901 tctaaaaact tgaaaatatt taaatcaatt gttggtgaag taatggcatc aaaatttgat
    39961 ggtattttct tggtagctac aaatcctgtt gatattttag cgtatgcaac atggaaattc
    40021 tctggtttac ctaaagaacg tgttataggt tctggtacaa ttttagactc tgcacgcttt
    40081 agattattgt taagcgaagc gttcgatgtt gcgccacgta gtgtcgatgc tcaaattatt
    40141 ggtgaacatg gtgacactga attaccagta tggtcacacg ctaatattgc gggtcaacct
    40201 ttgaagacat tacttgaaca acgtcctgag ggcaaagcgc aaattgaaca aatttttgtt
    40261 caaacacgtg atgcagcata tgacattatt caagctaaag gtgccactta ttatggtgtt
    40321 gcaatgggat tagctagaat tactgaagcg attttcagaa atgaagatgc cgtattgact
    40381 gtatcagcat tattagaagg cgaatatgat gaagaagatg tttacattgg tgttccagca
    40441 gtcatcaata gaaacggtat tcgcaacgtc gtagaaatcc cattaaacga cgaagaacaa
    40501 agcaagttcg cacattcagc taaaacatta aaagatatta tggctgaatc agaagaactt
    40561 aaataacttt ttataaaatc tataccattc caaaaattgt aaaaccttac cccaaaaaat
    40621 tgtataaagg gctatttgat acaactatat gtgtcgagta gccctatttt taatgtagtg
    40681 aaagtcgttg ttgaaattaa attcaaatct ggcacttaag cgttaatcat agcattaaga
    40741 tgattgtcta gcagaggcga tttgcgggct cactacagtg catgatgaac ttaatgcttc
    40801 aaatgtaaca ttaaaaataa aagcaacgat gtcacttctt acttcgtaca tcgttgccat
    40861 tagttctgtt gatatttcgg ttagtcttaa tccccgagca attcttcaat ttcatttttg
    40921 ataactgtaa cgtgaggccc ataaattact tgcacaccag tgccttgctg gattacacct
    40981 ttggcaccag tactttcgag taatacttta tcgactttgt cattttgatg aagtgtgacg
    41041 cgtagtctcg ttgcacaaca gtcaacgatt tcaatgttat cttggcctcc caaaccagca
    41101 acaatagttt gtgctctttc agtagcctca acttgttgtg ctgcagcttt atcttctcga
    41161 ccaggtgttt tgaaattaaa tttcgtaatt aagaatctga aaacgatgta atacaaacag
    41221 aaccacacaa ttccaatagg tatgacgtat aggtagtttg ttttactatt accttgtagc
    41281 acaccaaaaa gtaagaaatc gataaagcct ccactgaagg tttgaccaat tgtaatgttg
    41341 aaaatgtctg ccatcataaa tgctaatcca tcaaagaagg catggattac ataaagaata
    41401 ggtgcgacaa acaagaaact aaactctaaa ggttcggtaa tacctgttaa aaatgaagtg
    41461 agtgcagcgg ataacattaa accgccgaca acttttttat gttcaggttt agctgtgtga
    41521 taaattgcaa gtgcggcacc acataagccg aacatcatcg taataaaacg gcctgacata
    41581 aagcgtgaca cacctgaata atacttcgtc acatctggat caccgagttg agcaaagaag
    41641 atgttctgcg taccttgaac taagtgccct ttgacttcta aagtaccacc aagtgccgtc
    41701 tgccaaaacg gtaagtaaaa aatatgatgt aaaccgagtg gacctaacaa tcttaagatg
    41761 aagccataaa caaaagtacc gatggcacct gttttcgtta caaatccacc aacatgataa
    41821 atgccggctt gtatgcttgg ccaaatgaaa aacatcaata cacctaaaaa gattgcggca
    41881 aatgctgtga caatagggac aaatctagag ccaccaaaga aacctaaata cggtggtaat
    41941 accactttgt gatatttgtt gtgaagtatt gcggtcataa tacctgtggt aataccgcca
    42001 aaaacaccgg tttcaaccgt ttgtataccg agcaccatgc cttgtccatt ttgtgcaagc
    42061 tgatcttttg ccaatgtgcc cgtgatagtt aataagccat tcatagttgc gttcataatt
    42121 aagaaaccga gcagcgcagc taaacctgca gtacctttat cgcttctaga taatccgatt
    42181 gcgacaccaa ttgcaaagat gaccggtaaa ttttggaaaa caatactacc tgcagctgac
    42241 attaatgtaa aaatattttg taataaggta atatctaaaa tagggtatgc tttaacggtg
    42301 tttggattac ttaatgcacc accgataccc aacaatagac ctgcagctgg taagattgcg
    42361 ataggtagca taaaggactt gccgaactgc tgtgcttttt caaataaaga tttcatcaac
    42421 atccctccta attattctca atatagcttt tgagaaattt aatatcaata tatattctgt
    42481 gtatgaaaat atttttcata aaaattgttt gaatcatgta acaatcatat aaattgctgt
    42541 ttatattgtt gtgaaaatga gttgacaaaa gtcggtatag atatgtagac atcctatttt
    42601 tagcgaggta ggttgataag gcatatcgga taaatttata agccataaaa tagataaata
    42661 gtgtttgtat ccaaaaatat gagaaagtta aaactatttt tcaaaataaa catgattcac
    42721 cacataaata aatatacata agctatcgat aacaacttaa gaaaggtgga tatataaatg
    42781 aaaagaaaga ttattatgga ttgtgatcca ggacacgatg atgcaatagc attaatttta
    42841 gcgggggcaa ttgacagtcc actagagata ttagctgtaa caacagtcgc aggtaatcaa
    42901 tcagttgaca agaatacgac aaacgccttg aacgtattgg atattatggg acgtcaagat
    42961 atagcagtag cgaaaggtgc ggataggccg ttaattaaat cagctgcctt tgcttctgaa
    43021 atacatgggg aatctggatt agatggcccg aaactaccgt cgacaccatc acgtcaagca
    43081 gttgcaatgc cagcatcaga tatgattata aacaaagtga tgacgagtga tacacctgta
    43141 acaattgtag cgacaggtcc tcttacgaat gtagcaacgg cattgattcg tgagccaaga
    43201 atcgctgagc atattgaatc tattactttg atgggtggtg gtacatttgg aaattggacg
    43261 cctacagcag aattcaatat ttgggttgat gctgaagcag cgaagcgcgt ttttgaaagt
    43321 gggattacta taaatgtgtt tggtttagat gtaacacatc aagttttagc cgacgatctc
    43381 gtgattgaac gctttgaaag tatcaataat cctgttgcac agttcgtcgt agaattattg
    43441 caattcttta agaagacata caagactcac tttaatatgg acggtggtcc aatacatgat
    43501 gcttgtacaa ttttgtattt gttacaacca gaattgttta caatggtacc cgttaatatc
    43561 gacattgaac atcaaagtcc actaacttat ggtactatgg ctgtcgattt aaatcatgtt
    43621 acaggtaagc ctgccaatgc ttattttgct acagcagttg atgttgaaga agtgtggaac
    43681 ttgatagatt ataagttacg tacttacgaa taataatact taattaaata gatacagtta
    43741 gccctaaggc gcctgatata agcgtcctta gggtttttgt attggattac aatggtcatg
    43801 acaatttgat aatgattgag atatgtatgt taaaaatgct tcaaaaaaac acaaaaatat
    43861 atgtaaaaat ttcaattgct ttattttaaa agattaaaat cacaaagaat accgatataa
    43921 ttggaatgtt gtcgaaacat cacaatgatg tacatactca ttttgaaaat atgtgttcaa
    43981 agtgtgtaca tcggtgtgac gattgatgat aaattgagct cagatgctca aaggaggatc
    44041 gaacatgaac ggggataatc agcaaatact cagagaaatt gtattgaatc ctactattca
    44101 tggtaaagaa cttgaatcga tatttggttt atctcgtaga caactaggat atcgcattca
    44161 aaaaatcaat ttgtggcttg aacaagaggg ttatccaaaa cttgaaagaa caagccaagg
    44221 aaattttatt gtaagttctg aaatcatgac gttattcaag cgagatgtat cggagcagca
    44281 aatgttaaac ggtaacaatg tcatttttag catagaaaca cgtcgttatt atttaatgct
    44341 catgcttttt agtaaggaaa acgcaatgtc tctaaaccat ttttcaattg atttacaagt
    44401 cagtaaaaat actgtcattc acgatataaa tcatgtgaaa gagcaattgg aaaatcatgg
    44461 tttgtcactt aagtattctc gaaaacatgg ttatgaaatt gttggtgatg aatttgaagt
    44521 tcgccgtttc ttcattaaat tgattgatca aaggttgaat catgatatta ctaaaagtga
    44581 agttttaaag gcgctcaact taacattcga agatatcgca tatcaaaaag acaaaatcaa
    44641 acaggtagaa caatttttga agagtcgctt tatagacaaa tcacttagtt cactgcctta
    44701 tgtcctttgt gtgattcgta gacgaattca aagtggtcat gtgatgaatc cattaaatat
    44761 taattatcag tatttgaggg atacgaaaga atatcaagca acggagatta tgacgcaaca
    44821 tgagccggat ttgccagaag cggaaaagtt atatttgaca ttacacttac tttcaacaag
    44881 tgtgcaatgg actgatttgc aagaatcaga tagcatatcg aatttaacga tggccatcgc
    44941 tcaaatgatt caccattttg aacaaatcac ttttattaac attgaagata aggagaaatt
    45001 atcacagcaa ctcttgttac atttaacgcc tgctttttat aggattaaat ataacttaac
    45061 ggatcgtgat gaattaatca atcctttaca aggaaattat caatccttat ttcatatggt
    45121 gaaacaatca tgccaatcgt taactgaata tttcggaaaa tcgttgcctg ataatgaaat
    45181 agcatattta accatgttgt tcggaggtag tttgagacgt caagatgaaa acttcgatgg
    45241 caagataaaa gctattatcg tgtgtacaca aggcacgtca gtatcacaaa tgatgttata
    45301 cgagttgcga aacttatttc cagaaattat tttcttagat gcgatttcac ttagaacatt
    45361 tgaaaattac acattagatt atgacatcgt cttttcacca atgtttgtcc taacacataa
    45421 aaaattattt atcacaaaag tagctttatc tgaaaatgag caacgaaagt tacgtaaaga
    45481 agtgatgaag tacattaata aggaatcggc tgacattgat aaggaaataa acaagttaat
    45541 ggcattaatt gaacgcacaa cgacagttaa tgacattaca gaactacgtg atggtttaga
    45601 agattttatt gcgaattata attcaatttc aaccattaat ggatcgattg tcacacaaaa
    45661 taagacatta gatttagctg acttgatacc agcaaggcac gtgaaaagaa tacatcatgt
    45721 tgaaaatatt gatgaagcta ttgctaaagc aagtgatgtg ttagttgcta atcattttat
    45781 tgatattaaa tatattcatg agatgcaaca ggtatttgat gattcgtata tggttatcat
    45841 gcaaaatatt gctattccac atgcatactc tgaaaagcat gtacataaaa cggcgatgag
    45901 tatgttgata ttacaagaac caatatacat gtcagatggc acagcaatcc atattattgt
    45961 acctattgct gctgttgata aagtgacaca cttaagagcg ttactacaat tgagagatgt
    46021 ggcgcaagac aatgatgcaa ttaagcgcat catacaaagt cgcaaaaatt ctgatgtaaa
    46081 tgagatttta aaaaattatt caaataaaga agcgagggaa aatggatggg acagcaatta
    46141 gtgcataaag aaaatataat gctcaatttg tcggcaactg ataaagaatc cgtattgtca
    46201 caaatgtcag atgtgttatt tcaaaatggg ttcgtgaagt caacgtttaa agatgcagtc
    46261 atcgacagag aaaaagaatt tgctactggt ttaccaacgc atctatgttc ggtcgctata
    46321 ccgcatacag atgtcgaaca tattaaccat agaacgatag gtgtggctgt tctagaaaaa
    46381 gaagtgccgt ttattgaaat gggaacactt gatcaacaga cagaagtgaa aatcgttttt
    46441 atgttagcaa tggataaagt agatgatcaa cttaagctgt tacaacagtt gatgcaaatt
    46501 tttcaaagtg aagaaaaatt ggagcagatt ctgcgaacga aagatgaaac aattttagca
    46561 acactaatca atgattattt ggaatataac taaaaattaa ttggaggaat tgaaaatgaa
    46621 acaagtatta gtagcatgtg gtgcaggtat tgcaacgtca acagtagtaa ataatgcaat
    46681 tgaggaaata gcaaaggaac acaatattaa agtagatatt aaacaaatca aaattacaga
    46741 agttggacct tatgaagaca ctgcagattt attagttaca actgcaatga caaaaaaaga
    46801 atataaattc ccagttatca acgcacgtaa tttcttaact ggtattggta ttgaagaaac
    46861 aaaacaacaa atcttaacag agttacaaaa ataacggaat tgatatgtaa cgtggttcaa
    46921 taacatataa atatatgcaa attgcatata aatgactatc acgacaaatg attgttgatg
    46981 acatagaaac gcagtgactg taattcaaag ggactgcagt cgaatgtagc aagggttgtc
    47041 gttgaaatga ctgtaacgtc aaatgtaatc acaatcggaa agtatcgtga caatgcatat
    47101 ataacaggga gggtttaaat atgagttact tcactgattt tgtaagggga tttttagatt
    47161 taggtgcaac tgttatttta ccggttgtca tattcttgct tggcctattc tttaggcaga
    47221 aaattggagc ggcatttagg tctggtttaa caataggtgt ggcttttgta gggattttct
    47281 tagtcatcga tttattagtt aaaaatttag ggccagcagc acaagcgatg gttaaaaatt
    47341 taggcgtcag tctgaatgtg attgatgtag gttggccagc aacatcatct atcgcttggg
    47401 catcatctgt cgcagcattt attattccac tcggaatcat agttaacgtt gtattgctag
    47461 taactaaagt gacaaagacg atgaatgtag atatttggaa tttttggcat tatacgttta
    47521 cagcagcaat ggtttatgcc gtatcaggca gtatttggca agcgttatta gcagcagtta
    47581 ttttccaagt tatctgtttg aaagtagcag attggacagc accgatgatg agtgagttct
    47641 ttgatttacc aggtgtatcg attgctacag gaagtacaat ttcttatgca ccaggtattt
    47701 acttagttaa attgttacaa aaagtacccg gtctgaataa gttagatgct gatcctgaaa
    47761 caattcaaaa acgttttggc gcatttggag aatctatctt tgtcggctta attttaggtt
    47821 taggtattgg tgtgttagca ggttacaaac ctggagacat cattaattta ggaatgtcaa
    47881 tggctgcagt aatggtatta atgcctagaa tggtaaaaat cttaatggaa ggtttaatgc
    47941 cagtttcaga gtctgcaaga acatggctaa acaaacgttt tggcgaacgt gaaatttata
    48001 ttggattgga tgcggctgta gcattaggtc atccagcggt tatttcgaca gccttaattt
    48061 tagtacctat cactgtttta ttagccgtta ttttaccagg aaaccaagta ctaccttttg
    48121 gtgacttagc aactatacca tttgttgtcg cgtttattgt tggtgcagca agaggaaaca
    48181 ttattcattc tgtcattgtg ggtacgatta tgattgcaat ttcactatat attgcaacag
    48241 acgtagcacc cattttcaca gatatggcga aaggtacgaa tgtacaaatg ccaaaaggtt
    48301 catctgaaat ttcaagtatt gatcaaggtg gtaatatcgt taactatctt atctttaaac
    48361 tatttagtct attcaattaa aaatcgaggt gtttgtggtg aaagctttag taaaaacaag
    48421 agaaggacat ggcaacttag aacttcttga taaagaagtt gcaacaccgc tagatgataa
    48481 agtaaagatt aaagtacatt atgcaggaat ttgtggcaca gatattcata cttatgaagg
    48541 tcattataaa gttaattttc cagtgacatt aggtcatgaa ttttctggtg aaatcgttga
    48601 agttggagca gacgttaaag attttaaagt tggtgaccgt gtcacttctg aaacgacatt
    48661 ctatatttgt aatgagtgtg aatactgtga atcaaaagac tataatttat gcaaccatcg
    48721 aaaaggtatt ggaacacaag ttgatggcgc atttactaat tatgtcattg cacgtgaaga
    48781 aagtttgcat catattccag acgaagtatc gtatcagtct gcagctatga cagaaccatt
    48841 agcatgtgca catcatggtg tttctaagat tcaagtcaat tcaggcgatg tagcagttgt
    48901 aatgggacct gggccaatcg gattacttgt agcacaagtg ttgaaaagta aaggcgcaac
    48961 tgttgtggta actggattgg acaatgacaa agtcagatta gataaagcag aagcattgca
    49021 catggattat gtagtcaatt tacaacaaac agacttaaaa acgtatatca atggcattac
    49081 agacggttac ggtgcagatg ttgttgttga atgttcaggt gcagttccag cagcacgaca
    49141 aggtttggat attttacgca aaaaaggttt ctacagtcaa ataggtattt ttaaggatgc
    49201 tgaaattcca tttgatatgg aaaaagtgat tcaaaaagaa ataacagttg ttggtagtag
    49261 aagtcaaaag ccagcagatt gggaaccttc attgcgactt atggcggatg gtttagtaaa
    49321 tgctgaagct ttggtgacaa aaatatatga tatttcgaaa tgggacgagg cgtatcaaca
    49381 tttaaaatca ggcgaaggta ttaaagcatt acttaagccg ctcgatttag atgaaaatga
    49441 aggagagaat taatatggta gaatcaatgc taacttttat gcttgggcca ttaagacaaa
    49501 tcactgattt ttatatggaa catttactcg taagtaattc cattgtcatt gcaggttatt
    49561 ttgcgacagg tatttttaaa aagaaaaaag ttgtgaatta aatcagagtt gaggtgattt
    49621 acaagtgaaa gctttgaaat tatatggcgt ggaagattta cggtatgagg ataatgataa
    49681 gccagtcatt gaaagtgcga atgacgttat tgttaaagtg cgcgcaacgg gtatatgtgg
    49741 ttcagtcacg tcacgataca aaaaaatggg cccatacatt caaggtatgc catttggtca
    49801 tgaattttca ggtgttgtag atgccattgg aagtgatgtt acgcatgtta aggtcggcga
    49861 caaagtgaca ggttgtccag ccataccttg ttatcaatgt gagtactgtt tgaaaggtga
    49921 atatgcacga tgtgaaaagt tgttcgtcat tggctcatat gaacctggat cgttcgcgga
    49981 atatgtcaaa ttgccagcgc aaaatgtttt aaaggttcca gacaatgttg attacattga
    50041 agcagcaatg gttgagccat cagccgttgt tgcgcatgga ttttataaat cgaatataca
    50101 acctggtatg actgttgcag taatggggtg tggcagtata ggattgttag ctattcaatg
    50161 ggcacgaata tttggtgctg cacatatcat cgctatagat atagatgcgc ataaactaga
    50221 tattgctaca tcattgggcg cacatcaaac aatcaattca aaagaagaag atcttgagaa
    50281 attcatcgaa aatcattacg ccaatcaaat cgatttagct atagaatcat caggtgctaa
    50341 agttacgatt ggtcaaatat tgacgctacc taaaaaaggt ggcgaggtgg tattactcgg
    50401 aataccatat gatgatattg agattgatcg cgttcatttt gaaaaaattc tgcgtaacga
    50461 gttgacagta tgtggctctt ggaactgttt gtccagtgat tttccgggca aagagtggac
    50521 ggcaacctta cattatatga agacgaaaga tattaatgta aagcctatta tttctcattt
    50581 tttaccgtta gaaaaaggcc cagagacatt tgataaatta gttaacaaga aagaacgatt
    50641 tgataaagtc atgtttacga tttattagta tgcaccttcg aggacgaaaa cgctggtata
    50701 gttatagcta tgaaagtgcg aatgccgtct ggtctacaga tactatcgaa ataattcatc
    50761 ttcgaatata cgttgctaaa tagctggttt acttgtgtga aatatgcttg tgaatcggtt
    50821 gttttgcatt ttgtatactt aaaatgagat ggcaatattt gataattttt aaagtgaaaa
    50881 tcaagtacag ccacttaata agataaattt attataatat atggtaaaat gatggcagta
    50941 ataatgaatt tgaaaaagag taaacattaa tacctttaac aatttaatat cgtcagtgtt
    51001 aatgattaac tgcatggcaa aacaacttag aatggtcagt tacaaaaata catttttata
    51061 aaaaattatc acactattgt gacaactacc tttggcttaa taatagaggc aagtgagcaa
    51121 taggttaggc ttatgtgcgg gcataggtca gtaatgtata aatggaaatg atgtaatgac
    51181 agaatggagg acaacatgat ttatgcaggt attttagcag gaggtattgg ttcgagaatg
    51241 gggaacgtgc cattaccaaa acaattttta gatattgata ataaaccgat tttaatccat
    51301 acaattgaga agtttatttt agtgagtgaa tttaatgaga ttattatcgc aacgccagca
    51361 cagtggattt cccatacaca ggatatttta aaaaaatata acattacaga tcaacgtgtc
    51421 aaagtagttg caggtggcac ggatcgaaac gaaacaatta tgaacattat cgaccacatt
    51481 cgcaatataa atggaattaa taatgatgat gtgattgtaa ctcatgatgc cgtaagacca
    51541 tttttaactc aacgtattat taaagagaat attgaagtag cagcaaaata tggtgcagta
    51601 gatacagtca ttgaagcaat tgatacgatt gtaatgtcta aagataaaca gaacatacac
    51661 agtatccctg taaggaatga aatgtatcaa ggccaaacac cacaatcatt taatattaaa
    51721 ttattacaag atagttatcg cgccttaagt agtgaacaaa aagaaatctt atcagatgca
    51781 tgtaaaatca ttgtcgaatc tggacatcca gttaaattgg tacgtggaga actatacaac
    51841 attaaagtga caacaccgta tgatttaaaa gtagcaaatg ccattattca aggtgatatt
    51901 gccgatgatt aatcaagtat atcaactcgt tgcaccgaga cagttcgacg tcacatataa
    51961 taatgttgat atttatggta atcatgtcat cgtaagacct ttatacttgt ctatttgtgc
    52021 agctgatcaa aggtattaca caggtcgaag agatgaaaat gtactgcgcc aaaaattacc
    52081 aatgtcatta gttcatgaag ctgttggtga agttgtattc gatagtacag gggtatttga
    52141 aaaaggtacg aaagtagtaa tggtgccgaa tacacctaca gagcaacatc atattattgc
    52201 ggagaattac ttagcctcta gttattttag atctagtggt tatgatggtt ttatgcaaga
    52261 ctacgttgtg atggcacatg atcgtatcgt tccgctgcct aatgacattg atttgagtac
    52321 gatttcatac acagaattag tgtcagtaag ttatcatgct atacaacgat ttgaacgtaa
    52381 atctatacct ttgaaaacca gctttggtat ttggggtgat ggtaacttag gttatattac
    52441 tgctattttg ctacgtaagt tgtacccaga agctaaaatt tatgtatttg gtaagacaga
    52501 ctataaatta agtcattttt catttgtaga tgacatcttt acagtaaatc aaataccaga
    52561 tgatcttaaa attgatcatg catttgaatg tgttggaggt aaaggaagtc aagttgcact
    52621 tcaacaaata gttgaacata tttcaccaga aggcagtatt gctttgttag gcgtaagtga
    52681 attacccgtg gaagtgaata cacgattagt acttgaaaaa ggattaacgt tgattggtag
    52741 tagtcgaagc ggctctaaag attttgagca agttgttgat ttatatcata agtacccaga
    52801 cattgttgaa aagttagcct tattaaaagg acatgaaatt aatgtatgta cgatgcaaga
    52861 tatcgtccaa gcgtttgaaa tggatttatc gacatcttgg ggaaaaacag tattgaaatg
    52921 gacgatttaa taaaccaatg ggggaataac aatgacaaaa acgaaacaag caatacatat
    52981 tgataacata tactgggaac gtgttcagtt atatattgaa ggacatagtg aaggtgtaga
    53041 tttaacatca ggacaatttg ttctgaggaa tttaaccgaa acaaaaacat tagaagcaaa
    53101 tgaaatgaaa atagacggta atacatttat atgtagattc aacgtcgcaa tattagacga
    53161 tgggtattat ttaccaatgg ataaatattt gtttgtttat catgaccagt tagagtatat
    53221 tggacaactt aatccaaata ttattgatca agcttatgcg gcattaaatg aagagcaaat
    53281 tgaagaatac aatgagctga ctacacaaaa tggaaaagca aactatgtgt tagccaacga
    53341 agctaaagtt ttccgcaaag gtggcgtatc acaacatacg gtttatacca ttactccaga
    53401 aatagcaagt gacgttaacg aatttgtatt tgatattgaa atcaccttac ctcaagagaa
    53461 atcaggggtc attgcgacaa gcgcacactg gcttcataaa caaggccata aagcttcatt
    53521 tgaaagtaga agtttcttat ttaaagctat ttttaatatt acaaagttac tacatattaa
    53581 aagaagcaaa acaatattat tcacatcaga ttcacgtccg aatttatcag gtaactttaa
    53641 atatgtatat gatgagttac tacgccaaaa agtagatttt gattatgata ttaaaacggt
    53701 atttaaggcg aatattacgg atagacgtaa atggagagac aagtttagat tgccatattt
    53761 acttggtaag gccgattata tttttgtcga tgatttccat ccattaattt atacggttcg
    53821 ctttagacca tcacaagaaa ttattcaagt gtggcatgca gttggtgctt ttaaaacagt
    53881 tggctttagt cgtacaggta aaaaaggtgg tccgtttatc gattcattaa accatcgtag
    53941 ttacacgaaa gcatatgttt catcagaaac cgatattcca ttttatgctg aagcatttgg
    54001 aattagagaa gaaaatgttg taccaacagg tgtaccacgt actgatgtac tatttgatga
    54061 agcttatgca acacaaatta aacaagagat ggaagatgaa ttgccaatta taaaaggtaa
    54121 gaaagttatt ctattcgcac cgacatttag aggtaatggt cacggtacgg cacattatcc
    54181 attttttaaa attgattttg aacgtttagc aagatactgc gagaagcata atgcagttgt
    54241 gttattcaaa atgcatccgt tcgtaaaaaa tagacttaat atttcacgtg aacatagaca
    54301 atactttatc gatgtgtcag atcatcgtga agttaacgat attctctttg ttacagactt
    54361 gttgattagt gattattcat ctttaatata tgaatatgca gtatttaaaa agccgatgat
    54421 tttctatgca tttgacttag aagattacat tacgacgcgt gatttctatg aaccatatga
    54481 atcatttgtt ccaggtaaaa ttgtacagtc ctttgatgca ttaatggatg ctttggacaa
    54541 tgaagattat gaggttgaaa aagttgtgcc attcttagat aaacatttta aatatcaaga
    54601 tggtcgctca agtgaacgtt tagtcaaaga tttgtttaga cgctaatgtt ggcatatatt
    54661 acttgccatg caaatgagtc ataaggcata gttttcaaga agggttctga caatgaagtg
    54721 agcaacatgt catgatgaga agcaggacta tacaatgaga ataacctttt gatttttcat
    54781 gcataaggcg attcaatcaa aagtaatcac ccttccaact gaattgtcat tttgtaaaat
    54841 aaaataatca atccaatcgt tatctaattc ataaacgtgt aaacacatac gttatgaatg
    54901 gataacgatt ttttgttatg ttaaagtggt acattaatca tgtatttcgt atgataatta
    54961 acgacaagtg taatggttaa atgtatttta tgatgaaatg ctataataag catggttaca
    55021 atgagcttgc tcatacatat taatataatt acaaaaacac gtcggaggta cgacatgatt
    55081 aaaactacaa ttaaaaaatt gatagaacat agtatatata cgacatttaa attactatca
    55141 aaattgccaa acaagaatct aatttatttt gaaagctttc atggtaaaca atacagcgac
    55201 aaccccaaag cattatatga atacttaact gaacatagtg atgcccaatt aatatggggt
    55261 gtgaaaaaag gatatgaaca catattccaa cagcacaatg taccatatgt taaaaagttt
    55321 tcaatgaaat ggtttttagc gatgccaaga gcgaaagcgt ggatgattaa cacacgtaca
    55381 ccagattggt tatataaatc accgcgaacg acgtacttac aaacatggca tggcacgcca
    55441 ttgaaaaaga ttggtttgga tattagtaac gttaaaatgc taggaacaaa tactcaaaat
    55501 taccaagatg gctttacaaa agaaagccag cgttgggatt atctagtgtc acctaatcca
    55561 tattcgacat cgatatttca acatgcattt catgttagtc gagataagat tttggaaaca
    55621 ggttatccaa gaaatgataa attatcacat aaacgcaatg atactgaata tattaatggt
    55681 attaagacaa gattaaatat tccattagat aaaaaagtga ttatgtacgc gccaacttgg
    55741 cgtgacgatg aagcgattcg agaaggttca tatcaattta atgttaactt tgatatagaa
    55801 gctttgcgtc aagcgctgga tgatgattat gttattttat tacgcatgca ttatttagtt
    55861 gtgacacgta ttgatgaaca tgatgatttt gtgaaagacg tttcagatta tgaagacatt
    55921 tcggatttat acttaatcag cgatgcgtta gttaccgact actcatctgt catgttcgac
    55981 ttcggtgtat taaagcgtcc gcaaattttc tatgcgtatg acttagataa atatggcgat
    56041 gagcttagag gtttttacat ggattataaa aaagagttgc caggtccaat tgttgaaaat
    56101 caaacagcac tcattgatgc attaaaacaa atcgatgaga ctgcaaatga gtatattgaa
    56161 gcacgaacgg tattttatca aaaattctgt tcattagaag atggaaaggc gtcacaacga
    56221 atttgccaaa cgatttttaa gtgataactt aaaaacaata aaaaattata aattaattag
    56281 ttaagtgata taaataataa acgaaatgtt tgcttgtatg ttattatttg tgtatgaaaa
    56341 cgtctgatat aatgtaatat aggtttaaac aaaatatgct aaaatataag caaaatatgt
    56401 ataattttaa gtaatacata gacatttaga gttttgattt taaaatgagt tttcaattgg
    56461 aaaatgcaac gaaat
//
LOCUS       DAKPJH010000004        49777 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.004, whole genome shotgun sequence.
ACCESSION   DAKPJH010000004 DAKPJH010000000
VERSION     DAKPJH010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 49777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49777
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.004"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            5..119
                     /gene="rrf"
                     /locus_tag="OY092_000186"
     rRNA            5..119
                     /gene="rrf"
                     /locus_tag="OY092_000186"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(831..2213)
                     /locus_tag="OY092_000187"
     CDS             complement(831..2213)
                     /locus_tag="OY092_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HCX1075163.1"
                     /translation="MKNTLYHQLYEKLKKQIIEGQFKEGDKFYSKRQLSKHLSISQTT
                     VEHAYQLLLDEGYIYSRPRSGYFVSEIESLTILNNQPIPSLFDDDSYKPKASDEAYDY
                     AFNLDEIDTKHFPIELFRKYSKDLYDTNHLNQLRRGHFQGELHLRFQLAFYLFTNRGV
                     ICDPNQIIIGSSTEQLVNQLVDLLYTSTFIIEKPSYPPIKNILDKKQVEYEQIEVEDN
                     GINVDEVIKSQKNIVYITPSHQFPTGYVMDLKKRTQLIQWAQEKEERFIIEDDYDSEF
                     RYFGKPIPAIQGLYSRGEKVIYISTFSKSIFPSCRVAYMVLPYSIMKKYHSQNHIEGN
                     TVPVHMQNLIATFISSGGFERHLNKMRRIYRRKLTYILKRLKPYKEQLDIQGAETGMH
                     FTITVKNGLTLQECLDRANKVKLKLQVYNFDDDQDYKKTPKFILGFGGIDDDALKPHV
                     DALIKTLIIK"
     gene            2317..3204
                     /gene="pdxS"
                     /locus_tag="OY092_000188"
     CDS             2317..3204
                     /gene="pdxS"
                     /locus_tag="OY092_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HCX1075164.1"
                     /translation="MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVM
                     ALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYI
                     DESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVAT
                     PQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAM
                     KGLDINQLSLEERMQERGW"
     gene            3208..3768
                     /gene="pdxT"
                     /locus_tag="OY092_000189"
     CDS             3208..3768
                     /gene="pdxT"
                     /locus_tag="OY092_000189"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HCX1075165.1"
                     /translation="MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILP
                     GGESTTLRRLMNLYGFKEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRN
                     SFGRQVDSFETELDIKGIATDIEGVFIRAPHIEKVGQGVNILCKVNEKIVAVQQGKYL
                     GVSFHPELTDDYRVTDYFINHIVKKA"
     gene            complement(3976..5190)
                     /locus_tag="OY092_000190"
     CDS             complement(3976..5190)
                     /locus_tag="OY092_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCX1075166.1"
                     /translation="MHILIGIIGIIFFLALAFLFSSDRKNIRWKYVGILLAIQLIFAF
                     ILLKTTMGIKVIGGISNGFNYLLLKAADGVNFVFGGIQYIDPKQPPFFFSVLLPIVFI
                     SAIIGILQYTKILPLIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISIKKQLP
                     YIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYKV
                     NEEDDKLLVEETEERQQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGIVSNI
                     FSTVSGGAISWDFQTLIGFVFAPFAFLVGVPWQDAVQAGSVMATKLLSNEFVAMQALG
                     KLSDLSEHAKGVTSVFLVSFANFSSIGIISGAIKSLNDKKGDTVARFGLKLLFGATLV
                     SFISAAIAGFFI"
     gene            5348..5809
                     /locus_tag="OY092_000191"
     CDS             5348..5809
                     /locus_tag="OY092_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000551761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HCX1075167.1"
                     /translation="MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNY
                     VIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYII
                     DGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY"
     gene            5828..6394
                     /locus_tag="OY092_000192"
     CDS             5828..6394
                     /locus_tag="OY092_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HCX1075168.1"
                     /translation="MLCENCQLNEAELKVKVTSKNKTEEKMVCQTCAEGHHPWNQANE
                     QPEYQEHQDNFEEAFVVKQILQHLATKHGINFQEVAFKEEKRCPSCHMTLKDIAHVGK
                     FGCANCYATFKDDIIDIVRRVQGGQFEHVGKTPHSSHKKIALKRKIEEKNEYLKKLIE
                     IQDFEEAAIVRDEIKALKAESEVQHDDA"
     gene            6384..7391
                     /locus_tag="OY092_000193"
     CDS             6384..7391
                     /locus_tag="OY092_000193"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HCX1075169.1"
                     /translation="MTHNIHDNISQWMKSNEETPIVMSSRIRLARNLENHVHPLMYAT
                     ENDGFRVINEVQDALPNFELMRLDQMDQQSKMKMVAKHLISPELIKQPAAAVLVNDDE
                     SLSVMINEEDHIRIQAMGTDTTLQALYNQASSIDDELDKSLDISYDEQLGYLTTCPTN
                     IGTGMRASVMLHLPGLSIMKRMTRIAQTINRFGYTIRGIYGEGSQVYGHTYQVSNQLT
                     LGKSELEIIETLTEVVNQIIHEEKQIRQKLDTYNQLETQDRVFRSLGILQNCRMITME
                     EASYRLSEVKLGIDLNYIELQNFKFNELMVAIQSPFLLDEEDDKSVKEKRADILREHI
                     K"
     gene            7405..9861
                     /locus_tag="OY092_000194"
     CDS             7405..9861
                     /locus_tag="OY092_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HCX1075170.1"
                     /translation="MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEG
                     IAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHYTPRAKKVIELSMDEARKLHHNF
                     VGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
                     PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVIL
                     FIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF
                     QPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAI
                     DLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLE
                     KQYEEAKNEWKNAQNGMSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHE
                     RVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD
                     DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHP
                     DVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDY
                     ETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNIN
                     IIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDG
                     KEFKYDIAEQTSETKTPSQA"
     gene            10346..11710
                     /gene="radA"
                     /locus_tag="OY092_000195"
     CDS             10346..11710
                     /gene="radA"
                     /locus_tag="OY092_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HCX1075171.1"
                     /translation="MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIVEKAANPK
                     HGVKTKELAGKVQKLNSIKHETTPRVLTDSAEFNRVLGGGIVSGSLVLIGGDPGIGKS
                     TLLLQICASLSQKKKVLYITGEESLSQTKLRAERLDEDSSELQVLAETDLEVIYQTVK
                     EEQPDLLVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEG
                     QIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVNNP
                     SEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPRRMATGIDHNRLSLL
                     MAVLEKKENYLLQQQDAYIKVAGGVKLTEPAVDLSVIVATASSFKDEAVDGLDCYIGE
                     VGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPKNNIGGWTYPEGIQVIGVTTVHEALSF
                     ALHS"
     gene            11735..12808
                     /locus_tag="OY092_000196"
     CDS             11735..12808
                     /locus_tag="OY092_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017328539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HCX1075172.1"
                     /translation="MNIVKLMVIIIYLIIGSALGIIIIPEIANDLGLQNSSFLKNHYV
                     DGIIGSIFMFLIFGVFIRRVTNAIKGLEHFIMRRSAVEILFATIGLIIGLLISVMVSF
                     ILESIGNSIFNHFIPVIITILLCYFGFQFGLKKRDEMLMFLPENIARSMSQHTKSATP
                     KIIDTSAIIDGRILEVIRCGFIDGNILIPQGVINELQIVADSNDSVKREKGKRGLDIL
                     NELYDLDYPTKVIHPTKTHSDIDTMLLKLAKQYHASIITTDFNLNKVCHVHGIKALNV
                     NDLSEAIKPNVHQGDQLHILLTKMGKEPGQAVGYLDDGTMVVVDNAKNLIGSHVNLEV
                     VSLLQTSSGRIVFAKKIEDTVSL"
     gene            13365..14819
                     /locus_tag="OY092_000197"
     CDS             13365..14819
                     /locus_tag="OY092_000197"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HCX1075173.1"
                     /translation="MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIE
                     DTDKKRNLEDGETSQFDNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAE
                     DKAYKCYMTEEELEAEREAQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVP
                     QNQTYSFDDMVKGNISFDSNGIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDH
                     ISNTPKQIMIYEAFGWEPPRFGHMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEA
                     LFNFIALLGWSPEGEEEIFSKEEFIKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDT
                     ETVFQLALPHLIKANLIPEVPSEEDLSWGRKLIALYQKEMSYAGEIVPLSEMFFKEMP
                     ALGEEEQQVINGEQVPELMTHLFSKLEVLEPFEAAEIKKTIKEVQKETGIKGKQLFMP
                     IRVAVTGQMHGPELPNTIEVLGKEKVLNRLKQYK"
     gene            15242..15889
                     /gene="cysE"
                     /locus_tag="OY092_000198"
     CDS             15242..15889
                     /gene="cysE"
                     /locus_tag="OY092_000198"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HCX1075174.1"
                     /translation="MILLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAH
                     KLYNQKKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTI
                     YQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYS
                     TVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII"
     gene            15873..17273
                     /locus_tag="OY092_000199"
     CDS             15873..17273
                     /locus_tag="OY092_000199"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HCX1075175.1"
                     /translation="MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPA
                     INYDVVRRYFEYQGYNVEYVSNFTDVDDKLIKRSQELNQSVPEIAEKYIAAFHEDVGA
                     LNVRKATSNPRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSID
                     DLKVGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGP
                     TIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILV
                     HDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATN
                     IENQQTYIDQIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDK
                     FKAVYQIFSDVLGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQ
                     NIILEDTPQGVRFKRG"
     gene            17266..17670
                     /locus_tag="OY092_000200"
     CDS             17266..17670
                     /locus_tag="OY092_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HCX1075176.1"
                     /translation="MDNQQDNHIKLLNPLTLAYMGDAVLDQYVRTYIVLKLKSKPNKL
                     HQMSKKYVSAKSQAQTLEYLMEQEWFTDEEMDILKRGRNAKSHTKAKNTDVQTYRKSS
                     AIEAVIGFLYLEKREERLEALLNKIITIVNER"
     gene            17678..18424
                     /gene="rlmB"
                     /locus_tag="OY092_000201"
     CDS             17678..18424
                     /gene="rlmB"
                     /locus_tag="OY092_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HCX1075177.1"
                     /translation="MEDTVIVGRHAVREAIITGHPINKILIQEGIKKQQINEILKNAK
                     DQKIIVQTVPKSKLDFLANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDG
                     LEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKT
                     IDELKDNGFWVAGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPM
                     VGHVNSLNASVAASLMMYEVFRKRHDVGEI"
     gene            18424..18948
                     /locus_tag="OY092_000202"
     CDS             18424..18948
                     /locus_tag="OY092_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HCX1075178.1"
                     /translation="MKERYLIIDGYNMIGQSPTLSAIAKENLEEARIQLIDAIANYNA
                     VISDEIICVFDAYDQSGVEREYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHIT
                     VVTSDMSEQHAIFGSGAYRISSREMWRDLKENEIDVSKSLDDISENKPRTRIPLSSEI
                     LAEFEKIRRGHHKK"
     gene            19029..19598
                     /locus_tag="OY092_000203"
     CDS             19029..19598
                     /locus_tag="OY092_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HCX1075179.1"
                     /translation="MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRRIKTFGFN
                     HYDLEDLYQEILIRMYRSVQTFDFSGEQPFTNYVQCLITSVKYDYLRKYLATNKRMDN
                     LINEYRVTYPCAIKRFDVENNYLNKLAIKELICQFKYLSAFEKDVMYLMCEQYKPREI
                     AQLMHVKEKVIYNAIQRCKNKIKRYFKMI"
     gene            19713..19856
                     /gene="rpmG"
                     /locus_tag="OY092_000204"
     CDS             19713..19856
                     /gene="rpmG"
                     /locus_tag="OY092_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002451211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCX1075180.1"
                     /translation="MRKIPLNCEACGNRNYNVPKQEGSATRLTLKKYCPKCNAHTIHK
                     ESK"
     gene            19912..20094
                     /gene="secE"
                     /locus_tag="OY092_000205"
     CDS             19912..20094
                     /gene="secE"
                     /locus_tag="OY092_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HCX1075181.1"
                     /translation="MAKKESFFKGVKSEMEKTSWPTKEELFKYTVIVVSTVIFFLVFF
                     YALDLGITALKNLLFG"
     gene            20107..20655
                     /gene="nusG"
                     /locus_tag="OY092_000206"
     CDS             20107..20655
                     /gene="nusG"
                     /locus_tag="OY092_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HCX1075182.1"
                     /translation="MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVV
                     IPEEEENQVKDGKAKTTVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSK
                     PNPLLPEEVRFILKQMGLKEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLT
                     VLVDMFGRETPVEVEFDQIEKL"
     gene            20836..21258
                     /gene="rplK"
                     /locus_tag="OY092_000207"
     CDS             20836..21258
                     /gene="rplK"
                     /locus_tag="OY092_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012664221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HCX1075183.1"
                     /translation="MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTQDQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVGTVTK
                     DQVREIANSKMQDLNAADEEAAMRIIEGTARSMGIVVE"
     gene            21466..22158
                     /gene="rplA"
                     /locus_tag="OY092_000208"
     CDS             21466..22158
                     /gene="rplA"
                     /locus_tag="OY092_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HCX1075184.1"
                     /translation="MAKKGKKYQEAASKVDRTQHYSVEEAIKLAKETSIANFDASVEV
                     AFRLGIDTRKNDQQIRGAVVLPNGTGKSQSVLVFAKGDKIAEAEAAGADYVGEAEYVQ
                     KIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGK
                     VEYRAEKAGIVHASIGKVSFTDEQLIENFNTLQDVLAKAKPSSAKGTYFKSVAVTTTM
                     GPGVKIDTASFK"
     misc_feature    22246..22392
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            22430..22930
                     /locus_tag="OY092_000209"
     CDS             22430..22930
                     /locus_tag="OY092_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HCX1075185.1"
                     /translation="MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQ
                     LREAGVEYKVYKNTMVRRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKD
                     HEALEIKSGVMEGNVITAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQ
                     KEESAE"
     gene            22973..23341
                     /gene="rplL"
                     /locus_tag="OY092_000210"
     CDS             22973..23341
                     /gene="rplL"
                     /locus_tag="OY092_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HCX1075186.1"
                     /translation="MANHEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAVAGAA
                     GGADAAAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPKVIKEALPK
                     EEAEKLKEQLEEVGATVELK"
     gene            23516..24124
                     /locus_tag="OY092_000211"
     CDS             23516..24124
                     /locus_tag="OY092_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1075187.1"
                     /translation="MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYG
                     SDVLVQTFLKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEK
                     NKKINGIDNAIVKESDALSAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGE
                     LFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYYILRSIKA"
     gene            24339..27890
                     /gene="rpoB"
                     /locus_tag="OY092_000212"
     CDS             24339..27890
                     /gene="rpoB"
                     /locus_tag="OY092_000212"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HCX1075188.1"
                     /translation="MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYEWFLREG
                     LIEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKE
                     TGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDA
                     TIIPNRGAWLEYETDAKDVVYVRIDRTRKLPLTVLLRALGFSSDQEIVDLLGDNEYLR
                     NTLEKDGTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTN
                     KKLHLKHRLFNQKLAEPIVNTETGEIVVEEGTVLDRRKIDEIMDVLESNANSEVFELH
                     GSVIDEPVEIQSIKVYVPNDDEGRTTTVIGNAFPDSEVKCITPADIIASMSYFFNLLS
                     GIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTESITPQQLINI
                     RPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYS
                     HYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDLDTHAITDQIDYLTAD
                     EEDSYVVAQANSKLDENGRFMDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATAC
                     IPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVE
                     HVESNEILVRRLVEENGVEHEGELDRYPLAKFKRSNSGTCYNQRPIVAVGDVVEYNEI
                     LADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEA
                     RDTKLGPEEITRDIPNVSESALKNLDDRGIVYIGAEVKDGDILVGKVTPKGVTELTAE
                     ERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIV
                     QKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVL
                     ELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRI
                     SVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
                     AYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGLDVKVMD
                     EQDNEIEMTDVDDDDVVERKVDLQQNDAPETQKEVTD"
     gene            28054..31650
                     /gene="rpoC"
                     /locus_tag="OY092_000213"
     CDS             28054..31650
                     /gene="rpoC"
                     /locus_tag="OY092_000213"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HCX1075189.1"
                     /translation="MKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFG
                     PTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIP
                     SRMGLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAK
                     MGAEGIKDLLEEIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMI
                     LDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEK
                     RMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSV
                     IAVGPSLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVL
                     EEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHV
                     PLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFN
                     NTNEVLKAYANGFVHLHTRIGVHASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSF
                     AYINEPTQENLERKTPNRYFIDPTTLGEGGLKEYFENEELIEPFNKKFLGNIIAEVFN
                     RFSITDTSMMLDRMKDLGFKFSSKAGITVGVADIVVLPDKQQILDEHEKLVDRITKQF
                     NRGLITEEERYNAVVEIWTDAKDQIQGELMQSLDKTNPIFMMSDSGARGNASNFTQLA
                     GMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRR
                     LVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEII
                     IRPDELITPEIAKKITDAGIEQMYIRSAFTCNARHGVCEKCYGKNLATGEKVEVGEAV
                     GTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGV
                     VEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNYL
                     SVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSL
                     VDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAI
                     KGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVESQTEVTE"
     gene            31787..32041
                     /locus_tag="OY092_000214"
     CDS             31787..32041
                     /locus_tag="OY092_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HCX1075190.1"
                     /translation="MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLM
                     TRVLSQINQKNIPVSFFKSKHALGKHVGINVNATIVALIK"
     gene            32139..32552
                     /gene="rpsL"
                     /locus_tag="OY092_000215"
     CDS             32139..32552
                     /gene="rpsL"
                     /locus_tag="OY092_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HCX1075191.1"
                     /translation="MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKD
                     LPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN"
     gene            32618..33088
                     /gene="rpsG"
                     /locus_tag="OY092_000216"
     CDS             32618..33088
                     /gene="rpsG"
                     /locus_tag="OY092_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HCX1075192.1"
                     /translation="MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILY
                     SAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW"
     gene            33211..35292
                     /gene="fusA"
                     /locus_tag="OY092_000217"
     CDS             33211..35292
                     /gene="fusA"
                     /locus_tag="OY092_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HCX1075193.1"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETH
                     EGASQMDWMEQEQDRGITITSAATTAAWEGHRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAA
                     PIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHLDRAEEARASLIEAV
                     AETSDELMEKYLGDEEISVSELKEAIRQATTNVEFYPVLCGTAFKNKGVQLMLDAVID
                     YLPSPLDVKPIIGHRASNPEEEVIAKADDSAEFAALAFKVMTDPYVGKLTFFRVYSGT
                     MTSGSYVKNSTKGKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKDTGTGDTLCGE
                     KNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVII
                     GGMGELHLDIKVDRMKKEFNVECNVGAPMVSYRETFKSSAQVQGKFSRQSGGRGQYSD
                     VHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKL
                     YDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVT
                     SRRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSI
                     AEDIIKKNKGE"
     gene            35509..36693
                     /gene="tuf"
                     /locus_tag="OY092_000218"
     CDS             35509..36693
                     /gene="tuf"
                     /locus_tag="OY092_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCX1075194.1"
                     /translation="MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDSVA
                     QSYDMIDNAPEEKERGITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGG
                     ILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSE
                     YDFPGDDVPVIAGSALKALEGDAQYEEKILELMEAVDTYIPTPERDSDKPFMMPVEDV
                     FSITGRGTVATGRVERGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIG
                     ALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFR
                     TTDVTGVVHLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEI
                     IK"
     gene            complement(36975..38150)
                     /locus_tag="OY092_000219"
     CDS             complement(36975..38150)
                     /locus_tag="OY092_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCX1075195.1"
                     /translation="MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLS
                     QLSCDIETPIGRNGIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHAC
                     GHDGHTAILLTVAEILDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIY
                     GTHLWSGYPTGTIHSRAGAIMASPDEFSVTIKGRGGHGAKPHETIDPIVIMAEFILSA
                     QKIISRTIDPVKQAVLSFGMIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKL
                     LQGLAIANDINYDLNYIKGYLPVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSH
                     YLKVRPGAFFLTGCGNESKGITAPHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN"
     gene            38321..39508
                     /locus_tag="OY092_000220"
     CDS             38321..39508
                     /locus_tag="OY092_000220"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HCX1075196.1"
                     /translation="MVQSLHEFLEENINYLKENGLYNEIDTIEGANGPEIKINGKSYI
                     NLSSNNYLGLATNEDLKSAAKAAIDTHGVGAGAVRTINGTLDLHDELEETLAKFKGTE
                     AAIAYQSGFNCNMAAISAVMNKNDAILSDELNHASIIDGCRLSKAKIIRVNHSDMDDL
                     RAKAKEAVESGQYNKVMYITDGVFSMDGDVAKLPEIVEIAEEFGLLTYVDDAHGSGVM
                     GKGAGTVKHFGLQDKIDFQIGTLSKAIGVVGGYVAGTKELIDWLKAQSRPFLFSTSLA
                     PGDTKAITEAVKKLMDSTELHDKLWDNAQYLKNGLSKLGYDTGESETPITPVIIGDEK
                     TTQEFSKRLKDEGVYVKSIVFPTVPRGTGRVRNMPTAAHTKDMLDEAIAAYEKVGKEM
                     KLI"
     gene            39775..40653
                     /gene="hchA"
                     /locus_tag="OY092_000221"
     CDS             39775..40653
                     /gene="hchA"
                     /locus_tag="OY092_000221"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HCX1075197.1"
                     /translation="MSQDVNELSKQPTPDKAEDNAFFPSPYSLSQYTATKTDFDGVEH
                     KGAYKDGKWKVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLS
                     GYPVKLELWAMPTEDEAVISTYNKLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGH
                     AAVVGISESEDVQQTLDWALDNDRFIVTLCHGPAALLSAGLNREKSPLEGYSVCVFPD
                     SLDEGANIEIGYLPGRLKWLVADLLTKQGLKVVNDDMTGRTLKDRKLLTGDSPLASNE
                     LGKLAVNEMLNAIQNK"
     gene            40811..42448
                     /locus_tag="OY092_000222"
     CDS             40811..42448
                     /locus_tag="OY092_000222"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HCX1075198.1"
                     /translation="MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELN
                     GLKIPYTYALQNSNDYLEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIIFTDENLN
                     PVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
                     IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFD
                     KIDPKLSKVIQDKVSAPVVNIGEVVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGI
                     GSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFE
                     YVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLT
                     GCIFGLTLQTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMM
                     DIYANVLNKKLIVMDSEYAPAIGAAILGAVSGGAHNSINDAVDAMKEPILYEINPEAE
                     KVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG"
     gene            42662..43627
                     /locus_tag="OY092_000223"
     CDS             42662..43627
                     /locus_tag="OY092_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HCX1075199.1"
                     /translation="MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPV
                     QNGPFEILDVTDRDRMFELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNAL
                     EAARTYNLHFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRF
                     GVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDA
                     IEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIA
                     NSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN"
     gene            43962..45038
                     /locus_tag="OY092_000224"
     CDS             43962..45038
                     /locus_tag="OY092_000224"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HCX1075200.1"
                     /translation="MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDAEKGWH
                     DLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKKDGEVALFRPEENFKRLNNSLARLE
                     MPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLII
                     LSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQ
                     VLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVE
                     ERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLY
                     DVYTGIQNGTLEDKNGWRVVVPKY"
     gene            45288..45971
                     /locus_tag="OY092_000225"
     CDS             45288..45971
                     /locus_tag="OY092_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1075201.1"
                     /translation="MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALR
                     QLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVE
                     GVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNAISLFDLIISTEADAYEKPNPKV
                     LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNS
                     AADILEALN"
     gene            complement(46087..46749)
                     /locus_tag="OY092_000226"
     CDS             complement(46087..46749)
                     /locus_tag="OY092_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HCX1075202.1"
                     /translation="MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEH
                     NPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHE
                     EEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD
                     PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVD
                     TR"
     gene            complement(46742..47359)
                     /locus_tag="OY092_000227"
     CDS             complement(46742..47359)
                     /locus_tag="OY092_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HCX1075203.1"
                     /translation="MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSD
                     FYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVSDYHIHKNKIFAKNTLSSVEFQK
                     FSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDYREY
                     YESLQSNGSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDITNE"
     gene            47426..47896
                     /locus_tag="OY092_000228"
     CDS             47426..47896
                     /locus_tag="OY092_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HCX1075204.1"
                     /translation="MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLR
                     ETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA
                     DDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN"
     gene            48043..48912
                     /locus_tag="OY092_000229"
     CDS             48043..48912
                     /locus_tag="OY092_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCX1075205.1"
                     /translation="MIKLIATDMDGTLLNAAHEISQPNIDAIKYAQEQGITVVIATGR
                     AFYEAQAPVADTDLTVPYICLNGAEVRDETFNVMSTSHLNKSLVHKITNVLKDAGIYY
                     QVYTSRAIYTEDPQRDLDIYIDIAERAGQHANVERIKNGIQRRIDNGTLKVVDNYDAI
                     ENIPGELIMKILAFDGNLEKIDKASKILAESPNLAISSSSRGNIEITHSDAQKGIALE
                     TIAERLGIEMKDVMAIGDNLNDLSMLEKVGYPVAMENGAEEVKKIAKYVTDTNENSGV
                     GKAIMKLLREQQV"
     gene            48933..49499
                     /locus_tag="OY092_000230"
     CDS             48933..49499
                     /locus_tag="OY092_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HCX1075206.1"
                     /translation="MKGLIIIGSAQVNSHTSALARYLTEHFKTHDIEAEIFDLAEKPL
                     NQLDFSGTTPSIDEIKQNMKDLKEKAMAADFLILGTPNYHGSYSGILKNALDHLNMDY
                     FKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDFAKNEDGSYYLN
                     DSEFQLRARLFVDQIVSFVNNSPYEHLK"
BASE COUNT        17898 a         7238 c         9569 g        15072 t
ORIGIN      
        1 tatgtctggt gactatagca aggaggtcac acctgttccc atgccgaaca cagaagttaa
       61 gctccttagc gtcgatggta gtcgaactta cgttccgcta gagtagaacg ttgccaggca
      121 aaaatggatg cgatgagccg cattgagacc gtaaggtctc tttttttatg tctaaaacgt
      181 caaaataaaa gttaacacaa agaaaaatgg cttggcgaag tgaaaacgtt tgaatctgac
      241 gaaacgagaa aagagcgcaa cgagtttagt agagctaaat gagtaagcga gagccgaaga
      301 agaggaaaga agcaagcgat tgtcacaagt caagaaaggt tcttagcgag gatggtagcc
      361 aacttacgtt ccgctagagt agaacgttgc caggcaaaaa atggatgcga tgagccgcat
      421 tgaaatgctc ccttcaaagt agacatagat gtactgctat atatgtttca agaatatgaa
      481 aaaagcgtgt cgtttcaata cctaatcgat acattacaat tagatattaa tgtcaatact
      541 ttgtatccta agtataaata ttataaaacc catggtggaa atgataattt aataatgtgc
      601 acttttgatt gtctaagtat gtacaacttt aattttgtgt ttatataaat ttaaaatgat
      661 atcatcgaaa acaaaatatt gtataaatag agaagagcag taagacggta tctaattgaa
      721 aatgatctta ctgctctttt atatacttta ttgaaataca aaaaggaaat taattattat
      781 acaatagaca agctattgca taagtaacac taacttttat caaagaagtg ttactttata
      841 attaatgttt ttattagagc gtctacatgc ggttttaaag catcatcgtc tataccgcca
      901 aagcctaata taaatttagg ggttttctta tagtcttggt catcatcaaa attataaact
      961 tgtaatttta actttacttt atttgctcta tcaagacact cttgtaatgt taatccattt
     1021 tttactgtaa ttgtaaaatg catacctgtt tcagcacctt gaatatcaag ttgctctttg
     1081 tatggcttca atctttttaa aatataggtt agttttctac gataaattcg tctcatttta
     1141 tttaaatgcc tttcaaaacc accggaagat ataaacgttg caataaggtt ttgcatatga
     1201 acaggtacag tgttgccttc aatgtgattt tgagaatgat attttttcat tatagaatag
     1261 ggtaacacca tatatgcaac acgacagcta ggaaaaatag actttgaaaa tgtactgata
     1321 taaatcactt tttctcctct tgaatataga ccttgtattg ctggaatggg tttaccgaaa
     1381 tatctaaact cagaatcata atcatcttct ataataaatc gttcttcttt ttcttgagcc
     1441 cattgtatta attgagttcg cttttttaag tccatcacat atccagttgg aaattgatgg
     1501 gaaggcgtta tatatactat atttttttgt gatttaataa cttcatctac gtttattcca
     1561 ttatcttcaa cttcaatttg ttcatattca acttgttttt tatctaaaat atttttgatt
     1621 ggtggataac taggtttttc gataataaac gttgaagtat aaagtaaatc gactaattga
     1681 tttactaatt gttcggtaga tgagccaatt ataatttgat taggatcaca aattacacca
     1741 cgattagtaa ataaataaaa tgccagttga aatcttaaat gtaattctcc ttgaaaatgt
     1801 cctctacgta attggttcaa atgatttgta tcataaagat ctttggaata ctttctgaaa
     1861 agttctatag ggaaatgttt cgtatctatt tcatccaaat taaaagcata atcataagct
     1921 tcatcactcg cttttggttt atatgaatca tcatcaaaaa gagaggggat aggttgattg
     1981 tttaaaattg ttaaagattc aatttcggac acaaaatatc cagagcgagg tcttgaataa
     2041 atgtaacctt catctaatag aagttgatat gcatgttcta cggttgtttg gctgatagat
     2101 aaatgtttgc ttaattgtct tttagaataa aatttatcac cttctttaaa ttgaccttca
     2161 attatttgtt tttttaattt ttcataaagt tgatggtata aagtgttttt caattttata
     2221 actgacctcc taaatttgtc ttattttgta cctttttaaa tatcagttta tacattacaa
     2281 tgtatttaat caacttgaaa aggggtttta tgtataatga gtaaaattat tggatcagac
     2341 agagtcaaaa gaggtatggc tgaaatgcaa aaaggcggcg ttattatgga tgtcgttaat
     2401 gctgagcaag caagaattgc agaagaagct ggcgcggtag cagttatggc attagaacga
     2461 gtaccttctg atattagagc tgctggtggc gttgcacgta tggcaaaccc taaaattgta
     2521 gaagaagtaa tgaatgctgt ttctattcca gtcatggcta aagcacgtat tggtcatatc
     2581 actgaagcaa gagtattaga ggcgatgggt gttgactata ttgatgaatc agaagtgtta
     2641 acaccagcag atgaggaata tcacttaaga aaagatcaat ttacagtacc atttgtatgt
     2701 ggatgtcgta atttaggtga agctgcgcgt agaattggtg aaggtgctgc tatgttacgt
     2761 actaaaggtg aaccaggtac aggtaatatt gttgaagctg taagacatat gagacaagtt
     2821 aattcagaag ttagtcgatt gactgtaatg aatgatgatg agattatgac tttcgcgaaa
     2881 gatatcggtg cgccttatga aattttaaaa caaattaaag acaatggtcg tttaccggta
     2941 gttaactttg cagctggtgg cgttgcgact cctcaagatg ctgctttaat gatggaatta
     3001 ggtgccgatg gtgtattcgt tggatcaggt atttttaaat cagaagatcc agaaaaattt
     3061 gctaaagcaa ttgttcaagc aacaacacat taccaagact atgaactaat tggaagatta
     3121 gcaagtgaac ttggcactgc tatgaaaggt ttagatatca atcaattatc attagaagaa
     3181 cgtatgcaag agcgtggttg gtaagatatg aaaataggtg tattagcatt acaaggtgca
     3241 gtacgtgaac atattagaca tattgaatta agtggtcatg aaggtattgc agttaaaaaa
     3301 gttgaacaat tagaagaaat cgagggctta atattacctg gtggcgagtc tacaacgtta
     3361 cgtcgattaa tgaatttata tggatttaaa gaggctttac aaaattcaac tttacctatg
     3421 tttggtacat gcgcaggatt aatagttcta gcgcaagata tagttggtga agaaggatac
     3481 cttaacaagt tgaatattac tgtacaacga aactcattcg gtagacaagt tgacagcttt
     3541 gaaacagaat tagatattaa aggtatcgct acagatattg aaggtgtctt tataagagcc
     3601 ccacacattg aaaaagtagg tcaaggcgta aatatcctat gtaaggttaa tgagaaaatt
     3661 gtagctgtcc agcaaggtaa atatttaggc gtatcattcc atcctgaatt aacagatgac
     3721 tatagagtaa ctgattactt tattaatcat attgtaaaaa aagcatagct taatgtatgc
     3781 taaatcaacg aattattgat atttatagat ttgttgagaa gacaatatct ccttcaaact
     3841 tagctttgga ggagttgttt tttatgtcaa aattaaaaat gataaaaaat aaagatatac
     3901 ataagaaaaa accccttcaa agacactgag aatagtcaaa attttgaagg ggttaattcg
     3961 atgttgatgt atttgttaaa taaagaatcc agcgattgca gctgaaatga aagatactag
     4021 tgttgcaccg aataataatt tcaaaccaaa gcgggcaact gtatctcctt ttttgtcatt
     4081 aagagattta atcgcacctg aaataatacc aatagagcta aaattagcaa atgatactaa
     4141 gaatacagat gtaacacctt ttgcgtgttc agataaatca ctaagtttac cgagtgcttg
     4201 cattgctaca aattcgttag ataatagttt tgtcgccata actgaaccgg cttgaactgc
     4261 atcttgccat ggcacaccga ctaagaatgc aaatggtgca aagacaaaac caattaatgt
     4321 ttggaaatcc caagaaatag cgccacctga aactgtacta aagatattgc ttacaattcc
     4381 atttaataga gcgataatag caatgtatcc gattaacatt gcgcctacaa tgacagctac
     4441 tttaaatcca tctaaaatat attctcctag catttcgaag aatgattgtt gtctttcttc
     4501 agtttcttca actaataatt tgtcatcttc ttcattaact ttataagggt taataattga
     4561 agcgatgatg aaaccaccaa ataagtttaa gacaacagcc gttacaacat atttaggttc
     4621 aattaaggta aagtatgcac cgataattga agcagaaaca gtcgacattg ctgaagctgt
     4681 taatgtgtat aaacgttgct taggtatgta tggtaattgt tttttaattg aaataaatac
     4741 ttcagattgt cccaaaattg ctgcagcaac tgcattgtat gattctaaac gtcccatacc
     4801 attaatttta gaaattaaga atcctaaaac attaatgatt aaaggtaaaa tctttgtgta
     4861 ttgaaggata ccgataatcg ctgaaataaa tacgataggt aataatacac tgaagaagaa
     4921 tggtggttgc ttaggatcga tatattgaat accaccgaat acaaagttaa caccatctgc
     4981 tgcttttaat aataagtagt taaaaccgtt tgaaatacca ccaataacct tgattcccat
     5041 tgtagtttta agcaagataa atgcaaagat aagctgaatt gcaagtaaaa ttcctacata
     5101 tttccagcga atatttttcc tgtctgagct aaatagaaac gcaagtgcta aaaagaagat
     5161 aattccgata atcccaatta gaatatgcat atatttctca ttcctttagt tttttctaca
     5221 atctatcata caataaaatg gaagggctaa catcataaat ttttgaaaat ataaaaacaa
     5281 attaattgaa aaaggtcaaa ataggtcata taatatagtc aaagaaggtc aaaaaggggt
     5341 gatatacatg cacaatatgt ctgacatcat agaacaatac atcaaacgtt tatttgaaga
     5401 gtcgaatgaa gatgtcgttg aaattcagag agcgaatatc gcacagcgct ttgattgtgt
     5461 accatcacaa ttaaattatg taatcaaaac acgattcact aatgaacatg gttatgaaat
     5521 cgaaagtaaa cgtggtggtg gtggttacat ccgaatcact aaaattgaaa ataaagatgc
     5581 aacaggttat attaatcatt tgcttcagct gattggacct tctatttctc aacaacaagc
     5641 ttattatatt attgatgggc ttttagataa aatgttaata aatgaacgtg aagctaaaat
     5701 gattcaagca gttattgata gagaaacgct atcaatggat atggtttcta gagatattat
     5761 tagagcaaat attttaaaac gtttgttacc agttataaat tattactaaa tgaaatgagg
     5821 tgttgaagtg ctttgtgaaa attgtcaact taatgaagcg gaattaaaag ttaaagttac
     5881 aagtaaaaat aaaacagaag aaaaaatggt gtgtcaaact tgtgctgagg ggcaccatcc
     5941 gtggaatcaa gctaatgaac aacctgaata tcaagaacat caagataatt tcgaagaagc
     6001 atttgttgtt aagcaaattt tacaacattt agctacgaaa catggcatta attttcaaga
     6061 agtagcgttt aaagaagaaa aacgttgccc atcatgtcat atgactttga aagatattgc
     6121 acatgttggt aaatttgggt gtgctaattg ttatgcaaca tttaaagatg acatcattga
     6181 tatcgtccgc agagttcaag gtggacaatt tgagcacgtt ggaaagacac cacattcttc
     6241 acataaaaag atagctttaa agcgaaaaat cgaagaaaag aatgaatatt tgaaaaaact
     6301 tattgaaatc caagattttg aggaagcagc cattgttaga gatgaaatta aagcactaaa
     6361 agctgagagt gaggtgcaac atgatgacgc ataatattca tgataatatc agccaatgga
     6421 tgaaaagtaa tgaagaaaca cccattgtta tgtcttctag aattcggtta gcgcgtaatt
     6481 tagaaaatca tgtgcatcca ctaatgtatg ctactgaaaa tgatggattt agagttataa
     6541 atgaggtaca agatgccttg ccaaattttg aattaatgcg tcttgatcaa atggatcaac
     6601 aaagtaaaat gaagatggtt gcaaagcatt tgattagtcc tgaactaata aaacaaccag
     6661 cagccgcagt attagtgaat gatgatgaat ctttaagtgt catgataaat gaagaggacc
     6721 atattcgtat tcaagctatg ggaactgaca cgacattaca ggctttatat aatcaagctt
     6781 catcaattga tgatgaatta gataaaagcc ttgatataag ttatgatgaa caacttggtt
     6841 atttaactac atgtcctacc aatataggta ctggtatgag agcaagcgtg atgctacatt
     6901 taccaggtct atctattatg aaaagaatga cacggattgc tcaaaccatt aatcgttttg
     6961 gatatacaat cagaggtatt tacggtgaag gttcgcaagt ttatggacat acttatcaag
     7021 tatccaacca acttacactt ggtaaatctg agttagaaat catagaaaca ttaacagaag
     7081 ttgttaatca aatcattcat gaagaaaaac aaatacgaca aaagttagac acttataatc
     7141 aattagaaac acaagaccgt gtttttcgct cgctaggtat tttacaaaac tgtagaatga
     7201 taactatgga agaggcttct tatagattaa gcgaagttaa acttggtata gatttaaatt
     7261 acattgaatt acaaaacttt aaatttaatg aattgatggt agctatacag tcaccatttt
     7321 tattagatga agaagatgac aaatctgtaa aagaaaaacg agcagatata ctaagagaac
     7381 atataaagta ggaggtcatt atttatgtta tttggtagat taactgagcg tgcacagcgc
     7441 gtattagcac atgcacaaga agaagcaatt cgtttaaatc attcaaatat aggaacagaa
     7501 cacctattat tgggattaat gaaagaacct gaaggaattg ctgcaaaagt attagaaagt
     7561 tttaatatca ctgaagataa agtaattgaa gaagttgaaa aattaatcgg acatggtcaa
     7621 gatcatgttg gtacattgca ttatacacct agagctaaaa aagtcattga attatcgatg
     7681 gatgaagcta gaaaattaca tcacaatttt gttggaacgg aacatatttt attaggcttg
     7741 attcgtgaaa atgaaggtgt tgcagcaaga gtttttgcaa atctagattt aaatattact
     7801 aaagcacgtg cacaagttgt gaaagcttta ggaaaccctg aaatgagtaa taaaaatgca
     7861 caagctagta agtcaaataa tactccaact ttagatagtt tagctcgtga cttaacagtc
     7921 attgccaaag acggtacatt agatcctgtt ataggacgtg ataaagaaat tacacgtgta
     7981 attgaagtat taagtagacg tacgaaaaac aatcctgtgc ttattggaga gccaggtgtt
     8041 ggtaaaactg ctattgctga aggtttagcg caagccatag tgaataatga ggtaccagag
     8101 acattaaaag ataaacgtgt tatgtcttta gatatgggaa cagtagttgc aggtactaaa
     8161 tatcgtggtg aatttgaaga gcgtctgaaa aaggttatgg aagaaatcca acaagcaggt
     8221 aatgtcatcc tatttattga tgagttgcat actttagttg gtgctggtgg tgctgaaggt
     8281 gctatcgatg cttcgaatat tttgaagccg gcattagcac gtggtgaatt acaatgtatt
     8341 ggtgctacta cattagatga atatcgcaaa aatattgaaa aagacgcggc tttagaacgt
     8401 cgtttccaac ctgtacaagt tgatgaacct tcagtagtag atacagttgc tattttaaaa
     8461 ggattaagag atcgttacga agcacaccat cgtattaata tttcagacga agctattgaa
     8521 gcagctgtta aattaagtaa cagatacgtt tcagatcgtt tcttaccaga taaagcaatt
     8581 gatttaattg atgaagcaag ttctaaagta agacttaaga gtcatacgac acctaataat
     8641 ttaaaagaaa ttgaacaaga aattgaaaaa gttaaaaatg aaaaagatgc cgcagtacat
     8701 gctcaagagt ttgaaaatgc tgctaacctg cgtgataaac aaacaaaact tgaaaagcaa
     8761 tatgaagaag ctaaaaatga atggaagaat gcacaaaatg gcatgtcaac ttcattgtca
     8821 gaagaagata ttgctgaagt tattgcagga tggacaggta tcccattaac taaaatcaat
     8881 gaaacagaat ctgaaaaact tcttagtcta gaagatacat tacatgagag agttattggg
     8941 caaaaagatg ctgttaattc aatcagtaaa gcggttagac gtgcccgtgc agggttaaaa
     9001 gatcctaaac gaccaattgg tagctttatc ttccttggac caactggtgt tggtaaaact
     9061 gaattagcta gagctttagc tgaatcaatg tttggcgatg atgatgcgat gatccgtgta
     9121 gacatgagtg aatttatgga aaaacacgca gtgagccgat tagttggtgc tcctccagga
     9181 tatgttggtc atgatgatgg tggacaatta actgaaaaag ttagacgtaa accgtattct
     9241 gtaattttat ttgatgaaat tgaaaaagca catccagatg tatttaatat tctattacaa
     9301 gttttagatg acggacattt gacagataca aaaggacgta cagttgattt cagaaataca
     9361 attatcataa tgacatcaaa cgttggagca caagaattac aagatcaacg atttgctgga
     9421 ttcggtggtt caagtgatgg acaagattat gaaacaattc gaaaaacgat gttaaaagaa
     9481 ttaaaaaatt cattccgtcc agaattttta aaccgtgtag atgatatcat tgtattccat
     9541 aaactaacaa aagaagaatt aaaagaaatt gtaacaatga tggttaataa attaacaaat
     9601 cgattatctg aacaaaacat aaatattatt gttactgata aagcgaaaga caaaatcgca
     9661 gaagaaggat atgatccaga atatggtgca agaccattaa ttagagcgat acaaaaaact
     9721 atcgaagata atttaagtga attaatatta gatggtaatc aaattgaagg taagaaagtt
     9781 acagtagatc atgatggtaa agagtttaaa tatgacattg ctgaacaaac ttcagaaact
     9841 aaaacaccat cgcaagcata attataaaac agtccaaaac aaattaaagt tttgggctgt
     9901 ttttttagta gcattgaact atagaaattc gtgaaagtat ccatcaacga aacaatctaa
     9961 taaaataatc atcaaaggat agttaagaat tatatgaaac aagttaatga gcctacagcg
    10021 atagcataaa ggtatgaatt tttataaagg ttttttgttt gaagatacta gcaacttacg
    10081 tcaaaataaa ataggtctat ataatattgt gataaatcta gagaaaagag tttactaaga
    10141 aattattaag attttatctt tgaaagatac cgactatcaa catgatgtaa gtttatttta
    10201 taatattcat aaaaaataaa tctgataaaa cagtttgcgt tagtagtcat gttaaaatac
    10261 aaacaaatgt aactcacatt taatttgtca taatgggaat gtgcgtttaa aatagatttg
    10321 ttcaaaggaa agtggaggtg caattttggc caagaaaaaa gtgatttttg aatgtatggc
    10381 ttgtggttat caatctccta aatggatggg gaaatgtcct aattgtggcg cttggaatca
    10441 aatggaggaa attgttgaaa aagcagccaa tcctaaacat ggagtgaaaa ccaaggaatt
    10501 agcaggtaaa gtacaaaaat taaatagtat taaacatgaa acaacgccga gagtgttaac
    10561 agattcagca gaattcaacc gcgtattagg tggaggtatt gtgagcggat cgttagtact
    10621 tattggtggg gatccaggta ttggtaagtc aacgttactt ttacaaattt gtgcatcgtt
    10681 atctcaaaag aaaaaagtac tatatattac tggagaagaa tcgcttagtc agactaaatt
    10741 acgtgcagag cgattagatg aagattcaag tgaattgcaa gtattagctg aaacagatct
    10801 tgaagttatt tatcaaacag taaaagaaga acaacctgat ttactagtag tggattcgat
    10861 tcaaacaata tatcatcctg aaatcagctc tgcgccaggt tctgtttcac aagttcgtga
    10921 aagtacacaa agtttaatga atattgctaa acaaatgaac attgcaactt ttatagtggg
    10981 tcatgtaacg aaagaaggtc aaattgctgg cccaagattg ctagaacaca tggttgatac
    11041 tgtgctttat tttgaaggcg atgaacacca cgcatatcga attttgcgag ctgttaaaaa
    11101 ccgttttggt tcaacgaatg aaatgggaat cttcgaaatg aagcaaagtg gattaaaagg
    11161 tgtaaataat ccatctgaaa tgtttttaga agaacgttca acaaatgttc caggttcaac
    11221 aattgttgca accatggagg gaaccagacc acttttaata gaagttcaag cgctggtaac
    11281 tccaacgact tttaacaatc cgagacgaat ggcaacaggg attgatcata atcgattaag
    11341 tttgttgatg gctgttttgg aaaagaaaga aaattatcta ttacaacaac aagatgctta
    11401 tatcaaagta gctggcggtg taaagttaac ggagccagca gttgatttaa gtgtaattgt
    11461 agcaactgcg tctagcttta aagatgaagc tgtcgacgga ttagattgct atattggaga
    11521 agttggttta acgggtgagg tacgtcgtgt atctcggata gaacaacgcg tgcaagaggc
    11581 tgcaaaacta ggtttcaaac gtgtaattat tcctaaaaat aatataggcg gatggacata
    11641 tcctgaaggt atacaagtaa taggtgtaac tactgtacat gaagcattgt catttgctct
    11701 tcattcataa aacatcaaga aaggaggaca ttgtgtgaat atcgttaaac taatggttat
    11761 tattatttac ttaattattg ggagcgcatt aggaataatt attattcctg aaattgcaaa
    11821 tgatcttgga ttacaaaact ccagcttttt aaaaaatcac tatgtagatg gcattatcgg
    11881 tagtattttt atgttcttaa tttttggtgt atttattaga cgagttacta acgctataaa
    11941 aggtttagaa cattttatta tgcgtagaag tgctgttgaa atactatttg caacaatagg
    12001 tttaataatc ggattactta tttctgttat ggtgtcgttt atattagaat caattggcaa
    12061 ctctattttt aatcatttca ttcctgtcat aattacgata ttactatgtt atttcggttt
    12121 ccaatttggc cttaaaaaac gagatgaaat gttaatgttt ttacctgaga atatagcgcg
    12181 ttccatgtca caacatacta aaagtgctac gccaaaaatt atcgacacaa gcgcaattat
    12241 tgatggtcgt attttagaag tcattcgttg cggttttatc gatggcaata ttttaattcc
    12301 acaaggtgtt attaatgaat tacaaattgt tgcagattca aatgacagtg ttaaacgtga
    12361 aaagggtaaa agaggcttag atattttaaa tgaattgtat gatttagatt atcctacaaa
    12421 agtcatacat ccaactaaaa cacatagtga tattgataca atgttattaa agctagctaa
    12481 acaatatcat gcaagtatta ttacgacaga tttcaaccta aataaagttt gtcatgtaca
    12541 tggtatcaaa gcattaaatg ttaatgattt atcagaagca atcaaaccta atgtacatca
    12601 aggtgatcaa ctgcatattt tactgacaaa aatgggtaaa gagcctggtc aggcagtagg
    12661 atatctagat gatggtacga tggtagttgt tgataatgct aaaaatctta ttggcagtca
    12721 tgtcaattta gaagtagtca gcttattgca aacatcttca ggaagaattg tttttgctaa
    12781 aaaaatcgaa gatacagtat cattataaaa actgtagttg acgaaaacaa aatagatatt
    12841 aaaaggtata tgaaatggcg aagtttgtaa tttgaagtat aactataaat aaatgcaaaa
    12901 cataatagtt atcaaaaaat acaaatagtg ctaatatatc attgaaacaa gttcattaag
    12961 tgttaaattt tagatattaa taaagttatt cttatagcaa tcaagacata caaaattaga
    13021 atcaatttta acgtatttga atagttaatt tgaagtttaa tttcacagta cataatattc
    13081 atttttaagt cgttgaaatg tttatgtagt gcagtcttga ttcttaggga tagctttttt
    13141 aaagtgttga aaaaacaact gctttctatt taaaatttaa gcatattacc cagggaatta
    13201 tgttatgatt gaacaatgaa attattttaa ggtcatgtta aaaagcattg tttcgtttta
    13261 acaataagac gagttagaca tttgttatga cggtcgaaga tagcaaatga acaatttata
    13321 tgaactaact tgaaaatctg atatttaatt taggagtgaa aaaaatgagc gatcgtataa
    13381 gagtaagata tgcaccaagt ccaactggtt atcttcatat tggtaatgca agaacagcat
    13441 tattcaatta cttgtatgct aaacattaca acggagattt tgtgattcga attgaagata
    13501 ctgataaaaa acgtaattta gaagatggag aaacatcaca atttgataat cttaaatggt
    13561 taggattaga ttgggatgag tctgtagata aagacaatgg ctacggacca tatcgtcaat
    13621 ctgaacgtca acatatctac caaccattaa tagatcagtt actagcagaa gataaagcat
    13681 ataaatgcta tatgacagaa gaagaattag aagctgaacg tgaagcgcaa atcgctcgtg
    13741 gtgaaatgcc tcgctatggt ggtcaacatg cgcatttgac tgaagaacaa cgtcaacaat
    13801 ttgaagcaga aggacgccaa ccatcaattc gtttccgagt acctcaaaac caaacgtatt
    13861 catttgatga tatggtaaaa ggaaatattt catttgattc aaatggtatt ggtgactggg
    13921 ttatcgtaaa aaaagatggc attccaacgt acaattttgc agtagctata gatgatcatt
    13981 acatgcaaat ttcagatgta attcgtggtg atgatcatat ttcaaacacg cctaaacaaa
    14041 ttatgattta tgaagcattt ggctgggagc cacctcgttt tggtcatatg tcattaattg
    14101 ttaatgaaga acgtaaaaag ttaagtaaac gtgatgggca aattttacaa tttattgagc
    14161 aatatcgtga cttaggttat ttacctgaag cgttatttaa ttttattgcg ttattaggtt
    14221 ggtctcctga aggtgaagaa gaaatctttt ctaaagaaga atttatcaaa atctttgatg
    14281 aaaagcgttt gtcaaaatca ccagcatttt tcgataagca aaaattagca tgggttaata
    14341 accaatatat gaaacaaaaa gatactgaaa cagtattcca attagcatta cctcatttaa
    14401 ttaaagcaaa tttgattcct gaggtgccgt cagaagagga tttatcttgg ggacgcaaat
    14461 taattgcgct ttatcaaaaa gaaatgagtt atgccggtga aattgtacct ttatcagaaa
    14521 tgttctttaa agaaatgcca gctcttggtg aagaagaaca acaagtgatt aatggagagc
    14581 aagtaccaga gttaatgacg cacttattca gtaaattaga agtacttgaa ccatttgaag
    14641 cggctgaaat taaaaagaca attaaagaag ttcaaaaaga aacaggaata aaaggcaagc
    14701 aattatttat gcctattcgt gttgctgtaa caggccaaat gcatggtcct gaattaccaa
    14761 atacaattga agtacttggt aaagaaaaag tgctaaaccg tttaaaacaa tataagtaat
    14821 gaaatagaca agatcaaggt agtatatact tgaattttat aacgtaacca catatgataa
    14881 agttgtatta acaaattaca acaatatgaa taaagtattt tatataaaac gaaggattag
    14941 taattaaatt tatacgatgc agagagtgta cggttgctgt gagtacaacg tagaaattaa
    15001 tgaatgcacc ttcgtaaaat gaattaaata tataatgaga gtgatgagca ttaagttgac
    15061 ttagtttcct tgataatttg gaagcgcccg caatattatt aatgttattc gctaaattca
    15121 gagtggaacc gtgcggaagc gcctctaaca atacaatttg tatgttagtg gtgctttttt
    15181 gatatttaat ttcgcaggta cttcaattat gtatttacgt agttcaatca ttgaggagga
    15241 aatgatcttg ttaaaaagaa tgagagacga tataaaaatg gtatttgagc aggatccagc
    15301 ggcacgttca acattagaag tcattacaac gtatgcaggt ttacatgcag tttggagtca
    15361 tttgattgca cataagttat acaaccaaaa aaaatatgtt gcagcacgcg cgatatctca
    15421 aatttcaaga tttttcacag gtatagaaat ccatccaggt gctaaaattg gaaagcgtct
    15481 atttatagat catggtatgg gcgttgtaat aggagaaaca tgtacaattg gtgataatgt
    15541 gacaatctat caaggcgtga cacttggtgg gacagggaaa gaaagaggga aaagacaccc
    15601 agatatagga gacaatgttt taatagcagc cggtgcgaaa gttttaggaa atattaaaat
    15661 aaattcaaat gtaaatattg gtgcaaattc agttgtttta caatcagttc caagttattc
    15721 aacggttgtt ggtataccag gacatattgt taagcaagat ggtgttcgag ttggaaaaac
    15781 atttgatcat cgccatctac ctgatccaat ttatgaacaa attaagcatt tagaacgaca
    15841 acttgaaaag actaggaatg gagagattca agatgattac attatataat acgcttacac
    15901 gtcaaaaaga agtgttcaag cctatagaac cagggaaagt aaaaatgtat gtatgtggtc
    15961 ctactgtata taactacatt catattggta acgcaagacc agcaattaat tatgacgtag
    16021 tgagacgtta ctttgaatac caaggatata atgtagaata tgtatcaaat tttacagacg
    16081 tagatgataa attaattaaa cgttctcaag aattaaatca gtctgttccc gaaattgcag
    16141 aaaaatatat cgctgctttt catgaagatg ttggtgcgtt aaatgttaga aaagcgactt
    16201 caaatccaag ggtaatggac catatggatg acattattca atttattaaa gatttggtgg
    16261 atcaaggtta tgcatatgaa agtggtggcg atgtttactt tagaacacgt aaatttgaag
    16321 gttatggtaa attaagtcat caatccatag atgacttaaa agtgggtgct cgtatagatg
    16381 caggagagca taaagaagat gcacttgatt ttacattgtg gaaaaaagcg aagcctggcg
    16441 agattagttg ggatagccca tttggtgaag gtagaccagg atggcatata gaatgttctg
    16501 taatggcatt tcatgagcta ggacctacaa ttgatataca tgcgggtggt tcagatttac
    16561 aatttccaca tcatgaaaat gaaatagcac aatcagaagc acataatcat gcgccatttg
    16621 ctaattattg gatgcataat ggtttcatta atattgataa tgaaaaaatg agtaaatcac
    16681 taggcaactt tattttagtt cacgatatta ttaaagaagt tgatccagat gtactaagat
    16741 tctttatgat tagcgtacat tatagaagcc caattaacta taatctagaa ttggtagaat
    16801 cagcacgtag tggactagag cgtattcgca atagttatca attaattgaa gagcgcgcac
    16861 aaattgctac taatattgaa aatcaacaga catatattga tcaaattgat gcgattttaa
    16921 atcgttttga aacagttatg aatgatgatt ttaatacagc taatgcaatt acagcttggt
    16981 atgatttagc aaaacttgcg aataaatatg tactagagaa tacaacatca acagaagtaa
    17041 ttgataaatt taaagcagtt tatcaaattt tcagcgatgt tttaggtgta ccgttaaaat
    17101 ctaaaaatgc agatgaatta ttggatgaag atgttgaaaa attaatcgaa gagcgtaatg
    17161 aagcaaggaa aaacaaagat tttgcacgag cagatgaaat tcgagacatg ctgaaatcac
    17221 aaaacattat attagaagac acacctcaag gggttagatt taaacgtgga taatcaacaa
    17281 gataatcaca ttaaattatt gaatccattg accttagcat atatgggaga cgcagtctta
    17341 gatcaatatg tacgtaccta tatcgtttta aagcttaaaa gtaagcctaa taaactacat
    17401 caaatgtcta aaaaatatgt atctgccaaa agtcaggcgc aaacgttaga atatttaatg
    17461 gagcaagaat ggtttacaga cgaagaaatg gatattttga agcgagggcg taacgcgaaa
    17521 agtcatacta aagctaaaaa cactgatgtt caaacatatc gtaaaagttc agcgatagaa
    17581 gcagtgatag gttttcttta tttagaaaaa agagaagaac gattagaggc attattaaat
    17641 aaaataataa caatagtaaa cgaaaggtag tgacgatgtg gaagatacgg ttattgttgg
    17701 taggcatgct gttagagaag cgattattac tgggcatccg ataaataaga tattgattca
    17761 agaaggtatt aaaaagcaac aaattaatga aattttaaaa aatgcaaaag atcaaaaaat
    17821 cattgttcaa actgtaccaa aatctaaatt agatttttta gcaaatgcac cacatcaggg
    17881 tgttgcagcg cttattgcac catatgaata tgctgacttc gatcaatttt taaaacagca
    17941 aaaagaaaaa gaaggtttat cgacagtact tatattagac ggcttagaag acccgcataa
    18001 cttgggatca attttaagaa cagccgatgc aacgggagtt gatggtgtta ttattcctaa
    18061 acgtcgttca gttacactaa cgcaaacagt tgcaaaagcc tcaacaggtg caattgaaca
    18121 tgtaccagtt attcgagtga caaatttagc taaaactatc gatgaactaa aagataatgg
    18181 cttttgggta gctggcactg aagctaataa tgcaacagat tatagaaatc tagaagcgga
    18241 catgtcattg gctattgtaa ttggtagcga aggacagggt atgagtcgcc tagtaagtga
    18301 taaatgcgat ttttatatta agattccaat ggttggacat gtaaacagtt tgaatgcttc
    18361 ggttgcagca agtttaatga tgtacgaagt atttcgaaaa agacatgatg ttggagaaat
    18421 ataatgaaag aacgttactt aatcattgat ggatacaata tgataggaca atcaccaacg
    18481 ctaagcgcca ttgcaaaaga gaatttagaa gaagctagaa tacaattaat agatgcaatt
    18541 gcaaattata atgcagttat ttcagatgaa attatttgtg ttttcgatgc ttatgaccaa
    18601 tcgggtgttg aaagagaata catgtatcat ggcgttaaaa cgatttttac caaggaaaaa
    18661 gaaacagctg atagtttcat agaacgttat gtttatgaac tttatgacaa gcatactaag
    18721 catattacag ttgtaacaag tgatatgagt gagcaacatg ctatctttgg atcaggtgca
    18781 tatagaatat catctcgcga aatgtggaga gatttaaaag aaaatgaaat tgatgtgagt
    18841 aaatcattag atgatataag tgaaaacaag ccaagaactc gaattccgtt atcttctgaa
    18901 atccttgcag aatttgaaaa aatacgaaga ggacatcata agaaatgaca tttccgtcat
    18961 cttgaaattt tgaatgtaac aatattaaac taaccttaaa ttttagatag aaggggttag
    19021 tttaatactt gaaatatgat ttgacaactc aagacagtac aatcaaacgt aacaatgcaa
    19081 taaatgataa agacttcgaa aagttagtaa tggatctaca accattaatt attcgacgca
    19141 tcaaaacatt tggatttaat cattatgatt tagaagactt atatcaagaa atacttatac
    19201 ggatgtatag gtcggtccaa acatttgatt ttagtggaga gcagcctttc acaaattatg
    19261 ttcaatgttt aattacgtct gtaaagtatg attatttgag aaaatattta gctacaaata
    19321 aaagaatgga taatttgatt aatgaatata gagttacgta tccatgtgca ataaagcgtt
    19381 ttgatgttga aaacaattat ttgaataaat tagcaattaa agagttgatt tgtcagttta
    19441 agtatttgag tgcatttgaa aaagatgtca tgtatttaat gtgtgaacaa tataagccga
    19501 gagaaattgc tcaattgatg catgtaaaag agaaagtgat ttataatgcc atacaacgat
    19561 gtaaaaataa aataaaacgt tatttcaaaa tgatttgaaa agcgccttag gacgtgaatt
    19621 gaattataac gtgttactta ctgatggttt gacatttgtt ataaatttta tgtatagtat
    19681 actggtatta taatgaataa aggtgaatta ttgtgagaaa aataccttta aattgtgaag
    19741 cttgtggcaa tagaaattat aatgttccta agcaagaagg ctcggcaaca agattaacct
    19801 taaagaaata ttgtccaaaa tgtaacgcgc acacaattca taaagaatcg aaataaatac
    19861 attcgaaata atactttgat aatatgttca aaggatttgg aggttgagca gatggctaaa
    19921 aaagaaagtt tctttaaagg cgttaagtct gaaatggaaa aaacaagttg gccgacgaaa
    19981 gaagagctat ttaaatatac tgtaattgta gtttctactg ttatattctt cttagtcttt
    20041 ttctatgcct tagatttagg aattacagca ttgaaaaatt tattatttgg ttagaggagt
    20101 gaagacatgt ctgaagaagt tggcgcaaag cgttggtatg cagtgcatac atattctgga
    20161 tatgaaaata aagttaaaaa gaatttagaa aaaagagtag aatctatgaa tatgactgaa
    20221 caaatcttta gagtagtcat accggaagaa gaagaaaatc aagtaaaaga tggcaaagct
    20281 aaaacgactg ttaaaaaaac attccctgga tatgtcttag tggaattaat catgacagat
    20341 gaatcatggt atgtggtaag aaatacacca ggtgttactg gttttgtagg ttctgcaggt
    20401 gcagggtcta agccaaatcc attgttacca gaagaagttc gcttcatctt aaaacaaatg
    20461 ggtcttaaag aaaagactat cgatgttgaa ctcgaagttg gcgagcaagt tcgtattaaa
    20521 tcaggtccat ttgcgaatca agttggtgaa gttcaagaaa ttgaaacaga taagtttaag
    20581 ctaacagtat tagtagatat gtttggccga gaaacaccag tagaagttga attcgatcaa
    20641 atagaaaagc tttaattaac aattaaagtt attaaactaa ccaaaagata aaaaagagta
    20701 ttgatttttt aattagaaaa gtgttaaaat tatgtggtcg cgcttttaga gcgcccattt
    20761 cgtcacgaaa tgttaagagt gggagggcaa aactgagccc tgtgaccaca tcacgatatc
    20821 aaggaggtgc acatcgtggc taaaaaagta gataaagttg ttaaattaca aattcctgca
    20881 ggtaaagcga atccagcacc accagttggt ccagcattag gtcaagcagg tgtgaacatc
    20941 atgggattct gtaaagagtt caatgcacgt actcaagatc aagcaggttt aattattccg
    21001 gtagaaatca gtgtttatga agatcgttca tttacattta ttacaaaaac tccaccggct
    21061 ccagtattac ttaaaaaagc agctggtatt gaaaaaggtt caggcgaacc aaacaaaact
    21121 aaagttggta cagtaactaa agatcaagta cgcgaaattg ctaacagcaa aatgcaagac
    21181 ttaaacgctg ctgacgaaga agcagctatg cgtattatcg aaggtactgc acgtagtatg
    21241 ggtatcgttg tagaataatt ttacgaatat taaatttgat tacatgattt aaacgatgaa
    21301 gcagataaca gagataataa tgatgaatta taaatataat ctgaatgact agattaatga
    21361 ttgatttatt cataagatta attcttctgt tgtctgctct taacttgcat atagcaagta
    21421 atgtgggagg aaattccgct aaaaccacta aaggaggaac tataaatggc taaaaaaggt
    21481 aaaaagtatc aagaagcagc tagtaaagtt gaccgtactc agcactacag tgttgaagaa
    21541 gcaattaaat tagctaaaga aacaagcatt gctaactttg acgcttctgt tgaagttgca
    21601 ttccgtttag gaattgatac acgtaaaaat gaccaacaaa tccgtggtgc agttgtatta
    21661 ccaaacggaa ctggtaaatc acaaagtgta ttagtattcg ctaaaggtga caaaattgct
    21721 gaagctgaag cagcaggtgc tgactatgta ggtgaagcag aatacgttca aaaaatccaa
    21781 caaggttggt tcgacttcga tgtagtagtt gctacaccag acatgatggg tgaagttggt
    21841 aaattaggtc gtgtattagg accaaaaggt ttaatgccaa accctaaaac tggaactgta
    21901 acaatggatg ttaaaaaagc tgttgaagaa atcaaagctg gtaaagtaga atatcgtgct
    21961 gaaaaagctg gtatcgtaca tgcatcaatt ggtaaagttt catttactga tgaacaatta
    22021 attgaaaact tcaatacttt acaagatgta ttagctaaag ctaaaccatc atctgctaaa
    22081 ggtacatact tcaaatctgt tgctgtaact acaacaatgg gtcctggagt taaaattgat
    22141 actgcaagtt tcaaataata aataatataa acaattacag gctgaaagaa atatctttca
    22201 gtctgtaaaa atatattgac aataagtaat ttccaagtta tattacttat tgtgattatt
    22261 ttacctaaga cagtaggagt tatttataac ttaaaattta tcctgccgag gctaaaattg
    22321 acttgaacgt gatgatctat gatctttcaa gcactttttg ccgtgggtag aaagtgcttt
    22381 ttttattaat tttaaaaaaa gcaccaaaaa tttaaatgga ggtgtctgaa tgtctgctat
    22441 cattgaagct aaaaaacaac tagttgatga aattgctgag gtactatcaa attcagtttc
    22501 aacagtaatc gttgactacc gtggattaac agtagctgaa gttactgact tacgttcaca
    22561 attacgtgaa gctggtgttg agtataaagt atacaaaaac actatggtac gtcgtgcagc
    22621 tgaaaaagct ggtatcgaag gcttagatga attcttaaca ggtcctactg ctattgcaac
    22681 ttcaagtgaa gatgctgtag ctgcagcgaa agtaatttct ggatttgcta aagatcatga
    22741 agcattagaa attaaatcag gcgttatgga aggcaatgtt attacagcag aagaagttaa
    22801 aactgttggt tcattacctt cacacgatgg tcttgtatct atgcttttat cagtattaca
    22861 agctcctgta cgcaacttcg cttatgcggt taaagctatt ggagaacaaa aagaagaaag
    22921 cgctgaataa tttttagcgt aaaaaaatta aaaataatgg aggaattata aaatggctaa
    22981 tcatgaacaa atcattgaag cgattaaaga aatgtcagta ttagaattaa acgacttagt
    23041 aaaagcaatt gaagaagaat ttggtgtaac tgcagctgct ccagtagcag tagcaggtgc
    23101 agctggtggc gctgacgctg cagcagaaaa aactgaattt gacgttgagt taacttcagc
    23161 tggttcatct aaaatcaaag ttgttaaagc tgttaaagaa gcaactggtt taggattaaa
    23221 agatgctaaa gaattagtag acggagctcc taaagtaatc aaagaagctt tacctaaaga
    23281 agaagctgaa aaacttaaag aacaattaga agaagttgga gctactgtag aattaaaata
    23341 attcaagtat cttaaactta ataatcaaag ttttatagca agtattgcta taatataatg
    23401 attctttgag aagttaaaac cccgttattt tgataacggg gttttattca tttaaagact
    23461 gagtgaaatg ttataattat aatgacgagt tacaaagtga agatgaggtg gaataatgag
    23521 tcattattac gatgaagatc caagtgtaat tagcaatgaa caacgtattc aatatcaatt
    23581 aaaccatcat aaaattgatt taataactga taatggagtg ttttcgaaag ataaagtaga
    23641 ttatggttca gatgttcttg ttcaaacttt tttaaaagcg catccacctg gtccaagtaa
    23701 gcgaattgcc gatgttggtt gtggttacgg accaattggt ttgatgattg ctaaagtatc
    23761 accacatcat tcaattacaa tgctagatgt taatcacaga gcgctagcct tagttgaaaa
    23821 aaacaaaaaa ataaatggta ttgataatgc gatcgtaaag gaaagtgatg ctttgtctgc
    23881 tgtggaagac aaaagttttg attttatttt aaccaatcca ccaataagag cagggaaaga
    23941 aaccgtgcat cgtatattcg agcaagcatt acatagatta gactcgaacg gtgaactatt
    24001 cgttgtaatt cagaagaagc aaggtatgcc atctgcaaag aaaagaatga atgaactttt
    24061 tggaaatgta gaagtggtaa ataaagataa aggatattac attctgagaa gtataaaagc
    24121 ttgaaatgaa atggatattc tgttatagtt atacaatgta aaaatttatg ttcaataagt
    24181 gtgtactttt acgttaaata gataagttaa ttaagaataa atatagaatc gaaaatggtg
    24241 tcatcattaa tgttgccgtt ttctttttgt ctttttatta atatgcttat ggtatttagc
    24301 taaaagcgga tcacataatt tttgaggggt gaatctgttt ggcaggtcaa gttgtccaat
    24361 atggaagaca tcgtaaacgt agaaactacg cgagaatttc agaagtatta gaattaccaa
    24421 acttaataga aattcaaact aaatcttacg agtggttcct aagagaaggt ttaatcgaaa
    24481 tgtttagaga catttctcca attgaagatt ttactggtaa tttgtcatta gagtttgtgg
    24541 attaccgttt aggagaacca aaatatgatt tagaagaatc taaaaaccgt gacgctactt
    24601 atgctgcacc tcttcgtgta aaagtgcgtc taatcattaa agaaacagga gaagttaaag
    24661 aacaagaagt ctttatgggt gatttcccat taatgactga tacaggtacg ttcgttatca
    24721 atggtgcaga acgtgtaatc gtatctcaat tagttcgttc accatccgtt tatttcaatg
    24781 aaaaaatcga caaaaatggt cgtgaaaact atgatgcaac aattattcca aaccgtggtg
    24841 catggttaga atatgaaaca gatgctaaag atgttgtata cgtgcgtatt gatagaacac
    24901 gtaaactacc attaacagta ttgttacgtg cattaggttt ctcaagcgac caagaaattg
    24961 ttgacctttt aggtgacaat gaatatttac gtaatacttt agagaaagac ggcactgaaa
    25021 acactgaaca agcgttatta gaaatctatg aacgtttacg tccaggtgaa ccaccaactg
    25081 ttgaaaatgc taaaagtcta ttgtattcac gtttctttga tccaaaacgc tatgacttag
    25141 caagcgtggg tcgttataaa acaaacaaaa aattacattt aaaacatcgt ttatttaatc
    25201 aaaaattagc tgagccaatt gtaaatactg aaactggtga aattgtagtt gaagaaggta
    25261 cagtgcttga tcgtcgtaaa atcgacgaaa tcatggatgt acttgaatca aatgcaaaca
    25321 gcgaagtgtt tgaattgcat ggtagcgtta tagacgagcc agtagaaatt caatcaatta
    25381 aagtatatgt tcctaacgat gatgaaggtc gtacgacaac tgtaattggt aatgctttcc
    25441 ctgactcaga agttaaatgc attacaccag cagatatcat tgcttcaatg agttacttct
    25501 ttaacttatt aagcggtatt ggatatacag atgatattga ccatttaggt aaccgtcgtt
    25561 tacgttctgt aggtgaatta ctacaaaacc aattccgtat cggtttatca agaatggaaa
    25621 gagttgtacg tgaaagaatg tcaattcaag atactgagtc tatcacacct caacaattaa
    25681 ttaatattcg acctgttatt gcatctatta aagaattctt tggtagctct caattatcac
    25741 aattcatgga ccaagcaaac ccattagctg agttaacgca taaacgtcgt ctatcagcat
    25801 taggacctgg tggtttaaca cgtgaacgtg ctcaaatgga agtacgtgac gttcactact
    25861 ctcactatgg ccgtatgtgt ccaattgaaa cacctgaggg accaaacatt ggattgatta
    25921 actcattatc aagttatgca cgtgtaaatg aattcggctt tattgaaaca ccatatcgta
    25981 aagttgattt agatacacac gctatcactg atcaaattga ctatttaaca gctgacgaag
    26041 aagatagcta tgttgtagca caagcaaact ctaaattaga tgaaaatggt cgtttcatgg
    26101 atgatgaagt tgtatgtcgt ttccgtggta acaacacagt tatggctaaa gaaaaaatgg
    26161 attatatgga tgtatcgccg aagcaagttg tttcagcagc gacagcatgt attccattct
    26221 tagaaaatga tgactcaaac cgtgcattga tgggtgcgaa catgcaacgt caagcagtgc
    26281 ctttgatgaa tccagaagca ccatttgttg gtacaggtat ggaacacgtt gcagcacgtg
    26341 attctggtgc ggctattaca gctaagcaca gaggtcgtgt tgaacatgtt gaatctaatg
    26401 aaattcttgt acgtcgtcta gttgaagaga acggcgttga gcatgaaggt gaattagatc
    26461 gctatccatt agctaaattt aaacgttcaa actcaggtac atgttataac caacgtccaa
    26521 tcgttgcagt tggagatgtt gttgagtata acgagatttt agcagacgga ccatctatgg
    26581 aattaggaga aatggcatta ggtagaaacg tagtagttgg tttcatgact tgggacggtt
    26641 acaactatga ggatgccgtt atcatgagtg aaagacttgt gaaagatgac gtgtatactt
    26701 ctattcatat tgaagagtat gaatcagaag cacgtgatac taagttagga cctgaagaaa
    26761 tcacaagaga tattcctaat gtttctgaaa gtgcacttaa gaacttagac gatcgtggta
    26821 tcgtttatat tggtgcagaa gtaaaagatg gagatatttt agttggtaaa gtaacgccta
    26881 aaggtgtaac tgagttaact gccgaagaaa gattgttaca tgcaatcttt ggtgaaaaag
    26941 cacgtgaagt tagagatact tcattacgtg tacctcacgg cgctggcggt atcgttcttg
    27001 atgtaaaagt attcaatcgt gaagaaggcg acgatacatt atcacctggt gtaaaccaat
    27061 tagtacgtgt atacatcgtt caaaaacgta aaattcatgt tggtgataag atgtgtggtc
    27121 gacatggtaa caaaggtgtc atttctaaga ttgttcctga agaagatatg ccttacttac
    27181 cagacggacg tccgatcgat atcatgttaa accctcttgg tgtaccatct cgtatgaaca
    27241 tcggacaagt attagagcta cacttaggta tggctgctaa aaatcttggt attcacgttg
    27301 catcacctgt atttgacggt gcaaacgatg acgatgtatg gtcaacaatt gaagaagctg
    27361 gtatggctcg tgatggtaaa actgtacttt atgatggacg tacaggtgaa ccattcgata
    27421 accgtatttc agtaggtgta atgtacatgt tgaaacttgc gcacatggtt gatgataaat
    27481 tacatgcgcg ttcaacagga ccatattcac ttgttacaca acaaccactt ggcggtaaag
    27541 cgcaattcgg tggacaacgt ttcggtgaga tggaggtatg ggcacttgaa gcatatggtg
    27601 ctgcatacac attacaagaa atcttaactt acaaatccga tgatacagta ggacgtgtga
    27661 aaacatacga ggctattgtt aaaggtgaaa acatctctag accaagtgtt ccagaatcat
    27721 tccgagtatt gatgaaagaa ttacaaagtt taggtttaga tgtaaaagtt atggatgagc
    27781 aagataatga aatcgaaatg acagacgttg atgacgatga tgttgtagaa cgcaaagtag
    27841 atttacaaca aaatgatgct cctgaaacac aaaaagaagt tactgattaa tacgcaattt
    27901 acaaaacagg caaaaagata ctaagctgaa ttttattgat gattcagttt agtactttaa
    27961 gccattttaa ataaatgcaa atcaatcaaa tagcacagct aatctaaatt gaaggaggta
    28021 ggctccttga ttgatgtaaa taatttccat tatatgaaaa taggattggc ttcacctgaa
    28081 aaaatccgtt cttggtcttt tggtgaagtt aaaaaacctg aaacaatcaa ctaccgtaca
    28141 ttaaaacctg aaaaagatgg tctattctgt gaaagaattt tcggacctac aaaagactgg
    28201 gaatgtagtt gtggtaaata caaacgtgtt cgctacaaag gcatggtctg tgacagatgt
    28261 ggagttgaag taactaaatc taaagtacgt cgtgaaagaa tgggtcacat tgaacttgct
    28321 gctccagttt ctcacatttg gtatttcaaa ggtataccaa gccgtatggg attattactt
    28381 gacatgtcac caagagcatt agaagaagtt atttactttg cttcttatgt tgttgtagat
    28441 ccaggtccaa ctggtttaga aaagaaaact ttattatctg aagctgaatt cagagattat
    28501 tatgataaat acccaggtca attcgttgca aaaatgggtg cagaaggtat taaagattta
    28561 cttgaagaga ttgatcttga cgaagaactt aaattgttac gcgatgagtt ggaatcagct
    28621 actggtcaaa gacttactcg tgcaattaaa cgtttagaag ttgttgaatc attccgtaat
    28681 tcaggtaaca aaccttcatg gatgatttta gatgtacttc caatcatccc accagaaatt
    28741 cgtccaatgg ttcaattaga tggtggacga tttgcaacaa gtgacttaaa cgacttatac
    28801 cgtcgtgtaa ttaatcgaaa taatcgtttg aaacgtttat tagatttagg tgcacctggt
    28861 atcatcgttc aaaacgaaaa acgtatgtta caagaagccg ttgacgcttt aattgataat
    28921 ggtcgtcgtg gtcgtccagt tactggccca ggtaaccgtc cattaaaatc tttatctcat
    28981 atgttaaaag gtaaacaagg tcgtttccgt caaaacttac ttggtaaacg tgttgactat
    29041 tcaggacgtt cagttattgc agtaggtcca agcttgaaaa tgtaccaatg tggtttacca
    29101 aaagaaatgg cacttgaact atttaaacca ttcgtaatga aagaattagt tcaacgtgaa
    29161 attgcaacta acattaaaaa tgcgaagagt aaaatcgaac gtatggatga tgaagtttgg
    29221 gacgtattgg aagaagtaat tagagaacat cctgtattac ttaaccgtgc accaacactt
    29281 catagacttg gtattcaagc atttgaacca actttagttg aaggtcgtgc gattcgtcta
    29341 catccacttg taacaacagc ttataacgct gactttgacg gtgaccaaat ggcggttcac
    29401 gttcctttat caaaagaggc acaagctgaa gcaagaatgt tgatgttagc agcacaaaac
    29461 atcttgaacc ctaaagatgg taaacctgta gttacaccat cacaagatat ggtacttggt
    29521 aactattacc ttactttaga aagaaaagat gcagtaaata caggcgcaat ctttaataat
    29581 acaaatgaag tattaaaagc atatgcaaat ggctttgtac atttacacac tagaattggt
    29641 gtacatgcaa gttcattcaa taatccaaca tttactgaag aacaaaacaa aaagattctt
    29701 gctacgtcag taggtaaaat tatattcaat gaaatcattc cagattcatt tgcttatatt
    29761 aatgaaccta cgcaagaaaa cttagaaaga aagacaccaa acagatattt catcgatcct
    29821 acaactttag gtgaaggtgg attaaaagaa tactttgaaa atgaagaatt aattgaacct
    29881 ttcaacaaaa aattcttagg taatattatt gcagaagtat tcaacagatt tagcatcact
    29941 gatacatcaa tgatgttaga ccgtatgaaa gacttaggat tcaaattctc atctaaagct
    30001 ggtattacag taggtgttgc tgatatcgta gtattacctg ataagcaaca aatacttgat
    30061 gagcatgaaa aattagtcga cagaattaca aaacaattca accgtggttt aatcactgaa
    30121 gaagaaagat ataatgcagt tgttgaaatt tggacagatg caaaagatca aattcaaggt
    30181 gaattgatgc aatcacttga taaaactaac ccaatcttca tgatgagtga ttcaggtgcc
    30241 cgtggtaacg catctaactt tacacagtta gcaggtatgc gtggattgat ggccgcacca
    30301 tctggtaaga ttatcgaatt accaatcaca tcttcattcc gtgaaggttt aacagtactt
    30361 gaatacttca tctcaactca cggtgcacgt aaaggtcttg ccgatacagc acttaaaaca
    30421 gctgactcag gatatcttac tcgtcgtctt gttgacgtgg cacaagatgt tattgttcgt
    30481 gaagaagact gtggtactga tagaggttta ttagtttctg atattaaaga aggtacagaa
    30541 atgattgaac catttatcga acgtattgaa ggtcgttatt ctaaagaaac aattcgtcat
    30601 cctgaaactg atgaaataat cattcgtcct gatgaattaa ttacacctga aattgctaag
    30661 aaaattacag atgctggtat tgaacaaatg tatattcgct cagcatttac ttgtaacgca
    30721 cgacatggtg tttgtgaaaa atgttacggt aaaaaccttg ctactggtga aaaagttgaa
    30781 gttggtgaag cagttggtac aattgcagcc caatctatcg gtgaaccagg tacacagctt
    30841 acaatgcgta cattccatac aggtggggta gcaggtagcg atatcacaca aggtcttcct
    30901 cgtattcaag agattttcga agcacgtaac cctaaaggtc aagcggtaat tacggaaatc
    30961 gaaggtgtcg tagaagatat taaattagca aaagatagac aacaagaaat tgttgttaaa
    31021 ggtgctaatg aaacaagatc ataccttgct tcaggtactt caagaattat tgtagaaatc
    31081 ggtcaaccag ttcaacgtgg tgaagtatta actgaaggtt ctattgaacc taagaattac
    31141 ttatctgttg ctggattaaa cgcgactgaa agctacttat taaaagaagt acaaaaagtt
    31201 taccgtatgc aaggtgtaga aatcgacgat aaacacgttg aggttatggt tcgacaaatg
    31261 ttacgtaaag ttagaattat cgaagcaggt gatacgaagt tattaccagg ttcattagtt
    31321 gatattcata actttacaga tgcaaataga gaagcattta aacaccgtaa gcgtcctgca
    31381 acagctaaac cagtattact tggtattact aaagcatcac ttgaaacaga aagtttctta
    31441 tctgcagcat cattccaaga aacaacaaga gttcttacag atgcagcaat taaaggtaag
    31501 cgtgatgact tattaggtct taaagaaaac gtaattattg gtaagttaat tccagctggt
    31561 actggtatga gacgttatag cgacgtaaaa tacgaaaaaa cagctaaacc agttgcagaa
    31621 gttgaatctc aaactgaagt aacggaataa caagtatata acagaggcta atgctttagc
    31681 ctcttgttat ttttatgtaa attatttgat ttaatgttga cgaattctct tgttcaatgt
    31741 taatatatta aaggttgatg caagcagaac tttggaggat aaattattgt ctaaggaaaa
    31801 agttgcacgc tttaacaaac aacattttgt agttggtctt aaagaaacgc ttaaagcgtt
    31861 aaagaaagat caagttacat ctttgattat tgctgaagac gttgaagtat atttaatgac
    31921 tcgcgtgtta agccaaatca atcagaaaaa tatacctgta tcttttttca aaagcaaaca
    31981 tgctttgggt aaacatgtag gtattaacgt caatgcgaca atagtagcat tgattaaatg
    32041 agaattagta agtgttttac ttactaaatt ttatttaacc taaaaatgaa ccacctggat
    32101 gtgtgggatt aaaaagtgaa gagaggagga catatcacat gccaactatt aaccaattag
    32161 tacgtaaacc aagacaaagc aaaatcaaaa aatcagattc tccagcttta aataaaggtt
    32221 tcaacagtaa aaagaaaaaa tttactgact taaactcacc acaaaaacgt ggtgtatgta
    32281 ctcgtgtagg tacaatgaca cctaaaaaac ctaattcagc gttacgtaaa tatgcacgtg
    32341 tgcgtttatc aaacaacatc gaaattaacg catacatccc tggtatcggc cataacttac
    32401 aagaacacag tgttgtactt gtacgtggtg gacgtgtaaa agacttacca ggtgtgcgtt
    32461 accatattgt acgtggagca cttgatactt caggtgttga cggacgtaga caaggtcgtt
    32521 cattatacgg aactaagaaa cctaaaaact aagaatttag tttttaatta aatcttaaac
    32581 ttaaaatatt taatataagg aagggaggat ttacattatg cctcgtaaag gatcagtacc
    32641 taaaagagac gtattaccag atccaattca taactctaag ttagtaacta aattaattaa
    32701 caaaattatg ttagatggta aacgtggaac agcacaaaga attctttatt cagcattcga
    32761 cctagttgaa caacgcagtg gtcgtgatgc attagaagta ttcgaagaag caatcaacaa
    32821 cattatgcca gtattagaag ttaaagctcg tcgtgtaggt ggttctaact atcaagtacc
    32881 agtagaagtt cgtccagagc gtcgtactac tttaggttta cgttggttag ttaactatgc
    32941 acgtcttcgt ggtgaaaaaa cgatggaaga tcgtttagct aacgaaattt tagatgcagc
    33001 aaataataca ggtggtgccg ttaagaaacg tgaggacact cacaaaatgg ctgaagcaaa
    33061 caaagcattt gctcactacc gttggtaaga taaaagcttt taccctgagt gtgttctata
    33121 ttaatgaatt ttcattaagc gttcatgctt agggcatcgc catatctatc gtatttattc
    33181 agtaatataa actggaagga gaaaaaatac atggctagag aattttcatt agaaaaaact
    33241 cgtaatatcg gtatcatggc tcacattgat gctggtaaaa cgactacgac tgaacgtatt
    33301 ctttattaca ctggccgtat ccacaaaatt ggtgaaacac acgaaggtgc ttcacaaatg
    33361 gactggatgg agcaagaaca agaccgtggt attactatca catctgctgc aacaacagca
    33421 gcttgggaag gtcaccgtgt aaacattatc gatacacctg gacacgtaga cttcactgta
    33481 gaagttgaac gttcattacg tgtacttgac ggagcagtta cagtacttga tgcacaatca
    33541 ggtgttgaac ctcaaactga aacagtttgg cgtcaggcta caacttatgg tgttccacgt
    33601 atcgtatttg taaacaaaat ggacaaatta ggtgctaact tcgaatactc tgtaagtaca
    33661 ttacatgatc gtttacaagc taacgctgct ccaatccaat taccaattgg tgcggaagac
    33721 gaattcgaag caatcattga cttagttgaa atgaaatgtt tcaaatatac aaatgattta
    33781 ggtactgaaa ttgaagaaat tgaaattcct gaagaccact tagatagagc tgaagaagct
    33841 cgtgctagct taatcgaagc agttgcagaa actagcgacg aattaatgga aaaatatctt
    33901 ggtgacgaag aaatttcagt ttctgaatta aaagaagcta tccgccaagc tactactaac
    33961 gtagaattct acccagtact ttgtggtaca gctttcaaaa acaaaggtgt tcaattaatg
    34021 cttgacgctg taattgatta cttaccttca ccactagacg ttaaaccaat tattggtcac
    34081 cgtgctagca accctgaaga agaagtaatc gcgaaagcag acgattcagc tgaattcgct
    34141 gcattagcgt tcaaagttat gactgaccct tatgttggta aattgacatt cttccgtgtg
    34201 tattcaggta caatgacatc tggttcatac gttaagaact ctactaaagg taaacgtgaa
    34261 cgtgtaggtc gtttattaca aatgcacgct aactcacgtc aagaaatcga tactgtatac
    34321 tctggagata tcgctgctgc ggtaggtctt aaagatacag gtactggtga tactttatgt
    34381 ggtgagaaaa atgacattat cttggaatca atggaattcc cagagccagt tattcactta
    34441 tcagtagagc caaaatctaa agctgaccaa gataaaatga ctcaagcttt agttaaatta
    34501 caagaagaag acccaacatt ccatgcacac actgacgaag aaactggaca agttatcatc
    34561 ggtggtatgg gtgagcttca cttagacatc aaagtagacc gtatgaagaa agaattcaac
    34621 gttgaatgta acgtaggtgc tccaatggtt tcatatcgtg aaacattcaa atcatctgca
    34681 caagttcaag gtaaattctc tcgtcaatct ggtggtcgtg gtcaatacag tgatgttcac
    34741 attgaattca caccaaacga aacaggcgca ggtttcgaat tcgaaaacgc tatcgttggt
    34801 ggtgtagttc ctcgtgaata cattccatca gtagaagctg gtcttaaaga tgctatggaa
    34861 aatggtgtct tagcaggtta tcctttaatt gatgttaaag ctaaattata tgatggttca
    34921 taccatgatg tcgattcatc tgaaatggcc ttcaaaattg ctgcatcatt agcacttaaa
    34981 gaagctgcta aaaaatgtga tcctgtaatc ttagaaccaa tgatgaaagt aactattgaa
    35041 atgcctgaag agtacatggg tgatatcatg ggtgacgtaa catctcgtcg tggacgtgtt
    35101 gatggtatgg aacctcgtgg taatgcacaa gttgttaatg cttatgtacc actttcagaa
    35161 atgttcggtt atgcaacatc attacgttca aacactcaag gtcgcggtac ttacactatg
    35221 tacttcgatc actatgctga agttccaaaa tcaatcgctg aagatattat caagaaaaat
    35281 aaaggtgaat aatataactt gttttgacta gctagcctag gttaaaatac aaggtgagct
    35341 taaatgtaag ctatcatctt tatagtttga ttttttgggg tgaatgcatt ataaaagaat
    35401 tgtaaaattc tttttgcatc gctataaata atttctcatg atggtgagaa actatcatga
    35461 gagataaatt taaatattat ttttaattag aataggagag attttataat ggcaaaagaa
    35521 aaattcgatc gttctaaaga acatgccaat atcggtacta tcggtcacgt tgaccatggt
    35581 aaaacaacat taacagcagc aatcgctact gtattagcaa aaaatggtga ctcagttgca
    35641 caatcatatg acatgattga caacgctcca gaagaaaaag aacgtggtat cacaatcaat
    35701 acttctcaca ttgagtacca aactgacaaa cgtcactacg ctcacgttga ctgcccagga
    35761 cacgctgact acgttaaaaa catgatcact ggtgctgctc aaatggacgg cggtatctta
    35821 gtagtatctg ctgctgacgg tccaatgcca caaactcgtg aacacattct tttatcacgt
    35881 aacgttggtg taccagcatt agtagtattc ttaaacaaag ttgacatggt tgacgatgaa
    35941 gaattattag aattagtaga aatggaagtt cgtgacttat taagcgaata tgacttccca
    36001 ggtgacgatg tacctgtaat cgctggttca gcattaaaag ctttagaagg cgatgctcaa
    36061 tacgaagaaa aaatcttaga attaatggaa gctgtagata cttacattcc aactccagaa
    36121 cgtgattctg acaaaccatt catgatgcca gttgaggacg tattctcaat cactggtcgt
    36181 ggtactgttg ctacaggccg tgttgaacgt ggtcaaatca aagttggtga agaagttgaa
    36241 atcatcggtt tacatgacac atctaaaaca actgttacag gtgttgaaat gttccgtaaa
    36301 ttattagact acgctgaagc tggtgacaac attggtgcat tattacgtgg tgttgctcgt
    36361 gaagacgtac aacgtggtca agtattagct gctcctggtt caattacacc acatactgaa
    36421 ttcaaagcag aagtatacgt attatcaaaa gacgaaggtg gacgtcacac tccattcttc
    36481 tcaaactatc gtccacaatt ctatttccgt actactgacg taactggtgt tgttcactta
    36541 ccagaaggta ctgaaatggt aatgcctggt gataacgttg aaatgacagt agaattaatc
    36601 gctccaatcg cgattgaaga cggtactcgt ttctcaatcc gtgaaggtgg acgtactgta
    36661 ggatcaggcg ttgttactga aatcattaaa taatttctaa tttcttagat tttatataaa
    36721 aagaagatcc ctcaatcgag gggtcttttt ttaatgtgta aattttgtaa tggctattcg
    36781 atttagaaga acaataattg atgaaagact gactaataaa acttataact gataatactg
    36841 tttaaataaa attgttgagt cttggacatt gtaaaatgct cccttcaaag ttttcatttt
    36901 ttcaatgtct actttgaagg gagcatttca ttagtttatg tctcagattc atatctttca
    36961 attaatttaa atgcttaatt tgttttaaat acttgctcta attcaatgat ttttaaaaat
    37021 acagctacag cgtattttaa tgatttttca tcaatatcaa atttgggatt atggtgtggc
    37081 gctgtaatac ctttactttc attaccacaa ccagtcagaa agaatgcacc tggtcgtact
    37141 ttcaaataat gtgaaaaatc ttctccaatc atcattaaat ctgattcatt aaagcgtaca
    37201 tgtaagtcat ttgttgcttc tttaataact tgatatgctt tctcgttatt atggacaggc
    37261 aaataccctt taatataatt caaatcatag ttaatatcat ttgctattgc taaaccttgt
    37321 aaaagcttat ccattttgtc cattacatga ttctgtatat ctgaatcgaa agttctaact
    37381 gtacctttac aaaatgcttg atcaggaata acgctatctg tggtgcctgc ttgaatcatt
    37441 ccaaatgaaa gtacagcttg tttaactgga tcgatcgtac gtgaaattat tttttgtgca
    37501 cttaaaatga actctgccat gattactatt gggtcaatgg tttcatgagg tttggcacca
    37561 tgaccgccac gacctttaat tgtgacacta aattcatctg gagaggccat gattgccccc
    37621 gcacgtgaat gaatagttcc agtaggataa ccactccata aatgtgtacc gtaaattcta
    37681 tctacatttt ccagacatcc agcatctatc atttcttgag aaccacctgg catgatttct
    37741 tcaccgtact ggaatattaa tacaacatta ccttctaata aatgtttatg ttcatctaaa
    37801 atctctgcta cagtaagtaa aattgctgta tgaccatcat gcccacacgc atgcatacat
    37861 cctggatttt tagacttata aggcacatcg tttaattcct cgacaggtaa cgcatcaaag
    37921 tcagctctta atgcaatggt aggtcctgtg cccaagcctt taaatgtggc tttgatacca
    37981 ttgcggccga taggagtttc aatatcacaa gataactggc ttaattggtt aacaatataa
    38041 tcatgtgttt gaaattcttc aaaagataac tcaggatatt ggtgtaaata acgtctgagt
    38101 tgaattgttt tattttcttt attatttgct agttggaacc aatctaacac ccttatcact
    38161 actttctaaa ataatgttta tagtataaca ttttatgaaa ttatcgtact aaatgattgc
    38221 tttgagatat tttatctatg aatgataagg ctttcaagtt atgtagaatt actgtatgat
    38281 aaaggtatta ccaaacaata cttaaggggg attatatact gtggttcaat cattacatga
    38341 gtttttagag gaaaatataa attatctaaa agaaaatggt ttgtataatg aaatagatac
    38401 aattgaaggt gcaaacggac cagaaatcaa aatcaatggg aaatcataca ttaacttatc
    38461 ttcaaataat tatttaggac tagcaacaaa tgaagatttg aaatcagctg caaaagcagc
    38521 tattgataca catggtgtag gtgcaggcgc tgttcgtaca atcaatggta cattagattt
    38581 acacgacgaa ttagaagaaa cactagcaaa atttaaagga acagaagctg caatagctta
    38641 tcaatcagga tttaattgta atatggctgc tatttcggct gtgatgaata aaaatgatgc
    38701 tattttatca gatgagctta atcatgcatc aattattgat ggatgtcgct tatctaaagc
    38761 taaaattatt cgagttaacc attcagacat ggatgattta cgtgcgaaag caaaagaagc
    38821 agttgaatca ggtcaataca ataaagtgat gtatatcact gatggcgttt ttagtatgga
    38881 tggtgatgtg gctaaattac ctgaaattgt agaaattgca gaagaatttg gtttattaac
    38941 ttatgttgac gacgctcatg gttcaggtgt tatgggtaaa ggcgctggta cggttaaaca
    39001 ttttggttta caagataaaa tcgatttcca aataggtacg ctttctaaag caattggtgt
    39061 cgttggcggt tatgtagcag gtacaaaaga gttaatagat tggttaaaag cacaatcacg
    39121 accattctta ttctctacat cattagcacc tggggatacc aaagcaataa ctgaagcagt
    39181 taaaaagtta atggattcaa ctgaattaca tgataaatta tgggacaatg cacaatattt
    39241 aaaaaatgga ttgtcaaaat taggatatga tacaggtgag tcagaaactc caattacacc
    39301 agtaattatt ggtgatgaaa aaacaactca agaatttagt aagcgtttaa aagacgaagg
    39361 tgtctatgtg aaatctatcg ttttcccaac agtaccaaga ggtacaggac gtgtaagaaa
    39421 tatgcctaca gctgcacata caaaagacat gttagatgaa gcaattgcgg cttatgaaaa
    39481 agtaggaaaa gaaatgaagt tgatttaata tttatttatt cccacggcaa atattgtcgt
    39541 gggctttttt taatgtttag tttattaaca gtaagttctt ataacaatgt ttagtgctcc
    39601 ccaaaaatta aagtttgaat tttaaaagca tcttgtagaa tttagttgta ttttttacaa
    39661 agaaattcat tttgattatt tttgataatg agcattttaa tagtaataca tgtttatagt
    39721 gtgtagtata tgtctatact agtagtaact atatagagaa agtaggaata aactatgtca
    39781 caagatgtaa atgaattaag taagcaacca acgccagata aagcagaaga taacgcattt
    39841 ttcccatcac catattccct tagtcaatat acagcaacta aaacagattt tgatggtgtt
    39901 gaacacaaag gtgcctataa agatggtaaa tggaaagtat tgatgattgc tgctgaagag
    39961 agatatgtat tattggaaaa tggaaaaatg ttctctacgg gtaatcatcc tgttgaaatg
    40021 ttattacctt tacatcattt aatggaagca ggttttgacg ttgatgttgc gacattatct
    40081 ggttatccag ttaaattaga attatgggct atgccaactg aagacgaggc agttattagt
    40141 acttataata aattgaaaga aaaattaaaa cagccaaaaa aattagcaga tgtgattaaa
    40201 aatgaattag gacctgattc agactattta tctgtcttta tcccaggcgg acatgctgca
    40261 gttgttggta tttctgaaag tgaggacgtt caacaaacat tagattgggc attagacaat
    40321 gaccgcttta tagttacatt atgtcatgga ccagcagcac tactttcagc agggctcaac
    40381 agagaaaaat ctccattaga aggatattct gtttgtgtct tccctgactc attagatgaa
    40441 ggtgcaaata ttgaaatagg ttatttacct ggacgcttga aatggttagt tgctgattta
    40501 ctaactaaac aaggattaaa agtagttaac gacgatatga caggcagaac gttaaaagat
    40561 cgtaaattat taacaggtga cagtccttta gcttcaaatg agttaggaaa attagcagtt
    40621 aatgaaatgt taaatgcaat acaaaataaa taattaaata ttaattagag gagcctcata
    40681 tgtaaatgta tgagggctct ttttttggca aaatttaagt gatacttgta aaatagaacc
    40741 tattatgagt atgatttaag aaaacgcttg caaaactaat aaccgcaact agcgatatgg
    40801 aggaaacatg atgtcttata gcattggaat tgattatgga acagcttcag gccgtgtgtt
    40861 tttaattaat acaactaacg gtcaagtagt atcaaaattt gtgaaaccat atacacatgg
    40921 tgtcattgag agtgaattaa atggtttgaa aataccatat acatatgcac ttcaaaatag
    40981 taatgattat ttagaaatta tggaagaagg aatatcatat atagtacgtg aatcaaaaat
    41041 agatccagtc aatatagtag gtattggtat agactttact tcatctacta ttatttttac
    41101 tgacgaaaac cttaacccgg tacataattt aaaacaattt aaaaacaatc cacatgcgta
    41161 tgtgaaactt tggaaacatc atggtgcata taaagaggca gagaaattat atcaaactgc
    41221 tattgaaaat aataataagt ggttaggcca ttatggatat aatgttagta gtgaatggat
    41281 gattcccaaa ataatggagg tcatgaatcg agcaccagaa attatggaaa aaacggctta
    41341 tattatggaa gcgggcgatt ggattgtaaa taaattaact aataaaaatg tacgctcgaa
    41401 ttgtggatta ggtttcaaag cattttggga agaagaaaca gggtttcatt atgatttatt
    41461 tgataaaata gaccccaaat tatcaaaagt aattcaagat aaagtatctg caccggttgt
    41521 taatattggt gaagtagtag ggaagctgga cgataaaatg gcacagaaat taggattatc
    41581 aaaagagact atggtaagtc cttttattat tgatgcccat gctagtttat taggtattgg
    41641 gtctgaaaaa gataaagaaa tgactatggt gatgggaaca agcacatgcc atcttatgtt
    41701 aaatgaaaag caacatcaag tgccaggtat atcaggttct gtaaaaggag caattattcc
    41761 agaattattt gcttatgaag cgggacaatc agcagtaggt gatttgtttg agtatgtcgc
    41821 taagcaagca ccaaagtcat atgtagatga agcagcaaat agaaatatga ctgtatttga
    41881 attaatgaat gaaaagataa aacatcaaat gccaggtgaa agcgggctca ttgctcttga
    41941 ttggcataat ggaaatcgaa gtgtattaag tgatagcaat ttaacaggtt gtatctttgg
    42001 attaacttta caaactaagc atgaggatat ttatagagca tatttagaag ctacagcatt
    42061 tggtactaag atgattatgc aacagtatca agattggcat atggaagtag aaaaggtatt
    42121 tgcatgtggc ggtataccta aaaagaatgc tgttatgatg gatatctatg cgaatgtact
    42181 gaataaaaaa ttaattgtta tggatagtga gtatgcacca gcaataggcg cagcaatatt
    42241 aggtgcagtc agtggtggcg cacataattc aattaatgat gcagttgatg ctatgaaaga
    42301 gccaatttta tacgaaatta atccagaagc ggaaaaagta caaaggtatg aaacattatt
    42361 taaagcttat aaggctttac atgatatcca tggttataaa aaagctaata taatgaaaga
    42421 tatccagagt ttaagagttg agggataaaa aatttaattt gacagtaatt agcaataata
    42481 aacgctataa attactaaaa tcaattaata caactagaat ttccatttac agaaatatca
    42541 gcaacatgta catgtcatat atacaagaaa gcgcttttat attataatta ttatgaaaat
    42601 gaatattatg tccgcttgtg atggactata gctatataga agagacaaag gagatatttc
    42661 tatgaaaaaa attatgatta ctggtgcatt aggacaaatt ggtacagaat tagttgttaa
    42721 gtgcagagaa atttatggga cagataatgt tcttgctaca gatattaggg aacctgaagc
    42781 agactcacct gtacaaaatg gaccatttga aatcttagac gtaacagatc gtgaccgtat
    42841 gtttgagtta gttagggact ttgaagcgga tagtctaatg catatggcag cattattatc
    42901 agcaactgct gagaaaaatc caattctagc ttgggattta aatatgggtg gattaatgaa
    42961 tgcattagaa gctgcaagaa cttataattt gcactttttc acaccaagtt caattggtgc
    43021 atttggagac tcaactccta aagttaatac gccacaagta acgattcagc aacctacgac
    43081 aatgtatggt gtaaataaag tagctggaga attattgtgt caatactatt tcaaacgttt
    43141 tggtgtagat acaagaagtg ttagattccc aggtttaatc tcgcatgtta aagagccagg
    43201 tggcggtact acagactatg ctgttgaaat atacttcaaa gcagtaagag agggtcatta
    43261 tacaagcttc atagataaag gcacgtatat ggatatgatg tatatggatg atgcaattga
    43321 agcaattatt aaacttatgg aagcagacga cgctaaatta gaaactagaa acggttataa
    43381 tttgagcgca atgagttttg atccagagat ggtaaaagaa gcaattcaag aatactatcc
    43441 aaattttaca ttagattacg atgttgatcc tattagacaa ggtatcgcta atagttggcc
    43501 ggattctatt gatacaagct gttcacgtgg cgaatgggga tttgatccta aatatgattt
    43561 agcgagcatg actaaattaa tgttagaagc tattgaacaa aaagatactg ttaaaaataa
    43621 taactaatca tttccattca ctttaataca cggaatgata ttttaaatta ctctttattt
    43681 taataaacta gtgcatgaat tctaatatta ttcattatac ttattgaatt cgcgagctta
    43741 gttcatttta aagtaaagag ttttttgtat gtaaagtata ttagtaaaac acagattact
    43801 tgtctctgtg aaattaatac gtttatacta aaagatatag tctttctaga aatctgttaa
    43861 ttaattttga atttttagaa aatttgttga acagcaaaat atggattgtt ataatttaag
    43921 ttaaacaaat tcttatacaa tattattagg aggcaatcac catgtcacaa gcagttaaag
    43981 ttgaacgacg agaaacatta aaacaaaaac caaatacatc tcaactaggt tttggtaaat
    44041 attttactga ttatatgttg agttatgatt atgatgcaga aaaaggatgg catgatttga
    44101 agatagtacc ttatggtcct attgaaattt cacctgctgc acaaggtgtt cattatggtc
    44161 aatcggtatt cgaaggatta aaagcatata aaaaagatgg ggaagttgca cttttccgtc
    44221 ctgaagaaaa ttttaagcgt cttaataact cgttagcacg attagaaatg cctcaagtag
    44281 acgaagcaga attgttagag gggctaaaac aattagttga tatagaaaga gattggattc
    44341 ctgaagggga aggtcaatca ttatatattc gtccatttgt ttttgcaaca gaaggggcac
    44401 ttggcgttgg tgcatcacat cagtataaat tattaattat tttatctcct tcaggtgcat
    44461 attatggtgg tgagacttta aaaccaacta aaatctatgt agaagatgaa tatgtacgtg
    44521 ctgttcgtgg cggtgtaggc tttgcaaaag ttgcaggtaa ctatgcggca agtttattag
    44581 cacaaactaa tgcaaataaa ttaggttatg accaagtatt atggcttgat ggtgttgaac
    44641 agaaatatat cgaagaagtt ggtagcatga acattttctt cgttgaaaat ggcaaagtaa
    44701 ttacaccaga gttgaatggc agtattttac ctggtattac acgtaaatct attatcgaat
    44761 tagctaaaaa cttaggatat gaagtcgaag agcgccgcgt ttcaatcgat gaattattcg
    44821 aatcatatga taaaggtgag ttaacagaag tatttggtag tggtactgca gcagttattt
    44881 cacctgtggg tacattgaga tacgaagatc gtgaaatcgt tattaataat aatgagactg
    44941 gtgaaattac tcaaaaatta tacgacgtct atactggtat tcaaaatggt actttagaag
    45001 ataaaaatgg ttggagagtc gttgtaccaa aatattaata aaaattgaat ataatcatga
    45061 aaacaatatg taaaagttaa tcatgactaa aatccctttc aatgaagcga agcatggtaa
    45121 taaattaagt ttacaatgtt tattgttaag tattgaaggg gatttcactt attattatat
    45181 ttaattcaat atttaaatag aacaatacta cgagttcatt ttcaggggat aacgaatatc
    45241 atagaatcag cataatacga aataaataaa taggagtatt gatatcaatg gaatggatat
    45301 tatttgataa agatggtacg ttaattgaat ttgatagaag ttgggaaaaa ataggggtac
    45361 gatttgtaca atcattgctt gagactttcc cagtacataa taaagaagct gctttaagac
    45421 aactcggtgt cattaaagaa tctattgatc caaaatcagt gatgggttca ggatctttac
    45481 aacaaattat ccaggcattt aatgatgtga cgggacaaga tacaaccgac tggtccaagt
    45541 caacaagtca aaagctggta gatgaacgta ttcctgaaat taattgggta gaaggtgtta
    45601 aagaagcact tatcgatttg aaagcaaaag gctatcaact tggtattgtt acgagtgata
    45661 ctaaaaaagg tgtagaacaa tttttagcac ataccaatgc tatctcgttg ttcgatttga
    45721 tcatttctac cgaagcggat gcctatgaga agccaaatcc taaagtatta tcgcctttat
    45781 ttgagcaata taatgtagat cctcagaaag tagctatagt aggagacact gctaatgata
    45841 tgaagacagc aagtaatgca aatttaggta tggcaatagg tgtattaaca ggtattgcaa
    45901 caaaagaaga attacatgaa gctgatatta ttttaaatag tgcggcagat attttagaag
    45961 ctttaaatta aaaagaaaga catagtgtat atgtgaatta atgtattcga tagaattgat
    46021 aatgtaatcg atgatatcta tggaatatac attgaatata aacatatacg ctatgtcttt
    46081 agtcttttat cgtgtatcta cttgtcgata tgtttgaata attcgagcaa ttttgtctat
    46141 cataggattt aaagattcgg ggtccttatg gatatcatat tcattaatat tgatacgtac
    46201 aactggacat gcattaaagc tattaatcca atcgtcatag cgtttaaata gctttttcca
    46261 gtattcaggg tctgtattaa tttccatttc gcgaccacgt tcaataatac gatcaatgac
    46321 ctcatcatag ttacattcta aataaatcat tacatcaggt ttaggaaaat aaggtgtcat
    46381 gaccatggca ttaaataagt ctgaatatgt tttgaaatct tctttactca ttgtgccttc
    46441 ttcttcatgc atttttgcaa aaatatcaac atcttcataa attgatcgat cttggacaaa
    46501 gccaccacca tattcaaaca tacgcttttg ttctttaaaa cgttcagcta agaagtaaat
    46561 ttgcaaatgg aaactccatc gttcaaaatc gctgtaaaat ttatctaaat atggattatg
    46621 ttcgacattt tcaaaagacg ttttaaagtt taatttatct gcaagtgctt gcgttagtgt
    46681 tgattttcca acaccaactg tacctgcaat ggttataatg gcattttgtg gaataccgta
    46741 attattcatt ggtaatatct cctatcatag gtaatataat atgtaatata tcttcgtaat
    46801 cttgttcatt tttaagaaaa tcaatagaag ttgtatcgat taaaactaca tttgaaccat
    46861 tactttgtaa ggactcataa tactcacgat aatctttttt taactttaac agatattcat
    46921 cttctatttg atgctcaaaa ctacggttac gtttagcaat tctagatttt aacacatcaa
    46981 ggtctgcatc taaaaagata atcatattcg gcataatcat atcttcagtt aaaatatcat
    47041 aaattttact gaatttctga aattcaacag aactcaaagt atttttagca aatatcttat
    47101 ttttatgtat atgataatca ctaactacac cttgatttag ttgtgttaca tcttgaaatt
    47161 gcttatatct attgcataaa aagaacattt cagtttgaaa actccattta gagatatctt
    47221 cataaaagtc tgataaaaat ggattttctg tgatgatttc tttttcttca taaaaatcta
    47281 aagtttgact taatttgtgt gcaagtgaag atttacctac gccaatagga ccttcaattg
    47341 ctataaaagg tttgttcata ttcacatctc caaatgttaa aatagacatt gagtattgta
    47401 ccataagtga ggtatctgga cataaatgac aaatgatata tattttatga cattagcgat
    47461 tgaagaagct aaaaaagcag ctcaactagg cgaagtacct ataggtgcta tcatcactaa
    47521 agatgatgaa gttatcgcta gagcacataa tttaagagaa acactacaac aaccaacggc
    47581 gcatgctgaa catattgcaa ttgaacgtgc agccaaagtg ttaggtagtt ggcgtttaga
    47641 aggttgcaca ttatatgtaa ccttagaacc atgtgtcatg tgcgcaggaa caattgtaat
    47701 gagtcgcatt ccaagagtcg tctatggcgc agatgatcct aaaggtggtt gtagtggcag
    47761 tttaatgaat ttattgcaac aatctaattt taatcatcgt gcaattgttg ataaaggtgt
    47821 acttaaagaa gcatgtagca cattattaac aacatttttt aaaaacttaa gagccaataa
    47881 gaaatccacc aattagacga tagtacatac taattaaaat ttgttagaat tacattatat
    47941 gataaattaa tgacaatata aatgttaata gaaaagtatg tgcgctgagt atatattctt
    48001 atttaagaac aagattttaa atttacgaaa cgaggtaaca taatgataaa actaatagcc
    48061 actgatatgg atggtacgct acttaatgca gcacatgaaa tttctcaacc taatattgat
    48121 gcgattaaat acgctcaaga acaagggata acggttgtta tcgcgacagg tcgagcattt
    48181 tatgaagcac aagcaccagt tgctgacaca gatttaacag taccatatat ttgtttgaat
    48241 ggtgctgaag tacgtgatga aactttcaat gtaatgagca cttcacacct taataaatcg
    48301 ttagtacaca aaattacaaa tgttttaaaa gatgcaggta tttattatca agtatacacg
    48361 agtcgtgcga tttatactga agatccacaa agagatttag acatttacat agatattgct
    48421 gagcgtgcag gtcaacatgc aaacgttgag cgtattaaaa atggtattca aagacgcata
    48481 gataatggta cgttgaaagt tgttgataat tatgatgcta ttgaaaacat acctggtgaa
    48541 ttaattatga aaatattagc atttgatgga aatttagaaa aaattgacaa agctagtaaa
    48601 attttagctg aatctccgaa tttagctata tcatcatctt cgagaggaaa tatagaaata
    48661 acgcattcag atgcacaaaa aggtattgcg ctagaaacaa ttgccgaaag attagggatt
    48721 gaaatgaaag atgtcatggc aataggtgac aatttaaatg acttatcaat gttagagaaa
    48781 gttggctatc cagttgcgat ggaaaatggt gcagaagaag ttaaaaaaat agcgaaatat
    48841 gtcacagata cgaatgaaaa tagtggtgtt ggaaaagcta ttatgaaatt attacgtgaa
    48901 caacaagttt aataaaaaaa gaggggtcaa atatgaaagg attaattatt attggcagtg
    48961 cacaagtgaa ttcacataca agtgcactag caagatactt aactgagcat tttaaaacac
    49021 atgatattga agcggaaata ttcgatttag cagaaaaacc gttaaatcaa ttagattttt
    49081 caggaacaac accgtctatt gatgaaatca aacaaaatat gaaagattta aaagagaaag
    49141 caatggcggc ggacttttta atattaggaa cgccaaacta tcatggttca tattctggaa
    49201 tattgaaaaa tgcattagat catctaaata tggattattt taaaatgaaa cctgtaggct
    49261 taataggaaa tagtggtggt attgttagtt cagagccatt gtcacattta agagtaatcg
    49321 tcagaagttt actaggcatt gctgtaccaa ctcaaatagc aacacatgat tctgattttg
    49381 ctaaaaatga agatggttca tattacttaa atgatagtga attccaatta cgagcaagat
    49441 tatttgtcga tcaaattgta tcttttgtga ataatagtcc atatgaacat ttaaaataat
    49501 attaaaaaat atgtaaatat acattaaaaa taggtatgta gcttaaggta tttcattgag
    49561 aatgctttta agtcacatgc ctattttttg ttctaatgca ccaatagtaa gcctttgaga
    49621 ttactgttgt gagcaatgtt attaattaaa ataagatgta atagcgaatt gaaaacaagc
    49681 ttagattaaa agtgagtttt aaaaatatag ataaataatt taaagcaatt aaagaaaaaa
    49741 agtattaaaa attgcaattc ttaaactgga attcata
//
LOCUS       DAKPJH010000005        48011 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.005, whole genome shotgun sequence.
ACCESSION   DAKPJH010000005 DAKPJH010000000
VERSION     DAKPJH010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 48011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48011
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.005"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            91..963
                     /gene="dprA"
                     /locus_tag="OY092_000231"
     CDS             91..963
                     /gene="dprA"
                     /locus_tag="OY092_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000593194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HCX1075207.1"
                     /translation="MIRLFLLKLYWSHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEW
                     VNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYITYMDSEYPVLLKEIYQFPLLLF
                     YKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
                     IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNR
                     IISGLSKGVLITEAKEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAK
                     VVLNANDIFEDYYI"
     gene            1137..3212
                     /gene="topA"
                     /locus_tag="OY092_000232"
     CDS             1137..3212
                     /gene="topA"
                     /locus_tag="OY092_000232"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HCX1075208.1"
                     /translation="MTLADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQM
                     GVDTEDNYEPKYITIRGKGPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILEL
                     EDSKENRVVFNEITKDAVKESFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKV
                     KKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPF
                     KLKTKKDVEKITAALDGDQFEITNVTKKEKTRNPANPFTTSTLQQEAARKLNFKARKT
                     MMVAQQLYEGIDLKKQGTIGLITYMRTDSTRISDTAKAEAKQYITDKYGESYTSKRKA
                     SGKQGDQDAHEAIRPSSTMRTPDDMKSFLTKDQYRLYKLIWERFVASQMAPAILDTVS
                     LDITQGDIKFRANGQTIKFKGFMTLYVETKDDSDSEKENKLPKLEQGDKVTATQIEPA
                     QHYTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEI
                     VHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDITWRKVIDGFFSSFKQDVERAEEEME
                     KIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFPDCRNTKAIVKSIGVKCPKCND
                     GDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDCPKCNQYLVENKKGKTTQVICSN
                     CDYKEAAQK"
     gene            3368..4675
                     /gene="trmFO"
                     /locus_tag="OY092_000233"
     CDS             3368..4675
                     /gene="trmFO"
                     /locus_tag="OY092_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HCX1075209.1"
                     /translation="MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHT
                     DKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFS
                     GYITETLKNHENITVINEEINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDA
                     AAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEK
                     EKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNI
                     VGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQ
                     FAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKN
                     FQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL"
     gene            5092..5988
                     /gene="xerC"
                     /locus_tag="OY092_000234"
     CDS             5092..5988
                     /gene="xerC"
                     /locus_tag="OY092_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HCX1075210.1"
                     /translation="MNHIQEAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLQL
                     NTFEYRDARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHPKK
                     EKYLPQFFYEEEMEALFKTVEEDTSKSLRDRVILELLYATGIRVSELVNIKKQDIDFY
                     ANGVTVLGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLIVNMKGEAITERGV
                     RYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHV
                     SNQQLRKVYLNAHPRAKKENET"
     gene            5985..6530
                     /gene="hslV"
                     /locus_tag="OY092_000235"
     CDS             5985..6530
                     /gene="hslV"
                     /locus_tag="OY092_000235"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HCX1075211.1"
                     /translation="MSNTTLHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVR
                     RLYEDKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEA
                     MLIVMDKDAILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYE
                     SLKVAADICVFTNDNIVVETL"
     gene            6596..7999
                     /gene="hslU"
                     /locus_tag="OY092_000236"
     CDS             6596..7999
                     /gene="hslU"
                     /locus_tag="OY092_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HCX1075212.1"
                     /translation="MDTAGIRLTPKEIVSKLNEYIVGQNDAKRKVAIALRNRYRRSLL
                     DEESKQEISPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVES
                     MVRDLVDVSVRLVKAQKKSLVQDEATAKANEKLVKLLVPSMKKKASQTNNPLESLFGG
                     AIPNFGQNNEDEEEPPTEEIKTKRSEIKRQLEEGKLEKEKVRIKVEQDPGALGMLGTN
                     QNQQMQEMMNQLMPKKKVEREVAVETARKILADSYADELIDQESANQEALELAEQMGI
                     IFIDEIDKVATNNHNSGQDVSRQGVQRDILPILEGSVIQTKYGTVNTEHMLFIGAGAF
                     HVSKPSDLIPELQGRFPIRVELDSLSVEDFVRILTEPKLSLIKQYEALLQTEEVTVNF
                     TDEAITRLAEIAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPSMPNAVVDITPQYVD
                     DKLKSISTNKDLSAFIL"
     gene            8024..8797
                     /gene="codY"
                     /locus_tag="OY092_000237"
     CDS             8024..8797
                     /gene="codY"
                     /locus_tag="OY092_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HCX1075213.1"
                     /translation="MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSR
                     RGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLMEVKQTESNIDIDNVLTVFPPEN
                     RELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
                     EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIV
                     NALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELEKSK"
     gene            8848..8940
                     /locus_tag="OY092_000238"
     CDS             8848..8940
                     /locus_tag="OY092_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075214.1"
                     /translation="MAVVNEMTLMIMLKSFLYFCLIFNQIDIPH"
     gene            9139..9906
                     /gene="rpsB"
                     /locus_tag="OY092_000239"
     CDS             9139..9906
                     /gene="rpsB"
                     /locus_tag="OY092_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HCX1075215.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLT
                     NYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQA
                     LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA
                     DAILEGQQGVSNEEVAAEQNIDLDEKEKSEETEATEE"
     gene            9940..10053
                     /locus_tag="OY092_000240"
     CDS             9940..10053
                     /locus_tag="OY092_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075216.1"
                     /translation="MGDKILMLITFFKKKIEANYKYSIRVLAILPIIMLKS"
     gene            10088..10969
                     /locus_tag="OY092_000241"
     CDS             10088..10969
                     /locus_tag="OY092_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HCX1075217.1"
                     /translation="MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREK
                     GIAKAAKKADRIAAEGLVHVETKGNDAVIVEINSETDFVARNEGFQELVKEIANQVLD
                     TKAETVEALMETTLPNGKSVDERIKEAISTIGEKLSVRRFAIRTKTDNDAFGAYLHMG
                     GRIGVLTVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEG
                     KPENIVEKMVEGRLRKYLQEICAVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEG
                     MEKREENFADEVKGQMK"
     gene            11106..11828
                     /locus_tag="OY092_000242"
     CDS             11106..11828
                     /locus_tag="OY092_000242"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HCX1075218.1"
                     /translation="MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEVAK
                     MDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
                     LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVIL
                     MGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFS
                     IMEEGNIKRAVMGEKIGTLITK"
     gene            11847..12401
                     /gene="frr"
                     /locus_tag="OY092_000243"
     CDS             11847..12401
                     /gene="frr"
                     /locus_tag="OY092_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HCX1075219.1"
                     /translation="MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYY
                     GAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVP
                     ALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQ
                     EATDNSIKEIDQMIADKEKDIMSV"
     gene            12774..13544
                     /locus_tag="OY092_000244"
     CDS             12774..13544
                     /locus_tag="OY092_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HCX1075220.1"
                     /translation="MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKM
                     PRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKT
                     FLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVH
                     SIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSY
                     SEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE"
     gene            13551..14333
                     /locus_tag="OY092_000245"
     CDS             13551..14333
                     /locus_tag="OY092_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HCX1075221.1"
                     /translation="MKVRTLTAIIALIVFLPILLKGGLVLMIFANILALIALKELLNM
                     NMIKFVSVPGLISAVGLIIIMLPQHAGPWVQVIQLKSLIAMSFIVLSYTVLSKNRFSF
                     MDAAFCLMSVAYVGIGFMFFYETRSEGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLW
                     PVISPNKTIEGFIGGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQLGDLVES
                     GFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLIQA"
     gene            14545..15831
                     /gene="rseP"
                     /locus_tag="OY092_000246"
     CDS             14545..15831
                     /gene="rseP"
                     /locus_tag="OY092_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HCX1075222.1"
                     /translation="MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMG
                     PKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILD
                     DHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
                     RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGL
                     QKGDKIVQIGKYKISEFDDVDKALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTK
                     VSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDML
                     NGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFR
                     KPVNKKAETTIIAIGAIFMVVIMILVTWNDIRRYFL"
     gene            15851..17554
                     /locus_tag="OY092_000247"
     CDS             15851..17554
                     /locus_tag="OY092_000247"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HCX1075223.1"
                     /translation="MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLP
                     LATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGR
                     QFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDA
                     YSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGE
                     DTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPIEKIETPNVKTAQELADFLGRPVDE
                     IVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLG
                     PVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDAYGDFRFILEGEKL
                     SDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSA
                     IVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTKFDVLYDDRQE
                     RAGVKFNDADLIGLPLRIVVGKRASEGIVEVKERLTGDSEEVHIDDLITVITNKYDNL
                     K"
     gene            17818..22128
                     /locus_tag="OY092_000248"
     CDS             17818..22128
                     /locus_tag="OY092_000248"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HCX1075224.1"
                     /translation="MTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEF
                     HITLPQFLAHEDYLLFINAIEQEFKDIANVTCRFTVTNGTNQDEHVIKYFGHCIDQTA
                     LSPKVKGQLKQKKLIMSGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIF
                     ETNDNDQEQNLASLEAHIQEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGK
                     PIQIENIKPIESIIEEEYKVAIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFT
                     RKNKDDLEHFKALSVGKWVRAQGRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRV
                     EFHLHTAMSQMDGIPNISAYVKQAADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMI
                     YGMEGMLVDDGVPIAYKPQDVVLKDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEI
                     IDKFERFSNPHERLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASF
                     DMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAI
                     YDTEATAYIFIKMVQQMKELGVLNHNEINKKLSNEDAYKRARPSHVTLIVQNQQGLKN
                     LFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVGTACDEGELFTAVMQKDQSQVEKIA
                     KYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRLIHAGDTAGIPVIATGNAHYLFE
                     HDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEFHFLGEEKAHEIVVKNTNELA
                     DRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGEDLPQIVIDRLEKELKSIIG
                     NGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPNCKR
                     SEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKGDKVPDIDLNFSGEY
                     QPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKRGAEIDRLVKGC
                     TGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFHSIHDNVLKLD
                     ILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTENEILCKTGTFGVP
                     EFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSSVIGCRD
                     DIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIKYMFP
                     KAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDMYS
                     RYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
                     LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
                     "
     gene            22416..22883
                     /gene="rimP"
                     /locus_tag="OY092_000249"
     CDS             22416..22883
                     /gene="rimP"
                     /locus_tag="OY092_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HCX1075225.1"
                     /translation="MSKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKE
                     GGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFV
                     SLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI"
     gene            22904..24079
                     /gene="nusA"
                     /locus_tag="OY092_000250"
     CDS             22904..24079
                     /gene="nusA"
                     /locus_tag="OY092_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HCX1075226.1"
                     /translation="MSSNELLLATEYLEKEKKIPRAVLIDAIEAALITAYKKNYDSAR
                     NVRVELNMDQGTFKVIARKDVVEEVFDDRDEVDLSTALVKNPAYEIGDIYEEDVTPKD
                     FGRVGAQAAKQAVMQRLRDAEREILFEEFIDKEEDILTGIIDRVDHRYVYVNLGRIEA
                     VLSEAERSPNEKYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYD
                     GTVIVKSVAREAGDRSKISVFSENNDIDAVGACVGAKGARVEAVVEELGGEKIDIVQW
                     NEDPKVFVKNALSPSQVLEVIVDETNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGW
                     KIDIKSETDAREAGIYPVVEAEKVTEEDIALEDADTTESTEEVNDVSVETNVEKESE"
     gene            24100..24384
                     /locus_tag="OY092_000251"
     CDS             24100..24384
                     /locus_tag="OY092_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HCX1075227.1"
                     /translation="MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQG
                     RGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK"
     gene            24381..24698
                     /locus_tag="OY092_000252"
     CDS             24381..24698
                     /locus_tag="OY092_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HCX1075228.1"
                     /translation="MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDA
                     SDNTAKLITDKCKSYKVPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEY
                     HKE"
     gene            24703..26820
                     /gene="infB"
                     /locus_tag="OY092_000253"
     CDS             24703..26820
                     /gene="infB"
                     /locus_tag="OY092_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HCX1075229.1"
                     /translation="MSKQRIYEYAKELNLKSKEIIDELKSMNIEVSNHMQALEDDQIK
                     ALDKKFKKEQKNDNKQSTQNNHQKSNNQNQNKGQQKDNKKNQQQNNKGNKGNKKNNRN
                     NKKNNKNNKPQNQPAAPKEIPSKVTYQEGITVGEFADKLNVESSEIIKKLFLLGIVAN
                     INQSLNQETIELIADDYGVEVEEEVVINEEDLSIYFEDEKDDPEAIERPAVVTIMGHV
                     DHGKTTLLDSIRHTKVTAGEAGGITQHIGAYQIENDGKKITFLDTPGHAAFTTMRARG
                     AQVTDITILVVAADDGVMPQTIEAINHAKEAEVPIIVAVNKIDKPTSNPDRVMQELTE
                     YGLIPEDWGGETIFVPLSALSGDGIDDLLEMIGLVAEVQELKANPKNRAVGTVIEAEL
                     DKSRGPSASLLVQNGTLNVGDAIVVGNTYGRIRAMVNDLGQRIKTAGPSTPVEITGIN
                     DVPQAGDRFVVFSDEKQARRIGESRHEASIVQQRQESKNVSLDNLFEQMKQGEMKDLN
                     VIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIIGFNV
                     RPDSGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV
                     SKVGTIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGIT
                     IENYNDLKEGDVIEAFEMVEIKR"
     gene            27206..27556
                     /gene="rbfA"
                     /locus_tag="OY092_000254"
     CDS             27206..27556
                     /gene="rbfA"
                     /locus_tag="OY092_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HCX1075230.1"
                     /translation="MSSMRAERVGEQMKKELMDIINNKVKDPRVGFITITDVVLTNDL
                     SQAKVFLTVLGNDKEVENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGN
                     KIERMIQDLHKQDR"
     gene            27725..28642
                     /gene="truB"
                     /locus_tag="OY092_000255"
     CDS             27725..28642
                     /gene="truB"
                     /locus_tag="OY092_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HCX1075231.1"
                     /translation="MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAG
                     VLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDI
                     DRLLESFKGIIEQIPPMYSSVKVNGRKLYEYARNNETVERPKRKVNIKDIGRISELDF
                     KENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQI
                     KELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVF
                     IDDDSEKVLAIYMVHPTKESEIKPKKVFN"
     gene            28657..29628
                     /gene="ribF"
                     /locus_tag="OY092_000256"
     CDS             28657..29628
                     /gene="ribF"
                     /locus_tag="OY092_000256"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibF"
                     /protein_id="HCX1075232.1"
                     /translation="MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEI
                     AEARSLKKAVMTFDPHPSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRF
                     ANVSVEDFVENYIIKNNVKEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIEN
                     EKISTTSIRQDLINGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYL
                     LPRKGVYAVSIEIGTENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERV
                     TVNWHHFLRPEIKFDGIDPLVKQMNDDKSRAKYLLAVDFGDEVAYNI"
     gene            29743..30012
                     /gene="rpsO"
                     /locus_tag="OY092_000257"
     CDS             29743..30012
                     /gene="rpsO"
                     /locus_tag="OY092_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HCX1075233.1"
                     /translation="MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLR
                     THKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR"
     gene            30382..32478
                     /gene="pnp"
                     /locus_tag="OY092_000258"
     CDS             30382..32478
                     /gene="pnp"
                     /locus_tag="OY092_000258"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HCX1075234.1"
                     /translation="MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLST
                     ATASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDDATLTARLIDRPIRPL
                     FPKGYKHDVQIMNMVLSADPDCSPQMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGK
                     YIINPTVEEKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIQRLVEF
                     QQQIVDHIQPVKQEFIPAERDEALVERVKSLTEEKGLKETVLTFDKQQRDENLDNLKE
                     EIVNEFIDEEDPENELLIKEVYAILNELVKEEVRRLIADEKIRPDGRKPDEIRPLDSE
                     VGILPRTHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEEEKRFMHHYNFPNFSVG
                     ETGPVRAPGRREIGHGALGERALKYIIPDTADFPYTIRIVSEVLESNGSSSQASICGS
                     TLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITA
                     IQMDIKIDGLTREIIEEALEQARRGRLEIMNHMLQTIDQPRTELSAYAPKVVTMTIKP
                     DKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQAMINRAREIIEEITREAE
                     VGQTYQATVKRIEKYGAFVGLFPGKDALLHISQISKNRIEKVEDVLKIGDTIEVKITE
                     IDKQGRVNASHRALEE"
     gene            32714..34387
                     /locus_tag="OY092_000259"
     CDS             32714..34387
                     /locus_tag="OY092_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002455407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HCX1075235.1"
                     /translation="MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMF
                     PEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLT
                     IALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGA
                     IVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHM
                     YDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFD
                     IPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI
                     TASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQ
                     GEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIG
                     DVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEE
                     KVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI"
     gene            34644..37013
                     /locus_tag="OY092_000260"
     CDS             34644..37013
                     /locus_tag="OY092_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HCX1075236.1"
                     /translation="MAQAKKKSTAKKKTTSKKRTNSRKKKNDNPIRYVIAILVVVLMV
                     LGVFQLGIIGRLIDSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQ
                     IALLFVSQLVFHFNSGIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLIS
                     LFGVCIITILLLCSSVILLTNHQHREVAKVVLENIKAWFGSFNEKMSEKNQEKQLKRE
                     EKARLKEEQKARQNEQPQIKDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFD
                     AENSSNNIVNHHQADQQEQLTEQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAK
                     QKATSKAEVQRKGQVLENTLKDFGVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLH
                     NDIALALAAKDVRIEAPIPGRSAVGIEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGR
                     DISGDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVE
                     LNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQN
                     QELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRVTQMARAAGIHLIVATQRPSV
                     DVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGGAEKLLGKGDMLYVGNGDSSQTRIQG
                     AFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDKSEMKSEDALYDEAYLFVVEQQKA
                     STSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVLIDLNNDEV"
     gene            37018..37731
                     /locus_tag="OY092_000261"
     CDS             37018..37731
                     /locus_tag="OY092_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1075237.1"
                     /translation="MSEMNAVYNVKQYILNLIKQNKLEYGDQLPSNLSIARELNVKTD
                     DVYEAIQALITEQVIKDNFEEGTSVKSLPPFFYPLNELISIGQMIKNAGFECGTEYLN
                     FDEQPATMLDANLLSVEEGYPVTIIERLRTADGEPVVYCLDKIAKKELTCTEYQMSNG
                     SILSAIKEQSNHNICYADTEIEAVNYEPRISEVLNASPHEGLILLKITHYNESDEPIL
                     YSLNYMKNSLVQFKITRKI"
     gene            37762..39027
                     /locus_tag="OY092_000262"
     CDS             37762..39027
                     /locus_tag="OY092_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCX1075238.1"
                     /translation="MSRQSQPNIHIKVSPTTKFKTTTIVFKFMAPLEYDTITARSLLS
                     KLLVRATKKWPTDKSFNNHLADLYGAYVNSTISKFKDQHVITFSLEIVNERYLRNGES
                     LFNQGLDLLHEIIWNPLIENKAFNDNFVNQEKTLLAKKIEAMVDNKAQYSFLKLLDHM
                     FENEAYKYLSTGQLEQIPHITAETLYHTYQSMINNDQCSVYVVGNVEPESVEKQIREK
                     FALKPFDKHQFQHSTHHLHDEEVDYIVEYDDVDQAKLNMGYRFPTQYGQSGYAAFVVF
                     NMMFGGDPSSVLFNEVREKQSLAYSIHSQIDGKNGYLFVLSGVSSDKYETAKDTIISE
                     FEKIKAGDFTEEKLELAKKVIISHRYESEDRPKSIIEIMHNQILLEQPQSKETFINDI
                     QKVSREDIVTVAEKAFLDTIYVLTKGGDK"
     gene            39027..40313
                     /locus_tag="OY092_000263"
     CDS             39027..40313
                     /locus_tag="OY092_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCX1075239.1"
                     /translation="MKERYYELIDERVFEQELENGLRLFIIPKPGFQKTFVTYTTQFG
                     SLDNQFKPLGQDQFVTVPDGVAHFLEHKLFEKEEEDLFTAFAEDNAQANAFTSFDRTS
                     YLFSATDNIENNIKRLLTMVETPYFTKETVDKEKGIIAEEIKMYQEQPGYKLMFNTLR
                     AMYQQHPIRVDIAGSVESIYDITKDDLYLCYETFYHPSNMVLFVVGDVNPEEICRIVK
                     QHEDARNKVNQPKIERGLVDEPEDVKEAFVTESMKIQSPRLMLGFKNKPLQEAPQKYV
                     QRDLEMSLFFELIFGEETDFYQNLLNEGLIDDTFGYQFVLEPTYSFSIVTSATEEPDK
                     LKKLLLDELRDKKGNFQDAQAFELLKKQFIGEFISSLNSPEYIANQYTKLYFEGVSVF
                     DMLDIVENITLDSINETSSLYLNLDQQVDSRLEIKK"
     gene            40313..41017
                     /locus_tag="OY092_000264"
     CDS             40313..41017
                     /locus_tag="OY092_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HCX1075240.1"
                     /translation="MKALVLGGSGSIGSEIVKQLLTDGFEVYVQYYRTDINELTSKFN
                     DDKVHFIQTDLSQTTDIDKTFGDIKSLDCLIYASGQSLYGVLQDMKDHDIDACYQLNV
                     LQLIRLCRYFVDVLRQSDNGRIIVISSIWGETGASMETIYSTMKSAQLGFVKALSQEL
                     ALTSVTVNAIAPGFVAGNMASEWQEDELQAMITELPQQRLVLPSEVAHTCAYLYHPNA
                     RSVTGTIQKVNGAWYI"
     gene            41122..41949
                     /locus_tag="OY092_000265"
     CDS             41122..41949
                     /locus_tag="OY092_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfK family protein"
                     /protein_id="HCX1075241.1"
                     /translation="MTVAEKKEWYLEYEIEINRPGLLGDVSSLLGMLGISIVTINGVD
                     QGKRGLLIKTDNLEKVERFEQIARGINEIEITKLKKPELRDRLAVRHGRYIEQDAKDK
                     KTFRFEREDLGLLVDFLAELFKEEGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFIS
                     STLIKQTVRSSLIKGEYDANHVYIIDGAVTARESNPKHQELVNEVMTLPSIKVVEHPD
                     LFVETSTCTMEDFDYIIELRENENQEIHYEEMKKQTVQSKNNLDFGDPFGGGFGFFE"
     gene            41968..42360
                     /locus_tag="OY092_000266"
     CDS             41968..42360
                     /locus_tag="OY092_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1075242.1"
                     /translation="MKTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQL
                     PNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEWDEVITVFNNNKDLDYKSKS
                     KEPIQLLVIMGITVLITLLLWIMLVLIF"
     gene            42394..42972
                     /gene="pgsA"
                     /locus_tag="OY092_000267"
     CDS             42394..42972
                     /gene="pgsA"
                     /locus_tag="OY092_000267"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HCX1075243.1"
                     /translation="MNIPNQITVFRVVLIPVFILFALVDFGFGNVSFLGGYEIRIELL
                     ISGFIFILASLSDFVDGYLARKWNLVTNMGKFLDPLADKLLVASALIVLVQLGLTNSV
                     VAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAITWLLLGDPLATLIGL
                     SLGQILLYIGVIFTILSGIEYFYKGRDVFKQK"
     gene            43197..44348
                     /locus_tag="OY092_000268"
     CDS             43197..44348
                     /locus_tag="OY092_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HCX1075244.1"
                     /translation="MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGD
                     NKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESY
                     FEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
                     KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIR
                     LTANADSKEQAQSLIQPVKQEILDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITN
                     GALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLE
                     YDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN"
     gene            44513..45556
                     /gene="recA"
                     /locus_tag="OY092_000269"
     CDS             44513..45556
                     /gene="recA"
                     /locus_tag="OY092_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HCX1075245.1"
                     /translation="MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSV
                     TLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEY
                     AQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
                     THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYS
                     SVRLEVRRAEQLKQGQEIVGNRTKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDL
                     GVENDIVDKSGAWYSYNGERMGQGKENVKMYLKENPQIKEEIDRKLREKLGISDGDVE
                     ETEDTPKSLFDEE"
     gene            45910..47469
                     /gene="rny"
                     /locus_tag="OY092_000270"
     CDS             45910..47469
                     /gene="rny"
                     /locus_tag="OY092_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HCX1075246.1"
                     /translation="MNLLSLLLILLGIILGVVGGYVVARNLLLQKQSQARQTAEDIVN
                     QAHKEADNIKKEKLLEAKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSD
                     LLDKKDEILEQKESKIEEKQQQVDAKESSVQTLIMKHEQELERISGLTQEEAINEQLQ
                     RVEEELSQDIAVLVKEKEKEAKEKVDKTAKELLATAVQRLAADHTSESTVSVVNLPND
                     EMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDG
                     RIHPGRIEDMVEKARKEVDDIIREAGEQATFEVNAHNMHPDLVKIVGRLNYRTSYGQN
                     VLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKY
                     GENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETL
                     SESYDGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEDELQYPGHIKVTV
                     VRETRAVEYAK"
     gene            complement(47723..>48011)
                     /locus_tag="OY092_000271"
     CDS             complement(47723..>48011)
                     /locus_tag="OY092_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1075247.1"
                     /translation="FKAQVNQKLSEPETKKIYSQRKIVVESVVGFMKAILGFTRMSVR
                     GINKVKRDLGFVLTALNIRKIAAQRAVHYKIHIRKADFYQIINRNQLFYIA"
BASE COUNT        17721 a         6543 c         9304 g        14443 t
ORIGIN      
        1 aataacatta catcgacaat gtttttgtat tagaaatgta aaacaaaaat agaatatgat
       61 tttgtatgat tacaaaaagg agttgattta ttgattagac tatttttgct taagttatac
      121 tggtcacact tttcgactaa acaaattcat caatttttaa tggcatatcc taatgtaatt
      181 aaagaggagg gaagaaaaaa agatagttat ttatgtgaat gggtgaatag ggaagaaaat
      241 gttcatttat tacgtaaata ctatgctttt ataaaacttg atcataacga tattattaaa
      301 gaactgcaga aattaaaagt aagttacatt acatatatgg attctgaata cccagtgcta
      361 ttaaaagaaa tatatcaatt tccattactt cttttctata aagggaacat caaattaata
      421 aataatatgc atcatttggc agtagtaggt gcaagagatt ctacaagtta tacccaacag
      481 tctttagaat ttttattatc aaatgataaa agcaaatatt taacaattgt ttccggcctt
      541 gctcaaggag ctgatgcaat ggcacatcaa atagctttaa aatacaatct ccctacaatt
      601 gcagttttag cctttggcca tcaaacacat tatcccaaaa gtacattagc attaagaaat
      661 aaaatagaag aaaaaggttt agttatatcc gaatatccac cacatacacc aattgctaaa
      721 tatagatttc ctgagcgcaa tagaattatc agcggtttgt caaaaggggt tttaattact
      781 gaggctaagg aacaaagtgg cagtcacatc acgatagatt ttgcattaga gcaaaataga
      841 aatgtttatg ttttacctgg atctatgttt aatcctatga caaaaggtaa tttattacgt
      901 atccaagaag gtgctaaggt agtattaaac gctaatgata tatttgaaga ctactatatt
      961 taaaactaaa aataacgagt tgcttcatat ttcttttgtt accctttgta atttattttt
     1021 taataaaatc tataaaaaat agacagggaa aatgatttgt ttagatataa aacgttgaca
     1081 aaagcaaaat taagcgttta tcatttatct ttagtaatta gattagcgag ggggaaatga
     1141 cattggcaga taatttagtc attgttgaat cgcctgcaaa agcaaaaacc attgaaaagt
     1201 atttaggtaa gaaatataaa gttatagctt caatgggaca cgtcagagac ttaccaagaa
     1261 gtcaaatggg tgtcgacact gaagataatt acgaaccaaa atatataaca atacgcggaa
     1321 aaggtcctgt tgtaaaagaa ttgaaaaagc atgcaaaaaa agcgaaaaac gtctttctcg
     1381 caagtgaccc cgaccgtgaa ggtgaagcaa ttgcttggca tttatcaaaa attttagagc
     1441 ttgaagattc taaagaaaat cgcgttgttt tcaacgaaat aactaaagac gctgttaaag
     1501 aaagttttaa aaatcctaga gaaattgaaa tgaacttagt cgatgcacaa caagcgcgtc
     1561 gaatattaga tagattggtt ggctataaca tctcgccagt tctatggaaa aaagtaaaaa
     1621 aagggttgtc agcgggtcga gttcaatctg ttgcacttcg tttagtcatt gaccgtgaaa
     1681 atgaaattcg aaactttaaa ccagaagaat attggactat tgaaggagaa tttagataca
     1741 aaaaatcaaa attcaatgct aaattccttc attataaaaa taaacctttt aaattaaaaa
     1801 cgaaaaaaga tgttgagaaa attacagctg cattagatgg agatcaattc gaaattacaa
     1861 acgtgactaa aaaagaaaaa acgcgtaatc cagcaaaccc atttacaact tctacattac
     1921 aacaagaggc ggcacgtaaa ttaaacttta aagctagaaa aacaatgatg gtcgcacaac
     1981 aattatatga aggtatagat ttgaaaaaac aaggtacgat tggtttaata acatatatga
     2041 gaaccgattc tacacgtatt tcagatactg ccaaagctga agcaaaacag tatataactg
     2101 ataaatacgg tgaatcttac acttctaaac gtaaagcatc agggaaacaa ggtgaccaag
     2161 atgcccatga ggctattaga ccttcaagta ctatgcgtac gccagatgat atgaagtcat
     2221 ttttaacgaa agaccaatac cgattataca aattaatttg ggaacgattt gttgctagtc
     2281 aaatggctcc agcaatactt gatacagtct cattagacat aacacaaggt gacattaaat
     2341 ttagagcgaa tggtcaaaca atcaagttta aaggatttat gacactctat gtagaaacta
     2401 aagatgatag tgatagcgaa aaggaaaata aactgcctaa attagagcaa ggtgataaag
     2461 tcacagcaac tcaaattgaa ccagctcaac actatacaca accacctcca agatatactg
     2521 aggcgagatt agtaaaaaca cttgaagaat tgaaaattgg gcgaccatca acatatgcac
     2581 cgacaataga tacgattcaa aagcgtaact atgtcaaatt agaaagtaag cgttttgttc
     2641 ctactgagtt gggagaaata gttcatgaac aagtgaaaga atacttccca gagattattg
     2701 atgtggaatt cacagtgaat atggaaacgt tacttgataa gattgcagaa ggcgacatta
     2761 catggagaaa agtaatcgac ggtttcttta gtagctttaa acaagatgtt gaacgtgctg
     2821 aagaagagat ggaaaagatt gaaatcaaag atgagccagc cggtgaagac tgtgaagttt
     2881 gtggttctcc tatggttata aaaatgggac gctatggtaa gttcatggct tgctcaaact
     2941 tcccggattg tcgtaataca aaagcgatag ttaagtctat tggtgttaaa tgtccaaaat
     3001 gtaatgatgg tgacgtcgta gaaagaaaat ctaaaaagaa tcgtgtcttt tatggatgtt
     3061 cgaaatatcc tgaatgcgac tttatctctt gggataagcc gattggaaga gattgtccaa
     3121 aatgtaacca atatcttgtt gaaaataaaa aaggcaagac aacacaagta atatgttcaa
     3181 attgcgatta taaagaggca gcgcagaaat aatattttta tttcctagag acaatttaag
     3241 aatgttaaat agaatcatta gtgaatctta ttttaaagat agtaatggat taatctaaat
     3301 aagtgcggat aatataaaca taacaacata attaaaagac ataaatgaca ataaaaggag
     3361 tatagaaatg actcaaactg taaatgtaat aggtgctggt cttgccggtt cagaagcggc
     3421 atatcaatta gctgaaagag gaattaaagt taatctaata gagatgagac ctgttaaaca
     3481 aacaccagcg caccatactg ataaatttgc ggaacttgta tgttccaatt cattacgcgg
     3541 aaatgcttta actaatggtg tgggtgtttt aaaagaagaa atgagaagat tgaattctat
     3601 aattattgaa gcggctgata aggcacgagt tccagctggt ggtgcattag cagttgatag
     3661 acacgatttt tcaggttata ttactgaaac actcaaaaat catgaaaata tcacagttat
     3721 taatgaagaa attaatgcca ttccagatgg atacacaatt atcgcaacag gaccacttac
     3781 tacagaaacg cttgctcaag aaatagtgga cattactggt aaagatcaac tttatttcta
     3841 tgatgcagct gctccaatta ttgaaaaaga atctattgat atggataaag tttacttaaa
     3901 gtcccgttat gataaaggtg aagctgcata tttaaactgt cctatgactg aggatgaatt
     3961 taatcgtttt tatgatgcag tattagaagc tgaagttgcg cctgtaaatt catttgaaaa
     4021 agaaaaatat ttcgagggtt gtatgccttt tgaagtaatg gcagaacgcg gacgcaagac
     4081 attactattt ggaccaatga aaccagtagg attagaagat ccaaagactg ggaaacgtcc
     4141 ttatgcagtg gttcaattaa gacaagatga cgctgctggc acactctaca atattgtcgg
     4201 cttccaaacg catttaaaat ggggagctca aaaagaagtt attaaattaa ttccaggctt
     4261 agaaaatgtt gatattgtta gatatggtgt gatgcataga aataccttca ttaactcacc
     4321 ggacgtatta aacgagaaat atgaattgat ttcacaacca aacatacagt ttgcgggaca
     4381 aatgactggt gttgaaggtt atgtggaaag cgcagctagt ggcttagttg caggcatcaa
     4441 tcttgcgcat aaaatattag gcaaaggtga ggtagtattt ccgagagaaa ctatgattgg
     4501 aagtatggct tactatattt ctcatgctaa aaacaataag aatttccaac ctatgaatgc
     4561 taactttggg ttattaccat ctttagaaac tagaattaaa gataaaaaag aacgctatga
     4621 agcacaagct aatagagctt tggattactt agaaaatttc aaaaaaactt tataaaatag
     4681 ttagaaagac tagatatgct attcattctt aagtcatcaa cgagtaagta atgactttct
     4741 aaatggaaaa tacttatcct agtcttttta attttggaat tgttacgtat ttctgacaat
     4801 tgagaattcg cattcaaaaa atatctaaat aaataacacg caataagttg attgatgtaa
     4861 catgtaagag aatgttttaa ataaacttta tttaaaagac aatgaaataa taaatggcaa
     4921 ggctattaat aaagactttt agtaattaat ttaaaaaaga ggtattctaa ttaacaggtt
     4981 ttccgattag ttacaattat ttaattctca aaagatttag aattgattat caaattactg
     5041 taagcccttt gctgtatatg ctacaattct tattgatgga gggtaaatgt attgaatcat
     5101 attcaagaag cgtttttaaa tacattgaaa gttgaacgga atttttcgga acatacattg
     5161 aaatcatatc aagatgactt aattcagttt aatcaatttt tagaacaaga acatttacag
     5221 ttgaatactt ttgaatacag agatgctaga aattatttga gctatttata ttcaaatcat
     5281 ttgaaaagaa catctgtttc tcgtaaaatc tcaacgttaa gaactttcta tgaatattgg
     5341 atgacgcttg atgagaacat tattaatcca tttgttcaat tagtacatcc gaaaaaagaa
     5401 aaatatcttc cgcaattctt ttacgaagaa gaaatggaag cgttatttaa aactgtagaa
     5461 gaggacactt caaaaagttt acgggatcga gttattcttg aattgttata tgctacaggt
     5521 atccgtgttt cggaattagt taatattaaa aaacaagata tagattttta cgcgaatggt
     5581 gttaccgtgt taggaaaagg gagcaaagag cgctttgtac cgtttggtgc ttattgtaga
     5641 caaagcatcg aaaattattt agaacatttc aaacctattc agtcatgcaa tcatgatttt
     5701 cttattgtaa atatgaaggg tgaagcaatc actgaacgcg gtgtacgata tgttttaaat
     5761 gatattgtta aacgaacagc aggcgtaagt gagattcatc cccacaagct cagacataca
     5821 tttgcaacgc atttattgaa tcaaggtgca gacctaagaa cagtacaatc attattaggt
     5881 catgttaatt tgtcaacaac tggtaaatat acacacgtat ctaaccaaca attaagaaaa
     5941 gtgtatctaa atgcacatcc tcgagcgaaa aaggagaatg aaacatgagt aatacaacat
     6001 tacatgcaac aacaatttat gctgtaagac ataatgggaa agcagctatg gctggagatg
     6061 ggcaagtaac gcttggtcaa caagtcatca tgaaacaaac ggcaagaaaa gtgcgacgtt
     6121 tatatgaaga taaagtgtta gctggtttcg caggtagtgt agcagatgcg tttacgttat
     6181 ttgaaaaatt cgaaacaaaa ttacaacagt ttagtggtaa cttagaaaga gctgctgttg
     6241 aattggcaca agaatggcga ggcgataaac aattacgtca attagaagct atgctaattg
     6301 taatggataa agatgctatt ttagttgtca gtggaactgg cgaagttatt gccccagatg
     6361 atgaccttat cgctattgga tcaggaggca actacgcatt aagcgcagga cgtgcattga
     6421 aacgccatgc atcgcatttg tctgctgaag aaatggcata tgagagcttg aaagtagcgg
     6481 ctgatatttg tgtctttacc aacgataata ttgttgtcga aacactataa taatcagagc
     6541 acgataaata attacgagca attaatttta gttaaaagac ggaggaatga aattaatgga
     6601 tacagctgga ataagattaa ctccaaaaga aatcgtatct aaattaaatg aatacatcgt
     6661 tggacaaaat gatgctaaac gtaaagtggc aattgcccta cgtaatcgat acagaagaag
     6721 tttattagat gaggaatcaa agcaagaaat ttcacctaaa aatattttga tgattggacc
     6781 aaccggcgtt ggtaaaactg aaattgcaag aagaatggcc aaagttgtcg gcgcaccatt
     6841 tataaaagta gaagctacta aatttactga ggtaggttat gtaggacgag atgttgaaag
     6901 tatggttaga gatcttgttg atgtttcagt aaggttagtc aaggcgcaga aaaaatcatt
     6961 ggtacaagat gaagcaacag ctaaggctaa tgaaaaactt gttaagttat tagttccaag
     7021 tatgaaaaag aaagcatctc aaacgaataa tcctttagag tcacttttcg gaggtgcaat
     7081 tccaaatttc ggacaaaata acgaagatga agaagaacca cctactgagg aaattaaaac
     7141 aaaacgttct gaaattaaga gacaattaga agaaggcaaa cttgaaaaag aaaaggtaag
     7201 aattaaagtc gaacaagatc ctggtgcttt aggtatgcta ggtacaaatc aaaatcagca
     7261 aatgcaagag atgatgaatc aattaatgcc taaaaagaaa gttgagcgag aagttgctgt
     7321 tgagacggca aggaaaatac tagctgatag ttatgcggat gaactaattg atcaagaaag
     7381 cgctaaccaa gaagcacttg aattagcaga acaaatgggt atcatcttta tagatgaaat
     7441 cgacaaagtt gcgacgaata atcataatag tggtcaagat gtctcaagac aaggtgttca
     7501 aagagatatt ttacctatac ttgaaggtag cgttattcaa accaaatatg gtactgtgaa
     7561 tactgaacat atgctgttta taggtgctgg agctttccat gtatctaagc cgagtgactt
     7621 gataccagaa ttgcaaggtc gttttccgat tagagttgaa cttgatagtt tatcggtaga
     7681 agattttgta agaattttga cagaaccaaa attgtcatta attaaacaat atgaagcatt
     7741 gcttcaaaca gaagaagtta ctgtaaactt taccgatgaa gcaattactc gcttagctga
     7801 gattgcctat caagtaaatc aagatacaga caatattggt gcacgtcgac ttcatacaat
     7861 tttagaaaag atgctagaag atttatcatt cgaagcacca agtatgccga atgcagttgt
     7921 agatattacc ccacaatatg ttgatgataa attaaaatca atttcaacaa ataaagattt
     7981 aagtgcattt attctataaa aatatacaaa aggagaaaaa ttcatgagct tattatctaa
     8041 aacgagagag ttaaacacgt tacttcaaaa acacaaaggt attgcggttg attttaaaga
     8101 tgtagcacaa acgattagta gcgtaactgt aacaaatgta tttattgtat cgcgtcgagg
     8161 taaaatttta ggatcgagtc taaatgaatt attaaaaagt caaagaatta ttcaaatgtt
     8221 ggaagaaaga catattccaa gtgaatatac agaacgatta atggaagtta aacaaacaga
     8281 atcaaatatt gatatcgaca atgtattaac agttttccca cctgaaaaca gagaattatt
     8341 catagatagt cgtacaacta tcttcccaat tttaggtgga ggagaaagat taggtacatt
     8401 agtacttggt cgagtacatg atgattttaa tgaaaatgat ttggtactag gtgaatatgc
     8461 tgctacagtt attggtatgg aaatcttacg tgagaagcat agtgaagtag aaaaagaagc
     8521 gcgcgataaa gctgctatta caatggcaat taattcatta tcttattctg aaaaagaagc
     8581 aattgaacat atctttgaag aacttggcgg tacggaaggc ctattaatcg catcaaaagt
     8641 tgcagataga gttggtatta ctagatctgt aattgtaaat gcactacgta aattagaaag
     8701 tgctggtgta attgaatcac gttctttagg aatgaaaggt actttcatta aagttaaaaa
     8761 agaaaaattc ttagatgaat tagaaaaaag taagtaaaac gatgagtctg gggcataatt
     8821 caatgtccta gtcgtgacga tgttatcttg gcagtagtca acgaaatgac tttgatgatt
     8881 atgttgaagt catttcttta tttttgtcta attttcaatc aaattgatat tccacattaa
     8941 catgatagaa ttacctttaa atttatgaaa aaatgcttga aaaacatttg ctttagacac
     9001 ggcattatgt tatatttatt ttcggctata aagccaatac acacatatca aacgtgattg
     9061 tgtaaagggt gcaatatttg tatattgtct ttacaatagt ttgctatgga ggtaattaac
     9121 caataggagg aatttataat ggcagtaatt tcaatgaaac aattactaga agcgggtgtt
     9181 cacttcggtc accaaacacg tcgttggaac ccaaaaatga aaaaatatat cttcactgag
     9241 agaaatggta tttatatcat cgacttacaa aaaacagtga aaaaagtaga cgaggcatac
     9301 aacttcttga aacaagtttc agaagatggt ggacaagtct tattcgtagg aactaaaaaa
     9361 caagcacaag aatcagttaa atctgaagca gaacgtgctg gtcaattcta cattaaccaa
     9421 agatggttag gtggattatt aactaactat aaaacgatct caaaacgaat caaacgtatt
     9481 tctgaaattg aaaaaatgga agaagatggt ttattcgaag tattacctaa aaaagaagta
     9541 gtagaactta aaaaagaata tgaccgttta atcaaattct taggcggaat tcgtgatatg
     9601 aaatcaatgc ctcaagcatt attcgtagtt gacccacgta aagagcgtaa tgcaattgct
     9661 gaagctcgta aattaaatat tcctatcgta ggtatcgttg acactaactg tgatcctgac
     9721 gaaattgact acgttatccc agcaaacgac gatgctatcc gtgcggttaa attattaact
     9781 gctaaaatgg cagatgcaat cttagaaggt caacaaggcg tttctaatga agaagtagct
     9841 gcagaacaaa acatcgattt agatgaaaaa gaaaaatcag aagaaacaga agcaactgaa
     9901 gaataatcaa ctgttgaatc tgacttagat atagtttaaa tgggtgataa gatattaatg
     9961 cttatcacct tttttaaaaa gaaaatcgag gcaaattaca aatattcaat tagagtattg
    10021 gcaatcttgc ctataataat gctaaaatca taatatataa aatgataact tattggagga
    10081 ataatgaatg gcaactattt cagcaaaact tgttaaagaa ttacgtgaaa aaactggcgc
    10141 gggtatgatg gattgtaaaa aagcgctaac tgaaactgat ggtgacatcg ataaagcgat
    10201 tgactaccta cgtgaaaaag gtattgctaa agcagctaaa aaagcagacc gtattgcggc
    10261 tgaaggttta gtacatgtag aaactaaagg taacgacgca gttatcgttg aaatcaactc
    10321 tgaaacagac tttgttgctc gtaacgaagg tttccaagag ttagttaaag aaatcgctaa
    10381 tcaagtatta gatacaaaag ctgaaactgt tgaagcttta atggaaacaa ctttaccaaa
    10441 tggtaaatca gttgatgaaa gaattaaaga agcaatttca acaatcggtg aaaaattaag
    10501 tgttcgtcgt tttgctatca gaactaaaac tgataacgat gctttcggcg cttacttaca
    10561 catgggtgga cgcattggtg tattaacagt tgttgaaggt tcaactgacg aagaagcagc
    10621 aagagacgtt gctatgcata tcgctgcaat caaccctaaa tatgtttctt ctgaacaagt
    10681 tagcgaagaa gaaatcaacc acgaaagaga agttttaaaa caacaagcat taaatgaagg
    10741 taaaccagaa aacatcgttg aaaaaatggt ggaaggacgt ttacgtaaat acttacaaga
    10801 aatttgtgct gtagatcaag acttcgttaa aaaccctgat gtaacagttg aagctttctt
    10861 aaaaacaaaa ggtggaaaac ttgttgactt cgtacgctat gaagtaggcg aaggtatgga
    10921 aaaacgcgaa gaaaactttg cggatgaagt taaaggacaa atgaaataat ctgtcataaa
    10981 gtaaaacaag gaagaagaca cctttaatgt tgctttatta aaatgtaaat cattctaata
    11041 aaacgacaac tgtgtcttct ttacttgtat atgttacata tattcacgat agagaggata
    11101 agaaaatggc tcaaatttct aaatataaac gtgtagtttt gaaactaagt ggtgaagcgt
    11161 tagctggaga aaaaggattt ggcataaatc cagtaattat taaaagtgtt gctgagcaag
    11221 tggctgaagt tgctaaaatg gactgtgaaa tcgcagtaat cgttggtggc ggaaacattt
    11281 ggagaggtaa aacaggtagt gacttaggta tggaccgtgg aactgctgat tacatgggta
    11341 tgcttgcaac tgtaatgaat gccttagcat tacaagatag tttagaacaa ttggattgtg
    11401 atacacgagt attaacatct attgaaatga agcaagtggc tgaaccttat attcgtcgtc
    11461 gtgcaattag acacttagaa aagaaacgtg tagttatttt tgctgcaggt attggaaacc
    11521 catacttctc tacagatact acagcggcat tacgtgctgc agaagttgaa gcagatgtta
    11581 ttttaatggg caaaaataat gtagatggtg tatattctgc agatcctaaa gtaaacaaag
    11641 atgcggtaaa atatgaacat ttaacgcata ttcaaatgct tcaagaaggt ttacaagtaa
    11701 tggattcaac agcatcctca ttctgtatgg ataataacat tccgttaact gttttctcta
    11761 ttatggaaga aggaaatatt aaacgtgctg ttatgggtga aaagataggt acgttaatta
    11821 caaaataaat ttagaggtgt aaaataatga gtgacattat taatgaaact aaatcaagaa
    11881 tgcaaaaatc aatcgaaagc ttatcacgtg aattagctaa tatcagtgca ggaagagcta
    11941 attcaaattt attaaacggc gtaacagttg attactatgg tgcaccaaca cctgtacaac
    12001 aattagcaag catcaatgtt ccagaagcac gtttacttgt tatttctcca tacgacaaaa
    12061 cttctgtagc tgacatcgaa aaagcgataa tagcggctaa cttaggtgtc aacccaacaa
    12121 gtgatggtga agtgatacgt attgcagtac ctgccttaac agaagagcgt agaaaagagc
    12181 gcgttaaaga tgttaagaaa attggtgaag aagctaaagt atctgttcga aatattcgtc
    12241 gtgatatgaa tgatcagttg aaaaaagatg aaaaaaatgg cgacattact gaagatgagt
    12301 tgagaagtgg tactgaagat gttcaggaag caacagacaa ttcaataaaa gaaattgatc
    12361 aaatgattgc tgataaagaa aaagatatta tgtcagtata aaactaatat acaatgacat
    12421 attaaaatgc cagtattaaa cgataatgta acatttaaaa tgggcatgtt taattaaatc
    12481 aaagatgcat gtgataattt aaattcacaa tgagcataaa aatggtgttt aaacaagtta
    12541 attaaacata tactttataa ataataggca ttaggtatat tgctataata aagttatgta
    12601 atttttaacc tcagtatgta tgtcacattt ctggtgtaaa ctgtaccgag tcagactttg
    12661 gtacagtttt tttatttgct tattcaatgc attaaatgag tatgataaaa tgataatgat
    12721 tgtttagtaa cttatactat atgacagaga tgatcaggct cggaggaaag accatgttta
    12781 aaaagctaat aaataaaaag aacactataa ataattataa tgaagaatta gactcgtcta
    12841 atatacctga acatatcgct attattatgg atggtaatgg gcgatgggct aagaagcgaa
    12901 aaatgcctag aattaaaggc cattacgaag gtatgcaaac aataaaaaaa attactagga
    12961 tagctagtga tattggtgtt aagtacttaa ctttatatgc cttttccact gaaaattggt
    13021 caagacctga aagtgaagta aattatatta tgaatttgcc tgtcaatttc ttaaagacat
    13081 tcttaccgga actaattgaa aaaaatgtca aagttgaaac aattggattt actgataagt
    13141 tgccaaaatc aacgatagaa gcaattaata atgctaaaga aaagacagct aataataccg
    13201 gcttaaaatt aatatttgca attaattatg gtggcagagc agaacttgtt catagtatta
    13261 aaaatatgtt tgacgagctt catcaacaag gtttaaatag tgatatcata gatgaaacat
    13321 atataaacaa tcatttaatg acaaaagact atcctgatcc agagttgtta attcgtactt
    13381 caggagaaca aagaataagt aatttcttga tttggcaagt ttcgtatagt gaatttatct
    13441 ttaatcaaaa attatggcct gactttgacg aagatgaatt aattaaatgt ataaaaattt
    13501 atcagtcacg tcaaagacgc tttggcggat tgagtgagga gtagtatagt atgaaagtta
    13561 gaacgctgac agctattatt gccttaatcg tattcttgcc tatcttgtta aaaggcggcc
    13621 ttgtgttaat gatatttgct aatatattag cattgattgc attaaaagaa ttgttgaata
    13681 tgaatatgat taaatttgtt tcagttcctg gtttaattag tgcagttggt cttatcatca
    13741 ttatgttgcc acaacatgca gggccatggg tacaagtaat tcaattaaaa agtttaattg
    13801 caatgagctt tattgtatta agttatactg tcttatctaa aaacagattt agttttatgg
    13861 atgctgcatt ttgcttaatg tctgtggctt atgtaggcat tggttttatg ttcttttatg
    13921 aaacgagatc agaaggatta cattacatat tatatgcctt tttaattgtt tggcttacag
    13981 atacaggggc ttacttgttt ggtaaaatga tgggtaaaca taagctttgg ccagtaataa
    14041 gtccgaataa aacaatcgaa ggattcatag gtggcttgtt ctgtagtttg atagtaccac
    14101 ttgcaatgtt atattttgta gatttcaata tgaatgtatg gatattactt ggagtgacat
    14161 tgattttaag tttatttggt caattaggtg atttagtgga atcaggattt aagcgtcatt
    14221 tcggcgttaa agactcaggt cgtatactac ctggacacgg tggtatttta gaccgatttg
    14281 acagctttat gtttgtgtta ccattattaa atattttatt aatacaagct taatgctgag
    14341 aacaaatcaa taaacgtaaa gaggagttgc tgagataatt taatgaatct cagaactcct
    14401 tttgaaaatt atacgcaata ttaactttga aaattagacg ttatattttg tgatttgtca
    14461 gtatcatatt ataatgactt atgttacgta tacagcaatc aattttaaaa taaaagaaat
    14521 ttataaacaa tcgaggtgta gcgagtgagc tatttagtta caataattgc atttattatt
    14581 gtttttggtg tactagtaac tgttcatgaa tatggccata tgttttttgc gaaaagagca
    14641 ggcattatgt gtccagaatt tgcgatcggt atggggccaa aaatttttag ttttagaaaa
    14701 aatgaaacac tttacactat taggttattg cctgttggtg gatatgttcg tatggcagga
    14761 gatggcttag aagagccacc agtcgagccc ggtatgaacg ttaaaattaa actgaatgaa
    14821 gaaaatgaaa taacacatat catattagat gatcatcata agtttcaaca aattgaagcg
    14881 atcgaagtta aaaaatgtga ttttaaggat gacttattca tagaaggtat cactgcttat
    14941 gataatgaaa gacatcattt taaaattgct agaaagtctt tctttgttga aaatggtagc
    15001 ttagttcaaa ttgctccgag agacagacaa tttgcacata aaaagccatg gccgaaattt
    15061 ttaacattat ttgcgggacc gttatttaac tttatattag ctttagtcct atttattggt
    15121 cttgcatatt atcaaggtac acctacgtct actgtagaac aagtcgcaga taagtatcca
    15181 gcacaacaag caggattaca aaaaggtgat aaaattgttc aaattggcaa atataaaata
    15241 tctgaatttg atgatgttga taaggcgtta gataaagtta aagataataa gacgactgtt
    15301 aaatttgaac gtgatggtaa aacgaagtca gttgaattaa cacctaaaaa gactgaaaga
    15361 aaactgacta aagtaagttc agagacgaag tatgttctcg gattccaacc agcgagtgaa
    15421 catacacttt ttaaaccaat tgtattcgga tttaaaagct ttttaatcgg tagtacttat
    15481 atttttacag ctgtagtagg tatgttggct agtatattta cgggcggatt ctcatttgat
    15541 atgttaaatg gtccggttgg tatttatcat aacgtagact cagttgttaa agcgggtatc
    15601 attagcttaa ttggttacac tgcgttatta agtgtaaact taggtattat gaatttaatt
    15661 cctattcctg cactagacgg tggtcgtatt ttatttgtta tatatgaagc gattttcaga
    15721 aaaccagtta ataaaaaagc ggaaacaacg attattgcta ttggtgccat tttcatggtc
    15781 gttattatga tattagtaac gtggaatgat attcgacgat atttcttata atttaggagg
    15841 ataaataatt atgaagcaat ccaaagtttt tataccaacg atgcgtgacg tgccatcaga
    15901 agcagaagca caaagtcatc gtttattatt gaaatcgggt ttgataaaac aaagtacaag
    15961 tgggatttat agttatttac cgctagcaac acgtgtgtta aataatatta ctgcaattgt
    16021 gcgacaagaa atggaacgta tcgattctgt tgaaatttta atgccagcgt tacaacaagc
    16081 tgaattatgg gaagaatcag gacgttgggg tgcatatggc ccagaattaa tgcgtttaca
    16141 agatagacat ggaagacaat ttgcattagg tccaacacat gaagaattag ttacatcaat
    16201 agtaagaaat gaattgaaat catacaaaca attaccgatg acattattcc aaattcaatc
    16261 taaattccgt gatgaaaaga gaccacgttt tggtttactt cgtggtcgtg aatttattat
    16321 gaaagatgcg tattcattcc atgctgacga ggcatcatta gatcaaacgt atcaagatat
    16381 gtatcaagcg tatagccgta tttttgagag agttggcatt aacgcaagac cagtagttgc
    16441 agattcaggt gctattggcg gtagccatac acatgaattt atggcattaa gtgctatcgg
    16501 tgaggataca atcgtttaca gtaaagaaag cgattatgct gctaacatcg aaaaagcaga
    16561 agtcgtttac gaaccaaatc ataagcatac tactgtgcaa cctatagaaa aaattgaaac
    16621 accaaatgtt aagactgcgc aagaattggc agacttttta ggtagaccag tagatgaaat
    16681 cgttaaaacg atgattttca aagttgatgg cgaatatatt atggttttag tgcgtggaca
    16741 tcatgaaatt aatgacatta aattaaaatc ttatttcggc acagataata ttgaattagc
    16801 aacacaagac gaaattgtta atttagttgg tgcaaatcct ggttcactag gtcctgtaat
    16861 tgataaagaa atcaaaattt atgcagataa ttttgtgcaa gatttaaata atttagttgt
    16921 cggtgctaac gaagatggtt atcacttaat taatgtaaat gtaggtagag acttcaacgt
    16981 tgatgcatat ggcgatttcc gttttatttt agaaggcgaa aagttaagtg atggttcagg
    17041 cgttgcacat tttgctgaag gtattgaagt tggtcaagta tttaaattgg gtactaagta
    17101 ttcagaatca atgaatgcta cattcttaga taatcaagga aaagctcaac cgttaattat
    17161 gggttgttat ggtattggaa tttctagaac gctaagtgca attgttgaac aaaatcacga
    17221 tgataatggt attgtttggc ctaaatcagt tactccattt gatttacatt taatttctat
    17281 taatcctaag aaagatgatc aacgagaact agcggatgca ctatatgctg aatttaatac
    17341 taaatttgat gtgttgtacg atgatcgtca ggaacgtgcg ggtgtcaaat ttaatgatgc
    17401 cgatttaatt ggtttaccac tgcgaattgt tgttggtaaa cgtgcatcgg aaggtattgt
    17461 agaagttaaa gaacgtttaa caggtgatag cgaagaagtc cacattgatg acttaatcac
    17521 tgtcattaca aataaatatg ataacttaaa ataattaaga tcgaatgaat tataagagta
    17581 ggaaaaagct gaaagaaatc agatgcttat gtcctgctct tattattttt gatataatga
    17641 ttattcgatg aaaaatgact gaagacatag tataattaaa gataaatttg ttttaacaat
    17701 attatgatta gccaaatata aagcatttaa ttttctatca ttactatgct cacataatct
    17761 aaatattgtt cgaacacgta aaagtaattt ctatttaagg tggtaattgt cttggcaatg
    17821 acagagcaac aaaaatttaa agtgcttgct gatcaaatta aaatttcaaa tcaattagat
    17881 gctgaaattt taaattcagg tgaactgaca cgtatagatg tttctaacaa aaacagaaca
    17941 tgggaatttc atattacatt accacaattc ttagctcatg aagattattt attatttata
    18001 aatgcaatag agcaagagtt taaagatatc gccaacgtta catgtcgttt tacggtaaca
    18061 aatggcacga atcaagatga acatgtaatt aaatactttg gacactgtat tgaccaaaca
    18121 gctttatctc caaaagttaa aggtcaattg aaacagaaaa agcttattat gtctggaaaa
    18181 gtattaaaag taatggtatc aaatgacatt gaacgtaatc attttgataa ggcatgcaat
    18241 ggaagtctta tcaaagcgtt tagaaattgt ggttttgata tcgataaaat catattcgaa
    18301 acaaatgata atgatcaaga acaaaactta gcttctttag aagcacatat acaagaagaa
    18361 gacgaacaaa gtgcacgatt ggcaacagag aaacttgaaa aaatgaaagc tgaaaaagcg
    18421 aaacaacaag ataacaacga aagtgctgtc gataagtgtc aaattggtaa gccgattcaa
    18481 attgaaaata ttaaaccaat tgaatctatt attgaggaag agtataaagt tgcaatagag
    18541 ggtgtcattt ttgatattaa cttaaaagaa cttaaaagtg gtcgtcatat cgtagaaatt
    18601 aaagtgactg actatacgga ctctttagtt ttaaaaatgt ttactcgtaa aaacaaagat
    18661 gatttagaac attttaaagc gctaagtgtt ggtaaatggg ttagggctca aggtcgtatt
    18721 gaagaagata catttattag agatttagtt atgatgatgt ctgatattga agagattaaa
    18781 aaagcgacaa aaaaagataa ggctgaagaa aagcgtgtag aattccactt gcatactgca
    18841 atgagtcaaa tggatggtat accaaatatt agtgcgtatg ttaaacaggc agcagactgg
    18901 ggacatccag ccattgcggt tacagaccat aatgttgtgc aagcatttcc agatgctcac
    18961 gcagcagcgg aaaaacatgg tattaaaatg atatacggta tggaaggtat gttagttgat
    19021 gatggtgttc cgattgcata caaaccacaa gatgtcgtat taaaagatgc tacttatgtt
    19081 gtattcgacg ttgagacaac tggtttatca aatcagtatg ataaaatcat cgagcttgca
    19141 gctgtgaaag ttcataacgg cgaaatcatc gataagtttg aaaggtttag taatccgcat
    19201 gaacgattat cggaaacgat tatcaatttg acgcatatta ctgatgatat gttagtagat
    19261 gcccctgaga ttgaagaagt acttacagaa tttaaagaat gggttggcga tgcgatattc
    19321 gtagcacata atgcttcgtt tgatatgggc ttcatcgaca cgggatatga acgtcttgga
    19381 tttggaccat ctacgaatgg tgttatcgat acattagaat tatctcgtac gattaatact
    19441 gaatatggta aacatggttt aaatttctta gctaaaaaat acggtgtaga attaacgcaa
    19501 catcaccgtg ccatttatga tacagaggca acagcttaca ttttcataaa aatggttcaa
    19561 caaatgaaag aattaggcgt attaaatcat aacgaaatca acaaaaaact cagtaatgaa
    19621 gatgcatata aacgtgcaag acctagtcat gtcacattaa ttgtacaaaa ccaacaaggt
    19681 cttaaaaatc tatttaaaat tgtaagtgca tcattagtga agtatttcta ccgtacgcct
    19741 cgaattccac gttcattgtt agatgaatat cgtgagggat tattggtagg tacagcgtgt
    19801 gatgaaggtg aattatttac ggcagttatg cagaaggacc agagccaagt tgaaaaaatt
    19861 gccaaatatt atgattttat tgaaattcaa ccaccggcac tttatcaaga tttaattgat
    19921 agagagctta ttagagatac tgaaacatta catgaaattt atcaacgttt aatacatgca
    19981 ggtgacacag cgggtattcc tgttattgcg acaggaaatg cacactattt gtttgaacat
    20041 gatggtatcg cacgtaaaat tttaatagca tcacaacccg gcaatccact taatcgctca
    20101 actttaccgg aagcacattt tagaactaca gatgaaatgt taaacgagtt tcatttttta
    20161 ggtgaagaaa aagcgcatga aattgttgtg aaaaatacaa acgaattagc agatcgaatt
    20221 gaacgtgttg ttcctattaa agatgaatta tacacaccgc gtatggaagg tgctaacgaa
    20281 gaaattagag aactaagtta tgcaaatgcg cgtaaattgt atggtgaaga cctgcctcaa
    20341 atcgtaattg atcgattaga aaaagaatta aaaagtatta tcggtaatgg atttgcggta
    20401 atttacttaa tttcgcaacg tttagttaaa aaatcattag atgatggata cttagttggt
    20461 tcccgtggtt cagtaggttc tagttttgta gcgacaatga ctgagattac tgaagtaaac
    20521 ccgttaccgc cacactatat ttgtccgaac tgtaaaagga gtgaattttt caatgatggt
    20581 tcagtaggat caggattcga tttacctgat aagacgtgtg aaacttgtgg agcgccactt
    20641 attaaagaag gacaagatat tccgtttgaa acatttttag gatttaaagg agataaagtt
    20701 cctgatatcg acttaaactt tagtggtgaa tatcaaccga atgcccataa ctacacaaaa
    20761 gtattatttg gtgaggataa agtattccgt gcaggtacaa ttggtaccgt tgctgaaaag
    20821 actgcttttg gttatgttaa aggttatttg aatgatcaag gcatccacaa aagaggcgct
    20881 gaaatagatc gactcgttaa aggatgtaca ggtgttaaac gtacaaccgg acagcatcca
    20941 gggggtatta ttgtagtacc tgattacatg gatatttatg attttacgcc gatacaatat
    21001 cctgccgatg atcaaaattc agcatggatg acgacacatt ttgatttcca ttctattcat
    21061 gataatgtat taaaacttga tatacttgga catgatgatc caacaatgat tcgtatgctt
    21121 caagatttat caggaattga tccaaaaaca atacctgtag atgataaaga agttatgcag
    21181 atttttagta cacctgaaag tttgggtgtt actgaaaatg aaattttatg taaaacaggt
    21241 acatttggag taccagaatt cggtacagga ttcgtgcgtc aaatgttaga agatacaaag
    21301 ccaacaacat tttctgaatt agttcaaatc tcaggattat ctcatgggac agatgtgtgg
    21361 ttaggcaatg ctcaagaatt aattaaaacc ggtatatgtg atttatcaag tgtaattggt
    21421 tgtcgtgatg atatcatggt ttatttaatg tatgctggtt tagaaccatc aatggctttt
    21481 aaaataatgg agtcagtacg taaaggtaaa ggtttaactg aagaaatgat tgaaacgatg
    21541 aaagaaaatg aagtgccgga ttggtattta gattcatgtc ttaaaattaa gtacatgttc
    21601 cctaaagccc atgcagcagc atacgtttta atggcagtac gtatcgcata tttcaaagta
    21661 catcatccac tttattacta tgcatcttac tttacaattc gtgcgtcaga ctttgattta
    21721 ataacgatga ttaaagataa aacaagcatt cgaaatactg taaaagacat gtattctcgc
    21781 tatatggatc taggtaaaaa agaaaaagac gtattaactg tcttggaaat tatgaatgaa
    21841 atggcgcatc gaggttatcg aatgcaaccg attagtttag aaaagagtca ggcgttcgaa
    21901 tttatcattg aaggcgatac acttattccg ccgttcatat cagtgcctgg gcttggcgaa
    21961 aacgttgcga aacgaattgt tgaagctcgt gacgatggac catttttatc aaaagaagat
    22021 ttaaacaaaa aagctggatt atctcagaaa attattgagt atttagatga gttaggctca
    22081 ttaccgaatt taccagataa agctcaactt tcgatattcg atatgtaaaa tgaaataatt
    22141 aagctattta tttaatgcgt atggcatagt cgaagaaata caaaattgtt gctggacaca
    22201 aagttatgcc tgtatttttt tagcgtctta cgagtctatt cgaatgtaat ggtgaaataa
    22261 atgaacaaac ttttacaaga atctctgatt aatagtgaag tcatttgttt caagcataaa
    22321 cttatgctat aattaagttg cttaaaaatt agtgaactca ggcagaagag tgggagattc
    22381 ccgctctttt ctatttgcca aaaagggagg cctgtatgag taaaattaca gaacaagtag
    22441 aagtgatcgt tcaaccaata atggaagact tgaattttga acttgtagac gttgaatatg
    22501 tcaaagaggg tagagatcat tttcttagaa tctctattga taaagaaggt ggcgtagatt
    22561 taaatgattg tacgctagct tctgaaaaaa taagtgaagc tatggatgca aatgatccta
    22621 ttcctgaaat gtattattta gacgtagcgt cacctggtgc agaacgtcca attaaaaaag
    22681 aacaagattt ccaaaatgca ataactaaac ctgtatttgt ttctttatat gtaccaattg
    22741 aaggtgaaaa ggaatggtta ggcattttac aagaagtcaa taatgaaaca attgtagtac
    22801 aagttaaaat caaagcaaga acgaaagata tagagatacc gagagacaaa atagcaaaag
    22861 cacgtcacgc agttatgatt taacgtgatg aggaggaaaa aacgtgtcaa gtaatgaatt
    22921 attattagct actgagtatt tagaaaaaga aaagaagatt cctagagcag tattaattga
    22981 tgctattgaa gcagctttaa ttactgcata caaaaagaat tatgatagtg caagaaatgt
    23041 ccgtgtggaa ttaaatatgg atcaaggtac tttcaaagtt atcgctcgta aagatgttgt
    23101 tgaagaagta tttgacgaca gagatgaagt ggatttaagt acagcgcttg ttaaaaaccc
    23161 tgcatatgaa attggtgata tatacgaaga agatgtaaca cctaaagatt ttggtcgtgt
    23221 aggtgctcaa gcagcgaaac aagcagtaat gcaacgtctt cgtgatgctg aacgtgaaat
    23281 tttatttgaa gaatttatag acaaagaaga agacatactt actggaatta ttgaccgtgt
    23341 tgaccatcgt tatgtatatg tgaatttagg tcgtatcgaa gctgttttat ctgaagcaga
    23401 aagaagtcct aacgaaaaat atattcctaa cgaacgtatc aaagtatatg ttaacaaagt
    23461 ggaacaaacg acaaaaggtc ctcaaatcta tgtttctcgt agccatccag gtttattaaa
    23521 acgtttattt gaacaagaag ttccagaaat ttacgatggt actgtaattg ttaaatcagt
    23581 agcacgtgaa gctggcgatc gctctaaaat tagtgtcttc tctgaaaaca atgatataga
    23641 tgctgttggt gcatgtgttg gtgccaaagg cgcgcgtgtt gaagctgttg ttgaagagct
    23701 aggtggcgaa aaaatcgaca tcgttcaatg gaatgaagat ccaaaagtat ttgtaaaaaa
    23761 tgctttaagc ccttctcaag ttttagaagt tattgttgat gaaacaaatc aatctacggt
    23821 agttgttgtt ccagattatc aattgtcatt agcgattggt aaaagaggac aaaacgcacg
    23881 tctagctgct aaattaaccg gctggaaaat tgatattaaa tcagaaacag atgcgcgtga
    23941 agcgggtatc tatccagtag ttgaagctga aaaagtaact gaagaagata ttgctttaga
    24001 agatgctgac acaacagaat caaccgaaga ggtaaatgat gtttcagttg aaacaaatgt
    24061 agagaaagaa tctgaataat aggttggagt gaagtatcta tgaaaaagaa aaaaattccg
    24121 atgcgaaaat gtattctttc aaatgaaatg catcccaaaa aagatatgat tcgtgttgtt
    24181 gttaataaag aaggcgaaat ctttgcggat gttactggaa agaaacaagg ccgtggcgca
    24241 tatgtttcta aagatgttgc tatggttgaa aaagcacaac aaaaagaaat tttagaaaaa
    24301 tattttaaag catctaaaga gcaattggat cctgtttaca aagaaattat tagattaatt
    24361 tatagagaag aaatcccaaa atgagtatag atcaaatatt aaacttttta ggattagcaa
    24421 tgagagctgg taaagtaaaa acaggtgaat cagtcattgt taatgagatt aaaaaaggaa
    24481 atttgaagct cgttattgtt gcaaatgatg cgtctgataa tacagctaaa ttaattacag
    24541 ataaatgtaa gagttacaaa gttccattca gaaagtttgg aaatcgaaat gaattgggaa
    24601 tagcacttgg aaaaggtgag cgtgttaatg tagggattac tgacccaggc tttgctaaaa
    24661 agttgctatc aatgatagat gaatatcata aggagtgatt atatgagtaa acaaagaatt
    24721 tacgaatatg cgaaagaatt aaatctaaag agtaaagaga ttatagatga gttaaaaagc
    24781 atgaatattg aggtttcaaa tcatatgcaa gctttggaag atgaccaaat taaagcatta
    24841 gataaaaagt tcaaaaaaga acaaaagaac gacaataaac aaagcactca aaataatcac
    24901 caaaaatcaa acaatcaaaa ccaaaataaa gggcaacaaa aagataacaa aaagaatcaa
    24961 caacaaaata ataaaggcaa caaaggcaat aaaaagaata atagaaataa taagaaaaat
    25021 aacaagaata ataaaccaca aaatcaacca gctgctccaa aagaaatacc atcaaaagtg
    25081 acatatcaag aaggtattac agtaggcgaa tttgcggata aattaaatgt tgaatcatcc
    25141 gaaattatca aaaaattatt cttacttggt attgttgcta atatcaatca atcattaaat
    25201 caagaaacaa tcgaattaat tgccgatgat tatggcgttg aggttgaaga agaagttgtg
    25261 attaatgaag aagatttatc aatctacttt gaagacgaaa aagatgatcc agaagcaatt
    25321 gagagaccag cagttgtaac aattatggga catgttgacc atggtaaaac gactttatta
    25381 gattcaattc gtcatacaaa agttacagca ggtgaagcag gcggaatcac tcaacatatt
    25441 ggtgcatatc aaattgaaaa cgatggcaaa aaaatcactt tcttagatac accgggacat
    25501 gctgcattta caacgatgcg tgcgcgtggt gcacaagtaa cagatattac aattttagta
    25561 gttgcagctg acgatggtgt tatgccacaa acaattgaag caattaacca tgctaaagaa
    25621 gcagaagtac caattattgt tgcagtaaat aaaattgata aaccaacttc aaatcctgat
    25681 cgagttatgc aagaattaac tgaatatggt ttaattcctg aagattgggg cggcgaaaca
    25741 attttcgttc cactttctgc attaagtggt gatggtatcg acgatttatt agaaatgata
    25801 ggattagttg cagaagttca agaacttaaa gcaaatccta aaaaccgtgc tgttggtaca
    25861 gttatcgaag ctgaattaga taaatcacgt ggtccttctg catcattatt agtacaaaat
    25921 ggtacattaa atgttggtga tgcgattgta gttggtaata cttacggccg tatccgtgca
    25981 atggttaatg acttaggtca aagaatcaaa acggctggtc catcaacgcc tgttgaaatt
    26041 acaggtatta atgatgtgcc acaagctggg gatcgctttg ttgtatttag tgatgaaaaa
    26101 caagctcgtc gtattggtga atcaagacac gaagctagca ttgtacaaca acgtcaagaa
    26161 agtaaaaatg tttcattaga taacctgttt gaacaaatga aacaaggtga aatgaaagat
    26221 ttaaacgtta ttattaaagg tgatgttcaa ggttctgttg aagctttagc tgcatcatta
    26281 atgaaaattg atgttgaagg cgtaaatgtt cgtatcattc atacagcggt tggtgcaatt
    26341 aatgagtcag acgtgacact tgctaatgcc tcaaatggta ttatcattgg tttcaatgtt
    26401 cgtccagaca gtggtgcaaa acgtgctgca gaagctgaaa atgttgatat gcgtttacac
    26461 agagttattt ataatgttat cgaagaaatt gaatcagcga tgaaaggttt acttgatcca
    26521 gaatttgaag aacaagttat cggacaagct gaagttcgtc aaacattcaa agtttctaaa
    26581 gttggtacta ttgctggatg ttatgttact gaaggtaaaa ttacgcgaaa tgctggtgta
    26641 cgtattattc gtgatggtat tgttcaatat gaaggcgaat tagatacact taaacgtttc
    26701 aaagatgatg ctaaggaagt tgcaaaaggt tatgaatgtg gtattacaat tgaaaactac
    26761 aatgacctta aagaaggcga tgttatcgaa gcatttgaaa tggttgaaat taagcgttaa
    26821 ttaaataaat tacaagctaa aagtatagtt aagattgata tgctccctat aaatattgca
    26881 ctttttaagt gtctacttta tagggagcat atttgatact agcttttggt tttttattag
    26941 aatagattac ctattaaaag ttacgttata tggacatgat tttgtataaa attttgtggt
    27001 ggcctagaat gatttttaat gacaaaatat aatgtcgact attattggaa aattttctgt
    27061 tgaaatgcct atcttacggc aaactttatt tgattttata ggcttaattt attaaaataa
    27121 cgtgtgagct aaaataattg tttaagcatt gttacactaa aaaatgcaaa taacaattga
    27181 acttaaagat aaagaggtga caagaatgag cagtatgaga gcagagcgtg ttggtgaaca
    27241 aatgaagaag gaattaatgg atatcatcaa caataaagtc aaagatcctc gagttggttt
    27301 tattacaatt acagatgttg ttttaacaaa tgatttatcg caggctaaag tatttttaac
    27361 tgtattaggt aacgataaag aagtagaaaa tacatttaaa gcacttgata aagcaaaagg
    27421 cttcattaag tctgaattag gttctagaat gcgattacgt attatgccgg aattaatgta
    27481 tgaatatgat caatcaatcg aatatggtaa taaaattgaa cgaatgattc aagatttaca
    27541 caaacaagat agataattta gtgttaggta tctggaaaat gtttgataat ttcttaatat
    27601 cggtatatta acattaaaca gttaatacat agatgtgtag aaatagttaa cattttccag
    27661 tttttttatg aataaattca gttgaaacgc tattaaaata tattttaaaa aagaaggtga
    27721 ctatatgtat aatgggatat taccagtata taaagagcgc ggtttaacaa gtcatgacgt
    27781 tgtattcaaa ttgcgtaaaa tattaaaaac taaaaaaata ggtcacacgg gtacgcttga
    27841 tcccgaagtt gcaggcgtgt taccggtatg tataggtaat gcaacgagag ttagtgatta
    27901 tgttatggat atgggcaaag cttatgaagc aactgtatcg ataggaagaa gtacaacgac
    27961 tgaagatcaa acgggtgata cattggaaac aaaaggtgta cactcagcag attttaataa
    28021 ggacgatatt gaccgattgt tagaaagttt taaaggtatc attgaacaaa ttccgccgat
    28081 gtactcatcc gtcaaagtaa atggtagaaa attatatgaa tatgcgcgta ataatgaaac
    28141 agttgaaaga ccaaagcgta aagttaatat taaagacatt gggcgtatat ctgaattaga
    28201 ttttaaagaa aatgagtgtc attttaaaat acgcgtcatc tgtggtaaag gtacatatat
    28261 tagaacgcta gcaactgata ttggtgtgaa attaggcttt ccggcacata tgtcgaaatt
    28321 aacacgaatc gagtctggtg gatttgtgtt gaaagatagc cttacattag aacaaataaa
    28381 agaacttcat gagcaggatt cattgcaaaa taaattgttt cctttagaat atggattaaa
    28441 gggtttgcca agcattaaaa ttaaagattc gcacataaaa aaacgtattt taaatgggca
    28501 gaaatttaat aaaaatgaat ttgataacaa aattaaagac caaattgtat ttattgatga
    28561 tgattcagaa aaagtattag caatttatat ggtacaccct acaaaagaat cagaaattaa
    28621 acctaaaaaa gtctttaatt aaaggagata gaatttatga aagtcataga agtgacacat
    28681 cctatacaat ctaaacagta tattacagag gatgttgcaa tggcattcgg atttttcgat
    28741 ggcatgcata aaggtcatga caaagtcttt gatatattaa acgaaatagc tgaggcacgc
    28801 agtttaaaaa aagcggtgat gacatttgat ccgcatccat ctgtcgtgtt gaatcctaaa
    28861 agaaaacgaa caacgtattt aacgccactt tcagataaaa tcgaaaaaat tagccaacat
    28921 gatattgatt attgtatagt ggttaatttt tcatctaggt ttgctaatgt gagcgttgaa
    28981 gattttgttg aaaattatat aattaaaaat aatgtaaaag aagtcattgc tggttttgat
    29041 tttacttttg gtaaatttgg aaaaggtaat atgactgttc ttcaagaata tgatgcgttt
    29101 aatacgacaa ttgtgagtaa acaagaaatt gaaaatgaaa aaatttctac aacttctatt
    29161 cgtcaagatt taatcaatgg tgagttgcaa aaagcgaatg atgctttagg ctatatatat
    29221 tctattaaag gcactgtagt gcaaggtgaa aaaaggggaa gaactattgg cttcccaaca
    29281 gctaacattc aacctagtga tgattatttg ttgcctcgta aaggtgttta tgctgttagt
    29341 attgaaatcg gcactgaaaa taaattatat cgaggggtag ctaacatagg tgtaaagcca
    29401 acatttcatg atcctaacaa agcagaagtt gtcatcgaag tgaatatctt tgactttgag
    29461 gataatattt atggtgaacg agtgaccgtg aattggcatc atttcttacg tcctgagatt
    29521 aaatttgatg gtatcgaccc attagttaaa caaatgaatg atgataaatc gcgtgctaaa
    29581 tatttattag cagttgattt tggtgatgaa gtagcttata atatctagag ttgcgtatag
    29641 ttatataaac aatctatacc acaccttttt cttagtaggt cgaatctcca acgcctaact
    29701 cggattaagg agtattcaaa cattttaagg aggaaattga ttatggcaat ttcacaagaa
    29761 cgtaaaaacg aaatcattaa agaataccgt gtacacgaaa ctgatactgg ttcaccagaa
    29821 gtacaaatcg ctgtacttac tgcagaaatc aacgcagtaa acgaacactt acgtacacac
    29881 aaaaaagacc accattcacg tcgtggatta ttaaaaatgg taggtcgtcg tagacattta
    29941 ttaaactact tacgtagtaa agatattcaa cgttaccgtg aattaattaa atcacttggt
    30001 atccgtcgtt aatcttaata taacgtcttt gaggttgggg catatttatg ttccaacctt
    30061 aatttatatt aaaaaagctt tttacaaata ttaacattta ttatatgtta agctaatatt
    30121 gagtgaataa taaggttaca atgagataaa gatgatataa gtacacctag agtaataatc
    30181 aagatattaa aaataaagta tgttttttta aaaaatataa cttatattta tactgataag
    30241 ggtgggacga taagtctatt ttgtaaataa tagatggata tcccgctctc tttttttcca
    30301 attcaatatt ttataactaa tattaaaata cgataataaa tgatatgata taactattag
    30361 attcaagaga ggagatttat aatgtctcaa gaaaagaaag tttttaaaac tgaatgggca
    30421 ggaagatctt taacgattga aacagggcaa ttagctaaac aagcaaatgg cgctgtattg
    30481 gttcgttatg gagatacagt cgtgttatcg acggcaactg catcaaaaga acctcgtgat
    30541 ggagatttct tcccattaac agtgaactat gaagaaaaaa tgtacgctgc gggtaaaatt
    30601 cctggtggat ttaaaaagag agaaggacgt cctggtgacg atgcaacatt aactgcgcga
    30661 ttaattgata gaccaattag acctttattc cctaaaggat ataagcatga tgttcaaatt
    30721 atgaacatgg tattaagtgc agatcctgat tgttcaccac aaatggctgc aatgattggt
    30781 tcatctatgg cgcttagtgt gtcggatatt ccattccaag ggccaatcgc cggtgtaaat
    30841 gtgggttata ttgacggtaa atatatcatt aacccaacag tagaagaaaa agaagtttct
    30901 cgtttagacc ttgaagtagc tggtcataaa gatgcagtaa acatggtaga ggcaggcgct
    30961 agtgagatta ctgaacaaga aatgttagag gcgattttct ttggtcatga agagattcaa
    31021 cgtttagttg agttccaaca acaaatcgtc gaccacattc aacctgttaa acaagaattt
    31081 attccagcag agcgtgatga agcgctagtt gaacgtgtaa aatctttaac cgaagaaaaa
    31141 ggacttaaag aaacagtttt aacatttgat aaacaacaac gagatgaaaa tcttgataac
    31201 ttaaaagaag aaatcgtcaa tgaatttatc gatgaagaag atccagagaa tgaattactt
    31261 attaaagaag tttatgcaat tttaaatgaa ttagtgaaag aagaagttcg acgtttaatt
    31321 gcagatgaaa aaattagacc agacggccgt aaacctgatg aaatccgtcc attagattct
    31381 gaagttggta ttttacctag aacgcatggt tcaggtctat ttacacgtgg tcagactcaa
    31441 gcactttcag ttttaacatt aggtgcttta ggcgattatc aattaattga tggtttagga
    31501 cctgaagaag aaaaaagatt catgcatcat tataacttcc cgaatttttc agtaggtgaa
    31561 actggtccag tacgtgcgcc aggtcgtcgt gaaattggac atggtgcgtt aggtgaaaga
    31621 gcattaaaat atattattcc tgatactgct gatttcccat atacaattcg tattgtaagt
    31681 gaggtacttg aatcaaacgg ttcatcatct caagcgtcaa tttgtggatc aacattagca
    31741 ttaatggatg cgggcgtacc gattaaagca ccagttgctg gtattgctat gggccttgtt
    31801 acacgtgaag atagctatac gattttaact gatatccaag gtatggaaga tgcattaggt
    31861 gatatggact ttaaagtcgc tggtactaaa gaaggtatta cagcaatcca aatggatatt
    31921 aaaattgatg gtttaacgcg tgaaattatc gaagaggctc tagaacaagc gagacgtggt
    31981 cgtttagaaa taatgaatca tatgttacaa acaattgatc aaccacgtac tgaattaagt
    32041 gcttacgcgc caaaagttgt aactatgaca attaaaccag ataagattag agatgttatc
    32101 ggacctggtg gtaaaaaaat taacgaaatt attgatgaaa caggcgttaa attagatatt
    32161 gaacaagatg gtactatctt tattggggcc gttgatcaag ctatgataaa tcgtgctcgt
    32221 gaaatcattg aggaaattac acgtgaagcg gaagtaggtc aaacttatca agccactgtt
    32281 aaacgtattg aaaaatacgg tgcgtttgta ggcctattcc cgggtaaaga tgcgttgctt
    32341 cacatttcac aaatttcaaa aaatagaatt gaaaaagtgg aagatgtatt aaaaatcggt
    32401 gacacaattg aagttaagat tactgaaatt gataaacaag gtcgagtaaa tgcttcacac
    32461 agagcattag aagaataata tttaaagtca tatgacgaca atgtatcgtc atgtgatttt
    32521 tttatgcaat tttttacgaa gtgatccatt ttgaatttgt tgtattgaac attttaaaac
    32581 gctttattat tttgtgtgta actgttaatt atcctgtatg tatagtgatt aatagtgtac
    32641 atcaagtgtt ttttaactta taatgaatag tgagtttata tatggacggg taacaaattt
    32701 aggaggtaag attttgagtt taataaagaa aaagaataaa gatattcgca ttataccatt
    32761 aggcggtgtt ggcgaaattg ctaaaaatat gtatatcgtt gaagtagacg atgaaatgtt
    32821 tatgttagat gctggactta tgtttccaga agacgaaatg ctaggtattg atattgttat
    32881 accagacatt tcatacgtac ttgaaaataa agataaattg aagggtatat tccttacaca
    32941 cggacatgag cacgcgattg gtgcagtgag ttatgtttta gaacaattag atgcaccagt
    33001 atatggatct aaattgacaa tagcgttaat taaagaaaat atgaaagccc gtaatattga
    33061 taaaaaagtt cgctactaca cagttaataa tgattcaatt atgagattca aaaacgtgaa
    33121 tattagtttc tttaatacga cacacagtat tcctgatagt ttaggtgttt gtattcatac
    33181 ttcatatggt gccattgtgt atacaggtga atttaagttt gaccaaagtt tacatggaca
    33241 ttatgcacca gatattaaac gtatggcaga gattggtgaa gaaggcgtat ttgtcttaat
    33301 cagtgattct actgaggcag agaaacctgg atataatact ccggaaaatg tgattgaaca
    33361 tcatatgtat gacgcttttg caaaagtgcg aggtcgcttg attgtttcat gttatgcttc
    33421 gaactttata cgtatacagc aagttttaaa tattgctagc aagctaaatc gtaaagtgtc
    33481 atttttagga agatcacttg aaagttcatt taatattgct cgtaaaatgg ggtatttcga
    33541 cattcctaaa gatttgctaa ttcctataac agaagttgat aattatccta aaaatgaagt
    33601 gataattata gctactggta tgcaaggaga acctgtagaa gccttaagtc aaatggcgca
    33661 acataagcat aaaattatga atatcgaaga aggcgattct gtatttttag caattacggc
    33721 ttctgctaat atggaagtta tcattgcgaa tacattaaat gagcttgtac gtgctggcgc
    33781 acatattatt ccaaataaca agaagattca tgcttcaagt catggttgca tggaagaatt
    33841 aaaaatgatg attaatatta tgaaacctga atactttatt cctgtacaag gtgaatttaa
    33901 aatgcagata gcacatgcga agctagcagc tgaagcaggt gttgcaccag aaaagatttt
    33961 ccttgtggaa aaaggagatg tcattaatta caacggtaaa gatatgatat taaatgaaaa
    34021 ggtaaattca ggaaatattt taatagatgg tattggtatt ggggatgtag gaaatatcgt
    34081 gttgagagac cgtcatcttt tagcagaaga tggtatcttt attgctgtag taacgttaga
    34141 tcctaaaaat agacgtatag ctgcgggacc tgaaattcaa tctcgtgggt ttgtatatgt
    34201 acgtgaaagt gaagacttat tacgtgaagc agaagagaaa gtacgtgaaa tagtagaggc
    34261 tggtttacaa gaaaaacgca tagaatggtc tgaaattaag caaaatatgc gtgatcaaat
    34321 tagtaaacta ttattcgaaa gtacaaaacg tcgtcctatg attattccag taatttctga
    34381 aatttaatca aaaagtcatt aacataaaag aggtcagaac aagtcactga aatataatgg
    34441 ttgtcatgga caatttactt atattttatg atggtcaatt gaaaggggta acgattaatc
    34501 tgttatctta agtaaattga tacatagatg atattgttct aacctctttc atcgtctgtt
    34561 tggactacat attctaaaca tcaaatagga aattatatat aataacgtcg ttttaactaa
    34621 ggcaacataa ggaggtgcgt caattggcac aagcaaaaaa gaaatcgaca gctaagaaaa
    34681 aaacaacatc aaaaaaaaga acaaattcga ggaaaaagaa gaatgataat ccgatacgtt
    34741 atgtcatagc tattttagta gttgtattaa tggtgttggg tgttttccaa ttaggaataa
    34801 taggtcgtct aattgacagc ttctttaatt atttatttgg gtacagtaga tatttaacat
    34861 atattttagt actcttagca actggtttta ttacatactc taaacgtatt cctaaaacta
    34921 gacgaacggc tggttcgatt gtattgcaaa ttgcattgct atttgtatca cagttagttt
    34981 ttcattttaa tagtggtatc aaagctgaaa gagaacctgt actttcttat gtgtatcagt
    35041 cataccaaca cagtcatttc ccaaattttg gtggcggtgt attaggcttt tatttattag
    35101 agttaagcgt acctttaatt tcattatttg gtgtatgtat tattactatt ttattattat
    35161 gctcaagtgt tattttatta acaaaccatc aacatcgtga agtagcaaaa gttgtactgg
    35221 aaaatataaa agcttggttt ggttcattta atgaaaaaat gtcggaaaaa aaccaagaaa
    35281 aacaattgaa gcgtgaagaa aaagcgagac ttaaagaaga acaaaaggca cgtcaaaatg
    35341 aacagccaca aataaaagat gtgagtgatt ttacggaagt gcctcaagaa agagatattc
    35401 caatttatgg gcatactgaa aatgaaagta aaagtcagag tcaaccaagt cggaaaaagc
    35461 gagtgttcga tgcagagaat agttcgaata acatcgtaaa tcatcatcaa gcagatcagc
    35521 aagaacaatt aacagaacaa actcataaca gtgttgaaag tgaaaacact attgaagaag
    35581 ctggtgaagt tacgaatgta tcgtatgttg ttccaccgtt aactttactt aatcaacctg
    35641 caaaacaaaa agcaacatct aaagctgaag tgcaacgtaa aggacaagta ctagagaata
    35701 cattaaaaga ttttggggta aatgcaaaag tgacacaaat taaaattggt cctgcagtaa
    35761 ctcaatatga aattcaacca gctcaagggg ttaaagtgag taaaattgta aacctgcaca
    35821 atgatatcgc attagcttta gcagcaaaag atgttagaat cgaagcgcca atacctggtc
    35881 gctctgcagt aggtattgaa gtgccaaatg agaaaatttc attagtttca ctaaaagaag
    35941 ttttagatga aaaattcccg tctaataata aactagaagt tggattagga agagatatat
    36001 caggtgatcc aattactgtt ccactaaatg aaatgccaca cttattggtg gcaggatcga
    36061 cgggtagtgg taaatctgtt tgtataaatg gtattattac aagtatttta ttaaatgcta
    36121 aaccgcatga agttaaactt atgttaatcg atccgaaaat ggttgaacta aatgtttata
    36181 acggaattcc acatttatta attccggttg ttacaaatcc tcataaagct gctcaagctt
    36241 tagaaaaaat tgtagctgag atggaaagac gttatgattt attccaacat tcatcaacta
    36301 gaaatattaa aggttataac gaattaatcc gtaagcaaaa tcaagaatta gatgagaagc
    36361 aaccagaatt accttatatc gttgttattg tagatgagct tgcagattta atgatggtag
    36421 ctggtaaaga agttgaaaat gcgattcaac gtgtcacaca aatggcacgt gcagcaggta
    36481 tacatttgat tgtagcgaca caaagacctt ctgtggatgt aattacaggt atcattaaaa
    36541 ataatattcc atctagaata gcttttgctg tgagttctca aacagattca agaactatta
    36601 ttggtactgg cggcgcagaa aagttacttg gtaaaggtga catgttatac gttggaaatg
    36661 gtgactcatc acaaacacgt attcaagggg cgtttttaag tgaccaagag gtgcaagatg
    36721 ttgtaaatta tgtagtagaa caacaacagg caaattatgt aaaagaaatg gaaccagatg
    36781 caccagtgga taaatcggaa atgaaaagtg aagatgcttt atatgatgaa gcgtatttgt
    36841 ttgttgttga acaacaaaag gcaagtacat cattgttaca acgccaattt agaattggtt
    36901 ataatagagc atctaggttg atggatgatt tagaacgcaa tcaggtaatc ggtccacaaa
    36961 aaggaagcaa gcctagacaa gttttaatag atcttaataa tgacgaggtg taaaaaaatg
    37021 tcagaaatga atgcggtata taacgttaaa caatacattt taaatttgat taagcaaaat
    37081 aaattggaat atggtgacca acttccaagt aatttatcaa ttgccagaga attaaatgta
    37141 aaaaccgacg atgtttatga agcaattcag gcattgatta ctgaacaagt cattaaagat
    37201 aattttgaag agggcacaag tgttaagtca ctgccccctt tcttttatcc attgaatgaa
    37261 cttataagta ttgggcaaat gattaaaaat gcaggatttg aatgcggaac tgaatactta
    37321 aattttgatg agcaaccagc aactatgtta gatgcaaatt tgttgagcgt tgaagaagga
    37381 tatccagtaa ccattataga acgattacga actgccgatg gagaaccggt cgtctattgt
    37441 ttagataaaa ttgctaaaaa agaattaaca tgtacagagt atcaaatgag caatggatcg
    37501 attctaagtg cgataaaaga acaaagtaat cataatattt gttatgctga tacagaaatt
    37561 gaagcggtaa attatgaacc tcgaatatcc gaagtactga atgcttcgcc acacgaaggt
    37621 ttgattttat taaaaattac gcactataat gaatcagatg aacctatttt gtattcatta
    37681 aattatatga aaaatagctt agttcaattt aaaatcacta gaaaaatata gatgtaagaa
    37741 gatatagagg aggctatata tttgagtaga caatctcaac caaatataca tatcaaagtt
    37801 tcaccaacaa ctaaatttaa aacaactact atagttttta aatttatggc acctttagaa
    37861 tatgacacaa taacagctag atcattatta agcaaattat tagttcgagc aactaagaaa
    37921 tggccaaccg ataagtcgtt taataatcac ttagccgatt tatatggtgc gtatgtgaat
    37981 agtacaattt caaaattcaa agatcagcat gtcattacat tttcattaga aattgttaat
    38041 gaacgttatt taagaaacgg tgaatcatta tttaatcaag gattagattt attacacgaa
    38101 atcatttgga atccattaat tgaaaataaa gcattcaatg ataattttgt taaccaagag
    38161 aaaacattat tagccaaaaa aatagaagca atggtagata ataaagcaca atattcgttt
    38221 ttaaaattac tcgaccatat gtttgaaaat gaagcatata aatacttatc tacaggacaa
    38281 ctagaacaaa tcccacatat tactgctgaa acactatatc atacatatca atcaatgatt
    38341 aataatgatc aatgttctgt ttatgttgtc ggcaatgtag aacctgaaag tgttgagaaa
    38401 caaatacgtg aaaaatttgc acttaaacca ttcgataaac atcaattcca acattctact
    38461 catcatttac acgatgaaga agttgattat attgttgaat atgatgacgt ggatcaagct
    38521 aaattaaata tgggataccg ttttccaaca caatatggac aaagtggata tgctgccttt
    38581 gttgtattta acatgatgtt tggaggagat ccttcatctg ttttatttaa tgaagtgcga
    38641 gaaaagcaaa gtttagcgta ctctatacat tcacaaattg atggcaaaaa tggctattta
    38701 tttgttttga gtggggtttc aagtgataag tacgaaactg caaaagatac tattataagt
    38761 gaatttgaaa aaataaaagc aggagatttc actgaagaaa aattagagtt agctaaaaaa
    38821 gtaatcattt ctcatcgata tgaatctgaa gatcgtccga aaagtattat agagattatg
    38881 cataaccaaa tattattaga gcaaccacaa agcaaagaaa catttataaa tgatatacag
    38941 aaggtaagtc gcgaagatat tgttactgtt gctgaaaaag catttttaga tacaatctat
    39001 gtgttgacaa aaggagggga taaataatga aagagcgtta ttatgaatta atagacgaaa
    39061 gagtattcga acaagaatta gaaaatggtt tacgattatt tattatcccc aaaccaggtt
    39121 ttcaaaagac atttgtcact tacactacac aatttggttc attagataat caattcaaac
    39181 ccctcggaca agaccaattt gttactgtac ctgatggagt tgctcacttt ttagaacata
    39241 aattatttga aaaagaagaa gaagacttat ttactgcgtt tgctgaagat aatgcacaag
    39301 caaatgcgtt tacaagcttt gatcgtacaa gctacttgtt cagtgcaact gataatattg
    39361 aaaacaacat taaacgttta cttacaatgg ttgaaacgcc ttattttaca aaagaaactg
    39421 ttgataaaga aaaaggtatt attgcagaag aaataaaaat gtatcaagaa caacctggat
    39481 ataaattaat gtttaataca ttgcgtgcaa tgtatcaaca acatccaata cgtgttgata
    39541 ttgccggtag tgtagaaagt atatacgata ttacaaaaga tgatttgtat ctatgttatg
    39601 aaacgtttta tcatccatca aatatggttt tatttgttgt tggtgatgtg aatccagaag
    39661 aaatatgtcg aatagtaaaa cagcacgagg atgctcgtaa taaagtaaac caacctaaaa
    39721 tcgaacgagg acttgttgat gaaccggagg atgttaaaga agcatttgtt actgaatcta
    39781 tgaaaattca atcaccaaga ctaatgcttg gttttaaaaa taaaccatta caagaagcgc
    39841 ctcaaaaata tgtacaacgt gatttagaaa tgtcattatt ctttgagtta atttttgggg
    39901 aagaaacaga tttttatcag aatttattaa acgaaggact tatcgatgat acatttggtt
    39961 atcaatttgt actagagccg acgtatagtt tttcaatcgt gacaagcgct actgaagaac
    40021 cagataaatt aaaaaaatta ttattagatg agttgcgtga taaaaaaggc aatttccaag
    40081 atgcacaagc atttgaactt ttgaaaaagc aatttatagg tgaattcata tcaagtttaa
    40141 actcacctga atatattgct aatcaatata ctaaattgta ttttgaaggt gttagcgtgt
    40201 ttgacatgtt agacattgtt gaaaatatca cgttagatag tattaacgaa acgtcatcgt
    40261 tatatttaaa tttagatcag caagtcgata gtcgtttgga gattaaaaag taatgaaagc
    40321 attagtatta ggtggttctg gttcaattgg ttctgagata gtcaaacaat tattaactga
    40381 tggatttgaa gtttatgtgc aatattatcg tactgatata aatgaattaa ctagcaaatt
    40441 taatgatgat aaagttcatt ttatacaaac ggatttatct caaacaactg atattgacaa
    40501 aacatttggt gacattaaat cattagactg tttaatatat gcaagtggtc agtctttata
    40561 tggtgtttta caagatatga aagaccatga tattgatgca tgttatcagt taaatgtctt
    40621 gcaattaatt cgattatgta gatatttcgt tgatgtttta cgtcaaagtg acaatggaag
    40681 aattattgta atttcatcaa tttggggtga gacaggagct agtatggaaa ctatttattc
    40741 gacgatgaaa agtgcacaat taggtttcgt taaggcgctt agtcaagagc ttgcactaac
    40801 atcagtgaca gtaaatgcta tcgcacctgg atttgtagcc ggtaatatgg caagtgagtg
    40861 gcaagaagat gaacttcaag caatgataac tgaattacca caacagcgat tggttttacc
    40921 gagtgaggtt gctcatacat gcgcctattt atatcaccca aatgctagaa gtgttactgg
    40981 aactatacag aaagttaatg gtgcttggta tatataaaat atataactat ttttatgagc
    41041 aaatgttttt atgattgatg ttataatatg aatattacaa tgaatcataa tttgttaatt
    41101 aaacaagggg tgaggttcac catgacagtt gcagagaaaa aagaatggta cctagaatac
    41161 gaaattgaaa ttaatagacc gggtctttta ggtgatgtat ctagtttatt aggtatgtta
    41221 ggtataagta ttgttacaat taatggtgtt gatcaaggta aacgaggcct tttaattaaa
    41281 actgacaatc ttgaaaaagt tgaacgtttt gagcaaatag ctcgtggtat aaatgaaatt
    41341 gaaataacaa agcttaaaaa accagaatta agagaccgtc ttgcagttag acatggtaga
    41401 tatattgagc aagatgcaaa agataagaaa acctttcgat ttgagcgtga agatttaggt
    41461 ttgttagtag actttttagc tgaattgttc aaagaagaag gtcataagtt gattggcatt
    41521 agaggtatgc cacgggttgg taaaactgaa tcaattgttg cgggaagtgt ttgtgcacat
    41581 aagagatggt tatttattag ttctacttta ataaaacaaa ctgtacgtag ctctctaatt
    41641 aaaggggaat atgatgccaa tcatgtatac attattgatg gtgcagttac tgccagagaa
    41701 tctaatccaa aacatcaaga gcttgttaac gaagttatga cgttaccatc aatcaaagtc
    41761 gttgaacatc cagatttatt tgttgaaaca agtacttgta caatggaaga ttttgactat
    41821 attatcgaat tgagagaaaa tgaaaatcaa gaaatacatt acgaagaaat gaagaaacag
    41881 acagtccaaa gtaagaataa tttagatttt ggagatccat ttggtggtgg ttttggtttc
    41941 ttcgagtaag tgtaaggagg ctatgaattg aaaacggtcg gtgaagcgct aaaaggtaga
    42001 cgtgaaaggt taggaatgac tttaacagaa ttagagcaac gtactggaat taaacgtgaa
    42061 atgctagtgc atattgaaaa taatgaattc gatcaactac cgaataaaaa ttacagcgaa
    42121 ggatttatta gaaaatatgc aagcgtagta aatattgaac ctaaccaatt aattcaagct
    42181 catcaagatg aaattccatc gaaccaagcc gaatgggacg aagtaattac agttttcaat
    42241 aataataaag atttagatta taagagtaaa tcaaaagagc caatacaatt attagtaatc
    42301 atgggtatta cagttttaat aactttattg ttatggatca tgttagtttt aatattttaa
    42361 cagaaataaa ttagtgagaa atgaggatgt ataatgaata ttccgaacca gattacggtt
    42421 tttagagtag tgttaatacc agtttttata ttgtttgcgt tagttgattt tggatttggc
    42481 aatgtgtcat ttctaggagg atatgaaata agaattgagt tattaatcag tggttttatt
    42541 tttatattgg cttcccttag cgattttgtt gatggttatt tagctagaaa atggaattta
    42601 gttacaaata tggggaaatt tttggatcca ttagcggata aattattagt tgcaagtgct
    42661 ttaattgtac ttgtgcaact aggactaaca aattctgtag tagcaatcat tattattgcc
    42721 agagaatttg ccgtaactgg tttacgttta ctacaaattg aacaaggatt cgtaagtgca
    42781 gctggtcaat taggtaaaat taaaacagca gttactatgg tagcaattac ttggttgtta
    42841 ttaggtgatc cattagcaac attgattggt ttgtcattag gacaaatttt attatacatt
    42901 ggcgttattt ttactatctt atctggtatt gaatactttt ataaaggtag agatgttttt
    42961 aaacaaaaat aaatatttgt ttatactaga tttcattttc atatggaatc tagttttttt
    43021 aatcccaatt ttagaaatta gccacgcaat tgtttataat gatatattgt aaaacgatat
    43081 ttgttcattt tttaggcaaa tgtgttgtag catctgatac attgaatcta aaattgatgt
    43141 gaatttttaa atgaaataca tgaaaaaatg aattaaacga tacaaggggg atataaatgt
    43201 caattgccat tattgctgta ggctcagaac tattgctagg tcaaatcgct aataccaacg
    43261 gacaatttct atctaaagta tttaatgaaa ttggacaaaa tgtattagaa cataaagtta
    43321 ttggagataa taaaaaacgt ttagaatcaa gtgtacgtca tgcgttagaa aaatatgata
    43381 ctgttatttt aacaggtggc ttaggtccta cgaaagatga cttaacgaag catacagtgg
    43441 cccagattgt tggtaaagat ttagttattg atgagccttc tttaaaatat attgaaagct
    43501 attttgagga acaaggacaa gaaatgacac ctaataataa acaacaggct ttagtaattg
    43561 aaggttcaac tgtattagca aatcatcatg gcatggctcc aggaatgatg gtgaattttg
    43621 aaaacaaaca aattatttta ttaccaggtc caccgaaaga aatgcaacca atggtgaaaa
    43681 atgaattgtt gtcacatttt ataaaccata atcgaattat acattctgaa ctattaagat
    43741 ttgcgggaat aggtgaatct aaagtagaaa caatattaat agatcttatc gataaacaga
    43801 ctaatcctac gattgcgcct ttggcgggaa gtcatgaagt atatattaga ttgactgcaa
    43861 atgccgactc aaaagaacaa gcacaatcat tgattcaacc tgttaaacaa gaaattcttg
    43921 atcgtattgg agaatattat tatggttcag atgacacatt aattgagcaa gctgtaataa
    43981 agaaaattca tgaacctttt gtaatatatg atggtattac taatggtgct ttatatcatc
    44041 gattgaaaga agtggattta aacgatgttc taaagggtat gattaatcac aatgaaaact
    44101 ttgttgatat taataaacct attgagcagc aattaaaaga tgcagtgcaa tttgttaata
    44161 aattgtttaa tgtgtcatca gcaattattc tattagagta tgatggtgta gtccatatag
    44221 gctatgataa taactttgaa tttaaaactg agcaatttaa aatgtctaaa tctagaaatt
    44281 tattaaagaa cagaagtcaa aattatgcgc tcataagatt attaaattgg cttagaacaa
    44341 caaattaatt gtattatcga taaaaatata agcacgtttg ttcgtttttg cgttttgatt
    44401 tcaagatttt atacgaacaa atattcgcaa aacacttgta ttttattttg aatccttgta
    44461 tagtattggt aagataatta aaagatagca atttcaatta ggaggtctcg ctttggataa
    44521 cgatcgtcaa aaagctttag atacagtaat taaaaatatg gagaaatctt tcggtaaagg
    44581 tgccgtaatg aagttgggtg acaatatagg tcgccgagtt tcaactacat caactggttc
    44641 agttacatta gataatgcgc taggtgtagg tggctatcct aaaggacgaa ttattgaaat
    44701 ttatggtcct gaaagttctg gtaagacaac agtagcgctt cacgctattg ctgaagtaca
    44761 aagtaatggc ggggtggcag catttatcga tgctgaacat gctttagatc cagaatatgc
    44821 tcaagcatta ggcgtggata tcgataattt atatttatcg caaccggatc atggtgaaca
    44881 aggtcttgaa atcgccgaag catttgttag aagtggtgca gttgatattg tagttgtaga
    44941 ctcagttgct gctttaacac ctaaagctga aattgaagga gaaatgggag acactcacgt
    45001 tggtttacaa gctcgtttaa tgtcacaagc gttacgtaaa ctttcaggtg ctatttctaa
    45061 atcaaataca actgctattt tcatcaacca aattcgtgaa aaagttggtg ttatgttcgg
    45121 taatccagag actacaccag gtggacgtgc attaaaattc tatagttcag taagactaga
    45181 agtacgtcgt gcagaacagc ttaaacaagg acaagaaatt gtaggtaata gaactaaaat
    45241 taaagtcgtt aaaaataaag tggcaccacc atttagagta gctgaagttg atattatgta
    45301 tggacaaggt atttctaaag agggtgaact tattgattta ggtgttgaaa acgacatcgt
    45361 tgataaatca ggagcatggt attcttacaa tggcgaacga atgggtcaag gtaaggaaaa
    45421 tgttaaaatg tacttgaaag aaaatccaca aattaaagaa gaaattgatc gtaaattgag
    45481 agaaaaatta ggtatatctg atggtgatgt tgaagaaaca gaagatacac caaagtcatt
    45541 atttgacgaa gaatagtaca caaatttata tctatagtta aacttagcaa atatccttat
    45601 aggattgatt gaaagtgata ttcgtctcat aaagctagaa taatatctaa ctttatggga
    45661 tgcactacaa atcgagacta taaggttttt tattttattt attattacat tatcaatagt
    45721 tttataatcg agcttcaaaa ctttagaaaa tagtagaaat agcattcaat atagtgcaaa
    45781 agtgcaaatt gataacttga cacttatctc ctataaaccg tacaattaat ttgtatgatt
    45841 tatatataat ttcataaagt catattgaat ttcatataaa gagcaaaccc tagaaaagga
    45901 ggtgtttgtg tgaatttatt aagcctccta ctcattttgc tggggatcat tctaggagtt
    45961 gttggagggt atgttgttgc ccgaaatttg ttgcttcaaa agcaatcaca agctagacaa
    46021 actgccgaag atattgtaaa tcaagcacat aaagaagctg acaatatcaa aaaagagaaa
    46081 ttacttgagg caaaagaaga aaaccaaatc ctaagagaac aaactgaagc agaactacga
    46141 gaaagacgta gcgaacttca aagacaagaa acccgacttc ttcaaaaaga agaaaactta
    46201 gagcgtaaat ctgatctatt agataaaaaa gatgagattt tagagcaaaa agaatcaaaa
    46261 attgaagaaa aacaacaaca agtagatgca aaagagagta gtgttcaaac gttaataatg
    46321 aagcatgaac aagaattaga acgcatctcc ggtctcactc aagaagaagc tattaatgag
    46381 caacttcaaa gagtagagga agaactgtca caagatattg cagtacttgt taaagaaaaa
    46441 gaaaaagaag ctaaagaaaa agttgataaa acagcaaaag aattattagc tacagcagta
    46501 caaagattag cagcagatca cacaagtgaa tcaacggtat cagtagttaa cttacctaat
    46561 gatgagatga aaggtcgaat cattggacga gaaggacgaa acatccgcac acttgaaact
    46621 ttaactggca ttgatttaat tattgatgac acaccagaag cggttatatt atctggtttt
    46681 gatccaataa gaagagaaat tgctagaaca gcacttgtta acttagtatc tgatggacgt
    46741 attcatccag gtagaattga agatatggtc gaaaaagcta gaaaagaagt agacgatatt
    46801 attagagaag caggtgaaca agctacattt gaagtaaacg cacataatat gcatcctgac
    46861 ttagtaaaaa ttgtagggcg tttaaactat cgtacaagtt acggtcaaaa tgtacttaaa
    46921 cattcaattg aagttgcgca tcttgctagt atgttagctg ctgagctagg cgaagatgag
    46981 acattagcga aacgagctgg acttttacat gatgttggta aagcaattga tcatgaagta
    47041 gaaggtagtc atgttgaaat cggtgtagaa ttagcgaaaa aatatggtga aaatgaaaca
    47101 gttattaatg caatccattc tcatcatggt gatgttgaac ctacatctat tatatctatc
    47161 cttgttgctg ctgcagatgc attgtctgcg gctcgtccag gtgcaagaaa agaaacatta
    47221 gagaattata ttcgtcgatt agaacgttta gaaacgttat cagaaagtta tgatggtgta
    47281 gaaaaagcat ttgcgattca ggcaggtaga gaaatccgag tgattgtatc tcctgaagaa
    47341 attgatgatt taaaatctta tcgattggct agagatatta aaaatcagat tgaagatgaa
    47401 ttacaatatc ctggtcatat caaggtgaca gttgttcgag agactagagc agtagaatat
    47461 gcgaaataat ttttgtctcc ctcacaaatt agtgagggag cttttttaag ttgtagtctc
    47521 aatctagtta gacagcactt tattggtaat aactatatta aacagtagtt atttgaaagt
    47581 aagtcggacc gtatataaaa taagaagtta ttgcttttaa taaaaatgtt ttaggcttca
    47641 taattactat atttatatta tgtaaaccta taaagatgat tgcttttcta tccaataaaa
    47701 aagaggctgg aacattaagt tcttaggcaa tgtaaaaaag ctgatttcta ttaattattt
    47761 gatagaaatc agcttttctg atatgtattt tataatgtac agctcgttga gctgctattt
    47821 ttcttatatt aagtgccgtt aatacaaaac ctaggtctcg tttaacttta tttattcctc
    47881 gaactgacat tcgagtgaaa cccaaaatag ccttcataaa tccaacaaca gactctacaa
    47941 caatttttct ttgactatag atttttttcg tttctggttc agaaagcttt tgattaactt
    48001 gggctttaaa g
//
LOCUS       DAKPJH010000006        46164 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.006, whole genome shotgun sequence.
ACCESSION   DAKPJH010000006 DAKPJH010000000
VERSION     DAKPJH010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 46164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46164
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.006"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            108..1316
                     /gene="gltS"
                     /locus_tag="OY092_000272"
     CDS             108..1316
                     /gene="gltS"
                     /locus_tag="OY092_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HCX1075248.1"
                     /translation="MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLI
                     FAILVATLDSFGMVKIKLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFC
                     AIISVIQNIVGVSLAKVLNIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTA
                     ALAAATLGLVFGGLIGGPVVKFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATE
                     VFFIQFTIVVFCMAVGSYFSHLFTSQTGINVPIYVGSLFVAVIVRNISESFNFNIVDL
                     KITNQIGDVALGIFLSLALMSIQLIEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLG
                     KDYDAAVMVGGFIGHGLGATPNAMANLDVITKKYGNSPKAYLVVPIVGAFLIDLIGVI
                     VIMGFIQWFS"
     gene            complement(1364..2413)
                     /locus_tag="OY092_000273"
     CDS             complement(1364..2413)
                     /locus_tag="OY092_000273"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HCX1075249.1"
                     /translation="MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVN
                     DIDLTSQTPDLTMAYPVYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRN
                     PRMAETFTIARKMNPEGMIFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPE
                     GNREFVTWLDNIASIVSRVSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNF
                     VDIENERRANKDMDYLSSWGQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALG
                     AKATGMSRPFLNQVENNGIAHTVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE
                     ILSWIEQRNLNIHRG"
     gene            complement(2444..3391)
                     /gene="corA"
                     /locus_tag="OY092_000274"
     CDS             complement(2444..3391)
                     /gene="corA"
                     /locus_tag="OY092_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HCX1075250.1"
                     /translation="MALTIRYQTTYEPFKVVDDIKEIPKDATIVWYDFDEPNEQENEW
                     FKAHFNFNDLEVDDAINGMPRAKYKSYKDYQYLVFHSIMGSNYSPIALNIFIQDNVLV
                     TYHHQTLESLNKVVYKYMNTLDAELDCADVVILILDMMVDKYFNFVYALEDSVYHFED
                     RHVDDRFNKMVMDSVFKLRSDLIKVKRVLFPMQELIDTMKQNGDLIIDNKHSLYIQHI
                     DDHLIKQRNIIRTAQEMTNEIRENFESYTSFRMNSIMQVLTLVSVIFSPLTFIAGIYG
                     MNFVNMPALHLHYGYYICLAVMFVIAVVLIIFFRRKKWF"
     gene            3488..3979
                     /locus_tag="OY092_000275"
     CDS             3488..3979
                     /locus_tag="OY092_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HCX1075251.1"
                     /translation="MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYS
                     HGLSLKERENLAYTLFTLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKED
                     GTLASTNEVMMMGINQHTRRSDAFPESFSTQIAHYYKNQPTITWPEQLGHKIAIPHKG
                     ALK"
     gene            3976..4395
                     /locus_tag="OY092_000276"
     CDS             3976..4395
                     /locus_tag="OY092_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075252.1"
                     /translation="MTDALQQKIHIELLDLLDDVKFELTELNAQKGLYINGPANQLLK
                     RGVHMAYVQGQKQAIDNIMTIVEQQLEDQHFLEHYDKFQNEVAHRNYDKTANFAELSD
                     IPRQFDNFLDQFYQIKGQYFIITHINTLIGDFHSEAH"
     gene            complement(4500..5420)
                     /locus_tag="OY092_000277"
     CDS             complement(4500..5420)
                     /locus_tag="OY092_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000620861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1075253.1"
                     /translation="MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKRKIENRKKH
                     KQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKI
                     TLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALS
                     FVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANG
                     LPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMV
                     HDFPIYPIRQSHKAIKQIAKSIDEDVTQNN"
     gene            5628..6266
                     /locus_tag="OY092_000278"
     CDS             5628..6266
                     /locus_tag="OY092_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075254.1"
                     /translation="MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVI
                     LTAIAGYSMWKQPIFNIVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDR
                     LILVFNGFFILCIVSLVITILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQE
                     IADVFKKYYVNVPPDQVITEADAIHNGIILLGCSIGLLVISLFFRNRMPRLK"
     gene            complement(6513..8450)
                     /locus_tag="OY092_000279"
     CDS             complement(6513..8450)
                     /locus_tag="OY092_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HCX1075255.1"
                     /translation="MTTTFIISYIVLALIIVGVINLLLIRSRRKAKRQQKEQHFATRQ
                     SNQSKFKASDLDRTTDQSSQHTAREEARIDNQDNQNQVSLNKQTEGSEQNQASFTDNN
                     ESDEEVYAAKNPKSEEYKVNEKIKKEHKNFIFGEGVSRGKILAALLFGMFIAILNQTL
                     LNVALPKINTEFNISASTGQWLMTGFMLVNGILIPITAYLFNKYSYRKLFLVALVLFT
                     IGSLICAISMNFPIMMVGRVLQAIGAGVLMPLGSIVIITIYPPEKRGAAMGTMGIAMI
                     LAPAIGPTLSGYIVQNYHWNVMFYGMFIIGIIAILVGFVWFKLYQYTTNPKADIPGII
                     FSTIGFGALLYGFSEAGNKGWGSVEIETMFAIGIIFIILFVIRELRMKAPMLNLEVLK
                     FPTFTLTTVINMVVMMSLYGGMILLPMYLQNLRGFSALDSGLLLLPGSLIMGLLGPFA
                     GKLLDTIGLKPLAIFGIAVMTYATWELTKLNMDTPYMTIMGIYVLRSFGMAFIMMPMV
                     TAAINALPGRLASHGNAFLNTMRQLAGSIGTAILVTVMTTQTTQHLSAFGEELDKTNP
                     VVQDHMRELASQYGGQEGAMKVLLQFVNKLSTVEGINDAFIVATIFSVIALILCLFLQ
                     SNKKAKATAQKIDADNSINHE"
     gene            complement(8463..9110)
                     /locus_tag="OY092_000280"
     CDS             complement(8463..9110)
                     /locus_tag="OY092_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCX1075256.1"
                     /translation="MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQ
                     IKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQDGETKDMELKMPQKGTIAKLDG
                     MEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDS
                     IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN"
     gene            9231..9785
                     /locus_tag="OY092_000281"
     CDS             9231..9785
                     /locus_tag="OY092_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001661235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1075257.1"
                     /translation="MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDY
                     YKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKRNEQFF
                     KDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
                     NGCNESPEEVADILLANTIKLQNQ"
     gene            complement(10012..11220)
                     /locus_tag="OY092_000282"
     CDS             complement(10012..11220)
                     /locus_tag="OY092_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HCX1075258.1"
                     /translation="MNDLKRFNKRSPIFIIILGSLTAIGALSIDMFLPGLPDIRHDFQ
                     TTTSNAQLTLSMFMIGLAFGNLFAGPISDSNGRRKPLIIAMIIFTLASLGIVFVHNIW
                     LMIALRFLQGVTGGAAAVISRAIASDMYSGNELTKFMALLMLVNGIAPVVAPTIGGII
                     LNYSVWRMVFVILTIFGFVMVIGSLLKVPESLTVTNRESSSGLKTMFKNFKILLKTPR
                     FVLPMLIQGMTFVILFTYISASPFIIQKIYGMTAIQFSWMFAGIGITLIISSQLTGYL
                     VDFIDSQKLMRVMTMIQIIGVILVTIVLLNHWNFWILAIGFIILIAPVTGVATLGFTI
                     AMDESSSGRGSSSSLLGLVQFLFGGIASPLVGVKGEDNPIPYIIIIIATAVILIILQI
                     YNMKVFKTNR"
     gene            complement(11330..11457)
                     /locus_tag="OY092_000283"
                     /pseudo
     CDS             complement(11330..11457)
                     /locus_tag="OY092_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501095.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11488..12870)
                     /locus_tag="OY092_000284"
     CDS             complement(11488..12870)
                     /locus_tag="OY092_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HCX1075259.1"
                     /translation="MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNN
                     IKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTK
                     DNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
                     SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIP
                     GTYRIPAMKSTENGDFAGHLKFDFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSK
                     KVTINDREMAFSSFKTYGPYPQNKDITISASGKAKDKTFTTQTKTIKASDLKYNTEIT
                     LNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSS
                     FYDDVKKRVSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQD
                     RLQLIKTSEK"
     gene            complement(13110..13565)
                     /locus_tag="OY092_000285"
     CDS             complement(13110..13565)
                     /locus_tag="OY092_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1075260.1"
                     /translation="MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVL
                     GMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDK
                     GRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK"
     gene            13760..14728
                     /locus_tag="OY092_000286"
     CDS             13760..14728
                     /locus_tag="OY092_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HCX1075261.1"
                     /translation="MLLNLLLLFILIVICPLIFNYTLTLNLTCYILVVISIFLSLIYS
                     IMTYTFPWSMFITFIIISIIMLFKHRYLFSHTSSRLFIKKLLSFSYKFVLYTSALLFI
                     STIQSPIVKGLSMWLAILCLSLLLTFICYLVWTVSYRHRSYNKEVDIIIVLGAGIFTE
                     FVTPMLAARLDRALDIYQQQVSATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDI
                     LMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS
                     HTPYHFFLHVLIKDYLGVMYQYRLLLTLYCSSSWFICLYAAFIYNS"
     gene            complement(14959..15624)
                     /locus_tag="OY092_000287"
     CDS             complement(14959..15624)
                     /locus_tag="OY092_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075262.1"
                     /translation="MALVVKDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSG
                     KTTLLTILGGLLSQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIE
                     QLTLVGQEAGMTKQQSSTRAIQLLENIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNP
                     KIILADEPTASLDADRATKVVEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGK
                     ITD"
     gene            complement(15624..16679)
                     /locus_tag="OY092_000288"
     CDS             complement(15624..16679)
                     /locus_tag="OY092_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075263.1"
                     /translation="MKLAIKEIMFYKFRYILITLIILLLSIMVLFISGLAQGLGRENI
                     SLFEHFDNDEYVVQKMKEPQIEKSQLSDTQQNQIKKVIHQEPYKMNIQTLKLSNKEQD
                     VITMNDVKQQRIQLKKGDYPKNAHEVAINDKLAADNIRVGDRLHFKNNSTSYRVSGIL
                     NDTMYAHSSIVLLNDNGFNALNKVNTAFYPVKNLTQQQRDELNKINDVQVVSEKDLTG
                     NIASYQAEQAPLNMMIVSLFAITAIVLSAFFYVMTIQKISQIGILKAIGIKTRHLLSA
                     LVLQILTLTIIGVGIAVIIIVGLSFMMPVTMPFYLTTQNILLMVGIFILVAILGASLS
                     FVKLFKVDPIEAIGGAE"
     gene            16815..17489
                     /gene="hssR"
                     /locus_tag="OY092_000289"
     CDS             16815..17489
                     /gene="hssR"
                     /locus_tag="OY092_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding heme response regulator HssR"
                     /protein_id="HCX1075264.1"
                     /translation="MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQ
                     RVDIAVVDIMMDGMDGFQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKP
                     FEVKELIFRIRAVLRRYNINSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFM
                     LAARPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGY
                     KVENHV"
     gene            17482..18855
                     /gene="hssS"
                     /locus_tag="OY092_000290"
     CDS             17482..18855
                     /gene="hssS"
                     /locus_tag="OY092_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme sensor histidine kinase HssS"
                     /protein_id="HCX1075265.1"
                     /translation="MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKI
                     MKTLKEARQYEQSAKPTHIQQYFKHLGQMNYQIMTVDQKGHKTFYGEPFREDTLSQNA
                     INNVLNNKDYHGIKDKPFALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFS
                     EFRTFLAVLLMLLLFISISLVIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDE
                     IGTLQYHFNKMRESLRQVDQMRQHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQ
                     YINDIYTITTQLSGLTTELLLLSELDNHQHLLFDDKIQVDQLIKDIIRHEQFSADEKS
                     LIILADLESIDFLGNQRLLHQALSNLLINAIKYTDVGGAIDIALQHSHNNIIFTISND
                     GSPISPQAEARLFERFYKVSKHDNSNGLGLAITKSIIELHHGTIQFTQSNEYVTTFTI
                     TLPNNSH"
     gene            19018..19461
                     /locus_tag="OY092_000291"
     CDS             19018..19461
                     /locus_tag="OY092_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1075266.1"
                     /translation="MMKLNLFINATETESYIDIHAPKMNDHVQSIINAVNDLDKSHTL
                     VGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKS
                     EIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI"
     gene            19458..19913
                     /locus_tag="OY092_000292"
     CDS             19458..19913
                     /locus_tag="OY092_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 domain-containing protein"
                     /protein_id="HCX1075267.1"
                     /translation="MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILY
                     YNHFTETTVMLISIILWLLIGVVFFLGDFIFKYTDWGITKATIVHFITTYVGFLPLAI
                     LAGWFPLTINSLIIFTIIFIVVYTLIWIIQFFKNKNYVDTINEQLKQLK"
     gene            complement(20090..20653)
                     /locus_tag="OY092_000293"
     CDS             complement(20090..20653)
                     /locus_tag="OY092_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000372852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HCX1075268.1"
                     /translation="MDQTAFTDSRVTKTINRIHDGMVNLLKMKAYNDITVKDICEKSQ
                     ISRTTFYTHYKTKDDFIYSYLNTLLKVAKKKFIKERPMTQAVFFKRMIYYWLSEGQLI
                     LMLLGDESAYKLHQVIKKSLQQRIEINVVPVLNTKMLTTKEKYFLLIFMSNAIIGVLQ
                     DWVKRGYKESPKEVAEIMNKIFENAFR"
     gene            20787..21515
                     /locus_tag="OY092_000294"
     CDS             20787..21515
                     /locus_tag="OY092_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000388431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075269.1"
                     /translation="MDATIAKLDKVVKTYNKHHVLNEISMSINKGELLGLIGPSGSGK
                     TTTIKCLLGMEKVDSGSAEIFAHKMPNRKALNRLGYMGQTDALYENLTAYENLEFYGR
                     LSGLKGNVLKDNIEKNIVLVNLEQALNKKVAQFSGGMKRRLSLAITLLAEPELIILDE
                     PTVGIDPKLRQQIWQQFKQMTKDGKSVVITTHVMDEAERCDKVGLIVDGRIFAIDTPT
                     NLKQRFNVDTIEAVFIKAEEVRQS"
     gene            21512..22594
                     /locus_tag="OY092_000295"
     CDS             21512..22594
                     /locus_tag="OY092_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000696075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075270.1"
                     /translation="MKILAIVKRVLKEMLRDKRTLALMFLAPILILTLMYFIFNGDEN
                     DLKIGIDTSVSSNITKQLPSSDIKTQTFHSHENIRSKIENNHLDGYIYQENQTLHVIY
                     TNEDPNKSNMIKQMIGKAIQQDKISSIKHLIEKAPPTMKAPNKQDIKISHSYLYGNSD
                     STYFDKMFPILMGFFVFLFVFLISGIALLRERTTGTLERVLSTSIRRSEIVLGYLIGY
                     GIFAIIQTLIIVLFSIYLLNINLAGSLWYVILINICLAITALSMGIFISTFANSEFQM
                     IQFIPLVAVPQVFFSGIFPLENMPDWLGNIGYLFPLRYAGDALTNIMIKGQGWSNIWF
                     DLLILMIFIIVFIILNIVGLKRYRQV"
     gene            complement(22721..24199)
                     /gene="mqo"
                     /locus_tag="OY092_000296"
     CDS             complement(22721..24199)
                     /gene="mqo"
                     /locus_tag="OY092_000296"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HCX1075271.1"
                     /translation="MTTQHSKTDVILIGGGIMSATLGTLLKELSPEKNIKVFEKLAQP
                     GEESSNVWNNAGTGHSALCELNYTKEGKDGTVDCSKAIKINEQYQISKQFWAYLVKTG
                     QLDNPDRFIQAVPHMSFVIGEDNVAFIKSRVATLKKSVLFEKMKLSQDEEEMKSWVPL
                     MIEGRKSDEPIALTYDETGTDVNFGALTAKLFDNLEQRGVEIQYKQNVLDIKKQKSGA
                     WLVKVKDLETNETTTYESDFVFIGAGGASLPLLQKTGIKQSKHIGGFPVSGLFLRCTN
                     QEVIDRHHAKVYGKAAVGAPPMSVPHLDTRFVDGKRSLLFGPFAGFSPKFLKTGSHMD
                     LIKSVKPNNIVTMLSAGIKEMSLTKYLVSQLMLSNDERMDDLRVFFPNAKNEDWEVIT
                     AGQRVQVIKDTEDSKGNLQFGTEVITSDDGTLAALLGASPGASTAVDIMFDVLQRCYR
                     DEFKGWEPKIKEMVPSFGYRLTDHEDLYHKINEEVTKYLQVK"
     gene            complement(24580..26178)
                     /locus_tag="OY092_000297"
     CDS             complement(24580..26178)
                     /locus_tag="OY092_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HCX1075272.1"
                     /translation="MLVNTFNPFDNLLLSSLIAAIPIVLFLLCLTVFKMKGIYAAITT
                     LVVTLLIAIPFFKLPVGIASGAVVEGFFQGIIPIGYIVMMAVLLYKITVESGQFLTIQ
                     DSITNISQDQRIQVLLIGFAFNAFLEGAAGFGVPIAICALLLTQLGFNPLKAAMLCLV
                     ANAASGAFGAIGIPVGVVETLKLPGDVSVLGVSQSATLTLAIINFIIPFLLIFIIDGF
                     RGVKETLPAILVVSITYTLTQGLLTVFSGPELADIIPPLLTMLALAVFSKKFQPKHIY
                     RVNKDEEIEPAKAHSAKAVLHAWSPFIVLTVIVMIWSAPFFKNLFLPNGALSSLVFKY
                     NLPGTVSEVTHKPLVLTLNIIGQTGTAILLTIIITILMSKKVNFKDAGRLFGVTFKEL
                     WLPVLTICFILAISKITTYGGLSAAMGQGIAKAGNVFPVLSPILGWIGVFMTGSVVNN
                     NSLFAPIQASVAQQIGTSGSLLVSANTVGGVAAKLISPQSIAIATAAVKQVGKESELL
                     KMTLKYSVCLLIFICIWTFILSLL"
     gene            26495..28168
                     /locus_tag="OY092_000298"
     CDS             26495..28168
                     /locus_tag="OY092_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HCX1075273.1"
                     /translation="MIKQINVSNMQKFESQLMKAQSEGYTHVVPYANEIMIYQSMLDA
                     VQLYPKSIVVDYTVDGQYKNDCHYFGQSTINIADWAQNNNYYPNLIYAIQQTLDLIHY
                     YSVETIFDLALLTLLKGDLSIDGHVVFDFKAPLATSASIWETIKTIEDFDMMSQFYLN
                     KMAYIDHHPIPFRNLFIEDSEQLNSPDNWLYSTKFMLPKWLYKIAKQRADNKQLQNFG
                     LYTKQPNVLKDHIVFIGDHHQYIGNSKYLFTYFVKHNPMTACYFVTDDRRGPHFISPK
                     SEKADELINSARVVLVENDIPETLQPNGTLIQLHQGTPIMQLFLDSKEPIKNIETPFY
                     RAKRYNRWLQFDYVIHSADDISHFYQTAFPSHQANVLAYGNPKHQYLLQKRNESTTQQ
                     QYKKSFKINDQKPVLLYAPIGLVSAQQLPLSDALFKAYHVVVQGIDETMLPEEAIVAP
                     KYLSAQDLILMSDVVITDYSNIIFDAMAIDKSVALYTPNHSQYIESQGVNEDIWRHLS
                     KIWYTDRQLLINNLISQAIPVIKYPQIQHKEQPLESISQLILSKMTSNQ"
     gene            complement(28324..28953)
                     /locus_tag="OY092_000299"
     CDS             complement(28324..28953)
                     /locus_tag="OY092_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075274.1"
                     /translation="MKRLVTGLLALSLFLAACGQDSDQQKDSNKEKDDKAKTEQQDKK
                     TNDSSKDKKDNKDDSNDVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANN
                     NQKSSYVAPYYGQNAAPVARQIYPFNGNKTQALQQLPNFQTALNAANNEANKFGSNNK
                     VYNDYSIEEHNGNYKYVFSFKDPNANGKYSIVTVDYTGQAMVTDPNYQQ"
     gene            complement(29267..29782)
                     /locus_tag="OY092_000300"
     CDS             complement(29267..29782)
                     /locus_tag="OY092_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075275.1"
                     /translation="MAGIIKEISKQDAGELVELATRTFYDTFGSYYDDKDFDQFFKDN
                     YTVEKFTQEINHVDSFHYFYQEDGANVGYIKMNINSAQTEEMGETYLEVQRIYFLKDF
                     QGGGRGSQLIELAEKIAQEHNKHKIWLGVWEHNPRAQAFYKRHGFKVVGEHHFQTGDV
                     TDTDLIMEKEL"
     gene            29973..30977
                     /locus_tag="OY092_000301"
     CDS             29973..30977
                     /locus_tag="OY092_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCX1075276.1"
                     /translation="MIETFKAFVIDKDESGKVTPTFKQLSPTDLPKGDVLIKVHYSGI
                     NYKDALATQDHNAVVKSYPMIPGIDLAGTIVESEAPGFEKGEQVIVTSYDLGVSHYGG
                     FSEYARVKSEWIIKLPDTLTLEESMIYGTAGYTAGLAIERLEKVGMNIEDGPVLVRGA
                     SGGVGTLAVLMLNELGYKVIASTGKQDVSDQLLELGAKEVIDRLPVEDDHKKPLASST
                     WQACVDPVGGEGINYVTKRLNHSGSIAVIGMTAGNTYTNSVFPHILRGVNILGIDSVF
                     TAMKLRQRVWRRLAKDLMPENLHEIKQVITFDELPEQLNKVIKHENKGRIVIDFGVDK
                     "
     gene            complement(31159..31335)
                     /locus_tag="OY092_000302"
     CDS             complement(31159..31335)
                     /locus_tag="OY092_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000687295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075277.1"
                     /translation="MKIDTLRQAIIYYFVALVLSALMIYLFLTNIERVILYSCAFTVV
                     YWAIYAFDVYRKRN"
     gene            complement(31500..31901)
                     /locus_tag="OY092_000303"
     CDS             complement(31500..31901)
                     /locus_tag="OY092_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075278.1"
                     /translation="MVKVTYDIPTCEDYCALRINAGMSPKTREAAEKGLPNALFTVTL
                     YDEDRLIGMGRVIGDGGTVFQIVDIAVLKSYQGQGYGSQIMEHIMKYIKNVSVESAYV
                     SLIADYPADKLYTKFGFMPTEPDSGGMYIKF"
     gene            complement(31937..32971)
                     /locus_tag="OY092_000304"
     CDS             complement(31937..32971)
                     /locus_tag="OY092_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075279.1"
                     /translation="MKDVTIIGGGPSGLYASFYAGLRDMSVRLIDVQSELGGKMRIYP
                     EKIIWDIGGIAPKPCHEILKDTIKQGLYFKPEVHLNERVVDIRKKAERHFEVETEAGE
                     IYTSKAVIIAIGAGIINPKQLDVKGVERYQLTNLHYVVQSYRRFKDKDVLISGGGNTA
                     LDWAHDIAKIAKSVTVVYRKEDVSGHEAMKTLVTDLNVKLCPKTRIKYLVGNDDETHI
                     SEVVLEHVESGDTHTVKFDDVIISHGFDRCNTLLSETSSKLDMHDDCRVKGFGNTTTS
                     IPGIYACGDIVYHDAKSHLIASAFSDGANAANLAKTYIQPDANAEGYVSSHHEVFKEA
                     NKTIVNKHLY"
     gene            complement(32982..33098)
                     /locus_tag="OY092_000305"
     CDS             complement(32982..33098)
                     /locus_tag="OY092_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075280.1"
                     /translation="MANYAIYFNNININSIMSLNDNNYQFERVNERNEYRES"
     gene            complement(33203..33634)
                     /locus_tag="OY092_000306"
     CDS             complement(33203..33634)
                     /locus_tag="OY092_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2871 domain-containing protein"
                     /protein_id="HCX1075281.1"
                     /translation="MRRLLYSFLFYMIIGLFSGFFYRELTKAYDFTGTTQLSLVHTHT
                     LILGMFMFLILLPLEKLFKLSSYYLFNWFFYVYNIGVIVTIGMMVTKGFFQVTGKSYS
                     PEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRDESFKK"
     gene            complement(33840..35117)
                     /locus_tag="OY092_000307"
     CDS             complement(33840..35117)
                     /locus_tag="OY092_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HCX1075282.1"
                     /translation="MNIFQNKLLWIAPIATMIILVIFSLAFYPAYNPKPKDLPIGILN
                     EDKGTTIQDKNVNIGKKLEDKLLDSDSNKIKWVKVDSEKDLEKDLKDQKIFGVAIIDK
                     DFSKDAMSKTQKVVMDSKKEEMQQKVASGEIPPQVVQQMKQKMGNQQVEVKQAKFKTI
                     VSEGSSLQGSQIASAVLTGMGDNINAQITKQSLETLTSQNVKVNAADINGLTNPVKVD
                     NEKLNKVKDHQAGGNAPFLMFMPIWIGSIVTSILLFFAFRTSNNIVVQHRIIASIGQM
                     IFAVVAAFAGSFVYIYFMQGVQGFDFDHPNRIAIFVALAILGFVGLILGVMVWLGMKS
                     IPIFFILMFFSMQLVTLPKQMLPESYQKYVYDWNPFTHYATSVRELLYLNHQIELNST
                     MWMFIGFMIFGAVSSLVSAIVRKHSTKRTEVPS"
     gene            35278..35901
                     /locus_tag="OY092_000308"
     CDS             35278..35901
                     /locus_tag="OY092_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1075283.1"
                     /translation="MKEDRRIRKTKSSIKQAFTKLLQEKDLEKITIRDITTRADINRG
                     TFYLHYEDKYMLLADMEDEYISELTTYTQFDLLRGSSIEDIANTFVNDILKNIFQHIH
                     DNLEFYHTILQLERTSQLELKINEHIKNNMQRYISINHSIGGIPEMYFYSYVSGATIS
                     IIKYWVMDKQPISVDELAKHVHNIVFNGPLRIMAENRLHKSNLDSLT"
     gene            35947..36891
                     /locus_tag="OY092_000309"
     CDS             35947..36891
                     /locus_tag="OY092_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HCX1075284.1"
                     /translation="MITSFRHSEDIDKHIIKTPLDHTASWINVVEPDREEIENLMEQY
                     NIPEDFIRDPLDSEESSRIEYDEDTGYSLIIIDLPIVNSTNRSVLSFVTIPLGIIIGN
                     GIIVTVCDAENEFLENLPKRDINLKFHSRFALEILTTIADHYNRNLRLLNKSRIRIEK
                     ELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLI
                     IENNQAIETTELHQRILESITTSYASLLSNDMNTIMKTLTLFTVLLTLPTLVFSFFGM
                     NVPLPIDDHSYISWIIVVGISLILVVIVSIFLWRKQKL"
     gene            complement(36977..38419)
                     /locus_tag="OY092_000310"
     CDS             complement(36977..38419)
                     /locus_tag="OY092_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
                     /protein_id="HCX1075285.1"
                     /translation="MNYKQSAEDILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEA
                     LNNMDVVKGTFSTGGQYQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPL
                     QRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMIN
                     VFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIP
                     YWDVFGLHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAF
                     LTFSFVGPITRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETT
                     LIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGISALLGITE
                     PAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLH
                     YFVGMTISFIVAITVTLILSKRKANKEVVE"
     gene            38602..38985
                     /locus_tag="OY092_000311"
     CDS             38602..38985
                     /locus_tag="OY092_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HCX1075286.1"
                     /translation="MKERGHIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQ
                     MIDDALLIEPSIGSVCNAFDHMWGYFKKCANEEERQQSKLLKADFINGKIDTQTLLDF
                     LAELANKYDVQYLLQSRVLNTKRKR"
     gene            40473..42578
                     /gene="rsp"
                     /locus_tag="OY092_000312"
     CDS             40473..42578
                     /gene="rsp"
                     /locus_tag="OY092_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator Rsp"
                     /protein_id="HCX1075287.1"
                     /translation="MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVS
                     NYIILINHGDIYNINHGENIIELMIPVFYFHQQDDDFFNGYLDRHLLQSSNYIKSLIA
                     DLISTPTSSSLMGKNIGQSIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNI
                     DAHLSLKDIAMHCNISESYCSNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTV
                     SELAGFNSHTNFANQFKNYLHFSPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTID
                     LTAQLATNTTDIHIDDFNPKDRSQRAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPV
                     VFIDDIHDIEISQTNYNLLNRCFEKLFEKNIGLAIAIKSTQQFETMKQLILTFLQGNQ
                     DYKTSKKLVKFMLVFCSNSMTAEEIHLCHLKIKNKNKEIKYSVTVDGFLETYSTVEQV
                     YDVMQRLKFHYYFIDIENSKTATHLITKNQHYHQTDTHFEQYKKFILDSGISSTQFVY
                     NNLSVSGFKYTNDGKNPIQLSDIVYHLIALLRYGGGISYQLLDDHSNYISLYNKYGSP
                     LPLMHLYKMFRPFVNEDIEITNNYVLSRKDNNYHFLLFNKINDRYMSDVKQDFIFHNE
                     LPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEILDELDKTNYPKTELAVQEETGR
                     TFELKLNHDEVKYICFKPS"
     gene            42649..43071
                     /locus_tag="OY092_000313"
     CDS             42649..43071
                     /locus_tag="OY092_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HCX1075288.1"
                     /translation="MSNSQAIQAIENVLATSKVGVLSTAYNNKPNSRYMVFYNDGLTL
                     YTKTNIHSAKVKEIKDNPAAYVLLGYNDTTNRSFVEMEATIEIVTEQEVIDWLWETQD
                     KSFFSSKEDPELCVLRVVPQSIKLMNDKSLDTPIKIDL"
     gene            43349..43705
                     /locus_tag="OY092_000314"
     CDS             43349..43705
                     /locus_tag="OY092_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HCX1075289.1"
                     /translation="MKNKKGFGLGISLIAIMLIVCIVLVIMMMTGGKKDTYYGIMKDN
                     ATIEKMISEKDESIEKNVKLPSDADVSVKKGDFVIVYKLADSDKIVKVKKVDHDDVPH
                     GLMMKIHDMGKMHMKH"
     gene            complement(44265..45542)
                     /locus_tag="OY092_000315"
     CDS             complement(44265..45542)
                     /locus_tag="OY092_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HCX1075290.1"
                     /translation="MALFKRKISLPMQVVIALVLGVVVGLLLYGQENVANYIKPFGDV
                     FLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNL
                     FKPGAGLDPTKLPKGDISKYQSTAHAAEQSTYGNHFIDTIVHIIPTNFFEALNKGELL
                     PIIFFAVFFGLGLAAVGKKAEPVKEFLSGSLEAVFWMINKILKLAPLGVFAFICTTII
                     TFGASALLPLLKLVLVVVFAMVFFVFAILGLVAWMCGINIMNIIRILKSELLLAFSTS
                     SSEAVLPVMMKKMENFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLT
                     LSEQIVLMLTLMITSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRILDMVRT
                     CVNVIGNALSTIVIAKWENVYDKAKGQEYLKSI"
     gene            complement(45724..46089)
                     /locus_tag="OY092_000316"
     CDS             complement(45724..46089)
                     /locus_tag="OY092_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3139 domain-containing protein"
                     /protein_id="HCX1075291.1"
                     /translation="MKKKKNVIKVIIILFISLIVAVAFFFGLKTYQGHKNIQLIDSYL
                     EEKSLKDKIKSEKTEYSAKKGLFYKEVTFKDEPGVTYVVQPISTNKGLFVEGFDTETK
                     KSLKTAKHKYFNQNYKPSK"
BASE COUNT        15499 a         7992 c         6606 g        16067 t
ORIGIN      
        1 tagaaatatt gatttgttgc atgtataatg ttaaaagtgc ccttttataa cgcttacata
       61 taaaagctta tttagggaga gggatattca acaaggggga tttgaaaatg atagaactta
      121 atgcaattac aacattatgt ttagcctgta tactttactt acttggtaaa gctatcgtta
      181 atcacgttaa ttttttaaaa cgcatttgta taccagcacc tgtgattggc ggcttaatct
      241 ttgctatttt agttgcgact ttggattcat ttggcatggt taagattaaa ttagatgctt
      301 cattcattca agatttcttc atgttagcat tctttacgac aatcggtctt ggtgcatcat
      361 tgaaattatt taaattaggt ggcaaagtct tgctattata ctttatgttt tgtgctatca
      421 tttcagtcat tcaaaacata gttggtgtat cactagcaaa agtattaaat attaaacctt
      481 tgttaggatt aacagcaggt tccatgtcta tggaaggcgg tcatggtaat gctgctgctt
      541 atggtaagac aattcaagat ttaggcattg actcagcact gacagcggct cttgcagctg
      601 caactttagg tcttgtattt ggagggctta tcggtggtcc tgttgtaaaa tttttaatca
      661 aacgttataa cttaaagcct caacatagtg acgatacatt taaagattat agccaagtag
      721 catataacga acatttacat agtaaattta atgccactga agtattcttc attcaattta
      781 caatcgttgt attctgtatg gcagttggaa gttatttcag tcatttgttt acatctcaaa
      841 cagggattaa tgttccaatt tacgttggct cattatttgt agctgttatt gtccgaaata
      901 tctctgaaag ttttaatttt aatattgtag atttaaaaat tactaatcaa attggtgatg
      961 tcgcattagg tattttctta tctcttgcgc taatgagcat tcaattaatc gaaatttata
     1021 aacttgctat acctcttatt attatcgttt tagttcaagt tgtcgttatg attttatttg
     1081 ctgttttaat tttatttaga ggtttaggaa aagattatga tgctgcagta atggtaggtg
     1141 gttttatcgg gcatgggctt ggtgcaacgc caaatgccat ggcaaattta gatgttatta
     1201 ctaaaaaata tggaaactca cctaaagcat atttagttgt acctattgtt ggtgcattct
     1261 taatcgattt aattggtgtt atagtcatta tgggattcat tcaatggttt agttaaacac
     1321 caaactcata aataaaagag gaggccttcg cctcctcttt tatttatcct cgatgtatat
     1381 tcaagttacg ttgttctatc catgacaata tttccggact aaatacgatt tgtttttgtg
     1441 ttaagtcgtc aatattttta gcatctaaca tcgtcattat tgatttcatg tgttcaataa
     1501 atgattctac ataagctact gtatgtgcaa tgccattatt ttcaacttga tttaaaaacg
     1561 gacgtgacat accagttgcc tttgcaccaa gtgctaaact tttaattgca tcgagtggtg
     1621 tacgtaaacc accactcgcg aaaactgaaa tttcgctttg ataagccgtt gtttcaagta
     1681 atgactcaac tgtagactgt ccccatgatg ataagtaatc catatcttta tttgcacgac
     1741 gttcattttc aatatctaca aagttagtac cacctttgcc actaacatcg acatacttga
     1801 cgcctatttg ttgtaagtca tgcattaatt ctttgctcat accaaatcca acttctttta
     1861 taatgactgg aacagacact cgtgatacaa tcgacgctat attatctaac caagtcacaa
     1921 attcacgatt cccttcaggc ataactaatt cttgaggaga attaacatgg atttgtaacg
     1981 cttgtgcctc aagtaattca actgcttcca aagccttttc tactggtacg tccgcaccaa
     2041 cattgctaaa aatcatgcct tcaggattca tttttcgcgc aatcgtaaac gtctcagcca
     2101 tgcgtggatt tctcaatgct gcatgtgttg atccaactgc catcgctaag ccagtttctc
     2161 ttgcaactac agctagcttt tcattgatgt ttttcgtcca ctcgctacca cccgtcattg
     2221 cattaatata aaccggatat gccatcgtta agtcaggcgt ctgtgatgtc aaatcgatat
     2281 catttacatt aattgatggg atagaatgat gcacaaaacg catcttatca aaatctgaat
     2341 gcattgcgtc agattgagcc attgctattt caacatgttc attttttctc tgttctcttt
     2401 gaaaatcact catgattaaa cctacctttt cgtcatttct aatttaaaac cattttttac
     2461 gtctgaaaaa gatgattaat acgacagcta taacaaacat tacagctaag caaatataat
     2521 atccataatg taaatgtaat gccggcatat ttacaaagtt cataccataa atcccagcta
     2581 tgaatgttaa cggtgaaaat ataactgata ctaatgtcag tacttgcata atactattca
     2641 ttctaaatga cgtgtatgac tcaaaatttt ctcgtatttc gtttgtcatt tcttgagcag
     2701 tgcgaatgat attacgttgc ttaatcaagt ggtcatcgat atgttgaatg tatagcgaat
     2761 gtttattatc tataatcaaa tcaccatttt gtttcattgt atcaattagc tcttgcatag
     2821 gaaacagtac acgttttact ttaatcaaat ccgaacgtaa cttaaagaca ctatccatga
     2881 ccattttatt aaagcgatca tctacatggc ggtcttcaaa atgataaaca ctatcttcaa
     2941 gtgcatatac aaagttgaaa tatttatcaa ccatcatatc taaaattaat atgacgacat
     3001 ctgcacaatc taattctgca tctaatgtat tcatatactt atagactact ttatttaatg
     3061 attccaacgt ttgatgatga tatgttacta atacattgtc ttgtataaaa atatttagtg
     3121 ctattggtga atagtttgac cccataatac tatgaaatac taagtattga taatctttat
     3181 aagatttata tttagctcgt ggcataccgt taattgcatc atccacttct aaatcattaa
     3241 aattaaaatg tgctttaaac cattcatttt cttgttcatt cggttcatca aaatcatacc
     3301 aaacaatagt cgcatctttt ggtatctctt tgatatcatc aactacttta aacggttcat
     3361 atgtagtttg ataccgtatc gttaaagcca tcgatactcc ccctaaataa cgaattctct
     3421 attattttat catgaattaa ataacgtgta tgtcttaatt tattttagta tgatagtcac
     3481 taaggagatg gttattatca aacaactttt tacacatact caaaccgtaa catctgaatt
     3541 cattgaccat aacaatcata tgcatgatgc aaattataat atcattttta gtgacgtcgt
     3601 gaatcgtttt aattacagcc acggtctttc tttaaaagaa cgcgaaaatt tagcatatac
     3661 gctatttaca ctagaagaac atacgacata cctctcagaa ttgtctcttg gcgatgtatt
     3721 tactgttact ttatatattt atgattacga ttataagcgg ctgcatttat ttttaacatt
     3781 aactaaagaa gatggtacac tagcatcaac aaatgaagtt atgatgatgg gaattaatca
     3841 gcacacacgt cgttctgatg cttttcctga atcattttca acacaaatag cacactatta
     3901 taaaaatcaa ccaactatca cttggcctga acaattaggg cataaaatag caattccaca
     3961 caaaggagca ttaaaatgac agatgcatta caacaaaaga ttcatatcga attactagat
     4021 ttattagatg atgttaagtt tgaattaaca gaattaaatg cacaaaaagg gttatacatt
     4081 aacggaccag caaatcagct acttaagcgt ggcgtgcata tggcttatgt tcaaggacaa
     4141 aagcaagcca tcgataatat tatgactatt gtggaacagc agcttgaaga tcaacatttc
     4201 ctagaacatt atgataaatt tcaaaatgag gttgctcatc gcaattatga taaaacagct
     4261 aactttgcag aacttagtga tattccacgt caattcgata attttttaga tcaattttat
     4321 caaattaaag ggcaatactt tatcatcaca catatcaata cacttattgg tgattttcac
     4381 tcagaagctc attaacaatt agtctatata acccttgcta tattttcaaa aaaaaccaat
     4441 tacgttttca tgtcaaatat catcttgcat gaaatcgtaa ctggatcaat tgtatgttat
     4501 tagttatttt gtgttacatc ctcatctatc gatttggcaa tttgtttaat agctttatgt
     4561 gattgtctaa ttggataaat tggaaaatca tgtaccatct taggataatc ataaaactca
     4621 atgtattgat gatgttgcaa catcatttgt tcaaatagct tcatatcagg atgtgtcatt
     4681 tcacgtccac caccaaacat ataaactggt ggcaatcctt ctattgtgcc attaattggc
     4741 gatatgcgct tatctgttaa tggtaggcca ttcgcccatt ttttcataat ctcattgaca
     4801 ccaaactgac ttagaaccgc atcttgttcg attaaggcgt ccgaaatatc tttattagat
     4861 agtgttgcat ctaaaattgg tgagattaaa tacaatttat tcggtaatgg ctgttgatta
     4921 tctaaaagag attgtacaaa ggataatgcc agtgcaccac ctgaaccatc acccatgact
     4981 acgacatttt gatgtcctac ttcagatact aattgatcat aaacacgttg tatcgcttgg
     5041 aaagtatcgt caatatgaaa ctctggtgtc tttggataga taggcagtac aacctcatat
     5101 aatgtactta aagtgatttt atccaacaat ctccaatgga acggtgatgg ttgtagtgca
     5161 ttgaatccac cgtgaatata taaaattttc ttatcaattt gatgtctgaa attaaagcga
     5221 aagacttgca tatcatctaa tgataacttt tctaaatttg ctttaacatt taatgttgaa
     5281 ggctgcttat gtttttttct attttcaatt tttcttttat aaaaaaatct ttcaacatct
     5341 tgatcatttt taaacataat cgagcgattg tgaagcaaat atttattgac aacgctattc
     5401 ataacacggt ttctaatcaa tgtcttaacc tacctttata tattttatgt atccaatgat
     5461 tgtctatccc ctacattctt cgccaaaaaa agtatataat atagaagata ttttcttttt
     5521 cactttcaaa tttaagacta caattgaaca gtgatttttc atcattataa cagacaacta
     5581 gacatattga taagtaaaga aaagaacttt atacggaggt gccttgcatg acaaatccaa
     5641 atcaacgatt agaaccattt gatgagacat ttcaacaacc gaatattcat cgtggtaagc
     5701 gatatggtaa gaaaaaacgt tcattggtaa gcatgattat tcaaatcata gttgttatat
     5761 taaccgcaat cgctggatac agcatgtgga aacaacctat ttttaatatt gtcttcacca
     5821 aagaatctgt agattttgat ggcattaaaa attttaacga gacaattgga aaaatgcatc
     5881 aattaaatat taatttgggt aatatcaatg atttacaaca aggaatcgat cgcttaattt
     5941 tagtctttaa cggtttcttt attttatgta tcgttagcct agtcataaca atactgacaa
     6001 ttgtatttaa tcgcacagtt ctaaaagtag taaatatttt agtgttaaca attatgttag
     6061 tcattacatt gtatttcagt tatattatta aagcactcgc acaagaaatt gcagatgttt
     6121 ttaaaaaata ttatgtaaat gtaccaccag atcaagtgat aacagaagct gacgctattc
     6181 ataacggcat cattttactg ggctgtagca tcggtttact tgttataagc ttattcttcc
     6241 gtaatcgcat gcctcgttta aaataatgat atacagtagg gattgggaca gaaatgttat
     6301 tttcacaaaa ttcatttcgt tgacccactt cctgcttttt ctttattaat gacctactac
     6361 gtcaatgcca aattttaata taattcctct aacattctac aaatcaacaa ataaaaaaag
     6421 tatcgataac catatattgg caccgatact ttaaaaatca tgtccccaca acataatttt
     6481 tgattagtca cacttcaatt aatttatttt atttattcat gattgatact attatctgca
     6541 tctatctttt gagccgtagc tttggctttt ttgttgcttt gtaaaaataa acataaaatc
     6601 aaggcgatga cgctaaatat cgttgcaact ataaatgcat cattaattcc ttcaactgtt
     6661 gatagtttat ttacaaattg taataacact ttcattgctc cttcttgacc accatattgc
     6721 gatgctaatt cacgcatatg atcttgtaca acaggattcg ttttatctaa ctcttcccca
     6781 aaagctgata aatgttgtgt agtttgtgtt gtcattacag taaccaagat tgctgttcct
     6841 atagaaccag ctagttgacg catcgtattt aagaaggcat taccatggga ggcaagtcgt
     6901 ccgggcaacg cattaatagc tgctgttacc attggcatca taataaatgc cataccaaat
     6961 gaacgtagaa catagatgcc catgattgtc atatatggcg tatccatatt caatttagtt
     7021 aattcccacg ttgcgtaagt catgacagca ataccaaaaa tggctaaagg ttttaaacca
     7081 atcgtgtcta acaacttacc agcaaatggt cctagtagac ccataattag agaaccaggt
     7141 aataataaca atccggaatc taatgctgag aaaccacgta aattttgtaa gtacattggt
     7201 aataaaatca taccaccata caaactcatc attacaacca tattaattac tgttgttaat
     7261 gtaaatgttg gaaatttcaa tacttctaaa ttcaacattg gcgctttcat tcttaattct
     7321 cttattacaa atagaataat aaagataata ccaatcgcaa acattgtttc tatctcaaca
     7381 gaaccccagc ctttgttccc cgcttctgaa aagccgtata acaaagcacc gaaaccaatc
     7441 gtgctaaaaa tgatacctgg gatatcagct ttagggtttg tagtatattg atataactta
     7501 aaccatacaa aacctactaa gattgcaata attccgataa tgaacatacc gtaaaacatc
     7561 acattccaat ggtaattttg tacaatataa cctgataatg ttggaccgat tgcaggtgct
     7621 aaaatcattg cgatacccat tgtacccatg gcagcaccac gtttttcagg tggataaatt
     7681 gtaataataa caattgaacc taatggcatt agtacacctg caccaatggc ttgtaataca
     7741 cgtccaacca tcatgattgg gaaattcatt gaaatcgcac atattaatga accaattgta
     7801 aagagtacta acgcaactaa aaataatttt cgatatgaat atttattaaa tagatacgcc
     7861 gtaattggta ttaaaatacc gtttactaac atgaatcccg tcatcaacca ttgtcctgtt
     7921 gacgcagaaa tattaaattc cgtattaatt tttggcaaag caacatttaa taatgtttgg
     7981 tttaaaatcg caataaacat accgaataat aatgccgcta atattttacc gcgtgaaaca
     8041 ccttcaccaa aaataaagtt tttatgttct ttttttattt tttcatttac tttatattct
     8101 tctgatttag gatttttagc agcatatact tcttcatcag attcattatt atcagtgaat
     8161 gatgcttgat tttgttcaga tccctctgtc tgtttgttta gactaacttg attctgatta
     8221 tcttgattgt caatacgtgc ctcttcacgc gccgtatgtt gtgacgattg atcagttgtt
     8281 ctgtctaaat cacttgcttt aaatttagat tgatttgatt gacgtgtcgc aaaatgttgt
     8341 tccttttgtt ggcgttttgc ttttcttctt gatcttatta acaataaatt gataacccca
     8401 acaataatga gcgctaaaac aatgtagcta ataatgaagg tcgtagtcat ttaatgaccc
     8461 ccttaatttt tatgaatttt tacttcagcg ttcattccag gaacaacttg tttagacggt
     8521 tctgaatcta acgtaatttt aacaggtata acttgagata ctttagtata gttaccatca
     8581 ctatttgatg atggcattaa tgaaaagctt gcagcagtag cttttccaat actatcaact
     8641 ttacctttaa cagaagcttt ttgaccgtca atagtcacat caacatcttt accaacttca
     8701 acatctttaa tatctttttc gtcaatattt gcagttacat ataaatcatc taaattgtaa
     8761 gcataagcaa ttggattgcc tgcttgtacc atagaacctt ccatgccatc taatttagca
     8821 attgtacctt tttgtggcat tttaagttcc atatctttag tttcgccatc ttgaccttga
     8881 acagtaactg ttgctacttt atcaccttta tcaagtttgt caccttgctt aacgtttagt
     8941 gatttgattt gcccagaagc tggacttgct attttaattt gatcgccatt tactttagca
     9001 ttatcagttg tgatataact tgttgtttta ttccagaaat aaaaaccagc aatcccaatt
     9061 gctagcagta caacaaccgt aatgacatta attaatatca tctttttcat gaaacatttc
     9121 ctcctatttg cttttaaaat tcactttatt tattatagag acatgataac taaaaaaaca
     9181 ccaacaattt ttataagagt gttggttaaa tttcacaaag gtgtaacaat atgaaacgac
     9241 aagccaaaat agaaattcaa aacgcacttg ttgatttgat ggctgaatat ccttttcaag
     9301 aaatatccac taaaatgatt tgcgcgtatt gtaatattaa tcgttctact ttttatgatt
     9361 attacaaaga taaatttgat ttattggata ccatcaactc aaagcataaa gaaaaattcc
     9421 aatttcttct aagtgcgcta catcataatt tcgaaaatat taaacaagat aagcttaaac
     9481 tttataaatt cttcattatt attgctaagt atatcaagcg caatgagcag tttttcaaag
     9541 acattttagt tacctatcca atgaaaacat tattcataga ctatataaat ttagcgagag
     9601 attactatca acaaattatg aatgactata gtactacagt aaccaataaa cagctttatg
     9661 ttacatatat cataggcggt caagctgggg tgtttattaa ttggctttcg aatggttgta
     9721 atgaatcacc tgaagaagtt gctgacattt tattggctaa tacgattaaa cttcaaaacc
     9781 aataatacgg tttcattcta ataaagaaat gctataaaac aactagataa agttaaacca
     9841 aatggacaga taatagtaca tatgtaacgg tgctatcaat ataaaaatgc cgagatttcc
     9901 acataataat ctcggcattt ttatttttga tgctaaattc ataggtctat gaatagctca
     9961 agttttgttt tttaattttt caattcaata taatagaaga aactatgttt atcatcgatt
    10021 tgttttaaat accttcatat tataaatctg taaaataatt aatataactg ctgtagctat
    10081 aataataatt atgtaaggta taggattatc ttcacctttt acccccacta atggcgatgc
    10141 aataccacca aataaaaact gcactaaacc taataaactt gatgaactcc ctctaccact
    10201 actactttca tccatagcta ttgtaaaacc aagtgtcgca acacctgtca ctggtgctat
    10261 taaaatgata aatcctatcg ctaaaatcca aaagttccaa tgattaagca atacaatcgt
    10321 cactaaaatt acaccgataa tctgaatcat cgtcatgact ctcatcaatt tttgtgagtc
    10381 tataaaatca acaaggtagc cagtaagttg acttgatata atgagcgtaa taccaattcc
    10441 tgcaaacatc caactaaatt gtattgcagt catgccataa attttttgaa taataaacgg
    10501 agacgcagaa atataagtaa ataatattac aaatgtcata ccttgaatga gcattggtaa
    10561 tacaaaacgt ggcgtcttca ataatatttt gaagttttta aacattgtct ttaatccact
    10621 acttgattca cgatttgtca ctgttaatga ttcaggtact tttaataaag aacctatgac
    10681 cataacgaag ccaaagatag tcaaaatgac aaagaccata cgccagacag aataatttaa
    10741 aattatgcct cctattgttg gcgcaacaac tggtgcaata ccattaacaa gcatcaataa
    10801 tgccataaac ttagttagtt cattaccact atacatatca cttgctatag ctcttgaaat
    10861 aactgctgct gctccacctg tcactccttg aagaaatctt aatgcaatca tcagccaaat
    10921 attatgtaca aaaacaatac ctaaacttgc taatgtaaaa ataatcatag ctataataag
    10981 cggttttctg cgtccatttg aatctgaaat tggaccagca aacaaattac caaacgctaa
    11041 accaatcata aacatcgata atgttaattg tgcgttagac gtcgttgttt gaaaatcatg
    11101 tctaatatct ggtaatccag gcaaaaacat atctattgat aatgctccaa tggcagtcaa
    11161 agatcctaaa ataataataa atatcggtga acgcttatta aaacgcttta aatcattcac
    11221 tatatttcct cctttatata atgattagtt tataactatc acgaacagaa actaaattta
    11281 aatatgctct tttacatatt agcattactc acaagtttca taaacatcat tacaacttat
    11341 aaaaggtata aaatgatata aacctcagca ctccataaat tttttcacaa aaacaatccc
    11401 ttcaaagtaa ttcacactaa ttgtaaatac tttgaaagga tgttatttgt attccatgac
    11461 acatgcatct tatttaagtt ttacactcta tttttctgat gtcttgatta attgcaagcg
    11521 gtcttgcgaa ccttgttcaa gctcatattc tttatctact tgcttaccgt tttcatttat
    11581 taatcttacg gttgcggtaa tcttatcacc atgtttttcg gcatctataa tttgtggtga
    11641 actaatcatc attaaacttc ctttagatac acgcttcttt acatcatcat aaaaagatga
    11701 tccttttttt atatatgacg atacaaaatc aaaatccgac tgattaaacg cagcattatt
    11761 cgctaaagaa tatccagcaa agaattctat caatttgttc ttcaagctgt tttcttcttt
    11821 ttctttcttt tcaacatagt cttcgatatc ttcactgtca aaattcaaag ttatctctgt
    11881 attgtatttt aaatcgctag ctttaatcgt cttcgtctgt gttgtaaatg ttttatcttt
    11941 cgctttacca gaagctgaaa tggtaatatc tttattttgt ggatatggac catacgtttt
    12001 gaaacttgaa aatgccattt cacggtcatt tatagttact tttttagaac tatcatttaa
    12061 ttttgtatcg ccttttaaag ttacagttat atttgcttct tcaaaatctt cagtaacatc
    12121 taccgtttca gaattacttt gtctaaaatc aaattttaaa tggcctgcaa aatcaccgtt
    12181 ctcagttgat ttcatagctg gaattctata tgtccccggt ataaaattac ctattggcgt
    12241 cactttattt gcttcagcta taaccatttt tttcttacca ccagatttaa actcatattt
    12301 tgttttttct ttcggtttaa caattggttg cttggtaggt gcagtaaagc tcatattatc
    12361 gaaaaagata taacgagtgc catttttact tacacgtaat atattttgac cagatctggt
    12421 ttgaatataa gaagctacgc tggtcttact cttattcaat ttatgtaccg tatttttaag
    12481 gtcgctgaca aattgcttaa gcccaacttc atctttgata tagttaatgt atactttcgc
    12541 ttcttcagaa tctactttat tatctttagt acttaataat gttgctactt tttgtttatc
    12601 attattctca atcgcattca ctaatatttt agtttgcgct tcaggtgaat tgaagtttct
    12661 tagtaaaaag aacaatataa taattaagat taaaatgaaa aaaccaattg cccaaggcac
    12721 catttttctc atcttgatgt tattagtttg tatatcttca tcggttgact ttctatataa
    12781 tgcttgacga ctatcaaatt tatgtccaca ttgtgtacat atctgtacat catcttgtgc
    12841 ttgttgtccg cacttcgggc aagatttcat actttcacct caattctgtt cctcttcaat
    12901 tgttatatgt atatcacaaa aattatttca ttattttacc attattattt tacaaatatt
    12961 atcccaagaa tacaattcaa gaaatgatta actttacttt agaattgtac cttattacat
    13021 tatttatgaa agtactctct caattataac taaaaagaag gtgttcaata catacatatt
    13081 tagtcttata tttgaacacc ttcaaaaacc tatttatgat tgctatatgt tttaatgcga
    13141 tgattgatga cttctaatac ttgccttaca ttttcaatat cttcagaatt taaatcatta
    13201 gtaatatctt gcgcaatatc tgtcataatc gcattacgtt ctttcaaata tgctctacct
    13261 ttgtcagtta aggttatgaa tttcaaacgt tgatcaatat ttaaatttgg tttatctaac
    13321 ttaactaatt tagcatcgat taacttttta attcgtcggc ttactgcggc cttgtttaca
    13381 ccttgtcttt gcgtgatttc actaattgtc aaaggttctt tatttaacat acctaatacg
    13441 ttagactgct ctaatgaaat ttcatattca ttttgtaaat ctttcaacat ttttgcagtt
    13501 aatgcgttaa cgttatttat aaactgctct aaaaattgaa tatggtcttg taaatgtttt
    13561 accataatta tttctcccta attactattt ttataaagta tcctcagcaa tcattgtatc
    13621 gcacatctaa aaaacacaaa aatattgacc catatataat ataacaaatt aagacttaca
    13681 tgttgctacg ttctccttgc tttaataaat taaatcatct acatttatac ttaatattta
    13741 ttataagcga ggtgtcagta tgttattgaa tttattatta ttatttatac ttatcgttat
    13801 ttgtccgtta attttcaact atactctgac gttaaattta acatgctaca tcttagttgt
    13861 catatcgata tttttgtcac tcatctatag catcatgacc tatactttcc cttggtctat
    13921 gtttataaca tttataataa tcagtattat catgctattc aaacatagat atttattttc
    13981 tcatacttct agtcgcttat ttattaaaaa attattatct ttttcatata aatttgtact
    14041 ctacacatca gcacttctat ttataagtac gattcagtca cctattgtga aaggtttgtc
    14101 tatgtggtta gctatattat gcctttcctt gttactaacc tttatttgtt atctcgtttg
    14161 gacagtatca tatagacata gatcatacaa caaagaagtt gatatcataa ttgtgttagg
    14221 tgctggtatt tttaccgaat ttgtcacacc aatgcttgca gcgcgtttag accgtgcact
    14281 tgatatctat caacaacaag tatcagcaac aaagattatt gtatctggcg gacaaggacc
    14341 agacgaacca attcctgaag ctttagctat gcaacgctat ttgattgcac atggtgttga
    14401 taaaacagat atactaatgg aatctcactc tataaataca tacacaaact ttttatattc
    14461 taaacaaatc atcaacaatt tgtatcatga agcagttaaa attgtttgtg taacaagtca
    14521 gtttcatgta ttacgcgcct tacgactagc ccaaaaatta ggtttatcta tcgatggtgt
    14581 cggaagtcat acaccatatc actttttctt acatgtgctc attaaagatt atctaggcgt
    14641 aatgtatcag tatagattgt tattaacgtt atattgttca agtagctggt ttatatgtct
    14701 atacgctgct tttatttata atagttaacc cacaaataaa ctattattat aggttgtttc
    14761 taatattgcg tcaaactatc tttaaatatg cgttaatcct tgattagaca attgttatat
    14821 tgaaaataaa taaactaaag cacgtcatca ttttatataa tagtgacgtg cttttttgta
    14881 aacccaaatc gtattctgtt atctaacttt tatactacta tgtcttaaat cattaacatt
    14941 tagcgtcttt acgagccact aatcagttat tttgccatct tctaattcaa tcactcgatc
    15001 agcatattca aataatcttc gatcgtgtgt aatcataata ccaatcattt gttgttcttt
    15061 aatttgttga cgtatcatct caacaacttt tgttgctcta tcggcatcta aacttgctgt
    15121 gggctcatct gctaaaatga ttttcggatt attcataaat gctctcataa tcgcaacacg
    15181 ttgcttttca ccgccagata actgatgcgg atatacattc aagcgatctt ctaaaccaat
    15241 attttccaaa agttgtattg ctcttgttga actttgttgt ttggtcattc ccgcttcttg
    15301 gcctacgagc gtcaattgct ctatcacttt taaataagga actaaatgtg aagattgaaa
    15361 aataaaccca atatcttcca atcgtaaatc actaggacga tgctgtttat caaataatgg
    15421 cgcatcattg taaagcactg taccactcgt ttgacttaac aatccaccta atatcgttag
    15481 caatgttgtt ttcccagaac cagaggcacc atttaaaatg acaaattccc cttgttccac
    15541 ttcaaaatta atacctttta aaacttttgt ttcagacaaa ccttctccga aatttttgac
    15601 gatatcttta acaactaatg ccattattct gcacctccaa ttgcttcgat aggatccact
    15661 ttaaataatt tgacaaatga tagtgaggca cctaaaatcg ctactaatat aaatatcccc
    15721 accatcaata aaatattttg cgttgttaaa taaaaaggca tcgttacagg catcataaat
    15781 gatagtccta ctatgatgat cacagcaata cctaccccaa ttattgttag tgttaaaatt
    15841 tgtaaaacta acgcactcaa taaatgtctt gtcttaatac caattgcttt caaaatgccg
    15901 atttgtgata ttttttgaat cgtcataaca tagaaaaatg cacttagaac gattgctgta
    15961 atagcaaaca aactaacaat catcatattt aacggtgctt gctctgcttg ataactcgca
    16021 atattacctg ttaaatcttt ttcactcaca acttgaacgt catttatttt attaagctca
    16081 tcacgttgtt gttgcgttaa atttttcact ggataaaatg ccgtattaac cttattcaat
    16141 gcattaaatc cgttatcgtt caatagcaca atggaactat gcgcatacat tgtgtcgttt
    16201 aaaataccag aaactctata actagttgaa ttatttttaa aatgtaatct atccccgact
    16261 ctaatgttgt ctgcagctaa cttatcatta atagcgacct catgagcatt tttaggataa
    16321 tcaccttttt taagttgtat gcgttgttgt ttaacgtcat tcattgtaat cacatcttgt
    16381 tctttattag ataatttcaa tgtttgaata ttcattttat atggttcttg atgaattacc
    16441 tttttaattt gattctgttg cgtatcacta agttgcgatt tctcaatttg cggctctttc
    16501 attttttgaa caacatattc atcattatca aagtgttcaa ataacgaaat attctcccta
    16561 ccaagccctt gagctaaacc actaataaat aacaccataa tacttaataa aagaatgatt
    16621 aatgtgatta aaatataacg aaatttgtaa aacataatct cttttatcgc taatttcata
    16681 tcgattcact tctccctatt tcttctttag cgtcagtata aggttgaaat atgaactcaa
    16741 tatgaacaat tgttttttta cgcaaaaata ttttacatgt ataataaatg aaaaagataa
    16801 gggagtttat agctatggtg caatgtcttg ttgtcgatga cgatcctcgt atcctaaatt
    16861 atatagctag ccatttacaa acagagcaca ttgatgcata cacacaacca agtggtgaag
    16921 ctgcattaaa acttttagaa aaacagcgtg tcgatattgc agtggtagat attatgatgg
    16981 atggtatgga cggctttcaa ttatgtaata cattaaaaaa tgattatgat ataccagtta
    17041 ttatgttaac agcgcgggat gcacttagtg ataaagagcg tgcgtttata agtggtactg
    17101 acgattatgt aaccaaaccc tttgaggtta aggaacttat ttttagaatt cgtgcggtat
    17161 tacgtcgata taatatcaat tcaaattcag aaatgaccat tggcaactta acgctaaacc
    17221 aatcctattt ggaactccaa gtatctaata aaacgatgac gttaccgaac aaggaatttc
    17281 aattattatt tatgcttgca gcacgtccta agcaaatctt tactcgtgaa cagataatag
    17341 aaaaaatttg gggctatgat tatgaaggag atgaacgaac agttgacgtt catattaagc
    17401 gactacgcca aagattaaaa aaattaaatg ccacacttac aattgaaaca gtaagaggac
    17461 aaggctataa ggtggagaat catgtttaaa acactctatg ctagaattgc gatttattcc
    17521 attacggtta ttttatttag tgcattaata agttttgtat taacaaatgt ttactatcat
    17581 tataatttaa aagcatctaa tgacgcgaaa atcatgaaga cgcttaaaga agcaagacaa
    17641 tatgaacaat cagctaaacc aacgcacatt caacaatatt tcaaacattt agggcaaatg
    17701 aattaccaaa taatgaccgt tgatcaaaaa ggtcataaga cattttatgg ggagccgttt
    17761 agagaagata ctttatcaca aaatgctatt aacaacgtat taaataataa agattaccat
    17821 ggtattaaag ataaaccatt cgcattattc gtaactggat ttttcgacaa tgtaacagat
    17881 aatactgttg gtattaactt taagacaaaa gacggttcaa tagcagtatt catgcgccca
    17941 gatattggag aaacatttag cgagtttaga acattcttag ccgtcttgtt aatgttgtta
    18001 ttatttatct cgatttcatt agttatcgca tcaacctatt caatcattcg tccagtaaaa
    18061 aagttaaagc tagcgaccga acgcttaatt gatggtgatt ttgaaacacc tatcaaacaa
    18121 acacgcaaag atgaaattgg aacattacag tatcacttta ataagatgag agagtcattg
    18181 agacaagttg atcaaatgag gcagcatttt gtacaaaatg tatctcatga aatcaaaaca
    18241 ccattaacac atattcatca tttattaagc gagttacaac aaacttctga taaaacatta
    18301 cgacaacaat atataaatga tatttatacc attacaacgc aactgagcgg attaacaact
    18361 gaattgttgc tcttatccga attagataat caccaacatt tattattcga tgataagatt
    18421 caagtcgatc aactcattaa agatattatt cgacatgaac aattttctgc tgatgaaaag
    18481 tcgttaatca ttttagctga cctagaatca atcgatttcc taggaaatca acgtttgtta
    18541 catcaagcat taagtaattt attaataaat gctattaagt atacagatgt tggtggtgcc
    18601 attgacatcg ctttgcaaca tagtcacaac aacatcattt tcacaataag taatgatggt
    18661 tcaccaatta gtccacaagc tgaagcacgt ttatttgaac gtttttataa agtgagcaaa
    18721 catgataata gcaatggttt aggtcttgca attacaaaat ccatcattga attgcatcat
    18781 ggtacaatcc aattcacaca aagtaacgag tatgtaacca cctttactat tacactgcca
    18841 aataattcac attaatctct acctcctgaa aaaacatttc tgtttttatt acaggaggta
    18901 tcttttatat taattaacgc tttctagcca cttaacattt aatttctacc attcaacaaa
    18961 atttaaatat atcgatggtc atttatggtt taataatttt gaaggaggca ttaacctatg
    19021 atgaaactca atttatttat caatgcaact gagacggaat cttatattga tatacatgca
    19081 cctaaaatga atgatcacgt tcaaagtatt attaatgcag tcaatgattt agacaaatca
    19141 catacattag tcggatacat agacaaagaa atccatatca ttaatgtatc agatgttata
    19201 acattccaag ttattaataa aaatgtaaca gccattacaa gcaatcaaaa attcaaacta
    19261 aaattacgac tttatgaact agaaaaacag ttaccacaac atttcattcg tatttccaaa
    19321 tcagaaatcg tcaacaagta ttacattgaa aaattattat tagagccaaa tggacttata
    19381 cgtatgtatc ttaaagatgc acactacacc tattcttcta gacgttattt aaaatctata
    19441 aaggagcgct tatcaatatg aaaaatttga aaaactcatt atttattagc ttaatcattg
    19501 gtttgtccct ttcactgttc tttagtatgt tatttgcaga cggcaaatat tatccactga
    19561 acccacaatc aactattggc atattgtatt ataatcattt cacagaaact accgtaatgt
    19621 tgatttctat cattttatgg ttactcatag gcgtcgtctt tttccttgga gattttatct
    19681 ttaaatacac agattggggc attactaaag caactatagt gcatttcata acaacgtatg
    19741 tcggattctt acctttagca atacttgccg gttggtttcc actaacaata aattccctaa
    19801 tcatatttac aattatcttt attgtggttt acacattgat ttggattatt caattcttta
    19861 aaaacaagaa ctacgtagac actattaacg agcaactgaa acaattaaaa tgatttttat
    19921 taaaattata aaagctatac attgcattaa agtagtctct tctgcaatgt atagctttat
    19981 gttgtattta ttttaaatac gcatgaactg aataatatgt ttttactatt ttcaaattaa
    20041 attgtaactg caactgtcct ttacaacatc aacttatcat gataaaaacc taacgaaatg
    20101 cattttcaaa tattttattc ataatttctg ctacttcttt aggactctct ttatatcctc
    20161 gtttgaccca atcttgtaac acaccaatga ttgcattact cataaaaata agtaaaaaat
    20221 acttttcctt cgtcgttaac atttttgtat ttaatactgg tacaacatta atttcgatac
    20281 gttgttgtag tgattttttt atgacttgat gtaatttata agcactctca tcacctaata
    20341 acatcaatat gagctgtcct tcacttagcc aataataaat catcctttta aaaaatactg
    20401 cttgtgtcat aggcctctct ttaatgaact tctttttagc aacttttaac aatgtattaa
    20461 gatagctgta tataaaatca tctttagttt tgtaatgtgt ataaaaggtt gtccgactta
    20521 tttgactctt ttcacatata tctttaacag ttatatcatt atatgccttc atttttaata
    20581 gatttaccat tccatcatgt atgcgattta tcgttttcgt tacacgacta tccgtaaaag
    20641 ctgtttgatc catatgcccc accttttttc tgaacactaa aagcaaatat gttcactatc
    20701 tgttaatatt ttattcgcaa tcttaatata cgcttaagat gatatataaa taaagtgaaa
    20761 tgtatctcaa tttaggaggg gttgtcatgg acgcaactat agcgaagttg gataaagttg
    20821 taaaaacgta taacaagcat cacgtattaa acgaaattag tatgtcaatc aataaaggtg
    20881 aactgctagg gttaataggt cctagtggtt ctggtaaaac aacaacaata aagtgtttac
    20941 taggtatgga aaaagtagat tcgggatctg cagaaatttt cgctcataag atgcctaatc
    21001 gcaaagcttt aaatcgatta ggctatatgg ggcaaactga tgcattatac gaaaacttaa
    21061 ctgcttatga aaacctagag ttttacggtc gtttgtcagg actgaaagga aatgtattaa
    21121 aagataatat tgaaaaaaat atcgttctag tgaatttaga gcaagcgtta aataaaaaag
    21181 ttgcacagtt ttcaggaggc atgaaacgcc gattatcttt agcaataaca ttgttggccg
    21241 aaccagaatt aatcatatta gatgaaccaa ctgtaggcat tgaccctaaa ttgcgccaac
    21301 aaatatggca acaattcaag caaatgacca aagacggaaa gagtgtcgtc atcacaacac
    21361 atgttatgga tgaggcggaa cgttgcgata aagttggact tattgtcgac ggaagaatat
    21421 ttgctataga tacgccaacc aatttaaaac aaagatttaa tgtagataca attgaagcgg
    21481 tatttattaa agctgaggag gttcgtcaat catgaaaatt ttagctattg ttaaacgggt
    21541 attaaaagaa atgttacgtg ataaacgtac tcttgcgctg atgtttctag caccaatttt
    21601 aatattgacg cttatgtatt ttatttttaa cggtgatgaa aacgatttga aaatcggtat
    21661 cgatacatct gtttcatcaa atataacaaa acaattgcca tcatccgaca taaaaactca
    21721 aacgttccat tctcatgaaa atatcagatc taaaatcgag aataatcatc ttgatggtta
    21781 tatttaccaa gaaaatcaaa cattacatgt catttataca aatgaagacc ctaacaaatc
    21841 taatatgatc aaacaaatga ttggcaaagc tatacaacaa gataaaataa gcagtataaa
    21901 gcatctaatt gaaaaagcac ctccgaccat gaaagcacca aacaaacaag atattaagat
    21961 ttcgcattcc tatttatacg gtaattctga tagtacttat ttcgataaaa tgtttccaat
    22021 actaatgggc ttctttgtat ttttatttgt atttctaatt tcaggtatag ctttattacg
    22081 tgaacgtaca acaggtacgt tagaacgtgt attatcaact tcaattcgtc gaagtgaaat
    22141 cgtccttggt tatctgattg gctatggtat attcgcaatc attcaaacat taatcatagt
    22201 cctattttca atatatttat tgaacattaa tttagcaggt agcttatggt atgtaatttt
    22261 gattaatatt tgtttagcta ttacagcatt atctatgggg attttcattt caacgtttgc
    22321 taattctgag tttcaaatga ttcaatttat tccactagtt gctgtacctc aggtattctt
    22381 ttcaggaatt ttcccacttg aaaatatgcc tgattggcta ggtaacatcg gctatctctt
    22441 ccctcttcga tatgctggtg atgctttaac taatattatg ataaaggggc aaggttggag
    22501 taatatatgg ttcgatttac taattctaat gatttttatc atagtcttta ttatcttaaa
    22561 tattgttggt ttaaaacgat acagacaggt ataaatgcta caaaactttt aaatgacttc
    22621 aatcaagata agcttctaaa tataaagcac tgataataaa aacaaccact aaaaaacggt
    22681 aatgtctatc gcattaaaaa agacattacc gtttcgttta ttatttaact tgtaaatact
    22741 tagttacttc ttcattaatt ttgtgatata aatcctcatg atctgttaag cgataaccaa
    22801 atgacggcac catttcttta atctttggtt cccatccttt gaattcatca cgatagcatc
    22861 gctgtaaaac atcaaacata atatctacag ctgttgacgc accaggtgat gcaccaagta
    22921 atgcagctaa tgtgccatca tctgacgtaa tgacttcggt accaaattgt aagttacctt
    22981 tagaatcctc agtatccttg attacttgga cacgttgccc tgctgtaatc acttcccaat
    23041 cttcattttt agcatttggg aaaaagactc ttaaatcatc catacgctca tcattagata
    23101 acatcaattg tgacactaaa tacttcgtaa gactcatttc tttgatacct gcagataaca
    23161 tcgtcacgat attatttggt ttaaccgatt taattaaatc catatgtgaa cctgttttta
    23221 aaaatttagg tgagaaacct gcaaatggac caaataacaa tgaacgcttg ccgtctacaa
    23281 aacgtgtatc taagtgcggc actgacattg gtggcgcacc cactgctgct tttccgtaca
    23341 ctttagcatg atgacgatca atcacttctt gatttgtaca gcgcaggaat aatccactta
    23401 ccgggaaacc accaatatgt tttgattgtt taattccagt cttttggagt aatggtaaac
    23461 tcgcaccgcc agcaccaata aatacaaaat cagattcata tgttgtcgtt tcgttagttt
    23521 ctaaatcttt aactttaact agccatgccc ctgatttctg tttcttgatg tctaatacat
    23581 tctgcttata ttgaatttcc acaccacgtt gttctaaatt atcaaataac tttgcagtta
    23641 acgcaccaaa gttaacatct gtaccagttt catcataagt taaagcaatt ggttcatcag
    23701 acttacgacc ttcaatcatt aacggtaccc aagatttcat ttcttcttca tcttgcgata
    23761 atttcatttt ttcgaataaa acacttttct ttaacgttgc aacacgactt tttataaaag
    23821 ctacattatc ttcgccaatg acaaaactca tgtgtggcac cgcttgaata aagcgatctg
    23881 ggttatctaa ttgtcctgtt ttaactaaat atgcccaaaa ctgctttgaa atttggtact
    23941 gctcatttat cttaattgct ttactacaat caactgtgcc atccttacct tcttttgtat
    24001 agttcaactc gcaaagtgct gaatgccctg taccggcatt attccataca tttgaactct
    24061 cttcgccagg ttgtgctaat ttttcaaaca ctttaatatt tttctcaggt gataattctt
    24121 taagtaatgt tcctaatgtt gcactcataa taccgccacc aattaagatg acatctgttt
    24181 tgctatgttg tgttgtcata acaaatacag tccccctttt taaaatgaat aatggaacgt
    24241 tcgacaaata cgacatatta ataccacttt gaatcaataa gtgtctcaat aggctcccat
    24301 agtgatgctc tattactatc tactatgtat attaatattt tataataacg aaactacttt
    24361 aattatatac tttatgtgcg atagcacaaa gacaaaacca caaaccttaa cagctatcaa
    24421 ccaatttaat ttgattgctg attactcact cttcatttta acataaagct ctaccattat
    24481 tataatgtca aacttctttc attaataatc cattaaaaaa agatgagatg ttagaaaaca
    24541 tctcaccctc tgtatattta tattttgaaa tacgtttttt tatagtaatg acaagatgaa
    24601 agtccaaata cagatgaata ttagtaaaca tacactgtat ttcaatgtca tttttaataa
    24661 ttctgattcc ttaccaactt gttttactgc tgcagttgca attgcaattg attgtggtga
    24721 aatcaatttt gccgctacac caccaactgt attagcagat acaagaagtg aaccacttgt
    24781 tccaatttgt tgtgcaacag aagcttgaat tggtgcaaat aatgagttgt tatttacaac
    24841 tgatcctgtc ataaacacac ctatccaacc taagattggt gatagaactg ggaagacatt
    24901 acctgcttta gcaatacctt gacccattgc tgcacttaaa ccaccataag ttgtgatttt
    24961 agaaattgct aagatgaaac aaattgtaag gactggtaac cataattctt taaatgtaac
    25021 accgaataat ctacctgcat ctttaaagtt aaccttttta gacattaaaa ttgtaataat
    25081 aatagttaat aaaatagctg tacctgtttg tccaataata tttaaagtca aaactaatgg
    25141 tttatgtgta acttcactga ctgttccagg taagttgtat ttaaatacta atgatgataa
    25201 agcaccattt ggtaagaata agtttttaaa gaatggcgca ctccaaatca ttacaatgac
    25261 tgttaataca atgaatggac tccatgcatg taatactgct tttgcagaat gtgcttttgc
    25321 aggttcaatt tcttcatctt tattaacacg ataaatgtgt tttggttgga attttttaga
    25381 aaatactgct aatgctaaca ttgttaataa cggtggaata atatctgcta attcaggtcc
    25441 actgaatact gttaataatc cttgagtaag tgtataagtg attgaaacta ctaaaattgc
    25501 tggtaatgtt tctttaacac ctctaaaacc atcaataata aagataagta agaatggaat
    25561 aatgaaattt atgattgcca atgttaaagt tgctgattga gaaacaccta atactgaaac
    25621 atctccaggt aatttcaacg tttctacaac acctacaggg ataccaatcg caccaaaagc
    25681 accagacgct gcatttgcga ctaaacataa catcgcagct tttaatggat taaatcctaa
    25741 ttgtgttaat aaaagtgcac aaattgcaat tggtacacca aatcctgctg caccttctaa
    25801 aaatgcgttg aatgcaaatc caataagtaa aacttgaata cgttggtctt gtgaaatatt
    25861 tgtaatacta tcttgaattg ttaaaaattg tccagattca acagtaattt tgtataacaa
    25921 tactgccatc ataacgatat agccaatcgg aatgatacct tggaagaaac cttcgactac
    25981 tgcaccagaa gcgataccaa ctggcaattt gaaaaatggt attgcaatta gtaatgttac
    26041 aacaagtgtt gtaatggctg cataaatacc tttcatttta aaaacagtta aacatagtaa
    26101 aaacagtaca atcggtattg ctgcaattaa agacgataat aataaattat caaatgggtt
    26161 aaacgtattt actaacatag gctgactctt ctttccataa agtagtagtg taattacttc
    26221 attaaaatca tgctctggct atagcatttt gttatcgata acattttaca gaacagtgag
    26281 attaatgtga tttttttcac aattaaaata taccattttt tcagactatt aacaatatca
    26341 ctttcctatt taattgtttt atttttcatt ttaaatctgt tcatcaaaat gaattgtact
    26401 taatgtaatg aagtaactta tactattcat gaattttaca taagaccgtg ctaaaataag
    26461 gaagatacta cgatgagaaa tggaagttat agcaatgatt aaacagataa atgtttctaa
    26521 tatgcaaaag tttgaatctc aattaatgaa agctcagtct gaaggttata cacatgtcgt
    26581 tccatatgcc aatgagataa tgatttatca atctatgtta gatgcggttc aattatatcc
    26641 taagtctatc gtggttgatt atactgtgga tggacaatac aaaaatgatt gtcactattt
    26701 cggtcaatca acgatcaaca ttgccgattg ggctcaaaac aataattact atcctaacct
    26761 gatatatgcg attcaacaga ctcttgattt aatacattat tactctgtag aaacgatttt
    26821 cgatttagct ttattgacac ttctgaaagg tgatttatca atcgatggtc atgtcgtttt
    26881 tgattttaaa gcccctttag caacaagtgc ttcaatatgg gaaactatta aaactattga
    26941 agattttgat atgatgtctc agttttattt gaataaaatg gcttatattg atcatcatcc
    27001 tatacctttt cgcaaccttt ttatcgagga ttcagaacaa cttaattcgc cagataattg
    27061 gttgtattct accaagttta tgctacctaa atggttatac aaaatagcaa agcaacgtgc
    27121 tgataacaaa caattacaaa acttcggctt gtatacgaag caaccaaacg ttttaaaaga
    27181 tcacatcgtt tttatcggtg atcatcatca atatataggt aattcaaaat atttatttac
    27241 ttacttcgtt aaacataatc caatgactgc ctgttatttt gttactgacg atcgtcgcgg
    27301 accacatttc atatcaccta agtctgaaaa agctgacgaa ttgattaaca gcgcacgcgt
    27361 agttttagtt gaaaatgata tacctgaaac gttacaacca aacggtactt taattcaatt
    27421 acatcaaggc acaccaataa tgcaattatt tttagatagt aaagagccta ttaaaaatat
    27481 agaaacacct ttttatcgtg ctaaaaggta taatcgctgg ttgcaattcg attatgttat
    27541 acattctgct gatgatatta gccactttta tcaaacggct tttcctagtc accaagcaaa
    27601 tgtattggct tacggtaatc ctaagcacca atatttacta caaaagcgta acgaaagtac
    27661 tactcaacaa cagtataaga aatcgtttaa aataaatgat caaaaaccag ttttattata
    27721 cgcacctatt ggattagtga gtgcgcaaca attaccacta tcagatgctt tattcaaagc
    27781 ctatcatgtt gtggttcagg gtattgatga aacgatgtta ccagaagagg cgattgttgc
    27841 accaaaatat cttagtgctc aagacttaat tctaatgtct gatgtcgtta tcactgatta
    27901 ctcaaatata atatttgatg cgatggctat agacaaatca gtagcattat acactccaaa
    27961 tcacagtcaa tatattgagt ctcaaggtgt taacgaagat atttggcgtc atctatcaaa
    28021 aatttggtat acagaccgac aattattaat taataattta atttcccagg caataccagt
    28081 gattaaatat ccacaaatac aacataaaga acaaccatta gaatctattt cacaacttat
    28141 attgtctaag atgacatcta atcaatagtg tttaaattca tcagtggctg tgaatgaggt
    28201 ttaaaagtac tataaaacgt aaacttttat actttaaaat acgcaaaaaa aacggtaaac
    28261 cctaattcat attatagagt ttaccgtttt aattttttaa cttgcatcat aattacatta
    28321 acattattgt tggtagtttg gatcagtaac cattgcttgt ccagtataat caaccgttac
    28381 aattgaatat tttccatttg catttgggtc tttaaaacta aacacatact tataattacc
    28441 attatgttct tcaatagagt agtcattata cactttatta ttactaccaa atttatttgc
    28501 ttcattatta gccgcattta aagctgtttg gaaatttggc aattgctgta aagcttgagt
    28561 tttatttcca ttaaacggat aaatttgacg tgcaaccggc gcggcatttt gtccataata
    28621 tggtgcaacg taacttgatt tttgattatt attcgcttga ttattacttg attggttatt
    28681 atttgtttgg ttttggtcat tgtttgttgc atttgaatta gattgttgct ggttatcgtt
    28741 tgcactatta tctttattat ctttgtttac gtcattacta tcatctttat tgtctttctt
    28801 atctttagat gaatcatttg tttttttatc ttgttgttca gttttcgctt tatcatcttt
    28861 ttctttatta ctgtcttttt gttggtcact atcttgacca catgcagcta aaaataatga
    28921 taatgctagt aaccctgtaa ctaatctttt catacatatc tcctcctata attcgatatt
    28981 cattgaataa gcttgaaata catatctacc atgtgtatct tttcatggct tgttaccaaa
    29041 gacgtcaaca ttaatatgat ctgaattatc acaatatcca taactacaat ctaaggttct
    29101 ttttattata ccctaatttt tgttcattat tatttaattt ttgtgaattt tatgttttct
    29161 ataaatttaa ttattttact tcaacaattc attacgcatt tagcatttca aggcatacac
    29221 aatatttatt actatgattt cattttatct gctgcaaaaa caatcattat aactcttttt
    29281 ccataattaa atctgtatcc gttacatcac ctgtttgaaa atgatgttca ccaaccactt
    29341 taaatccatg acgtttataa aatgcttgag cacgaggatt atgctcccaa actcctagcc
    29401 aaattttatg tttattatgt tcttgtgcaa ttttttcggc caattctatc aattgtgaac
    29461 ctcttccgcc accttgaaag tctttcaaaa aatatatgcg ctgtacttct aaataggttt
    29521 cccccatttc ttcagtttga gcactattaa tattcatctt tatataacca acattcgcac
    29581 catcttcttg ataaaaataa tgaaatgaat ctacatggtt aatctcttgt gtaaattttt
    29641 ctacagtata attgtcttta aaaaattgat caaaatcttt gtcatcatag taagaaccaa
    29701 acgtgtcata aaatgttcta gttgctaatt caactaattc accagcatct tgttttgaaa
    29761 tttctttgat tatcccagcc atataaatcc tccaataaac agtgatcgaa tcaaaatatt
    29821 acttatgtta tttttcagcc aaaactattt aaaaatacat taacacaaat caattacaaa
    29881 ttgtattgat tgtgtgtaac atcaataaat gatacattta ttccagtaaa atggccgtat
    29941 tttcaaaaga gaaaaagaga ggatgtatcg ttgtgataga aacatttaaa gcgtttgtaa
    30001 ttgataaaga tgagagcggt aaagtgacac caactttcaa acaattatcg cctactgatt
    30061 tacctaaagg agatgtgctg attaaagtac attactctgg tataaattat aaagatgctt
    30121 tagcgactca agatcataat gcagtcgtaa aatcgtatcc tatgattcca ggaatagatt
    30181 tagctggaac aattgttgaa tccgaagcac caggatttga aaaaggagaa caagtaattg
    30241 taacgagtta tgacctaggt gttagccatt atggcggttt tagtgaatat gcgcgtgtaa
    30301 aatcagaatg gattatcaag cttcctgata ctttaacatt agaagaatca atgatatatg
    30361 gcacagctgg ttatactgcc ggtttagcaa ttgaaagact tgaaaaagtt ggaatgaata
    30421 ttgaagatgg tcctgtactc gttcgcggtg cttcaggtgg tgtcggtact ttagcagtac
    30481 tcatgcttaa tgaacttggt tataaagtta tcgcaagtac aggtaaacaa gatgttagcg
    30541 atcaattact tgaacttggt gccaaagaag ttatcgatcg acttcctgtt gaagatgatc
    30601 ataaaaagcc actcgcatca tcaacttggc aagcttgtgt agaccctgtt ggtggcgaag
    30661 gtattaatta tgttacaaag cgtttaaatc atagtgggtc aattgcagtt attggtatga
    30721 ctgccggtaa tacttatact aattctgtat tccctcacat tttaagaggt gtaaacattt
    30781 taggaattga ctcggtattt actgctatga aattaagaca gcgcgtttgg cgtcgtctcg
    30841 caaaagattt aatgcctgaa aatttacatg agatcaagca agttattaca tttgatgaac
    30901 ttccagaaca acttaacaaa gtaattaaac atgaaaataa aggccgcatt gttatcgatt
    30961 tcggtgtaga taaatagtat tcatgaaaaa gacatcccgt tatgcgagat gtctttttat
    31021 ttgttgtgga ttattaaatt tccgatactt catcaattaa cattttactt tagtgtattt
    31081 tggaaagcca tgtattttca gcacctatca tacctacaca ttaagcaaaa taaatgttga
    31141 ttcgtttaca attcatattt aatttctctt tctatataca tcaaaggcat atattgccca
    31201 ataaacgact gtgaatgcac aactatacaa aataactctc tcaatatttg ttaaaaataa
    31261 atagatcatt aaagctgata acacaagtgc aacaaaataa tatattatag cttgtcttaa
    31321 tgtatcgatt ttcattgttc taactccctt agttacaaag tcgaaaattc tatatcatat
    31381 caacttgaac tttaccataa aacacacatt tttttaatat cattacttag aaaaacaaaa
    31441 acatactaag ttaagctgtg tagaaaactc agtatgttta tcggtacgat ttttcatttt
    31501 taaaatttga tatacatacc gcctgaatct ggttcggtag gcataaatcc aaattttgta
    31561 tataatttat ccgctgggta gtctgcgatc agactaacgt atgcactttc gacagataca
    31621 tttttaatat acttcataat atgttccata atttgactgc cgtaaccttg accttggtaa
    31681 cttttcaaaa ctgcaatatc aacaatttga aaaacagttc ctccatcgcc aatcactcta
    31741 cccataccaa ttaaccgatc ttcatcatac aaggttactg taaataaggc attaggtaat
    31801 cctttttcag ctgcttcgcg cgtctttgga ctcatacctg cattaatcct taatgcgcaa
    31861 taatcctcgc aagtcggaat atcatatgtc actttaacca ttatttaccc cacttttcat
    31921 cacacaatat atcaaactag tataaatgtt tatttacaat agtcttattc gcttctttaa
    31981 acacttcatg atgacttgaa acataaccct ctgcattcgc atctggttgg atatatgttt
    32041 tagcaaggtt cgctgcattt gcaccatcac taaatgcact tgcaattaga tgtgattttg
    32101 catcatgata aacaatatct ccacacgcat agataccagg tatactagtt gtcgtattac
    32161 caaatccttt aacacgacaa tcatcatgca tatctagctt tgaagatgtt tcactcaata
    32221 atgtattaca acgatcaaaa ccatgactaa taatgacatc gtcaaattta actgtatgcg
    32281 tatcaccact ttcaacatgt tccaaaacaa cttcacttat atgcgtttca tcatcattgc
    32341 cgaccaagta tttaatacgt gttttcgggc atagtttcac atttaaatct gtcaccagtg
    32401 ttttcatcgc ttcatgacca cttacatctt cttttcgata aacaactgtc acgcttttag
    32461 caatcttggc aatatcatgc gcccaatcta atgctgtatt tcctccacct gatattaata
    32521 catctttatc tttaaaacgt ctgtaacttt gtacaacata atgtaaatta gttaattgat
    32581 atctctctac acctttaaca tctaattgtt ttggattaat aatacccgca ccaattgcaa
    32641 tgataactgc tttcgatgta tatatttctc ccgcttctgt ttcaacttcg aaatgacgtt
    32701 ctgccttttt cctaatatct accacacgtt cattcaaatg aacttccggt ttaaaatata
    32761 atccttgctt aattgtatct tttaaaattt catgacaagg ttttggggca atgccgccaa
    32821 tatcccaaat aattttttca gggtaaattc tcatcttacc ccctaattca gattgaacat
    32881 ctattaatct tacagacata tctcgcaatc cagcataaaa gcttgcatac aaaccagacg
    32941 gaccgccacc aatgattgta acgtctttca ttatgtgcct cctatgactc tctatattca
    33001 tttctttcat taacgcgctc aaattgataa ttattatcat ttaaagacat tatactatta
    33061 atatttatat tgttaaaata aatcgcatag ttagccatga attatcaata actatcccat
    33121 cacaatataa aaacacacct ttcaaagtac gaaacaacaa tgttcctttg aaagatgtgt
    33181 atatttttta gtactagtta tattattttt taaaagactc atcacgtggt tctttaagaa
    33241 ttgcttgtct taaaaggaaa aatagcaaca ataaacctgc aagcatacct gtgtgcccaa
    33301 tacctgcaaa gcctgcaaat gcttctggag agtatgattt accagtgact tggaagaatc
    33361 cttttgtcac catcatacct atagtaacga taacacctat gttatataca tagaagaacc
    33421 agttaaataa gtagtaactt gataatttaa ataacttctc caatggtaat aatattaaaa
    33481 acataaacat acctaaaata agtgtatgtg tgtgtacaag tgataattgt gttgtaccag
    33541 taaaatcata tgcttttgtt agctctctat agaaaaatcc actaaataaa cctatgatca
    33601 tataaaaaag aaatgaatat aataacctac gcattttgaa tcctccctca ccttttcatt
    33661 atatccgatt atacctatta taacagtgac aaaaaagcga agatatgaca caactgaatt
    33721 tggtttagca catagtatga cagctaaaat aactttacat caagtactat acaaataaaa
    33781 tagctatacc atgacgctcg ctacaaacgt cttgtatagc tatattccta tttattaaat
    33841 tatgacggca cttcagtacg ttttgtgcta tgttttctaa caatagctga aactaaactt
    33901 gatacagcgc caaaaatcat aaaccctata aacatccaca ttgtactatt taattcaatt
    33961 tgatgattca agtataatag ttctcttaca cttgttgcat agtgtgtgaa tggattccaa
    34021 tcatatacat atttttgata actttcgggc aacatttgtt taggtaacgt tacaagttgc
    34081 atactaaaga acattaaaat gaagaaaatt ggaattgact tcatacctag ccataccata
    34141 acacctaaaa taagacccac gaaaccaaga atcgcaagtg ctacaaaaat tgcgatacga
    34201 tttggatggt caaaatcaaa tccttgaacg ccttgcatga aataaatata aacgaagcta
    34261 cctgcaaatg ctgcaacaac tgcaaatatc atttgtccaa ttgaagcaat gatacgatgt
    34321 tgcacgacga tattgttact agttctaaat gcaaagaaca ataagataga cgttacgatt
    34381 gaacctatcc aaattggcat aaacattagg aatggtgcat taccacctgc ttggtgatct
    34441 ttaactttat taagtttttc attatccact tttactggat tcgtcaaacc attgatgtcc
    34501 gcggcattga ctttaacatt ttgactcgtt aatgtttcca aactttgctt cgtaatttga
    34561 gcattaatat tatcacccat accagttaac acagctgatg caatttgtga accttgtaag
    34621 cttgatcctt cacttacaat cgttttaaat ttagcctgct taacctctac ttgttgattc
    34681 cccatttttt gtttcatttg ttgaaccact tgtggcggaa tttcacctga agcaactttt
    34741 tgttgcattt cttctttttt actatccata actacttttt gtgttttact catagcatct
    34801 tttgaaaagt ctttatcaat aatagctact ccaaagattt tttgatcttt caaatctttt
    34861 tcaaggtctt tttcactatc aaccttaacc catttaattt tattagaatc actatctaat
    34921 aatttatcct ctaatttttt accaatgtta acatttttat cttgaatcgt tgtacctttg
    34981 tcctcgttta atataccaat tggtaaatct ttcggtttag gattatatgc aggataaaaa
    35041 gctaaagaaa agattaccaa gataatcata gttgctattg gtgcaatcca taataattta
    35101 ttttgaaata tattcatttt attaattacc tccttattag acaatgtgtt gaatatttcg
    35161 catgttgtct attataatat gtaagtggga ataaacaata cacaatgttc atcaatacgt
    35221 ttattaatag acaaatacac ccacattgtt caataacaca aggaggttga tttatttttg
    35281 aaagaagata ggcgaattag aaagacaaag tcctccatta aacaagcgtt cactaaatta
    35341 ctacaagaaa aagatttaga aaagattacc attcgcgaca taacaacacg cgctgatatc
    35401 aatagaggga cattttactt acattacgag gataaatata tgttactcgc agatatggaa
    35461 gatgagtata tttcagaact aacgacatat actcaatttg atttgttacg cggttcttca
    35521 attgaagaca ttgcgaatac ttttgtaaat gatatactca aaaatatttt ccagcatatt
    35581 catgataatt tagagtttta tcatactatt ttacaattgg aacgcacgag tcaattagaa
    35641 ttgaaaatca acgaacatat taaaaataat atgcaacgtt atattagtat caatcattct
    35701 atcggaggca ttccagagat gtatttttac agttacgttt ccggagcaac aatttcaatt
    35761 attaaatact gggtaatgga caaacagccc atttcagttg atgaattagc taaacatgtg
    35821 cataatattg tttttaatgg tccattaaga ataatggcag aaaaccgttt gcataaatca
    35881 aaccttgatt cactaactta agtaatactc gcttttccta aatcctttag aaaggaacta
    35941 tatatcatga ttacttcatt cagacattct gaagatatag ataaacatat tataaaaaca
    36001 ccattagatc atacagcgtc atggattaat gtagtagaac cagaccgaga agaaattgaa
    36061 aatcttatgg aacaatataa tatacctgaa gactttatac gtgacccttt ggactcagaa
    36121 gaaagttccc gtattgaata tgacgaagat actggttact cattaatcat tattgattta
    36181 cctatcgtca attcaactaa tcgtagcgtt ctatcttttg taacgattcc attaggcatt
    36241 attattggca acggtattat cgtaacagtt tgtgacgctg aaaatgaatt tttagaaaat
    36301 ttacctaagc gtgatattaa tttaaaattt cacagcagat ttgcattaga aattttaact
    36361 actattgccg accattataa tcgtaactta cgattactta ataaaagtag aattcgtatt
    36421 gagaaagaac taaaaaataa cattactaac aaacaacttt tcaaattaat ggaagttgaa
    36481 aaaagtttag tatacttttt agctgcctta aaaggtaacg atacaattat taaaaagtta
    36541 ttccgtttac ctgcaattaa acgttttgaa gaagatgaag aattactaga agatttaatc
    36601 attgaaaata accaagccat cgaaacaaca gaattacatc aacgtatctt agaaagtatc
    36661 acaacatcat acgcttcctt attatctaat gatatgaata cgattatgaa gacattaaca
    36721 cttttcacgg tactattaac gttaccaacg ctcgtattta gtttcttcgg tatgaatgtg
    36781 ccgttgccaa ttgatgacca tagttatata tcttggatta ttgtggtagg tatttcatta
    36841 attcttgtcg taattgttag tattttctta tggcgaaaac agaaattata actaaattaa
    36901 aaggtatgac agcttaaagt ttcaccctat tgcatttgca atgactgata ctttgattac
    36961 tgtcatacct ctttttttat tctacaactt ctttatttgc ttttctttta gataaaatta
    37021 aagtaactgt tatggcaacg atgaatgata ttgtcatacc aacaaagtag tgtaaccatc
    37081 ctgcatgtac tggattgatt gagataaatc caggcaatcc agcagttcct aatgcgattg
    37141 ctttaacctt gaagaaagca atatatgctg aaccaatacc tgatccaacg atagcgccaa
    37201 taaaaggata tcttagtttt aagttaacac caaacatagc cggttctgta ataccaagta
    37261 atgctgaaat acctgcggca gatgccacac cttttaactt cttattttgt ttaataataa
    37321 agaacgctgc aattgctgca ccaccttgtg caacattaga cattgtcgca atcgggaata
    37381 taaatgatcc acccgttttt gtggcatctg caattaatgt cgtttctaca gctataaagc
    37441 tatgatgcat acctgtaata acaatcggag catacaataa tccgaatatt aatccaccaa
    37501 ttgcaccacc aaattcataa agccatgtta aaccatctga taaccagtaa cctaattgtc
    37561 gagtgattgg acctacaaat gaaaatgtta gaaatgctgt tataaaaata gataacaatg
    37621 gtgttaacaa attatctaac accgttggaa taactttgcg taaccctttt tcaattgaag
    37681 ctaagatata agctgctaca agcataggta acacttgtcc ttgataacct acttgattaa
    37741 tatgcaaacc aaatacatcc caatatggaa tagccttacc tgcttcaact gcttttggga
    37801 aatcgtatgc gctcattagc gatggatgaa ccaatatcat acctaatgca gcacctaaaa
    37861 acggattgcc accaaaacgt tttgctgcac taaatccaat taaaattggt aataatgtaa
    37921 atggtgcatt cgcaaaaaca tttatcattt cagctaatcc agcaaattga ctatagacat
    37981 ctatcaatga tttacctgaa aagaataaat ctttcgcagt caaaatgtta tttaacccca
    38041 ttaataaacc accagcaacg atggctggta taatcggaac aaagatatct gaaagcattt
    38101 ttacaaatcg ctgtaacgga ttcatatttt tagcagattg tgctttgact tccgaagtgg
    38161 ttgatgcttc ttttccagtt aatttttcca gttcactaaa tactttattg actgtaccag
    38221 acccaataat aatttggtat tgtcccccag tagaaaacgt ccctttaact acatccatat
    38281 tgtttagcgc ctcttcattt actaaacttt catcatttaa aactaatcgt agtctcgttg
    38341 cacaatgcgc cattgcatct aaattctctt ctccgcctat cgcgttcaaa atatcttctg
    38401 cggattgctt ataattcata tatttagcct cctaattaga accggttcca tttattccac
    38461 tttattgtaa ccggttccaa aaatatttgc aacactctat tatcatttta tataaacacc
    38521 tacaccattt ttgatagcgc attcattttt attgctatac tatatgcatg tatattaaca
    38581 ttaattatcg gaggtaattt tatgaaagaa cgtggccata tcgaacagct ttggcgtgag
    38641 gaaaaatatc atgtattgtt acacagtcaa cagtcttacc aaatgataag gaatgcttta
    38701 aaaacggatt tatcacttca tcaagtccaa caaatgattg atgatgcttt gttaattgaa
    38761 ccaagtatag gaagtgtatg taatgctttt gatcatatgt ggggatattt taaaaaatgt
    38821 gcgaatgaag aagaaagaca acaatcaaaa ctacttaaag ctgattttat taatggtaaa
    38881 atcgacaccc aaactttatt agatttttta gcagaacttg ctaataaata tgatgttcaa
    38941 tatttactac aaagtcgtgt tttaaacaca aaaagaaaga gatagattga aactttagtt
    39001 gtaacggaca aatagtagtc attggagttc agcaattcat actttgtact aaagtttact
    39061 ataatctatc tctcaaggtt taaatgtaca tatctatatt aaaatgcgtt tcatgatgtt
    39121 agaagatacc atacacattt aattagttac agcataaatc aatttatacc cttaattatt
    39181 acattgttta tattttaaat tcgggggagt aattttaagt aatatcttgt tgctgctaat
    39241 tctattgtta ataaattgat attagatgta gaaattgagt gtgaaagtta ataatagatg
    39301 atttagctag taacataatt aattcatata tagtcaaaaa gttctgttag atactgttct
    39361 tgatgaatat tctttgatgt taggtgttag ctattctaga tgagtttctt agatgtggat
    39421 gcctgtcttg atgaagttat ctatgatgtt aatataatac ttgatgttga ttcttagatg
    39481 ttagtgcgat ttcaagatgc tgattctttg ttgttgcact atcttggtga cgtttctagt
    39541 tgtttatagt tatcgcatct cttgatgtaa aatctaagat gtttatgcat ttctagatgt
    39601 taattcttcg ctgcttaaga attatcttga tggtaaatct agttgtgcca tgcattttct
    39661 catgatgaat ctaaggtgtt aattcattga tgtgtgctgt ttcttgttgc ttcattatct
    39721 tgatggtgaa tttcgttgtc taatgcactt tttcaaatga ttattctaat tgttacggca
    39781 ataactagat ggattttctt agatgttcac ttttctagat gtttatactt atcttgatgt
    39841 tttctaaaca gaacttttaa acgctttatt tttcagtaga ttgtttaaaa tttcttagtt
    39901 gatggttatt gttgttgatt tgaataattt gtagcgaata ttttgtaaca gggctactaa
    39961 gaatttttat aacaagaagt gatttcaatc gtactaattt tcagcgtttg atgacaaaag
    40021 tgtatgtcca aacttaaata atggcgataa aatttaagtc atgggtacat ttaatgtttt
    40081 ttgattcaaa cttccatttt ggtcaatttg ctttttttat aacatagttg aatatcaata
    40141 aaagattagc aagtaagttc aaaatggcta tgtattgttt tttgaaatac ataggtttga
    40201 aatctatatt aattatgcac caaataattt aattagactc tatcgaaaat ttccaaattt
    40261 tgcttactat ctttctaatt ttacttttat attgtgcaca atgcataaaa acaagcgttt
    40321 tcctaggagt tttcattaat ttcttttatt tttcactatt accttttcaa aaatattcaa
    40381 ctataatagg tatactatcc atgattttaa aaatttccat gttttacatt taaatgatag
    40441 atttcaatat atattaggca ggagagagaa atatgacatg ccaacttaaa atacatcata
    40501 cattatcgac aataccaagt cgtaatatta ataatattat ggtgctattt tcacttacaa
    40561 gtaaactcaa tattacgatt aatggtgaaa ccaaagacgt aagtaattat attatcttaa
    40621 ttaaccatgg tgatatttat aatattaacc acggcgaaaa tataatcgaa ttaatgatac
    40681 ccgtttttta ttttcatcaa caagatgatg atttctttaa tggttattta gatcgtcatt
    40741 tattacaatc aagtaattat attaagtcat taattgccga tttaatcagt acaccaacaa
    40801 gttcttcttt aatgggaaaa aatataggtc aaagtattat agacacttta cttaaagaag
    40861 cttttataag aatagatcat gaatatttac caaatattgc tttaagcaat ccagtgttta
    40921 tagattgtgt aaactatatt catgacaata ttgatgcgca cttgtcttta aaagatatag
    40981 cgatgcattg caacatctct gaatcatatt gttctaatct ttttgttcga tatttgagta
    41041 tgaattttaa agattatttt acaagtatta aacttgttaa cgccatcaat ttattacttt
    41101 ctacaaaaca ttctattaca actgtttctg aattggctgg ttttaacagt catacaaatt
    41161 ttgcaaatca atttaagaat tacttgcatt ttagtcctaa acagttccgt tcactcgttt
    41221 ccaagattac tgaaccacca caaatacact tccaacaaga taacgtatca caattcactg
    41281 agttaatttc aacaattgat ttaacagctc agttggctac aaatacaaca gatattcata
    41341 tagatgattt taatccgaaa gatcgaagtc agcgtgccaa agtatttgtt cgattcagta
    41401 atttcaatga actatttcaa tttattttca atgaatatta cgatattaac tttgagcact
    41461 taccaaaacc tgtcgttttc attgacgata ttcacgatat tgagattagc caaacgaatt
    41521 acaacctgtt aaatagatgt tttgaaaagc ttttcgaaaa aaatataggt ttagcaatcg
    41581 ctattaaatc aacacaacaa ttcgaaacga tgaagcaatt aatactaaca tttttacaag
    41641 gcaatcaaga ctataagaca agcaagaaat tagttaaatt tatgctcgta ttttgctcta
    41701 attctatgac agcagaagaa attcatttat gtcatcttaa aattaaaaac aaaaataaag
    41761 aaattaaata tagtgtgaca gtcgatggct ttttagaaac ttattcaacc gtggaacaag
    41821 tttatgatgt catgcagcgt cttaaattcc attattactt tattgatatt gaaaattcaa
    41881 aaactgcaac acatcttatc actaaaaatc aacactatca tcaaactgac acacattttg
    41941 aacagtataa gaaatttatt ttagattcag gtatatcatc aacacaattt gtatataata
    42001 acctgtctgt aagcgggttt aaatatacta atgatggtaa gaatccaatt caattatctg
    42061 acatagtgta tcacttaatc gcattattac gatatggcgg tggcattagc tatcaattat
    42121 tagatgacca ttcaaattat atttccttgt acaacaaata tggtagcccc ctaccattaa
    42181 tgcatttata taaaatgttt agaccttttg ttaacgaaga cattgaaatt acaaataatt
    42241 atgtattgag tcgtaaagat aataactacc atttcttatt attcaataaa attaatgatc
    42301 gatatatgtc agacgtaaaa caagatttca ttttccataa tgaattacct caagactctt
    42361 tgatgattat taaaacattg aatcatgaac atggttcaat tcaacatttg cttccaataa
    42421 gcgatcaact tgtttatata gaaaaagaaa ttttagatga attagacaaa acgaattacc
    42481 ctaaaacgga gcttgcagtt caagaagaaa ctggtcgtac atttgaactc aagttaaatc
    42541 acgacgaggt taaatatatt tgctttaaac caagctaaat actaacagtc ctcttgtgtt
    42601 tagtttctta cgttaaaggc tatttatatc ataaggagat gatgtaggat gagtaactca
    42661 caagcaattc aagcaattga aaacgtgtta gcaacgtcaa aagttggtgt attatcaact
    42721 gcatataata acaaacctaa tagtagatat atggtctttt ataatgatgg tcttacttta
    42781 tatactaaaa cgaatatcca ttctgctaag gtcaaagaaa ttaaagataa tccagcagca
    42841 tatgttttgt taggctataa cgacacaact aatcgtagtt tcgttgagat ggaagcgacc
    42901 atcgaaatcg ttacagaaca agaagtgatt gattggctat gggaaacaca agacaaaagc
    42961 tttttcagtt caaaagaaga cccagagtta tgtgttttaa gagtagttcc gcaatccatt
    43021 aagctaatga atgataaatc attagataca cctattaaaa ttgatttata atatgtaagt
    43081 ttttagtttt aaaattagcc agcaattgaa catgttagct ataaatttca acagtatcct
    43141 atttatatat atttcgattt tgaaagcgtt taatactttt aactatattt ttattatata
    43201 acaatatttt agacacattt tattcacatt tattgtgatt aaggtgtgtc tttttaaatt
    43261 aattttatgt aatataaata ctgcatttgc aaactgttgt acttttaggt ataacagaat
    43321 taactacatt taaggagatt gatgaaccgt gaaaaataaa aaagggtttg gtcttggtat
    43381 tagtttaatt gccatcatgt tgattgtatg tattgtacta gtaatcatga tgatgactgg
    43441 tggaaagaaa gatacatatt atggaattat gaaagacaat gctacaattg aaaaaatgat
    43501 tagtgaaaaa gatgaaagca ttgagaagaa cgttaaatta ccttcagatg cagacgtttc
    43561 agttaaaaaa ggtgattttg taattgttta taaattagca gattctgata aaattgttaa
    43621 agtaaaaaaa gttgatcatg acgatgtacc acatggttta atgatgaaaa ttcatgacat
    43681 gggcaaaatg cacatgaaac actaattaag ctttaatttt gaataatata taagatatta
    43741 aaagcagcag taagatgttt tctaattgaa aattatctta ctgctgcttt ttaagaatta
    43801 ctgtgtcagt ctatttccgg ttcgcctgcg ctttgcgcat gcataaaagc ccctaacaac
    43861 cagaggtcac ttcgtttcgg ttcgcctgcg ctttgcgcat gcataaaagc ccctaacaac
    43921 ctgaggtcac tgcgcttcgg ttcgcctgcg ctttagcgca tgcataaaag cccctaacaa
    43981 cctgaggtca cttcgtttcg gttcgcctgc gctttagcgc atgcataaaa gcccctaaca
    44041 acctgaggtt gccttcattt cggttcgcct gcgctttgcg catgcataaa agcccctaac
    44101 aacctgaggt tgccttcatt tcggttcgcc tgcgctttgc gcatgcataa aagcccctaa
    44161 caacctgagg tcacttcgtt tcggttcgcc tgcgctttag cgcatgcata aaagccccta
    44221 acaaccaaag gttgtaaggg gctttaaatg tcagatagta ttttttaaat tgattttaaa
    44281 tattcttgac cttttgcttt gtcatatacg ttttcccatt tagctataac gattgttgat
    44341 aatgcgttac caataacgtt tacacatgta cgtaccatat ctaagatacg gtcaacacca
    44401 ataattaatg ctaaaccttg tgccggtaag cccatggcac ctaatgttgt taataaaaca
    44461 acgattgaag ttcctggtac tgccgccata cctttagacg taatcattaa tgttaacatc
    44521 aacacaattt gctctgataa tgttaagtgc attccataca tctgtgcaac gaataatgct
    44581 gcaatagatt gataaagtgc tgatccgtct aagttaaacg tataaccaat tggtataaca
    44641 aaagaagtaa tttcttttgg agaaccgaag ttttccattt tcttcatcat tacaggaagt
    44701 acagcttccg aacttgatgt agaaaatgct aaaagcaatt cacttttcaa gattctaata
    44761 atattcatga tattaatacc acacatccat gcaactagtc ctagtatagc gaatacaaag
    44821 aacaccattg caaagacaac aactaatact aattttaata gtggtaataa tgcggatgca
    44881 ccaaatgtaa taattgtagt acaaatgaat gcaaacactc caagtggtgc taattttaaa
    44941 attttattaa tcatccagaa cacagcttca agcgatccgc ttaaaaattc tttaactggt
    45001 tctgcttttt tacctactgc agctaatcct aatccaaaga atactgcgaa gaagataata
    45061 ggtaataatt cacccttatt taaagcttca aaaaagtttg tcggaataat atgtacaatg
    45121 gtatcaataa aatgatttcc atatgtagat tgttctgctg catgtgcagt tgattgatat
    45181 ttagaaatat cacctttagg taattttgtt gggtctaatc cagcacctgg tttaaatagg
    45241 ttaccgaaga taatccctaa acctattgcg attgttgtaa taatttcaaa gtataaaatt
    45301 gttttccagc cataacgccc tacagttttc gattccccaa cgttcgaaat agaaagcgct
    45361 agcgagcaaa atacaactgg tataacgatc attttaatta aatttaaaaa tacgtcacca
    45421 aatggtttaa tgtaatttgc tacgttttct tgtccatata ataaaagtcc tacgacaaca
    45481 cctaacacta atgcaataac aacttgcata ggtaggctaa tttttctctt gaatagagcc
    45541 atagtacaaa ctccccttca tctgacatca ctcaattata tcagaaaatt gataattatc
    45601 tataaaaaat taaaatattt atcttttata gatgtcaaaa atcactaatt tccatacaaa
    45661 aactgtttac ctcaaataat taaaattgaa ggcactaaac tgttatacca gttatacgct
    45721 tcactatttt gatggtttat aattttgatt gaaatattta tgctttgcag ttttcaaact
    45781 tttcttagtt tctgtatcaa agccttcaac aaataatcct ttattagtac tgataggttg
    45841 cacaacataa gttacaccag gttcatcttt aaatgtaact tccttataga agagaccttt
    45901 tttagcacta tactctgttt tttctgattt aattttatct tttagacttt tctcttccaa
    45961 gtaactgtca ataagttgaa tattcttatg gccttgatat gttttcagac caaagaaaaa
    46021 tgctacagca acaattaatg aaataaataa tataatgata actttaatca cgtttttttt
    46081 cttcttcatt atgtaactcc tttttgctta tctattcagt atgaacgaat caatttattt
    46141 aataaagagt ttttaccaga ttgt
//
LOCUS       DAKPJH010000007        44389 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.007, whole genome shotgun sequence.
ACCESSION   DAKPJH010000007 DAKPJH010000000
VERSION     DAKPJH010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 44389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44389
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.007"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            274..867
                     /locus_tag="OY092_000317"
     CDS             274..867
                     /locus_tag="OY092_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HCX1075292.1"
                     /translation="MILVIDNNDSFTYNLIDYIKTQTKLTVQVVGIDNLLIEDVINMK
                     PKAIVISPGPGNPDDYPILNEVLEQFYQRVPILGVCLGFQCIVSYFGGNIIHGYHPVH
                     GHTTQLRHTNEGIFQGLPQNFNVMRYHSLIADGATFPNCLKITAKNDAAIIMAFEHIR
                     FPVFGVQYHPESILSEYGYRQVELFLSKVGDYCENRI"
     gene            851..2002
                     /gene="pabB"
                     /locus_tag="OY092_000318"
     CDS             851..2002
                     /gene="pabB"
                     /locus_tag="OY092_000318"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HCX1075293.1"
                     /translation="MRIEYNYRYYLTENEYKQYHIQLKGFIKKYVATKLADVGEVIHF
                     AQAQQRQGRYVSLYLSYEAAKYFNHVMCTHSLAKDDIYAVAYSFEKAESINSTYEHQT
                     SYVSKHHFSFVESSEVMMTNIKRVQQAIVEGETYQVNYTARLTDNIYYPISTLYERLT
                     QFSNGNYTALLQTDEIQVASISPELFFQKGQFNNVDNVIISKPMKGTMPRGKTEAEDQ
                     QYYKTLQTSSKDRAENVMIVDLLRNDIGRISQSGSIKVYKLFFIEAYKTVFQMTSMVS
                     GTLKNNTDLTQILTSLFPCGSITGAPKLNTMKYIKQLESSPRGIYCGAIGLLLPTEDD
                     KMIFNIPIRTIEYKYGQAIYGVGAGITIDSKPKDEVNEFYAKTKILEML"
     gene            2002..2610
                     /locus_tag="OY092_000319"
     CDS             2002..2610
                     /locus_tag="OY092_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HCX1075294.1"
                     /translation="MQLFETMKIDNGHIPRLTYHTNRIKCSSERLNFKFDEHAWRNEL
                     NDVTTKYHSGQYRLKIVLNAESEFETIVSPLPEKSSFTAKFQVLPKAVNPTFINNKTT
                     ERKHLAHNHETDLILLTSEDGKVLEFDIGNIVIEEDGKWYTPSYKDDFLKGCMRDYLI
                     DSDKLVEKDFNKNELIYKYHNNEIRLFLINSLREVADVHLCL"
     gene            2676..2882
                     /locus_tag="OY092_000320"
     CDS             2676..2882
                     /locus_tag="OY092_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075295.1"
                     /translation="MIIVYIVLLLILVYVNYRLVNRLLSENRIYVVRLIATITTVISF
                     ILVYALIHELMPFVVRAMDLMYHQ"
     gene            2972..3682
                     /locus_tag="OY092_000321"
     CDS             2972..3682
                     /locus_tag="OY092_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase subunit 1"
                     /protein_id="HCX1075296.1"
                     /translation="MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIE
                     IVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYG
                     SKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSK
                     QKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFR
                     PINENELEVGAFKDVNHN"
     gene            3666..4670
                     /locus_tag="OY092_000322"
     CDS             3666..4670
                     /locus_tag="OY092_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HCX1075297.1"
                     /translation="MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRL
                     VANDKNEATLEMTNKMAKIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLK
                     FRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTAR
                     HHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVIKNKGTEDFKEDAIQRFVKHDYKV
                     TSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQI
                     GTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
                     "
     gene            5144..7084
                     /gene="ltaS"
                     /locus_tag="OY092_000323"
     CDS             5144..7084
                     /gene="ltaS"
                     /locus_tag="OY092_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyglycerol-phosphate lipoteichoic acid
                     synthase LtaS"
                     /protein_id="HCX1075298.1"
                     /translation="MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNL
                     ILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFST
                     LNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMA
                     ASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALAS
                     EDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLN
                     KLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAI
                     LDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFF
                     KDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDE
                     ALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGF
                     WIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGD
                     FITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNP
                     DFKKVNPSKYKYETGPKANSKK"
     gene            7355..9238
                     /locus_tag="OY092_000324"
     CDS             7355..9238
                     /locus_tag="OY092_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HCX1075299.1"
                     /translation="MGMEAYKIEHLNKSYADKIIFDNLDLSISEGEKIGLVGINGTGK
                     STLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQ
                     YEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKEL
                     SGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYF
                     LNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAG
                     AKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKV
                     LFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKIAYFKQTD
                     ETLDRDIRMIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKR
                     LYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQS
                     YWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYE
                     QLMKRIEQSEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIK
                     EQQ"
     gene            9250..11031
                     /gene="recQ"
                     /locus_tag="OY092_000325"
     CDS             9250..11031
                     /gene="recQ"
                     /locus_tag="OY092_000325"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HCX1075300.1"
                     /translation="MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSI
                     CYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQHIEKELTS
                     GNIQFLYVAPERFENRYFLNLLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFM
                     LPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFIL
                     DYIKTHDEDAGIIYCSTRKQVEELQEALESQNIESVIYHAGLSNKEREEAQNDFLFDR
                     VKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERD
                     INLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQC
                     SNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTH
                     GLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATE
                     KVFINTVEGVDRALFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMIN
                     IDGVGSYKLKHYCPAFLETIQNYKAKV"
     gene            11252..12229
                     /locus_tag="OY092_000326"
     CDS             11252..12229
                     /locus_tag="OY092_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075301.1"
                     /translation="MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTL
                     KMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQM
                     KKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMD
                     EPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQID
                     TPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTSMSAYPIVYD
                     NQPIEVLYQLLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD"
     gene            12222..13736
                     /locus_tag="OY092_000327"
     CDS             12222..13736
                     /locus_tag="OY092_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HCX1075302.1"
                     /translation="MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILL
                     TKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYT
                     GIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRFMAKLSYKKLLMTLGVIVM
                     IIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAF
                     LFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMK
                     YNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNL
                     DNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKE
                     SFLKKHPEIKKPLNKLENKISDEDMQVMNYKVTVKNEDPYTVAKDYLKAKGLIK"
     gene            13976..15031
                     /gene="hisC"
                     /locus_tag="OY092_000328"
     CDS             13976..15031
                     /gene="hisC"
                     /locus_tag="OY092_000328"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HCX1075303.1"
                     /translation="MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSP
                     KVKEAISAHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLT
                     PGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDTSLVWLCNPN
                     NPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRT
                     FSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHK
                     NSVERERFYQLPQSEHFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIG
                     FKEQNDKMLEVLSNFKY"
     gene            15192..15734
                     /locus_tag="OY092_000329"
     CDS             15192..15734
                     /locus_tag="OY092_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'(3')-deoxyribonucleotidase"
                     /protein_id="HCX1075304.1"
                     /translation="MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLK
                     HVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDK
                     YEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDR
                     FERVNGWKDVEQYFLDNIEK"
     gene            complement(16127..17044)
                     /locus_tag="OY092_000330"
     CDS             complement(16127..17044)
                     /locus_tag="OY092_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HCX1075305.1"
                     /translation="MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLS
                     ESEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMAHNLQLPIGILPGGTF
                     NDFTKTLNIAPNHKQASEQMISAQVGTYDVIKVNNQYALNFVGLGLIVQNAENVQDGS
                     KDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILTANGPFIGGSRIPLTD
                     LSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKV
                     DIDGEISLETPIDIEVIPNAIQLLTVNDL"
     gene            17135..17236
                     /locus_tag="OY092_000331"
     CDS             17135..17236
                     /locus_tag="OY092_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075306.1"
                     /translation="MVINEINLYRVGRENIVIAVYNEHIKFLFILIT"
     gene            complement(17314..18819)
                     /locus_tag="OY092_000332"
     CDS             complement(17314..18819)
                     /locus_tag="OY092_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HCX1075307.1"
                     /translation="MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMR
                     ALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLG
                     AVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFV
                     IFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMK
                     PTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYF
                     TLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGW
                     KTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGI
                     VGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNA
                     SAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR"
     gene            complement(19157..19657)
                     /gene="queF"
                     /locus_tag="OY092_000333"
     CDS             complement(19157..19657)
                     /gene="queF"
                     /locus_tag="OY092_000333"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HCX1075308.1"
                     /translation="MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDY
                     FVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCM
                     NIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYP
                     EKIDNR"
     gene            complement(19677..20543)
                     /locus_tag="OY092_000334"
     CDS             complement(19677..20543)
                     /locus_tag="OY092_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001594836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCX1075309.1"
                     /translation="MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVA
                     MFIPLFFIYKYHQPMFGKLSSQPLLLTRSTLGLIGVLLNIYAIDHMVLSDADSLMKLN
                     PFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAAS
                     AYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVG
                     QIGVTLAYSFAAAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMF
                     EKARRDAKIIKK"
     gene            21344..21742
                     /gene="nrdI"
                     /locus_tag="OY092_000335"
     CDS             21344..21742
                     /gene="nrdI"
                     /locus_tag="OY092_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HCX1075310.1"
                     /translation="MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVT
                     GTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFE
                     LHGKNKDVIEFKNKVGNFNENHGREKVQSY"
     gene            21705..23810
                     /gene="nrdE"
                     /locus_tag="OY092_000336"
     CDS             21705..23810
                     /gene="nrdE"
                     /locus_tag="OY092_000336"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000855513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HCX1075311.1"
                     /translation="MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVK
                     DKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFF
                     KDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
                     GRVRRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIK
                     GVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRL
                     STISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVE
                     KKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQET
                     SIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAP
                     GVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIA
                     KERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMVIPTSEDWKKLQQDV
                     EQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTM
                     WYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKS
                     LYYTRNKLLSVEECTSCSI"
     gene            23930..24901
                     /gene="nrdF"
                     /locus_tag="OY092_000337"
     CDS             23930..24901
                     /gene="nrdF"
                     /locus_tag="OY092_000337"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HCX1075312.1"
                     /translation="MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSE
                     AEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHI
                     FTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFL
                     ETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEK
                     QKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEE
                     REFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK"
     gene            25271..26242
                     /locus_tag="OY092_000338"
     CDS             25271..26242
                     /locus_tag="OY092_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075313.1"
                     /translation="MKYLLKGKILLLLLILLTIISLFIGVSELSIKDIFHLSDSQQNI
                     LFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVSPTTAGTMEWTKLGILIALLFFP
                     TGHILLKLVFAVICSIGGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
                     TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGL
                     SYEKLINIALFITATITALVVVTVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGA
                     IFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNYAQQ"
     gene            26229..27185
                     /locus_tag="OY092_000339"
     CDS             26229..27185
                     /locus_tag="OY092_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HCX1075314.1"
                     /translation="MRNNNKKIMLLIVVTFLISMLYLFVGIDFEIFEYQFSNRLRKFI
                     LIILVGAAIATSVVIFQAITNNRLLTPSIMGLDAVYLFIKVLPVFLFGIQSVWVTNVY
                     LNFILTLITMVLFALILFQGIFKIGHFSIYFILLIGVLLGTFFRSITGFIQLIMDPES
                     FLAIQSSMFANFNASNSNLVSFSAVLLVILLVITIFLLPYLDVLLLGRAEAINLGISY
                     EKLTRILLVIVSVLVSVSTALVGPITFLGLLTVNLAHELMKTYEHKYILIATICLSWI
                     SLFSAQWVVENVFEATTEMSILIDLIGGSYFIYLLVRRRNAQ"
     gene            27182..27943
                     /locus_tag="OY092_000340"
     CDS             27182..27943
                     /locus_tag="OY092_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075315.1"
                     /translation="MIQVGNLTKTINNQMILDDISIEIEKGKLTSLIGPNGAGKSTLL
                     SAICRLIRFDEGEVKIDGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFP
                     YSKGRLTKEDHEIVNDALDLLQLQDIRKRNIKSLSGGQRQRAYIAMTIAQDTEYILLD
                     EPLNNLDMKHAVQIMQTLKMLAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSD
                     LKDNVIQSSVLSDLYDMDIQIEHIKNQRICLYFKD"
     gene            28062..29090
                     /locus_tag="OY092_000341"
     CDS             28062..29090
                     /locus_tag="OY092_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1075316.1"
                     /translation="MKKTVLYLVVAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENN
                     YKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGG
                     KSLPNFLESFKDDKYTNVGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPK
                     AKIVYVGADEKNLIGSMKQNTENIGKIYDKEDKAKELNKDLDNKIASMKDKTKKFNKS
                     VMYLLVNEGELSTYGPKGRFGGLVYDTLGFNAVDKKVSNSNHGQNVSNEYINKENPDV
                     ILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQI
                     EELEKVVK"
     gene            complement(29407..29721)
                     /locus_tag="OY092_000342"
     CDS             complement(29407..29721)
                     /locus_tag="OY092_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075317.1"
                     /translation="MPIVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNE
                     FEKHAIKRWSEPSFNEKAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYF
                     EI"
     gene            complement(29739..30662)
                     /locus_tag="OY092_000343"
     CDS             complement(29739..30662)
                     /locus_tag="OY092_000343"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HCX1075318.1"
                     /translation="MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPT
                     KNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDDAIIAG
                     SGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQ
                     GSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP
                     LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYEN
                     LIHYVQKTVKEKFGIELNREVRIIGEHPKES"
     gene            complement(30789..31307)
                     /locus_tag="OY092_000344"
     CDS             complement(30789..31307)
                     /locus_tag="OY092_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HCX1075319.1"
                     /translation="MYSNVQPFINSDLTNCFQSQYTEIESLLFNLLDSPVKYTKHIGG
                     THHFKYSTEPILDILVGVENLHDITSLDEKRLNYVGFYRLHHKYNKKVMMAKFNNFHE
                     LKQQVRLHIIQMNTQTFESYLALDYLLSTNDEIALQFNTKKHQILQHSFTIRQYEMQK
                     QKYFEKLCKKYL"
     gene            31427..32305
                     /locus_tag="OY092_000345"
     CDS             31427..32305
                     /locus_tag="OY092_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EMYY motif lipoprotein"
                     /protein_id="HCX1075320.1"
                     /translation="MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKE
                     LQHVMDNIHLKEIDHLSKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDT
                     MKVKKLKKEYMTLANEKKDAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESE
                     IKLADNKSEATNLTTKLEHNNKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITD
                     INQTNISDKHVNNARKNAIEMYYSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDIT
                     HGDKAFEKKLEKLEEK"
     gene            32459..32779
                     /gene="ytxJ"
                     /locus_tag="OY092_000346"
     CDS             32459..32779
                     /gene="ytxJ"
                     /locus_tag="OY092_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HCX1075321.1"
                     /translation="MAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFL
                     YERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLA
                     QAEE"
     gene            33204..34328
                     /locus_tag="OY092_000347"
     CDS             33204..34328
                     /locus_tag="OY092_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCX1075322.1"
                     /translation="MKVLVAMDEFHGIISSYQANRYVEEAVASQIETADVVQVPLFNG
                     RHELLDSVFLWQSGQKYRIPVHDADMNEVEGVYGQTDTGMTVIEGNLFLKGKKPIVER
                     TSYGLGEMIKHALDNDAKHVVISLGGIDSFDAGAGMLQALGAQFYDDEGRVVDMRQGA
                     GVIKYIRRMDMSNLHPKMETARIQVMSDFSSRLYGKQSEIMQTYDAHQLNHNQAAEID
                     NLIWYFSELFKSELKIAIGPVERGGAGGGIAAVLNGLYQAEILTSHALVDQLTHLENL
                     VEQADLIIFGEGLNENDQLLETTTLRIAELCHKHQKVAIAICATAEKFDLFESQGVTA
                     MFNTFIDMPESYTDFKMGLQIRHYTVQSLKLLKTHFNVEV"
     gene            complement(34516..35742)
                     /gene="pepT"
                     /locus_tag="OY092_000348"
     CDS             complement(34516..35742)
                     /gene="pepT"
                     /locus_tag="OY092_000348"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HCX1075323.1"
                     /translation="MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQ
                     QLGLPTDLDENGYLFATLESNIDVDVPTVGFLAHVDTSPDFNASNVKLQIIENYDGKP
                     YKLGNTKRVLDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPE
                     IKHGTIRIGFTPDEEIGRGPHKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAIITC
                     HGVNVHPGSAKNAMVNAIRLGEQFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATL
                     QYIIRDHDKKQFELRKKRILEIRDDINAHFENYPVKVDISDQYFNMAEKILPLPHIID
                     IPKRVFAKLDIPANTEPIRGGTDGSQLSFMGLPTPNIFTGCGNFHGPYEYASIDVMEK
                     AVQVIIGIVEDIAENH"
     gene            complement(35756..36250)
                     /locus_tag="OY092_000349"
     CDS             complement(35756..36250)
                     /locus_tag="OY092_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HCX1075324.1"
                     /translation="MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQ
                     LTVDLEFGKVGASFLGSLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRF
                     LVSNDYTSAVNTFLEVTLISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNM
                     NNRV"
     gene            complement(36268..37029)
                     /locus_tag="OY092_000350"
     CDS             complement(36268..37029)
                     /locus_tag="OY092_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HCX1075325.1"
                     /translation="MPDSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHS
                     YGLHNTYSFVSSTAIIFSLNDRTSTRLIRVQERTTDLEKIALTNSLSRKISNKELTID
                     EAKSEFIHLQHASLQYSFLTNFFAAAIACGFFLFMFGGVASDCWIAVIAGGSAFLTFS
                     FVQRYIQIKFFSEFVAAAVVISIAATFTKLGIATNQDIITIASVMPLVPGILITNAIR
                     DLLAGELLAGMSRGVEAALTAFAIGAGVAIVLLII"
     gene            complement(37225..38295)
                     /locus_tag="OY092_000351"
     CDS             complement(37225..38295)
                     /locus_tag="OY092_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCX1075326.1"
                     /translation="MFEAFIYNISVIVAGIYLFHRLQYSENKRMVFSKAYVTVLMTIV
                     SLLLSVYPIPYREDYLIHLTFVPLLFLGRFTNMVYTLSATVIVAIVEIVVFNNSIMYG
                     VTLIVIAAVTSAIGPFLKQNDVLSLLILNVVTIIILFGVALVSPIYTLSEVIILIPIS
                     LIITLASAITFVDIWHFFSLVNRYENEDKYDYLTGLGNVKEFDRHLNEISRKAEKEHQ
                     SIALLLIDIDGFKDVNDTYSHKSGDAVLKQMSQLLKNYVPNQFKIFRNGGEEFSVVIH
                     NYSLDQSVKLAENIRSGVEKSSFHLPNKEVIKLSVSIGVGYLTDDDPKSQRKVFKDAD
                     DMVHVAKNQGRNKVMFNPIINL"
     gene            38613..39668
                     /locus_tag="OY092_000352"
     CDS             38613..39668
                     /locus_tag="OY092_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HCX1075327.1"
                     /translation="MVTLLLVAVTMIVSLTITPIVIAISKRLNLVDKPNFRKVHTKPI
                     SVMGGTVILFSFLIGIWIGHPIETEIKPLIIGAIIMYVLGLVDDIYDLKPYIKLAGQI
                     AAALVVAFYGVTIDFISLPMGTTIHFGFLSIPITVIWIVAITNAINLIDGLDGLASGV
                     SAIGLITIGFIAILQANIFITMICCVLLGSLIGFLFYNFHPAKIFLGDSGALMIGFII
                     GFLSLLGFKNITIIALFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLA
                     LGYTHRQTVLLIYSISILFSLSSIILYVSPPLGVVLMFILIIFSIELIVEFTGLIDNN
                     YRPILNLISRKSSHKED"
     gene            complement(39832..40473)
                     /locus_tag="OY092_000353"
     CDS             complement(39832..40473)
                     /locus_tag="OY092_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HCX1075328.1"
                     /translation="MTQNIITVKKEHIIENVISKSKFIAHIKPVQNEDEAKAFIAAIK
                     KEHKDATHNCSAYTIGPEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYF
                     GGIKLGGGGLIRAYSGAVRDVIYDVGRVELREAVPCIVTLNYDQTGKFEYELASTHFM
                     LRNQTYTDKVSYYIDVVKSDYEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE"
     gene            40617..41483
                     /gene="fakB1"
                     /locus_tag="OY092_000354"
     CDS             40617..41483
                     /gene="fakB1"
                     /locus_tag="OY092_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000686350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB1"
                     /protein_id="HCX1075329.1"
                     /translation="MKIAVMTDSTSYLSQDLIDKYNIQIAPLSVTFDDGKNFTESNEI
                     AIEEFYNKMASSQTIPTTSQPAIGEWITKYEMLRDQGYTDIIVICLSSGISGSYQSSY
                     QAGEMVEGVNVHAFDSKLAAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMREHTGAYL
                     IVDDLKNLQKSGRITGAQAWVGTLLKMKPVLKFEDGKIIPEEKVRTKKRAIQTLEKKV
                     LDIVKDFEEVTLFVINGDHFEDGQALYKKLQEDCPSGYQVAYSEFGPVVAAHLGSGGL
                     GLGYVGRKIRLT"
     gene            41847..42929
                     /locus_tag="OY092_000355"
     CDS             41847..42929
                     /locus_tag="OY092_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCX1075330.1"
                     /translation="MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRM
                     RQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDI
                     DILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
                     VEHATIYMTATPPKQLLSEIPHENVIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYR
                     ILQDQINKQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQF
                     DVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKLECPTGKVLFFHEGV
                     SMNMIQAKKEIQKMNKLALKRGWIDE"
     gene            42922..43596
                     /locus_tag="OY092_000356"
     CDS             42922..43596
                     /locus_tag="OY092_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HCX1075331.1"
                     /translation="MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKA
                     RRCSRCLKYLNQNEAYCLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYL
                     CELLAHLIEIPQTSYDYIVPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPK
                     QSHLTKKERLADENPFIIDTELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFK
                     VFAFAR"
     gene            43657..44229
                     /gene="raiA"
                     /locus_tag="OY092_000357"
     CDS             43657..44229
                     /gene="raiA"
                     /locus_tag="OY092_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HCX1075332.1"
                     /translation="MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKV
                     KTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD
                     RGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
                     FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ"
BASE COUNT        16048 a         6279 c         7682 g        14380 t
ORIGIN      
        1 taaaaaaagc ctatctccat aaaagataga cgaaagaaat gggttgctcc tataatatat
       61 attaaaggtt taccaacgaa tgtttgaaat ttcaatgtct agttttttat agagggtttc
      121 agctaggaac ctctgatatt catttatgta cgatgaatag aatataccat atattagtta
      181 aaatcaaggt caggataatg acaatgcttt taaagtttta gctacatcca atacatatta
      241 taaaaataaa acacatttag aacggagtat acaatgattc tagtcataga taataatgat
      301 tcatttacat ataatttaat agactatatt aagactcaaa cgaaactaac agttcaagtt
      361 gttggtattg ataatctgct gatagaagac gtcattaata tgaagccaaa agcaattgtt
      421 atttcacctg ggccgggtaa tccggatgat tatcctatct tgaatgaagt gttagaacaa
      481 ttttatcagc gtgtacctat actaggtgta tgtttaggat ttcaatgtat cgtgtcttat
      541 tttggtggaa atatcattca cggctatcat cctgtacacg gacatactac acagttacgc
      601 cataccaatg aaggtatttt tcaaggactg cctcaaaatt tcaatgtaat gcgttatcat
      661 tcattaattg ctgacggagc gacttttcca aattgcttaa agattacagc aaaaaacgat
      721 gcagcgatta ttatggcatt tgagcatatt agatttccgg tttttggtgt gcaatatcat
      781 cctgaatcta ttttgagtga atacggttat cgacaagttg aattattttt atcgaaggta
      841 ggtgattact gtgagaatag aatataatta tcgctactat ttaactgaaa atgaatataa
      901 gcaataccat attcaattaa agggatttat aaagaagtat gttgctacta agttggctga
      961 tgtgggagaa gtgatacact ttgcacaagc gcagcaacga caaggtagat atgtctcgtt
     1021 atatttaagt tacgaagcgg caaagtattt taatcatgtt atgtgtacac attcattagc
     1081 taaagatgat atttatgcag tagcttatag ttttgaaaaa gcggaaagca taaattcaac
     1141 atatgaacat caaacttctt atgtatcaaa gcatcatttt tcatttgttg aatcttctga
     1201 ggttatgatg actaatatta aacgtgtcca acaagcaatt gtcgaaggcg aaacgtatca
     1261 agtgaactat acggcgcgct taacagataa catttattat cctattagta ctttatatga
     1321 acgattaact caatttagta atggtaatta tactgcgtta ttacaaacag atgaaatcca
     1381 agtagcgtct atctcaccag aattattttt tcaaaaagga caatttaaca atgtcgataa
     1441 cgttatcata agcaaaccga tgaaagggac aatgcctaga ggaaaaacgg aagctgaaga
     1501 tcaacagtat tataaaacat tgcaaacttc ttcgaaagat cgtgcagaaa atgtcatgat
     1561 tgttgattta ctaagaaacg atatagggag aatatcacag agtggctcaa ttaaggtgta
     1621 taaactattt tttattgagg catataaaac tgtatttcaa atgacttcga tggtaagtgg
     1681 aactttaaaa aataatacag acttaactca aattttaaca tcgttatttc cttgtggttc
     1741 gataacaggt gcaccgaaac tgaatacaat gaaatatatt aaacaattag aaagttcacc
     1801 tcgtggtata tactgcggag caattggact attacttcca actgaagatg ataaaatgat
     1861 ttttaatatt ccaattcgta ctattgagta taaatatgga caagcgattt atggagtcgg
     1921 agcaggtatt acaattgatt ctaagccaaa agatgaagta aatgaatttt acgcaaaaac
     1981 caagattttg gagatgttat aatgcaatta tttgaaacaa tgaaaattga taatggacat
     2041 atccctagac ttacttatca tactaatcgc ataaaatgtt cttctgagcg attaaacttt
     2101 aaatttgatg aacatgcatg gcgaaatgaa ttaaacgatg taacaacaaa gtatcacagt
     2161 ggccaatata gacttaaaat cgtattaaat gctgaaagcg aatttgaaac gatagtgtca
     2221 cctttacctg agaaaagtag ttttacagca aaatttcaag tgttgcccaa agcagttaat
     2281 ccaactttta taaataataa aacgacagaa cgaaagcatt tagcacacaa tcatgaaaca
     2341 gatttaatat tgctaacttc agaggacggc aaggtccttg aatttgatat tggcaacatt
     2401 gtcattgaag aggatggaaa atggtacaca ccaagttata aagatgattt cttaaaagga
     2461 tgcatgcgtg attatttaat agatagtgac aaacttgttg aaaaagactt taataaaaac
     2521 gaattgattt ataaatatca taacaatgag atacgtttat ttttgataaa tagtttacga
     2581 gaggttgccg atgtccacct ttgcctttaa aattagtatg ataataatgt agaaaacgaa
     2641 gtgaaaacaa atttaaaaat taaatggggc caaatatgat tattgtttat attgtgctgt
     2701 tgttaattct tgtatacgta aattatcgat tagtgaatcg attgctatct gaaaatagaa
     2761 tatatgttgt tcgtttgata gcaacaatta ctactgttat aagctttatc cttgtatatg
     2821 cattaattca cgaactcatg ccttttgttg tgcgagcaat ggatttaatg tatcatcagt
     2881 aaatttagtt gagtagataa aatgaactat tcaatcgatt ctattaatta aaaatgaaag
     2941 taaagtaacc aaatattgaa gaggtgtaca aatgaaaata tatagtcaag gtgaccaagc
     3001 cattgtagtc gcaattgaaa aagaagtatc taaaagttta accgaagatt tattaacact
     3061 tcgctcatat ttaattgaac aaaattatcc atttattata gaaattgtgc catcagaatc
     3121 agacatgatg attgtctatg acgcaaggga tatgattaaa caccataata tacaatcacc
     3181 ttttttatac atgaaagcac taatagaatc gattcattta aacataaaac atgattttaa
     3241 ccagcaagat ttgattgaaa taccaattgt gtatggttcg aaatatggtc cggatttaga
     3301 atcactttta aaacattaca aaatcaagct agaaactttt attgaattac attctaaggc
     3361 gcaatatttt gtttcgatga tgggatattc acctgggttt ccttatttaa ctggattaaa
     3421 taagaaattg tatattaatc acacgagtaa acagaaaaaa ttcattccag ctggttctgt
     3481 agtacttgaa gggaaaaaat gcggtattgt aacaacggat acaattaatg attggttagt
     3541 tattggttat acaccattat cactttttaa tccgaaagaa tcagatttcg cacgcttaaa
     3601 gttaggcgat aatattaaat ttagacctat caatgaaaat gaattagaag taggagcgtt
     3661 taaagatgtc aatcataatt gaaaaaagtg gcttattcag tagctttcag gactttggta
     3721 gaaggggata tgaacatgat ggtgtaattc catgtggtgc acttgatact ttagcacatg
     3781 aaattgctaa tcgattagtt gctaatgaca agaatgaagc aactttggaa atgactaata
     3841 aaatggcaaa gattcgtttt acagaaccta cgctgattgc attagcaggg ggtaatgtca
     3901 aagcatacac tgagcatatg actatatctc catataaatt gtatttgtta gataaaggcg
     3961 atgttttaaa gtttagagaa acaagttata catcgcgagt gtatttagct gtgggaggcg
     4021 gatttgaatt agatgcatgg ttaggatcta attcaaccga ctttaatgta aaaattggtg
     4081 gttttaaagg aagaacatta caagatggcg atgaaataaa gcttaagaga gattatacag
     4141 ctcgtcatca taagttattt gaaaaccttg ctcacacgaa acaaacagat tggggtattg
     4201 atggatacgc cttgtcattt aattatatgt ctgatgtatt tcatgtcatt aaaaataaag
     4261 gtacggaaga ttttaaagaa gatgccattc aaagatttgt gaaacatgat tataaagtaa
     4321 cgagcaaagc aaatcgcatg gggatgatgc ttgaaggtga aaaaatcaaa gccttttatg
     4381 aagatatgcc accgtatcag actgtcaaaa aaggaacgat acaaattaag cgtgatggca
     4441 cacctattat cttattaaat gatcattata cgctaggtag ctatccgcaa atcggtacaa
     4501 tcgcaagtta tcatttaacg aaattagcac aaaaaccgca aggatcacgt ttgaaatttc
     4561 aatttataga tattttaacg gctgaaaaga accttgttaa gtatagtaac tggttaaatc
     4621 aattattcca tggaatagaa tatagaatgc aattagaaat gatgaaataa tatttggtac
     4681 gtagctcata ctcgagtccg atgcaaataa tttcctccta atgtataatg aaataatact
     4741 gtgttttatc tgcgaaatgt atcatattca aattcgtttc acagtaaaat gaaaagataa
     4801 agtgtgtttt tacttgaatt ttgactaaaa ttactctata tttattaatt gagctatgct
     4861 tattattaca atttgattac aaattttaaa tttgttaatt gaatgataat attaaataaa
     4921 gaaacttaca caagcaaata tgagttgtag cccaaaatac ttgttaaatc aaagttgaaa
     4981 gctacaaata atgaaattta tagacttgaa tctgaaagta attactataa ttatgacaat
     5041 gttaactttt aaacgcactt attaattaac tacataatgt taatatctaa tttattcaag
     5101 tactttcgca agatttatta tctaaataac gggggaaaga atcatgagtt cacaaaaaaa
     5161 gaaaattagt ctttttgcgt tcttcttatt aaccgtaata acgattacct tgaagacgta
     5221 tttttcttat tatgttgatt tttctttagg tgttaaaggt ttagtacaaa acttaatatt
     5281 attgatgaat ccttatagtt tagtagcact ggttttaagt gtgttcctat tctttaaagg
     5341 caaaaaagca ttttggttca tgttcatagg cggcttctta ttgacgttcc tattatatgc
     5401 caatgttgtg tactttagat tcttctctga ttttttaacg tttagtactt taaaccaagt
     5461 aggtaacgta gaatctatgg gtggtgcggt tagtgcatca ttcaaatggt atgactttgt
     5521 ttatttcatt gatacgttag tttacttatt cattttaata tttaaaacaa aatggttaga
     5581 cacaaaagca tttagtaaga aatttgttcc tgtcgtaatg gcggcttcag tagcattatt
     5641 cttcttaaac ttagcttttg ctgaaactga cagaccagaa ttattaacac gtacatttga
     5701 ccataaatat ttagtgaaat atttagggcc ttataacttt acagtttacg atggtgttaa
     5761 aactatcgaa aataatcaac aaaaggcgtt agcatctgaa gatgacttaa caaaagtatt
     5821 aaattatacg aagcaacgtc aaacagagcc taacccagaa tattatgggg tggcaaagaa
     5881 gaaaaatatt attaagattc atttagaaag tttccaaacc ttcttaatta ataaaaaggt
     5941 taatggtaaa gaagtaacac cgtttttaaa caaattatca agtgggaaag agcaattcac
     6001 atatttccct aactttttcc atcaaacagg tcaaggtaaa acatctgact ctgaatttac
     6061 aatggataac agtttatacg gcttaccgca aggttctgcc ttttcattaa aaggagataa
     6121 tacgtatcag tcattaccag caattttaga tcaaaagcaa ggttacaaat ctgatgttat
     6181 gcacggtgac tataaaacat tctggaacag agaccaagta tataaacact ttggtatcga
     6241 taaattctat gatgcaacat actatgacat gtctgataaa aacgttgtaa acttaggctt
     6301 gaaagacaaa atcttcttta aagattctgc taattatcaa gctaagatga aatcaccatt
     6361 ctattctcat ttaattacat tgactaacca ctatccattc acattagatg aaaaggatgc
     6421 aactattgag aagtcaaaca caggtgatgc aacagttgat ggttatattc aaacagcacg
     6481 ttatttagac gaagcattag aagaatatat taatgacttg aagaaaaaag gattatatga
     6541 caattcagtg attatgattt atggtgacca ctatggtatc tctgaaaacc ataacaatgc
     6601 catggaaaaa ctattaggtg aaaaaatcac accagctaaa tttacagatt taaacagaac
     6661 tggtttctgg attaaaatcc ctggtaaatc tggtggtatc aataatgaat atgctggtca
     6721 agtcgatgta atgccaacaa ttttacattt ggctggtata gatacgaaga attatttaat
     6781 gttcggtact gatttattct ctaaaggtca taatcaagta gttccattca gaaatggtga
     6841 ctttataaca aaagattata aatatgttaa tggtaagatt tattctaata aaaataatga
     6901 actcataact actcaaccag ctgatttcga aaagaataaa aagcaagttg aaaaggatct
     6961 cgaaatgagt gacaacgtgc ttaatggtga tttgtttaga ttctacaaaa atccagactt
     7021 caaaaaggta aatccttcga agtataaata tgaaacagga cctaaagcaa actctaaaaa
     7081 ataatattta aacacgaact cggattgata aaatatcaat ccgggttttt attatgttct
     7141 tttatattat gttttacatt atatgtgttg ataaaaaggt atattataaa gatcattagc
     7201 atagtcatca aagccttatc aaattttatt tatagttgaa gcaacaattt attaaattat
     7261 gacacttaac agtatcgatt tcttttgatt tcaaaaaggt gtataatgta tagaactgat
     7321 ttaagtacgt agagatttca acagaagaag gaagatgggt atggaagcat ataaaattga
     7381 acatttaaat aaatcttatg ccgataagat tatattcgat aatctagatt tatcaatttc
     7441 agaaggtgaa aaaataggtt tagtaggcat aaatggtaca gggaaaagta cattgttaaa
     7501 agtaattggt ggtattgatg atgattttac agccaatgtt atgcatccaa atcaatatcg
     7561 aattcgttat tcgtctcaga aacaggatct taatgaagat atgactgttt ttgatgcagt
     7621 attaagttct gatacaacaa ctttacgcat catcaagcaa tatgagcagg cagtacaagc
     7681 ttatgcggat gaccaaagtg ataaattgtt caagcgaatg atggatgcgc aagatgctat
     7741 ggatcaacat gatgcttggg actataacgc tgaaattaaa acaatcctct caaaactagg
     7801 tatacatgat actactaaat acattaaaga attatccggc ggacaacaaa aacgtgttgt
     7861 acttgctaaa acattaatag aacaaccaga tttattgtta ttagatgaac ctacgaacca
     7921 tttagacttc gaatcaatca gctggttgat caattatgtg aagcaatatc ctcatacagt
     7981 tttattcgta acccatgatc gatatttttt aaatgaagtt tccactagaa ttattgaact
     8041 aaacagaggt aagttagcgt catatcctgg taactatgaa tcttatattg aaatgcgcgc
     8101 tgaaagagaa gtaacacttc aaaagcaaca acaaaagcaa cgagctttat ataaggaaga
     8161 acttgcttgg atgagggctg gagctaaggc tcgtactaca aagcaacaag ctagaattaa
     8221 tcgatttaat gacctagaaa atgaagttaa ccagcaatat aaagacgata aaggtgaatt
     8281 gaatcttgct tattcaagat taggtaagca agtgttcgaa ttagaagact tatcaaaggc
     8341 tattaatgat aaagtattat ttgaacatct aacggaaatt attcaaaaag gtgagcgtat
     8401 tggtgttgtt ggtccaaatg gagctggtaa aacaacactc ttaaatattt tgagtggaga
     8461 agaccaacaa ttcgaaggta aattgaagac tgggcagacg gttaaaatag cttattttaa
     8521 gcaaacagat gagaccttgg atagagatat tcgtatgata gattatttaa gagaagaaag
     8581 tgagattgca aaagaaaaag atggaacctc ggtatctatt acacaacttc ttgaacgatt
     8641 tttatttcca agtgcaactc atggtaaaaa agtttataaa ttatctggtg gagagcaaaa
     8701 gcgtttgtat ttattacgtc tactcgtaca ccagccaaat gttctgttgt tagatgaacc
     8761 gacaaatgat ttagataccg agactttaac aatacttgaa gattatattc atactttcgg
     8821 tggtacagtg attaccgtaa gccatgatcg ttacttctta aataaagttg cacagtcata
     8881 ttggtttatt catgatggtc agatggaaaa gattatcgga acttttgaag attatgaaag
     8941 ttataaaaaa tcattagata aaaataaatc cacattgaag caacaatcta aatcttctac
     9001 aactgtacgt aagaaaaatg ggttatcata taaagaaaaa ttagaatatg aacaattgat
     9061 gaaacgtata gaacaatcgg aagtaagaat ggaagaaatt gatgtgctca tgattgaggc
     9121 aagtgcagat tatgggaaaa ttaaagaatt aaacgaagaa aaagaacaac ttgaaattca
     9181 atatgattta gacatcacaa gatggagtga gttagaagaa attaaagaac aacaataagg
     9241 ggtcaattta tgatgcaaca aacattatcg cattactttg ggtatgaaac gtttcgacca
     9301 ggacaagaag aaattattag caaagtatta gaccatcgta atgtgcttgg tgtcttacca
     9361 actggtgggg gtaagtctat atgctatcaa gtaccaggtt tattgttagg tggtacaacg
     9421 attgttataa gtccactaat ttcattaatg aaagatcaag tggatcaatt aaaggcaatg
     9481 gggattcaag ctgctttttt aaacagtagt ttgactcaaa aagaacaaca acatattgaa
     9541 aaagaattaa caagtgggaa tattcaattt ttatatgttg caccagaacg atttgaaaat
     9601 cgatattttt taaatttgct tcaacgtatc aagattcatt tagtggcgtt tgatgaagcg
     9661 cattgtatat ctaaatgggg acatgatttc aggccgagtt accaaaatgt tatttcaaaa
     9721 gtgtttatgt taccacaaga ttttacaatt attgcattga cagcaactgc aacagttgaa
     9781 gtacagcaag atattagaga aaagttaaat atcgctcaaa ctgatcaaat taaaacgagt
     9841 actaagcgta gaaacttaat ttttaaagta aatcctactt atcaacgtca aaaatttata
     9901 ttggattata ttaaaacaca cgatgaagat gcaggtatta tttattgttc tacacgtaag
     9961 caagttgaag agcttcaaga agccttagaa agccagaaca ttgaaagtgt tatatatcat
    10021 gcaggtttga gcaataaaga aagagaagaa gcgcagaatg atttcttatt tgatcgtgtt
    10081 aaagtagtcg ttgctacaaa tgcttttggt atgggtattg ataaatccaa tgtacgcttt
    10141 gttattcatt ataatatgcc tggagattta gaatcttatt atcaagaagc gggtcgtgca
    10201 ggtcgtgacg ggttgaaaag tgaatgtatt ttgttattta gcgaacgcga tatcaattta
    10261 cacgagtatt ttataacagt ctctcaagct gatgatgact ataaagataa aatgggtgaa
    10321 aagttaacta aaatgattca atatacaaaa acaaaaaaat gtttagaagc aacaattgtc
    10381 cattattttg aaccgaatga aaaattagaa gaatgtgaac aatgtagtaa ttgtgttcaa
    10441 caagataaat catataatat gacacaagaa gctaagatga ttattagttg catcgctcgt
    10501 atgaaacaac aagagagtta tagtgttatc atccaagtat taagaggaga gtcaacagat
    10561 tatattaagt ataaaggtta tgaccaaatt tcaacccatg gtttaatgaa aggttacaca
    10621 acatcagaat taagtcactt aatagatgaa ttaagattca aagggttctt aaatgaaaat
    10681 gatgaaatat taatgtgtga tacttcaatt aaaaaattac tcagtaatga agtagaagta
    10741 ttcacaacac catttaagca aaaagcgact gaaaaagtat ttataaatac ggttgaaggg
    10801 gttgaccgag cattattcag tcagttggta gaagttcgta aaaagttaag tgacaaatta
    10861 acgatagcac ctgtaagtat attttctgat tacacgctag aggaatttgc taaacgtaag
    10921 cctgcttcga aacaagatat gattaatatt gatggcgtag gtagttacaa attaaaacat
    10981 tattgtccag catttttaga aacgattcaa aattataaag ccaaagtata gtgaaggcac
    11041 ctagtaaaca ttccttgttt tactgggtgt tttttgaatt caaagtaaaa taacactatt
    11101 tcttaactgg agattaccta ttattcatta ttttgttaaa aaagttcaag gataaatcat
    11161 ttaaatttga aaattgtaat aaacgtggtt aaatagggaa tacatacata taatctcggt
    11221 tttatgctat gagaaaaaaa gaggtggcaa agtgattaag tttaaaaatg taactaagcg
    11281 ttatggcaaa catgttgctg tcgataacat tagtttcaat attaatgagg gtgaattttt
    11341 tgtgctcatt ggaccttcag gttgtggaaa aactacgaca ttaaaaatga ttaatcgact
    11401 cattcactta agtgaaggtt atatttactt taaagataaa ccaataagtg attatccagt
    11461 atacgaaatg cgttgggata ttggatacgt attgcagcag attgcattat tcccacatat
    11521 gacaatcaaa gaaaatattg cacaagtgcc acaaatgaaa aagtggaaag aaaaagatat
    11581 agataaaaga gtagatgaat tacttgaaat ggttggatta gaacctgaaa aatataaaaa
    11641 cagaaaacct gatgaattgt caggggggca acgacaacgt gtaggagtta tacgtgcgtt
    11701 agcagctgat ccaccagtta ttttaatgga tgaaccgttt agtgcattag acccaatcag
    11761 ccgagaaaaa cttcaagatg atttaattga attacaaact aaaattaaga agacaatcat
    11821 atttgttaca catgatattc aagaggcgat gaaacttggt gataagattt gtcttttgaa
    11881 tgaagggcat attgaacaaa ttgacacacc agaaggattt aaaaataatc ctcaaagtga
    11941 atttgttaaa caatttatgg gtagtcattt agaagatgat gcgccatgtg ttgaagagaa
    12001 cgcaattatc cgtgacttgg atattatgaa accaatcgat gaggttacat ctatgagcgc
    12061 ttatccaatt gtttatgaca atcaaccaat tgaagtattg tatcaacttt tatcagagag
    12121 cgagcgtgtc attgtcatgc aagaagatag cgtaggtcaa tatgttattg ataggaaaga
    12181 tatcttcaaa tatttgtccc agaaaaagga ggtagctcaa catgactaac tttttcgaca
    12241 tattgagtga acgtaaggga caactctttt cgacaatgat agaacatatt caaatatcat
    12301 ttatcgcatt attgattgca actgctattg cggtaccatt aggtatttta ttaacgaaga
    12361 ctaaaacgat atctgaaatc gtaatgaata ttgcggcaat tcttcaaacc ataccatcgt
    12421 tggcattatt aggtttaatg attcctttat ttggtatcgg tcgtgtgcca gcaattatcg
    12481 cacttgtagt gtatgcgttg ttaccaattt taaggaatac gtatactgga attaaagaag
    12541 ttgatccatc actcattgaa gcggctaaag gtataggtat gaaaccattt agacgtttaa
    12601 ctaaagtcga acttccgata gcaatgcctg ttataatggc tggtgtaaga acggctatgg
    12661 tattaattat aggtacagca acactagcag cattaattgg tgcaggcgga ctaggagatt
    12721 taattttatt aggtatagac cgtaacaatg catcattgat attattaggt gcaattccag
    12781 cagccttatt ggcaattata tttgatttaa ttttaagatt tatggctaaa ttatcttata
    12841 aaaagttatt gatgacgtta ggtgttatag tgatgattat tatactggct atcgctattc
    12901 ctatgtttgc acaaaaaggt gataaaatta cgttagctgg aaagcttggc tccgagcctt
    12961 cgattattac aaatatgtat aaaattttaa tagaagaaga gaccaaaaat actgtagaag
    13021 tgaaagatgg tatggggaaa acagcatttt tatttaatgc tttaaaatct gatgatatag
    13081 atgggtattt agagtttact ggaacagttt taggtgaatt aacaaaagaa ccattgaagt
    13141 caaaagaaga gaaaaaagtt tatgaacaag ctaagcaaag tcttgaaaag aaatatcaaa
    13201 tgactatgtt aaaaccaatg aagtataaca atacgtatgc tttagctgta aaacgtgatt
    13261 ttgctaaaca acataatata cgtacaattg gtgatttaaa taaggttaaa gatcaactta
    13321 aaccaggatt tacattggaa tttaatgatc gtccagatgg ttacaaagct gttcaaaagg
    13381 cttataattt aaatttagat aacatacgta caatggaacc taagttgaga tatcaagcga
    13441 tcaataaagg taatattaat ttaatagatg catattcaac tgacgctgaa ttaaaacaat
    13501 atgatatggt tgtgttaaaa gatgataagc acgtatttcc accatatcaa ggagcaccat
    13561 tatttaaaga aagcttttta aagaaacatc cagaaattaa gaaaccgtta aacaaattag
    13621 aaaacaaaat atctgatgaa gatatgcaag tgatgaacta taaagtaaca gttaaaaatg
    13681 aagacccata tacagttgcg aaagattatt taaaagcaaa agggttaatc aaataacgac
    13741 caacgccaca taagatgagg ggcacgccat tatatcttat gtggcgttgc tatatttaca
    13801 tctatgttta tgtacaattt aaacatacaa tattaataat tgaatttgtt atgctaatta
    13861 ctatttacat tagtaatgta tgaaaatagt agcattgcat tttagaaaca tagagcgata
    13921 taatgaatat aagtttttta aaatttcagt taattctaag gaggttgttt ttattatgaa
    13981 agaacaactt aatcaactat cagcatatca gcctggttta tctccaaggg cattgaaaga
    14041 aaagtatggc attgaaggag atttatataa acttgcatca aatgaaaatt tgtatggacc
    14101 atcgccaaaa gttaaagaag cgatatcagc acacttagat gagttatatt attatcctga
    14161 aacaggatca ccgacattaa aagcggcgat tagtaaacat ttaaatgtag atcaatcacg
    14221 cattttattt ggtgcgggat tagatgaagt tatattaatg atttctagag ctgtattaac
    14281 gccaggggat actattgtta caagtgaagc gacattcggt caatattatc acaatgcgat
    14341 tgttgaatca gctaatgtga tacaagtacc tttaaaagat ggtggcttcg atttagaagg
    14401 tattttaaaa gaagttaatg aagatacgtc attggtatgg ttatgtaatc caaataatcc
    14461 tacaggtaca tattttaatc atgagagctt agattcgttt ttatctcaag tacctccaca
    14521 tgtaccagta attatagatg aagcttattt tgaatttgtg acagcagagg actacccgga
    14581 tacacttgct ttgcaacaaa aatatgacaa tgctttctta ttacgtacat tttcaaaggc
    14641 gtatggatta gcgggtttac gtgtaggata tgtggtagca agtgaacatg cgattgaaaa
    14701 atggaacatc attagaccac catttaatgt gacacgtata tctgaatacg cagcagttgc
    14761 agcacttgaa gatcaacaat atttaaaaga ggtaacacat aaaaatagtg ttgaacgcga
    14821 aagattttat caattacctc aaagtgagca tttcttacca agtcaaacga attttatatt
    14881 tgtaaaaaca aagcgggtaa atgaacttta tgaagcgctt ttaaatgtag ggtgtattac
    14941 gcgaccattt ccaactggtg ttagaattac aattggtttt aaagaacaaa atgataaaat
    15001 gctagaagtt ttatcaaact ttaaatacta atagaaaagg gcaccacatg gtatgaatat
    15061 gtgccaaaat gcagtgtgaa ttatgaggtg agagcattta ttgtaaaaag caacaataga
    15121 tgatattgtt ttgtatcaat tgcttttttg ctatactgaa ttaatactga tattttgagg
    15181 agaagattaa aatgacccgt aaatcaatcg cgattgatat ggatgaagta ttggcagata
    15241 cattaggaga aatcattgat gctgtcaatt ttagagcgga tttaggtatt aaaatggaag
    15301 ctttgaatgg tcaaaaactt aaacatgtta ttcctgaaca tgatggatta attacagaag
    15361 tattgagaga accaggcttc ttcagacatc ttaaagtgat gccgcatgca caagaagttg
    15421 taaaaaaatt aactgaacat tatgatgtat atattgctac agcagcaatg gatgtaccaa
    15481 catcatttag tgataaatat gaatggttac tagagttctt tccattctta gatccacagc
    15541 attttgtttt ttgtggtaga aaaaacattg ttaaagctga ttatttaata gatgacaatc
    15601 ctagacagct tgaaattttt actggtacac cgattatgtt tacagcagtg cataatatta
    15661 atgatgatcg atttgaacgc gtaaatggtt ggaaagatgt agaacagtat tttttagata
    15721 atattgagaa ataaaaatat atcacttgaa gcattttatg tagcaaagat gatggatata
    15781 ctattatgaa gttgggactg gacgacgaaa taaattttgc gaaaatatca tttccgtccc
    15841 gctctcaata aatgttagtc tatctcatta ttataaatcg gatgaatgtg taaatctatg
    15901 gcagattaca cgtcatccga ttttttatag gatttgaaaa aggcgcataa accactatga
    15961 tttaaaatac aacatcaatc attttagtgg catgcgccaa aattatatgt ctgtttttga
    16021 aacagggtaa tagcttaaag ctaataaaaa cgaatataag gtgcgttgaa tcttatgatt
    16081 acactctaaa cctaatataa tatcccgtta agatcattcc ggatgcttac aaatcattga
    16141 cagtaagtaa ctgaatggca tttggtataa cctcaatatc aataggtgtt tctaatgaaa
    16201 tttcgccatc aatatcaact ttcattgctg gatctgttgt aagtgaaatc tttttaccag
    16261 gtatatgctc aataccttga gtaatttcat tccaattcat gctatcacgc tttttaaaaa
    16321 tatcatttaa aatactgaaa ctttgttcat taaaaatgaa agtgttcagt tcaccatctt
    16381 gaggagacaa atcagtcaat ggtatacgac taccaccaat gaatggacca tttgctgtaa
    16441 gtatcatggt cgtttcgcca gaatatgtct tatcatcaat tgataattga taattaaatt
    16501 gtgttggatt tagcagtgtt ttaacagttg atccaatata acttaattta ccaaatatat
    16561 cttttgaccc atcttgtacg ttttcagcgt tttgaacaat tagacctaag ccaacaaagt
    16621 tgagtgcata ttgattattt acttttatta catcgtatgt accaacttgt gcagaaatca
    16681 tttgttcact agcttgttta tgattaggtg caatatttag cgtttttgta aaatcattaa
    16741 aagtaccgcc tggtaaaatg ccgataggga gttgaagatt atgtgccata acaccattta
    16801 taagttcgtt aaccgtgcca tcaccgccaa gaataaataa tatatctaca tcttttgcat
    16861 agtttttagt tttgatttct tggcaatatt taataatgtc accttcgctt tcactcaatt
    16921 gaatagaaag atgcttacaa attgaactta atgctgttgt aacttcccca ataccttgat
    16981 taatattttt taatccactg tgttcatggt aaaagaggac accatgtgta tatttgtttt
    17041 ccatagttta gcctactttc taaaaattgg ttcattaaat atatataccc acttttaatt
    17101 gctaatacca aaaatatgtt tttaaataga gaaaatggta ataaatgaaa ttaatctcta
    17161 tagagtggga cgagaaaata tagttatagc tgtctataat gagcatatta agtttttatt
    17221 tatactgata acttgaattt aattaatgga aacctataaa aaaacagtaa gccatttaaa
    17281 tgacttactg ttttttaatt taggtcaaca atattaacga atacctttca ttgctttaat
    17341 aattaaaggt gagaatgcta atacaattgt tgtaacaata attgcaacaa cacctaagaa
    17401 aataaagtaa tttgtttgac ctagtggttc tattaactta actaatgtac cattgattgc
    17461 ttgtgcagaa gcgttagtta agtaccaaat actcatcatt tgggcattaa atgctttagg
    17521 tgctaactta acagcagcac tattacccgt tggtgataag catagctcac cgataacaca
    17581 aataatgtac gataaaataa cccagttaac tgagaagttt gatgaacctg atgcataacc
    17641 tacaatacca attagtatgt atgacgcacc tgctaagaac gtaccaattg caaattttac
    17701 tggcaggcta ggttgtttag ttccaagctt ttgccataaa agtgaaataa ttggagctaa
    17761 taataaaata aataatgggt taattgattg gaagatcgct tcaccaaagt ttgttttcca
    17821 accaaataag tttaatttca tatctgaatg ttcaattcca taaatgttta atacattaga
    17881 cccttgttct tgaatagccc agaacaccat tccaagaata aataatggaa taaatgcttt
    17941 aacacgagaa cgttcagtat cagtgacatc tttacttcta ataattaaag tgaagtaaat
    18001 gattggtaat gcaataccta atactaaaac agtattacta actaagttaa atgataatga
    18061 gttagttaat gcaccaataa cgataattaa tacaattgct aagacaacac ttccgataat
    18121 aagaccatac tttttctttt cagctggtgt caatgggtta gtaggtttca taccaacgct
    18181 acctaagttt ttgcggttga aaagtacata ccatactaaa cctaatgcca taccaactgc
    18241 tgcaatcaag aatccgccgt ggaagttttt aacattaaca aagtgttgca aaataatagg
    18301 tgataataat gcacccatat taactgacat atagaaaata acaaaacctg catccatacg
    18361 tctatcattt tcaggatata aacggccaac gatatttgaa atatttggct tcattaaacc
    18421 tgaaccaata atgatgaaga acattgatgt gaataagccg attaatgcaa atggtaagct
    18481 taaacaaata tgtccgataa taataaagac tgcacctaat aaagtagcgc ctctagtacc
    18541 tgtaattctg tcagcaatcc atccgcctgg tattgatgtc atatagatta atgaaccata
    18601 aactgacata attgacatag ctgttgtttt atcaattcca aggccattat ctgttacggc
    18661 aaagtacatg tagaaaatga gtagggcacg catgccataa taactaaacc tttcccagaa
    18721 ctctacaaag aagagtacac ctagtcctcg aggatgcccg aaaaatcctg tttgaggtat
    18781 gtcttgaatt tgatttccat gggagttttg ttgtgtcatt tatacatccc atcctttctt
    18841 cccctaatac aatagtttaa gtaaatttga ttgtacctta tcaactaaat attccaataa
    18901 atcacaaaaa aataaaaata ttgagaatat tctgttatta agcgcgcaca attaattaga
    18961 gataatataa aaatatactt attgacgtta aagtgcaata ggtttctata aaaatgttgt
    19021 ttaattagtg tattaatatt cttttggtgt actttgggat ttaatgattg aagttaattt
    19081 acaatatata ttaaaaaagc acatcaacaa gttggtagta accaacatac tgatgtgctt
    19141 tgaaaaggga aacaaattaa cggttatcta ttttttctgg atataaatca tgattcatta
    19201 gacgatgctc agccattttt tcatatttag aatttggacg tccatagttt gtataagggt
    19261 caatagaaat tccaccacgt ggtgtgaact tgccccaaac ttcaatataa tgtggatcca
    19321 taagctctat caagtcattc ataataatat tcatacaatc ttcgtggaaa tcaccgtgat
    19381 ttctgaaact aaataagtaa agtttcaacg attttgattc aaccatttta acatttggaa
    19441 tataagaaat gtagatagtt gcaaaatctg gttgcccagt aatcggacat aatgatgtga
    19501 attctggaca gttgaatttt acgaaatagt cgcgaccttg atgtttatta tcgaatgatt
    19561 ctaaaacatc aggacgatag tcaaaattgt aagtattgtc ttgatttcct aataaagtta
    19621 tatcttgtaa ttcatcttgt tgacggccat gtgccatata aagcgctcct ttaaatttat
    19681 ttttttatta ttttggcgtc tcggcgtgct ttttcaaaca tgtaataact tgcaccgata
    19741 ataacgacgt aacctaatgt tgcatagaaa tctggagatt ctccaaatag aataaatcca
    19801 agtattgctg taaaaattat agatgcatac gtgaaaatag aaatatcttt agcagcagca
    19861 aaactatatg ccaatgtaac accaatttga cccacagcgg cagctaagcc agcccctaat
    19921 agataaagta tttgcatctg actcattggt tcatatgtat atgcagtaaa tggtattaat
    19981 acgatgactg aaaataatga gaagtaaaat acaatggtgt atggtgcttc tctagtacta
    20041 agtgcgcgaa cacatgtata tgccgatgct gcaaaaatac ctgaaaatag tccagctagt
    20101 gatggaatca tagatgatga aaattcaggt ttcactatta aaagcatacc taaaatagca
    20161 attatcattg ctgttatttg atacttcctt accttttcat gtaagaaaac aatacttaat
    20221 aaaatcgtcc agaaaggatt gagtttcatt aatgaatcgg catcactaag taccatatgg
    20281 tcaatggcgt aaatatttaa taatacacct ataagtccaa gtgtcgaacg tgttaataat
    20341 aatggttggc ttgagagttt accaaacatt ggttgatgat atttatatat aaaaaataat
    20401 ggaataaaca ttgctactaa gtttcgtgct aatgattttt gaaaaacagg aagatcacct
    20461 gcaagtctga aaaacactga cataaaactg aaaccaatag ccgaaattaa aatggcaatg
    20521 atacctttta ctttaggatt caattttatc gcctctttta tataaaatta acgtatttat
    20581 attagcataa aacaacatgt tgtgcataaa tagttgaaat ttactataaa aagcctataa
    20641 tagactgtac cgaacaaacg ttctgtgttt atttgtcgga ataatagggc attacacttt
    20701 tatgaatgtt tgtgttatta cataaaacaa atatcaattc agtatcaagc taataagctt
    20761 tttcttaatt tctgttgata caattgagat tgacgcagat tttaaaaaat caagtgatat
    20821 ctactgaaaa aattttttta atttgttcaa gtttttctaa ttaagtattg gtgcctagtt
    20881 ggaacgtttt acgaacattc gattagaaaa tggcacttta aatcatagtg tgtcttatgt
    20941 ataatgaaac acataatata gtgttggtga aacaaaaaag acacaatatc ttgtgttttg
    21001 tatgcaaatg ctttatttat gaagaaatta catttaaaag taatttaaca cagaaattta
    21061 atagtcatta tcaattaata gtcatatttt tagaaaatgt actgagcaaa tggaagatat
    21121 ccaatgatgt aaacactaca tatagtgatt tttatacatt caacccatat aagctactat
    21181 tttctcaaat ataaatctat gcaattggtt tacatttgag aaaataagta gcttcattat
    21241 agttaataca atgctgagat aaccatagta accatgttgt taaagcattt tttaattgta
    21301 atgactactt tatttaaaag ggttgaagaa agaaggtgat ccaatgaaaa taatatattt
    21361 ttcatttact ggaaatgtcc gtcgtttcat taagagaaca gaacttgaaa atacgcttga
    21421 gattacagca gaaaattgta tggaaccagt tcatgaaccg tttattatcg ttactggcac
    21481 tattggattt ggagaagtac cagaacccgt tcaatctttt ttagaagtta atcatcaata
    21541 catcagaggt gtggcagcta gcggtaatcg aaattgggga ctaaatttcg caaaagcggg
    21601 tcgcacgata tcagaagagt ataatgtccc tttattaatg aagtttgagt tacatggaaa
    21661 aaacaaagac gttattgaat ttaagaacaa ggtgggtaat tttaatgaaa accatggaag
    21721 agaaaaagta caatcatatt gaattaaata atgaggtcac taaacgaaga gaagatggat
    21781 tctttagttt agaaaaagac caagaagctt tagtagctta tttagaagaa gtaaaagata
    21841 aaacaatctt cttcgacact gaaatcgaac gtttacgtta tttagtagac aacgattttt
    21901 atttcaatgt gtttgatatt tatagtgaag cggatctaat tgaaatcact gattatgcaa
    21961 aatcaatccc gtttaatttt gcaagttata tgtcagctag taaatttttc aaagattacg
    22021 ctttgaaaac aaatgataaa agtcaatatt tagaagacta taatcaacac gttgcaattg
    22081 ttgctttata cctagcaaat ggtaataaag cacaagctaa gcaatttatt tctgctatgg
    22141 ttgaacaaag atatcaacca gcgacaccaa catttttaaa cgcaggccgt gtgcgtcgtg
    22201 gtgagctagt gtcatgtttc ttattagaag tggatgacag cttaaattca attaacttta
    22261 ttgattcaac tgcaaaacaa ttaagcaaaa ttggtggcgg cgtagcaatt aacttatcta
    22321 aattgcgtgc acgtggtgaa gcgattaaag gaattaaagg cgtagcgaaa ggtgttttac
    22381 ctattgctaa gtcacttgaa ggtggcttta gctatgcaga tcaactaggt caacgccctg
    22441 gtgctggtgc tgtgtactta aatatcttcc attatgatgt agaagaattt ttagatacta
    22501 aaaaagtaaa tgcggatgaa gatttacgtt tatctacaat atcaactggt ttaattgttc
    22561 catctaaatt cttcgattta gctaaagaag gtaaagactt ttatatgttt gcacctcata
    22621 cagttaaaga agaatacggt gttacattag acgatattga tttagaaaaa tattatgatg
    22681 atatggttgc aaatccaaat gttgagaaaa agaaaaagaa tgcacgtgaa atgttgaatt
    22741 taattgcgca aacacaatta caatcaggct atccatattt aatgtttaaa gataatgcta
    22801 atagagtgca tccgaattca aatattggac aaattaaaat gagtaactta tgtactgaaa
    22861 ttttccaatt acaagaaact tcaattatta acgattatgg tattgaagac gaaattaaac
    22921 gtgatatttc ttgtaactta ggttcattaa acattgtaaa tgtaatggaa agcggaaaat
    22981 tcagagattc agttcactct ggtatggacg cattaactgt tgtaagtgat gtagcaaata
    23041 ttcaaaatgc tccaggagtt agaaaagcta atagtgaatt acattcagtt ggtcttggtg
    23101 tcatgaattt acacggttac ctagcaaaaa ataaaattgg ttatgagtca gaagaagcaa
    23161 aagattttgc aaatatcttc tttatgatga tgaatttcta ctcaatcgaa cgttcaatgg
    23221 aaatcgctaa agagcgtggt atcaaatatc aagactttga aaagtctgat tatgctaatg
    23281 gcaaatattt cgagttctat acaactcaag aatttgaacc tcaattcgaa aaagtacgtg
    23341 aattattcga cggtatggtt attcctactt ctgaggattg gaagaaacta caacaagatg
    23401 ttgaacaata tggtttatat catgcatata gattagctat tgctccaaca caaagtattt
    23461 cttatgttca aaatgctaca agttctgtaa tgccaatcgt tgatcaaatt gaacgtcgta
    23521 cttatggtaa tgcggaaaca ttttacccta tgccattctt atcaccacaa acaatgtggt
    23581 actacaaatc agcattcaat actgatcaga tgaaattaat cgatttaatt gcgacaattc
    23641 aaacgcatat tgaccaaggt atctcaacga tactttatgt taattctgaa atttctacac
    23701 gtgagttagc aagattatat gtatatgcgc actataaagg attaaaatca ctttactata
    23761 ctagaaataa attattaagt gtagaagaat gtacaagttg ttctatctaa caattaaatg
    23821 ttgaaaatga caaacagcta atcatctcgt ttaaaataac agatgattag tctgccatgt
    23881 ctatatttgt caattattga gagtaacatt acaggaggaa attatattca tgatagctgt
    23941 taattggaac acacaagaag atatgacgaa tatgttttgg agacaaaata tatctcaaat
    24001 gtgggttgaa acagaattta aagtatcaaa agacattgca agttggaaga ctttgtcaga
    24061 agctgaacaa gacacattta aaaaagcatt agctggttta acaggcttag atacacatca
    24121 agcagatgat ggtatgcctt tagtcatgct acatacgact gacttaagaa aaaaagcagt
    24181 ttattcattt atggcgatga tggagcaaat acacgcgaaa agttattcgc atattttcac
    24241 aacgttatta ccatctagtg aaacaaacta tttattagat gaatgggttt tagaagaacc
    24301 acatttaaaa tataaatcag ataaaattgt tgctaattac cacaaacttt ggggtaaaga
    24361 agcttccata tatgaccaat atatggccag agttacgagt gtatttttag aaacattctt
    24421 attcttctct ggtttctatt atccgctata tttagctggt caagggaaaa tgacgacatc
    24481 aggagaaatc attcgtaaaa ttcttttaga tgaatctatt catggtgtgt ttactggttt
    24541 agatgcacag catttacgaa atgaactatc tgaaagtgag aagcaaaaag ctgatcaaga
    24601 aatgtataaa ttgctaaatg acttgtattt aaatgaagag tcatacacaa aaatgttata
    24661 cgatgatctt ggaatcactg aagatgtgtt aaactatgtt aaatataatg gaaataaagc
    24721 actttcaaat ttaggttttg aaccttattt tgaggaacgt gaatttaacc caatcattga
    24781 gaatgcctta gatacaacaa ctaaaaacca tgacttcttc tctgtaaaag gtgatggtta
    24841 tgtattagca ttaaatgtag aagcattaca agatgatgac tttgtatttg acaacaaata
    24901 ataattaaaa ttaaaaagac cttcacatga aagggcaaag cgatgacatt cgcttccgac
    24961 atgttgaagg tcttttctct atgcttaaaa acgtatgcac attttgaaaa agtaaaaatt
    25021 gcatttaatg atgtcaatga ggctagaaag tatacaagat attgcattac aaaagggtgt
    25081 gctattttac tatatacatc taaaatacac atttacaaaa attgatttct attttaattg
    25141 caaatatcaa taaaatcgac aataaattat ttgaaaggct attgaaatga gtgacaaaaa
    25201 acgataccat taatgagaaa tgttatcaat gataataatt atcattaaat taaagggaga
    25261 aaattttgta atgaagtatt tattaaaggg aaaaattttg cttctattac ttatattgct
    25321 aacaatcatt tcgttgttta taggtgtcag tgaactgtct attaaagata tctttcattt
    25381 atcagactca cagcaaaata tattgttctc aagccgaata ccgagaacga tgagtatttt
    25441 aattgctggt agttcattag ctttagctgg cctaatcatg caacaaatga tgcaaaataa
    25501 gtttgttagt ccaactacag ctgggacgat ggagtggaca aaattaggta tcttaattgc
    25561 cttattattc tttccaactg gtcatatttt attaaaatta gtatttgctg ttatttgcag
    25621 catcggcgga acatttttat ttgttaaaat tattgatttt atcaaagtga aagatgtcat
    25681 ctttgtacca ctattaggga ttatgatggg tggcattgtt gctagtttta caacgtttat
    25741 ctcattacgt acgaacgcag ttcaaagcat tggtaactgg cttaacggga actttgccat
    25801 tatcacaagt ggacgttatg aaatcttgta tttaagtatt cctcttttag cattgacata
    25861 tctttttgcg aatcatttca caattgtagg aatgggtaaa gactttacca ataatttagg
    25921 tttgagttac gaaaaattaa ttaacatcgc attgtttatt actgcaacta ttacagcatt
    25981 ggtagtggtg actgttggaa cattaccgtt cttaggacta gtaataccaa atattatttc
    26041 gatttataga ggcgatcatt taaaaaatgc tatccctcat acgatgatgt taggtgccat
    26101 ctttgtattg ttttctgata tagttggcag aattgtagtt tatccttatg aaattaatat
    26161 tggtttaaca ataggtgtat ttggaacaat cattttcctt atcttactta tgaaaggtag
    26221 gaaaaattat gcgcaacaat aataaaaaaa taatgctttt aattgtagtc acgttcttaa
    26281 ttagtatgct gtacttattt gttggtattg attttgaaat atttgaatat caattttcaa
    26341 atcgtttaag aaagttcata ttaattattt tagtaggtgc tgccattgca acatccgttg
    26401 ttattttcca agcgattaca aataatcgtt tattgacacc atcaataatg ggattagatg
    26461 cagtttattt atttatcaaa gtattgccag tctttttatt tggaattcaa tcggtgtggg
    26521 ttactaatgt atatttgaat tttatattaa cacttataac gatggtgtta ttcgcactaa
    26581 tcctattcca aggtatcttt aaaattggac atttttcaat ttattttatc ttacttattg
    26641 gtgtcctttt aggaacattt tttagaagca ttacaggttt tattcaattg attatggatc
    26701 ctgaatcatt tttagcaata caaagtagta tgtttgctaa ttttaatgcc tctaattcga
    26761 atttagtttc tttttcagca gtattattag taatcttatt agtcattaca atttttctat
    26821 tgccgtattt agatgtattg cttttaggtc gtgctgaagc aattaatctt ggtatatcgt
    26881 atgaaaaatt aacgcggatt ctacttgtaa tagtttctgt cttagtttct gtgtcaactg
    26941 cattagtagg accaattaca tttttaggct tattgactgt aaatctagcg catgaactaa
    27001 tgaagacgta tgaacataaa tatatattaa tcgcgacaat ttgcttgagt tggattagtt
    27061 tatttagtgc gcaatgggta gttgaaaatg tgtttgaggc tacgacagaa atgagtatac
    27121 ttattgattt aattggtgga agttatttca tttatctatt agttagaagg agaaatgcgc
    27181 aatgattcaa gttggaaatt taactaaaac tataaataat caaatgatat tggacgatat
    27241 tagcatagaa attgaaaaag gtaagttgac ttctttaatt ggacctaatg gagcagggaa
    27301 gagtacgtta ctttcagcga tatgtcgctt aattcggttt gatgaagggg aagtaaaaat
    27361 agatggacag cttatgtctg attataaaaa caatgatttg tcgaaaaaga tatcgatttt
    27421 aaagcaaacg aaccatacag aaatgaacat tactgtagaa caattagtta atttcggacg
    27481 attcccttat tctaaaggac gtttaacgaa agaagatcat gaaattgtta atgatgcttt
    27541 agatttgttg caattacaag atattagaaa gcgtaatata aaatcattgt ctggtggaca
    27601 acgtcaacgt gcctatatag cgatgaccat tgcacaagat actgaatata ttcttttaga
    27661 tgaaccgtta aataatttag atatgaagca tgctgttcaa attatgcaaa cgttaaaaat
    27721 gttagcacat aaaatgaata aagcgattgt cattgtgtta catgatatta actttgcgtc
    27781 ctgttattca gatcaaattg tagcactgaa aaacggacaa ctagttaaat cagatttgaa
    27841 agataatgtc attcaaagta gtgttttaag tgatttatat gacatggata ttcaaattga
    27901 acatataaaa aatcaaagga tttgtttata ttttaaggat tgataattcg gaaacacttt
    27961 aaaggggtga tgcaccaatt aaagaaagtt taactataaa tcatttattt atttttcaca
    28021 tcaagcacac agattaagcc aaaagaggag aaaattatat tatgaagaaa acagtcttat
    28081 atttagtagt agcagtaatg tttttattag cagcatgtgg taacaattct gataaagaac
    28141 aatcaaaatc agaaactaaa ggttctaaag atacagtgaa aattgaaaac aactataaaa
    28201 tgcgtggcga gaaaaaagat ggtagcgatg ctaaaaaagt taaagaaact gttgaagtac
    28261 caaaaaatcc taaaaatgca gttgtattag attatggtgc attagatgta atgaaagaaa
    28321 tgggcttatc agacaaagta aaagcattac ctaaagggga aggcggcaag tcattaccga
    28381 acttcttaga gtcatttaaa gatgacaagt atacaaatgt tggtaacttg aaagaagtta
    28441 atttcgataa aattgcagca acaaaaccag aagtaatctt tatctcaggc cgtacagcta
    28501 atcaaaagaa tttagatgaa ttcaaaaaag ctgcaccaaa agcaaaaatt gtttatgttg
    28561 gtgcagatga aaagaactta attggttcaa tgaaacaaaa cactgaaaat atcggtaaaa
    28621 tttacgacaa agaagataaa gctaaagaat taaataaaga tttagataac aaaattgcct
    28681 caatgaaaga taaaactaag aagttcaaca aatcagttat gtatttatta gttaatgaag
    28741 gtgaattatc tacttatgga cctaaaggtc gtttcggtgg attagtttac gatacattag
    28801 gtttcaacgc ggttgataaa aaagtaagca atagtaacca cggacaaaat gtctctaacg
    28861 aatacattaa taaagaaaat ccagatgtta ttttagcaat ggatagagga caggctgtaa
    28921 gtggtaaatc aactgcgaaa caagcattaa ataatcctgt attaaaaaat gttaaagcaa
    28981 ttaaagaaga caaagtttat aatttagatc ctaaattatg gtactttgca gctggatcaa
    29041 ctacaactac aattaaacaa attgaggaac ttgaaaaagt tgtaaaataa ttttaaaagt
    29101 ggggaacaat ggttaaaggt cttaatcatt gttccccact tttcttttaa aaaaggaatc
    29161 tgggacgtta atcaatgtcc tagactctaa aatgttctgt tgtttgtcgt tggttgaatg
    29221 aacatgtact tgtaacaagt tcatttcaat accagtgggc tcccaacata gagaaatttg
    29281 atttccaatt tctactgaca atgcaagttg gcggggccca aacatagaga atatcaaaaa
    29341 ggaattctat agaagtggtg ctttatcatg tctgtcccac tccctataat gttttggcta
    29401 tgttgtttaa atttcgaaat aaatatgata atgatatttg cagcgattgt taaatcgaga
    29461 ttgacaattt ggacaacgtt caaccatcat atattcattg attgttaatt cgtgtttgca
    29521 tacaccgcat aagattgctt tttcgttaaa tgaaggctca gaccaacgct taatggcgtg
    29581 cttttcaaac tcattatggc acttatagca tggatagtat ttattacaac atttaaattt
    29641 aatagcaata atatcttctt cggtaaaata atggcgacag cgtgtttcag tatcgattaa
    29701 tgaaccataa actataggca tagacaaagc tccttaactt acgattcctt tggatgttca
    29761 ccaataatgc gaacttcacg atttaattca atgccaaatt tttctttgac ggtcttttgt
    29821 acataatgaa taaggttttc gtaatctgta gcagttccat tgtctacatt taccataaaa
    29881 ccagcgtgtt tagttgaaac ttcaacgcct ccaatacggt gaccttgcaa attagaatct
    29941 tgtatcaatt tacctgcaaa atgaccaggc ggtctttgga atacactacc acatgaagga
    30001 tactctaaag gttgtttaga ttctctacgt tctgttaaat catccatttt agcttgtatt
    30061 tcagtcattt taccaggagc taaagtaaat gcagcttcta atacaactaa gtgttctttt
    30121 tgaataatgc tattacgata atctaactct aattcttttg ttgtaagttt aattaatgag
    30181 ccttgttcgt ttacgcaaag cgcatagtct atacaatctt taacttcgcc accataagcg
    30241 ccagcattca tatacacagc accaccaatt gaacctggaa taccacatgc aaattcaagg
    30301 ccagtaagtg cgtaatcacg agcaacacgt gagacatcaa taattgcagc gccgctaccg
    30361 gctattatcg catcatcaga tacttcgata tgatctagtg ataataaact aattacaatg
    30421 ccacgaatac caccttcacg gataataata tttgagccat tgcctaaata tgtaacagga
    30481 atctcatttt gataggcata tttaacaact gcttgtactt cttcattttt agtaggggta
    30541 atataaaagt cggcattacc acctgtctta gtataagtgt atcgttttaa aggttcgtca
    30601 actttaattt tttcatttgg gataagttgt tgtaaagctt gatagatgtc tttatttatc
    30661 acttctcagt acatcctttc tcgtgtcttt aatatcatat agtattatac caattttaaa
    30721 attcatttgc gaaaattgaa aagaaagtat tagaattagt ataattataa aatacggcac
    30781 tattgtcgtt ataagtattt tttacatagt ttttcaaagt atttttgctt ttgcatctca
    30841 tattgtctaa ttgtaaagct atgttgcaat atttgatgct ttttagtatt gaattgtaaa
    30901 gcaatctcat cattagtcga taagagataa tcaagtgcaa gataagattc aaatgtttgg
    30961 gtattcattt gaatgatatg tagacgcacc tgttgtttta gttcatgaaa attattaaac
    31021 ttcgccatca taactttctt attatattta tgatgcaagc gataaaaccc aacataattt
    31081 aaacgttttt catctaagga tgtaatatca tgcaaatttt ctacacctac taaaatatct
    31141 aaaattggct ctgttgaata tttaaaatga tgcgtaccac caatatgttt tgtatatttt
    31201 actgggctgt ctaagaggtt gaataataat gattcaattt cggtgtattg tgattgaaaa
    31261 caattagtta aatcactatt aatgaatggt tgaacatttg aatacatgat aaactccttt
    31321 gatattgaaa attaatttaa tcacgataaa gtctggaata ctataacata attcattttc
    31381 ataataaaca tgtttttgta taatgaatct gttaaggagt gcaatcatga aaaaaattgt
    31441 tattatcgct gttttagcga ttttatttgt agtaataagt gcttgtggta ataaagaaaa
    31501 agaggcacaa catcaattta ctaagcaatt taaagatgtt gagcaaaaac aaaaagaatt
    31561 acaacatgtc atggataata tacatttgaa agaaattgat catctaagta aaactgatac
    31621 aactgataaa aatagtaaag aatttaaggc actacaagaa gatgttaaaa accatctcat
    31681 acctaaattt gaagcatatt ataagtcagc aaaaaatttg cctgatgata caatgaaagt
    31741 taagaaatta aaaaaagaat atatgacgct tgcaaatgag aagaaggatg cgatatatca
    31801 attaaaaaaa ttcataggtt tatgtaatca atctatcaag tataacgaag acattttaga
    31861 ttatacgaaa caatttgaaa aaaatagata caaagttgaa tcagaaatta aattagctga
    31921 taataaaagt gaagcaacta atcttacgac aaaattagaa cataataata aagcgttaag
    31981 agatactgcg aagaagaacc tagatgatag taaagaaaat gaagtaaaag gcgcgattaa
    32041 aaatcacatt atgccaatga ttgaaaaaca aattaccgat attaaccaaa ctaatattag
    32101 tgataagcat gttaataatg caaggaaaaa cgcaatagaa atgtattaca gtctgcagaa
    32161 ctattataat acacgtattg aaacaataaa ggttagtgag aagttatcaa aagtcgatgt
    32221 agataagttg ccgaaaaagg gtatagatat aactcacggc gataaagcct ttgaaaaaaa
    32281 gcttgaaaaa ttagaagaaa aataactata atcatttttc aaagttaaaa attttgaatt
    32341 tatggttaac atgtcaactt actatgtgta taatggtaaa cattgatatt aactatatgt
    32401 ataaaaatgt cacgcagatg ctatttaaat gtgataaata tttttagagg tgaatagagt
    32461 ggctataaag ctaagttcaa ttgaccaatt tgaacaggtt attgaggaaa ataaatatgt
    32521 ttttgtatta aaacatagtg aaacttgtcc aatatcggca aatgcgtacg atcaatttaa
    32581 taaattttta tatgaacgcg atatggacgg ttattatttg attgtccaac aagaacgcga
    32641 tttgtcagat tatattgcta aaaaaacgaa tgttaaacat gaatcacctc aagcatttta
    32701 ttttgtaaat ggtgaaatgg tttggaatcg agaccacggt gatattaatg tgtcgtcatt
    32761 agcacaagca gaagaataat gaaaatatag ggttggaaca ttttgcctta cactactaga
    32821 cgtgaatagc acaacttaaa ttcgtgtgaa tcagggtagt tcggctataa tgatgttctg
    32881 accttttatt ttttgtaact tatagaagta gttaagttag tactttttta caaacatatg
    32941 tataatgtat tcgagtattt ttattgaaaa tattttggaa aacgacgaat ccaataagaa
    33001 aatttaaaca tgatttgtaa gttagtttaa taggaaatac atgctaagcc agaagaaaca
    33061 tactgttatt tactggaata attaataatc atgtcatgta aaatgttcgc atataatcac
    33121 gagataaaat ctaaaattta agattaatct tttaagaata aaaaacgtat cacaacaaat
    33181 aataaagtaa ggtggtcaag gttatgaaag tattagtagc catggatgag tttcatggaa
    33241 ttatttcgag ttatcaagct aatagatatg ttgaagaggc agttgcaagc caaattgaaa
    33301 ctgcagatgt agttcaagta ccattgttta atggaagaca tgaattatta gattctgtat
    33361 ttttatggca atctgggcaa aagtatcgta taccagtaca tgatgcagat atgaatgaag
    33421 ttgaaggtgt ttacggacaa actgatacag ggatgaccgt tatcgagggg aatttatttt
    33481 taaaaggtaa aaaaccaatt gttgaacgaa caagttatgg tttaggagaa atgattaaac
    33541 atgcattaga taacgacgca aaacatgttg taatttcact aggtgggatt gatagttttg
    33601 atgctggtgc aggtatgtta caagcattag gtgctcaatt ctatgatgac gaagggcgtg
    33661 tcgtagatat gagacaaggt gctggtgtaa ttaaatatat tcgtcgtatg gatatgtcaa
    33721 acttacaccc taaaatggaa acagcaagaa ttcaagtaat gtcggatttt tcaagtcgat
    33781 tatatggtaa gcaaagtgaa atcatgcaaa cttatgatgc gcatcagttg aatcataatc
    33841 aagcagcaga aatcgataat ttaatttggt attttagtga gttatttaaa agtgaattga
    33901 aaattgcaat tggtccagtt gaacgtggtg gtgctggtgg tggaattgca gcagtcttga
    33961 atggactgta tcaagctgaa atattaacca gtcatgcatt agtagaccaa ctaacacatt
    34021 tagaaaattt agttgaacaa gcggatttaa ttatttttgg agaaggatta aacgaaaatg
    34081 atcagttgct agaaacgaca acattgcgta ttgcagaact ttgtcataaa catcaaaagg
    34141 ttgccattgc aatttgtgca actgctgaaa agtttgattt atttgaatca caaggggtta
    34201 cagcaatgtt taataccttt atcgatatgc cggaaagtta tactgacttt aaaatgggat
    34261 tacaaattag gcattatact gttcagtctt taaaactgtt gaaaacacat tttaatgttg
    34321 aggtttagta aagaaggact aaattggtga tgctgtcatg atggttaata acatttatga
    34381 tggttagcaa aacgaattag aagatcgaaa gtatacgtaa aaaatatgaa aaatcacgct
    34441 atcattgcac tgaatgttag cgtgattttt tatattaatt aagcttgagt tgaactagta
    34501 tataatcgtt tgtttttagt gattttcagc gatatcttct acaattccaa tgattacttg
    34561 tactgctttt tccatgacat caatggatgc atattcatat gggccgtgga agttaccgca
    34621 acctgtaaag atgtttggag ttggtaaccc cataaatgac aattgtgaac catctgtacc
    34681 accgcgaata ggttcagtgt ttgctggaat atctaatttg gcaaagacac gtttaggtat
    34741 atcaataata tgaggcaatg gtaatatttt ttctgccata ttgaaatatt gatccgatat
    34801 atcaacttta actggataat tttcaaaatg ggcattgata tcgtcacgta tttctaaaat
    34861 acgtttctta cgcaattcga attgtttttt atcatgatca cgaataatgt attgcaaagt
    34921 tgctttttca acagttcctt caaagttcat taagtgataa aagccttcgt atccttctgt
    34981 tcgctccgga acttcactat caggtagcaa actatcgaat tgttcaccta aacgtattgc
    35041 gtttaccatt gcatttttag ctgaaccagg atgtacattc acaccgtggc atgtaataat
    35101 cgcttcagca gcgttaaagc tttcatattg taattctcca tattgactac catccatagt
    35161 ataagcaaaa tcggcattga agcggtcaac atcaaattta tgtggaccac gaccgatttc
    35221 ttcgtctggt gtaaatccaa tgcgaatggt accatgttta atttctggat gttcttgtaa
    35281 ataacaaata gcttccataa tttccacaat acccgcttta tcgtctgcac ctagtaacga
    35341 tgtaccatca gttaccatta atgtatgacc aactaaactg ttaagttctg gaaatacttt
    35401 aggatctaag acacgtttag tattgcctag tttgtatggc ttaccatcat agttttcaat
    35461 aatttgcagt ttaacatttg aagcattgaa atcaggtgat gtatcaacat gcgccaaaaa
    35521 tccaactgtt gggacgtcga catcgatgtt actttctaat gtagcaaata agtagccatt
    35581 ttcatctaaa tcagttggca atcctaattg ttgtaattct ttttctaata aatgtaacaa
    35641 atcccattgc ttttcagttg aaggtgttgt tgtagatttt ggatcagatt gcgtatcaat
    35701 tgtcgtatat cttgttaatc tatctatcaa ttggttcttc attatattcg accccttaaa
    35761 ctctattatt catgttgtaa gattttttat atgtcttacc tttgatttta ccatacagtt
    35821 gtttgatacg tgtgtatagg taatatagaa tttcagaaac taatataccg aaagcaatcg
    35881 cacctgaaat cagtgtaact tctaaaaatg tatttacagc acttgtataa tcattcgata
    35941 ctaaaaaacg agtcgcttga taagctgcac caccaggtac taatggtata atgcctggca
    36001 ctatgaatat aattaccggt cgtttatatc tgcgactcat agtatgactc attaagccta
    36061 aaattaagct tcccaaaaat gaagcgccaa cttttccaaa ctctaaatct accgttaatt
    36121 ggtaaatcgt ccatgcaatg gcacctacaa atccacatgc tactaagaga cgtttgggtg
    36181 cattgaaaat gatagagaaa agtactgttg atataaagct gattgtaaaa tgaaataaat
    36241 aaaatagcat gctttaacag tccttcctta aatgattaat aaaacgatag cgacaccagc
    36301 accgattgcg aatgctgtta atgcagcttc aacaccgcga gacatacctg caagtaattc
    36361 acccgctaat aaatctcgaa tggcattggt aattaatata ccagggacaa gtggcatgac
    36421 actggctata gtaatgatat cttgattggt tgcaatacct aatttagtaa atgtagctgc
    36481 aattgatatg accacagcgg ctgcaacaaa ctctgagaaa aatttaattt gtatatagcg
    36541 ttgcacaaag ctgaatgtta aaaatgcgga tccaccagca atgactgcaa tccaacaatc
    36601 tgatgcgaca cctccaaaca taaataggaa gaagccacat gcaatggcag ctgcaaagaa
    36661 attcgttaaa aaagaatatt gtaatgatgc atgctgtaaa tgaataaatt cagatttagc
    36721 ttcatcaatt gtgagttctt tatttgatat tttacgtgaa agactattcg ttaaagcgat
    36781 tttctctaaa tctgttgtac gctcttgtac acgaattaat cttgtacttg ttcgatcgtt
    36841 taatgaaaaa ataattgcag ttgaactgac aaaactatat gtattatgaa gaccataact
    36901 atgtgcgata cggttcattg tatcttcaac tcgatatgtt tcagcacctg attcaagtaa
    36961 aattctacct gcaattaata caacatcaat cactttgttt tcatctataa ttgtgattga
    37021 atctggcata tcaattcacc tccaatgata tgtgttattt atttgaacaa ttgaagttta
    37081 caacttgttg ttgcaacttt caatagtgag actttatgtt agtatgatga acttgtatgg
    37141 ttcaaattta aataagaaaa actgttaatc tttgctatta tactatgatt taataatagc
    37201 aaaggattaa cagttttgtc gttgttataa attgataata gggttaaaca ttactttgtt
    37261 tcgcccttga tttttggcta catgcaccat atcgtctgca tctttaaaca ctttacgctg
    37321 tgattttgga tcgtcatctg ttaaataacc aacaccgata gatactgaca atttaataac
    37381 ttctttgttt ggtaaatgga atgatgattt ttcaacaccc gaacgaatat tttcagctaa
    37441 tttaacactt tgatcaagtg aataattgtg aatgacaact gagaactctt cgccaccatt
    37501 tctaaaaatt ttaaattgat tcggcacata gtttttaagt aattgagaca tttgttttaa
    37561 tacagcatca cctgatttgt gtgagtaggt atcattgaca tctttaaatc catcgatatc
    37621 gattaataat aatgcgatac tttgatgttc tttttcagct tttcgtgaaa tttcatttaa
    37681 atgtctatca aattctttta cattgcctaa gcctgttaag taatcatatt tatcttcgtt
    37741 ttcataacga tttacgagtg agaagaaatg ccaaatatcg acaaatgtta tcgcagaagc
    37801 taaagtgata attaatgaaa ttggtattaa aatgataact tccgatagtg tgtaaatagg
    37861 actcactaat gcgacaccaa ataaaatgat tattgtaaca acattaagta ttaataatga
    37921 tagcacatca ttttgtttta aaaatggtcc aatagcactt gttactgcgg caattacaat
    37981 caacgtaaca ccgtacataa tcgagttgtt aaatactaca atttcaacaa ttgctacaat
    38041 tactgtggca gataatgtat agaccatatt tgtaaatcta cctaaaaaca ataaaggaac
    38101 gaatgttaag tgaattaaat aatcttcacg ataagggata gggtagacag ataataataa
    38161 tgatacgatt gtcattaaaa cagtgacata agccttagaa aaaaccatac gtttgttttc
    38221 tgaatactgt aagcgatgga ataaatagat tccagcgact ataacagata tattgtatat
    38281 aaatgcttcg aacatgtctg aatcgactcc tttaattgac cactagctat tgtaagtgaa
    38341 aacttacaat ttgtcattag tttacatata aaattaatgt atgatataga ctttgatgtt
    38401 aaaatgttgc cttaaatgat atgatgaaaa aatgaataat aggcgatata taagaaatga
    38461 atcgtatagt tgtaaatatg atatcattaa ttgagcgaat taatttataa taaagctata
    38521 agatatacga agaaaataga tatatcattc tataaagaca atattaaata aatataacgt
    38581 taaaaacaat taatatcgat gaaggtgaat aaatggttac attattacta gttgcagtaa
    38641 caatgattgt cagtttgacg ataacaccaa ttgttattgc aatatcgaaa agattaaatt
    38701 tagttgataa accaaatttt agaaaagtac acactaaacc tatttcagtt atgggtggta
    38761 cagtgattct cttttcattt ttaataggta tttggattgg tcatcctatt gaaacagaaa
    38821 tcaaaccact tattattggt gcgattatta tgtacgtact tgggcttgta gatgatatct
    38881 acgatttgaa accgtatata aaattggctg gtcaaattgc cgctgcctta gtagttgctt
    38941 tttatggtgt gactattgat tttatttcgt tgccaatggg tacaacgatt cattttggat
    39001 ttcttagtat tccaattact gtgatttgga ttgttgctat tacaaatgca attaacttaa
    39061 ttgatggact cgatggtttg gcgtcgggtg tttctgcaat aggactcatt acaataggat
    39121 tcattgcaat tttacaagct aatattttca taacgatgat ttgttgtgtt ttattaggct
    39181 ctttaattgg gtttttattt tacaatttcc atcctgccaa aatattttta ggtgatagtg
    39241 gggctttaat gattggattt atcatcggat tcctttcttt gctcggattc aaaaatatta
    39301 caattattgc attgttcttc ccaattgtta tcctagcagt gccattcatt gatactttgt
    39361 tcgcaatgat tcgacgtgtg aaaaaagggc agcatataat gcaagctgat aaatcgcatt
    39421 tgcatcataa actattagca ttaggctaca cacatagaca aacagtatta ttaatctatt
    39481 caatctctat tttatttagt ctttcgagca ttatcttgta tgtatcgcca ccattaggtg
    39541 ttgtattaat gtttatatta atcatattta gcattgaatt aattgttgaa tttacaggat
    39601 taatagataa caactaccga ccaatattaa atttaattag tcggaaatcg tcacacaaag
    39661 aagattagat tttaaaacgg taagtaataa aataaaaaat gatgtctgta cttttatgtt
    39721 gttataaagg aaggcatact cacaaaaaac actagcatgg aacgtgcttt caaaattgca
    39781 aagtaacaat acgcaattag agttagccat cctaagctag tgtttttatt tttattcagt
    39841 tggtatatcg aaaggtaact gctttggagt ttcttcagtc aaatcgaaat ttccagcagt
    39901 catttgattt aaaaagttaa taaacgcttc atagtcactt ttaacgacat cgatatagta
    39961 gcttacctta tcagtgtatg tttggtttct taacataaaa tgagttgaag ctaattcata
    40021 ttcaaattta ccagtttgat cataattcag tgttactata catggtactg cttctcgtag
    40081 ttcgacacgt ccgacatcat aaatgacgtc tctaacagca ccgctatagg cgcgaattaa
    40141 accgccgcca cctaatttaa taccaccaaa atatcttgtt actacgacac acgcattatg
    40201 aacatcgagc ttttttaata tgtctaacat tgggacaccg gcagttcctg tcggttcacc
    40261 atcatcattc gctttttgaa tattcatttc aggtccaata gtatatgcag aacaattatg
    40321 agtggcatct ttatgttctt tttttattgc agcaataaat gctttagctt catcttcatt
    40381 ttgaacaggt ttgatatgag caatgaattt tgatttacta atcacatttt caataatgtg
    40441 ttctttttta acagtaatga tattttgtgt cataataact ccttaattca taagcttaag
    40501 attatttaat cttcattata cactgaaaat gacatgacta taaatcgttt gattgccatt
    40561 ttctttttaa ctgaaatatt gtatcattgt tatgagtata ttttaggagg acgactatga
    40621 aaattgctgt gatgaccgat tctacaagtt atctgtcgca ggacttaatc gataaatata
    40681 atattcaaat agcgccatta agtgtgactt ttgatgatgg gaagaacttt acagaaagta
    40741 atgaaatagc aattgaagaa ttttataata aaatggcatc gtctcaaacg attccaacaa
    40801 caagccaacc agcaattggc gaatggatta ctaaatatga aatgctaaga gatcaaggtt
    40861 acacagatat cattgtcatt tgcttatcaa gtggaattag tggaagttat caatctagtt
    40921 atcaagcagg ggaaatggtt gaaggtgtta atgtacatgc atttgatagt aagcttgcag
    40981 caatgattga aggttgttat gtattacgtg ctattgaaat ggttgaagaa ggatacgaac
    41041 cacagcaaat tattgatgat ttaactaata tgcgtgaaca cactggtgca tatttaattg
    41101 ttgatgactt aaagaattta caaaaaagtg gtcgaattac tggtgctcaa gcatgggttg
    41161 gaacattatt aaaaatgaag ccagttctta agtttgaaga tggcaagatt ataccagaag
    41221 aaaaagttcg tactaaaaag cgtgccattc aaacattaga aaagaaagtg ttagacattg
    41281 taaaagactt tgaagaagta actttatttg tcataaatgg agatcatttt gaagatggtc
    41341 aagcgttata caaaaagtta caagaagatt gtccttcagg ttatcaagta gcatactctg
    41401 agtttggtcc agttgttgca gcacatttag gttctggtgg attaggttta ggctatgttg
    41461 gcagaaaaat aagattaaca taattataaa attttaataa aagagtctat attgtaattg
    41521 gaaattatct cttgcataca tggctttaaa tgttcatcat ttgaatgtca aaatgctaaa
    41581 gatataagaa aatcattata atattagact cttttttacg ttgaaatgag gttttaagca
    41641 ttaaacatta cgggaaatta attcatcctc atacttcact tactaatgaa aaaattaaaa
    41701 aagaagtaac aggtgtcatc aaacaaaatt caaactatta ttgtgttcaa tgtgaaagta
    41761 caaatccaaa gcatttttat cagtatgatt cctcagtaca ttccaaaaaa attgtatatt
    41821 gcagaaattg tatatcactg ggtcgaatgg ataatgtaac aagatataaa ataacagaga
    41881 gttcgcaaag ttcatcacaa gcctattatc atctctcatt tgaattgtcg gaacagcagt
    41941 cttatgcctc agaacatatt gttcgagcca ttagaatgag acaaacgatt ttgttatatg
    42001 cagtaacagg tgcaggtaag acagaaatga tgtttcaagg cattcaatat gcaagacgac
    42061 agggagataa tatagctatt gtgtcaccac gtgtagatgt tgttgtagaa attagtaaac
    42121 gtattaaaga cgcatttctt aatgaagata tagacatact acaccagcaa tcaagtcaac
    42181 aatttgaagg gcattttgtt gtatgcacag tgcatcaact ttaccgattc aaacagcact
    42241 ttgatactat ttttattgat gaagtcgatg cctttccttt atcaatggat aaaagtttac
    42301 aacaagcatt gaagtcatct tctaaagttg aacatgcaac aatttatatg acagcaacac
    42361 caccgaaaca acttctgtca gagattcccc acgaaaatgt aattaaattg ccagctcgct
    42421 ttcataaaaa atcacttcca gttcctaaat atcgctattt caaactcaat aataataaga
    42481 ttcagaaaat gttatatcga attttacaag atcaaattaa taaacaacgt tatacactgg
    42541 tgttttttaa caatatagaa acaatgatta aaacattttc ggtttataag cagaaaatta
    42601 ctaaattaac atatgtccat agcgaggatg tttttcgctt tgaaaaagtt gaacaattaa
    42661 ggaatggaca atttgatgtc atttttacta cgacaatatt agaacgtgga tttacaatgg
    42721 caaatttgga tgtggttgtt atcgatgcgc atcaatatac tcaagaggct ttaatacaaa
    42781 ttgctggacg tgttggacga aaattagaat gtcctactgg aaaagtattg ttttttcatg
    42841 aaggagtaag tatgaatatg attcaagcta aaaaagagat tcaaaagatg aacaaattag
    42901 cattaaaaag aggttggatt gatgaataat tgtttgagtt gtggtgctaa gttatatgaa
    42961 aatataacca tttataattt gttcaagaaa cctaatagat tatgtgacag atgcaaagag
    43021 aattgggaca atattaaact tgatattaaa gcaaggcgat gttcaagatg cttaaaatac
    43081 ttaaatcaaa atgaagcgta ttgtttagac tgcaagtttc tatcggcaca ctttaattta
    43141 atggaacaat tatattgtca atttcaatat gatggtttaa tgaaagagat gatacatcag
    43201 tataaatttt tgaaagacta ttatttatgt gaattattgg cacatttgat tgaaatacca
    43261 caaacatctt atgactatat tgtgccaatt ccttcttcgc cggcacatga tttatctaga
    43321 acatttaacc cggtagaagc agtactaaaa gctaaaggga ttcgctttga taagatttta
    43381 aagatgtcaa atagaccaaa acagtctcat ttaactaaga aagagcgtct ggcagatgaa
    43441 aatccattta ttattgatac ggaattagat ttgaacggca aggaaatatt actcgttgac
    43501 gatatttata caactggatt aacaattcat cgtgcagggt gtaaattata tgctaaaaat
    43561 atcagaaaat tcaaagtgtt tgcgtttgca cgatagcgta aaaatgttaa aatataataa
    43621 agagttacca ataaagaggt ttaaggagag attactatga ttagatttga aattcatgga
    43681 gataacctca ctatcacaga tgctattcgc aactatattg aggaaaaaat tggtaagttg
    43741 gaacgttatt ttaatgacgt accaaatgca gtggcgcatg ttaaagttaa aacttattca
    43801 aattcagcta ctaaaattga agtaacaatt ccattgaaaa atgttacgtt aagagctgaa
    43861 gagcgaaacg atgatttata cgcaggtatt gatttaatta ataataaact tgaaagacaa
    43921 gttcgaaaat ataaaacacg tattaatcgt aagagccgtg atcgaggaga tcaagaagtg
    43981 tttgttgccg aattacaaga aatgcaagaa acacaagttg ataatgacgc ttacgatgat
    44041 aacgagatag aaattattcg ttcaaaagaa ttcagcttaa aaccaatgga ttcagaagaa
    44101 gcggtattac aaatgaatct attaggtcat gatttctttg tattcacaga cagagaaact
    44161 gatggaacaa gtatcgttta ccgccgtaaa gacggtaaat atggcttgat tcaaactagt
    44221 gaacaataaa ttaagtttaa agcacttgtg tttttgcaca agtgcttttt ttagacttca
    44281 aaagcaattt ctaactattt cacagttcgt ttgtgcaatt tgttgaatga aacatagtga
    44341 ctatgctaat gttaatggat gtatatattt gaatgttaag ttaataata
//
LOCUS       DAKPJH010000008        42788 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.008, whole genome shotgun sequence.
ACCESSION   DAKPJH010000008 DAKPJH010000000
VERSION     DAKPJH010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 42788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42788
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.008"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            13..1197
                     /gene="rocD"
                     /locus_tag="OY092_000358"
     CDS             13..1197
                     /gene="rocD"
                     /locus_tag="OY092_000358"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HCX1075333.1"
                     /translation="MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCIS
                     GFSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNS
                     GTEAVEAAIKIARKWGSEVKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHP
                     LLQGTTTVDFGDIEQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQI
                     LLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTP
                     GTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKALLQLKHPSIKEIRGR
                     GLFIGIELNTDAAPFVDQLIQRGILCKDTHRTIIRLSPPLVIDREEINQIVAAFQDVF
                     KN"
     gene            1236..2267
                     /locus_tag="OY092_000359"
     CDS             1236..2267
                     /locus_tag="OY092_000359"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HCX1075334.1"
                     /translation="MIKVGIVGGSGYGAIELIRLLQTHPHITIAHIYSHSKVDEPLKL
                     TFPHLQHIMQHFEALTVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIK
                     NREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNNGTKLISNPGCFPTATLLALHPLI
                     SEKIVDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSI
                     VAGQDVSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIG
                     TFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYNFEVTT
                     GLKQSPVYP"
     gene            2279..3520
                     /gene="argJ"
                     /locus_tag="OY092_000360"
     CDS             2279..3520
                     /gene="argJ"
                     /locus_tag="OY092_000360"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HCX1075335.1"
                     /translation="MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFG
                     WIYSSSLASAAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGID
                     DARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKNGTDHIKDTKYTTPGAFNEA
                     ILTTDTCTKHIAVSLKIDGKTVTIGGSAKGSGMIHPNMATMLAFITTDAAIESNTLHQ
                     LLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILNQDHPQWETFVDAFNFVCTF
                     LAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIIT
                     AIGYSGCEIDPNCTYVQLNQIPVVDKGMAVLFDEQAMSNTLTHEHVTIDVQLGLGNAT
                     ATAYGCDLSYDYVRINASYRT"
     gene            3536..4300
                     /gene="argB"
                     /locus_tag="OY092_000361"
     CDS             3536..4300
                     /gene="argB"
                     /locus_tag="OY092_000361"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HCX1075336.1"
                     /translation="MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFI
                     NDALSNQQIEPHFVNGLRVTDKATMTITKRTLIADVNTALVAQFNQHQCSAIGLCGVD
                     AQLFEITSFDQQYGYVGVPTALNKDALQYICDKFVPIINSIGFNNHDGEFYNINADTL
                     AYFIASSLKAPIYVLSNIAGVLINDVVIPHLPLGDINQYIEHGDIYGGMIPKVLDAKN
                     AIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS"
     gene            4568..5047
                     /locus_tag="OY092_000362"
     CDS             4568..5047
                     /locus_tag="OY092_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HCX1075337.1"
                     /translation="MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQ
                     QLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFG
                     IAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN"
     gene            complement(5375..6019)
                     /locus_tag="OY092_000363"
     CDS             complement(5375..6019)
                     /locus_tag="OY092_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HCX1075338.1"
                     /translation="MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHR
                     LGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVV
                     DKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLNDFYQIWTQKESFTKLIGEGLI
                     KGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS"
     gene            complement(6032..13207)
                     /locus_tag="OY092_000364"
     CDS             complement(6032..13207)
                     /locus_tag="OY092_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HCX1075339.1"
                     /translation="MIMGNLRFQQEYFRIYKNNTESTTHRNAYWVKLAKNVEATKMMY
                     ALSTIVQQHASIRHFFDVTTDDNLTMILHEFLPFIEIKQVPTSSANYDLEAFFKQELS
                     TYHFNDSPLFKFKLFQFADAAYILLDFHVSIFDDSQIDIFLDDLCNAYRGNTVINNTR
                     QHAHLNRNDDKHNQDASHIALDSNYFRLENNSDIHIDSYLPIKHPFEQALYQTYLIDD
                     MTSIDMASLAVSVYLANHIMSQQHDVTLGIHVPSHLPNDLHGNIVPLTLTIDAKDVCQ
                     RFTTDFNKCVLQNMSQLQCANSSLSLETIFHCYHHMMSCCNDVIEDVHQIHDAHTSLA
                     DIEIFPHQHGFKIIYNSAAYDLLSIETLSDLVRNIYLQITEENGNKRTTVDELNLMTE
                     RDIQLYDDINVSLPEIDDAQTVVTLFEQQVEATPNHVAVQFDGVFITYQTLNARANDL
                     AHRLRNQYGVEPNDRVAVIAEKSIEMIIAMIGVLKAGGAYVPIDPNYPSDRQEYILKD
                     ATPKVVITYQALYENGKQNINHIDLNKIAWKNIDNLSKCNTLEDHAYVIYTSGTTGNP
                     KGTLIPHRGIVRLVHQNHYVPLNEETTILLSGTIAFDAATFEIYGALLNGGKLIVAKK
                     EQLLNPIALEQLINENDVNTMWLTSSLFNQIASERIEVLVPLKYLLIGGEVLNAKWVD
                     LLNQKPKHPQIINGYGPTENTTFTTTYNIPNKVPNRIPIGKPILGTHVYIMQGECRCG
                     VGIPGELCTSGFGLAAGYLNQPELTADKFIKDSNINQLMYRSGDIVRLLPDGNIDYLY
                     RKDKQVKIRGFRIELSEVEHALERIQGINKAVVIVQNHDQDQYIVAYYEAMHTLSHNK
                     IKSQLRMTLPEYMIPVNFMHIEQIPITINGKLDKKALPIMDYVDTDAYVAPSTDTEHL
                     LCQIFADILHVNQVGIHDNFFELGGHSLKATLVVNRIEASTGKRLQIGDLLQKPTVFE
                     LAQAIAKVQEQNYEVIPEAIVKDDYVLSSAQKRMYLLWKSNHKDTVYNVPFLWRLSSG
                     LNVAQLQQAVQHLIARHEILRTQYIVVDDEVRQRIVADVVADFEEVNTHFTDEQEIMR
                     QFVAPFNLEKPSQIRVRYIRSPLHAYLFIDTHHIINDGMSNIQLMNDLNALYQHKLLL
                     PLKLQYKDYSEWMSHRDMTKHRQYWLSQFKDEVPILSLPTDYVRPNIKTTNGAMMSFT
                     MNQQMRQLLQKYVEKHQITDFMFFMSVVMTLLSRYARKDDVVVGSVMSARMHKGTEQM
                     LGMFANTLVYRGQPSPDKMWTQFLQEVKEMSLEAYEHQEYPFECLVNDLDQSHDASRN
                     PLFDVMLVLQNNETNHAHFGHSKLTHIQPKSVTAKFDLSFIIEEDRDDYIINIEYNTD
                     LYHSETVRHMGNQCMIMIDYILKHQDTLQICDIPNGTEELLNWVNTHVNDRMLNVPGN
                     KSIISYFNEAVSRQGNHVALVMNDLTMTYETLHNYVDAIAHMLLSNGVGNGQRVALFT
                     ERSFEMIAAMLATVKVGASYIPIDIDFPNKRQGAILEDAKVTAVMSYGVEIETTLPVI
                     QLENAKGFVESKENEQYDDLHGNQLENTAMLDNEMYAIYTSGTTGMPKGVAIRQRNLL
                     NLVHAWSTELQLGNNEVFLQHANIVFDASVMEIYCCLLNGHTLVIPDREERVNPAQLQ
                     QLINKHRVTVASIPLQMCSVMEDFYIEKLITGGATSTASFVKYIEKHCGTYFNAYGPS
                     ESTVITSYWSHHCGDLIPETIPIGKPLSNIQVYIMSDGLLCGIGMPGELCIAGDSLAI
                     GYINRPELMADKWQNNPFGKGKLYHSGDLARYTSDGQIEFLGRIDKQVKVNGYRIELD
                     EIENAILAIRGISDCVVTVSHFDTHDILNAYYVGEQQVEQDLKQYLNDHLPKYMIPKT
                     ITHIDCMPLTTNDKVDTTRLPNPSPIQQSNKVYSEPSNEIEQTFVDVFGEVLKQNDVG
                     VDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTLYQYKTVRQIVNYMYQNQQSLVALP
                     DNLSELQKIVMSRYNLGILEDSLSHRPLGNTLLTGVTGFLGAYLIEALQGYSHRIYCF
                     IRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLPENMDTIIHA
                     GARTDHFGDDDEFEKVNVQGTVDAIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSE
                     ADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTN
                     RFSMVMNDLLQLDCIGVSLAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMP
                     VKSLLECVKRKEIELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMN
                     HISEKWPTITNNWLHHWAQYIKTIFNK"
     gene            complement(13654..14904)
                     /locus_tag="OY092_000365"
     CDS             complement(13654..14904)
                     /locus_tag="OY092_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075340.1"
                     /translation="MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLSQSIVGI
                     YLVGLVVLKFPLSIISGYLIEIFPKKLLVLIYQATMVIMLVFMGIFGSHQLWQIIGFC
                     VAYAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGY
                     SMLLLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLV
                     LKDRNYMLLISGFSIIMMGEFSISSYIAIRLKNQFETISIGSYDITGAKMLAILLMIN
                     TVVVILLTYSISKVVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGE
                     IIYSPIVSEQRFKIIPKAKRGTYSAVNALGIHFSETLARLGIVLGAFLTSLQMGLYMF
                     IVLTIGASMLVAGVFGGQKQVNTN"
     gene            complement(15290..16315)
                     /locus_tag="OY092_000366"
     CDS             complement(15290..16315)
                     /locus_tag="OY092_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent formate dehydrogenase"
                     /protein_id="HCX1075341.1"
                     /translation="MKIVALFPEAVEGQENQLLNTKKALGLKTFLEERGHEFIILADN
                     GEDLDKHLPDMDVIISAPFYPAYMTRERIEKAPNLKLAITAGVGSDHVDLAAASEHNI
                     GVVEVTGSNTVSVAEHAVMDLLILLRNYEEGHRQSVEGEWNLSQVGNHAHELQHKTIG
                     IFGFGRIGQLVAERLAPFNVTLQHYDPINQQDHKLSKFVSFDELVSTSDAITIHAPLT
                     PETDNLFDKDVLSRMKKHSYLVNTARGKIVNRDALVEALASEHLQGYAGDVWYPQPAP
                     ADHPWRTMPRNAMTVHYSGMTLEAQKRIEDGVKDILERFFNHEPFQDKDIIVASGRIA
                     SKSYTAK"
     gene            complement(16488..16847)
                     /locus_tag="OY092_000367"
     CDS             complement(16488..16847)
                     /locus_tag="OY092_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2294 domain-containing protein"
                     /protein_id="HCX1075342.1"
                     /translation="MNTIDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAH
                     MTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDID
                     LNDDEVISIFVFDKSIE"
     gene            complement(17064..18095)
                     /locus_tag="OY092_000368"
                     /pseudo
     CDS             complement(17064..18095)
                     /locus_tag="OY092_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498739.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
     gene            complement(18108..18869)
                     /locus_tag="OY092_000369"
     CDS             complement(18108..18869)
                     /locus_tag="OY092_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075343.1"
                     /translation="MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPVLVG
                     KSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLI
                     RPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLN
                     LTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLN
                     LEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE"
     gene            complement(18866..19840)
                     /locus_tag="OY092_000370"
     CDS             complement(18866..19840)
                     /locus_tag="OY092_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCX1075344.1"
                     /translation="MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPI
                     THSANLMMTKKLLSQYNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQ
                     KGSNIKAVALGHHEGNVIMGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQL
                     KIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDA
                     YCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSA
                     AWTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS"
     gene            complement(19854..20594)
                     /locus_tag="OY092_000371"
     CDS             complement(19854..20594)
                     /locus_tag="OY092_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075345.1"
                     /translation="MIKIQQLQHHFGSHKVIHNFNLDISKGEIVTFIGKSGCGKSTLL
                     NIIGGFIHPSSGRVIIDNEIKQQPSPDCLMLFQHHNLLPWKTINDNIRIGFQQKISDE
                     EINAQLKLVDLEGRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRY
                     KLQDQLVQLKHKTQSTIILVTHDIDEAIYLFDRIVLLGEGCNIISQYEITASHPRSRN
                     DSHLLKIRNEIMETFALNHHQVEPEYYL"
     gene            complement(20936..21448)
                     /locus_tag="OY092_000372"
     CDS             complement(20936..21448)
                     /locus_tag="OY092_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HCX1075346.1"
                     /translation="MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENL
                     THGYFIVEANDEAEAKQFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIP
                     EGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAV
                     DTPIDGIEKL"
     gene            21627..21830
                     /locus_tag="OY092_000373"
     CDS             21627..21830
                     /locus_tag="OY092_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075347.1"
                     /translation="MDKESVVASLARNKKIAVETMTGQRYIIERILHTNDEKHIHILK
                     PKDVVLDVDTIKDIDENHLDDAT"
     gene            complement(21892..22851)
                     /locus_tag="OY092_000374"
     CDS             complement(21892..22851)
                     /locus_tag="OY092_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HCX1075348.1"
                     /translation="MNGKKANTINRYKYFHHVDHQKIQQSSKKTLWASLIITLLFTVI
                     EFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILAAF
                     LNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTVILVRSLKQED
                     NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRN
                     AWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEG
                     DDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT"
     gene            complement(23498..24985)
                     /locus_tag="OY092_000375"
     CDS             complement(23498..24985)
                     /locus_tag="OY092_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCX1075349.1"
                     /translation="MAVNVRDYIAENYGLFINGEFVKGSSDETIEVTNPATGETLSHI
                     TRAKDKDVDYAVEVAQEAFESWSLTSKSERAQMLRDICDKLMAQKDKIAMIETLNNGK
                     PIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNF
                     PMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESG
                     NAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVE
                     GIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTG
                     KDQLDKIQSYIDAAKESDAQILAGGHRLTENGLDKGFFFEPTLIAVPDNHHKLAQEEI
                     FGPVLTVIKVKDDQEAIDIANDSEYGLAGGVFSQNITRALNIAKAVRTGRIWINTYNQ
                     VPEGAPFGGYKKSGIGRETYKGALSNYQQVKNIYIDTSNALKGLY"
     gene            25411..25794
                     /locus_tag="OY092_000376"
     CDS             25411..25794
                     /locus_tag="OY092_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HCX1075350.1"
                     /translation="MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDR
                     FYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLII
                     MVIIQTAVLFTFVKTLPKSNHKIEE"
     gene            25801..26127
                     /gene="isdI"
                     /locus_tag="OY092_000377"
     CDS             25801..26127
                     /gene="isdI"
                     /locus_tag="OY092_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdI"
                     /protein_id="HCX1075351.1"
                     /translation="MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLN
                     TEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDI
                     GYHYQK"
     gene            complement(26192..27337)
                     /gene="cap8P"
                     /locus_tag="OY092_000378"
     CDS             complement(26192..27337)
                     /gene="cap8P"
                     /locus_tag="OY092_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8P"
                     /protein_id="HCX1075352.1"
                     /translation="MKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIVITAQHRDML
                     DSVLSIFDIQADHDLNIMQDQQTLADLTANTLAKLDSIINEEQPDMILVHGDTTTTFV
                     GSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFE
                     NKDKESIFITGNTVIDALSTTVQNDFVSTIINKHKGKKVILLTAHRRENIGEPMHQIF
                     KAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGRNRIELIEPLDAIEFHNFTNQSY
                     LVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIED
                     DEAYQRMSQANNPYGDGQASQRICEAIEYYFGLRSDKPDEFIPLRHK"
     gene            complement(27414..28676)
                     /gene="cap8O"
                     /locus_tag="OY092_000379"
     CDS             complement(27414..28676)
                     /gene="cap8O"
                     /locus_tag="OY092_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8O"
                     /protein_id="HCX1075353.1"
                     /translation="MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQI
                     SIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMHALD
                     SILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILE
                     ELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNISLA
                     NELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKL
                     IQTGREINNSMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLN
                     QEPDIEVCAYDPHVALDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVI
                     FDTKNVVKSSFEDVSYYNYGNIFNFIDK"
     gene            complement(28730..29617)
                     /gene="capN"
                     /locus_tag="OY092_000380"
     CDS             complement(28730..29617)
                     /gene="capN"
                     /locus_tag="OY092_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     epimerase CapN"
                     /protein_id="HCX1075354.1"
                     /translation="MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSF
                     KDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYG
                     KEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
                     GNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTS
                     SVMYEIRRQSHHKTVLINMPSMLNKYFNKLLVFRKLFGNLIYSNTLYENNNALEVIPG
                     KMSLVIADIMDETTTKDKA"
     gene            complement(29617..30174)
                     /gene="cap8M"
                     /locus_tag="OY092_000381"
     CDS             complement(29617..30174)
                     /gene="cap8M"
                     /locus_tag="OY092_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8M"
                     /protein_id="HCX1075355.1"
                     /translation="MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPT
                     INNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEM
                     SIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
                     QSMMLDMYIIYKTIKNIVTSEGVHH"
     gene            complement(30185..31390)
                     /gene="cap8L"
                     /locus_tag="OY092_000382"
     CDS             complement(30185..31390)
                     /gene="cap8L"
                     /locus_tag="OY092_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8L"
                     /protein_id="HCX1075356.1"
                     /translation="MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGW
                     PYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKY
                     DQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYI
                     NRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKA
                     YREQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDH
                     RIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMD
                     KQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREIN
                     TMKYYNLLK"
     gene            complement(31391..32596)
                     /locus_tag="OY092_000383"
     CDS             complement(31391..32596)
                     /locus_tag="OY092_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HCX1075357.1"
                     /translation="MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSI
                     LTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFVLILLISILIESIALIIVFL
                     YFFNLNTIDIIFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLLLYY
                     LTQNWIVCFITSELFATIYTLVKLRGLTIGAYQSEDNNVVKDYVMLLSTNSLNNLNLY
                     LDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSHISVNESDNIKKQYLKT
                     NLFAIAALCLVMIICYPITIIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLN
                     TKHASITLQANYMTFHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNIIGLKS
                     KFINKKDVD"
     gene            complement(32589..33755)
                     /locus_tag="OY092_000384"
     CDS             complement(32589..33755)
                     /locus_tag="OY092_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HCX1075358.1"
                     /translation="MKFFVLCAIISMNIFIVISTFTKEVLGFPIEPVYYSTMVGIALI
                     TTVFAIYKIIVTQEIPRGLILLIAICLLYLAFYYFSPDKEEKLAKNNILFFLTWAVPA
                     AISGIYIKYINKATVERFFKLVFFIFSVSFIFVILIPKLTGEIPSYINFGLMNYQNAS
                     YLSAFTAGLGIYFIMKGSVKHKWIYVLFTIIDIPIVFIPGGRGGAILLILYGLFAFIL
                     ITFKRGIPIAVKSIMYISALSISSVLIYFLFTKGSNTRTFSYLQGGTLNLEGTSGRGP
                     IYEKGIYFIQQSPLLGYGPFNYYKLIGNIPHNIIIELILSFGLLGFFIIMICILLLVY
                     KMIRNYDPNTIDLLVMFIAIYPITLLMFSSNYLVVSEFWFVLFYFITKGRRHHG"
     gene            complement(33769..34878)
                     /locus_tag="OY092_000385"
     CDS             complement(33769..34878)
                     /locus_tag="OY092_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCX1075359.1"
                     /translation="MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNK
                     RLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAYKPDVIHANDFDVLLMV
                     YLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKE
                     YYQSKGYKKEANVITNAPILNDSREFKEIENFKSIVYQGQIVMDRGYEEFIIASSAFK
                     QNAPSFIIRGFGPHEEVIKELISYNPENIRLDKPVEVKELVDKLAESNVGVVLTKPVS
                     INFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLR
                     DNHDLFNHLRQNAIKASKILNWQIESERLVKLYKF"
     gene            complement(34883..35509)
                     /locus_tag="OY092_000386"
     CDS             complement(34883..35509)
                     /locus_tag="OY092_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic acetyltransferase"
                     /protein_id="HCX1075360.1"
                     /translation="MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRW
                     CKIRNSHIGEYSYIGFGSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNN
                     PFNIKQKFIDFNDQPSRTTIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYE
                     VVGGVPAKVIKKRFDNKTIEKLLESKWWEKTPDKLKGFSVEYLNKKDT"
     gene            complement(35512..36636)
                     /gene="cap8G"
                     /locus_tag="OY092_000387"
     CDS             complement(35512..36636)
                     /gene="cap8G"
                     /locus_tag="OY092_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8G"
                     /protein_id="HCX1075361.1"
                     /translation="MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYT
                     LNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCL
                     AAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGF
                     NKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKS
                     LMNAINDIAKKYKMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAF
                     VVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREM
                     QNNNEPMIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK"
     gene            complement(36640..37749)
                     /gene="cap8F"
                     /locus_tag="OY092_000388"
     CDS             complement(36640..37749)
                     /gene="cap8F"
                     /locus_tag="OY092_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8F"
                     /protein_id="HCX1075362.1"
                     /translation="MNIVITGAKGFVGKNLKADLTSTTDYHIFEVHRQTKEEELESAL
                     LKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNKKKPAILLSSSIQATQDNP
                     YGESKLQGEQLLREYSEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
                     VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS
                     RLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSV
                     NISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVG
                     YTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV"
     gene            complement(37762..38790)
                     /gene="cap8E"
                     /locus_tag="OY092_000389"
     CDS             complement(37762..38790)
                     /gene="cap8E"
                     /locus_tag="OY092_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8E"
                     /protein_id="HCX1075363.1"
                     /translation="MFDDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQDD
                     IRKKYNNSKLKFYIGDVRDSQSVETAMRDVDYVFHAAALKQVPSCEFFPVEAVKTNII
                     GTENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFIAKSRNIRSEQTLIC
                     GTRYGNVMASRGSVIPLFIDKIKAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAET
                     GDIMVQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMG
                     DYFRVPADSRDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLLTLEYVRNEL
                     NDYKASMR"
     gene            complement(38780..40603)
                     /gene="cap8D"
                     /locus_tag="OY092_000390"
     CDS             complement(38780..40603)
                     /gene="cap8D"
                     /locus_tag="OY092_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8D"
                     /protein_id="HCX1075364.1"
                     /translation="MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLL
                     ILAAISLFISHHISAFIFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNR
                     PFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQML
                     KSDEMKLEPVLAVDDDEHKRNITITEGVKVQGEIADIPELVRKYKIKKIIIAIPTIGQ
                     ERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMIS
                     NELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIYLINRELRNRFGKNV
                     DIVPIIADVQNRARMFEILEMYKPYAVYHAAAHKHVPLMEDNPEEAVRNNILGTKNTA
                     EAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHQTNFVAVRFGNVL
                     GSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEGGEVFVLDM
                     GEPVKIVDLARNLIKLSGKKEDDIRITYTGIRSGEKMFEELMNKDEVHPEQVFEKIYR
                     GKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR"
     gene            complement(40623..41387)
                     /gene="cap8C"
                     /locus_tag="OY092_000391"
     CDS             complement(40623..41387)
                     /gene="cap8C"
                     /locus_tag="OY092_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8C"
                     /protein_id="HCX1075365.1"
                     /translation="MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHL
                     HPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDS
                     RYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALS
                     QVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYY
                     EDMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL"
     gene            complement(41390..42076)
                     /gene="cap8B"
                     /locus_tag="OY092_000392"
     CDS             complement(41390..42076)
                     /gene="cap8B"
                     /locus_tag="OY092_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8B"
                     /protein_id="HCX1075366.1"
                     /translation="MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRL
                     LVTSEKPGAGKSTVVSNVAITYAQAGYKTLIIDGDMRKPTQNYIFNEQNNNGLSNLII
                     GRTTMSEAITTTEIDNLDLLTAGPVPPNPTELIGSERFKELVDLFNKRYDIIIVDTPP
                     VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKILMEKAGSNILGVILNKAKVDKS
                     SSYYHYYGDE"
     gene            complement(42092..42760)
                     /gene="capA"
                     /locus_tag="OY092_000393"
     CDS             complement(42092..42760)
                     /gene="capA"
                     /locus_tag="OY092_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     protein CapA"
                     /protein_id="HCX1075367.1"
                     /translation="MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKY
                     QANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSK
                     LSSMLTITNQENTQLINIQVKSGHKEDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
                     DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSI
                     QKFN"
BASE COUNT        13719 a         8090 c         6319 g        14660 t
ORIGIN      
        1 ggagggagac cgatgaattc aatcattgaa ttaactgatt attatagctc taataattat
       61 gcaccactta agcttgtcat ttctaaaggt aaaggtgtca aagtttggga tactgatggc
      121 aaacaatata tagattgcat ctcaggtttt tcagttgcaa accaaggcca ttgtcatcca
      181 acaattgtta aagcgatgac tgaacaagct tcaaagttgt ctatcatttc acgtgtcctt
      241 tatagtgaca atctcgggaa atgggaagaa aaaatttgtc atcttgctaa gaaagacaaa
      301 gtactccccc ttaactctgg tactgaagct gttgaagcag ccattaaaat tgctagaaaa
      361 tggggctctg aagttaaagg cattactgac ggacaagttg aaatcatcgc tatgaataac
      421 aattttcacg gtcgtacact tggctcatta tcactatcta accacgacgc atataaagca
      481 ggatttcacc ccctacttca aggcactaca acagtagatt ttggagacat tgaacaatta
      541 acacaagcta tttcaccgaa tacagcagca attattttgg aaccaattca aggtgaaggt
      601 ggcgttaata taccaccgaa aggatatatt caagctgtgc gtcaactatg tgataaacat
      661 caaatattat tgattgcaga tgaaattcaa gttggtcttg gtagaactgg gaaatggttt
      721 gctatggaat gggagcaagt cgttccagac atttatattt taggtaaggc attgggtggc
      781 ggcttatacc ctgtatctgc tgtacttgca aataatgatg tcatgcgtgt tctaacacca
      841 ggtacacatg gttcaacatt tggtggtaac cctttagcca ttgcaatatc gacggcagcg
      901 cttgatgtac ttaaagatga acaactggtt gaacgatcag aacgcttagg ttcattttta
      961 ttaaaagcgt tgctacaact taaacatcct agtattaaag aaattagagg tcgtggttta
     1021 tttataggca tagagcttaa cacagatgct gcaccttttg tggatcaact gattcaacgt
     1081 ggaatcttat gcaaagacac gcatcgtact atcattcgat tgtctccacc tctagtcatt
     1141 gatagagagg aaatcaatca aattgttgca gcttttcaag acgtttttaa aaattaacaa
     1201 ttaatcattt atatatgaca taggagggat tcatgatgat taaagtaggt atcgttggcg
     1261 gtagcggtta tggcgcaatt gaattaattc gattattaca aacacatcct catataacga
     1321 ttgcacacat ctactcacat tcaaaagtag atgaaccgtt gaaattaaca tttccacatt
     1381 tacaacatat tatgcaacat ttcgaagcac ttacagtgga caataatgac tgtgatgtaa
     1441 ttttctttgc gacaccagca cccgtaagta aaacatgtat ccctccctta gtagaaaaag
     1501 gtattcatgt tatcgattta tctggcgcat ttagaattaa gaatcgtgaa atatatgaag
     1561 catattacaa agaaactgct gcagcacaag atgatttgaa tcatgctatt tacagcattt
     1621 cagaatggca atcgtttgat aacaatggaa cgaagctcat ttctaatcct ggctgtttcc
     1681 ctacagcaac attattagca ttacatccac ttattagcga aaaaatagta gatttgtcat
     1741 ctattattat tgatgctaag accggcgtgt caggtgctgg tcgttcatta tcacaacgtg
     1801 ttcatttttc agaaatgaat gaaaatctaa gcgcttatgc aatcggaaac cataaacaca
     1861 aaccggaaat cgagcaatat ttatctatcg ttgcgggtca agatgtatca gtcatattta
     1921 caccacatct cgtaccaatg acacgaggta ttttatcaac aatttatgtc aaattatcat
     1981 ctgaatatac aactgaatca ttacataaat taatgacctc ttattatgct aatcagccat
     2041 ttgtcagaat tagagatatt gggacttttc caaccacaaa agaagtactc ggtagtaact
     2101 actgcgatat cggtatctat gtagatgaaa caacgcaaac agcaatttta gtatcagtga
     2161 ttgataacct tgtcaaaggg gcaagtggtc aagccattca aaacttaaat atattatata
     2221 attttgaagt tacgactggc ctaaaacaat caccagttta tccataaggg gtgttagaat
     2281 gaaacatcaa gaaacgacat cacaacaata taacttttca attattaaac atggcgatat
     2341 tagtacacct caaggcttca cggctggtgg tatgcacatc ggtttacgcg ctaacaaaaa
     2401 agactttggc tggatttact catcgtcttt ggcaagtgca gctgccgtat atactttaaa
     2461 tcagtttaaa gctgcaccac ttattgtcac tgaagacact ttacaaaagt ctaaaggaaa
     2521 attacaagca cttgttgtta attcagctaa tgcaaattct tgtaccggtc aacaaggcat
     2581 agatgatgca cgacaaacac aaacatgggt tgctcaacaa cttcaaatac catctgagca
     2641 tgttgctgtt gcttcaactg gggttattgg tgaatatttg cctatggata aaattaagaa
     2701 tgggaccgat catattaagg atactaagta cacaacgcca ggtgcgttta acgaggcaat
     2761 tttaacaact gatacatgta caaaacatat cgctgtatca ctaaaaatcg atggtaaaac
     2821 cgttacaatt ggtggtagcg ccaaaggttc aggtatgatt cacccaaata tggctaccat
     2881 gcttgctttt ataacaaccg atgcagcgat tgaatcgaat acacttcatc aattattaaa
     2941 atcttcgact gaccatacat ttaatatgat tactgttgat ggcgatacaa gtacaaatga
     3001 catggtatta gtcatggcaa atcaccaagt tgaacaccaa atacttaatc aagaccatcc
     3061 acaatgggaa acatttgttg atgcattcaa ttttgtctgt acatttttag ctaaagctat
     3121 agctagagat ggcgaaggcg caacaaagtt aatcagcgtc aatgtgtcag gtgctaagtc
     3181 aatatcagat gcaagaaaaa tcggtaaaac tatcgtaagt tcaaatctag taaaatcagc
     3241 tatttttggc gaagatgcca attttggtcg aatcattaca gctattggct atagcggatg
     3301 tgaaattgat cctaactgca catatgttca actgaaccaa atacctgtcg ttgataaagg
     3361 tatggctgta ctatttgatg agcaagctat gtcgaataca ttaactcatg aacatgtcac
     3421 aattgacgtt cagcttggtt taggtaacgc tacagcgact gcatacggtt gtgatttatc
     3481 ctatgattat gtgcgtatta acgcatcata tcgaacataa ggtggtgttg gttagatgaa
     3541 atttattgtc attaaaattg gtggcagtac acttagtgac atgcatccat caattattaa
     3601 caatattaag catttacgat caaacaacat ctaccctatt atcgttcatg gcggtggccc
     3661 ttttattaat gatgcattat caaaccagca aatcgagcca cactttgtta atggcctaag
     3721 agtgactgat aaagcaacca tgacgattac taaacgcacg ctcattgcag acgttaacac
     3781 ggcattagta gctcaattta accagcacca atgttctgca ataggcttat gtggtgtaga
     3841 tgcacagctg tttgaaatta catcttttga tcaacaatat ggatatgtcg gagttccgac
     3901 cgctttaaat aaggatgctt tacagtatat atgtgataaa tttgtaccta tcattaattc
     3961 gattggtttc aataaccatg atggagaatt ttacaatatt aatgctgaca cgcttgccta
     4021 ttttattgca tcatcattaa aagcacctat ttatgtatta agtaatattg caggtgtact
     4081 catcaatgat gttgttatac ctcatctacc attaggtgat attaatcagt atattgagca
     4141 tggtgatatt tatggaggta tgattcccaa agtgcttgat gctaaaaatg cgattgaaaa
     4201 tggctgtcct aaagttatca ttgcatcagg aaacaagcca aatattatcg aatctattta
     4261 caataatgat tttgttggca caacaatcct taattcataa ccatgaaatt aaggactaac
     4321 aagttttgac acgcgatgat tccagttcgt ttatccattg cgctgaaaca tttatttacc
     4381 gttcatctcg tcaataattc cgaatacagt atgatacaat atgagatgta aaaaactaat
     4441 aaccttttac aaatttgttt atcaaaatat tttaagtttt gcaaagcttt tcattgtgat
     4501 tattttcaca aaatactata atgaggatag taaatagaga ggagtcctta agttgacgaa
     4561 acgacaaatg ggtatattca tttatgctgg aattatcggt ggcttgttat ctggaattgt
     4621 aaaattaggt tgggaggtca tgtttccacc tcgcacacca gaacgtaatg caacaaaccc
     4681 acctcaagag ttattgcaac aattaggatt tagtagtgag tttacgcatc aaacatatac
     4741 attttcaaat atggaattgc cttgggtaag ctttattgtc cactttagtt tttctatcgt
     4801 cattgcaatt atttactgca tattagttaa aaaatacgct tacttagcga tgggacaagg
     4861 tgctgtattt ggtattgcta tttgggtatt attccacctt atcattatgc caatcatgca
     4921 tactgtacct gctgtgtggg atcaaccatt ccaagagcat ctgtcagaat tctttggcca
     4981 tatcgtctgg atgatgacaa ttgaattagt gcgacaacat tttgtctatc gctataaatt
     5041 aaattaatac actgactaac attaacgtga gttttaaatc atcgtttgag tatgatgatt
     5101 gatgctcacg ttattttatt aactgacatg atatgattcc agccaactta cgtgagcatt
     5161 aaagtctcaa atgcgtcgta acaaactatt attttcggta atttcaatat tgctcagtat
     5221 attttcacct tatcacttac tttaatctcg tcatgatttt gaatgatgcc atcgtgtatt
     5281 cacctttcat ttttccaata aaaaaacatc taacagtaaa catttaggca gtatagttta
     5341 aaatcactgc gcaatgatac tgtcagacgt catattaact actcaataac tgaaatacag
     5401 acactttttt ataaccccag ggtgcctgtc ctaagaaaca tacctgtacc ataaactgat
     5461 caaaaataaa ttgtttgaac ttcacttcac gtgattgata aaagtgtgat tgtgtcatat
     5521 cataaatgtc caatcctttg attaaacctt caccaatcaa ttttgtaaaa ctttcttttt
     5581 gtgtccatat ttgataaaaa tcatttaaac tacatatttg atgtgcttcg tttgtagaga
     5641 aacacgtcac taacgtacgc cagtctaaac gttgtgatat cttttcgata tctataccaa
     5701 ctggttcttt atcgacaaca cacacgatat aaggataact atatgataag ctcacataga
     5761 tgggctgtcc atcacgattg tgttgaacaa tatctgcctt acctcgtggc gaaatgtgat
     5821 aatgccattc atgtggtaat aaacctgtgt catgttgaat tccatattgc actaaaatat
     5881 ctcccaatct gtgcatgagt ttatcttgat tgtatctata gttgactgta cgtggttttt
     5941 tatatgacca acgactttgt gatattaatt cttcaatact tttcaagtta ctctgtaatt
     6001 gcattacaaa tactgtcata actttcccta cttacttatt gaatattgtt ttgatatatt
     6061 gcgcccaatg atgcagccaa ttgttagtta tcgttggcca tttttcactg atgtgattca
     6121 ttatttttaa tgttaatgtt gtatctatca ttgctagttg ttgttcacgg tcaacactag
     6181 ttaatccaat cgtttcgtac atgtcttgtt tctgtaaaat ttcattaaat gattcatcgc
     6241 tgacgagttc aatttctttg cgcttaacgc attctaacaa agatttcacc ggcattttat
     6301 taggtgatag cacatggtaa atgatttgtg gtgtgttgac ctgtgctaat gcgacaattt
     6361 gtcttgcagt cgtatccaca aaagaaaaat ctacaggcat ttcagccagg ctaaccccga
     6421 tacaatccag ttgtaacaaa tcattcatta ccattgaaaa acggttagtc tttatatttc
     6481 tcatatgcca tcttccattg taaggactcg tcaaattacc aacacgtaca atccgaccat
     6541 ctaagccatt atttacagct tctaatactt ttaattcact ataaaattta ctccgtgtat
     6601 atggtgatgt tagtagttgt cctttataga catccgcttc tgaaaatgtc acatcttctg
     6661 tgtctatatc aaaataagtt cccacactta tcgtagacac atatattaac cttgcatgat
     6721 gttgttgtgc caaacgtatg gcatcaacag taccttgaac atttactttt tcaaattcat
     6781 catcatcacc aaaatgatct gtacgagcac ctgcatgaat aatcgtatcc atgttttctg
     6841 gtaaaacaac atcatccata cactcgaaat caccaacaat gacttcaatg tttgataaca
     6901 tcatttcaac cgtctcttct gaaaaataat catttaaatt cgtcatcaac ttataccatg
     6961 ctatttcctc attatcagca cgtatgaaac aataaatgcg atgactgtat ccttgtagtg
     7021 cttcaatcag ataagcacct aaaaaacctg tcacgccagt caatagtgta tttcctagag
     7081 gtcgatgact tagactatcc tctaaaatac ccaagttata acgagacata acaatctttt
     7141 gtaattccga aagattatcc ggtaatgcaa ctaatgattg ttgattttgg tacatataat
     7201 taacaatctg tcgcacggtt ttatattggt ataatgtctg cattgaaata tgatggccaa
     7261 atcgttttaa atgcgagaca actaacatcg cctctaatga gttaccacca agttcaaaga
     7321 aatcatcgtc aacaccgaca tcattttgtt tcaatacctc tccaaataca tcaacaaatg
     7381 tctgctcaat ttcattagag ggttcgctat acactttatt agactgttgt ataggtgatg
     7441 gatttggcaa acgcgtagta tccaccttgt cattcgtggt taatggcata caatcgatat
     7501 gcgttatagt cttaggaatc atatacttag gcagatgatc atttaaatat tgcttcaaat
     7561 cctgctccac ttgttgctct ccgacataat aagcattcaa tatatcatgc gtatcaaagt
     7621 gacttactgt tacaacacaa tcagatatac cacgaatagc taatattgca ttttcaattt
     7681 catcaagttc aatacggtac ccgttaactt tcacttgttt atctattctt cctaaaaatt
     7741 caatttgacc atcagatgta taacgtgcta aatcaccact atgatacaac tttcctttac
     7801 caaatggatt attttgccat ttatcagcca ttaattctgg acggttaata tatcctatcg
     7861 ctaaactatc acctgcaata cacaactcgc ctggcatacc aataccgcat aacaaaccat
     7921 ctgacataat atacacttgg atgttagata agggtttgcc aattggaatc gtctcaggta
     7981 tcaaatcacc acaatgatgt gaccaatacg atgtgatgac tgttgactca gatggtccat
     8041 aggcattgaa atacgtgcca caatgcttct caatatattt aacaaaggat gccgtactag
     8101 ttgccccgcc tgtaatcaac ttttcaatat aaaagtcttc cataacacta cacatctgta
     8161 acggaatcga cgccaccgtc acacgatgct tattaatgag ttgttgtaac tgtgctggat
     8221 taacacgttc ctctctatct ggaatcacaa gcgtatgacc atttaacaaa caacaataaa
     8281 tctccataac tgatgcatca aaaacaatat ttgcatgttg caaaaatact tcattgttgc
     8341 ctaattgcaa ttcagttgac catgcatgca ctaaattcaa caaatttcgt tgtcgtatgg
     8401 caaccccttt aggcatcccg gtcgtaccag atgtgtaaat agcatacatc tcattatcta
     8461 acatcgctgt gttttcaagt tgattgccat gtaaatcatc atattgttca ttttcctttg
     8521 attcaacaaa gcctttagca ttttccaatt gaatgactgg taatgtcgtt tcaatttcaa
     8581 cgccataaga catgactgca gttactttag catcctccaa aattgcacct tgtcgtttat
     8641 tcggaaaatc aatatcgata ggtatataag atgcacctac tttaactgtc gccaacatcg
     8701 ccgcaatcat ttcaaaacta cgttctgtaa acaaggcaac ccgttgacca ttgcccacac
     8761 catttgatag gagcatgtgc gcaatggcat ccacatagtt gtgtaatgtt tcatacgtca
     8821 ttgtcaaatc attcatgact agcgcaacat gattaccttg tcgtgagaca gcttcattaa
     8881 agtaacttat gatagattta tttcccggga cattaagcat tcgatcgtta acatgcgtat
     8941 tgacccaatt tagaagttcc tccgtgccgt ttggtatatc acaaatttgt agtgtatctt
     9001 gatgcttcaa aatataatca atcataatca tacattgatt acccatgtga cgaactgttt
     9061 ctgagtgata taaatcggta ttatactcga tattgattat atagtcatcg cgatcttctt
     9121 caatgatgaa agataaatca aatttcgccg tcactgattt gggttgaatg tgtgttaatt
     9181 tactatgccc aaaatgagca tgattcgttt cattgttttg tagtactaac atgacatcaa
     9241 ataatggatt ccgtgaggca tcatgtgatt gatctaagtc atttactaaa cattcgaatg
     9301 ggtattcttg atgctcgtat gcctccaaac tcatttcctt aacctcttgt aaaaactgtg
     9361 tccacatttt atcaggtgac ggttgccctc tatataccaa cgtattagca aacatgccta
     9421 gcatttgctc cgtgccttta tgcatacgcg cactcatcac actaccgaca acaacatcat
     9481 cttttcgagc atatctgctt aacaacgtca tgaccacact cataaagaac ataaaatcag
     9541 taatttgatg cttttctaca tacttttgaa gtagctgtct catttgttga ttcattgtaa
     9601 atgacatcat tgctccattt gtcgttttaa tatttggtct aacatagtct gtcggtaagc
     9661 ttaaaatagg tacttcatct ttgaattgag ataaccaata ttgtctatgt ttcgtcatat
     9721 cacgatgcga catccactca ctatagtctt tatattgcaa tttaagtggt aacaataatt
     9781 tatgttgata aagtgcgtta agatcattca ttaattgtat attactcata ccgtcattaa
     9841 tgatatgatg tgtatctata aacaggtatg catgtaaggg acttctaatg tatctcactc
     9901 taatttgact tggcttttcc aaattaaaag gtgccacaaa ttggcgcatg atttcttgtt
     9961 catccgtaaa atgcgtgtta acttcttcaa agtcagctac aacatctgcc acaatacgtt
    10021 gtcgaacctc atcatctaca acaatatatt gtgttcgtag aatctcatgt cgcgctatca
    10081 aatgctgaac tgcttgttgc aattgagcta cattaagtcc tgatgataac cgccataaaa
    10141 aaggtacgtt atacaccgta tctttatggt ttgatttcca taataaatac atacgctttt
    10201 gtgcagagct cagcacataa tcatctttaa ctatagcttc tggaatcact tcatagtttt
    10261 gttcttgaac cttagcaatc gcttgtgcta gttcaaatac agttggcttt tgtaataaat
    10321 caccaatttg taatcgtttc ccagtagatg cctctatccg attcaccact aacgttgctt
    10381 ttaatgaatg gccacctaat tcaaagaaat tatcatgaat acctacttga ttcacatgta
    10441 aaatatctgc aaaaatttgg catagcaagt gttcggtatc tgtactcggt gctacatagg
    10501 catccgtatc gacatagtcc atgataggca atgccttctt atctaatttc ccattaatag
    10561 taataggaat ttgctcaata tgcatgaaat taactggtat catgtactcc ggtaaggtca
    10621 tacgtaattg tgatttaatc ttattatgtg ataatgtatg catcgcttca taataagcaa
    10681 cgatatactg atcttgatca tgattttgaa caataacaac tgctttatta ataccttgta
    10741 tacgctcgag cgcatgctca acctctgaca actcaatcct aaaccctcga atcttaactt
    10801 gtttgtcctt tcgatataaa taatctatgt tgccatcggg taatagacga acgatatcac
    10861 cacttctata catcagctga tttatatttg aatctttgat aaatttatct gctgtcaatt
    10921 ctggctgatt taaataacct gcagctaacc caaagccact tgtacataat tctccaggaa
    10981 taccaacgcc acatcgacac tcgccttgca tgatataaac atgagtacca agaatcggtt
    11041 taccaatagg aatacgattt ggaactttgt taggtatatt atacgtcgtt gtaaatgttg
    11101 tattttcagt tggtccataa ccattaataa tttgaggatg cttcggtttt tgattaagca
    11161 aatccaccca cttagcattc aatacttctc caccaattaa taagtacttt aacggtacca
    11221 atacttctat tcgttcacta gcaatctgat taaataatga ggaggttaac cacatagtat
    11281 taacgtcatt ttcattgatt aattgttcta acgctattgg atttaataat tgttcttttt
    11341 tagcaacaat cagctttcca ccattgagca atgcaccata tatttcaaat gttgcagcat
    11401 caaaggctat agttcctgat aacaaaatcg tcgtctcttc atttaatggt acataatgat
    11461 tttgatggac caagcgaaca atacctcggt gcggaattag tgtacctttt gggttaccag
    11521 ttgtccccga cgtgtaaata acataagcat gatcttctaa cgtgttacat ttagaaagat
    11581 tatcaatatt tttccacgct atcttattca aatcaatgtg attaatattt tgtttaccat
    11641 tttcatataa agcttggtac gttattacaa ctttaggcgt tgcatctttt aaaatgtact
    11701 cctgacgatc acttggatag ttcggatcaa ttggcacgta agccccacca gctttcaaca
    11761 cacctatcat cgctattatc atctcaatac ttttttcagc tatgacagcg acacgatcat
    11821 taggttcaac accatactgg tttctcaaac ggtgtgctaa atcattcgcg cgtgcattca
    11881 atgtttgata tgttataaac actccgtcaa attgcacagc gacatgattc ggcgttgctt
    11941 caacttgttg ctcaaataag gtaacaactg tttgcgcatc atctatctca ggcaaactta
    12001 cattgatatc gtcatataat tgaatatcac gttctgtcat caaattaagt tcatctacag
    12061 ttgttcgttt atttccattt tcttcagtaa tttgcaaata aatatttcga actaagtcac
    12121 tcagcgtctc gattgagagc aaatcatatg ctgcactgtt atatataatt ttgaacccgt
    12181 gttgatgtgg aaaaatttca atatccgcta aagatgtatg tgcatcatgt atttgatgta
    12241 catcctcaat aacatcatta caacaagaca tcatatgatg ataacaatga aaaatagtct
    12301 ctagtgaaag cgaagaattc gcgcactgta attgcgacat attttgcaac acacatttat
    12361 taaaatctgt tgtaaaacgt tgacatacat cttttgcatc gattgttaac gttaacggca
    12421 caatatttcc gtgtaaatca tttggtaaat gtgatggtac atgtatacct aatgtgacat
    12481 catgttgttg actcattata tgattagcta aatacacact aacagccaac gatgccatat
    12541 ctattgatgt catatcatca atcaaatacg tttgatataa agcttgctca aatggatgct
    12601 taattggtaa ataactatca atatggatgt cagagttatt ctctaaccga aaatagtttg
    12661 agtctaatgc tatatgcgat gcatcttgat tgtgcttatc atcatttcta tttaaatgtg
    12721 catgctgtcg agtattgtta ataacagtat tgccacgata tgcattgcat aaatcatcaa
    12781 gaaaaatatc aatttgacta tcatcgaaaa tggacacatg aaaatctaat agtatatatg
    12841 cagcatcagc gaactgaaac aatttaaatt tgaataaagg tgaatcatta aaatggtaag
    12901 tacttaattc ttgcttaaaa aaagcttcta aatcatagtt tgcggaagaa gttggaactt
    12961 gttttatctc aataaaaggc agaaattcat gaagtatcat tgttaaattg tcatcggtag
    13021 taacatcaaa aaaatgtctt atagatgcat gttgttgcac aattgtcgat aatgcataca
    13081 tcattttagt agcttcaaca tttttagcga gtttaaccca atacgcatta cggtgtgtcg
    13141 ttgattctgt attatttttg tatatacgaa aatattcctg ctgaaatctc aaattaccca
    13201 taatcataaa aagtccttct ttcatatcat aatactcatt acttactgaa attgcatgat
    13261 gatatgataa ccgacgaaat gttaattaac tcgttatgta atgattaata taaaacacca
    13321 ttcgcaacat atgagcgata tattctaccc taaaatacat cttgtatcat cgttacaatt
    13381 ggtatatttt tcaatgtaaa ttacatacat cttcgataaa tagtacacta caactcgtta
    13441 atcactttct gttgttcaca tctcattgca aattcaatat tgttgttaca aaatatccat
    13501 gaagcaagtt tatattaaac aaacaactcg cataaaacaa ttgttatcct taaattttaa
    13561 caaattctta ataaatttat ctctatttta attacgaccg aattaatagg ttttcaatat
    13621 aaaaagatgc ataaaataaa tatttaaata aattcaattt gtattcactt gtttttgtcc
    13681 cccgaataca ccagcaacaa gcatgctagc accaattgtt aaaacgataa acatatacag
    13741 tcccatttgt aatgacgtta agaaagcacc caacacaatc cctaacctag ctagtgtttc
    13801 tgaaaaatga atacctaatg cattaactgc actatatgtt cctcttttag ctttaggaat
    13861 aattttaaag cgttgttctg aaactatagg cgaataaata atttcaccta cagtcgcaat
    13921 tatcataaaa acaactaata agccaaactg attaagatag gttagaccac tatagccaac
    13981 aatataaatc agcaaaccag tgattaaagc ttttttaaaa tctattttca atacaacttt
    14041 cgagattgaa tacgtgagta aaatgacgac gaccgtatta atcattagca agattgctaa
    14101 catcttagca cctgtaatat catatgaacc tatacttatt gtttcaaact gattctttag
    14161 tctaatagca atatatgagg agattgaaaa ttcacccatc atgatgatac tgaaccccga
    14221 aatcaataac atataattac ggtctttcaa aactaattta taactgcgaa atatattcat
    14281 tatttgtaat ttttgataac gacttgcatg cctcttgtca tcactttgct ttacttgatt
    14341 tcggtcttga ggtaaccaaa tatataaaat aaagagtaca attaaaaata tacaagctgc
    14401 tattaagaaa agtagtaaca tactgtagcc atacatcaag ccgcctaaca atgccccaat
    14461 agctaccgat aagttcgtca tccaatagct aatcttgtaa atataatgtt ccacgtcttc
    14521 ggtaattgca tccataatta atgtgtccat aactggaaat tgtaatcccc aaacgattgt
    14581 aaatatggca tatgcaacac aaaaaccaat aatttgccac aattgatgtg acccaaatat
    14641 gcccatgaac acaagcatta tcaccatcgt cgcttgataa ataagtacta gcaacttttt
    14701 cggaaatatc tcaataaggt aaccagatat aatggacaat ggaaatttta gaaccactaa
    14761 accaacaaga tatataccga caattgattg acttaacata tctgttaaat atagtgctat
    14821 aaacggtata aatgctgtcg taataattag ctgtaaaaaa ttgctaatca atcgtacttt
    14881 caaagtcgta cttaagcgtt tcattaataa ctacacccct atccacatat atacacacta
    14941 ccatttatat aaaatctatt attagattat acgttgaaac aaagaatttt tagttataca
    15001 aagttattta acaaacaaat gcatcgactt tacaatgcat cttgcatata atgcctcaaa
    15061 aaaattagca ctatatgact atatattatt ccaaatgaat gaaatttatc aataattgcg
    15121 taagtgaaca catatgtgcg taaatgttaa atcattgtcc taacatagcc gtgactatac
    15181 ttagatgtaa tcataaaaaa actactgcca tctttacaac agcagtagtg cttatataat
    15241 tcatttatat aaaattgaaa gcgttaatcg ctagcccagc atccttattc tatttagctg
    15301 tataactttt actagcaata cgaccacttg caacaataat atctttatct tggaaaggtt
    15361 catgattgaa gaaacgctct aaaatatctt taactccatc ttcaatacgt ttttgtgctt
    15421 ctaaagtcat acctgaatag tgaactgtca tagcatttct aggcattgtt ctccatggat
    15481 gatcagcagg tgcaggttgt ggataccaaa catcaccagc atatccttgt aaatgctcgg
    15541 atgctaacgc ttcaactaac gcatcgcgat ttacaatttt accacgtgca gtattcacta
    15601 aataactgtg ttttttcata cgacttaaaa catctttatc aaataagtta tcagtttctg
    15661 gtgttaatgg tgcatgaatt gtaatcgcat cacttgttga aacaagttca tcaaagctta
    15721 caaatttaga caatttatgg tcttgttgat tgattggatc atagtgttgt aatgttacat
    15781 taaatggcgc taatctttca gcaacaagtt gtccaattcg accaaatcca aaaataccaa
    15841 ttgttttgtg ttgtaattca tgcgcatgat tacctacttg agacaagttc cattcacctt
    15901 ctactgattg acgatgacct tcttcatagt ttctaagaag tattaataaa tccataaccg
    15961 catgttctgc cacactaact gtattacttc ctgtaacttc aacgacacca atattgtgtt
    16021 cacttgctgc cgctaaatct acatggtcag atcctacacc tgctgtaatt gctaatttca
    16081 agttcggtgc tttttcaata cgttcacgag tcatatatgc aggataaaat ggcgcactaa
    16141 taatcacatc catatctggt aaatgtttat ctaagtcttc accattatct gctaatataa
    16201 tgaactcatg tcctctttcc tctaaaaatg tttttaatcc taatgctttt ttagtattaa
    16261 gtaattgatt ttcttgacct tctactgctt ctggaaataa cgctacgatt ttcatatcca
    16321 tctctcctaa atgataaatt ttgacttcct taaagtacgt gttgcatgtt gcttgtttta
    16381 aaaatatgac aaaaaaacgg caccgtttga cataccaccc ccttgaatta ttgttaaatt
    16441 caaagcgaag ttagcaaaca gcaccgtgta ccttacacca gcaacactta ttctattgac
    16501 ttatcgaaaa caaatattga aatgacttca tcatcattca aatcaatatc tgtaaataat
    16561 tttacgaact tagcgcctac aagactttcc atctcattta catctatttc tttatacatc
    16621 tgtttaatct tctctgtgcg tgtataatgg agcatcgatt cattgcgttt gtcgtttagg
    16681 taaaaactct caactttact caaaacacct gtcatatgtg caatcgccca attatcttta
    16741 aacgacactc gaatactatt gggtccttta cccacgtatt ctttacgata agatcttact
    16801 agattcgaga attgttgttc tttagtatgc gtatctatag tattcacctt ctttaaaata
    16861 agaagttcat taattgttca cattttcatt atacacctta taaacacttt ttcaatgata
    16921 acgattatta ttattacgaa atgtatattt tcctagttaa aaggatataa caaataaaca
    16981 gaaaatgttt ataaactaag atttatatta ttttaaaaaa tgtttcaaca aacgcatcta
    17041 aacaacagat cagcatatca tacttacccc ttcaactctg cctcaagttt acctaaatgt
    17101 cttaatgttg gtgtcaatgc tgcgaagaag aatccttctt ttaacttgcg aacttgtggc
    17161 gaatatggtg tgtacgctct tgaaccacca ttgacaacag aagcttgatt tacatctaac
    17221 aataaatagc caatgttctt cttcaatgat attaattcac ttaaatgtga agttaagtta
    17281 ccgtcatcta atattgcata atattcctct ctaagttgac gataacgttt tttaaaagct
    17341 tcaacatcat actctaaata ttgatttatt ccgttttgcg catttgaaaa tgcatcaatt
    17401 aactctaaag aacttttaat tgagcctaat cctattggaa tttggtaagc aataaattgc
    17461 gggcgaatag ttgccgcaaa ctgcttcgca tcatgcgtga tgatttgtga ttgtggcact
    17521 acgacttaat tcaatgtgat ttgatacgtt gctgacccgt tgacccctaa aaaatttgtt
    17581 ttttcaacga gagtgatacc atcttgattg gcacgtagaa tgaacatgac aaattcatct
    17641 gatgattcat gtttcgaaat cgcaccaaaa taatggtctt cttgaatatt acttacagct
    17701 ggcatacgtc cactgacaac caattgtcca tcaacataag tgtgttcaag gttcaacttt
    17761 tctaaatcat taaatgactt catcggatta gacaatccgg tagcacctaa tatttctcca
    17821 gataacaatt gctgttgtaa gtcattattt aaatgtggct gcgtggcatt ttctaaatac
    17881 gttgaaaaag ctaattggca ccataaacaa aatcctgttg tcaaacaaga ctgcgataca
    17941 gcttcgatta cttcagcatt ttttctcaat gccgcctcac cgaaataacc atctacaaat
    18001 aattgttgaa taaatgttct cggataatac gtcccttcat caacttctac taaatgagga
    18061 tctaattgtt ctttgataag cgtttctaaa gtcatcatca tctctcctta ttcaccaaat
    18121 cttctaagta taaactgctc aatataacta atgaatcgat caataataaa accaaataat
    18181 ccgataaaga atattgctgc taaaacatct tctaagttca acatatttcg tgcatcaacg
    18241 attaaaaaac ctaatcccga ttgtgcacca atcatttcac cagaaactaa aaatatccaa
    18301 cttgttccta ccgccatatg tatcccagcc atgatttgtt taaatgcccc gggaaataat
    18361 atattgcgat acaatgacca cccagttaaa tttaaatttg ccgctatttt taaatattga
    18421 ggttcaatgt ctctaacgcc tttaatagta ttgaacacaa ttgggaaaaa agcagcgata
    18481 aaaataatcg caatcgctgg caaactacca ataccaaacc atagaacaac aaatggtgcc
    18541 catgctatcg gagatatcgg cctaatcaat tgaaatagcg gttcgatagc gttgtatagc
    18601 caacgattcc ttccaagcaa gaagcccaat ggaatagcaa ccaacaatgc gacaacaaag
    18661 cccgctacaa atctccataa actaattgct aaatgttgga aaatttctcc agtaacaatg
    18721 aaagtccata tactttttcc tacaagaaca ggaccaggta acaatacagg ttggtaatgc
    18781 ccaataataa tgaccatttc ccaaatgcct aagaaaataa taaatgtgat aataggtaat
    18841 ataaatttgt tatttgtggg acgtgtcatg aacgcgatgc ctccttatac aatgacggtt
    18901 caacaaagtc atcatatgca ggtggattaa acaaatgatg ttgttttacc aatgtcgtaa
    18961 tttcttgata gccggatggc ttaattgtta aatcaccata ggatgtccat gccgctgact
    19021 gtgttaaaac gtcacgactt tgtttaaaat gatgcgtcat aatgtctaca ctttgcttgc
    19081 gatcattcat tttaaagcca gactttttat aatcttgtac aaatgcttgc gctacatcct
    19141 tgtgttgatc aagcaattcc cctctcagta ctagcacaca gcaatacgca tcaggtataa
    19201 cgtcatcacc atgtttcaaa gtcttacctt tgcctaactt ttcacccagt gcaccgaatg
    19261 gttcggctac agaataccct gtaattctgt gttcactcaa tgcggctggc atttctgctg
    19321 gcgacatttc atgatagcta aaatgccccg gtttaatctt taattgttta cgtaattcct
    19381 caagtaaaag ataatgtgtt gaataacgat gtggtatacc aaaatggtaa tcatcgccat
    19441 tattattaaa ttcatttaag tgcatacctt tttgtcccat aatgacattg ccttcatgat
    19501 ggcccaatgc cacagccttt atatttgagc ccttctgttt tgatttcatc gctagctcta
    19561 ttaaagttga tgcaccatca atacgaccac tgtttaatgc gtccattaaa tctggccaat
    19621 tattgaattt aactaattct agtttatatt tcggatgatt gtattgtgat aataattttt
    19681 tagtcatcat caaattagct gaatgtgtaa tcggcaaata tccaatttta atcacttgct
    19741 gattttgggc atttttagac ggttctttag acgtcctttg ccaatcgcat cctgtaatta
    19801 taaagattcc aatgatgacg attatgctta accttttcat cgtcactcac tccttataaa
    19861 taatattcag gttcaacttg atgatgattc aatgcaaatg tttccataat ttcattacga
    19921 atcttaagta ggtggctatc attacgactg cgtggatgtg atgctgtaat ttcatattga
    19981 gaaataatat tgcacccttc acctaacaga acaatgcggt cgaaaagata aatagcttca
    20041 tcaatgtcat gcgtcactaa aataatagtt gattgcgttt tatgttttag ttgcactagt
    20101 tgatcctgaa gtttataacg tgtaaatgca tctaatgcac ctaatggctc atccatcaat
    20161 ataacgttag gcttatgcac atgcgctcga catagtgcca cacgttgttt catacccccg
    20221 gacagttgct cgggaaaatg ctttcccctg ccttctaaat caactaattt aagctgtgcg
    20281 ttaatctctt catcactaat tttctgttgg aatccaatcc taatgttgtc attaatcgtt
    20341 ttccatggca gcagattatg atgttgaaat agcattaaac aatctggaga cggctgttgt
    20401 ttaatttcgt tatcaataat gacacgacca gatgatggat gaataaatcc accgatgata
    20461 ttgagtaaag tagactttcc gcaaccactt tttcctatga aagtgactat ttctcccttg
    20521 ctaatgtcca aattaaagtt atgaattact ttatgtgatc caaagtgatg ttgtaattgt
    20581 tgaattttaa tcatgacaag ccccctttta atccctacta ttttaatagg aattaagtgt
    20641 atatctaaag ggctatgcca aacacagccc ttatatcgtg aattgttata tctatagatg
    20701 attatggttt ggtatgagtg ctcttataac ataagcgtta ttcaattaac gacgttatat
    20761 taatttcagc tctactaaat ttcaataaaa tgattgtttt agacaatact tgcatttagt
    20821 tcattagttt cttcatatca actacttaca tttatagcat tgagctattc taattaactg
    20881 caatcaaaat ccacgtcaaa cctatataca tatatctcat caacttgttg tcttattaaa
    20941 gtttttcgat gccatcaatc ggtgtatcaa ctgctttgcg cgcgcgacgt accgcttctt
    21001 catcaggtgc gttgtataaa caaatacatt tagacatatc ttcacataca tatgtgcgtt
    21061 taaattcaac ttctggcact tcttcataat gaacagaatt tttcttttta cgtgctaaat
    21121 attgatccat cgtaatgcct tccggaatgt tccaagttac aaggtaatca acatgtgcat
    21181 caccattttt aacttcatct aaatctttac caactaagcg tacttctttg actaattgaa
    21241 tactaatatc tgcttctgtt aaaaattgtt tagcttctgc ttcgtcattt gcttccacaa
    21301 taaaataacc atgagttaaa ttttcagtag cttgtacttc aattaatgtt ggaattgtct
    21361 tcgtagatag tgatgctgcc tttgcttcta gttcttcttt cgttgatgca aaatcaagat
    21421 tgttagcttc taataaaaat aatgtcatta ataagacctc ctataacaat ggttgaaaaa
    21481 atattactat aattattatc agattacaag gatattaagc tattttttta aatatttaga
    21541 taaaattctg taaaatatat tttcaaagag tataaaaata atgttagggt ataagtaaat
    21601 aaacatatat atagggggct atcattatgg ataaagaatc tgtcgtagca agtttagcaa
    21661 gaaacaaaaa gattgctgta gaaacaatga ccggtcaaag gtacatcata gaacgcattt
    21721 tacatacaaa tgatgaaaaa catattcata ttttgaaacc taaagatgtc gtgttagatg
    21781 tagataccat caaagacatc gacgaaaatc atttagatga tgcaacataa gtataaaacg
    21841 aaacgtgcgc ctatgacata gattaatgtt ttaggcgcta caatgtttta tttatgttaa
    21901 tttgtcgaag tatggctcat ctaatggatt caattgcaag ttttcaattt gcaacgttga
    21961 atgtgcaatg ccatattttt ctttcaacaa tgatgatact tgatcaatcg cttgataatc
    22021 atcaccctca tattttttat ctaacacaac atgggcgctt aatgaataat gctctgttgt
    22081 aatactccac aaatgaaatt catgtacatc taatatgcca tctatgtttt taatatctgc
    22141 cataatttga tcagtatcca aatgttgagg cacactttcc attaaaatta accacgcatt
    22201 acgcgtaatt ttataaccac cacgtaaaat gatgagtgaa attacaatac taatgattgg
    22261 gtcgatgatg cgccatcctg taaagtaaat caatacaact gcaacgatga caccaataga
    22321 gttcaataag tctcccatga aatgccataa tgcactttga atattgatat tgtcttcttg
    22381 ttttaaagac cttacaagga taacagtcaa aataatattg acgagtaaac caatactagc
    22441 aatcataaac ataatgccac tttcaatggg ttgcggataa ataatacgta caatagcttc
    22501 atataaaatc caaattgaaa tcacaattaa tgctaatcca tttaaaaatg ccgctaatat
    22561 ctcaaatctt aaatatccga atgtgtagcg tgcagtcggc ttcttactag caaaataaat
    22621 tgccaacatt gacaaaccga gtgctaatac atcactaagc atatgaaatg agtctgacag
    22681 caatgctaat gaattagata ctaaacctcc aacaaattca atcactgtaa ataatagtgt
    22741 gatgataagt gatgcccata gcgtcttttt agaactttgt tgaatttttt gatgatcgac
    22801 atgatgaaaa tatttgtatc tgtttatcgt attcgccttt ttcccattca tacgtttgcc
    22861 actcctaaat aaatgcgtcg tatttaatat tgtcgctttt aaaaataatt ctttatagct
    22921 tctcagatta atattaatgc ttccggaatt aaccataatt tatacaccat cgttcttctc
    22981 atgacaactc attaatcttt accctttata cctttatgta atatcacctt ggaaaaaatt
    23041 ttgcagcaca ctcgctcttt gctttaaccc tagcatatag aaatttttaa taatgtacga
    23101 gattattgtg tgagttacat aaaaatgaca aaaaagtatc tcaaatttat tgtttagttt
    23161 cattaagttc aaaaaatcgc aataactttt atgattgttc cacatattaa aacaaacgat
    23221 gactttgcat attgaacttc atatttctaa atcaccataa ttcataaaca actctgtcct
    23281 tataatagcc gcatcgcaaa ttagcataat taaaaacagc agtaagatga tttgcaatta
    23341 aaaaccatcc tactgctatt attttagtca ttatatccta atatcatgat acgtgttcct
    23401 aaatattttg tttcgcttaa aatctaaaca actccgtaaa catgctaaga cttaccgcta
    23461 gactgcctgc aaacacgctt cagaaacgat atttattcta gtacaaacct tttaaagcat
    23521 tgcttgtatc aatataaata tttttaactt gttgatagtt acttaacgca cctttataag
    23581 tttctcgacc gatacctgat tttttataac caccaaatgg tgcgccttct ggtacttggt
    23641 tgtaagtgtt aatccaaata cgtcctgtac gaacagcttt agcaatattt aatgcacgtg
    23701 tgatattttg agaaaatacg ccgcctgcta aaccatactc tgaatcatta gctatatcaa
    23761 ttgcttcttg atcgtccttc actttaatca ctgttaacac tggtccaaat atttcttctt
    23821 gcgctaattt gtgatgatta tctggcacag caattaatgt cggttcaaag aagaatcctt
    23881 tatctaaccc attttcagtt aaacgatgac cgcctgctaa aatttgtgca tctgattctt
    23941 ttgctgcatc aatatatgat tgaattttat ctaattgatc cttaccagtt tgactaccca
    24001 tttgtgtagc ttcatcttgt ggatctccaa ctttaatatt tgaaaatgcc tcttgtaaac
    24061 gtggcaccaa ttgatcataa attttttcat gaactaataa tcgagaacct gcactacata
    24121 cttcaccttg gttgaataaa atacctaact gaatgccttc aactgcaagg tctaaattag
    24181 catcatctaa tatgatattg gcgcttttac caccaagttc taatgtagcg ggtactagat
    24241 gttttgctgc agcttcggca acttgataac ctacatcagt tgagcccgta aatgataatt
    24301 tatctacacc atcatgattg aaaattgcat tacctgattc tgaaccttta cccgttagta
    24361 tattgacaac acctttaggt aatacctctt ggaaaatttt agcaacttcc aataaactta
    24421 atggtgttga agacgaaggt tgaatcacaa ttgtattacc tgcagcaatg gctggcgcaa
    24481 tcttccatgc agctaatagc attgggaagt tccaagcaac aacagcacct acgacgccaa
    24541 tcggctcatg tcgtacgata ctcattgtgt ctttatcgat atcattcact gtaccttctt
    24601 ctgtttcaat aacacttgcg aaataatgga aatgtcttgc agcaaatgga atatcaattg
    24661 ctgttgtctc acgaatcggt ttaccattat ttaatgtttc aatcattgca attttatctt
    24721 tttgtgccat taatttatca caaatatcac gcaacatttg tgcacgttct gatttagaag
    24781 ttaatgacca tgattcaaat gcctcttgcg ccacttcgac tgcataatcg acatctttat
    24841 cttttgctct tgtaatatgt gatagtgttt ctccagttgc tggattagtc acttcgattg
    24901 tttcgtcact gctaccttta acaaattccc cattgataaa taaaccataa ttctctgcta
    24961 tataatctcg aacgtttact gccatattat ctctcctttg tttattggct ataatataaa
    25021 tctcttagca tcatatttaa taatgctttt aaacgatatg attcacatta tatagtaagc
    25081 gtttacattt tataaaataa tcagctcaca gaagtctcat ttttaaaact tttgcgtcgt
    25141 ttttgcacat aaaaataatc ttattttcga aaacatattg cacttttcaa aaataaaaca
    25201 cataatataa ctataatact tgagaataat tctcattaaa tagtttagtt gttatgaaag
    25261 cgcgcttaaa acgcgttaat gggacaagga taattcaaca acgtttcatt ttactgagtc
    25321 attgcactta tcatacacat tatatttagc atgagttata ttactaaaat aatattacat
    25381 gcgcaatagt actagaatgg agttttttca atgcgactta ttttaatcgt cattggctta
    25441 atatttacag cgcttggtat tgcaggtgcc gtattacctt tactgccaac gacccctttt
    25501 ttactcgtag cagttttttg ttttgctcga agttcagatc gcttttacaa ttggcttatt
    25561 aatcaaaaaa tttataaaga atatgtagaa aacttttatt tacatcgagg ctacacgcta
    25621 caacagaaaa ttaaaatttt aattagctta tacattgtaa taggtttttc aatttatatg
    25681 gtggatgttc ttgcagtccg tgtaggatta atcatcatgg ttatcataca gaccgctgta
    25741 ctctttacat ttgtaaaaac attacccaaa tcaaatcata aaatagagga gtgattgccc
    25801 atgtttatgg cagaaaatag attacaatta caaaaaggca gtgcggaaga aacgattgaa
    25861 cgtttttaca atagacaagg tattgaaact attgaaggct tccaacaaat gtttgtcact
    25921 aaaacattaa ataccgagga tacagacgaa gttaaaatct taactatttg ggaatctgaa
    25981 gatagcttta ataattggtt gaattccgat gtatttaaag aagctcataa aaatgtacgt
    26041 ttaaaaagtg atgacgatgg acagcaaagt ccaatattat caaataaagt attcaaatat
    26101 gatattggct accactatca aaaataaata tattaaaaac ccctagtcac cgctggttgt
    26161 ctaaaccaac ttcatgatta gggggttttt attatttgtg acgtaaaggt atgaattcat
    26221 ccggcttgtc tgagcgcaat ccaaaataat attctattgc ttcacaaata cgttgtgatg
    26281 cttgtccatc accatatgga ttattcgctt gactcatacg ttgatacgct tcatcatcct
    26341 caatcaattg tttcacattt cgaacaatat tgtcataatc tgtgccaatt actctcgatg
    26401 ttcccgcctc aacgccttcg ggacgctctg tatgattcct taataccaac acaggttttc
    26461 caaatgtagg agcctcctct tgaataccac cagaatctgt cagcacgagg tacgattgat
    26521 ttgtaaaatt atggaactca atcgcatcta atggctcaat taattcaatc cgatttctcc
    26581 cagataaata tttttcggca atcgctctta cctttggatt acgatgcatt ggataaatga
    26641 agacaacatc tttatattca tctgccaaat ctcttactgc tttaaaaatc tgatgcatcg
    26701 gttccccaat attttcacga cgatgcgctg ttagtaaaat aactttcttg cctttatgtt
    26761 tattaataat cgttgaaaca aaatcatttt gaactgttgt tgacaatgcg tcaataactg
    26821 tatttccagt aataaagata ctctctttgt ctttgttttc aaaaagtaaa tttttagctg
    26881 caattactgt tggtgcaaaa ttcaattcag caatattact taccatgact cgatttaact
    26941 cttcaggaaa tggcgagtat ttctgatgtg ttcgaagtcc agcttctaca tgtccgaccg
    27001 gaatttgatg ataaaatgct gccaaacttc ctacaaaagt cgttgtagta tcaccatgta
    27061 ctaaaatcat atccggctgt tcctcattaa tgatgctatc aagtttagca agcgtattcg
    27121 cggtaaggtc cgctaacgtt tgttgatctt gcataatatt taaatcatga tcagcttgaa
    27181 tatcaaatat acttaacaca ctatctaaca tatctctatg ttgtgctgta atcacaatgt
    27241 tcgcttcaaa gttcccatta tgatcaattt cttttactaa tggtgccatt tttattgctt
    27301 cgggtctcgt accgaaaata accataattt ttttcataac attatcctct ctgaagttca
    27361 aacacataac agcttatctt tccttaatca tgtatgccct agtttgacac attttatttg
    27421 tcgataaaat taaatatatt gccataatta taatacgata catcttcaaa tgatgatttc
    27481 acaacatttt ttgtatcaaa aatcacttta tgcttcattt tatcaaaatg actgtccgat
    27541 aaatttttaa attctgagtg gtcacttaaa atcaatacta gcgatgcgtc tttgacagca
    27601 tgtgacatat catgttctac aaaatctaat gcaacatgtg gatcataagc acatacttct
    27661 atgtctggtt cttgatttaa tagctcataa atatcaaatg ctggtgattc tcttatatca
    27721 tcaacatcac ctttataagt taaaccaaat actgtgactt tattcccgct caacgcttta
    27781 atgatttgtt tcgttgtatc aacaacatag gccggcattg aattattaat ttcacgtcca
    27841 gtttgaatta actttgcatt ttcagggtct ttagcaataa taaagtacgg atcaacagct
    27901 aaacaatgac cgcctacacc tggaccaggt tgatggatat taacacgcgg atgtttgttt
    27961 gccatttcaa tcacatctaa tacattaata tttaagttat tgcaaatttt tgttaattca
    28021 ttagctaaag aaatgttcac gtctctatat gtgttttcca ttagcttact catttcagca
    28081 gtacgtgcat ctgtttcaat catttctccc tgaacgaatg tgcgatagac acgtttaccc
    28141 gcttcaatac aagctttagt cacaccgcca atgatgcgat tgttatgaac taattcttct
    28201 aaaatttttc ctggcagtac acgttctgga caatgtacta aataaatatc ttcacctatt
    28261 gtaaacccta aattttcaat gaccggtttt acaaaatcat ccatcgtttt aggcgcaatt
    28321 gtcgactcta caataatggt atttcctttt tctaaaaatg gtaaaatact atctaatgca
    28381 tgcataacta gcgaaatgtc acatgaccgg tactgatcat cattattcgg cgtcggaacg
    28441 gcaatgataa aaacatcaga tgcttctggc gttgtagata ccttcaattt tcccgatgac
    28501 agtacctctt cataaacctc ttgtaatcca ggttcttcaa tactaatttg accactttgt
    28561 aacttatcaa tcgtttgctg attaatatca acaccaagca catcgacgcc atgctttgca
    28621 aacataattg atgttggtaa accaatataa cctaagccaa ctactgttaa cttcatacta
    28681 taacctccaa ataaaacgat ttgtatgttg attttattta atagatgact tatgccttat
    28741 ctttggttgt cgtttcatcc atgatgtccg caataacaag tgacattttt ccaggaataa
    28801 cttcaagtgc attattattt tcatataacg tattgctgta tattaaattg ccgaataatt
    28861 ttctaaagac caacaactta ttaaaatact tatttagcat tgaaggcatg ttgatcaata
    28921 ccgttttatg atgtgattgg cgacgtattt catacattac tgacgatgta tcaaagtaaa
    28981 aactatcttg aggatgatac acgcctgtca cttctaatga tattaattga tcaataaatg
    29041 ctgtcagatg tttaatatat aatgcactgc gctgattgtt aatatttgga atgattggca
    29101 atcgctttga caattgcatt aaccgttgga aatttcctgg gcaatgtgca ccataaatca
    29161 ttggtggtct cacaattgct actttaaacg aatcactaat caactcttgt aatgcttgtt
    29221 cagcgaactt tttggaaata ccataattgg tcgtagggtt cattggtgtt tgtgtatcaa
    29281 tttgatctga tttaccaacc tgaccttctt ttccataaac tgccatagta ctcataaaaa
    29341 taaattgttt aacgtcttca gctttagcct tttgtgccaa ttgtttcgta agcaacatat
    29401 tcacttgcat ataatcagat agccttgctt gaggtgaatt gttgtgaacc aaagctgctg
    29461 tatgaattaa aacatcataa tctttgaacg aggtcgactt ccataattga ttcctaacat
    29521 taatttgatc tacttgatgt ccttgttcaa taagcttatc ttttaaagca ttaccgatat
    29581 atccatgtac gcctgtaatt aaaatatttt ttctcattag tgatgcacac cttctgaagt
    29641 aacgatattt ttaattgttt tatatatgat atacatatca agcatcatag attgatgtgt
    29701 taagtaataa tgatcatacg ctactttttg atcatcagta atatcatctc tccccatcac
    29761 ttgagctagt cctgtcacac ctggtctaat cgtatgcacg ttcgcttttg tacgtttttc
    29821 gattaattcg tattgattat aaagcgctgg tctaggacct acaattgaca tttctccttt
    29881 taaaacattc aataattgtg gcaattcatc aatagaggtc ttacgaatga ccttccctgt
    29941 ctttgttata tacgatgttg aatccattaa atcagttgca acattaggtg tgtctatttt
    30001 cattgatcta aacttataaa tattaaacaa ttcattatta atcgtcggtc ttttttgttt
    30061 gaaaatggct ggtccaggtg attccatttt aattagtaat gctgtaatta acagaatcgg
    30121 acttaaaact actaaaccat atattgaact cactacatcg aataatcgct tcataattat
    30181 ctcctcactt caacagattg taatacttca tagtattaat ttctctcgta tatttatctt
    30241 taaacagttg atgtgcgcgc tcacccatct cgtgcaattc cttactcgag tgagtgttga
    30301 tgaagttata aatggcatgt gcatcgccat tatcaatttg gatacccgca tcatattgtt
    30361 caacatgttg aacgatatca gattgcttat ccatgatgag taccaacggt ttcttagctg
    30421 caaggtagcc ataattcttg ctcggcacgc ctaaaccgac gccttcttta atcagcgatg
    30481 caatacatac atccgcaatt tttaatacgt cagcatagtc tgtacctgtt aaaaactcaa
    30541 acattttaac attttcaata cgatggtctt ctattgccgt tttgacatct gcaaatttct
    30601 taccatgacc acaaagtatt gttaacgttt gaggctgatc cttatttaat tttaaaaatg
    30661 agataagtgt ctccatatcc tgtaactgcc ccatattacc gctatacaat aaaattttgt
    30721 cgtattgctc acggtaagct ttaaatgtat cattatagat acgattgtct tgtaattgac
    30781 gcatgtcata ccagttagga atcacatgga tattgtcagc atttttagaa atttgatgat
    30841 ttagtaagta gtttttcatt tccgtaccaa ggacaatgac attttcagca ttcttgtaga
    30901 catgtctatt aatgtaacgc atcagcttat caatcatgct acctggacga gttgcacctg
    30961 tcttaatcgc attatcaggt gctatatcat acaccacaaa agaatatttt ttcttaagca
    31021 gtctgtgtaa aacgtctggt attaatggca agattggtgg attagagtaa acaagaatct
    31081 gatcatattt caacatttta ggtatattaa tcacgaattt tgaaaataaa ctaaagaaat
    31141 tgatgatcct tccaacctta cttttgttat taaacctcga atacttgaga cgtcgaatgc
    31201 gaataccacg atgcatctcg gttttagaaa cctgtttatg attactatat tcatatggcc
    31261 atccacacat gacatcgaca ttaatgtgat tcgcaattaa atcttccgcc aattgagttg
    31321 gtaacgtcgc agaagataca tattccggat aaaaatactg acataaaatc aaaatctttt
    31381 tttcactcat ctaatcgacg tcctttttat taatgaattt agactttaaa cctataatat
    31441 ttaaaatcac atacttaata atgttgctga acagcgttgt ccaaaagaat ccatttagac
    31501 caaacgcaat tgtcattaaa atagttatga atataaatgt aatcgtgtga aacgtcatat
    31561 aattcgcttg taatgttatt gatgcgtgtt ttgtatttaa agtttggatc ataatactca
    31621 ctgcattgaa taaaacacct atattaccta aaataataaa cttcgaatat aaacttgaat
    31681 caatgttata cagtaaagag acaataatta ttgtaattgg ataacatata atcatgacta
    31741 aacatagggc agctatagca aatagattag ttttcaaata ttgtttcttt atattgtcac
    31801 tttcatttac agaaatatgt gaaagcacta cattattaat cggatacaga aatgtagcta
    31861 acattttccc aataaatgtt gaaagaaatg atatagttac agctgttcca cctataattg
    31921 gtaataagat taatctatct aagtagagat tcaaattatt aaggctattt gtactcagta
    31981 gcatcacata atcttttacc acattattat cttcactttg atacgcgcct atagttaatc
    32041 cccgtaattt aaccaatgta tatatcgttg caaacaattc actggtaata aaacaaacaa
    32101 tccagttttg ggttaaataa tatagaagta gtcctatcaa caaacctaaa aattgaataa
    32161 gagcaatata caaaatctga ttatatttta aagtcatcct aaaaaataca ttcagataaa
    32221 tccttaagca cattaaaata ttaagtagaa ttaaaaagat aatatcgatg gtgttcaaat
    32281 taaaaaagta aagaaataca ataattaaag ctatactctc aatcagaatt gaaattaaaa
    32341 gtatcaacac aaatttccag tagtaatgat tggatttgta tagattcata ttaatcaatc
    32401 gtatattgtt aagcgtattg cctaatacaa cactcgtgat tgttattatt gtataaatcg
    32461 ttaaaataga accaaacgct tcattaccta ctcgttgatt aataattgga taagctaaaa
    32521 attgtaatcc taaagctata agcaacgtac caattattgt ctttacacta tccataataa
    32581 aaactttctt aaccatgatg acgccgtcct tttgtaataa aatagaacaa cacaaaccaa
    32641 aattcactta caactaaata atttgaacta aacattaata atgtgattgg atagattgct
    32701 ataaacataa cgagtaaatc tatagtgttt ggatcatagt tcctaatcat tttataaact
    32761 agtagcaaaa tgcaaatcat tatgataaaa aaccctaata agccaaatga tagaatcaac
    32821 tcaataatga tgttatgtgg tatatttccg attagtttat aatagttaaa tggcccatag
    32881 cctaataacg gactttgttg aataaagtaa ataccttttt cataaatcgg tcctcttcca
    32941 gaagtacctt ctaaattaag tgttccacct tgtagatatg aaaatgttct agtattcgaa
    33001 ccttttgtaa aaagaaagta aatcaataca ctagatatgc ttaatgcaga aatatacata
    33061 atgcttttta ctgcaatagg tattcctctt ttaaacgtaa taagtataaa tgcaaataag
    33121 ccgtaaagaa ttaataaaat agcacctcca cgccctcctg gtataaacac aatagggata
    33181 tcaattattg taaatagaac atatatccac ttatgtttca ctgaaccttt cataatgaaa
    33241 taaatgccta atccggcagt aaatgctgaa aggtacgaag cgttttgata gttcataagt
    33301 ccaaaattga tatagctagg tatctcacct gtaagttttg gtattaaaat tacaaaaata
    33361 aatgaaacag aaaatatgaa aaatactaat ttaaaaaatc tttctaccgt agccttgttt
    33421 atatatttaa tataaatacc actaattgcc gctggaactg cccatgttaa aaagaataga
    33481 atattatttt tagctagttt ctcttcctta tctggtgaaa aataataaaa agctagataa
    33541 agcaaacata tagcaattaa taatattaac cctcgcggaa tttcttgcgt gacaattatc
    33601 ttataaatag caaacaccgt agtaattaat gctataccaa ccatggttga gtaatacacc
    33661 ggctctatag ggaaccctaa tacttcttta gtaaatgtag agattactat aaatatgttc
    33721 atgctgataa ttgcacaaag tacaaaaaat ttcatagttt acctctcttt aaaatttata
    33781 taattttact aatcgttcac tttctatttg ccaattcaaa attttagacg ccttaattgc
    33841 attttgacgt aaatgattaa acaaatcgtg attatctctt aattttctaa ccgccttttc
    33901 aatttctaac ggcgtaactt cctttagaac aatgccaaat ttatattttt cattgagata
    33961 aatatgctct ttgacaggag ataaaattac tggtaaacca gcatgtatac attcaaaaat
    34021 tttattagat actgtatatt caaaattaat agatacaggt ttcgtcaaga caacaccaac
    34081 attactttct gctaacttat caaccaattc ttttacttca actggtttat ccaacctaat
    34141 attttccggg ttataactaa tcagttcttt tatcacttct tcatgcggac caaaccctcg
    34201 aattatgaat gaaggggcat tttgtttaaa agctgatgaa gctataataa actcttcata
    34261 tcctctgtcc attacaattt gaccttgata tacgattgat ttaaagtttt cgatttcttt
    34321 aaattctctg ctatcattta aaataggtgc attcgtaata acattcgctt ccttcttata
    34381 tcctttagat tgataatatt cttttgctgc atgacttact gttacgaagg cattaacacg
    34441 atgttttaca atgtgttttt ctatactttc tacaaacttt gaaataagtg gaactttatt
    34501 aataaaggca tttttcgcat atatttcatg cgcatcataa acaatattag cttttttata
    34561 attgcttaaa tagaccatta ataatacgtc gaaatcattt gcatgtatca cgtcaggttt
    34621 ataagcttta atttctcgga taacacctgt tgcaaatctt atacgcttaa ttaatttaga
    34681 aagaatattt tttggatcta ccttgctacc taacaaacga taattacaat ctaaattttc
    34741 caatcgctta ttagtagctt gtgaattatt cattccaaca attttataat cattcgtaac
    34801 gcctttaatt gtttctattt gtttaagtac ccttgggtct tgaacaatat tactcgatac
    34861 aatatttaaa attctcatat cattaagtat cctttttatt taaatattca accgaaaatc
    34921 cttttagttt gtcaggcgtt ttctcccacc acttgctttc caaaagtttt tcaattgttt
    34981 tattgtcaaa tcgcttctta atcacttttg caggaacccc accaacaacc tcatatgctc
    35041 ctacattttt agtaacaact gagccggctg ctatgactgc accagtattt attgttaatc
    35101 catccataat aattacattt gcaccaatcc acacatcatt tttaattgtt gtacggcttg
    35161 gttggtcatt aaagtctata aacttttgct ttatgttaaa tggattatta ttagaataaa
    35221 aaatcggtga tgagctaaaa aagtgtgtag gatgttttcc taacccaatt tttacatccg
    35281 aagatatcga acaatatctt cctacttcta cattattaaa atcactacca aatccaatat
    35341 aactgtattc accaatgtga gaattcctga ttttacacca tctatctata tagttattgc
    35401 catcaaattt tgagtttgta atatacgcca agcgatgaat cttaacattc gattctttag
    35461 aggactggtt tttcagcaaa ccaattatct tttcaatcgc tatcctcatc gtcatttcct
    35521 ccaagtattt cgattgataa tatctttata gctttgaata attttaacta cctttgtcga
    35581 aacattagtg tctttataat caatagcatc aatcatcggt tcgttattgt tttgcatctc
    35641 tcttgctagt tcaacggatt ggattagatt gttataggta ataccaccta caataaccgt
    35701 acctttatct agtacttccg gtctttctgt ggaagttcga ataaggacac cagggaactt
    35761 caaaatagac gactcttctg acaatgttcc actatctgat agcacaacaa atgcatcttt
    35821 ttgcaatgca ttataatcaa agaaaccaaa tggctttaac tgtttaacta gtggatcaaa
    35881 ttcaaattta ctttcttcaa ttttcttcca acttcttgga tgcgttgaat aaatcacagg
    35941 cattttatac tttttggcaa tatcatttat cgcattcatt aatgatttaa aattcttttc
    36001 attatcgata ttctcttctc tatgcgcaga tactaaaatg tattgttgcg gttctaatcc
    36061 tagtttattt aaaacgtcac tgtgattaat tttatctcga tgcgcttcta tcacttctgt
    36121 catcggtgat cctgtcacaa agatattcgc tttattgaag ccttcatcta ataaataacg
    36181 tctgctatgt tccgtataag gtagattcac atcactgaca tggtcaacaa ttttacgatt
    36241 gatttcttca ggtacattct gatcaaagca tctattaccc gcttccatgt ggaatacagg
    36301 aatttttaat cgtttagcag atactgctgc taaacaacta tttgtatcac caagaattaa
    36361 aagtgcatct ggttgttcgc gtaataaaac gtcatatgtc ttcgcaataa tattccccat
    36421 cgtttctcca aggttacttc caactgcctc taagtagtgg tccggttgtc ttaattccaa
    36481 atcatcaaag aaaatttgat tcaatgtata atcataattt tgaccagtgt gtactaatat
    36541 ctgattaaaa tattgatcac atgctttaat cgttgatgat aaacgaatga tttcaggcct
    36601 tgtaccaact attgtcatta atttcagttt ttccatgcgc tatacctcca agaaatacgt
    36661 atctggctga tttggatcaa acatttcatt cacccacata atagttacca tatctgtgtc
    36721 gcctaaattt tcaatattat gtgtgtatcc tactggtatg tctacaactt ctaatttgtc
    36781 gccagaaacg taatattcaa tgatttcatc atcattaaca tgtctaaaac gaattacccc
    36841 tttacctgat acgactagaa atttttcgtt tttagtatga tgccagtgat tacctttagt
    36901 aatacctggt ttagaaatat ttacagaaac ttgaccacga tccggtgttt ttataaattc
    36961 tgtaaaagaa cccctatcat ccacattcat aagtaaggga taactaaagt ctgtactagg
    37021 tagatagctt aaatacgtac tatacaaatc tttttcaaac aagttatcta atttcggcaa
    37081 tgttcgatcg agacgtgact gtttgaactt gtataataaa tctacaattt ctcccaatgt
    37141 cactttaaat acgtttggta ctgtaggtac accattttca atcgttggag ttccttcaat
    37201 agcacgtttt atttcagcga cgatatcatc cacgtagttt agcgtcagtt caacattccg
    37261 atcattaact tgaatctctt cgttacgtgc aattttgtaa caaaatgttg caatcactga
    37321 gttataattc ggcttacacc acttaccgaa taaatttggc catcgataaa tataaaccgt
    37381 attgccatac tcttcggaat actctcttaa tagctgttcc ccttgcaact tactctcacc
    37441 ataaggatta tcttgtgttg cttgtattga agacgataat aatatcgccg gctttttctt
    37501 atttctagtt aatatatcaa gtacatgatc taaataactc acgtttccta agctgaattc
    37561 tttgtcgtgt tcaggtcgat taacacctgc taaatgcacg acaaagtctg ctttcaacaa
    37621 cgctgactct aattcttcct ctttagtttg tcgatgtact tcgaaaatat gataatctgt
    37681 cgttgatgtt aaatctgctt tcaagttttt tcctacaaaa ccctttgctc ctgtaattac
    37741 aatattcaac gtcaatctct cctatctcat tgaagcttta taatcgttca attcgtttct
    37801 aacatattct agtgttaaaa gtttttcttt tatctcttcc accgttaaaa tatgtgtatt
    37861 atcggagtta tattcataag attgcgtaat cttttcgtta ccggtttcaa cataattact
    37921 ataatttaaa tctctggagt ctgccggcac tctaaaataa tcacccatat cttcacattg
    37981 tgcgtattct tctctcgtca acaatgtttc tgcttttttc tctccatgtc gcgtaccaat
    38041 gatttcaatt gcattatcag cttcaaacaa ttctaataat gcggtcgcaa gatcccctac
    38101 tgttgagctt ggtgcttttt gaaccatgat atcgcctgtc tctgcatgct taaatgcatg
    38161 aacaactagt tccacggcat cttctaaact cattaaaaat cttgtcatat caggatctgt
    38221 aatcgttaaa ggttctccag ctttgatttt gtcgataaac aaaggaatta ctgatcctct
    38281 tgaagccatc acattaccgt atcttgtacc acaaataagc gtttgttcac tacgaatatt
    38341 tcttgatttg gctatgaata ctttttccat cattgctttc gaaataccca tagcattaat
    38401 aggatacgct gccttatctg tagataaaca tatgactttt ttaacatttt gatgaatagc
    38461 actttgtaag acattttctg taccaataat atttgtcttc actgcctcaa ctggaaagaa
    38521 ttcacatgac ggcacttgtt ttaaagctgc tgcatggaat acgtaatcaa catctcgcat
    38581 tgctgtttct acactttgac tatcacgcac atcaccaatg tagaacttta attttgaatt
    38641 attatatttt tttcgaatgt catcttgttt tttctcatcg cgtgaaaaaa tacgaatttc
    38701 tttaatatta gaatctaaaa accgtttcat aacagcatta ccgaatgatc ctgtgccccc
    38761 agtaattaat aaaattttgt catcgaacat aattatctcc ctttttgcca ttggcatagt
    38821 taataatttt ttctttacta aagtcattga cgatgtcttg aataatggct tcaacttcat
    38881 tacatttcat atgttgtact ttgccacgat aaattttttc aaatacttgt tcaggatgaa
    38941 cttcatcttt attcataagc tcttcaaaca ttttttcgcc ggatctaatc cctgtataag
    39001 taatgcgtat gtcgtcttct tttttaccac ttagcttaat taaattacgt gccaaatcta
    39061 caattttcac tggttctccc atatctagca caaatacttc gccaccttct gctaatgccc
    39121 ctgcctgcaa aactagtcta gaagcttcag gaattgtcat aaagtaacgt gtcatttcag
    39181 gatgtgtcac agtaactggc ccaccttctt caatttgact tttgaaaagt ggaatcacag
    39241 accctctcga tccaagtaca ttaccaaatc tcactgcaac aaaatttgtt tgatgtgttt
    39301 catcatttaa actttgaata atcatttctg caattcgctt tgaagctccc atgacattag
    39361 gcggattaac ggctttatcc gtcgaaatca taacgaattt ctttacctct gcatttttag
    39421 cagcttcagc agtatttttc gtacctaaaa tattattacg tactgcttct tcagggttgt
    39481 cttccattaa cggcacgtgc ttgtgtgctg ctgcatgata aactgcgtat ggtttataca
    39541 tttccaaaat ttcaaacata cgcgctctat tttgcacatc cgctataata ggaacgatat
    39601 caacattttt tccgaagcga tttcgcaatt cacgattgat taaataaata ctgttttcac
    39661 catggccaag tagaataata cgttctggat agaaattaca aacttgtcta caaatttctg
    39721 atcctattga accacctgca cccgtaacta aaatagtttt attcgtcaat tcatttgata
    39781 tcatatccat atctaattca acaggatctc tgcctagtaa atcttctact tcaacttttt
    39841 taagttggtt cacttctaac tcaccagaca tgacgtcttc tatatttggc attttcaata
    39901 actcaacgcc atccatatgg caaatattat taatttcttt caaacgctct tgaccaatag
    39961 ttggaattgc aatgatgatt tttttaatct tatatttcct cactagttct ggaatatccg
    40021 caatttcacc ttggactttt acaccctcag taattgtgat attgcgttta tgttcgtcat
    40081 catcgactgc taataccggt tcaagtttca tttcgtcact tttcaacatt tgtctaatca
    40141 gcattgaacc tgcttggcca gcaccaacaa ctaaagttgg cttcttatta aatgacttac
    40201 ctccaaggta tttccgataa atacgccaaa ataaccttga gccacctatt aaaatcaagt
    40261 gcatcatcca agtaattaaa tacaatctaa aaaacggtct attgcctgta acaattgtca
    40321 cgaccaccat cgtaataacg atagatgtcg tcacagcttt aacaattaaa atcaattcac
    40381 tcacactggc atattcccac gctcgatgat acatattaaa aataaatgct gaaatatgat
    40441 gcgatatgaa tagtgatata gctgccaata ttaataattt gacagaatat gttttgaaat
    40501 acggttctaa aatgtaataa cttacgaata ctgaaaatgt cactatcagt gaatcgatta
    40561 atgctagtat taaaagccgc aatttcacag ataaatgtgc cataaaaccc ctcatttgct
    40621 gtttataacc caaaccatct tttctgttta taatcttgtt gtggcattcg tttaggaatt
    40681 tttttatcat caacaactaa cttcgcatta ctaataaatc cgttcatatc ttcataataa
    40741 tcacgtaatt tcttatcatt aaataagtct ttcattaaga acggtctgat ttctgtgtta
    40801 tgcgcatctg aaccgatgaa atgtgtcaga ttgttttcaa tcatttgaat tgctaatttt
    40861 ctaatttttt taccggaaat acccgctaat gacgccgttg tcacttgact taaagcacct
    40921 ttgttaatta aatcgtatag tatgtcaagg ttttgactta ttgctttatt ccgctctgga
    40981 tgtgcaataa tcggtacaaa gcctttactt tgtaattcga aaaataattg atcagtatag
    41041 tgtggaactt catttgatgg aaattctatt agtaaatagc gtgaatcatt aataccggta
    41101 ataacttttc gatcaatatc attaaggatt tgatcggtaa ttcttatttc ctgaccataa
    41161 taaaacttta gattcagtgc ttgtacttcc tctaagcttt caatatggtt taaacatgat
    41221 ttcacttttt ctataggtgt ggtatatcga ggatgtaagt gatgtgatgt tacaatgatt
    41281 tctgtaacac cttgtgttgt cgcttgtttt aaaagatcta gcatctctgt ttcatttgtc
    41341 ggaccgtcat cgatattagg caatatatga ttatgaatat caatcatact tattcatctc
    41401 cataatagtg ataataacta gaagatttat ctacttttgc cttatttaaa atgacgccca
    41461 gaatgttact gcctgctttt tccataagta ttttagcttt tttaacttca tttttatcat
    41521 ttttttcact atcaatgact aacagactat ctttaatagc acgcgcatat agttgtgcat
    41581 cagtcacggt attaactggc ggtgtatcga caataataat gtcgtaacgt ttattgaaaa
    41641 gatcaactaa ctctttaaat ctttcagaac caattaattc tgttggatta ggaggtacag
    41701 gaccagctgt tagtaaatct aaattatcaa tttctgtcgt cgtaatagct tctgacatag
    41761 tcgttctacc aatgattaaa ttcgataatc cattattatt ttgttcatta aaaatatagt
    41821 tttgtgttgg cttacgcata tccccatcga taattaacgt tttataacct gcttgtgcat
    41881 acgtaatcgc tacattggat acgactgtac ttttacctgc accaggtttt tcagaagtaa
    41941 ctaataagcg ctttacttcg ccatttgctt ttgaaaacat gatgtttgaa cgtatacccc
    42001 gaaacttttc actaattgtt gattttggtt tttcatacac aaatagtgtt gttgtcgtat
    42061 tttccttttt tgacataagt agcaaccatc cttaattaaa tttttgaatt gaacccaata
    42121 caggcaatcc taattctttc tctacatctt cttcatcttt aattcgctta tcgaaaatta
    42181 ctttgaagaa gatatatata agcgcgacaa ctaatcctaa aaagaatgca ccgattagat
    42241 tcactacagt ttttggtgcg actttaactg ctgtaccgtc tgctttagat aaaattgata
    42301 cgttatctac actcataatc ttcggaattt gtttacttgt cactttggca aagctattcg
    42361 caattttttc cgaatcttcc ttatgaccac ttttaacttg gatgttgata agttgtgtat
    42421 tttcttgatt cgtaattgtc aacatgctcg acaatttaga tggtgaatac ttatcattta
    42481 agtcctttga cacttcatct aaaattctag gacttttaac aatttcttta tacgtattta
    42541 caagttgaat attactttga acctcttgtg ccataaactg aggattgtca cccttagttt
    42601 gattcactaa gatttgagta ttagcttgat atttaggtga taagacgaaa aatgtaacaa
    42661 tagcgctaat tattaaaaat aatagcggta aaataattaa aattttcaag tttttttgta
    42721 atacttcttt aatttttgtt aattctaatg tactttccat tatttacctc ccttaaaaat
    42781 tttcatta
//
LOCUS       DAKPJH010000009        40087 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.009, whole genome shotgun sequence.
ACCESSION   DAKPJH010000009 DAKPJH010000000
VERSION     DAKPJH010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 40087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40087
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.009"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            35..517
                     /gene="purE"
                     /locus_tag="OY092_000394"
     CDS             35..517
                     /gene="purE"
                     /locus_tag="OY092_000394"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HCX1075368.1"
                     /translation="MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMM
                     VQFASEARESGIDIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQ
                     MPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNHYESSLIQKVEDMQNELQ
                     "
     gene            504..1628
                     /gene="purK"
                     /locus_tag="OY092_000395"
     CDS             504..1628
                     /gene="purK"
                     /locus_tag="OY092_000395"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HCX1075369.1"
                     /translation="MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVAVLDPAEDC
                     PCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAI
                     QLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQV
                     LINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITYFPLQENEHRNQI
                     LFKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSG
                     HYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWH
                     LHIYGKSERKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN"
     gene            1632..2336
                     /locus_tag="OY092_000396"
     CDS             1632..2336
                     /locus_tag="OY092_000396"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HCX1075370.1"
                     /translation="MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKG
                     RLNNQITSIIFKYLQENGIESHFIKQLSETDQLVKPVKIIPLEVVVRNIASGSITKRL
                     GFENGEVFREPLVEFFYKNDALNDPLITDDHIKLLNIAIDKDIETLKTKALEINQVLK
                     QLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGS
                     LIETYQIFLNKLEDLK"
     gene            2336..2599
                     /gene="purS"
                     /locus_tag="OY092_000397"
     CDS             2336..2599
                     /gene="purS"
                     /locus_tag="OY092_000397"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HCX1075371.1"
                     /translation="MKTIELHITLQPQVLDTQGQTLTRAVHDLGYAQVNDIRVGKVLY
                     MTVDEVSDEKVHNIITTLSEKLFANTVIEEYSYKVLDDEKENA"
     gene            2601..3272
                     /gene="purQ"
                     /locus_tag="OY092_000398"
     CDS             2601..3272
                     /gene="purQ"
                     /locus_tag="OY092_000398"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HCX1075372.1"
                     /translation="MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGV
                     LIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALL
                     HNDSHLFISRNEKLEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKANN
                     QIILKYANNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSW
                     REQHV"
     gene            3265..5454
                     /gene="purL"
                     /locus_tag="OY092_000399"
     CDS             3265..5454
                     /gene="purL"
                     /locus_tag="OY092_000399"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HCX1075373.1"
                     /translation="MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTET
                     GIFSVMWSEHCSYKHSKPFLKQFPTSGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNH
                     PSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGG
                     YGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKT
                     GRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGA
                     AGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKF
                     LDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKDYNT
                     SKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTN
                     KAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIY
                     QQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDF
                     EPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGL
                     LSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSGKTLNI
                     DNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD"
     gene            5433..6917
                     /locus_tag="OY092_000400"
     CDS             5433..6917
                     /locus_tag="OY092_000400"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HCX1075374.1"
                     /translation="MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIV
                     VSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHF
                     YDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKES
                     LRKIKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQ
                     DIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKK
                     LAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQ
                     GVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKDSGANKVHVRIASPEFMFP
                     SFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVE
                     SFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV"
     gene            6910..7938
                     /locus_tag="OY092_000401"
     CDS             6910..7938
                     /locus_tag="OY092_000401"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HCX1075375.1"
                     /translation="MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGAT
                     FDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYF
                     LDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGA
                     VEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVF
                     LEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIF
                     DWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDASRALKILAEQNVEAYQIGHIVKNES
                     TAIELLGV"
     gene            7941..8507
                     /gene="purN"
                     /locus_tag="OY092_000402"
     CDS             7941..8507
                     /gene="purN"
                     /locus_tag="OY092_000402"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HCX1075376.1"
                     /translation="MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFC
                     IDRAKKHGIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASF
                     AGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRP
                     DDSKEQLEEKVKKLEYELYPSVIAKIVK"
     gene            8522..10000
                     /gene="purH"
                     /locus_tag="OY092_000403"
     CDS             8522..10000
                     /gene="purH"
                     /locus_tag="OY092_000403"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HCX1075377.1"
                     /translation="MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVP
                     VRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLY
                     PFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYHEVLTRLRNDS
                     LDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIA
                     GAKQLHGKQLSYNNIKDADATLALVKKFDTPAAVAVKHMNPCGVGIGDTIEQAFQHAY
                     EADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEI
                     DMTIDSNEEEFVSVSGGYLVQDKDNYVVPKDEMKVVTEVVPTDEQWEAMLLGWKVVPS
                     VKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVEL
                     AAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH"
     gene            10022..11269
                     /locus_tag="OY092_000404"
     CDS             10022..11269
                     /locus_tag="OY092_000404"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HCX1075378.1"
                     /translation="MNILVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVH
                     TEISESNHQGILDFAKQQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEG
                     SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTI
                     EAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHD
                     EGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKNG
                     PKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGY
                     PDAYEKGHKVSGFDLNENYFVSGLKKQGNTFVTSGGRVILAIGKGDNVQDAQRDAYEK
                     VSQIQSDHLFYRHDIANKALQLK"
     gene            complement(11535..12341)
                     /locus_tag="OY092_000405"
     CDS             complement(11535..12341)
                     /locus_tag="OY092_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HCX1075379.1"
                     /translation="MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYIT
                     ILMLVFLLMFNGTQFKITSIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTES
                     LVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLM
                     ISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRD
                     GPRTYYYNVPFSYKDIIFIIVLIAIITLAYYCSITLPITGIDDVRLGRVG"
     gene            complement(12334..13734)
                     /locus_tag="OY092_000406"
     CDS             complement(12334..13734)
                     /locus_tag="OY092_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075380.1"
                     /translation="MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKST
                     LLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQVP
                     REDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAML
                     DVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQ
                     KYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGL
                     GEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQ
                     FITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLENVKDQHPYELSIGQKRRLSVAT
                     ALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRL
                     KISDGTLLDCDGDTNV"
     gene            complement(13749..14324)
                     /locus_tag="OY092_000407"
     CDS             complement(13749..14324)
                     /locus_tag="OY092_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HCX1075381.1"
                     /translation="MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQL
                     TNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELV
                     FAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVA
                     GVLSYLLVKALDKTGVTKLFRPAAKEDYDNL"
     regulatory      complement(14401..14501)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(14823..14957)
                     /gene="graF"
                     /locus_tag="OY092_000408"
     CDS             complement(14823..14957)
                     /gene="graF"
                     /locus_tag="OY092_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycopeptide resistance-associated protein GraF"
                     /protein_id="HCX1075382.1"
                     /translation="MSNENQNKKAAEKAKEVEEKLKDKKEVKTEDINQTKQDIQDTLN
                     "
     gene            15109..16404
                     /locus_tag="OY092_000409"
     CDS             15109..16404
                     /locus_tag="OY092_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075383.1"
                     /translation="MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVD
                     THVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDY
                     DISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHF
                     MWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRR
                     ALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAK
                     RDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFV
                     YGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLT
                     EFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP"
     gene            16829..18001
                     /locus_tag="OY092_000410"
     CDS             16829..18001
                     /locus_tag="OY092_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HCX1075384.1"
                     /translation="MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDK
                     SQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRL
                     FNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
                     EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHV
                     LNLFSYTGAFSVIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDF
                     YKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLITGALNILSSEGTLLLCTNA
                     SVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH"
     gene            18055..18597
                     /locus_tag="OY092_000411"
     CDS             18055..18597
                     /locus_tag="OY092_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HCX1075385.1"
                     /translation="MGFKNNLTSNLTNKIGNSVFKIENVDGKGAMPTTIQELRERRER
                     AEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVK
                     ERIMSAAAIQGSQFIGKRISSAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYF
                     MNKIGKDHIQKCENVIKNVM"
     gene            18751..19017
                     /locus_tag="OY092_000412"
     CDS             18751..19017
                     /locus_tag="OY092_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HCX1075386.1"
                     /translation="MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNL
                     KSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK"
     gene            19020..20738
                     /gene="ptsP"
                     /locus_tag="OY092_000413"
     CDS             19020..20738
                     /gene="ptsP"
                     /locus_tag="OY092_000413"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCX1075387.1"
                     /translation="MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAK
                     FNNAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANA
                     ASALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVI
                     VGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGD
                     MIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAAN
                     IGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMDGKRVVVR
                     TLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMF
                     PMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDF
                     FSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA
                     GDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIEL
                     VNNYVK"
     gene            complement(20975..21208)
                     /gene="nrdH"
                     /locus_tag="OY092_000414"
     CDS             complement(20975..21208)
                     /gene="nrdH"
                     /locus_tag="OY092_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HCX1075388.1"
                     /translation="MSEIIVYTQNDCPPCTFVKNYLNEHQIDFEERNINNQQYRNEMI
                     DFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD"
     gene            21406..22767
                     /locus_tag="OY092_000415"
     CDS             21406..22767
                     /locus_tag="OY092_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HCX1075389.1"
                     /translation="MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKND
                     LQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAF
                     FFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKN
                     GKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKK
                     ALKISMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDE
                     KTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCF
                     VISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGY
                     MRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGE
                     IEK"
     gene            22764..23783
                     /locus_tag="OY092_000416"
     CDS             22764..23783
                     /locus_tag="OY092_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCX1075390.1"
                     /translation="MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKI
                     NHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSF
                     YAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
                     PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFL
                     SLRIQNSEHFYSAVFDYWWMFAISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFG
                     YGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYV
                     EGKKS"
     gene            23916..24578
                     /locus_tag="OY092_000417"
     CDS             23916..24578
                     /locus_tag="OY092_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HCX1075391.1"
                     /translation="MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDI
                     ATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQN
                     DYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAG
                     KSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIA
                     TR"
     gene            complement(24986..26683)
                     /locus_tag="OY092_000418"
     CDS             complement(24986..26683)
                     /locus_tag="OY092_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HCX1075392.1"
                     /translation="MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPD
                     DNLLGIDYVIPDYTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALG
                     LIRNKLEEHHLLRTAKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVV
                     HTGDFKFDFTPVGKPANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKI
                     FRNCKGRIIFATFASNIYRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPP
                     ETFIEPNKINTVPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPI
                     PGNTKSINRTINSLYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGE
                     YRMLKAHGETGVECGVEEDNVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDI
                     GNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKI
                     KTDVISKLNQNKDIQWHQIKSSIIETLQPYLFEKTARKPMILPVIMKVNEQKESNNK"
     gene            complement(26683..26901)
                     /locus_tag="OY092_000419"
     CDS             complement(26683..26901)
                     /locus_tag="OY092_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HCX1075393.1"
                     /translation="MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFN
                     IEFITKLEGAHLDYEKENSEHFNVEIAK"
     gene            complement(26930..27052)
                     /locus_tag="OY092_000420"
     CDS             complement(26930..27052)
                     /locus_tag="OY092_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075394.1"
                     /translation="MNDMMNLVINQIVIKLNYRDDWNEFIDIYSNTILLGLTIN"
     gene            complement(27383..27934)
                     /locus_tag="OY092_000421"
     CDS             complement(27383..27934)
                     /locus_tag="OY092_000421"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HCX1075395.1"
                     /translation="MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNS
                     QDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQE
                     AYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLN
                     GVMFYDHIDKDHPLQPHTDAVEV"
     gene            28299..28925
                     /locus_tag="OY092_000422"
     CDS             28299..28925
                     /locus_tag="OY092_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkyA family protein"
                     /protein_id="HCX1075396.1"
                     /translation="MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPI
                     KTVGKKIAELDEKKKKLTEDVNSKDTTVRGKAVKDLIKNADDRLKEFEKEEDAIKKSE
                     QDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLN
                     QNDATQQGVNEKSKAIEENYKKLKEVSDKYTKVLNKVGKEKQDVDQFK"
     gene            29096..30208
                     /gene="pdhA"
                     /locus_tag="OY092_000423"
     CDS             29096..30208
                     /gene="pdhA"
                     /locus_tag="OY092_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002467471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HCX1075397.1"
                     /translation="MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLT
                     DEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILP
                     GYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFAL
                     KKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAA
                     ETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMA
                     GDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEA
                     DNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK"
     gene            30212..31189
                     /locus_tag="OY092_000424"
     CDS             30212..31189
                     /locus_tag="OY092_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017637695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HCX1075398.1"
                     /translation="MAQMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGL
                     QKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTR
                     FRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLIS
                     SIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESM
                     KAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAE
                     LSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF"
     gene            31280..32572
                     /locus_tag="OY092_000425"
     CDS             31280..32572
                     /locus_tag="OY092_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HCX1075399.1"
                     /translation="MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKS
                     VVEIPSPVSGTVEEVMVEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKE
                     EAPAEQAPVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDA
                     YLNGGAPTASNESAASTTSEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVN
                     SKHTAPHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALN
                     TSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDG
                     KLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPV
                     LALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG"
     gene            32576..33982
                     /gene="lpdA"
                     /locus_tag="OY092_000426"
     CDS             32576..33982
                     /gene="lpdA"
                     /locus_tag="OY092_000426"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HCX1075400.1"
                     /translation="MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLG
                     GVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGG
                     VEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG
                     KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQ
                     MTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP
                     NTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAE
                     AIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLD
                     DTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLG
                     EMTMEAAEKAIGYPIHTM"
     gene            34150..34425
                     /locus_tag="OY092_000427"
     CDS             34150..34425
                     /locus_tag="OY092_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HCX1075401.1"
                     /translation="MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYK
                     RFKEIVPAKAEEKQIFNTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK"
     gene            34569..35108
                     /locus_tag="OY092_000428"
     CDS             34569..35108
                     /locus_tag="OY092_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1075402.1"
                     /translation="MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSM
                     ETFLNIIEVLGTTPSEFFKDSENEKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDME
                     PLILTLKPGASYKNFNPSESDTFIYCMSGQITLNLGKEVYQAQEEDVLYFKARDNHRL
                     SNESNNETRILIVATASYL"
     gene            35121..36215
                     /locus_tag="OY092_000429"
     CDS             35121..36215
                     /locus_tag="OY092_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075403.1"
                     /translation="MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKT
                     TILKLIAGFEYPDSGEVIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLK
                     LKKLSKTEIDQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDE
                     SLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGT
                     PTDIYDEPVNRFVADFIGESNIVEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIR
                     PEDISLIKAEEGLFKATVDSMLFRGVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYF
                     DPEAIHIMVPGETEEEFDKRIESYEEVDNA"
     gene            36208..37005
                     /locus_tag="OY092_000430"
     CDS             36208..37005
                     /locus_tag="OY092_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075404.1"
                     /translation="MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDINGHFSFTNY
                     QQIFTTKYLKMFAYSILYVALITIITLAISYPAAYYITRSKFQNILLMIMIIPTWINL
                     LLKTYAFIGLLSHDGVINQFFHLFNLPSFNLLFTTGAFLVVASYIYIPFMILPIFNSM
                     KAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGN
                     KVINIGTAIEEQFLTIQNYGMGSTIAIFLIVFMAFILIITKSSNGRG"
     gene            37011..37820
                     /locus_tag="OY092_000431"
     CDS             37011..37820
                     /locus_tag="OY092_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075405.1"
                     /translation="MKWYGKLYIGILLAILYIPIFFLMFYSFNSAGNMIHFEHFTLEH
                     YQSLFQNDHLMSVIFNTIAVALLAASISTVIGTFGAIAIYYLRNKKFKVTLLTLNNVL
                     MVSSDVVIGASFLIMFTTIGHFTGLGLGFWTVLISHIAFCIPIVVIIVLPQLYEMNNN
                     MLNAARDLGATEPQLLSNIIIPNILPSIIGGFFMALTYSLDDFTVSFFVTGNGFSVLS
                     VEVYAMARKGISMEINAISTLLFAVIVLGILGYYLIQYVINKKKLIKRGVK"
     gene            37820..38893
                     /locus_tag="OY092_000432"
     CDS             37820..38893
                     /locus_tag="OY092_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HCX1075406.1"
                     /translation="MKRFLQLIIGSLVVGMLCLTLSHWFKSKEQVHTNQKIYVYNWGE
                     YIDPELIKKFEKETGIQVVYETFDSNEAMEAKIRNGGTHYDVAFPSEYTVQKLKRDHL
                     LLPIDHNKVPNIKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKS
                     LYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG
                     DEITMMLQQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQNKE
                     GAYKFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRFYPTKKEQERLEVY
                     KDLGPEVLSEYNENFLNFKMSLK"
     gene            38967..39986
                     /locus_tag="OY092_000433"
     CDS             38967..39986
                     /locus_tag="OY092_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HCX1075407.1"
                     /translation="MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSF
                     SNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLA
                     LISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQY
                     YEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRA
                     VESEYNHDEHTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREK
                     AEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDISEERNSSEVKD
                     KKEQE"
BASE COUNT        14043 a         5713 c         7506 g        12825 t
ORIGIN      
        1 attcacaatt caaacttttg aaagggtgta caaagtgaaa gtagcagtca ttatgggcag
       61 ttcttccgat tggaaaatta tgcaagagag ttgtaacatg ttggattatt ttgaaattcc
      121 gtacgaaaaa caagtagtat cggcacatcg tacgccaaaa atgatggttc aatttgcttc
      181 tgaagcgaga gaaagcggta tagacattat cattgcaggc gctggcggtg cggcacattt
      241 accaggtatg gttgcatcat taacgacgct accagttatt ggagtgccga ttgaaacaaa
      301 aagtttaaag ggtatagatt ctttattatc aattgttcaa atgccaggag gtattccggt
      361 tgcaacgact gcaattggtg cagcaggtgc taaaaacgca ggtatacttg cagcaagaat
      421 gttaagtatt caaaatcctt ctttagttga aaaactaaat cattatgaat cttcgttaat
      481 tcaaaaagtg gaggacatgc aaaatgaact tcaataaatt aaagtttggt gcgactattg
      541 gcattattgg tggtggtcag cttggaaaga tgatggcaca atcagctcaa aaaatgggtt
      601 ataaagtggc tgtattggat cctgctgaag attgtccatg tagatacgtt gcacacgaat
      661 ttatacaagc caagtatgac gatgaaaagg cactcaatca attaggacaa aaatgtgatg
      721 tgattactta tgaatttgaa aacatttcag cccaacaatt aaaactatta tgtgaaaagt
      781 acaatattcc gcaaggttac caagctatac agttattaca agaccgctta actgaaaaag
      841 aaacattaaa aagtgctggt accaaagttg tcccgttcat ttcagtaaaa gaatctacag
      901 atattgacaa agcaattgaa acattaggat atccttttat tgtaaaaact agatttggtg
      961 gctacgatgg caaaggtcaa gttttaatta acaacgaaaa agacttacaa gaaggtttta
     1021 aattaattga aactagtgaa tgcgtagctg aaaaatattt gaatatcaag aaagaagtat
     1081 cacttactgt tacaagagga aacaacaatc aaattactta tttcccatta caagaaaatg
     1141 agcatagaaa tcaaatactt ttcaaaacaa ttgttccagc gagaatagat aaaacagctg
     1201 aggcgaaaga gcaagttaat aaaattatcc aatcgattca tttcattgga acatttacag
     1261 ttgaattttt tatagatagt aacaaccaat tgtatgtgaa cgagattgca ccaaggcctc
     1321 acaattccgg acattattca attgaagcat gtgattattc acaatttgat actcatattt
     1381 tagcagttac cggacaatca ttaccaaatt caattgaatt attaaagcct gcagtcatga
     1441 tgaacttact aggtaaagac ttagatttat tggaaaatga atttaatgaa catccagagt
     1501 ggcacttaca tatttatggt aagtctgagc gtaaagatag tagaaaaatg gggcatatga
     1561 ctgtactaac gaatgatgta aaccaaactg aacaagatat gtacgctaaa tttgagggga
     1621 gtaattaaag catgacatta ttatatgaag gaaaagcgaa gcgtattttc tcaacaaatc
     1681 aagaaaatga attaagagtt gaatataaag atgaagttac tgctggaaac ggggctaaga
     1741 aagacacaat ggcaggtaag gggcgattaa ataatcaaat tacttctatt atatttaaat
     1801 atttacaaga aaatggaata gaaagtcact ttattaaaca attatctgaa acagatcaat
     1861 tagttaagcc tgtgaaaata attccattag aagtagttgt ccgtaatatt gctagtggat
     1921 ctattacaaa gcgtttaggt tttgaaaatg gtgaagtttt tagagaacca cttgtggaat
     1981 ttttctataa aaatgatgca ttaaatgatc ctttgattac agatgatcac atcaaattac
     2041 tgaatattgc gatagataaa gatattgaaa cattaaaaac gaaagcgcta gaaattaatc
     2101 aagtattaaa acaattaatg gatgcgatga atttaaaatt agtagatttt aaaatcgaat
     2161 ttggaaagac tgagactggt caaattttgt tagcggatga aatatctcca gatacatgtc
     2221 gaatttggga taaagctacc aatgcaaact ttgataaaga tgtatataga aataacactg
     2281 gatcactgat tgaaacatat caaatatttt taaacaaatt ggaggattta aaataatgaa
     2341 aacaattgaa ctacatatca cattacaacc acaagtatta gatacgcaag gacaaacgct
     2401 tactcgagct gtacatgact taggttatgc acaagtgaat gatattcgtg taggaaaagt
     2461 attatatatg acagtggatg aggttagtga tgaaaaggta cacaacatta ttacaactct
     2521 aagtgaaaaa ttgtttgcaa atacagtgat tgaagaatat agctataaag tgttagatga
     2581 tgaaaaggag aatgcataaa atgaaatttg cggttcttgt ttttccaggt tcgaattgtg
     2641 atagagacat gtttaatgct gctattaaaa gtggtgttga agcggaatat gtagattata
     2701 gagaaacatc actaagtgga tttgatggcg tacttattcc tggtggattt tcattcgggg
     2761 attacttaag atctggggca atggctagtg tagcgccgat tatttcggaa gttaaacgtc
     2821 ttgcagctga aggtaagcca gtattaggtg tttgtaatgg gtttcaaatt ttaactgaaa
     2881 taggcttatt acctggtgca ttattgcata acgattcaca tttatttatt agtagaaatg
     2941 aaaagttaga aatagtgaat aatcaaacgg catttacaaa tctttatgaa caaggtgaaa
     3001 aagttatata tcctgtagct cacggtgaag gtcattatta ttgtactgat gaaatatatc
     3061 aacaattaaa agctaacaat caaattattc tgaaatatgc gaataatccg aacggttcat
     3121 atgatgatat tgcaggaatt gttaatgaaa aaggcaatgt atgtggcatg atgccacatc
     3181 ctgaaagagc tttagaaacg ttgttaggta ctgatagtgg tgtgaaatta tttgaagcga
     3241 tggtaaaaag ttggagggaa caacatgtct aaatttatcg aaccaagcgt tgaagaaatt
     3301 aaacttgaaa aagtatatca agatatggga ttaagtgatc aagaatatga aaaagtttgc
     3361 gatattttag gcagacaacc taactttaca gaaacaggta tcttttctgt tatgtggagt
     3421 gaacattgct cttataaaca ttctaaaccg tttttaaagc aatttcctac gtcaggtgag
     3481 catgtgctta tggggcctgg tgaaggtgca ggggtagtcg atataggtga taatcaagcc
     3541 gtagtattta aagtagagtc tcacaatcat ccatcagcaa ttgaaccata tcaaggggct
     3601 gctacaggcg ttggtggaat cattcgtgac attgtctcta ttggggctag acctattaat
     3661 ttgttaaaca gtcttagatt tggagaatta gataataaac aaaaccaaag attacttaaa
     3721 ggtgttgtaa agggtatcgg aggttatggt aactgcattg gtattccaac aactgctggt
     3781 gaaatcgaat ttgatgaacg ttatgatggc aatccacttg ttaatgcaat gtgtgttggt
     3841 gttatcaatc acgacatgat tcaaaaaggc acagcaaaag gtgtaggtaa ttcggtcatt
     3901 tatgttggtt tgaaaactgg tcgagatggt attcatggtg ctacttttgc atctgaagaa
     3961 ttgacggaag aaagcgaaag taaacgacct tctgtacaaa tcggtgatcc atttgtaggt
     4021 aaaaaattaa tggaagcaac acttgaagca attacatttg atgaattagt tggtattcaa
     4081 gatatgggtg ctgctggttt aacatcttca tcgtctgaaa tggcggcaaa aggtggtagt
     4141 gggttacatt tgagattaga acaagtgcca acacgtgagc caggtatttc tccttatgaa
     4201 atgatgcttt cagaaactca agaacgtatg ttactagttg ttgaaaaagg tactgaacaa
     4261 aaattcttag atttatttga taagcacgaa ttggatagtg ctgttatagg tgaagttaca
     4321 gatacaaatc gttttgtttt aacatatgat gacgaagttt atgctgacat tccagttgaa
     4381 ccactagctg atgaagcacc tgtatatatt ttagaaggag aagaaaaaga ttataatact
     4441 tctaaaaatg attatacaca catcgatgtt aaagatactt tctttaaatt acttaagcat
     4501 ccgactatag catctaaaca ctatttatat gatcaatacg accaacaagt tggtgccaat
     4561 acgataatta agccaggact tcaagcatcg gtagtacgtg tggaaggcac aaataaggcg
     4621 attgcttcaa caattgatgg tgaagcgcgt tatgtatata acaatccata tgaaggtgga
     4681 aagatggtag tagctgaagc ttatcgaaat ttaattgccg tgggtgcaac accattagca
     4741 atgacagatt gtttaaatta tggttctcct gaaaagaaag aaatctatca acagttgata
     4801 gattcaacga aaggtatggc agaagcatgc gacattctta agacaccagt agtttctgga
     4861 aatgtatctt tatataacga aacgaaaggt acttctattt tcccaacacc agttgttgga
     4921 atggtaggtt tgattgaaaa tgtaaattat ttaaatgatt ttgaacctca agttggagat
     4981 aaattatatt taatcggtga tactaaggac gactttggtg gtagtcaact tgaaaagtta
     5041 atttatggca aagttaatca tgaatttgag tcattagatt tgagttcaga agttgaaaaa
     5101 ggtgaatcaa tcaagaccgc tattcgtgaa ggactattat cacatgttca aacagttggt
     5161 aaaggtggct tactgattac cttagctaaa ctaagtgcgc attacggttt aggattaaaa
     5221 tcttcaatag atataacaaa tgcacaattg tttagtgaga cacaaggccg atatgttgtt
     5281 tctgttaaat caggtaaaac tttaaatatt gataatgcaa tagaaattgg acttttaaca
     5341 gatagtgata atttcaaagt aacaacacca tatacagaga ttagtgaaaa tgtttcagat
     5401 attaaacaaa tatgggaagg ggcaattgct caatgtttaa ctactcagga ttaaacgaag
     5461 aatgtggcgt gtttggtatt tggaatcatc ctgaagcagc gcaactaaca tatatgggac
     5521 ttcatagttt gcaacatcgt ggtcaagaag gtgcaggtat agttgtttct gatcaaaatg
     5581 aattaaaagg cgagcgagga ttaggcttac taactgaagc gattaaagat gatcaaatgg
     5641 aacgattaaa aggatatcaa catgcaattg gtcacgtccg ttatgctact tcaggtaata
     5701 aaggtattga aaatattcaa ccgtttctgt atcactttta tgatatgagt gtaggtattt
     5761 gtcataatgg taacctcatt aatgctaaat cattgcgtca gaatttagaa aaacaaggtg
     5821 ctatcttcca ttcgtcttct gatactgaag tcattatgca tttgattcga cgcagtaagg
     5881 caccaacttt tgaagaagca ttaaaagaaa gtcttcgaaa aattaaaggt ggttttacat
     5941 ttgcaatttt aacaaaggat gcgttatatg gcgcagtaga tccaaatgct atcagaccac
     6001 ttgttgtagg taaaatgaaa gatgggacat acatccttgc aagtgaaaca tgtgcaatag
     6061 atgtgttagg tgcagaattc gttcaagata ttcatgcagg tgaatatgtc gtgattaacg
     6121 ataaaggtat tacagttaaa tcttatacac atcatacgac aactgcaatt tctgcgatgg
     6181 aatatattta ttttgctaga ccagactcaa caatagctgg taaaaatgtc catgcagtac
     6241 gtaaagcttc tggtaaaaaa ttagcccaag aaagccctgt aaatgctgat atggtcatcg
     6301 gtgtacccaa ttcatcgtta tcagctgcga gtggttatgc tgaagaaata ggtttgccat
     6361 atgaaatggg actagttaaa aatcaatatg ttgcaagaac atttattcaa ccaactcaag
     6421 aattacgtga gcaaggtgtg agagtgaagt tatctgcggt aaaagatata gtagatggga
     6481 aaaatatcat tcttgttgat gattctattg ttcgcggtac gacaattcga cgcattgtga
     6541 aaatgttaaa agattctggt gcaaataaag tgcatgtgcg tatagcatca ccggaattta
     6601 tgttcccaag tttttatgga atcgatgttt caactacggc agaattaatt tctgcaagca
     6661 aatcacctga agaaattaaa gattatattg gcgctgattc attagcatat ctatctgtag
     6721 atgggttaat tgaatcaatt ggtttagatt atgacgcgcc atatagtggc ttatgtgtag
     6781 aaagtttcac tggagattat cctgcagggt tatacgatta tgaagcaaat tataaagcac
     6841 atttaagtca tcgacaaaag caatatattt ctaaaaataa acactttttt gatagtgagg
     6901 gaaatttaaa tgtctaaagc atatgaacaa tctggtgtaa atattcatgc tggttatgaa
     6961 gctgtagaaa gaatgtctag tcatgttaaa cgtacgatgc gtaaagaagt tatcggtggt
     7021 ttaggtggat tcggtgctac atttgattta tcacaattaa atatgacagc accagtttta
     7081 gtttctggaa cagacggagt aggaacgaaa ttaaaactag ctatcgacta tggtaaacat
     7141 gattcgatag gtatcgatgc agtcgcaatg tgtgttaatg atattttaac gacaggtgca
     7201 gaaccattat attttttaga ttacatcgct acaaataaag ttgttcctga agttattgaa
     7261 caaattgtta aaggtattag tgatgcatgt gttgaaacga atactgcact tatcggtgga
     7321 gagactgctg aaatgggtga aatgtatcac gaaggcgaat atgatgtagc cggatttgct
     7381 gttggagcag ttgaaaagga tgactatgta gatggttcag aagtgaaaga gggacaagtt
     7441 gttataggac ttgcgtcaag tggcattcat tcaaatggat atagtttagt gcgcaaatta
     7501 attaatgaat caggcattga tttggcatca aacttcgata atcgtccatt tatagatgtc
     7561 tttttagaac caactaaatt atatgtcaaa cctgtacttg ctttgaaaaa agaagtttct
     7621 attaaggcaa tgaatcatat tactggtgga ggtttttatg aaaatattcc acgtgcattg
     7681 ccagccggat atgctgctag aattgatact acatcatttc caacgccaaa aatatttgat
     7741 tggttacaac aacaaggcaa tatagataca aatgaaatgt ataacatttt taacatgggt
     7801 attggctata cggttatcgt tgatgaaaaa gatgcatcac gcgctttgaa gattttagca
     7861 gaacaaaatg tggaagccta tcaaattgga catattgtga aaaatgagtc aactgcaatt
     7921 gaattgttgg gggtataaca atggttaaaa ttgcgatttt tgcatcaggt tcaggaagta
     7981 actttgaaaa tatagttgag catgttgaat caggaaaact tgaaaatatt gaagttacgg
     8041 cgctatatac ggatcatcaa aatgcgtttt gtatagatag agcaaaaaag cacggtattc
     8101 ctgtttatat taatgaacca aaacaatttg attcaaaagc agcgtatgaa caacatttag
     8161 taacattatt aaataaagat aaggtagagt ggattatttt agctggttac atgcgtctaa
     8221 ttggtccaga tttattagct tcatttgcag gtaaaatatt gaatatacat ccatctctat
     8281 tgccgaaata taaggggatt gacgcaatag gccaagcata tcatagtggc gatactatta
     8341 ctggttcgac agtacattat gttgatagtg gtatggatac gggagaaatt attgaacaga
     8401 gaaaatgtga tattagaccg gacgattcaa aagaacaatt agaagagaaa gtaaaaaaat
     8461 tggaatatga gttatatcca agtgttattg ctaaaattgt aaaataagga gtatgtatgt
     8521 gatgaagaaa gctattttga gcgtatcaaa taaaacaggt attgtagagt ttgctaaagc
     8581 gttaacgcaa ttaaattatg aattatattc aacaggtggt actaaacgta tattagatga
     8641 agcaaatgta ccagttcgtt ctgtttcaga cttaacacat tttccagaaa taatggatgg
     8701 ccgtgttaaa acattacatc cggctgttca tggtggcatt ttagctgatc gaaataaacc
     8761 gcagcattta aatgaattat cagaacaaca tatagattta attgatatgg tagtagttaa
     8821 tttatatcca ttccaacaaa ctgttgcaaa ccctgatgtg acgatggacg aagcaattga
     8881 aaatattgat attggtggtc caacaatgtt acgtgctgca gctaaaaact ataaacatgt
     8941 aacaacaatt gtacatccgg cagattatca tgaagtattg acgcgattaa gaaacgattc
     9001 gttagatgag tcatatagac aatcattaat gattaaagtt tttgagcata ctgcagaata
     9061 tgatgaagcg attgtacgtt tctttaaagg ggataaagaa actttaagat atggagaaaa
     9121 tccacaacaa tcagcgtatt ttgtgagaac ttcgaatgct aagcacacga ttgcaggcgc
     9181 taaacaatta catgggaaac aattaagcta taacaatatt aaagatgcag atgctacact
     9241 agctttagtt aaaaagtttg atacacctgc tgcagttgcg gttaaacaca tgaatccatg
     9301 tggtgttggt atcggtgaca cgatagagca agcatttcaa catgcgtatg aagcggatag
     9361 tcaatcaata tttggtggaa ttgttgcatt aaaccgagct gtaacacctg agttagcaga
     9421 gcaattgcat agtatctttt tggaagtcat tattgcacca aaatttacag atgaagcatt
     9481 agatatttta aaacaaaaga agaatgtaag attattagaa attgatatga ctatagacag
     9541 taacgaagaa gagtttgttt cagtatctgg cggatattta gttcaagata aagataatta
     9601 tgtcgtacca aaagatgaaa tgaaagttgt tacagaagta gtacctacag atgaacaatg
     9661 ggaagcaatg ttattaggat ggaaagttgt accatcagta aaaagtaatg caattatttt
     9721 aagtaataat aaacaaactg taggtatagg tgctggacaa atgaatcgtg tcggtgctgc
     9781 taaaattgcg ttagagagag ctattgaaat caatgatcat gtagcgttag tatctgatgg
     9841 atttttccct atgggagata cagttgaact tgcagcacaa catggtataa aggcaattat
     9901 ccaaccgggt ggttcgatta aagatcaaga ttcaattgat atggctaata aacatggtat
     9961 tgcaatggta gtcacaggca ctcgacattt taaacactaa ttttaaaggg gcgtaacata
    10021 aatgaatata ttagtaattg gtgctggtgg acgagaacat gcacttgcat ataaacttaa
    10081 tcaatcgaat ctagttaaac aagtgtttgt cattccaggt aatgaggcaa tgacacctat
    10141 agctgaagta cacactgaaa tttcagaatc taatcatcaa gggatactag attttgctaa
    10201 acagcaaaat gttgattggg tagttatagg tccagaacag ccgctaattg atggattagc
    10261 agacatttta cgagcgaatg gtttcaaagt gtttggtcca aataagcaag cagctcaaat
    10321 cgaaggctca aaattatttg ctaaaaagat aatggaaaaa tataatattc caactgctga
    10381 ttataaagaa gttgagcgaa aaaaggatgc tttaacatat attgaaaact gtgaattgcc
    10441 cgttgttgtc aagaaagatg ggttagctgc tgggaaaggc gttattattg cagatactat
    10501 tgaagcagcc agaagtgcta ttgagattat gtatggtgat gaagaagaag gtactgttgt
    10561 atttgaaacg tttttagaag gtgaagagtt ctcgctaatg acatttgtta atggtgattt
    10621 agcagttcct ttcgactgta ttgcacaaga tcataaacgc gcatttgatc atgatgaagg
    10681 accaaatact ggtggtatgg gggcttattg tccagtacca catattagtg acgatgtttt
    10741 aaaacttaca aatgaaacaa ttgcacaacc cattgcaaag gcaatgctta atgaaggtta
    10801 tcaattcttc ggtgtattat acattggtgc tattttaact aaaaatggtc caaaagtaat
    10861 agaatttaat gcccgttttg gtgatcctga agctcaagta ttattaagtc gcatggaaag
    10921 tgatttaatg cagcatatta ttgatttaga tgaaggaaaa cgtactgaat tcaaatggaa
    10981 aaatgaatct attgtagggg tcatgttggc atcaaaagga tatcctgatg catatgaaaa
    11041 agggcataaa gtaagtggct ttgatttaaa tgaaaactat tttgttagtg gattaaagaa
    11101 gcaaggtaat acctttgtta cttcaggtgg tagagttata cttgccatcg gaaaaggtga
    11161 caatgtacaa gatgcacagc gagacgcata cgaaaaagta tcacaaatac aaagtgacca
    11221 tttattctat cgtcatgaca ttgcgaataa agcactacaa cttaaataag tatatttaaa
    11281 aaatactaag attagctatg aagaaatcta taacgatagt tttttcatag cttttttagt
    11341 tgtagagtct aggacattga tttctgtacc aaatttgtga ttattcatat gtaatacaaa
    11401 agaggcgcca caacatgttt ggatgaacaa aataacatgt ttgtggcacc tcttttgttt
    11461 agtatggaat aaatggtttt ctttttctat acaatgaatt tctaatttag tatctataca
    11521 attatggata aaatttaacc tacacgacca agacgaacat catctatgcc cgtgatgggt
    11581 aaggtgattg aacaataata tgccaaagta ataatggcaa ttaaaactat aataaagatt
    11641 atatctttat atgagaaagg tacgttgtaa tagtaagtac gaggaccatc tctaaatcct
    11701 ttcgactcca tcgcaactga taattgatgt gcctttctaa tattttggct taatagaggt
    11761 ataattaaat gcttaaatcg ctttaaccct ctataatttg ccgcgtctat catctgatag
    11821 cgcattttta aagatctgcg aagctgtatt aaagaactaa tcattaaagg tatcatacga
    11881 atggcagcca tgaatgcata agcaactttt gatttaacct ttaaatgctg cattaaacta
    11941 taaaatatca tgacaacctg agatgtaagt gcgattaaga taccgaaaaa tgatatagca
    12001 atggttctta atgatacatg taaaccacga actaaacttt ctgttgtaat atggataaat
    12061 ccgaatttca aaattgtatg gctaccattc ccgtataaaa tcatgaatag ggaagagagt
    12121 aatgcaaagc caatacttat agttataaaa attgatgtaa ttttaaactg agtaccatta
    12181 aacatcaata agaaaactaa cattaagata gtgatataaa gcataaaatc gaaattatgc
    12241 acaaatataa taaagaaaaa tagtataatt ccaagaaata gtttcgttat aatgttgaca
    12301 tcatcaacaa atgattgccg aactttccat tgctcataca ttcgtatcac catcacaatc
    12361 tagtaacgta ccatctgaaa ttttaagtct tcttgatgga taacgttcaa ttatttcatc
    12421 gtcatgtgta accatgacaa tactttgtcc caaattaatt cgtttttgga aaagtttgat
    12481 caactggaat gtattatggc tatcaagtcc aaatgtcggt tcatctaaaa agatgatatc
    12541 agctttagaa cttagtgcgg tagctacgct aaggcgtcgt ttttgaccaa tagacaactc
    12601 ataaggatgt tgatctttaa cattttctaa atctaaaagt tttaaaagtt gtatcgtttc
    12661 atcatcactt tgatctttag aaaggtgatt aaaatgaatg ttaatttcat cataaaccga
    12721 atttgttata aattgtaatt ctgggttttg ataaactaga tacatgtgtt ttgctgcatg
    12781 tttaattttt gttaaacgtt gattttcaaa ataaacatca ccttgatatt taatcaattg
    12841 cataattgat tcaagcaagg tagttttacc actgccattt gcccctgtaa ttgtaatcca
    12901 ctcacctaaa ccaatttcta aatctgagaa tgaaagcaac gttgatttac cgcgaataat
    12961 acgtccattt ttaaattgta ataagtgtga gtttgttgtt ggaaagtcaa cacgacttgg
    13021 tgcgaattcc catgcacgtg gatgccacac accgtattca ctgagtaaat gaacatactt
    13081 ctgtaatatg atttcaggac attcatcggc aatgatattt ccgttataat ccatcaaaat
    13141 gacgcggtcg acatgattcc agatgtgttt aactttatgt tcaacgatta caacagtttg
    13201 atcttcccaa agttcaatta gtttagtcca taaatcttcc gttgcttgaa catctaacat
    13261 tgctgtcggt tcatctaaaa acaatgtttt tgattgttga agaatggttt caacaattgc
    13321 caatttctgt ttcatcccgc cacttaaatc tttgatatac gtttcagggg taacatttaa
    13381 attgaccata tttaaagcat tgataattaa cgcatccatg tcttcacgtg gtacttgtct
    13441 attttctaaa acgaatgcaa gttcttcgta tacttttggc atacaaaact ggctatcagg
    13501 gtcttggaaa ataacgccac ttaatgggtc aacgattagt tcatcatatt tcataggtaa
    13561 ttcaattaaa ttaggaacaa taccacttaa tacattcaga agtgtacttt taccgcaacc
    13621 agaaggaccg agtaaaagta ctttttcttt gtcttgaata gtgatattta aatgatcgaa
    13681 aattttacgc tgaccacttg gatattttaa tcgtaaatca cttactttta acactctgaa
    13741 tgctcctctt ataagttgtc gtaatcttct ttagcagctg gtctaaataa ttttgttacg
    13801 cctgtcttat ctaaagcttt tactaaaagg taagatagga cgccggcgac tactgcacca
    13861 ctaattaatc taaatacgat gaataatgtt aagttccaac ctgcaacttc atttaaatac
    13921 ccatagaaat aatctatcgg gaaagctgcg attgctgtac aaaaacctgc taacatagct
    13981 accataactg aacgtgattg atatttaaaa attgcaaaga caagttcaca cgctaaacct
    14041 tgtataaaag cgtaaacgat tgtcggaata tcgaaacgac ccataatgat agtttcgcct
    14101 gcacctgcag caaattcagc cagtaaagca atacctggct ttgggataat tagatagcag
    14161 acaatagctg ccatgaacca aaccccgttt gttaattgtt cgaggtgaag gcctgtagct
    14221 tgcacaccat tgtaaacaaa ccaccataaa ttgtaaataa ctgcgaatac tactgaaata
    14281 agaacggtta ctagtatttc agatagcttt aaaccttttg acatttttac atcctcctaa
    14341 taaaaaaacg cacaaccatc cataggaaag ttatgcgttc acaatatata ttagtaaaac
    14401 atatgtatag taacactttc ctacgctagt tcaagctaga tcaggttcaa agggtttgag
    14461 ggcaagcctc atctcagtat aaaacacccc tagtgtgtgc gatttattta attaattata
    14521 ctgtaagacg tttgtaaact tatgtcaata ggttgtcttc atgaaatttc gtttaattcg
    14581 atttagaatt tataatattg gcattggatt taaattgaag atgtagtagg aatgttagta
    14641 attaaagata taaaaatatg tgacatgtaa taatattgag ctgataaatg aagagggata
    14701 catgtgccga gcgcaagcaa aaaagcccct aacaactaaa gcttgtaagg taggagaggg
    14761 atacatgcgc cgagcacatg caaaaaagcc cctaacaact aaaagttgta aggggctcta
    14821 aattaattta gtgtatcttg gatatcttgt tttgtttgat taatatcttc tgtttttact
    14881 tcttttttat cttttaattt ttcttcaact tctttagctt tttctgctgc ttttttattt
    14941 tgattttcat tagacatgat taattcctcc caaattggat aattatttat atataaatct
    15001 tacccggttg tactttcgtt aaacttttct aagtctatag cactatttat tcatttatct
    15061 aaagacaaca acattagatt aatatataat gattttgagg tgaacataat gtcttttctt
    15121 aggaaacacg ccgaaattat ttttagctat ttaatcggta tcgtttcact cttcactggt
    15181 ctcattattt taattaactt gccattaatt aaacaattaa atggtggtaa aaaagttgat
    15241 acacatgttc ataatgtgtg ggaatttctg aatgcatttt tcagtgaaat tattaaagta
    15301 atgagtcgat ttataggtaa tttccctata gttagtgcaa ttgtgataat tatattcggt
    15361 attttagtta tgttgattgg tcatacatta cttagaacta ttaagtatga ctatgatatt
    15421 tctatctttt tcttagttat cggtatcatg tattttatta ttactcttat attaatgact
    15481 caagtttatg gattctttgc agtgattttc attattccat ttacaattca tataggatat
    15541 atcgtctata aagatgaatt gaatcaggaa aatgtaaaaa atcatttcat gtggataatt
    15601 gtgagttatg gtataagtta cttaattaca caaattgcat tgtatggcag aattgatgct
    15661 aatgaaatag agtcaattga tatcttaagt gtcaatgctt tctttataat tatgtggtta
    15721 cttggtcaaa tggctatttg gaatttcttg ttcttgcgcc gagctttacc tttaacaaag
    15781 caagaattag gtgaagagga gccagaatta tcaagaacaa gtaaagggaa tgtcacgaat
    15841 caaactaaaa ttcacttgaa acaactccaa gataagacta cagaatatgc acgtaagaca
    15901 agaagaagtg tcgatttaga taaaattaga gctaaaagag ataaattcaa aaagaaagtt
    15961 aatgatatta tcgatattca agaagacgat attcctgatt ggatgagaaa accgaaatgg
    16021 gttaaaccaa tgtatgtcga actattttgt ggtgtcgtca tctttttatt cacattttta
    16081 gaatttaata atcgtaatgc attatttgta tatggtgatt ggaaattatc acagacacaa
    16141 tatgttattg aatgggttac attactaatt ctgttattca ttattatcgc atatatcgct
    16201 acaacgttaa ctttccactt gaaaggtaag ttttattatt tacaactatt tatggggagc
    16261 attttattct ttaaattgtt aacggaattt ataaatataa tgattcacgg actactactt
    16321 tcagtgttca ttacgccaac attactatta atgttattgg caatcatcat ttcttattcg
    16381 ttacaattac gagagcgacc ataattaaaa gcattataaa agtactatct attaaacatt
    16441 ttgatgtgta cgctataagt tagatatatc tctaacttac ttagatacat gtcaatgaag
    16501 tttatggata gtactttttt tgtaactaga tttgattgat tcaggtgatg tgaattaagt
    16561 attgaaaatt gtatacaaag ttttagtgca aataaaatag ttgaaaagtt atccatttgt
    16621 aaaatcaaga aaactagtaa atagttgaag cgacttatgg aatttgcgaa acgatatata
    16681 gtatttcctt tgtagaaatt taacatatat cattcgaatt actaatttgt taaaatcaac
    16741 agtaagatta gaagtagatg atattgaaat ttggcaaaca atttaatcta tataaaacta
    16801 caacgaaaca cagaaaggaa gttgtcagat gaaaatagca actctgaaca aaggcaaaga
    16861 aacaaaatat tttaatggat atcctttaat tgaagaagag gatatctatt cacaagatca
    16921 tttaaaagaa ggagatattt ttcaaattgt gactgataaa tcacaatatg ttgcaacggc
    16981 ttatgttggt cgccaacata aaggattagg ttgggttcta acatacgata aagctcaaga
    17041 aatcaacaca gctttctttg tgaaattgtt taatactgca ttagcagaac gtgattatta
    17101 ttttaatata gatggaacaa atgcttttag attatttaat gctgaaggtg atggtgttgg
    17161 gggattaaca atcgacaatt acgatggtca tttgttgatt caatggtact caaaaggtat
    17221 ttataaattt aaatatgcca ttcttgaagc ggttagaaaa gtatttgatt ataaatctat
    17281 ttacgaaaaa gtaagattta aagacagcga atatagtggt ggttttgttg aaggcgatgc
    17341 acctgagttt ccaattgtta tcgaagaaaa cttcacattt tataatgtag accttgaaga
    17401 tggtttgatg acaggtatct ttttagatca aaaagaagtg cgcaagaaat taagggatca
    17461 atatgccaaa gaacgccatg ttttaaactt atttagttat acaggtgctt tttctgtaat
    17521 agcagcaagt gaggcatctt caacaacaag tgtagatttg gctaatcgtt ctcgtagttt
    17581 aactgaagaa aattttggat taaatgctat tgatcctaaa tctcaatata tttatgtcat
    17641 ggacactttt gatttctata aatatgctgc acgacatgga catagttatg acacaatcgt
    17701 gatcgatcca cctagctttg cacgcaacaa aaaacgtaca ttttcagtgc aaaaagatta
    17761 tgacaaatta attactggcg ccttaaatat cttatcgtct gaaggaacat tattattatg
    17821 tacaaacgca agtgtatatc cattaaagca atttaaaaat actattaaaa agacgcttga
    17881 agagagtggc gttgattatg aattaactga agttatggga ttaccaaaag attttaaaac
    17941 acatccacat tataagccat ctaaatattt aaaagctgtt tttgtaaata ttagacatta
    18001 atttgataaa aaggggtata gtatcttatt gagaaaaaga agggtgatga tacaatggga
    18061 ttcaaaaaca atttaacatc aaatttaaca aataaaattg gtaattcagt ttttaaaata
    18121 gaaaatgttg acggaaaagg tgcaatgcca acgacgattc aagaattgag agaaagacgc
    18181 gaacgtgctg aagcaattgt aaagagaaag tctttaatgt catcaacaat gagcgttgtt
    18241 ccaattccgg gtttagattt tggtgttgat ttaaaattaa tgaaagatat tatcgaagat
    18301 gtaaataaaa tatacggatt agatcataag caagttaata gccttgggga tgatgtaaaa
    18361 gaaagaatta tgtctgcagc agcaattcaa ggtagtcaat ttattggtaa aagaatttca
    18421 agtgcatttt taaaaattgt aattagagat gtagcaaaac gaactgcagc taaacaaaca
    18481 aaatggtttc ctgttgtagg acaagctgtg tctgcatcta ttagttacta ttttatgaat
    18541 aaaattggaa aagatcacat tcaaaaatgc gaaaatgtta ttaaaaatgt catgtaggtg
    18601 ctataatagt tttgcaattt gcaaatttta ctgaaaccgg ttttaaacga attgaattta
    18661 aagcatggtt ttggtaaagt taaggtataa aactaagtta gtattgtaat aatattgaag
    18721 attctaacta tacgaaggag aaatgtaatt atggaacaaa attcatatgt aatcatcgac
    18781 gagactggta ttcacgctag accagcaaca atgttagtac aaacagcttc aaaattcgat
    18841 tctgatattc aattagaata taacggtaaa aaggttaact taaaatcaat catgggtgtt
    18901 atgagccttg gtgttggtaa agatgctgaa attacaattt atgctgacgg tagtgatgaa
    18961 tctgacgcca ttcaagcaat cagtgacgtc ttatcaaaag aaggattgac taaataatta
    19021 tgtctaaatt aattaaagga attgctgcat ctgatggtgt tgcaattgct aaagcttatt
    19081 tgttagttga gccagactta acattcgaca aaaatgaaaa agtcactgat gttgaaggag
    19141 aagttgctaa gttcaataac gctatcgaag cttctaaagt tgagttaact aaaattagaa
    19201 ataatgcaga ggttcaattg ggtgctgata aagctgctat ctttgatgca catttattag
    19261 ttttagatga ccctgaatta attcaaccaa ttcaagataa gattaaaaat gaaaacgcta
    19321 atgctgcttc agcattaacg gatgtaacaa cacaatttgt tacaattttt gaatctatgg
    19381 ataacgaata catgaaagaa cgtgcggctg atattcgcga cgtttctaaa cgtgtgttat
    19441 cacatatttt aggtgtagaa ttaccgaatc cgagtatgat tgatgaaagc gttgttattg
    19501 tagggaatga cttaacgcca tctgatactg ctcaattaaa taaagaattc gtacaaggtt
    19561 ttgctacaaa cattggcgga agaacaagtc actctgcaat tatgagtcgt tctttagaaa
    19621 ttccagcaat tgttggtaca aaatcaatta ctcaagaagt taaacaaggc gacatgatta
    19681 tcgtagatgg attaaatggt gatgtaatcg ttaatccaac tgaagatgag ttaatcgctt
    19741 atcaagataa acgtgagcgt tattttgctg acaagaaaga attacaaaaa ctacgtgatg
    19801 ctgatactgt tacagttgat ggtgttcacg cagagcttgc tgcaaatatt ggtacaccta
    19861 atgatttgcc aggtgttatt gaaaatggtg cacaaggtat cggcttatat agaactgagt
    19921 ttttatatat gggtcgtgac caaatgccta cagaagaaga acaatttgaa gcttataaag
    19981 aagtattaga agcaatggac ggtaaacgtg ttgttgtacg tactttagat ataggtggag
    20041 ataaagaatt atcatactta aacttgcctg aagaaatgaa tccattctta ggttaccgtg
    20101 cgattcgttt atgccttgcg caacaagata ttttcagacc acagctacgt gcattattac
    20161 gtgcatcagt ttatggtaag ttaaatatca tgttcccaat ggttgcaaca attaacgaat
    20221 ttagagaagc taaagctata ttattagaag aaaaagaaaa ccttaaaaat gaaggtcatg
    20281 acatttcgga tgatatagaa ttaggaatca tggtagagat acctgcaaca gcagcattag
    20341 ctgatgtttt tgctaaagaa gtagatttct tcagtatcgg tacaaatgat ttaattcaat
    20401 acacattagc tgctgaccgt atgtcagagc gtgtatcata tctgtaccaa ccatataacc
    20461 cttcaatctt acgtttagtt aaacaagtta ttgaagcgtc acataaagaa ggtaaatgga
    20521 caggtatgtg tggtgaaatg gctggagatg aaacagctat tccattattg cttggtttag
    20581 gtttagatga gttctctatg agtgcaacgt ctattctgaa agcaagaaga caaattaatg
    20641 gtttaagtaa aaatgaaatg actgaacttg ctaaccgtgc agtcgactgt gcaacgcaag
    20701 aagaagttat tgaattagtt aacaactacg taaaataatt aattctttcg aaagacagaa
    20761 ttataaataa acccgaagta ttcattgtga gtaattatga atacttcggg ttctttttta
    20821 tgatttatgt taatttcaat ggaatgttgt tgctaactaa ttaaacaact atgtgtcatt
    20881 aacaaaatgt tgttctttaa ttaatgttag ttaatttaaa aatcgatatt taatttatga
    20941 tagctataaa tgatgaagtt gatttagatg aaaattaatc ttggatattt aatactttgt
    21001 tgatttcatc aagatcaaca tggtacattg gattgccatt caacaaaata aacggagttg
    21061 aaaaagcatc aaaatctatc atttcgtttc gatattgttg attgttgata tttctctctt
    21121 caaaatcaat ttgatgctca tttagataat tttttacaaa tgtacaaggt ggacaatcat
    21181 tctgcgtata aacgattatt tctgacatgt atcatgctcc ttcgtgcttt attctaatgt
    21241 aatatacaca attatacatt gaaattcaaa tttgtgaaca cattgtggac tgacataaat
    21301 tatacacaat ttcatagcgc ataatgtttt aaaaatacac attatagcaa ttataattaa
    21361 gttcattgtg ttgtcatcaa aaaaagaaaa aggtgatgtt tttaaatgga tacagttgaa
    21421 atcagtcggt ttttgacagc tatgacttta gcagttcata tcatttttgc aacgattggt
    21481 gttggtatgc ctttaatgtt cgcaattgca gaatttttag gtattcgcaa aaatgatctt
    21541 caatatatag ctatggccaa aagatgggct aaagcttata caattactgt agcagtggga
    21601 gttgttacag gtacaattat aggacttcaa ttatcattga tttggcctac atttatggaa
    21661 atgggtggac acgttattgc acttccatta tttatggaaa catttgcgtt cttctttgaa
    21721 gctattttct taagtatata tttatatact tgggatcgtt ttaaaaataa atggacacat
    21781 ttcttaatta gtataccagt aattattggt ggctctttct cagcattctt cattacttca
    21841 gtgaattcat ttatgaatac gcctgcaggt tttgagttga agaatggaaa gatggtcaat
    21901 gttcaaccta tagaagcgat gtttaaccca tcgtttatag ttcgatcatt tcacgtaatt
    21961 actacagctg gtatgacgat ggcatttgtt attgcatcaa tagcagcttt taaattattg
    22021 cgtaatcgtc aacctaaaga tactgtctac cataagaaag ctttgaaaat atctatgata
    22081 gttggattct tttcaacatt actttctatg ttggcagggg atttatctgc aaaatttttg
    22141 cataaattcc aacctgaaaa attagcagct tatgaatggc atttcgatac atcttcccat
    22201 gccaaattat tattatttgg tgtgttagat gaaaagactc agcaagttaa aggtgcgatt
    22261 gaattacctg gactattgag tttcttagca gataatagtg tcaaaactaa agtgcaaggg
    22321 ttaaatgatt ttccaaaaag tttacatccg cctatgattg tccattattt ctttgattta
    22381 atggtaacga tgggaatttt atgttttgtc atttcaggtg tttatgtctt aactttaatg
    22441 tttaaaaagc ttagaaagtt ttctactcat aaatggatgc tttacggaat attattaacc
    22501 ggaccagctt caatgctagc tatagaattt ggatggttct taacagagat gggtagacag
    22561 ccttggattg ttcgtggtta tatgcgcgtg gcagaagcag caacacaagc aggcggaata
    22621 accttcgtta caattttatt tggcatattg tacatcattt taatgtatac atgtgcatac
    22681 gtattaattc gtatgtttaa aaataaaccg gcgtatgaag atgtaaatcg cttagccaag
    22741 aagcaaggag gagaaataga aaaatgattt atgcatttat aggtataaca gtgttatggt
    22801 tgtttttatt ttgctatatc attattgctt ctatagattt tggggcaggt ttcttcgcat
    22861 tgcattcaaa gttaactggt gatgaaaaga aaattaatca cttaatttca cgttatttga
    22921 acccagtttg ggaagttacg aatgtattct ttgttttctt cttcgtagga ttcgtaggtt
    22981 tctttccaga gtcaatcaaa tatttaggca cggtattgtt aataccaggt tcgatagcac
    23041 tgattatgat atcgttgaga aacagttttt atgcatttga aaattatggt caagatacaa
    23101 aattagcatg gatgatcatg tatggggtaa gtggattatt aattccagct tcattatcta
    23161 ctgctttaac tattacagaa ggtggctata ttaatgttcg aaacaatgtt atcgatctag
    23221 attgggtgca gttactatta agcccatttg cttggtctgt agtattcttg gcaattattt
    23281 cagttttata tatttcatca ggatttttga catattatgc taaaaaagca aatgacgaac
    23341 cagcatataa tttaacaaga caatggcaca tatttttagg gccgccgatg attatcattt
    23401 gtttattcgt atttctatca ttacgcattc aaaattctga acatttttat tcagctgttt
    23461 ttgactactg gtggatgttt gctataagtt tcttattctt tgcattagct tcattgttaa
    23521 cattctttaa gaaaaaacat ggtttggctt ttgtatttgt tattttacaa atgatgttcg
    23581 cgttctttgg ctatggaatt agtaaattgc cttacctttt atatccgttt gtaaaaatta
    23641 cagatgcata tgttaatcca gaaatgggct ggacattagt gattgtcttt attttaggtt
    23701 tacttttatt acttccatcg ttaatattat tattaagatt atttgttttc gacaaagaat
    23761 atgttgaagg aaagaaatca taagttgaga cgatacccca actttcattt acttgcatta
    23821 ctgcatttag ataatttagt tggggtgctc atttataata attttaaatt tatattttca
    23881 atgaattgat gaaaatcatt ttatggaggg cgagtatggg taaagaatat gtagtcatcg
    23941 gtctaggtcg ttttggaggt agtatcgttc gtgagttgaa tgcattagac atggatgtaa
    24001 tggccatcga ccatgatgaa aatagagtga atgaatatag tgatatcgct actcatgcgg
    24061 ttgttgcaga cacaacagat gaagcagtta tgaaaagttt aggtatccgt aactttgatc
    24121 atgtcattgt ggcaattggt gaaaatattc aatcaagtac gttgacgact ttaattttaa
    24181 aagagttagg tgtaaaaaaa gtaactgcta aagcacaaaa tgattatcat gcaaagattt
    24241 taaataaaat tggagcagat actgttgtgc accctgagcg tgatatgggt agacgtattg
    24301 cgcataatgt tgcgagtgca agtgtacttg attatcttga gttggcagac gagcattcta
    24361 ttgtagaatt gaaagcaact gaaaagatgg cggggaagtc tatcattgat ttagatataa
    24421 gagcacaata tggaattaac attattgcaa ttaaacgagg caaagagttc atcatttcac
    24481 caaatccaaa tattaattta gaaataggtg atattttaat tatgattgga catgataatg
    24541 atttaaatcg ctttgaaaaa aatattgcga cgagataatc gggagtggga cagaaatgat
    24601 attttctcaa aatttatttc gtcgtcccac cccaacttac attgtctgta gaaattggga
    24661 atccaatttc tctttgttgg ggcccacacc ccaactcgca ttgcctgtag aatttctttt
    24721 cgaaattctc tatgttgggg cccatcccca acttgcacat tattgtaagc tgacttttcg
    24781 tcagcttctt tgttggggcc cctgactaga attgaaaaaa gcttgttaca aagtgcattt
    24841 tcgttcagtc aactactgcc aatataactt tgtagagcat tgaacattga tttatgtctc
    24901 aagctcatca tatataaaga aaaagctact aacaatgtgt ggtgagttta attaaaactt
    24961 cacttcaaag ttagtagctt tttgattatt tattgtttga ttctttttgc tcgtttacct
    25021 tcataatgac tggtaaaatc attggttttc tagccgtttt ttcaaataaa taaggttgta
    25081 atgtttcaat gatagaagat ttaatctgat gccattgaat atctttattt tgatttaact
    25141 tactaataac gtcagttttg attttgcgtt gtgcatcata aattaattga cctgattctc
    25201 tcatatatac aaatcctcga gaaataatgt ctggaccaga aagtaattta tttgtattaa
    25261 aatcaatact aacaacaacg ataactaaac cttcctcaga taatagctta cggtctctta
    25321 ttacaacatt accgatatca ccgataccac taccatcaac aagtacatta ccagatggaa
    25381 tgcgaccagc tttacgtgct gaatcgtgtg ttaaagctaa gacatctcca atatcaaaga
    25441 tgaagacatt atcttcttca acgccgcatt caacaccagt ctcaccatgt gcttttaaca
    25501 tacggtattc accatgaata ggtaagaaat atttcggctt gattaatcga agcattaatt
    25561 gttgatcacc ttgagaacca tgccctgaag tatggatgtt agaaatcttg ctgtggataa
    25621 catctgcacc agctttatac aaggaattaa tcgttctgtt aatacttttt gtattacctg
    25681 ggataggtga tgaactaaat acaacggtat cttcaggtat aattttaatt tgcttatgag
    25741 taccattagc aattctagat aatgctgcca ttggttcacc ttgagaacca gtacatagta
    25801 tcaataactc atgcttcggt acggtattaa ttttattagg ttcaataaat gtttcaggtg
    25861 gtgctttaat ataaccaagt tccataccga ttttaatatt gttttccatc gaacgaccga
    25921 acgtaacaat tttacggtta tttttgatag cagcttcaac tgcttgttga actcggtaaa
    25981 tattagaagc gaaggtagca aatataatac gacctttaca attacggaag atcttatcta
    26041 cgttttgacc aacttcacgt tcgcttaaag taaaatcagg cacaagtgaa tttgttgagt
    26101 ctgaaagtaa acatagaacg ccttcttcgc ctaattgagc cattttagca atgtttgctg
    26161 gtttgcctac aggtgtaaaa tcaaatttaa agtcaccggt atgaactact tttccttcag
    26221 gtgtatctac gatgacgcca taagtttcag gaatactatg cgtagttaag tagaaagaaa
    26281 tcgtaaagtg cttagattta atcacactgt cctcattgat ttcatttagt ttagcagtac
    26341 gtaataaatg atgttcttca agtttattac ggattaaacc taatgctaaa ggaccaccat
    26401 aaataggtat attaagttgt tttaatagga agggcacacc gcctatatgg tcttcgtgac
    26461 catgtgttat aaataggcca acaattttat cttggttttg aactagatat gtgtagtcag
    26521 gtataacata atcaatccct aataagttat catcagggaa tttgatacct gcatcgataa
    26581 tgacaatttc gtctttatac tcaactgcat aagtattttt accgatttca cctagacctc
    26641 caagtgcata tacacctact tcatttggat gtaattgttt cattatttag caatctccac
    26701 attaaagtgt tctgagtttt ctttttcgta atctaaatgt gcgccctcta atttagtgat
    26761 aaattcgata ttaaaattac gatctttcaa gtaacgacgt acttgttctt ctgtttgagc
    26821 ttcaacataa agtgattgtg tattttcacg cacaattacc tcgtctctgt tatgttgata
    26881 aaaaacttta aatactgcca tgttaaaaat tcctcctaag aatgtttgtt taatttattg
    26941 ttaaccctag taaaatcgta ttggagtata tatcgataaa ttcattccaa tcatctctat
    27001 aatttaactt aataacgatt tggttaataa ctaggttcat catgtcgttc attttaaaaa
    27061 attagtgaaa taacactaaa atttcagtta aatcttattt tacatgatga atgataataa
    27121 ataaagcagt ttatctcact agaaatctaa gtatttcgaa taaatgtgca gttctatttc
    27181 ttaaaataaa tgtagagatt aaaaattaat gttaagaaag aattaaagga ttttatatga
    27241 aacggtaaaa tttaaatgag gggataaaaa gtttggtaga aaggtgaata tatttaactg
    27301 ttgtttattc gaaaaagttg tacaagaaaa agcttaggac atcatattta tcctaagctt
    27361 tgataattag taaaaatgtg ctttaaactt ctacagcatc tgtatgtggt tgtaatgggt
    27421 gatctttgtc aatgtgatca tagaacatta caccatttaa atggtcaatt tcatgttgga
    27481 aaacaattgc tggatatcct tttagacgta attgtatatc attaccttcg atgtctttgg
    27541 ctttaattgt aattctatta tgacggtgaa ctagaccagc aacattatca tcgacactaa
    27601 ggcaaccttc accagttggt aaataagctt cttgaacgct atgacttaca atttttgggt
    27661 tcacaagcat atagtcataa gatttgccac tgccatcatc tggtattaaa acagcaatca
    27721 tacgtttaga aatattaatt tgaggtgcag ccaaaccaac gcctgaacgt aaaccatatc
    27781 gtttcgcgat ttcctcatct tgactattta ctaaaaactc tctcatggcg attaatgttt
    27841 ctttttcttc tttagttaat ggtaattcta actcagctgc tttttgacgc aaagttggat
    27901 gaccatctct aatgatgtct ttcattgtta acatatattg caccttcctt attttaattt
    27961 gttttagttg aatgacagta aaaaggttgt taagatactc atacattttt atgtgtaaat
    28021 atctacaaag ttaaccaact actgccaatg tttattttag atagtatatg taaattttca
    28081 gatatgctaa ttgcttaaaa aatgattaaa atgttgattt caagcaatga tactttagaa
    28141 atttatttat catcttgact ttaaaaatta tattataaat gacgtaactg tcaacagata
    28201 tacttagtaa tgaagatgtg taatgtaatt gtttaaaatt gatttccaag cagattttat
    28261 ttatcattta atttaaatag caaatggagg tacaagtaat gaaatttgga aaaacaatcg
    28321 cagtagtatt agcatctagt gtcttgcttg caggatgtac tacggataaa aaagaaatta
    28381 aggcatattt aaagcaagtg gataaaatta aagacgatga agaaccaatt aaaactgttg
    28441 gtaagaaaat tgctgaatta gatgagaaaa agaaaaaatt aactgaagat gtcaatagta
    28501 aagatacaac agttcgcggt aaagcagtaa aagatttaat taaaaatgct gatgatcgtc
    28561 taaaggaatt tgaaaaagaa gaagacgcaa ttaagaagtc tgaacaagac tttaagaaag
    28621 caaaaagtca cgttgataac attgataatg atgttaaacg taaagaagta aaacaattag
    28681 atgatgtatt aaaagaaaaa tataagttac acagtgatta cgcgaaagca tataaaaagg
    28741 ctgtaaactc agagaaaaca ttatttaaat atttaaatca aaatgacgcg acacaacaag
    28801 gtgttaacga aaaatcaaaa gcaatagaag agaactataa aaagttaaaa gaagtatcag
    28861 ataagtatac gaaagtacta aataaggttg gtaaagaaaa gcaagacgtt gatcaattta
    28921 aataattaat ataatacaga tggtaggaaa caactaatac agttcctatt atctgtatct
    28981 ttttttatta aaacagaact ttttcaaatg gtttaacagt cccatttatt tgtggtacaa
    29041 ttagtaagga taaaatgaat ttctatacaa ttatgggaaa ggtatggtga attgaatggc
    29101 tcctaagtta caagcccaat tcgatgcagt aaaagtttta aatgatactc aatcgaaatt
    29161 tgaaatggtt caaattttgg atgagaatgg taacgtcgta aatgaagact tagtacctga
    29221 tcttacggat gaacaattag tagaattaat ggaaagaatg gtatggactc gtatccttga
    29281 tcaacgttct atctcattaa acagacaagg acgtttaggt ttctatgcac caactgctgg
    29341 tcaagaagca tcacaattag cgtcacaata cgctttagaa aaagaagatt acattttacc
    29401 gggatacaga gatgttcctc aaattatttg gcatggttta ccattaactg aagctttctt
    29461 attctcaaga ggtcacttca aaggaaatca attccctgaa ggcgttaatg ctttgagccc
    29521 acaaattatt atcggtgcac aatacattca agctgctggt gttgcatttg cacttaaaaa
    29581 acgtggtaaa aatgcagttg caatcactta cactggtgac ggtggttctt cacaaggtga
    29641 tttctacgaa ggtattaact ttgcagcagc ttataaagca cctgcaattt tcgttattca
    29701 aaacaataac tatgcaattt caacaccaag aagcaagcaa actgctgctg aaacattagc
    29761 tcaaaaagca attgctgtag gtattcctgg tatccaagtt gatggtatgg atgcgttagc
    29821 tgtatatcaa gcaactaaag aagcacgtga ccgcgcagtt gcaggtgaag gtccaacatt
    29881 aattgaaact atgacatatc gttatggtcc tcatacaatg gctggtgacg atccaactcg
    29941 ttacagaact tcagacgaag atgctgaatg ggagaaaaaa gacccattag tacgtttccg
    30001 taaattcctt gaaaacaaag gtttatggaa tgaagacaaa gaaaatgaag ttattgaacg
    30061 tgcaaaagct gatattaaag cagcaattaa agaggctgat aacactgaaa aacaaactgt
    30121 tacttctcta atggaaatta tgtatgaaga tatgcctcaa aacttagcag aacaatatga
    30181 aatttacaaa gagaaggagt cgaagtaagc catggcacaa atgacaatgg ttcaagcgat
    30241 taatgatgcg cttaaaactg aacttaaaaa tgaccaagat gttttaattt ttggtgaaga
    30301 cgttggtgtt aacggcggtg ttttccgtgt tactgaagga ctacaaaaag aatttggtga
    30361 agatagagta ttcgatacac ctttagctga atcaggtatt ggtggtttag caatgggtct
    30421 tgcagttgaa ggattccgtc cggttatgga agtacaattc ttaggtttcg tattcgaagt
    30481 atttgatgcg attgctggac aaattgcacg tactcgtttc cgttcaggcg gtactaaaac
    30541 tgcacctgta acaattcgta gcccatttgg tggtggcgta cacacacctg aattgcacgc
    30601 agataactta gaaggtattt tagctcaatc tccaggtcta aaggttgtta ttccttcagg
    30661 cccatacgat gcgaaaggtt tattaatttc ttctattaga agtaatgacc cagtcgtata
    30721 cttagagcat atgaaattgt atcgttcatt ccgtgaagaa gtacctgaag aagaatatac
    30781 aattgacatt ggtaaggcta atgtgaaaaa agaaggtaat gacatttcaa tcatcacata
    30841 cggtgcaatg gttcaagaat caatgaaagc tgcagaagaa cttgaaaaag atggttattc
    30901 tgttgaagta attgacttac gtactgttca accaatcgat gttgacacaa ttgtagcttc
    30961 agttgaaaaa actggtcgtg cagttgtagt tcaagaagca caacgtcaag ctggtgttgg
    31021 tgcagcagtt gtagctgaat taagtgaacg tgcaatcctt tcattagaag cacctattgg
    31081 aagagttgca gcagcagata caatttatcc attcactcaa gctgaaaatg tttggttacc
    31141 aaacaaaaat gacatcatcg aaaaagcaaa agaaacttta gaattttaat acattttaaa
    31201 agttaacgaa gttagcgtat tttagtctca ttgattaaaa tgaaatgttt aatttacgaa
    31261 atcttaggag ggcaaaaacg tggcatttga atttagatta cccgatatcg gggaaggtat
    31321 ccacgaaggt gaaattgtaa aatggtttgt taaagctgga gatactattg aagaagacga
    31381 tgttttagct gaggtacaaa acgataaatc agtagtagaa atcccatcac cagtatctgg
    31441 tactgttgaa gaagttatgg tagaagaagg tacagtagct gtagttggtg acgttattgt
    31501 taaaatcgat gcacctgatg cagaagatat gcaatttaaa ggtcatgatg atgattcatc
    31561 atctaaagaa gaacctgcga aagaggaagc gccagcagag caagcacctg tagctactca
    31621 aactgaagaa gtagatgaaa acagaactgt taaagcaatg ccttcagtac gtaaatacgc
    31681 acgtgaaaaa ggtgttaaca ttaaagcagt ttcaggatct ggtaaaaatg gtcgtattac
    31741 aaaagaagat gtagatgcat acttaaatgg tggtgcacca acagcttcaa atgaatcagc
    31801 tgcttcaact acaagtgaag aagttgctga aactcctgca gcacctgcag cagtatcatt
    31861 agaaggcgac ttcccagaaa caactgaaaa aatccctgct atgcgtagag caattgcgaa
    31921 agcaatggtt aactctaagc atactgcacc tcatgtaaca ttaatggatg aaattgatgt
    31981 tcaagcatta tgggatcacc gtaagaaatt taaagaaatc gcagctgaac aaggtactaa
    32041 gttaacattc ttaccatatg ttgttaaagc gcttgtttct gcattgaaaa aatacccagc
    32101 acttaatact tcattcaatg aagaagctgg tgaaattgtg cataaacatt actggaatat
    32161 cggtattgcg gcggacactg atagaggttt attagtacct gtagtgaaac atgctgaccg
    32221 taaatctatt ttccaaattt ctgatgaaat taatgaatta gctgttaaag cacgtgatgg
    32281 taaattaaca gccgatgaaa tgaaaggtgc aacatgcaca atcagtaata tcggttcagc
    32341 tggtggacaa tggttcactc cagttatcaa tcacccagaa gtagcaatct taggaattgg
    32401 ccgtattgct caaaaaccta tcgttaaaga tggagaaatt gttgcagcac cagtattagc
    32461 attatcatta agctttgacc acagacaaat tgatggtgca actggccaaa atgcaatgaa
    32521 tcacattaaa cgtttattaa ataatccaga attattatta atggaggggt aaaacatggt
    32581 agttggagat ttcccaattg aaacagatac tatagtaatc ggagcaggtc ctggtggata
    32641 cgttgcagca attcgtgcag ctcaattagg acaaaaagta acaatcgttg agaaaggtaa
    32701 tcttggtggt gtttgcttaa acgtaggatg tattccttca aaagcattac tacatgcttc
    32761 tcaccgtttt gttgaagcac aacattctga aaacttaggt gttattgctg aaagtgtttc
    32821 tttaaacttc caaaaagttc aagaattcaa atcatcagtt gttaataaat taactggtgg
    32881 tgttgaaggc ttacttaaag gtaacaaagt aaacatcgtt aaaggtgaag catatttcgt
    32941 agataacaat agcttacgtg ttatggacga aaagagcgca caaacataca actttaaaaa
    33001 tgcaatcatt gcaacaggtt caagaccaat tgaaattcct aatttcaaat tcggtaaacg
    33061 tgttatcgac tcaacaggtg ctttaaactt acaagaagta ccaggtaaat tagttgtagt
    33121 tggtggagga tacattggat cagaattagg tacagcattt gctaactttg gttcagaagt
    33181 aacaatcctt gaaggtgcta aagatatctt aggtggcttc gaaaaacaaa tgacacaacc
    33241 tgttaaaaaa ggtatgaaag aaaaaggtgt tgaaatcgtt actgaagcta tggctaaatc
    33301 tgctgaagaa acagataacg gagttaaagt tacttatgaa gctaaaggcg aagagaaaac
    33361 aatcgaagct gattatgtat tagtaactgt aggtcgtcgt ccaaacacag acgaattagg
    33421 cctagaagaa ttaggtgtta aattcgctga ccgtggatta ttagaagttg ataaacaaag
    33481 ccgtacgtct atcagcaata tctatgcaat tggtgatatc gttccaggtt taccacttgc
    33541 tcacaaagct agctatgaag ctaaagttgc tgctgaagca attgatggtc aagctgctga
    33601 agttgattac attggtatgc cagcagtatg ctttactgaa ccagaattag ctacagttgg
    33661 ttattcagaa gcgcaagcta aagaagaagg tttagcaatt aaagcttcta aattcccata
    33721 tgcagcaaat ggtcgtgcat tatcattaga tgatactaac ggatttgtta aacttattac
    33781 acttaaagaa gatgatactt taatcggtgc tcaagtagtt ggtactggtg catcagatat
    33841 tatctctgaa ttaggtttag caattgaagc tggtatgaat gctgaagata tcgcattaac
    33901 aatccatgca catccaacat taggtgagat gactatggaa gcagcagaaa aagctatcgg
    33961 atacccaatc catacaatgt aataactgat tatctataaa gattcagtca ttaaaagctg
    34021 tagcatatgc tacggctttt ttgttttagg taaagtaatg taaggaaatt gatttgagat
    34081 atcgttaaca tgtgacatgc atgttatact agcgatgcta acaaaagaat tgaaatggag
    34141 ggttcaacaa tggaatatga gtatccaatt gatttagact ggagtaatga agagatgatt
    34201 tcagtgataa atttctttaa tcatgtagag aagtattatg aatccggcgt gacggcaggc
    34261 gactttatgg gtgcatataa aagatttaaa gaaattgtgc ctgctaaagc agaggaaaaa
    34321 caaattttta atactttcga aaaaagtagt ggctataata gttacaaagc agttcaagat
    34381 gtaaaaactc actctgaaga acaaagagta acagctaaaa aataattcgt tcgaaattaa
    34441 cacaatttaa taggaatttt tctttaaaac tattgctaat aaagctatat tttgatacct
    34501 ttatcaagtg ttaaacaaaa tgtttgataa aagtaaactt aatatagctt ttttaggtgg
    34561 aaaaataaat gaacataggt aataaaatta aaaatcttag aagaattaaa aatttaacgc
    34621 aagaagaact tgctgaacgt acagacttat cgaaaggcta catttcacaa atagaaagtg
    34681 aacatgcctc accaagtatg gaaactttct taaatattat agaggtgtta ggaacgacgc
    34741 caagtgaatt ttttaaagac agtgaaaatg aaaaagtatt atacaagaag gaagaacaag
    34801 ttatttatga tgagtatgat gaaggttata tattaaattg gttagtttca aagtcaaatg
    34861 aatatgatat ggagccatta atattaactt taaagcctgg cgcatcatat aaaaatttta
    34921 atccatcaga gtctgatacg tttatttatt gtatgtcagg tcagataaca cttaatttag
    34981 gcaaagaggt atatcaagca caagaagaag acgttttgta ttttaaagca cgagataatc
    35041 atcgtttgtc aaatgaatca aacaatgaaa cacgaatact tattgtagcg acagcttcat
    35101 atttataggg gggatcttat ttggaaccgt tattatcatt aaaatcagtt agtaaaagct
    35161 atgatgatct taatatctta gatgacatag atattgatat tgaatcagga tacttttata
    35221 cattattagg tccttcaggt tgtggtaaaa caacaatttt aaaattaatt gcagggtttg
    35281 aatatcctga cagtggtgaa gtgatttatc aaaacaaacc aattggtaat ttaccaccaa
    35341 ataaacgtaa agtgaataca gtctttcaag attatgcatt atttccacac ttaaacgtct
    35401 atgataatat cgctttcggt ttgaaattaa aaaaattatc aaaaaccgaa attgatcaaa
    35461 aagtaactga ggcattaaaa ttagttaagc tttcaggtta tgaaaaaaga aatattaatg
    35521 aaatgagtgg cggacaaaag caacgtgttg caattgcacg tgctatcgta aatgaaccag
    35581 aaatattatt attagatgaa tctttatccg cattagattt gaaattgcgc actgaaatgc
    35641 aatatgaatt acgggaattg caatctagat taggtattac atttatattt gtaacacatg
    35701 atcaagaaga agcgttagca ctaagtgact ttctttttgt attaaaagat gggaaaattc
    35761 aacaatttgg tacgccaacg gatatatatg acgaaccagt gaatcgattt gtagctgatt
    35821 ttattggaga atctaatatt gttgaaggac gcatggttag agattatgtc gtgaatattt
    35881 atgggcaaga tttcgaatgt gtcgatatgg gtattcctga aaataaaaaa gtagaagtcg
    35941 ttattcgacc agaagatata tcattaatca aagctgaaga aggattattt aaagcaactg
    36001 ttgattctat gttatttaga ggggtccact atgaaatatg ttgtatagac aataaaggtt
    36061 atgaatgggt aatacaaacg actaaaaaag ctgaagtagg cagtgaagtt ggtctttatt
    36121 ttgatcctga agccattcat attatggttc ctggagaaac agaagaagag tttgataaac
    36181 gtattgaaag ctatgaggaa gtagacaatg cgtaatacta ataaatttct cttaatcccg
    36241 tatttattat ggatggttat atttattatt gtaccagttg tattactcat ttatttttca
    36301 tttttagata tcaatggaca ttttagtttc acgaattatc aacaaatttt tactacaaaa
    36361 tatttaaaaa tgtttgcata ttcaatttta tatgtcgctt taataacaat tattacgttg
    36421 gctataagtt atccagctgc ctattatatt actcgttcga aatttcaaaa tatcttatta
    36481 atgataatga ttattccaac atggataaat ttattgttaa agacatatgc ttttataggt
    36541 ttattaagtc atgatggcgt gattaatcaa tttttccact tatttaattt accatcattc
    36601 aatttgttat ttacaactgg tgcgttttta gtagtggcaa gttacattta tataccattt
    36661 atgattttac ctatatttaa tagcatgaaa gcaattccta ataatttatt gcaggcctca
    36721 agtgatttag gtgctagtcc tttttatact tttagaaaag taatcatgcc gttaacaaaa
    36781 gaaggtgtta tgactgggat tcaagtaacc tttattccat cactttcatt atttatgatt
    36841 acaagattaa ttgcaggtaa taaagtcata aatataggta cggcaataga ggaacaattt
    36901 ttaacaattc aaaattatgg tatgggatca actatagcta tattcttaat tgtatttatg
    36961 gcattcattt taatcattac aaaatcatct aatgggagag ggtgaatcat atgaaatggt
    37021 atggaaagct gtatatcggg atacttttag cgattttata catcccaata ttctttttaa
    37081 tgttctattc attcaattcg gctggtaata tgattcactt tgaacatttt acattagagc
    37141 attatcaatc attatttcaa aatgatcatt taatgtcggt catttttaat acgatagctg
    37201 tagcactttt agcagcctca atttctacag ttattggtac atttggtgcc attgctattt
    37261 attatttaag aaataaaaag tttaaagtaa ctttactaac attgaataat gtcttgatgg
    37321 tatcatccga cgttgtcata ggtgcatcat tcttaattat gtttacaacg attggccatt
    37381 ttactggtct tggtttagga ttttggacag ttctaatatc tcatattgca ttttgcatac
    37441 ctatagttgt gattatcgtc ttaccacaac tgtatgaaat gaataataat atgttaaatg
    37501 ctgcaagaga tttaggagcg actgaaccac aattattaag caacattatt attcctaata
    37561 ttttaccttc tattatagga ggtttcttta tggctttaac ttattcacta gacgatttca
    37621 cagtaagttt cttcgttact ggtaatggct ttagtgtgtt atcagttgaa gtttatgcta
    37681 tggcgagaaa aggaattagt atggaaatta atgcgatttc aacattattg tttgctgtta
    37741 ttgtattagg aatactagga tattatttga ttcaatacgt gattaataag aaaaaactaa
    37801 tcaagcgagg tgtaaaataa tgaaacgttt tttacaactc attataggtt cattagttgt
    37861 gggtatgctt tgtcttactt taagtcattg gtttaaatct aaagaacaag tgcatacaaa
    37921 tcaaaaaatt tacgtataca attggggcga atatattgat ccagagttaa ttaagaaatt
    37981 tgaaaaagaa actggcattc aagtcgttta tgaaactttc gattcaaatg aagcgatgga
    38041 agccaaaatt cgtaatggcg gtacacatta tgatgttgct tttcctagtg aatatacagt
    38101 tcaaaaattg aaaagagatc atttattgtt accaatagat cataataagg tacctaatat
    38161 taaaaattta gattcagatt atatgaatat gtcatttgat aaaggcaata aatattcttt
    38221 accttatttc tttggaactg taggtatttt atataataaa gaaaagtatc caaatgaatc
    38281 atttgatagt tggaagtcat tgtataatcc taaatttaaa aaccaaattt tactagttga
    38341 cggtgctaga gagattatag gcatgagttt gaataaactt gggtataatc ttaatgaccg
    38401 taattcgcac catttaaaag aagcagagcg agatttaacc aaactagcac cacaagtaag
    38461 aggtgtcgta ggtgatgaaa ttaccatgat gcttcaacaa aatgaaggta acatagcggt
    38521 tgtttggagt ggtgttgcag cacctctagt gcaagaaggg gataaatata attatgttat
    38581 tcctaaagaa ggatcgaatt tatggttcga caatatggta attccaaaaa cggcacaaaa
    38641 taaagagggt gcatataaat ttatgaattt tttattagat gctaaaaata acaagcaaaa
    38701 tacagaattc gtaggctatg caacgccaaa caaggctgct cgacaattgt tgcctaaaga
    38761 gattaaagac gaccatcgtt tctatccgac taagaaagag caagaacgcc ttgaagttta
    38821 taaagattta ggacctgaag ttttaagtga atacaatgaa aactttttga atttcaaaat
    38881 gtcattaaaa taaaatcata aatagtagtt atttactgta tatttagtta taataacggg
    38941 ataagtacta taaggagttg taacgaatga ctggagaaca atttactcaa attaaacgtc
    39001 cagtaagtag attaactgaa aaagttctag gttggttatg ttgggtgatg ttattagtgc
    39061 ttactgtcat tacgatgttt atagcacttg tttcattcag taataacaca tcgattgcta
    39121 atcttgaaaa tacattaaac aataatgcat ttatccagca attattagct ggaaatggct
    39181 ataatacaac acaatttgta atatggttac aaaatggtat atgggctatt atcgtttact
    39241 ttattgtttg tttgttgatt tcatttttag ctctcatatc tatgaatata agaatcttgt
    39301 caggtttctt attcttaata tcagcaattg taacgattcc tttagtttta cttatcgtta
    39361 ctttaatcat tccgatatta ttctttatta ttgcgatgat gctatttata agaaaagata
    39421 aagttgaaat ggttgcgcca caatattatg aagagtataa cggaccgatt tatgattatc
    39481 gtgaacctgt gtatgagcgc ccacaaccga aagatgatta ttatgatgtg cctaaatatg
    39541 aaaaagaatt ggataaatca aatactgtat atgatcaaga acaggaaaga gataaatatg
    39601 atcaatttcc taaacgtgca gttgaaagtg aatataatca tgatgagcac actgaggaag
    39661 aaccatcagt attatccaga caggctaaat acaaacaaaa aagtactgaa gaactaggta
    39721 ttgaagatga tggttattat gcagaacctg aagttgatcc aaaagaattg aaagcacaac
    39781 aaaagcgaga aaaagctgaa attaaagcta agaaaaaaga aaaacgtaaa gcttataacc
    39841 aacgaatgaa agaacgtagg aaaaatcaac ctagcgcagt tagtcaacgt cgaatgaatt
    39901 ttgaagagcg acgtcaaatt tacaacaatg atatttctga agaacgcaat tcaagtgaag
    39961 ttaaggacaa aaaagagcaa gaataaatat tgatgatacc cagatttagt aagtagaggt
    40021 cttttgctta ttaatctggg tttttatatg aggttaatta tcgataatgt ctaattaaag
    40081 tgtttag
//
LOCUS       DAKPJH010000010        39904 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.010, whole genome shotgun sequence.
ACCESSION   DAKPJH010000010 DAKPJH010000000
VERSION     DAKPJH010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 39904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39904
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.010"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(292..1041)
                     /locus_tag="OY092_000434"
     CDS             complement(292..1041)
                     /locus_tag="OY092_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075408.1"
                     /translation="MSNTNKHYIEEEYATEQSRFFKRDIGFIFLYIFLVNILPIIIVF
                     LTFGLVAIFTQQAPWDFSFPISMNISYLLAVILSLAIFRRMHEDAFIPMIRSQIVAST
                     KYKWHILISFTLSIVLFLLLNHFEIFALNVDSFTVFDIYPLIREYGSISLIAIFSLTI
                     ILNTLICQLIFRHILIQELSRLIPLKITIVLSVILETLYYYPYINTWWEFIPALILAS
                     SATYLYLKSNRNFMVSYFYQLAVILVLHIFM"
     gene            1236..2813
                     /locus_tag="OY092_000435"
     CDS             1236..2813
                     /locus_tag="OY092_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HCX1075409.1"
                     /translation="MTFLTVMQFIVNIIIIGFLLTVIVIGLIWLIKDKRQSQHSVLRN
                     YPLLARIRYISEKMGPELRQYLFSGDNEGKPFSRNDYKNIVLAGKYNSRMTSFGTTKD
                     YQDGFYIQNTMFPMQRNEISVDNTTLLSTFIYKIANERLFSREEYRVPTKIDPYYLSD
                     DHAIKLGEHLKYPFILKRIVGQSGMSYGALGKNAITALSKGLAKAGTWMNTGEGGLSE
                     YHLKGNGDIIFQIGPGLFGVRDKEGNFSEGLFKEVAQLSNVRAFELKLAQGAKTRGGH
                     MEAEKVNEEIAKIRNVEPYKTINSPNRYEFIHNAEDLIRFVDQLQQLGQKPVGFKIVV
                     SKVSEIETLVRTMVELDKYPSFITIDGGEGGTGATFQELQDGVGLPLFTALPIVSGML
                     EKYGIRDKVKLAASGKLVTPDKIAIALGLGADFVNIARGMMISVGCIMSQQCHMNTCP
                     VGVATTDAKKEKALIVGEKQYRVTNYVTSLHEGLFNIAAAVGVSSPTEITADHIVYRK
                     IDGELQTIHDYKLKLIS"
     gene            complement(2981..3436)
                     /locus_tag="OY092_000436"
     CDS             complement(2981..3436)
                     /locus_tag="OY092_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1307 domain-containing protein"
                     /protein_id="HCX1075410.1"
                     /translation="MKKLCSLIVVALVCIIALSACGKEQTKTYEGDVSGKHVLTSITY
                     KNDKVLKQSTINTIKYDDLGMDKDEAKKLFAKSESIFKDLKGVKYKVDYKDKKAIEHL
                     DIDYTEVDMKKLNKRLGVSTKENKDISFEKLEKQLKHRGLKEKDKMDDK"
     gene            3795..4052
                     /locus_tag="OY092_000437"
     CDS             3795..4052
                     /locus_tag="OY092_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HCX1075411.1"
                     /translation="MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLE
                     DWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL"
     gene            4052..4318
                     /locus_tag="OY092_000438"
     CDS             4052..4318
                     /locus_tag="OY092_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HCX1075412.1"
                     /translation="MSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQ
                     SFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD"
     gene            4673..5749
                     /locus_tag="OY092_000439"
     CDS             4673..5749
                     /locus_tag="OY092_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HCX1075413.1"
                     /translation="MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNL
                     GGIFGKKNAENGQYSIMISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTI
                     TTDSGKEIRGIIGSKPPHVLTPEERKKPMEIKNMFIDIGVSSKGEAEEAGVEVGNMVT
                     PYSEFEVLANNKYLTAKAFDNRYGCALAIEVLQRLKDKNIGINLYSGATVQEEVGLRG
                     AKVAANTIKPDLAIAVDVGIAYDTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKH
                     IKDVAKKHNIEVQWDTTPGGGTDAGSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDY
                     ENSIRLVTEIVRSLNDETYKNIMW"
     gene            6095..6757
                     /locus_tag="OY092_000440"
     CDS             6095..6757
                     /locus_tag="OY092_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1075414.1"
                     /translation="MLLEIKDLVYEASDRVILNHINLKVDKGETIAIIGPSGSGKSTF
                     QKIICNLISPTSGTLYFKDKPYDDYEPEILRRHISYLMQQSDLFGETIEDNMIFPSLA
                     RNDKFDKKRAKQLIKDVGLGHYQLSSKIEHMSGGERQRIAIARQLMYTPDILLLDEST
                     SALDIHNKEKIENIIFKLADQGVAIMWITHSDDQSMRHFQKRITIVDGQISNIEELNQ
                     HE"
     gene            6750..7526
                     /gene="fetB"
                     /locus_tag="OY092_000441"
     CDS             6750..7526
                     /gene="fetB"
                     /locus_tag="OY092_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HCX1075415.1"
                     /translation="MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLII
                     LGFLLHYIFKINDKWLLVLCVFVIIVNASWNTISRSSPVMHHVFWISFVAIFVGTALP
                     LAGTIATGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAA
                     TPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVV
                     FIHTTATIMSALIATYLSYGQFFNARHQLVARNTDVKSES"
     gene            7920..9107
                     /locus_tag="OY092_000442"
     CDS             7920..9107
                     /locus_tag="OY092_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075416.1"
                     /translation="MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQL
                     VTMYALTFAICGPILVKLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIIS
                     SAAAALIIVKVLAITAMLSAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYT
                     FLFLIIVSIIVGFLMMIYLPKDQEIQRGSVNHEAPSHENHVTSKILRPAEVAKYLIIT
                     FLVLIANSVTFVFINPLILSNGHDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRW
                     LMISVSIFIVMMLLMNLILPGSGLLLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQV
                     MSWNMSSLNAGIGVGGIIGGLVMTHVSVQAITYTSAIIGALGLIVVLTLKNNHYAKTF
                     KSS"
     gene            complement(9169..10521)
                     /locus_tag="OY092_000443"
     CDS             complement(9169..10521)
                     /locus_tag="OY092_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HCX1075417.1"
                     /translation="MKINTTGGQIYGITQDRLDIFLGIPYAEPPVHDNRFKHSTLKTQ
                     WSEPIDATEIQPIPPQPDNKLEDFFSSQSATFTEHEDCLYLNIWKQHNDQSKKPVIIY
                     FYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKGFHSNNGLS
                     DQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGAL
                     RLDTLESARNKAQHFQKMMLDYIDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYA
                     PIKTDYIQNNYPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDV
                     QTAKQQSLAITHCYFKQPMKQFLQQLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILD
                     MIFWFGNLQILSAHQYPITDHLKFLSRQMQNDLANFAKSGKMPWPIYHNERRYYRTYQ
                     "
     gene            complement(10828..12465)
                     /locus_tag="OY092_000444"
     CDS             complement(10828..12465)
                     /locus_tag="OY092_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1075418.1"
                     /translation="MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPA
                     AIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVT
                     IIPIEAVSAVQYMSSWPWHWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
                     LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGII
                     FSFNSFQTIINMGSEIKNPEKNIARGIAISLSISAVLYIILQSTFITSMPQSMLQHSG
                     WNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHI
                     PKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGPTTVI
                     ALRKMGPTMTRPFRAKILKVMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFY
                     EYRMNWRNTKKQIGGSLWIIVYLIVLSILSFIGSKEFKGLNMIHYPFDFIVIIIVALI
                     FYYIGTTSSFESVYFRRATRINTKMHESLNNESKSSH"
     gene            12646..13245
                     /locus_tag="OY092_000445"
     CDS             12646..13245
                     /locus_tag="OY092_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HCX1075419.1"
                     /translation="MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWM
                     HPCYTLNNKNVVLIHGFKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTE
                     IQARSEEIKYYLAEAIKAEKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTP
                     GRQHQYIYHIGQAKRSETRQKRVEKYINQILEGKGMHDK"
     gene            13280..13389
                     /locus_tag="OY092_000446"
                     /pseudo
     CDS             13280..13389
                     /locus_tag="OY092_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501207.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            13469..13588
                     /locus_tag="OY092_000447"
     CDS             13469..13588
                     /locus_tag="OY092_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075420.1"
                     /translation="MGFCPPVTMDACALLQKFDFCNNISHFRHFFAIKQPIER"
     gene            13915..15141
                     /locus_tag="OY092_000448"
     CDS             13915..15141
                     /locus_tag="OY092_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075421.1"
                     /translation="MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTA
                     LRMINRMIEATEGQIEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPK
                     LLKWTKEEKDKRAKELIKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMD
                     EPFGALDPITRDTLQDLVKTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFD
                     TPDNILRHPANDFVRDFIGQNRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQ
                     KRVDTIFVVDSNNHLLGFLDIEDINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTI
                     LKRNVRNVPVVDDKQRLVGLITRANVVDIVYDTIWGDSEDAVQTEHVGEDTASSKMHE
                     QHTTNVKVRDIGDDKS"
     gene            15138..15773
                     /locus_tag="OY092_000449"
     CDS             15138..15773
                     /locus_tag="OY092_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075422.1"
                     /translation="MIEFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKT
                     KRTANIILTVAGVLQTIPTLAVLAIMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQ
                     NIDSNIKEAGKSMGMTQFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAGG
                     LGDFIFNGLNLYDPLMIVTATVLVTALALGVDALLALVEKWVVPKGLKVSG"
     gene            15790..16731
                     /locus_tag="OY092_000450"
     CDS             15790..16731
                     /locus_tag="OY092_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1075423.1"
                     /translation="MKKIKYILVVFVLSLTVLSGCSLPGLGSKSTKNDVKITALSTSE
                     SQIISHMLRLLIEHDTHGKIKPTLVNNLGSSTIQHNALINGDANISGVRYNGTDLTGA
                     LKEAPIKDPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTEETAKKYHLETVSDL
                     AKHSKDLRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIGLVYDALNSEKLDVAL
                     GYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSE
                     MQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK"
     gene            16731..17426
                     /locus_tag="OY092_000451"
     CDS             16731..17426
                     /locus_tag="OY092_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075424.1"
                     /translation="MEGNLLQQLFNYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIP
                     LGILLARYTKLSGFVITIANIIQTVPVIAMLAILMLVMGLGSETVVLTVFLYALLPII
                     KNTYTGIASVDANIKDAGKGMGMTRNQVLRMIELPLSVSVIIGGIRIALVVAIGVVAV
                     GSFIGAPTLGDIVIRGTNATDGTTFILAGAIPIAIIAIVIDVLLRFLEKRLDPTTRHR
                     KNQSNHRPQSINM"
     gene            17720..19120
                     /locus_tag="OY092_000452"
     CDS             17720..19120
                     /locus_tag="OY092_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075425.1"
                     /translation="MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSS
                     DVGTINIAVSLSALFAGLFIVGAGDVADKFGRVKITYVGLILNVIGSLLIIITPLPAF
                     LIIGRIIQGLSAACIMPSTLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMA
                     TYIGWRSIFVVSILLTLLAMYLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLS
                     LNVIITQTSHFGLVSPLILGLIIVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGAT
                     ISNFLLNGVAGGALIVINTYYQQQLGFNSSQTGYISLTYLIAVLSMIRVGEKILSQHG
                     PKRPLLLGSGFTVIGLILLSLTFLPEMWYIVSSIVGYLLFGTGLGLYATPSTDTAVAS
                     APDDKSGVASGVYKMASSLGNAFGVAVSGTVYTVLAANLNLNLGGFTGMMFNALLAIV
                     AFLVILLLVPKNQTNL"
     gene            19346..20281
                     /locus_tag="OY092_000453"
     CDS             19346..20281
                     /locus_tag="OY092_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HCX1075426.1"
                     /translation="MKIAIAGSGALGSGFGAKLFQAGYNVTLIDGYTSHVEAVKQHGL
                     NITINGEAFELNIPMYHFNDQPDESIYDVVFLFPKSMQLKEVMEAMKSHIDNETIVVC
                     TMNGLKHEEVIAQYVAQSQIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENV
                     IKVAELLNEAELNGVISKDLYQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLI
                     YKLTQEIVHVATIDNVHLNVDEVFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYIN
                     GAVATLGKKRHIEAPVNRFITDLIHTKESQRHAQD"
     gene            20605..21456
                     /locus_tag="OY092_000454"
     CDS             20605..21456
                     /locus_tag="OY092_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCX1075427.1"
                     /translation="MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAV
                     NVKAYIGDILKADTIDQALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDSAK
                     KHDVKKVIAQSIAFMYEPGEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYV
                     VLRFGWLYGPGTWYGKDGMIYNQFMDGEVTLSDGVTSFVHLDDAVETSIQAIHFENGI
                     YNVADDAPVKGSEFAEWYKEQLGVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYKTWK
                     DGMNPIK"
     gene            complement(21547..23043)
                     /locus_tag="OY092_000455"
     CDS             complement(21547..23043)
                     /locus_tag="OY092_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase FLP"
                     /protein_id="HCX1075428.1"
                     /translation="MTTKKLYFLSISIIILVAISIAIYITLNSNTKTRLTNDSQQQID
                     TIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFT
                     GLAILKLAQEGRLNLNDAVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDS
                     VTNKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNYDLLGLIIQNVTKQSYTKYITNSW
                     LKPLNMTHTSFKQTNNKTKHDAIGYELQGSTPVVSKPEFNLWDTPSAYMMTSTEDLEH
                     WIKFQLNPPDKYKSLVQQSHKNLSSTIGEPNANAYASGWFTNNDEHLVFHSGTLDNFS
                     SFILLNPKQNYGIVVLANLNSEYVPKLVEHLNTQIVNHKRYSTVASMLNQYKNQFNIV
                     TVLMTTLILLAFIFSAYRAWQMRHGKIILRKSKLTTFSSWLTLCLCIAIALILYALPY
                     LILGSNNWSFVLTWLPIEIKLALITILIALFSTLIVILLFLHTKITKT"
     gene            23275..25104
                     /locus_tag="OY092_000456"
     CDS             23275..25104
                     /locus_tag="OY092_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HCX1075429.1"
                     /translation="MFNQFKRLIIGQPKKNRELKDEKISKFKGLAILSSDALSSVAYG
                     PEQILITLSVVGAVATWYTLPIAGAVLILLAALIMSYRQIIYAYPKGGGAYMVSKTNL
                     GEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPSLYGHKVLIACLLVLFILILNL
                     RGLTESATVLSYPVYLFIIGLVILIFIGTFRVATGDIQPHMHASVGTAVPGVTLFLLL
                     KAFSSGASSLTGVEAISNAVTNFREPSANNAVKTLIAMGSILAFLLVGIVGLAYVYGI
                     MPQTETTVLSQLAMQIFGDNAAFYFVQATTVMILVLAANTGFTAFPMLAASMSKDKYM
                     PRMFTVRGDRLGYSNSIIILGVLAIILIIVFDGMTEDLIPLYAVGVFIPFTLAQFGMV
                     IKWIHERPKNWLSKLSVNLLGGIVTFIVFMILLITKFSQVWPILIFLPFVVIFFLKIN
                     KHYRDIAEQLRSDIDVLNVDVVDRNLAIVPITSITTAVDKSIYYAQMLANNDVIAVHV
                     SFGDEDEKAFQEKWKRHFPDVRLVILHSEYRSIIRPISRFIDKINRKANDQNYMITVV
                     IPEFITKKRWHNLLHNQTSLRMKLYLIYQKNVNVCTIPFKLKK"
     gene            complement(25244..27322)
                     /locus_tag="OY092_000457"
     CDS             complement(25244..27322)
                     /locus_tag="OY092_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HCX1075430.1"
                     /translation="MALLEAFLIFIFAVIISSVINNRFPQIPTAFIQIALGVVIFIIP
                     IQVDFQFNSEVFMFAVIAPLLFVEGTHVSRTKLLEYRKPILLMSMALVFATVVGVGYF
                     IHWIWPALPMPAAFAIAAILCPTDAVAVSAITRGKLLPKGSMTILEGESLLNDAAGII
                     SFKIAVTALVTGTFSLFQAVEQFIISTILGVLIGAIIGFVIVRIRIDLTANKGLKDNN
                     TLTFIQLLTPFVVYFLAEEVHASGIIAVVIAGLIHGLERDRLIRAQTELQMNYHQIWN
                     TFSYALNGFVFVVLGFMIPTVVIDIFQTEPDNFSFLIVITILIAIAIYACRFIWVYFW
                     YKDFYFPKNIQSYLDEEHDSHETPPSRVRYAFIMTMCGIHGTISLSMALTLPFIITQG
                     QAFEYRNDLLFIASFMVLISLILAQIVLPLITPSAEDTTFKGMTYQSAKIFIVQKVIE
                     HFKNESKKDKNDTNYRPVLNQYYGELLFLLNSEPDNQNTKELKRLEDIAKVIETSTLE
                     RLIDKGKATYQDINNYRNIVELTETHRTASFVEKFANFFKMLWLRLKAMKHYKALNKE
                     SKKQEFENSFKDVQKIMRIVNHNIILRLKEEQNSTNVLEVSLVINHYYDMSRSLKWRA
                     QRRKELQENSNQIIPQAMFHNHKLEALYLQRHLLDELIRKNKINNIVAAQIRENINYN
                     EIVLSLQSKH"
     gene            complement(27460..28869)
                     /locus_tag="OY092_000458"
     CDS             complement(27460..28869)
                     /locus_tag="OY092_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1075431.1"
                     /translation="MARKLNRELNNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLF
                     TYMIIGVVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLCWIVSSM
                     SDLTAMGQYFAFWYPQVPNWITVLFIVLILISFNLLGARLFGELEFWFSIIKVVTIIA
                     MVIVGLVLIFFSFKTHYGHASFTNLISHGGMFPGGTFGFLMSFQIAVYSFIGIELIGV
                     TAGETKDPEKTLPKAINNVPIRILLFYIGGLLVIMSVIPWNDIDPNSSPFVKLFTLIG
                     VPFAAGVVNFVVLTAAASATNSGIYSNSRILFGLSQQGLGPKVLNKTNSHGVPYLSML
                     VSSIALLIAALLNYIFPNAIQLFIYVTTLSTVLFLVVWAMIIVAYLMYLKKHPEAHKN
                     SKFKLIGGKPIAYIILAFFFFVFILLFFSDETRAAIYISPFWFIFLFFFYKKYKTNAE
                     KLAYEQRQNDSGHFRYDNQ"
     gene            29155..29961
                     /locus_tag="OY092_000459"
     CDS             29155..29961
                     /locus_tag="OY092_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HCX1075432.1"
                     /translation="MKIGTIADLHIDRHNKKTSEDYLEALVEIVKYKKLDILLIAGDI
                     SNHYQLTHQFITQLTKQLDIPVKFVPGNHDLWEVESMTTQDIWNNYKRMSQCLVGKPF
                     IVNEEWAIIGHTGWYDYSFAAQRFSLDELQKVKHYGATWQDKERISWGISDQNLSKIA
                     VEQVKKDILEVGNRRVILVTHVVTHPDFIVPMPHRIFDFYNAFIGTSDFNPLYAMFDI
                     PYSIMGHVHFRKSVMDDGRCYLCPCLGYPRQWRSEDIYQEINETIQIIEI"
     gene            complement(30024..30680)
                     /locus_tag="OY092_000460"
     CDS             complement(30024..30680)
                     /locus_tag="OY092_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HCX1075433.1"
                     /translation="MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEI
                     MRHWPTHPNNPHKGYVGHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDL
                     KGIIDQGQPVLIYHTNLGSKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPL
                     WSHIRRGLVLPAIIPNRKQIIKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
                     "
     gene            30793..31266
                     /locus_tag="OY092_000461"
     CDS             30793..31266
                     /locus_tag="OY092_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCX1075434.1"
                     /translation="MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIA
                     DLQLKNNVDLVGILGLCIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQ
                     GAVPKAVQQKMEEVHHYIHQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG"
     gene            complement(31389..32600)
                     /locus_tag="OY092_000462"
     CDS             complement(31389..32600)
                     /locus_tag="OY092_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HCX1075435.1"
                     /translation="MQSSSSKTKQFSFLLLITLGVMTAFGPLTIDMYVPSLPKVQGDF
                     GSTTSEIQLTLSFTMIGLALGQFIFGPLSDAFGRKRIAVSILITFILASGLSVFVTQL
                     PLFLTLRLIQGLTGGGVIVIAKASAGDKFSGNALAKFLASLMVVNGIITILAPLAGGL
                     ALSVATWRAIFTILTIVALIILIGVASQLPKTPKEELKQVNFSSVIKDFGSLLKKPAF
                     IIPMLLQGLTYVMLFSYSSASPFITQKLYNMTPQQFSIMFAVNGVGLIIVSQVVALLV
                     EKLHRHILLIILTIIQVVGVALIILTLTFHLPLWVLLIAFFLNVCPVTSIGPLGFTMA
                     MEERTGGSGNASSLLGLFQFILGGTVAPLVGLKGEFNTSPYMIIIFITAILLVSLQII
                     YFKMIKKQHVA"
     gene            complement(32779..33438)
                     /locus_tag="OY092_000463"
     CDS             complement(32779..33438)
                     /locus_tag="OY092_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075436.1"
                     /translation="MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPER
                     YYNGRDYRREQILEEENEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDP
                     KVSQNYKKQVENQDGQINQQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADS
                     KLTQFYQDQINKLTEANNALKNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGA
                     N"
     gene            complement(33498..34640)
                     /locus_tag="OY092_000464"
     CDS             complement(33498..34640)
                     /locus_tag="OY092_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HCX1075437.1"
                     /translation="MQLQKIVIAPDSFKESMTAQQVGNIIKQAFTNVYGNTLHYDIIP
                     MADGGEGTTDALMHATGATKYTVIVNDPLMRPIEACYARADEQQIAIIEMAAASGLDL
                     LEKEERNPLYTSSYGTGELIKDALNHGAKTIILGIGGSATNDGGTGMLSALGVKFTDV
                     NGDLLQMNGANLAHIAQIDITNLDSRLKEVTFKVACDVSNPLLGENGATYIYGPQKGA
                     DAKMIPKLDFAMSHYHDKIKMCTGKSVNQIPGSGAAGGMGAALLAFCETTLTKGIDVV
                     FDITDFHQRIKDADLVITGEGRMDYQTIFGKTPVGVALAAKQYHIPVIAICGSLGENY
                     QHVYDFGIDSAYSIISSPSTLEDVLQNSEQNLLNTATDIARILKLQ"
     gene            34908..35294
                     /gene="gtxA"
                     /locus_tag="OY092_000465"
     CDS             34908..35294
                     /gene="gtxA"
                     /locus_tag="OY092_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase GtxA"
                     /protein_id="HCX1075438.1"
                     /translation="MKLTQTHAEILKFIIVGGINTLNYYVVYLLLLKLLHIEYMISHI
                     TGFIVAFVISYYLNCYFVYRVKPTWRKFISFPITQLVNVSLQTVLLYVFVSWLNLPAE
                     IAPFAGLVITIPITFILSKWILKDSN"
     gene            35428..35535
                     /locus_tag="OY092_000466"
     CDS             35428..35535
                     /locus_tag="OY092_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HCX1075439.1"
                     /translation="MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK"
     gene            36295..38058
                     /locus_tag="OY092_000467"
     CDS             36295..38058
                     /locus_tag="OY092_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075440.1"
                     /translation="MNNQTNWIKILSGFASDSKWKIMLSILLSIISVFSGLVPYWAVF
                     KIILMMINNAYTINSIMVYIFIALIAYISQVCCFGASTMLSHITAYEILSEIRKKLAQ
                     KLMRLPLGIVESKKIGELKNIFVDKVETIELPLAHMIPEVIGNLLLSATIFLYIMLID
                     WRMASALLVTIPISIFAFKKVMSGFNETYAEQMKSNNYMNSAIVEFIEGIEVIKTFNQ
                     SQSSYKKYKDAVDNYKIHTLNWFKNTWGYMNLGASVLPSTFLGILPVGMYLISINQLN
                     YAEFFLCIVLSLGVVAPIKNFTNYVNHLKSIQYALTEVNQILSLEELVLSTKFKKPQH
                     YEIAFNNVGFSYNKDKDDLVFKHLSFTVPENNFTAIVGASGSGKSTIAKLISRYWDVT
                     SGEITIGGINIKDIESKQLNDLVGFVGQDNFLLNLTFKENIKLGNPEATDEAVEKAAK
                     LAQCHEFIKKLPDGYDTNVGTVGDELSGGEKQRVTIARMILKDAPIIVLDEATAYVDP
                     DNEQKIQEALNVLTQDKTLIVIAHRLSTIQHADQIIVLGKQQILEKGSHHLLLKLNGN
                     YKKMWDTHMHTKDWGINTGHN"
     gene            38083..39816
                     /locus_tag="OY092_000468"
     CDS             38083..39816
                     /locus_tag="OY092_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075441.1"
                     /translation="MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIF
                     NNVLSHKPIYMKDILNVVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKL
                     KNVRLGYFNSHHSNELTTIVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQ
                     VSLLACIGVLLSFLAIQLLERKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKEN
                     TSLKSFNQAVNESKRINTKIEMQYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLP
                     TLIMISIFSFVIFDSVENINSAAHVLEMIDMTIDDIEKIKNAPELDENGKNLTIKNEN
                     IAFQNVNFSYDDKQVIKNVNFEVPTQTSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIR
                     IDGVDIKDMTLSTLMSKISAVFQKVYLFNDTIENNILFGNPGATKEEIIRVAKQACCH
                     DFIMSLPEGYQTMLNEKGSNLSGGEKQRISIARAILKDAPIIILDEATASIDPENEQL
                     IQTAINELSKGKTVITIAHKLETIKNADQIIVLNDGEIIQRGSHNELIQKPGMYQDFI
                     RIKSKSAGWKL"
BASE COUNT        13493 a         5800 c         7493 g        13118 t
ORIGIN      
        1 cccacacccc aacttgcatt gtctgtagaa attgggaatc caatttctct ttgttggggc
       61 ccctgactag aattgaaaaa agcttgttac aagcgcattt tcgttcagtc aactactgcc
      121 aatataactt tgtagagcat tgaacattga tttatgtctc aggctctcta tatggctcgt
      181 ttttagaacg acagtatatc taaataaagc acgcttagaa gtgagttgcg atactgactt
      241 ttaagtgtgc tttttgatgt gtatggataa tggataatgc tctgaaaaat tttacatgaa
      301 aatatgcaaa acgagtataa ctgctaattg atagaaatag ctcaccataa aattacggtt
      361 tgattttaaa tataagtaag tcgcactact agctagtatc aatgctggaa tgaattccca
      421 ccatgtatta atgtatggat aatagtacag tgtttcaagg ataacggata atactattgt
      481 aatctttaaa ggtattaatc tgcttaattc ttgaattaaa atatgacgga aaataagttg
      541 acaaatcaaa gtatttaata taatggttaa cgaaaatata gctattaaac tgatggaacc
      601 atattctcta atgagcgggt aaatgtcaaa gacagtaaag gaatctacat ttagtgcgaa
      661 aatttcgaaa tgatttaaaa gtaaaaagag tacgatactt aatgtaaatg atataagaat
      721 atgccattta tatttggtgc tggcaacgat ttgcgaacgt atcattggaa taaacgcatc
      781 ttcatgcatc cgacgaaaaa tagctaatga aagaataact gcgagtaaat agctaatgtt
      841 cattgaaata ggaaaagaga aatcccacgg agcttgttga gtgaatatag ctactaaccc
      901 aaaagttaaa aaaacgataa tgatcggcaa gatgttaacc aaaaatatgt aaaggaaaat
      961 aaatccaata tcacgtttga aaaaacgcga ttgttcggta gcgtattctt cttctatgta
     1021 atgtttattt gtatttgaca tagtatacct cttaaatagt tgtattatat agatacttta
     1081 gcacatatta ctttgtattg tatgttttat acattaaaat ttaaaatgaa aaacatatca
     1141 taaaattgtt ttataaaatg aagcgcttcc attgtgtttt attttgtaag gtgtatcata
     1201 aatattgaat tgaaattttg gggggaggta ttgtaatgac gtttcttaca gtcatgcaat
     1261 ttatagttaa tattatcatt ataggcttcc tgcttacggt tattgttatc gggcttattt
     1321 ggttaattaa agataaaaga caatcacaac atagtgtatt aaggaattat cctttactag
     1381 cacgtattag atatatttca gaaaaaatgg ggccggaatt acgtcagtat ttattttctg
     1441 gggataatga agggaaacct ttttcacgta atgattataa aaatatcgtt ttggctggaa
     1501 aatataactc tcgtatgacc agcttcggta ctactaaaga ttatcaagac ggcttttaca
     1561 tacagaacac aatgtttccg atgcaacgta atgagatttc agtagataat acaacattgt
     1621 tatcaacatt catttataaa atcgcgaatg agcgtttatt tagtcgtgaa gaatatcgtg
     1681 taccgacaaa gattgatccg tattacttaa gtgatgatca tgcaataaaa ttaggtgaac
     1741 atttaaaata tccatttatt ttaaaacgta tcgtaggaca atctggtatg agttatggag
     1801 ccttaggaaa aaatgccatt acagctttat ctaaaggtct agctaaagcg ggaacttgga
     1861 tgaatacagg tgaaggtggc ttatcagaat atcatttaaa aggtaatggg gatatcattt
     1921 tccaaattgg tcccggttta tttggtgttc gtgataaaga aggtaatttt agtgaaggtt
     1981 tatttaaaga ggttgcacag ttatctaacg tacgcgcatt tgagctgaag ttggcacaag
     2041 gtgctaagac tcgtggtggt catatggaag ctgaaaaggt aaacgaagaa attgctaaaa
     2101 tccgaaatgt tgaaccttat aaaacaatca attcacctaa ccgttacgaa tttattcata
     2161 atgctgaaga tttgattcgt ttcgtcgatc agttgcagca attaggtcaa aaaccagtag
     2221 gattcaaaat tgtagtaagc aaagtttcag aaattgaaac acttgtacgt acgatggtgg
     2281 aattagataa gtatccaagc tttattacga ttgatggtgg tgaaggtggt actggtgcaa
     2341 cattccaaga attacaagat ggtgttggct taccgctatt tacagctcta cctattgtgt
     2401 ctggcatgtt agaaaaatat ggtattcgtg ataaagtaaa attggcggca tctggtaagt
     2461 tagtgacacc tgataaaatt gcgattgcac taggtttagg tgcagatttt gttaatattg
     2521 cacgtggtat gatgattagt gtcggttgta ttatgagtca acaatgtcat atgaatacat
     2581 gtcctgtagg tgttgcaacg acagatgcga aaaaagaaaa agcattgatt gttggagaaa
     2641 agcaatatcg tgtcacaaac tatgtaacaa gtttgcatga aggcttattc aatattgcag
     2701 cagctgttgg cgtatccagt cctacagaaa ttactgctga tcatattgta tatcgaaaaa
     2761 tcgatggtga attgcaaacg atacatgatt ataaattaaa actcattagt taacttattt
     2821 atttcgggaa aatgaaagca gcggatttta gcgttactgc aaataatttt atattagtag
     2881 tggatgctgg tcacagaaga atttcaaata ttaaagccct cagaatatga attaaggttt
     2941 gtaaccttag tcttatctga gggcattttt aagttataaa ctatttatcg tccattttat
     3001 ctttttcttt taaacctctg tgctttaatt gcttttcaag tttttcaaaa ctaatatctt
     3061 tattttcttt agttgaaaca ccaagacgtt tatttaactt tttcatgtca acttctgtgt
     3121 aatctatgtc taagtgttca attgcttttt tatctttata gtctactttg tattttacgc
     3181 ctttaaggtc tttgaaaata ctttcagatt tggcgaataa ctttttggct tcgtctttat
     3241 ccatacctag atcgtcatat ttaattgtgt tgattgtaga ctgttttaaa actttatcat
     3301 ttttatatgt gatagaagtt agtacatgtt taccactaac atcaccttca tatgttttgg
     3361 tttgttcttt accacaagct gataatgcaa tgatacaaac taatgctact acaattaatg
     3421 aacataattt tttcaaagtc agtcgccttc tttcgatatt tgtattataa agaaattata
     3481 acatttacta aaaaatgatg ttattcaaaa atttaaattt tgtcattttt tttggagata
     3541 tgaggttttt gaagcggatt tctcacaaag tttttaaaat tattaagtct gaaaatgata
     3601 aagcggtagg gaacgtagtg tgttccactg ctgatttctt tttgagcatt atagacggta
     3661 tgttggaaga aaagaacaaa agcttgtgta cgatagcata taggtattaa gaatacgatg
     3721 aactcgttgg taatattgac gtactgaagt gcgtacgcta taattagagt aacagaagac
     3781 aaaggagggt ttatatgatt atcactagcc ctacagaagc gagaaaagat ttttatcaat
     3841 tactaaaaaa tgttaataat aatcacgaac caatttatat tagtggcaat aatgccgaaa
     3901 ataatgctgt gattataggt ttagaagatt ggaaaagtat acaagagaca atatatcttg
     3961 aatctactgg tacaatggac aaagtaagag aaagagaaaa agataatagt ggtacaacaa
     4021 atatagatga tattgattgg gataatcttt aatgagcaat tacacggtta agattaaaaa
     4081 ttcagcgaaa tcagatttaa agaaaataaa acattcttat ttaaagaagt catttttaga
     4141 aattgttgag actttaaaaa atgatccgta taaaataaca caatcttttg aaaaattaga
     4201 gcctaaatat ttagagcgat attcaagaag aattaaccat cagcacaggg tcgtctatac
     4261 cgtagatgat cgaaataaag aagtattaat actatcggca tggtcacatt atgattaatg
     4321 aatattcaat atctgaataa ctttaatgat aagttaatta aagaaactag tatttaagtg
     4381 tagggaaaat agcgacgtta atgcgttgtt atctctacac tttttaattt tataatagcg
     4441 caagactaaa aagattgaaa ttagtaacaa taaaagaata acgtattata ataaggaatt
     4501 ttaaattctg actttttcgg aatattaaat tttagaaata tgaggttttt aagcggattc
     4561 ctcacaaaat tttaaaaata tttaagcctg aaaatgataa agcggtaggg aacgtttttc
     4621 tgaaagttag tgatacaata gttttaagtt gaaatacagg aggatgaata acatgaatca
     4681 gtcagtcaaa ttacttaaac atttaacaga tgtaaacggc attgctggtt atgaaatgca
     4741 agttaaagaa gcaatgcgta actatataga gcctgtcagt gatcaaatta ttgaagataa
     4801 cttgggtggc atttttggaa agaaaaatgc tgagaatggt caatactcaa ttatgatttc
     4861 tggtcatatg gatgaagttg gttttatggt aacaaagatt gataaacatg gttttatttc
     4921 atttacgcca gttggtggat ggtggaatca agtcatgcta tctcaaaaag taacgattac
     4981 aacagattcg ggcaaagaaa ttagaggtat catcggttct aaaccgccac atgtcttaac
     5041 gcctgaagaa cgtaaaaagc caatggaaat caaaaatatg tttatagata ttggtgttag
     5101 tagcaaggga gaagctgaag aagctggcgt tgaagtaggc aatatggtta cgccatatag
     5161 tgaatttgaa gtgcttgcaa ataataaata tttaactgcg aaagcatttg ataatcgcta
     5221 tggctgtgca ttagctattg aggtattaca acgtttaaaa gataaaaata ttggcatcaa
     5281 cttatacagt ggtgccacag tgcaagaaga agttggtttg cgtggtgcta aagtggcagc
     5341 gaatacgatt aaaccagact tggcgatagc cgtcgatgta ggtattgctt atgatacccc
     5401 aggtatgtca ggtcaaacga gcgatagtaa actaggcggt ggtccagttg ttattatgat
     5461 ggatgctaca agtattgcgc accaaggttt gcgtaagcat attaaagatg tagctaagaa
     5521 acataacatc gaagtacaat gggatacgac accaggtgga ggtacagatg cgggaagtat
     5581 tcatgtcgca aatgaaggta ttccaacgat gacaataggt gtcacgttac gatatatgca
     5641 ctctaatgta tcggtactca atgtggatga ttatgaaaat tctatccgtc ttgttactga
     5701 aattgtccgt tcattgaatg atgaaactta taaaaatatc atgtggtagt caaatccata
     5761 aataataaag aaagtcttta atatgatgtc atgcaagaac taagttagat gcttagttag
     5821 catgagatgt catgttaaag gcttttttat tttcaaaaag tgagaataag tcactgcagt
     5881 gtacttcaat tttgacataa atgttaaaaa aatttcccgg aatgaaatgg cactaaattt
     5941 ttcaaaaatg ggaatactat atttgatatg tcttattaga gcgattttaa ggggtaataa
     6001 gcattgacta ggtcgactta taggtaagca cactattcaa gaaaaggaat accctattat
     6061 atcgaaataa ctcatgatac gaggaggggt aaatatgttg ttagagataa aagatttagt
     6121 atatgaggca agtgatagag tcatactaaa tcatattaat ttaaaagtag ataaaggtga
     6181 aaccattgcg attattggtc cttcaggtag tgggaaaagt acatttcaaa aaataatatg
     6241 caatttaatt agcccaacca gtggaacact ttactttaaa gataaaccat atgatgatta
     6301 cgaaccagaa atattacgcc gacacattag ctatttgatg caacaaagcg atttgtttgg
     6361 tgaaacgatt gaagataata tgatttttcc gtctcttgcg cgtaatgata aatttgataa
     6421 gaaacgtgct aagcaattaa ttaaagatgt aggtttagga cactatcaat taagttctaa
     6481 aatagaacat atgtcaggtg gcgagcgtca aaggatcgcg attgcacgcc aattaatgta
     6541 taccccagac atccttctat tagatgaatc aacaagtgcg ttagatattc ataataaaga
     6601 aaaaatagaa aatatcattt ttaaattagc agatcaaggc gtggcaatta tgtggattac
     6661 ccacagcgat gaccaaagta tgcgacactt tcaaaagcgt ataacaattg ttgatggtca
     6721 aatttctaat atagaggagt tgaaccaaca tgagtaatac ggcattagga ctgacggcac
     6781 tgctattagt tattccaatt attatttctt ataaagaagg tctacatatt attaaagatt
     6841 tgattgtggc gacactacgt gcggtcgtac aattaatcat tttaggattc ttactgcact
     6901 atatttttaa aattaatgac aaatggctat tagtattatg tgtatttgtc attattgtta
     6961 atgcttcttg gaatacgatt agtcgatcat cacctgtcat gcatcatgtc ttttggattt
     7021 cctttgtggc tatctttgtt ggaacggcat taccgcttgc aggtactatt gcgacagggg
     7081 ccatccaatt tacagccaat gaagttatac ctatcggcgg catgcttgca aataatggct
     7141 tgattgcaat taatttagct taccagaatt tagatcgtgc attcgtacaa gatggtacta
     7201 atattgaatc taaattatca cttgcagcta cacctaaatt ggcttctaaa ggtgcaatac
     7261 gtgaaagtat tcgtttagct atagtgccaa caattgattc ggttaaaaca tatgggcttg
     7321 tgtcgattcc tggtatgatg acaggcttaa ttattggtgg cgtaccacct ttacaagcga
     7381 ttaaatttca attgttagtc gtgtttattc atacaactgc gaccattatg tctgctttga
     7441 ttgcgacata tttaagctat ggtcaatttt tcaatgcaag acatcaatta gtagcacgaa
     7501 atacggatgt taagagtgag tcatgataga ttttaccgca tcatatttag gcattagttt
     7561 taattggaaa taaagtgatg cacatatagt aatgttatta tttagcgcag cgaaaatatt
     7621 cataaaggca cgcatacttt gtagtcagtt atctgttctg acatataaag cgtgcgtgct
     7681 tttttggagt cattgttgaa actgaagtaa ttatacataa ttattaaatg acatacttgt
     7741 gttaattttt caaatactga aaaacaattt caataatttt ccaattaagc acagaaaatt
     7801 aaagcaaaat attatataat agaacggtta tatataaaat tgtgttgcac acatttttta
     7861 ataaatcgtt attctaaggg aaatgaatat cggaaatttt gtttgaaagg agttttaaaa
     7921 tgtcaatcat gcgactattt acattcattt taagtatttt tatcgtagga atggttgaaa
     7981 tgatggttgc aggaattatg aacttgatga gtcaggactt acatgtatca gaagctgtcg
     8041 ttggtcaatt agtgacaatg tacgctttaa catttgcgat atgtggacct attctggtta
     8101 aattaacgaa ccgtttttca tcaaggcctg tattattatg gacattactt atatttatca
     8161 ttggtaatgg cattattgct gtagcgccaa atttttcaat attagtagtt ggtagaatta
     8221 tctcatctgc agcagcagca ctaattattg tgaaagtatt agctattaca gcgatgttat
     8281 cagcacctaa aaatcgtggc aaaatgattg gacttgtcta tacaggattt agtggtgcca
     8341 atgtttttgg tgtaccaatt ggaacggtta tcggcgattt agtaggttgg cgctatacat
     8401 ttctattctt aattattgtg agtattattg ttggcttctt gatgatgatc tatttaccga
     8461 aggatcagga aatacaacga ggctctgtga atcatgaggc accatctcat gaaaatcatg
     8521 ttacttcgaa aatattaaga cctgctgaag tagcaaaata tttaattatt acgtttttag
     8581 tattgattgc aaactcagtg acattcgtct ttataaatcc acttatttta tctaatggtc
     8641 atgatatgtc attcgtttca ttagcacttc tagtaaatgg aatcgctggc gttattggaa
     8701 catcattagg tggtatattc tccgataaaa ttacaagtaa gcgttggtta atgatttctg
     8761 tttcaatttt tatcgtgatg atgttactta tgaatttaat cttacctggt tcaggtctat
     8821 tgttagcagg actatttatt tggaatatca tgcaatggag tactaatcca gcagtgcaaa
     8881 gcggtgtgat tcaacatgtt gaaggcgaca caagccaagt aatgagttgg aacatgtcta
     8941 gtttaaacgc tggtattggt gttggaggca ttattggagg cttggtcatg acacatgttt
     9001 ctgttcaagc tatcacgtat acgagtgcca tcattggcgc attaggatta atcgttgttt
     9061 taacattgaa aaataatcat tatgctaaaa catttaaatc atcataattc tcatatgaaa
     9121 agcacgcctg ctatcaaatt caggtgtgct tttttagatg caataacgtt attgatatgt
     9181 gcgataatag cgacgttcat tatgatatat cggccaaggc attttaccgc ttttagcaaa
     9241 attagctaaa tcattttgca tttgtcgact taaaaattta agatgatcag tgattggata
     9301 ctgatgcgct gataaaattt gtaagtttcc gaaccaaaat atcatatcaa gaatatggta
     9361 cgcactgcga tagtgtgcgc tagaagtatc atgccatgca aattcagcaa gccatagttg
     9421 tgcgtttgaa tcttgtatat taagttgttg taaaaattgc ttcatcggct gtttgaaata
     9481 acaatgtgta atcgctaaag attgttgctt cgccgtctga acatcttcgt attttaaagg
     9541 aatatcattt aattccataa tgtcaataaa gcgttgcggt gataattttt tctgttcact
     9601 agtaatataa atatcgcctt catcttttgt ataacatgca aaaattggtt tcgttgttgg
     9661 ataattattt tgtatataat ctgttttaat aggcgcatat attaaatcaa gccctttaga
     9721 aggtcctcga gattgtttta gcttcgccat cagcataaga atatcatctg tcgataatga
     9781 tgtaacatca tctgtatcta tataatcgag catcattttt tggaaatgtt gtgctttatt
     9841 gcgtgcactc tcaagggtgt ctaatcgtag tgcgccactt agtagaacga ctttatggaa
     9901 gtatggctca atgtcaggta ttttaagtaa agtcaaaatg ctcatactgc ctgcagactg
     9961 acccattaaa gtaatgttat tagcgtcgcc accgaaggat tcaataaatt gatgcaccca
    10021 ttttatgaca ttgatttgat ctgaaagtcc attattggaa tgaaaccctt tattaaaata
    10081 tgaccagtct aaatatccta atgcgcctaa acgataattg catgtaataa caataatgtc
    10141 gttattttgt actaaatgtg ccggttgata gagttcggct gtaccatgac cattttcaaa
    10201 actaccacca taaaaataaa tgatgacagg tttcttcgac tgatcattat gttgtttcca
    10261 aatatttaga tataaacagt cttcatgttc ggtaaaagtt gcagattgtg aggagaaaaa
    10321 atcttctaat ttgttgtctg gttgcggtgg gatgggttgt atttcagttg catcaattgg
    10381 ctctgaccat tgtgttttta acgtagaatg tttaaagcga ttgtcatgaa ctggtggttc
    10441 tgcataagga atgcctaaga agatatctaa acgatcttgt gtaataccat aaatttgacc
    10501 acctgtagta ttaatcttca tatttattaa cctcctttat catccccaat ttaatcatac
    10561 cacggtctat agatgatagg tgacaagtat aacaagacaa ttttgtgact gaatcagacg
    10621 agcttgatat ctgttttaac tcaaaccatt ttcagcatta tatgatgttc ttctacagtg
    10681 acatttcatt acaatatcac tctcgccatc ttgttatgtt agttatttat aaccgatttt
    10741 caaaataaaa aaccaaccaa gatgttgaaa tcaatggttg gttaatgtgt gtgttgaaat
    10801 catatatggc actgcatttt aaaatattta atgagatgac tttgattcat tatttagtga
    10861 ctcatgcatc ttcgtattga ttcgtgttgc gcgacggaaa tagacgcttt caaatgaact
    10921 cgttgtaccg atgtaataga agataagcgc cacaataata ataacgataa agtcaaatgg
    10981 atagtgaatc atatttaagc ctttaaattc tttgcttcct ataaatgaca gtattgatag
    11041 cacgattaaa tatacaataa tccataagct accaccaatt tgtttctttg tattacgcca
    11101 attcatacga tattcataga agaagtagat tggtaatcca agtataatga ttaaaataac
    11161 ttcagccgtt gttggccaca ttgcccaata tatagctaat gaagctaata caaatgataa
    11221 tggtgccatt acttttaaaa tttttgctct aaatggacga gtcattgttg gtcccatttt
    11281 tcttaatgca atcactgtcg ttgggccagt taaataggct actaaagttg cagtagaaat
    11341 aactgctgct agcgtacccc aatctctaaa taatgtaacc ataatcatac taatgatggc
    11401 attaaagatg attgctacac gtgggatatg atatttttca ttcatcttcc caagaaattt
    11461 agggatatgt ccatttttct ccattgctcg taaaactcga cctgtaacgg cgacaaatga
    11521 cacgccagta ccgaatggtg atacaaaagc ttcaatatat agtaaaattg cgagccaatt
    11581 aattcctaat aagatagcta aatcagcaaa tggtgaattg aagttgatgc cattccatcc
    11641 actatgttgt aacattgatt gaggcataga agtgataaac gtactttgta aaatgatgta
    11701 caacactgca ctgattgaca gtgagatagc gatgcctctt gcgatatttt tttcaggatt
    11761 tttaatttct gaacccatat taataattgt ctggaatgaa ttgaatgaaa aaataatccc
    11821 tgatgctgtt gttgcagcaa aaatcggtgc acttccgtaa ggcataaatg tgcttgccga
    11881 atggccgtaa tttgaagtgt cgaatcctga taacatcaac atgatgatgg ttaacatggg
    11941 tacgcctaat ttaaatacag aaattaaact cgtaaatgat gttaaaagtt ttacggacca
    12001 atagtttaat aatgaaaaaa taacaatgat gagatataca gctagcaatc cgtatgtgct
    12061 aatagagcca ttttccatta aatatctcat tggtttcgcc caatgccacg gccaagaact
    12121 catatattga acagctgaca cagcttcgat aggtattatt gtcaccaaag acacccaatt
    12181 cgcccaagca gcaataaagc ctaataatga gccatgtgta tactgggcat agttactcat
    12241 gccacctgat tgaggaaaca ttgtgccgat ttcaatgtag ttataggcaa tggttccaat
    12301 gactaggaat ccaagaaccc atgatatgat tgctgctggt ccagctattg atgatgcttc
    12361 ccacgcacca aatagccaac cagatcctat taatgaacct aaccctagta atactaattg
    12421 ggatagattg attttgtcgt tgtgcaattg cttgtcttta ttcataaata ctccttcgtt
    12481 attgccgaaa attcaaaaaa taatatgcga aaaattatac gcttattata ataatagtca
    12541 aatgcatttt ttgtaagaac gcaaaagcat ttgtaaaatt agttttttat aaaattagga
    12601 tatataatac aatgtgtatt gaaaaacaaa atggaagtga tgactatgag tgagaaacaa
    12661 tcaaatgaac aagttgaagc atttttaaat aaagagagtc aatggcaaga agaatataaa
    12721 tatttgagag cgttaatctt taatgaaaca gaattagagg aagcgtataa atggatgcat
    12781 ccttgttaca cgttgaataa taaaaatgta gtacttatcc atggcttcaa aaattatgtt
    12841 gcactattat ttcataaagg tgccattttg gaggataaat atcatacact cattcaacag
    12901 actgaaaagg tgcaagcagc tcgtcagtta cgatttgaaa atttaacaga gattcaagca
    12961 cgtagcgaag aaattaaata ttatctagcc gaagcaatta aagctgaaaa agctggtaaa
    13021 aaagttgaaa tgaagaaaac agaggaatat gttattccta aagagttaga agctaagttc
    13081 gaagaaatgc cacagctaga gtcgtcattt tataaattaa cgccaggcag acaacatcaa
    13141 tatatatatc atattgggca agctaaacgc agtgaaacaa gacaaaagcg tgttgaaaag
    13201 tatattaacc aaatactaga aggtaaaggg atgcatgata agtaattaat gagtaaaagc
    13261 ataccggtta tacaacaaca tacaagatga cacgaaacaa ccaatggctc atgctgttgg
    13321 ttgttttttt aggtgtgctg tcatgggcaa cactttgacg ttggaattcc gttacaggct
    13381 tgggagtagg aactgttagc aaaaggtaat ggtgtctaca atgaatgatg aagatattaa
    13441 aatataagga tgactttgtg ggtggcggat gggcttttgt ccgcctgtaa caatggatgc
    13501 gtgtgcatta ttacaaaaat tcgacttttg taataatatt tcacattttc gacacttttt
    13561 tgctataaaa caaccaattg agcgataata aattcgcttt taaaaaatat gagttatcta
    13621 tttagttgcc aaagataaaa taataatgtt taataacatc atatagagta tgttagtttt
    13681 aaatgtcgaa tatacgaatg tgcaaacaaa gtaatcggta gaaattcaac atacatagcg
    13741 ccgtttactg ttaagtattc acattacaga tgaaaaatat aaaattctac ataatcaaga
    13801 ccatgatgtg tacttgttta acttatgact ctatttgttt aacaattgcg atgatggtct
    13861 ttttatttta tgcgtatcat tcgtcatatt ttttatgagg aaggagaaat gattatgtta
    13921 agtattaagc atttaacaaa aatttattct ggtaataaaa aggcagtaga tgacatctct
    13981 ttagatattc aatctgggga atttatcgca tttattggaa ccagtggaag tggtaaaaca
    14041 actgctttaa gaatgataaa ccgtatgatt gaagcgacag aaggacaaat tgaaattgat
    14101 ggcaaagacg ttcggagtat gaatcctgtc gaattacgta gaaatattgg ctatgttatt
    14161 caacaaattg gcttaatgcc tcatatgacg attaaagaga atattgtgtt ggtacccaag
    14221 ttgttgaaat ggactaaaga agaaaaggat aaacgtgcaa aggaattaat taaacttgtg
    14281 gatttaccgg agtcattttt agagcgttat ccagcagaac tatcaggtgg gcaacaacaa
    14341 cgtatcggtg tcgtaagagc acttgcggcc gaacaagata ttattttaat ggatgaacct
    14401 tttggtgcat tggatcctat tacgagagat acgttacaag atttagttaa aacgttacaa
    14461 cgaaaattag gcaagacgtt tatctttgta acacatgata tggatgaagc gattaaatta
    14521 gcagacaaaa tttgtattat gtcagaaggt aaggtggtgc aatttgatac gccagacaat
    14581 attttaagac atcccgcaaa tgattttgta cgtgatttta taggacaaaa tagactgatt
    14641 caagaccgtc ccaatgacaa gactgtagaa ggtgtaatga ttaaaccaat cacgatacaa
    14701 gcagaagcaa cactgaatga cgccgttcat attatgagac aaaaacgtgt tgatactatt
    14761 tttgtagtag atagtaataa ccatttacta ggtttcttag acattgaaga tataaatcag
    14821 ggtatacgtg gacacaaaag tttacgagac accatgcaac aacatattta caccgttcaa
    14881 attgattcta aattacaaga ttctgtacgt acgattttaa aaagaaacgt taggaatgta
    14941 cctgtcgtag atgataagca acgtttagta ggactgatta cgcgtgccaa tgttgttgat
    15001 attgtatatg acacgatttg gggcgatagt gaggatgcag tgcaaacaga acatgtgggg
    15061 gaagacactg cgtcctcaaa aatgcatgag caacacacta ctaatgtcaa agtacgtgac
    15121 ataggagatg ataaatcatg atcgagttcc tacatgaaca tggtggacag ttgatgtcga
    15181 aaacactgga acatttctat atttctatag tggcattatt acttgccatc attgttgcag
    15241 tacctatagg cattttatta tcaaaaacaa agcgaactgc caatattata ttaactgtgg
    15301 caggtgtctt acaaacgatt ccaacactag ctgtacttgc tattatgata ccgatttttg
    15361 gtgttggtaa aacgcctgca attgtagcgc tatttattta tgtgttatta cctattttaa
    15421 ataacacggt actcggcgtt caaaatattg atagcaacat taaagaagct ggaaaaagta
    15481 tgggaatgac acaatttcaa ttgatgaagg atgttgaatt gccgttagca ttgccgctta
    15541 tcattggtgg cattcgtttg tcatctgtgt atgtaattag ttgggctaca cttgcaagtt
    15601 atgtaggtgc gggtggatta ggtgatttca ttttcaatgg tttaaattta tatgatccac
    15661 tgatgattgt aactgcaacg gtactcgtta ctgcactagc attaggtgtt gatgccttat
    15721 tagctttagt tgaaaaatgg gtagttccca aaggcttaaa agtatctgga taattaggag
    15781 gctaagataa tgaagaaaat taaatatata cttgtcgtgt ttgtcttatc gcttaccgta
    15841 ttatctggat gtagtttgcc cggactaggt agtaagagca cgaaaaatga tgtcaaaatt
    15901 acagcattat caacaagcga atcgcaaatt atttcacata tgttacggtt gttaatagag
    15961 catgatacac atggtaagat aaagccaaca ttagtaaata atttagggtc aagtacgatt
    16021 caacataatg ccttaattaa tggggatgct aatatatcag gtgttagata taatggcaca
    16081 gatttaacgg gagctttgaa ggaagcacca attaaagatc ctaagaaagc aatgatagcc
    16141 acacaacaag gatttaaaaa gaaatttgat caaacgtttt ttgattcgta tggttttgcg
    16201 aatacgtatg cattcatggt aacggaggaa actgctaaaa aatatcattt agagacagtt
    16261 tcagatttag caaagcatag taaagattta cgtttaggta tggatagttc atggatgaat
    16321 cgtaaaggcg atggctatga aggatttaaa aaagagtatg gtttcgactt tggtacagtg
    16381 agaccaatgc aaataggtct agtctacgac gcattaaact cagagaagtt agacgttgca
    16441 ttaggttatt ctacagatgg tcgaattgcg gcgtatgatt tgaaagtact taaagatgat
    16501 aaacaatttt tcccacctta tgctgcgagt gctgttgcaa caaatgaatt attacgccaa
    16561 cacccagaac ttaaaacgac gattaataag ttgacaggaa agatttcgac ttcagagatg
    16621 caacgcttga attatgaagc ggatggtaaa ggtaaagaac ctgctgtcgt cgcagaagaa
    16681 tttttgaaaa aacaccacta ttttgataaa cagaaaggtg gtcataagta atggaaggta
    16741 atttattaca gcaattattc aattattatg ttacgaactt tggttatcta tgggatttat
    16801 ttttcaaaca cttattaatg tctgtctatg gtgtgctgtt tgcagcttta attggtattc
    16861 cattgggaat cttgcttgca agatacacaa aactttctgg atttgtaatt acaattgcaa
    16921 atataattca aacagttcca gtcattgcaa tgttagctat tttaatgtta gtcatgggct
    16981 taggttcaga aacagtagtt ttaacagtgt ttttatatgc gttacttcca attataaaaa
    17041 acacttatac tggtatagct agtgttgatg cgaatattaa ggatgctggc aaaggtatgg
    17101 gaatgacacg caatcaagtg ctacgaatga ttgaattacc gttatctgtt tcggttatta
    17161 tcggtggcat tcgtattgcc ttggttgttg cgataggtgt tgttgccgtt ggatcattta
    17221 taggagcacc tacgcttggt gacattgtga ttcgtggtac aaatgcgacg gatggcacaa
    17281 cgtttatttt agcaggtgcg attccgattg ctatcattgc aatcgtcatt gatgtactat
    17341 taagattttt agaaaaacga ttagacccaa caacacgaca tcgtaaaaat caatctaatc
    17401 atcggccgca aagtattaat atgtaatagt agaagatgtt tattatttag cgatttcgtt
    17461 tcatgattta taaaaaatga ggctactcaa ggagctcaaa tagtctttga gtagccgttt
    17521 tataggttgt gtttgtatgc gtttacacta aaatagcaat tattatcatg aaagtttttg
    17581 gataaaaagc gttgattatt gtaaaaatac taaagaatga gatgttttat ttataatttt
    17641 ctgcaaattt atgatattgt ttcttaatat atcatattaa aaatttgttt ttcttaaaca
    17701 taggaggctt atctaattca tggacacatc aaaacaattt agaggtgaca accgattgct
    17761 tttgggtatc gttttagggg ttattacctt ttggttattc gcgcagtcac ttgttaatct
    17821 tgttgtccca ttacaatcaa catatagtag tgacgttgga acgataaata tcgctgttag
    17881 cttatctgcc ttatttgctg gtttgtttat cgtaggtgct ggtgatgttg ctgataaatt
    17941 tggtcgcgtc aaaattactt atgtaggatt gatattaaat gttataggtt cgttactcat
    18001 cattattaca cctttgccag catttttaat tataggtaga ataattcaag gtttgtctgc
    18061 agcatgtatt atgccatcca cacttgctat tattaacgaa tattatattg gtacaagacg
    18121 acaacgtgcc ttaagctatt ggtctattgg ttcttggggt ggtagtggta tttgtacgtt
    18181 gtttggtggc ttaatggcta catatatagg ttggcgttca atatttgttg tttcaattct
    18241 attaacttta ttagcaatgt acttaatcaa acatgcacct gagactaaag cagaaccaat
    18301 caaaggtatg aaagcagaag ctaaaaagtt tgacgttatc ggtttagtca ttttagtagt
    18361 gacaatgtta agtttaaatg taatcatcac acagacgtct cattttggtt tagtttcacc
    18421 gttaattcta ggtttaatta tagtgtttat ctgttcatta gttggttttg tatattacga
    18481 aaataaaata aagcatccac ttgttgattt ttcaattttt aaaaatagag gatacagtgg
    18541 tgcaactatt tcaaacttct tattaaatgg tgtagcaggt ggtgcactta tcgtcattaa
    18601 cacgtattat caacaacaat taggatttaa ttcttcgcaa acgggttata tttcattaac
    18661 gtatttaata gcagtgttgt caatgattcg tgtaggtgaa aagattttat ctcaacatgg
    18721 tccgaagcgc ccactattac taggaagtgg ctttacagtg attgggttaa tcttattgtc
    18781 gttaacattt ttaccagaaa tgtggtatat cgtatctagt atagttggat atttattgtt
    18841 tggtactggt ttaggattat atgctacacc atcaactgat acagcagttg caagtgcgcc
    18901 agatgataag tcgggtgttg cttcaggtgt atataaaatg gcgtcatcat taggaaatgc
    18961 atttggagta gcagtatctg gtacggttta tactgtgtta gcagctaatt taaatttgaa
    19021 cttaggtggt ttcacaggta tgatgtttaa tgccttgcta gcaattgttg catttttagt
    19081 cattttacta ttagttccta aaaatcaaac gaatttgtaa aaccgaaatg aaagcaagtt
    19141 attatgtagg gattttaaag gaaattttgt gaaagtaagt ttatcataca cacttaatgt
    19201 tgcgtattga cgtttaatgt taggtgtgtt cttttataga cgataaaagc tgtgtgcata
    19261 ttaagcgaat gattttcaaa ttgacgctaa tatgcgaaag tagtattttt aaaatgaaca
    19321 acaacgatga agaggggttt ataggatgaa aattgcaatt gctggatcgg gtgcattagg
    19381 aagtggcttt ggtgccaaac tatttcaagc aggatataat gtcacactta ttgacggata
    19441 tacatctcat gttgaagcgg ttaagcaaca tggattaaat ataacgatta atggagaggc
    19501 attcgagtta aacattccga tgtatcattt taatgatcaa ccggacgaga gcatttacga
    19561 tgttgtcttt ctatttccaa agtctatgca attaaaagaa gtgatggaag ctatgaaatc
    19621 acatattgat aatgaaacga ttgtcgtatg tacgatgaat ggtttgaagc atgaagaagt
    19681 cattgcgcag tacgttgctc aatcacaaat tgtcagaggt gttacgactt ggacggcagg
    19741 tcttgaaagc cctggacaca gtcatttact tggtagtgga ccagttgaaa taggtgaact
    19801 agttgatgaa ggtaaagaaa atgttataaa agttgctgag ttacttaacg aagcggaatt
    19861 gaatggtgtc attagtaaag atttatacca atcgatttgg aaaaagattt gtgttaatgg
    19921 tacggcaaat gcattaagca cagtgttgga gtgtaatatg gcatcactga atgaaagtag
    19981 ttatgcgaag tgtttgattt ataaattaac gcaagaaata gtgcatgtag cgacgattga
    20041 taatgttcat ttaaatgttg atgaagtctt tgaatattta gttgatttaa atgaaaaagt
    20101 tggtgcgcat tatccatcca tgtatcaaga tttaattgtt aataatagaa aaactgaaat
    20161 tgattatatt aatggcgcag ttgcaacatt aggtaaaaaa cgtcatattg aagcgccagt
    20221 caatcgcttt attactgatt taattcatac taaagaaagt cagcgacacg cacaggatta
    20281 attagtgttt ttagctatga ttgcaaggaa atgacaatca cgtgataatt acggtcatta
    20341 ctaagattga aatgtaataa ataaagaaca gcagtaaggt actttcaaat tgaaatgatc
    20401 gtggtgctgt ttttcttgat tgatcttcgt cataattcag atttgtcata ggtctacgac
    20461 atactattag tatttactag acagttttta cgacgacact ttgaaaaatt ttgaggcaaa
    20521 tcatttggaa gtctcacgtg aattttgtaa actcatcaag caagtaatta tattaaaaag
    20581 acaaatagag aaaaggtgtt tataatgagt aaaatttttg taactggtgc aacgggcctt
    20641 attggcatta aattagttca aagactaaaa gaagaggggc atgaggttgc tggttttact
    20701 acatctgaga atggtcaaca aaagctagct gctgttaatg taaaagcata tattggtgat
    20761 atattaaaag ctgataccat tgatcaagcg ttagcagatt ttaaaccaga aatcattatc
    20821 aaccaaatta cggatttaaa aaatgttgat atggcagcaa atacgaaagt acgtattgaa
    20881 ggttctaaaa acttaattga ttcggcgaaa aagcatgacg ttaagaaagt gattgcccaa
    20941 agtattgcct ttatgtatga acctggcgaa ggattagcaa atgaggaaac ttcacttgat
    21001 tttaactcaa ctggtgatag aaaagtaacg gttgatggtg tggttggtct agaagaagaa
    21061 acggctcgta tggatgaata cgttgtctta cgttttggct ggttatatgg cccaggtact
    21121 tggtacggaa aagatggcat gatttataat caatttatgg atggtgaagt gacactttca
    21181 gatggcgtaa catcatttgt gcatcttgat gatgcagttg aaacatctat tcaagctatt
    21241 cattttgaaa atggtatcta taatgtagca gatgatgcac ctgttaaagg ttctgaattt
    21301 gcagaatggt ataaagaaca acttggtgtt gaaccaaata ttgatataca acctgcgcaa
    21361 ccatttgaac gtggcgtaag caatgagaag tttaaagcgc aaggtggtac tctgatttat
    21421 aaaacttgga aagatggcat gaatccaatt aaataataat ttatccgttt aatatacaaa
    21481 gaataaagac ttggtcgaat cgtggatgat atattatcaa acgcacggct cgaacaagtc
    21541 tttttattat gtcttcgtta tctttgtatg aaggaataac agaattacaa ttaatgtact
    21601 gaataatgca attaatattg tgattagtgc taatttaatt tctattggca gccaagtcag
    21661 tacaaaagac cagttattgc taccgagaat gagatatggt aatgcatata atatgagcgc
    21721 tatagcgata cataaacata aagttagcca acttgaaaat gtggtaagtt ttgatttgcg
    21781 caggatgatt ttcccgtgac gcatttgcca agcacgataa gctgagaata taaatgctaa
    21841 taaaataagt gttgtcatca aaacggtaac aatattaaat tgatttttat attgattgag
    21901 catagacgca actgtcgaat atcgcttgtg atttacaatt tgtgtgttaa gatgctcaac
    21961 taatttgggt acatattccg aatttagatt tgcaagcaca acaattccat aattttgttt
    22021 tggatttagt aaaataaatg atgaaaagtt atcgagcgtt cctgaatgaa acactaaatg
    22081 ttcatcatta ttggtaaacc agccggaagc atatgcattg gcattaggtt caccaattgt
    22141 tgatgataaa tttttatgtg attgttgaac taatgatttg tatttatcag gtggattaag
    22201 ttggaatttt atccaatgtt ccaaatcttc agttgatgtc atcatatatg ctgatggtgt
    22261 atcccaaagg ttaaattcag gtttagagac gacaggtgtc gaaccttgta attcgtagcc
    22321 aatagcatca tgttttgttt tgttattggt ttgtttgaat gatgtatgtg tcatattcaa
    22381 aggcttgagc catgaatttg taatatattt tgtataggat tgcttcgtaa cgttttggat
    22441 aattaaacct aataaatcat agttcatatt tgagtattca aattcttctc cgggcttatg
    22501 atgtaattca tcacccataa ttgcacgggt tacatcattt aaacgattat ttttatttgt
    22561 tacggagtct tcgcttgtaa tatcactagg tataccactt gtttgagcca aaagttgctt
    22621 aatcgtaata gtttcatttt gaccattata gttcatttta aaatgaggca catgtttaga
    22681 tacggcatca tttaagttta atcgaccttc ttgagctaat tttaaaattg caagacctgt
    22741 gaaagctttc gtattagaag caatttcata ctttgttgtg ggagaagctt tgactttttt
    22801 atcaacatct tgataaccat aacctttatt taaaaaaact ttgccatttt ttactattaa
    22861 aattgatgct ccaggaatgt gtcccttttg tagatcatgc tcgataattg tatctatttg
    22921 ttgttgcgaa tcattggtta accgtgtctt cgtattgcta tttaatgtta tatatatagc
    22981 aattgaaatg gcgactaaaa tgataataga aatggataga aaatatagtt ttttagtagt
    23041 cataaacgtt cctttttata tgttaaattt acttaagtgc ctaatgagat ttattttatt
    23101 ataccagttc tattgaataa attaattaaa gaggtatatt taccattatt tttgacacct
    23161 tatatgttaa taggtgtata attacataaa aaatattaat taactctcta tacttttcgg
    23221 aaagataggc gtatagtgat atccatcaaa aagtataaaa aggaatagga gattatgttc
    23281 aatcaattta aaagacttat tatagggcaa cctaaaaaaa acagagaact aaaagacgaa
    23341 aagatatcga agtttaaagg gttagcgatt ctttcgtctg atgcattatc ttcagtggct
    23401 tacggtcccg aacaaatact gattacatta tcagtagtgg gtgcagttgc aacttggtat
    23461 actttaccga ttgcaggtgc tgttctgatc ttattagctg ctttaattat gtcttatagg
    23521 caaattattt atgcatatcc taaaggtggc ggcgcttata tggtgtccaa gaccaattta
    23581 ggagaaaaat ggggattgct tgcaggaggc tcattattag tcgattacat actgactgtc
    23641 gctgttagta tatcatctgg tgctgatgca tttgttgctg cattcccaag tttatatggg
    23701 cataaagtac tgattgcatg tttacttgta ctttttattt taatattaaa tttacgtggt
    23761 ttaactgaat ctgccaccgt attatcctat ccagtatatc ttttcattat agggttagtg
    23821 atattaatat ttataggtac tttccgtgtg gcgacaggag atattcaacc acatatgcat
    23881 gcatcagtag gaactgcggt tcctggagta acattattct tgctattaaa agcattttca
    23941 tcaggggctt catcattaac aggtgttgaa gctatttcaa atgcggtaac caattttaga
    24001 gaaccaagtg ctaataatgc tgtaaaaacg ttaattgcta tgggttcaat tttagcgttt
    24061 ttattagttg gtatcgttgg tttagcatat gtttatggga ttatgccaca aacggaaacg
    24121 acagttttat cacaattagc tatgcaaata tttggtgata atgctgcctt ctattttgta
    24181 caggcaacga ctgtgatgat tttggtatta gcagccaaca ctggatttac agcttttccg
    24241 atgttagcgg cttcaatgtc taaagataaa tatatgccta gaatgtttac tgttagaggt
    24301 gatcgcttag gctactctaa ctcaattatt attttaggtg tattagccat cattttaatt
    24361 attgtatttg atggtatgac tgaagattta attccattgt atgctgttgg tgtatttatt
    24421 ccatttacac tagcacaatt cggtatggtt attaaatgga ttcatgaacg tcctaagaat
    24481 tggttgagta agttgtctgt gaacttactt ggtggtatcg tgacatttat tgtttttatg
    24541 attttactca taactaaatt tagccaagta tggccgatac ttattttctt gccgttcgtg
    24601 gtgattttct tcttgaaaat taacaaacat tatcgagata tcgcagaaca attacgttct
    24661 gacattgatg ttcttaatgt ggacgtggta gatcgtaatt tagcaattgt gccgataaca
    24721 agtattacaa cagcagttga taagtctatt tattacgcac aaatgcttgc gaataatgat
    24781 gtcattgcgg tacatgtatc atttggagat gaagatgaaa aagcattcca agagaaatgg
    24841 aaacgtcatt tcccagatgt aagattagtt attttacact cggaatatcg cagtattata
    24901 cgaccaattt cacgttttat cgataagatt aatcgtaaag ccaacgatca aaactatatg
    24961 attacagtag tgataccaga atttattact aagaaacgtt ggcataattt attacacaat
    25021 caaactagtt tgcgtatgaa attgtattta atttatcaaa agaatgttaa cgtatgtaca
    25081 attccattta aacttaaaaa atagattcta taatcaaatc ggattgatga aaggttattt
    25141 acttttcgtc aatccgattt tttgatgttg aatataaaca ccccgtacat atgagatgat
    25201 aatgactttg tctcatatgt acgggggtgt tgttatgtct tgcttaatgt ttggactgta
    25261 aagacaagac aatttcgttg taattgatat tttctcgaat ttgagctgca acgatattgt
    25321 tgattttgtt tttgcgaatt aattcatcta aaagatgacg ttgtaagtac aatgcttcca
    25381 atttgtggtt atggaacata gcttgcggta tgatttgatt gctgttttct tgaagttctt
    25441 ttcgacgttg tgcacgccac tttaatgagc gactcatatc atagtaatga ttaatgacta
    25501 aactaacctc aagtacattt gtactatttt gttcttcttt taagcgtaaa ataatattgt
    25561 gattcacaat acgcataatt ttttgaacat ctttgaatga attttcaaat tcttgcttct
    25621 tagattcttt gtttaaggct ttgtagtgct tcatcgcttt aagtctaagc cataacatct
    25681 tgaagaagtt tgcaaatttt tcaacaaatg aagcagtacg gtgtgtctct gttaattcga
    25741 caatattgcg gtaattattt atatcttgat atgttgcctt acctttatca attaaacgct
    25801 caagtgtaga tgtttcgatt acttttgcaa tatcttctaa acgtttgagt tcttttgtat
    25861 tttgattatc aggttctgaa tttaataaaa ataacaattc tccatagtat tggtttaata
    25921 ctgggcgata atttgtatcg tttttgtctt ttttactttc gtttttaaaa tgttcgataa
    25981 ctttttggac aatgaaaatt ttggcagatt gataagtcat acctttaaaa gtagtatctt
    26041 cggcagatgg tgtaattaaa ggtaaaacaa tttgcgctaa aattaaacta attaatacca
    26101 tgaatgatgc aataaacaat agatcattac ggtattcaaa agcttgccct tgtgtaataa
    26161 taaacggcaa tgttaaggcc atagataacg aaatggtccc gtgtatgcca cacatcgtca
    26221 tgataaaagc gtaacgtaca cgagaaggtg gtgtttcatg tgaatcatgt tcctcatcta
    26281 ggtatgattg gatatttttc gggaaataaa aatctttata ccaaaaataa acccagataa
    26341 aacggcaggc gtaaattgct atagcgatta atatagtaat cactattaaa aatgaaaagt
    26401 tgtccggctc tgtttggaaa atatctatga ctacagtagg aatcataaaa cctaatacaa
    26461 caaatacaaa accatttaag gcataactaa atgtgttcca aatttgatgg taattcattt
    26521 gtagttccgt ttgtgctcta attaaacggt cgcgttctaa accatggatt agacctgcga
    26581 ttacaactgc aatgatacct gaagcatgaa cttcttctgc taaaaagtat acgacaaaag
    26641 gtgttaataa ttgaataaaa gttaaggtat tgttatcttt taaaccttta ttagcggtta
    26701 agtctatacg tattctaacg ataacgaatc caataattgc accaataagt acacctagta
    26761 ttgttgaaat gataaattgt tcaacagctt ggaataatga aaaggtacca gttactaatg
    26821 cagtaacagc aattttaaat gaaatgatac ctgctgcatc attgagtaaa gattcacctt
    26881 ctaaaatcgt catagaacct ttaggtaata attttccgcg tgtaatagca gatactgcta
    26941 ctgcatcagt aggacataaa attgctgcta ttgcaaaagc ggctggcatt ggtaaggcag
    27001 gccaaatcca atgtataaaa tagccaacac cgactacagt tgcaaatact agtgccattg
    27061 acattaatag tataggttta cgatattcta gtaattttgt tcgagagacg tgggtacctt
    27121 ccacaaaaag tagtggcgcg ataacggcaa acataaatac ttcagaattg aattggaaat
    27181 caacttgtat aggaataatg aaaataacga cacctaatgc aatttgaata aaggcagtag
    27241 gaatttgtgg gaatcgatta ttgataaccg aactaataat cacagcaaaa ataaaaatta
    27301 aaaatgcttc taatagtgcc atacaatact cctcaaaatt ttaatagtta atattttatc
    27361 acttttaagg cataatgaca tagatatatt gataaaatga agttattttc aaaaaaactc
    27421 tagtatcggt tgaactgata ctagagcgag atgtttaaat tattgattgt catatctgaa
    27481 atgaccgctg tcattttgtc gttgttcata cgcgagcttt tcagcattcg ttttgtattt
    27541 tttataaaag aaaaataaaa atataaacca gaatggcgaa atataaatag ctgctcttgt
    27601 ttcgtcacta aagaataata aaatgaatac aaagaagaag aacgctagaa taatgtaagc
    27661 aataggctta ccaccaatca acttaaattt actgttttta tgtgcctcag gatgcttttt
    27721 caaatacatt agataagcga caataatcat tgcccaaaca actaaaaaca acacagttga
    27781 taacgttgta acgtatatga atagttgaat tgcattaggg aaaatgtagt ttaacaaagc
    27841 tgctataagt aatgcaattg atgaaactaa cattgataaa taaggcacgc catgactatt
    27901 cgttttattt aaaactttag gacctaaccc ttgttgtgac agtccgaata agatacgact
    27961 attcgaatag ataccactat ttgtagcaga ggccgcggca gttagcacga caaagttaac
    28021 gacacctgct gcaaatggca cgccgattaa tgtaaagagt ttaacgaaag ggctactatt
    28081 tggatcgata tcattccaag gtatgactga cataattact aatagaccac cgatatagaa
    28141 taataaaata cggataggta cattattaat tgctttcggt aaggtttttt caggatcttt
    28201 cgtttcacca gcagttacac ctataagttc aataccaatg aatgaatata cagcaatttg
    28261 gaatgacatt aagaaaccaa atgttccacc agggaacatg ccaccgtgac tgattaagtt
    28321 tgtgaatgat gcatgtccat aatgtgtttt aaatgagaaa aagattaata caagaccaac
    28381 gataaccatc gcaataattg tgacaacttt aataatagag aaccaaaact ccagttcacc
    28441 aaataatctg gcacctaata agttgaagct aatcaagatt aaaacaataa atagcacggt
    28501 aatccaattt gggacttgtg gataccaaaa tgcaaagtat tgtcccatcg cagttaggtc
    28561 tgacatactt gatacaatcc aacataacca gtaagtccag ccaatgacaa agccaccaaa
    28621 agggcctaaa tattcatttg caatatcaac aaatgaatta aatcttgtat tgctcaacaa
    28681 caattcgcct aatgcgcgca taaaagcgaa tagtacaacc ccaataatca tgtatgtgaa
    28741 taacagtgat ggaccagtta aagatattgt ttgacctgat cctaggaata acccagttcc
    28801 aattgcgccc ccaattgcta tcaattggat atgtctgtta ttcaactctc tattcaattt
    28861 tcttgccata attttcctcc tcaggataaa gcaaataaaa aagttgtgtg taagcgtttt
    28921 cttaattata aatactaaag aaatccattt aataaagcaa ttattttttt aaatataaga
    28981 aaaaacattt gataggtaag ggtatgataa ctaaaactta tcgatttttt gaaaagatat
    29041 aagtttttat gcaaaaatat aaaataatca tctaaatgaa gcagttaact atatatatta
    29101 gataagctat ggcataataa ataacatttt aatttgagta aagaaggtat gggtatgaag
    29161 atagggacaa tcgccgattt acatattgat cgtcataata aaaaaacatc cgaagattac
    29221 ttagaggcat tggttgaaat agttaagtat aagaaattgg atatattgtt gattgcgggg
    29281 gatatctcaa atcattatca attgacgcac caatttataa cgcaattgac aaaacaatta
    29341 gatatacctg tgaaatttgt acctggaaac catgatttat gggaagttga aagtatgact
    29401 acgcaagaca tttggaataa ttataagagg atgtcacagt gcttggtagg aaaaccattt
    29461 atagtaaatg aagaatgggc aatcatagga catactggtt ggtatgatta tagctttgca
    29521 gcacaacgat tttcattaga tgagttacaa aaagtaaaac attatggtgc gacttggcaa
    29581 gataaagaac gaatatcttg gggcatatca gatcaaaatt tatctaaaat agcggttgaa
    29641 caagtgaaga aagatatatt agaagtagga aatagacgag tgattttagt cacacatgtt
    29701 gtgacgcacc ctgatttcat tgttcctatg ccacatcgta tattcgattt ttataatgca
    29761 tttattggga caagtgattt caatcctttg tatgcgatgt tcgatatacc atatagtatt
    29821 atgggccatg ttcattttcg taaaagtgtg atggatgatg gcagatgtta tctctgtccg
    29881 tgtctaggct atccaagaca atggcgttca gaagatattt accaggaaat aaatgagacg
    29941 atacaaataa tagaaattta aaatgcgcaa acctgaccca gtttgcgcat tttatgtttt
    30001 acacacgcga gtaatgtgtt tacttacgtg tgtttatttt gttgttgatt ttcaattgta
    30061 tatgaatgtg gttgcacata aatgcacttt cttcctggtg aattaaagct atattccatt
    30121 ttctctttac gaattttaat aatttgtttg cgatttggaa tgatggcagg taaaactagg
    30181 ccacgacgaa tatgactcca aagtggatcg atataatagt aataataatc atcgtaccca
    30241 atgagtaacg ttacgtgaat atttgaaact tgtttcgctg gcttgttatc aaagcggaaa
    30301 acacgtagta atggtttaga accaagatta gtatggtata ttaacacagg ttgaccttga
    30361 tcgataatac ctttaagatc ttctaaggat ttaccagtgc cgtctacgat attaggattg
    30421 tatttttgta aaaatggtac atatgcttct ggaaatatcg tttgatgata attgccaagc
    30481 ttaatgaata agtgatgtcc aacataacct ttatgtggat tgttcggatg tgtcggccaa
    30541 tgtctcataa tttctgtagc agggatatgt tggttattgt attgcaacat catggctgcg
    30601 gaaacacctt cacaccccat gaccataggg ataggaaata gctgactgat aggtttaact
    30661 ggtaatattt ttcggttcat aatatagtcc tcgcattgat tcaataaata tttaatataa
    30721 ttatatagcg tcaatgcaaa atgtcctaaa catatgtttt acatgagtga ataaaattaa
    30781 tggagtgata aaatggaata tcaattacaa caacttgcgt cgttaacgtt agtaggtatt
    30841 aaagaaacgt atgaaaatgg acgacaggct cagcaacata tagcagggtt ttggcaaaga
    30901 tgttatcaag agggagtaat tgcggattta cagttaaaaa ataatgttga tttagtcggg
    30961 atacttggct tatgtatacc tgaattagac ggtaagatgt catatatgat tgcagttacc
    31021 ggagataata gtgctgatat tgaaaaatat gatgtcataa cattagcaag ttcaaagtat
    31081 atggtatttg aagcacaggg agcagtacct aaagcagttc aacaaaaaat ggaagaggtt
    31141 catcactaca tacatcaata tcaagcagat acggtaaaat cagcaccatt ttttgagttg
    31201 tatcaggatg gtgatactac aagtgaaaaa tatattacag aaatttggat gcctgttaaa
    31261 gggtgattga atagaaatgt acttgatatg aaggcgtaat tttagttgaa gattggatct
    31321 cataattcat aaagaagaac cctgacaaag atagatatct ttgctagggt tctaattatg
    31381 ttgaagtgtt atgcgacatg ttgcttttta atcattttaa agtaaatgat ttgtagactg
    31441 actaatagaa tggctgtaat gaagataata atcatatatg gtgatgtatt aaattcgcct
    31501 tttaagccaa ctaatggtgc aacagtgcca cctaagataa attggaataa gccaagtaaa
    31561 cttgatgcgt taccactgcc acctgttcgt tcttccatag ccattgtgaa accaagcggt
    31621 ccaattgacg tcacaggaca cacatttaag aagaatgcga tgagtaagac ccaaagtggt
    31681 aaatggaatg taagtgtcag gataattaaa gcaacaccta ccacttgtat aatagttaaa
    31741 atgattaata atatgtggcg atgtaatttt tctactaata aagcaacgac ttgactgaca
    31801 atgattaaac ctacaccgtt aacagcaaac atgatactaa attgttgggg tgtcatatta
    31861 tacaattttt gagtaataaa tggcgatgca gatgaataac taaatagcat tacataagtt
    31921 aaaccttgta atagcattgg aataataaat gctggttttt tcaaaagact tccaaaatct
    31981 ttaatgacgc tactaaaatt cacctgcttt aattcttctt taggtgtttt aggtaattga
    32041 gaagcgacgc caattaaaat gataagtgcc acaatcgtta aaattgtgaa aatagcacgc
    32101 caagttgcta cggataaagc taatccaccg gctaatggtg caagaatagt gataatacca
    32161 ttaactacca ttaaagatgc taaaaattta gcgagtgcgt tgccactaaa tttatcacca
    32221 gcagaggctt tggcaataac gatgacgcca ccaccagtta aaccttgaat taaacgtaaa
    32281 gttaaaaata gaggtaattg ggtaacgaac acagataatc cggatgccaa gatgaaagtg
    32341 attaagatcg atacagcaat acgtttacga ccaaaggcat cggataaagg tccgaagata
    32401 aattgaccaa gtgcaagacc aatcattgtg aatgataagg ttaattgaat ttctgatgtt
    32461 gtcgaaccaa aatcaccttg cactttaggt aatgatggta cgtacatatc tatagttaga
    32521 gggccaaaag ctgtcatgac acctaacgtg attaacaata aaaatgaaaa ttgcttcgtt
    32581 ttggaactcg aagattgcat aaacagactc cttaatttat ataattatgt aaattatata
    32641 cgttttatgt gcatttgtat gtagttagaa tataagttta tataaaaagt cctatactcg
    32701 caatgtatca tcattaataa cgtagtgata cagataaagt ataggactta atgtttatca
    32761 tcaaagcagg tgtaataatt aattagcgcc accattgtca tctttaaata agctttctaa
    32821 tttagattta atactgtcga attttgtatt aatatcattt aacatgcttt caattttacc
    32881 ttggcttgca ttgtttttaa gtgcattatt tgcctctgtc aatttgttga tttggtcttg
    32941 ataaaattga gttagcttag aatcagcttt gttttgttct tgctgcttca agttgtcgat
    33001 ttgattttgt aaatttttaa taatgtcatc agttttttgg ttgtttttaa tattttcttt
    33061 agcattgtcg acttgctggt taatttggcc gtcttgattt tcaacttgtt ttttataatt
    33121 ttgagagact ttagggtcat tactaacttt atcgctatca ttgttaagta aggcgcgtgt
    33181 gacaaaaata gcgacaataa ttaagagaat agcaataatg atatataacc atttttttga
    33241 acggcgggat ttctcgtttt cttcttcaag aatttgttct cttcgataat ctctaccatt
    33301 atagtatcgt tccgggtgtt cttcaggatc gcctttagca tattgttgtc tatacgatgc
    33361 gtcttcagat tgacgacgat gattttgatt ttgattgtcg tattgatatg aatcacggta
    33421 tttatcagtt cttttcatgg gtttcacctc attcaagttt taactgcaaa taataaagct
    33481 gatgatttac tttgacatta ttgtaatttc agaatacgag caatgtcagt tgcagtgttt
    33541 aataaatttt gttcgctatt ttgtaggaca tcttctaaag tgctaggtga agagattata
    33601 gaataggcac tatcaatacc gaaatcgtaa acatgttgat aattttcgcc tagacttcca
    33661 caaatcgcga tgacaggaat atgatattgt tttgcagcta acgcaacgcc tacgggtgtt
    33721 ttaccaaaga tggtctgata atccatgcgt ccttccccag taataacgag gtctgcatct
    33781 ttaattcttt gatgaaaatc tgtaatgtca aagacgacat caataccttt tgttaaagtt
    33841 gtctcacaaa acgctaataa tgctgcgccc ataccgccag ctgcaccaga acctggtatt
    33901 tgattaacgg actttcctgt gcacattttt atcttatcat gataatgcga cattgcgaaa
    33961 tccaactttg gtatcatctt tgcatcagcg cctttttgag gaccataaat ataggtagca
    34021 ccattttcac ccaataaagg atttgaaaca tcacaggcca ctttaaaggt cacctctttt
    34081 aatcgcgaat ctagattggt tatatcgatt tgtgcaatgt gagcaagatt agcaccattc
    34141 atttgtaata agtccccgtt tacatcagta aactttacgc ctagtgcact tagcatacct
    34201 gtaccaccat catttgttgc actgccacca atccctaaaa taatggtctt agcaccatga
    34261 tttaatgcat ctttaattag ttcaccggta ccatatgatg atgtgtataa aggattacgt
    34321 tcctcttttt ctaataaatc caaacctgac gctgccgcca tttcaataat tgcaatttgt
    34381 tgttcgtctg cgcgtgcata acatgcttca ataggtcgca ttaaagggtc attaacgatg
    34441 actgtatact tagtggcacc tgttgcatgc attaaagcat ctgtggtacc ttcaccacca
    34501 tcagccatcg gaatgatatc ataatgaagg gtattcccat aaacattagt aaatgcctgc
    34561 tttataatat tgccaacttg ctgtgcggtc atactttcct taaatgagtc aggagcgatg
    34621 acaatttttt gtaattgcat agtagacatc ctctcattac tgttgtcgct cttattgtat
    34681 ataaaattac tagtgaacta aagtaatctc tatagtgcta atgagtcgcg cgataaatta
    34741 gttacattat aatggcgtat aaggatgagg ggaaagagac taaatttgct gtgaaagggt
    34801 ataaaaattg aagtaagtat atttgaagag aagcggattg gctcgcatat tcgagtatgt
    34861 tggagaacgt agttatacat atattttgat gttgaggagt tacacatatg aaactaacac
    34921 aaacgcatgc tgaaatttta aaatttatca ttgttggcgg cattaatacg ttaaattatt
    34981 atgttgtcta tttattgctg ttaaaattat tacacattga atatatgatt agtcatatta
    35041 ccggatttat agtcgctttt gtgatttcat attatttgaa ttgttatttt gtctacagag
    35101 taaaacctac ttggagaaaa ttcattagtt ttccaattac gcagcttgtc aacgtaagct
    35161 tacaaacagt tttattatat gtttttgtat cctggctaaa tttgccagcg gaaattgcgc
    35221 catttgcagg tttagtgatt acgataccca tcacatttat attatctaaa tggattttaa
    35281 aagatagtaa ttaaagtagc gtaaaccact aaagaatact ttgctcaggc gttaatattg
    35341 cgtgaaatat aataaataaa tgatataata taatgatcgc ctaacatctc gggcgttact
    35401 ttaacgcaga gaggaggtgt atgacggatg ttcaatttat taattgacat catgacttca
    35461 gctttaagcg gctgtcttgt tgcgtttttt gcacattggt tacgaacgcg caacaataaa
    35521 aaaggtgaca aataaccaac acctaaataa atcccctcac tatggcagta gtgaggggat
    35581 ttggtgtatt tagatgttca atttattatg taactaatta tagcattgat gaacaaggtg
    35641 tgcaatgtat tttttgcaat attacaataa atgaatttaa ttattttaga attaagtatt
    35701 tcgaaaaatg atttaatagt tgagtcatag gatcattaga taaagcgaat aatcaattat
    35761 agggacattg ggatacaaat caatgtacta gactctacaa ggctatactc agggacccaa
    35821 catagagaaa ttggatccac agtttctaca gacaatgcaa gttggcgggc ccccaacaca
    35881 gtagctggcg gaaagtcagc ttacaataat gtgcaagttg gcgggccccc aacacagtag
    35941 ctggcggaaa gtcagcttac aataatgtgc aagttggcgg agccccaaca tagagtttta
    36001 ctcatgtatt cctattttta agtacatatt agctgtggct aaggataaag aatcattaca
    36061 taataaatca ttagtggctc tttatcattt ctgccccata accttgtgaa tttttaaaag
    36121 aaatgtgtca caaatccacg cgacattgat aatcgttatc aactaatata tgatgtactt
    36181 gtaataagta ttaattttta acaaataaca aatttatatt ttatcatcat tcaatgaaat
    36241 aaataatata agtggcttaa tttagcttat aaattgaaag gagttacata tacgatgaac
    36301 aatcagacaa attggataaa gatactcagc ggatttgctt ctgatagtaa atggaaaatt
    36361 atgttatcaa ttttgttgtc tatcatcagt gtcttttctg gattagttcc atattgggca
    36421 gtctttaaaa ttattttaat gatgattaac aatgcatata cgattaattc gattatggtt
    36481 tatatcttta ttgctttaat cgcttatatt tcacaagtgt gttgttttgg agcgtcaacg
    36541 atgctatcac atattacggc atatgaaatt ttatctgaaa ttcgtaaaaa attagctcaa
    36601 aaattaatgc gtctcccttt aggcatagtg gaatctaaga aaataggtga attaaaaaat
    36661 atatttgtcg ataaggttga aacaatagaa ttacctttag cacatatgat tcctgaagtt
    36721 ataggaaact tacttttgtc agctactatc tttttataca taatgctcat tgattggcgt
    36781 atggctagtg ccttattagt aacgatacca atttcaattt tcgcttttaa aaaagttatg
    36841 tctggattta atgagacata tgctgaacaa atgaaatcga ataattatat gaatagcgcg
    36901 attgtagagt ttatcgaagg cattgaagtg attaaaacat ttaatcaatc tcaaagttca
    36961 tataaaaaat ataaagatgc agtagataat tataagattc acactttgaa ttggtttaaa
    37021 aatacatggg ggtatatgaa tttaggagct agtgtattac cttcaacatt tttagggatt
    37081 ttaccggtcg gcatgtattt gatatctatc aaccaattaa actatgcgga atttttccta
    37141 tgcatcgtat tatctttagg tgtagtagcg ccgattaaga attttactaa ttatgtaaat
    37201 catttaaagt ctatacaata cgcattaact gaagtgaatc aaatattaag tctagaagag
    37261 ttagtattgt caacaaaatt taagaagcct caacattatg aaattgcttt taataatgtt
    37321 ggattttcat ataacaaaga taaggacgat ctggtcttta agcatttatc atttacagta
    37381 ccagaaaata atttcacagc aatcgtcggg gcatctggta gcggtaagtc aaccattgcc
    37441 aagcttatat cacgatactg ggatgtgact tcaggtgaaa ttacgattgg cggtataaat
    37501 ataaaagata ttgaatcgaa acaacttaac gatttagttg gttttgttgg acaagataac
    37561 tttttattaa atcttacttt taaagaaaat attaaacttg gcaatccaga agctacggat
    37621 gaggcagttg aaaaagctgc caagttagca caatgtcatg aatttatcaa aaagttacca
    37681 gatggatatg atacgaatgt tggtacagtg ggagatgaat tgtctggtgg tgaaaaacaa
    37741 cgagtcacta ttgcaagaat gatattaaaa gatgcgccta tcattgtatt agatgaagcg
    37801 actgcttacg ttgatccaga caatgaacaa aaaattcaag aagcattaaa tgtgttgacg
    37861 caggataaaa cattgattgt tattgcacat cggttatcta cgattcaaca tgcagatcaa
    37921 attattgttt taggtaaaca acaaatttta gaaaaagggt cacatcactt attgctaaaa
    37981 ttaaacggta attataagaa aatgtgggat acgcacatgc atacaaaaga ttggggaatc
    38041 aatactggac ataattaaac taatgagaaa aggaggtcaa atatgtttca aattacattt
    38101 aaaattttaa actggataag accatataaa gcaagaatga ttttaggatt tagcatgtca
    38161 tttttaaatg ctatttttat tgcgttacct atctttttag ctgcaaaaat atttaataat
    38221 gtgctatctc ataaacctat ttatatgaaa gatatattga atgttgtaat tatcatggtt
    38281 ttattagtga ttggacgatt tattacagca tatttcaaaa gcaaaagcca tgagagcatc
    38341 gcttatgaaa tgagtgcgaa agaacgttta gatatagggg ataaattgaa aaatgtaagg
    38401 ttaggttatt ttaattcgca tcattcaaat gagttaacaa caatagtaac aacagattta
    38461 acctttttag aaaactttgc tatgaaaatg gtggacgttg ttgttaatgg atacatatta
    38521 attacagtac tcatattgtc tctacttgta gtttcgtggc aagtatcatt attagcatgc
    38581 attggcgtat tactatcatt tttagctatt caattattag aaagaaagag tcgacaaaat
    38641 gcgccagcgt atcataatgt acaaaaccaa ttagtggaaa aggtattgga ggttattcgt
    38701 ggtattcaag taataaaatc attcgcgaaa gaaaatacga gtcttaaaag ttttaaccaa
    38761 gcagtcaatg aaagtaaacg tataaataca aaaatagaaa tgcaatatat cccattcaat
    38821 ttattgcatt tacttagttt aaaagttgtt tcaataatga ttgtattagt tgcatgctta
    38881 ttatatatga atcatagtat tgatttacct acccttatta tgatttcaat tttttcattt
    38941 gtgatatttg atagtgttga aaacattaat agtgcagcac acgtactcga aatgatagat
    39001 atgacgatag atgatattga aaagataaaa aatgctccag aactggatga gaatggaaaa
    39061 aatttgacga ttaaaaatga aaatatcgct tttcaaaacg tgaatttttc atatgatgat
    39121 aaacaagtga taaagaatgt gaattttgag gtacctacac aaacatcaac agcaataatt
    39181 ggaccttcag gaagtgggaa atctacatta tgtcacttac tcttgcgctt ttatgatatc
    39241 gatgatggaa atattcgcat cgatggtgtt gatattaaag atatgacatt aagtacgtta
    39301 atgtcgaaaa ttagtgcagt atttcaaaag gtgtatttat ttaatgatac gattgaaaat
    39361 aacatattgt ttggcaatcc aggtgcaacg aaagaagaaa ttattcgtgt agcgaagcaa
    39421 gcatgttgcc acgacttcat catgtcatta cctgagggat atcaaacaat gctaaatgaa
    39481 aaaggtagta atttatctgg cggagaaaag caaaggattt ctattgctag ggcgatatta
    39541 aaagatgcac caataattat tttagatgaa gcaactgcaa gtattgaccc tgaaaatgaa
    39601 cagctgattc aaacggcaat taatgaatta agtaaaggca aaacagtaat tacaattgca
    39661 cataaacttg aaactattaa aaatgcagat cagattatag tgctcaatga tggtgaaata
    39721 atacaaagag gaagtcataa tgaattaatt caaaaaccag ggatgtatca agattttata
    39781 agaataaaaa gtaagtcagc aggctggaaa ttataaataa tagtttaata tggaatcaga
    39841 atgtggaaat aaaaagggtg atagataatc aacagaaaaa taaacaggct gggatataaa
    39901 tccc
//
LOCUS       DAKPJH010000011        37648 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.011, whole genome shotgun sequence.
ACCESSION   DAKPJH010000011 DAKPJH010000000
VERSION     DAKPJH010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 37648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37648
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.011"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            121..981
                     /locus_tag="OY092_000469"
     CDS             121..981
                     /locus_tag="OY092_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075442.1"
                     /translation="MAKELCFEGITLKAFDEQYRSAINDFDLNERQQIYSSLPKEVID
                     DAINDADRIANVAINDKNEVVGFFVLHRYYQHEGYDTPENVVYIRSLSINEKYQGFGY
                     GTKIMMSLPQYVQGVFPDFNHLYLVVDAENDNAWNLYERAGFMHTATKEEGPIGKERL
                     YYLDLDSKHVSSLKLEEESRSEVTNVHIINLMIDGQKVGFIALEQIGERMNIAAIEVD
                     KSYRFNGIGSSALRQLPTYLRKNYDNLNVITMILFGENNDFKPLCLNSNFVEIEQTDD
                     YVVFEKYLNY"
     gene            1093..1623
                     /locus_tag="OY092_000470"
     CDS             1093..1623
                     /locus_tag="OY092_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HCX1075443.1"
                     /translation="MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALG
                     DYEYEEIETRVVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILD
                     ADDEEDQNLKLLGEDELDDDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDE
                     LDEDEEDFEDEEDFKA"
     gene            1959..3569
                     /locus_tag="OY092_000471"
     CDS             1959..3569
                     /locus_tag="OY092_000471"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HCX1075444.1"
                     /translation="MTKFIFVTGGVVSSLGKGITASSLGRLLKDRGLNVTIQKFDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKFSNVTAGKVYSHVLKKE
                     RRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQ
                     IRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMT
                     QDLKDKIALFCDINKESVIECRDADSLYEIPLQLSQQNMDDIVIKRLQLNAKYETQLD
                     EWKQLLDIVNNLDGKITIGLVGKYVSLQDAYLSVVESLKHAGYPFAKDIDIRWIDSSE
                     VTDENAAEYLADVDGILVPGGFGFRASEGKISAIKYARENNVPFFGICLGMQLATVEF
                     SRNVLGLEGAHSAELDPATPYPIIDLLPEQKDIEDLGGTLRLGLYPCSIKEGTLAQDV
                     YGKAEIEERHRHRYEFNNDYREQLEANGMVISGTSPDGRLVEMVEIPTNDFFIACQFH
                     PEFLSRPNRPHPIFKSFIEASLKYQQNK"
     gene            complement(3678..4199)
                     /locus_tag="OY092_000472"
     CDS             complement(3678..4199)
                     /locus_tag="OY092_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2529 domain-containing protein"
                     /protein_id="HCX1075445.1"
                     /translation="MSKILNTQLIGIFNRLEKQSLEIQMAAQCLIQAIGGEGYVYVKG
                     YDDLQFFESFILHGDERLKSSRKLDAIKDFKEIDSTDRVLLFAPFYNDQVALDIQKLI
                     DLDIDVVLISNKPKTDDFPDHLVHFIDLSTPRPIVYTEDYDKIVQPHAMALNYVYYDI
                     YTQMIEMTRDLEL"
     gene            4417..5277
                     /locus_tag="OY092_000473"
     CDS             4417..5277
                     /locus_tag="OY092_000473"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002468309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HCX1075446.1"
                     /translation="MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAP
                     VILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFT
                     SVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKE
                     CQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGLSTGLPLVLHGGTGIPTKD
                     IQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKI
                     KEFGTSNRAK"
     gene            5743..7002
                     /locus_tag="OY092_000474"
     CDS             5743..7002
                     /locus_tag="OY092_000474"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HCX1075447.1"
                     /translation="MAQEVIKIRGGRTLNGEVNISGAKNSAVAIIPATLLAQGHVKLE
                     GLPQISDVKTLVSLLEDLNIKASLNGTELEVDTTEIQNAALPNNKVESLRASYYMMGT
                     MLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSTTSMKIEAKELKGAHIF
                     LDMVSVGATINIMLAAVYATGQTVIENAAKEPEVVDVANFLTSMGANIKGAGTSTIKI
                     NGVKELHGSEYQVIPDRIEAGTYMCIAAACGENVILNNIVPKHVETLTAKFSELGVNV
                     DVRDERIRINNNAPYQFVDIKTLVYPGFATDLQQPITPLLFMANGPSFVTDTIYPERF
                     KHVEELKRMGANIEVDEGTATIKPSTLHGAEVYASDLRAGACLIIAGLIAEGVTTIYN
                     VKHIYRGYTDIVEHLKALGADIWTETV"
     gene            7091..7426
                     /locus_tag="OY092_000475"
     CDS             7091..7426
                     /locus_tag="OY092_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1075448.1"
                     /translation="MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLK
                     TITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYV
                     DLTDQRTAK"
     gene            7664..9091
                     /locus_tag="OY092_000476"
     CDS             7664..9091
                     /locus_tag="OY092_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCX1075449.1"
                     /translation="MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADV
                     DKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERV
                     HYQMGLNHFVAARDALDNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAA
                     FAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRM
                     MSFTGSGPTGSKIMEKAAKYFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTG
                     QVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYI
                     NKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND
                     LDEAIQIANDTKYGLAGYVIGKNKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQS
                     GLGREWGDYGIEEFLEVKSIAGYFK"
     gene            9338..10654
                     /gene="rho"
                     /locus_tag="OY092_000477"
     CDS             9338..10654
                     /gene="rho"
                     /locus_tag="OY092_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HCX1075450.1"
                     /translation="MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKK
                     ELVLAIMEAQMEKDGNYYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEI
                     KRGDKVTGKVRKPKDNEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLET
                     ETQNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVG
                     ERPEEVTDLERSVEAAEVVHSTFDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSI
                     TRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGS
                     RMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDTLWQL
                     RNLFTDSTDFTERFIRKLKRSKNNEDFFKQLQKSAEESTKTGRPII"
     gene            10772..11026
                     /locus_tag="OY092_000478"
     CDS             10772..11026
                     /locus_tag="OY092_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HCX1075451.1"
                     /translation="MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYP
                     VIRLDISSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNN"
     gene            11372..11971
                     /locus_tag="OY092_000479"
     CDS             11372..11971
                     /locus_tag="OY092_000479"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HCX1075452.1"
                     /translation="MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKP
                     AIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDEIVSIVE
                     KLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLIN
                     GKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL"
     gene            11972..13048
                     /gene="prfA"
                     /locus_tag="OY092_000480"
     CDS             11972..13048
                     /gene="prfA"
                     /locus_tag="OY092_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HCX1075453.1"
                     /translation="MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKT
                     VDVYRNYKAKKEELADIEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPK
                     DPNDDKDVIVEIRAAAGGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKE
                     ISFSVSGNGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNE
                     DLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGVIATSSEKSQIQNREKAMKVLKARLY
                     DMKVQEEQQKYASQRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHL
                     EEIIDALTLSEQTDKLKELNNGEL"
     gene            13035..13871
                     /gene="prmC"
                     /locus_tag="OY092_000481"
     CDS             13035..13871
                     /gene="prmC"
                     /locus_tag="OY092_000481"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000248725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCX1075454.1"
                     /translation="MVNYKEKLDEAIHLTQQKGFEQTRAEWLMLDVFQWTRTDFVVHM
                     HDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETEEVMLH
                     FLQQLEDDATIVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQI
                     QFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAI
                     YESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKFPDKKIDIIKDINGHDRIVSF
                     KW"
     gene            13955..15001
                     /locus_tag="OY092_000482"
     CDS             13955..15001
                     /locus_tag="OY092_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HCX1075455.1"
                     /translation="MDTKIWDVREYNEDLQQYPKINEIKDIVLNGGLIGLPTETVYGL
                     AANATDEEAVAKIYEAKGRPSDNPLIVHIHSKDQLKDFTYILDAPVEKLMQAFWPGPI
                     SFILPLKPGYLCRKVSGGLSSVAVRMPSHSVGRQLLQIINEPLAAPSANLSGRPSPTT
                     FNHVYQDLNGRIDGIVQAEQSEEGLESTVLDCTSFPYKIARPGSITAAMITDILPNSI
                     THADYNDTEQPIAPGMKYKHYSPNTPLTIITDIESKIGNDGKDWSSIAFIVPSNKVAF
                     IPSEAQFIQLCQDDNDVKQASHNLYDVLHSLDENENISAAYIYGFELNDNTEAIMNRM
                     LKAAGNHIVKGCEL"
     gene            14998..15417
                     /locus_tag="OY092_000483"
     CDS             14998..15417
                     /locus_tag="OY092_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HCX1075456.1"
                     /translation="MKILFVCTGNTCRSPLAESIAKEVMPNHQFESRGIFAVNNQGVS
                     NYVEDIVEEHHLAETTLSQQFTEADLKADIILTMSYSHKELIEAQFGLQNHVFTLHEY
                     VKEAGEVIDPYGGTKEMYVHTYEELVSLILKLKDIIC"
     gene            15524..16048
                     /locus_tag="OY092_000484"
     CDS             15524..16048
                     /locus_tag="OY092_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HCX1075457.1"
                     /translation="MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSME
                     VAETIFNALDVVSKETGVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPNVHAGGS
                     LATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIAT
                     SRPKKIGGERAKYQ"
     gene            16075..17313
                     /locus_tag="OY092_000485"
     CDS             16075..17313
                     /locus_tag="OY092_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HCX1075458.1"
                     /translation="MSYITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQG
                     SVLTNKYAEGYPGRRYYGGCEFVDVTESIAINRAKALFGAEHVNVQPHSGSQANMAVY
                     LVALEMGDTVLGMNLSHGGHLTHGAPVNFSGKFYNFVEYGVDKDTERINYDEVRKLAL
                     EHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYAD
                     FVTTTTHKTLRGPRGGMILCKEEYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALEN
                     NFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDS
                     VGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALKNSKDEE
                     KLQQAKERVAKLTAEYPLYQ"
     gene            17341..17970
                     /gene="upp"
                     /locus_tag="OY092_000486"
     CDS             17341..17970
                     /gene="upp"
                     /locus_tag="OY092_000486"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HCX1075459.1"
                     /translation="MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEV
                     TRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGL
                     YRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCL
                     IAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK"
     gene            17994..19121
                     /gene="wecB"
                     /locus_tag="OY092_000487"
     CDS             17994..19121
                     /gene="wecB"
                     /locus_tag="OY092_000487"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HCX1075460.1"
                     /translation="MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREML
                     DSVLSTFEIKPKYDLNIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFA
                     GGLAAFYNQVPIGHVEAGLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSE
                     GKYSESVVVTGNTAIDAMKYTVDDNYKSNIMDKYHDKKFILMTAHRRENIGQPMENIF
                     KAVRRLIDEYTDLALVYPMHKNPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSY
                     FILTDSGGIQEEAPSFNKPVLVLRSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDD
                     ERLYHQMSEASNPYGDGFASERIVNHIKYYLNLITEKPSDF"
     gene            19189..19641
                     /locus_tag="OY092_000488"
     CDS             19189..19641
                     /locus_tag="OY092_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HCX1075461.1"
                     /translation="MNRIDTTNRLYYHLVCMSGTVFMIDISHTEAYKMSRFYNIFKQF
                     IQYYLYLLIILGGLYLFTHHAFILGLIIGVTGSAINTVIFESYLAKAKRPDTMHISTG
                     NMWRYLVAIIACMIWYFNKSHVSIIGIIIGLMISYVVVIIRPLLKVSK"
     gene            19662..20390
                     /gene="atpB"
                     /locus_tag="OY092_000489"
     CDS             19662..20390
                     /gene="atpB"
                     /locus_tag="OY092_000489"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HCX1075462.1"
                     /translation="MDHKSPLVSWNLFGFDIVFNLSSILMILVTAFLVFLLAIICTRN
                     LKKRPTGKQNFVEWIFDFVRGIIEGNMAWKKGGQFHFLAVTLILYIFIANMLGLPFSI
                     VTKDHTLWWKSPTADATVTLTLSTTIILLTHFYGIKMRGTKQYLKGYVQPFWPLAIIN
                     VFEEFTSTLTLGLRLYGNIFAGEILLTLLAGLFFNEPAWGWIISIPGLIVWQAFSIFV
                     GTIQAYIFIMLSMVYMSHKVADEH"
     gene            20434..20646
                     /gene="atpE"
                     /locus_tag="OY092_000490"
     CDS             20434..20646
                     /gene="atpE"
                     /locus_tag="OY092_000490"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HCX1075463.1"
                     /translation="MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMG
                     IMFIGVGLVEALPIIGVVIAFMTFAG"
     gene            20844..21365
                     /locus_tag="OY092_000491"
     CDS             20844..21365
                     /locus_tag="OY092_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HCX1075464.1"
                     /translation="MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLK
                     DVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQE
                     QIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQK
                     ALVDKYLKEAGDK"
     gene            21365..21904
                     /locus_tag="OY092_000492"
     CDS             21365..21904
                     /locus_tag="OY092_000492"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HCX1075465.1"
                     /translation="MVKVANKYAKALFDVSLDTNNLETINQELTVINEAVKDKIEQLK
                     MVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGH
                     YNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
                     DGSVRNDLVQLQRKFRRVN"
     gene            21926..23434
                     /locus_tag="OY092_000493"
     CDS             21926..23434
                     /locus_tag="OY092_000493"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HCX1075466.1"
                     /translation="MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGL
                     NDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEE
                     LIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGAL
                     DYTIVVAASASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNV
                     ISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYREL
                     ESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPV
                     VDITRFEDELNHWAESNATELLNEIRETGGLPDAEKFDTAINEFKKSFSKSE"
     gene            23465..24331
                     /locus_tag="OY092_000494"
     CDS             23465..24331
                     /locus_tag="OY092_000494"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500821.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HCX1075467.1"
                     /translation="MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTP
                     YMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVITSDKGLAGAYSANVLKKLITD
                     IEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY
                     SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSV
                     ILPQYVESLIYGTILDAKASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQ
                     ITEIVGGSAALE"
     gene            24353..25765
                     /gene="atpD"
                     /locus_tag="OY092_000495"
     CDS             24353..25765
                     /gene="atpD"
                     /locus_tag="OY092_000495"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HCX1075468.1"
                     /translation="MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLT
                     LEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDL
                     KEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVG
                     KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEP
                     PGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTE
                     MGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDE
                     DKQTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAF
                     RLVGSMDDVIAKAKDMGVEV"
     gene            25785..26189
                     /locus_tag="OY092_000496"
     CDS             25785..26189
                     /locus_tag="OY092_000496"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HCX1075469.1"
                     /translation="MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVA
                     ALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAE
                     SHLENDDDNTDIHRAERALERANNRLRVAELK"
     gene            26641..26733
                     /locus_tag="OY092_000497"
     CDS             26641..26733
                     /locus_tag="OY092_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075470.1"
                     /translation="MLKSKFPSPLSTVDISFFESSYIFSCQDTL"
     gene            26865..27098
                     /locus_tag="OY092_000498"
     CDS             26865..27098
                     /locus_tag="OY092_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HCX1075471.1"
                     /translation="MDYIGQYAVIHLVLHVVCICIAYWALQSIRLDQFFKKGYATQLQ
                     VCMIFVAILLGTAVSNFIVDLLQYSTQVKYLIK"
     gene            27209..28474
                     /gene="murA"
                     /locus_tag="OY092_000499"
     CDS             27209..28474
                     /gene="murA"
                     /locus_tag="OY092_000499"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HCX1075472.1"
                     /translation="MDKIVIKGGNKLTGEVKVEGAKNAVLPILTASLLASDKPSKLVN
                     VPALSDVETINNVLTTLNADVTYKKDENAVVVDATKTLNEEAPYEYVSKMRASILVMG
                     PLLARLGHAIVALPGGCAIGSRPIEQHIKGFEALGAEIHLENGNIYANAKDGLKGTSI
                     HLDFPSVGATQNIIMAASLAKGKTLIENAAKEPEIVDLANYINEMGGRITGAGTDTIT
                     INGVESLHGVEHAIIPDRIEAGTLLIAGAITRGDIFVRGAIKEHMASLVYKLEEMGVE
                     LDYQEDGIRVRAEGELQPVDIKTLPHPGFPTDMQSQMMALLLTANGHKVVTETVFENR
                     FMHVAEFKRMNANINVEGRSAKLEGKSQLQGAQVKATDLRAAAALILAGLVADGKTSV
                     TELTHLDRGYVDLHGKLKQLGADIERIND"
     gene            28508..28948
                     /gene="fabZ"
                     /locus_tag="OY092_000500"
     CDS             28508..28948
                     /gene="fabZ"
                     /locus_tag="OY092_000500"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HCX1075473.1"
                     /translation="METIFDYNQIKQIIPHRQPFLLIDKVVEYEEGQRCVAIKQVSGN
                     EPFFQGHFPEYAVMPGVLITEALAQTGAVAILNSEENKGKIALFAGIDKCRFKRQVVP
                     GDTLTLEVEITKIKGPIGKGNAKATVDGQLACSCELTFAIQDVK"
     gene            complement(29006..29446)
                     /locus_tag="OY092_000501"
     CDS             complement(29006..29446)
                     /locus_tag="OY092_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwpF-like family protein"
                     /protein_id="HCX1075474.1"
                     /translation="MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVI
                     SNEHYETFKEYQDSEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYT
                     LRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE"
     gene            29640..30035
                     /locus_tag="OY092_000502"
     CDS             29640..30035
                     /locus_tag="OY092_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1075475.1"
                     /translation="MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIV
                     CDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRKYDKDGQTHFVTELYVETIKFMS
                     PKSQNNEILSDSILDIDSQNIDNHDLLEI"
     gene            30424..31119
                     /gene="sceD"
                     /locus_tag="OY092_000503"
     CDS             30424..31119
                     /gene="sceD"
                     /locus_tag="OY092_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase SceD"
                     /protein_id="HCX1075476.1"
                     /translation="MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSN
                     DQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGADMSAQAPATNNV
                     APSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNDHLK
                     QIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVK
                     LYNTGGAGHWVTA"
     regulatory      31324..31426
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            31506..32195
                     /gene="tenA"
                     /locus_tag="OY092_000504"
     CDS             31506..32195
                     /gene="tenA"
                     /locus_tag="OY092_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HCX1075477.1"
                     /translation="MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQAD
                     AAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILAQIVGESYEEIIK
                     TKVWPPSGDHYRKHMYFQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT
                     AKWFDFYSTEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL
                     EQWEFGGKVND"
     gene            32188..33018
                     /gene="thiD"
                     /locus_tag="OY092_000505"
     CDS             32188..33018
                     /gene="thiD"
                     /locus_tag="OY092_000505"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HCX1075478.1"
                     /translation="MIKPKIALTIAGTDPTGGAGVMADLKSFHSCGVYGMGVVTSIVA
                     QNTLGVQHIHNLNHQWVDEQLDSVFNDTLPHAIKTGMIATADTMETIRHYLMQHESIP
                     YVIDPVMLAKSGDSLMDNDTKQNLQHTLLPLADVVTPNLPEAEEITGLTIDSEEKIMQ
                     AGRIFINEIGSKGVIIKGGHSNDTDIAKDYLFTNEGVQTFENERFKTKHTHGTGCTFS
                     AVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRGRGPVNHFAYLKKEGLDDELSK
                     "
     gene            33002..33793
                     /gene="thiM"
                     /locus_tag="OY092_000506"
     CDS             33002..33793
                     /gene="thiM"
                     /locus_tag="OY092_000506"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HCX1075479.1"
                     /translation="MNYLNKIRIENPLTICYTNDVVKNFTANGLLSIGASPAMSEAPE
                     EAEEFYKVAQALLINIGTLTAENEQDIIAIAQTANEAGLPIVFDPVAVGASTYRKQFC
                     KLLLKSAKVSVIKGNASEILALIDDTATMKGTDSDANLDAVTIAKKAYATYKTAIVIT
                     GKEDVIVQDNKAIVLANGSPLLARVTGAGCLLGGVIAGFLFRETEPDIEALIEAVSVF
                     NIAAEVAAENENCGGPGTFSPLLLDTLYHLNETTYQQRIRIQEVE"
     gene            33795..34436
                     /locus_tag="OY092_000507"
     CDS             33795..34436
                     /locus_tag="OY092_000507"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HCX1075480.1"
                     /translation="MFNQSYLNVYFICGTSDVPSHRTIHEVLEAALKAGITLFQFREK
                     GESALKGNDKLVLAKELQHLCHQYDVPFIVNDDVSLAKEINADGIHVGQDDAKVKEIA
                     QYFTDKIIGLSISDLDEYAKSDLTHVDYIGVGPIYPTPSKHDAHIPVGPEMIATFKEM
                     NPQLPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTVNRFKDFFNN"
     gene            34522..35394
                     /gene="yidC"
                     /locus_tag="OY092_000508"
     CDS             34522..35394
                     /gene="yidC"
                     /locus_tag="OY092_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HCX1075481.1"
                     /translation="MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVL
                     DWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEK
                     VKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVD
                     GLFKYPHFLWFDLGRPDIWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMI
                     IWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNK
                     KGKNTQVVSKKKKK"
     gene            complement(35872..36519)
                     /locus_tag="OY092_000509"
     CDS             complement(35872..36519)
                     /locus_tag="OY092_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HCX1075482.1"
                     /translation="MQQSDIISAAKKYMESIHQNDYTGHDIAHVYRVTALAKSIAENE
                     GVNDTLVIELACLLHDTVDEKVVDANKQYVELKSFLSSLSLSTEDQEHILFIINNMSY
                     RNGKNDHVTLSLEGQIVRDADRLDAIGAIGVARTFQFAGHFGEPMWTEHMSLDKINDD
                     LVEQLPPSAIKHFFEKLLKLESLMHTDTAKMIAKERQDFMMMYLKQFFTEWNYHD"
     gene            complement(36547..>37648)
                     /gene="cls"
                     /locus_tag="OY092_000510"
     CDS             complement(36547..>37648)
                     /gene="cls"
                     /locus_tag="OY092_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HCX1075483.1"
                     /translation="TDNDLKIYTDGQEKFDDLIQDIRNATDYIHFQYYIIQNDELGRT
                     ILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAEAFFPSKLPLINLRMN
                     NRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVGDAVNALQLRFILD
                     WNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYLKMISSAKKSIY
                     IQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAASLLDAGVKVF
                     HYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLKQAFIDDL
                     AVSSELTKERYAKRSLWIKFKEGISQLLSPIL"
BASE COUNT        13337 a         5598 c         7256 g        11457 t
ORIGIN      
        1 ttaaaaaata taaataagta atttatttaa cttagagtaa ataatggtat cgtagtgaaa
       61 taataggtaa aataatatgg ggattcatgc ttcatatata aaaagatagg ggttaaatat
      121 atggctaaag aactttgttt tgaaggtatc actttaaaag catttgatga acaatatcgt
      181 tcagcaatta atgattttga cttgaatgaa agacaacaaa tatattcatc tttacctaaa
      241 gaagttattg atgatgcaat taatgatgct gataggattg ctaacgtagc aataaacgat
      301 aaaaatgaag tggtgggctt ttttgtatta catcgttact atcagcatga aggttatgat
      361 acacctgaaa atgtcgttta tattcgttca ttatcgatta atgaaaaata tcaaggtttt
      421 ggatatggca cgaaaataat gatgtcattg ccgcaatatg ttcaaggtgt atttcctgat
      481 tttaatcatc tatatctagt agtagatgcg gaaaatgaca atgcttggaa cctatacgaa
      541 cgtgctggat tcatgcatac agcgactaaa gaagaaggac caatcggcaa agaacgacta
      601 tattacttgg acttagattc aaaacatgtt tcgtcattaa agcttgaaga agaaagtcgt
      661 tcagaagtga ccaatgtaca tatcattaat ttaatgattg atggccaaaa ggttggcttt
      721 atcgcattgg agcagattgg tgaacgcatg aacattgctg ctattgaagt ggataaatca
      781 tatcgcttta atggtattgg ttcaagtgcg ctgcgacaat tgccaactta cttaagaaaa
      841 aactatgaca accttaatgt gattacgatg attctgtttg gagagaataa tgattttaaa
      901 ccattatgtc taaatagtaa tttcgttgaa atcgaacaaa ctgatgatta tgtcgttttc
      961 gaaaaatatt taaattacta acagtgattg cgaaatatga tattgtcatt tataatttag
     1021 ttttgttact atatataaat gaattcagac gtataaattt agattatatc cttcgaaagg
     1081 aagtattggg caatgaaaat tcaagattat acaaaacaaa tggttgatga aaaatcattt
     1141 attgatatgg cttatacatt attgaatgat aaaggtgaaa caatgaactt atatgatatc
     1201 atcgatgaat ttagagcatt aggtgattat gagtatgagg aaattgaaac tcgtgttgta
     1261 caattttaca cagatttaaa tacagatgga cgttttttaa atgttggtga aaacttatgg
     1321 ggattacgtg actggtactc agtagatgat atcgaagaga aaattgcacc aacaattcaa
     1381 aaatttgata ttttagacgc cgatgatgaa gaagatcaaa acttaaaatt attgggtgaa
     1441 gatgaattgg atgatgatga cgatattcca gctcaaactg atgatcaaga agaattaaat
     1501 gatcctgaag atgagcaagt tgaagaagaa atcaatcatt cggatatagt cattgaagaa
     1561 gatgaagatg aactagatga agacgaagaa gattttgaag acgaagaaga cttcaaagca
     1621 taattttttg tttgactttt agttgaaaga tgataaaatt ttattcgggc tcctttaaat
     1681 aggacacgtg tataaaattt atacgctccc cttacaaaat ttgtgagagg gagcgttttt
     1741 ttatttaatt gagtaaatca agaaatgata acgcaataat caaagttgta aatgatatac
     1801 atagtgacat agcagtatgg aaacggtaag taaacagaat ttaattttgt cgaattcgac
     1861 aaacaaacaa cttgaatgag cttactcaaa tgttatgttt tacgtaattt ttacaattga
     1921 tgaggaagca ttccctttaa taattaggag gtcaagacat gacaaaattt atttttgtaa
     1981 caggtggcgt agtttcatca ttagggaagg gtattacagc atcttctcta ggtagattat
     2041 taaaagatag aggtcttaat gtaacaattc aaaaattcga tccatactta aatgttgacc
     2101 caggtacaat gagtccttat caacatggtg aagtattcgt aacggatgat ggtgcagaaa
     2161 ctgacctaga cttaggacat tacgaaagat ttattgatat taatttaaac aagttttcaa
     2221 atgtaacagc cggtaaagtg tattcacacg tactgaaaaa agaacgtcgt ggtgattact
     2281 taggcggaac agttcaagtt attccgcata ttacaaatga aattaaagaa cgtttattac
     2341 ttgcagggga aagtacgaat gcagacgttg ttatcactga aattggcggt acaacaggtg
     2401 atattgagtc attaccgttt attgaagcga ttcgtcaaat tcgtagtgat ttaggtagag
     2461 aaaatgttat gtatgttcac tgtacattac tgccttatat taaagctgct ggagaaatga
     2521 aaacgaagcc aacacaacat agtgttaaag aattacgagg tttaggtatt caaccagact
     2581 taatcgttgt aagaactgaa tatgaaatga cacaagattt aaaagataaa attgcattat
     2641 tctgtgacat taataaagaa agtgttattg aatgtcgtga tgcagactct ttatacgaaa
     2701 ttccattaca attaagccaa caaaatatgg atgatatcgt tattaaacgt ttacaattaa
     2761 acgcgaaata tgaaacacag cttgatgaat ggaaacagtt gttagatatc gttaataatt
     2821 tagatggtaa aattacaatt ggtttagtag gtaaatatgt tagcttacaa gatgcatatt
     2881 tatcagttgt tgaatcattg aaacatgctg gatatccttt tgccaaagat attgacatta
     2941 gatggattga ttcaagtgaa gtaacagatg aaaatgcagc cgaatacctt gcagatgtcg
     3001 acggtatttt agtaccaggt ggatttggtt tccgtgcaag tgaaggtaaa attagtgcaa
     3061 ttaagtatgc tagagaaaac aatgtaccat tctttggtat ttgtttagga atgcaacttg
     3121 caacagttga attttcaaga aacgtattag gccttgaagg cgcacattca gctgaactag
     3181 acccagcaac accataccca attatagatt tattaccaga acaaaaagat atcgaagatt
     3241 taggtggtac attacgctta ggcttatatc catgttcaat taaagaaggt acattggcac
     3301 aagatgttta tggtaaagcg gaaattgaag aaagacatcg tcatcgttat gaatttaata
     3361 atgactatag agaacaatta gaagcaaatg gtatggtaat ttctggtaca agtccagatg
     3421 gacgtttagt agaaatggta gagattccga caaatgattt ctttattgct tgtcaattcc
     3481 acccagaatt cttatctaga ccaaatcgtc cgcacccgat ttttaaatca tttattgaag
     3541 cttcattaaa atatcaacaa aataaataaa tttgctaata aaaccggtac tttcattgtt
     3601 aaacattgaa agtaccggtt tttcgtataa ttttaatatt atgttagtga caaggtatga
     3661 aataacaata gtgactttta taattctaag tctcttgtca tttcaatcat ttgtgtataa
     3721 atgtcatagt atacataatt caatgccatc gcatgtggtt ggacaatctt atcgtaatct
     3781 tcagtgtaga ctataggtct tggtgtagat aaatcgataa aatgtacgag atgatcaggg
     3841 aaatcatctg ttttaggttt gttgcttatt aagaccacat cgatatctaa gtcgataagt
     3901 ttttgaatat ctaatgcaac ttgatcatta taaaatggtg cgaataataa tacacgatca
     3961 gttgagtcaa tttctttaaa gtctttaata gcgtcaagtt ttcggctaga ttttaaacgc
     4021 tcatcaccat gtagaatgaa actttcgaaa aactgtaaat catcataacc ttttacataa
     4081 acataacctt cgccaccaat tgcttgaatt aaacattggg cagccatttg aatttccaaa
     4141 gattgttttt ctagcctatt aaagatacct attagttgtg tgtttaagat ttttgacatc
     4201 tttatcctcc aatctactta taaaatattg taattaatga ctacatatta tgcaacggct
     4261 taaattgtat aaaaatgtat acgtttgcat ttattataac tatcgcattt ttcaaaaaat
     4321 acacatttaa tctgcagtat ttcaatgcat tgacgctatt tttttgatat aattactttg
     4381 aaaaatacgt gcgtaagcac tcaaggagga actttcatgc ctttagtttc aatgaaagaa
     4441 atgttaattg atgcaaaaga aaatggttat gcggtaggtc aatacaatat taataaccta
     4501 gaattcactc aagcaatttt agaagcgtca caagaagaaa atgcacctgt aattttaggt
     4561 gtttctgaag gtgctgctcg ttacatgagc ggtttctaca caattgttaa aatggttgaa
     4621 gggttaatgc atgacttaaa catcactatt cctgtagcaa tccatttaga ccatggttca
     4681 agcttcgaaa aatgtaaaga agctatcgat gctggtttca catcagtaat gatcgatgct
     4741 tcacacagcc cattcgaaga aaacgtagca acaactaaaa aagttgttga atacgctcat
     4801 gaaaaaggtg tttctgtaga agctgaatta ggtactgttg gtggacaaga agatgatgtt
     4861 gtagcagacg gtatcattta tgctgatcct aaagaatgtc aagaactagt tgaaaaaact
     4921 ggtatcgatg cattagcgcc agcattaggt tcagttcatg gtccatacaa aggtgaacca
     4981 aaattaggat ttaaagaaat ggaagaaatc ggtttatcta caggtttacc attagtatta
     5041 cacggtggta ctggtatccc gactaaagat atccaaaaag caattccatt tggtacagct
     5101 aaaattaacg taaacactga aaaccaaatc gcttcagcaa aagcagttcg tgacgtttta
     5161 aataacgaca aagaagttta cgatcctcgt aaatacttag gacctgcacg tgaagctatc
     5221 aaagaaacag ttaaaggtaa aattaaagag ttcggtactt caaaccgtgc taaataatta
     5281 atatttagtt tttaagttat taataacgta gggatattaa tttcaaaaag gagcagacag
     5341 aatggtgttt gcttcttttt tatgttgtta aggcacgaat tgatacagca cattttaaaa
     5401 gttgaagcta aaaatgatga aatatacaaa aaatgattgt gctataatta tatagaaaat
     5461 gctgtagttg atgaataaaa acatacaaaa gcaatcccac taaagctgaa ttggctgtca
     5521 aaataatgtc aatatttgag cgaacaatca gactttagac catggtcaag cgggtaataa
     5581 catcatatat taattaaggt gaatgatgcg ttattaatca atcgtaatag aaagacaaga
     5641 ttttaacgat taaaataaac tattttacaa ataaagtaaa attaatttat aatgctaata
     5701 atgcaaaaaa ttaaaaagta atggacaaag gagataaatg atatggctca agaggtaata
     5761 aaaataagag gtggacgcac actaaatggg gaagttaata tcagtggcgc gaaaaacagt
     5821 gctgtagcta tcattcctgc aacattatta gctcaaggac atgtgaaatt agaagggtta
     5881 ccgcaaatct ctgatgttaa aactttagtg agtttattag aagatttaaa tattaaggca
     5941 tcactaaatg gtacggaatt agaagttgat acaactgaaa tacaaaatgc tgcattacca
     6001 aataataaag ttgaatcatt acgtgcttca tactatatga tgggtaccat gttaggtaga
     6061 tttaaaaaat gtgtgattgg tttaccggga ggatgtccac ttgggccacg tccaattgat
     6121 caacatatta aaggatttaa agctttaggt gctgaaattg atgaatcaag tacgacatca
     6181 atgaaaattg aagctaaaga gttaaaaggt gcacatattt ttctagatat ggttagcgta
     6241 ggtgcaacaa ttaacattat gctagctgca gtttatgcaa caggacaaac tgtaattgaa
     6301 aatgctgcta aagaaccgga agtagttgat gttgctaact tcttaacaag tatgggagct
     6361 aatattaagg gagcgggtac atcaacgatt aaaatcaatg gtgtcaaaga attacatggt
     6421 tctgagtatc aagttatacc tgatagaatt gaagcaggca catatatgtg tatcgctgca
     6481 gcatgtggag aaaatgttat attaaataat attgttccga aacatgtaga aacattaact
     6541 gctaaattta gtgaattagg tgtgaatgtt gatgtaagag acgaaagaat tcgtatcaat
     6601 aataatgcac catatcaatt tgttgatatt aaaacactag tatatccagg ttttgctact
     6661 gatttacaac agcctattac accattatta tttatggcaa atggtccttc atttgtaact
     6721 gatacgattt atccggagcg ttttaaacat gttgaagaat taaagcgcat gggtgcaaat
     6781 attgaagttg acgaaggcac agcaacgata aaaccatcaa cattacatgg tgctgaagtt
     6841 tatgctagcg atttaagagc aggagcttgt ttaattattg ctggtttaat tgctgagggt
     6901 gtaactacaa tttacaatgt aaaacatatt tatagaggtt atacagatat tgtagaacac
     6961 ttaaaagctt taggtgcaga tatttggacg gaaactgtat agatttatct tgttttgtgg
     7021 tataataatt atactgatta aaaaagggtg ttcgtttaca ttctaaattt attgatgaga
     7081 ggtgaagatg atggaagtat gtccgtatct cgaagaaact tttaaaatac ttggtagaag
     7141 ttggaatgga ttaatcatta attatctctc aagatgtaat gactgttcag cacacttttc
     7201 cgatatgaaa agagatttga aaacaataac gccacgtgct ttaagtctta agttgtcaga
     7261 gcttgcacaa tgggagttag ttgagaagca aatcatttct acgagtccag tacaaattat
     7321 ttatgtacta actgaaaaag gtaaagcgtt agcagaggct ttacatccaa ttgaagcatg
     7381 ggcgcaatca tatgtcgatt taacagatca acgtactgct aaataattac atgacgttta
     7441 aacatagcat tgattataac tatttctaag tcttcgcatt atttgcgatg atgaaggaat
     7501 agttattttt atttaaaaat ataaaaaatt agatgcagca aaattttaaa gcattttatt
     7561 ttgaacatat taaaagggag cgtatcataa tggaatgtaa tgtttatatc gtatgcatta
     7621 cggataaata atatataaat cattcttgag gagtgaaaga ataatgagag actacacaaa
     7681 gcaatacatt aatggcgaat gggtagaaag taatagtaat gaaacgatag aagttataaa
     7741 tccagcaacc gaagaagtaa tcgggaaagt tgctaaaggt aataaagctg atgttgataa
     7801 agccgtcgag gcggcagacg atgtttattt agagttccgt catacatctg tgaaagaaag
     7861 acaagcgtta ttagataaaa ttgtaaaaga atatgaaaac agaaaagacg atattgtaca
     7921 agctattacg gatgaattag gtgctccttt atcattatct gagcgtgtcc attatcaaat
     7981 gggactaaac cattttgttg cagcgagaga cgcattagat aactacgaat ttgaagaacg
     8041 ccgcggagat gatttagttg ttaaagaagc aatcggtgta tctggcttaa ttacaccgtg
     8101 gaacttccct acaaaccaaa catcattaaa attagcagca gcatttgcgg ctggtagtcc
     8161 agttgtactt aaaccatctg aagaaacacc atttgcagct gttattttag ctgagatttt
     8221 tgataaagtc ggtgttccta aaggtgtatt taaccttgtt aatggtgatg gtgctggcgt
     8281 tgggaatcct ttatctgagc atcctaaagt acgcatgatg tcatttacag gatcaggccc
     8341 tactggttct aaaattatgg aaaaagctgc taaatatttt aaaaaggtat cattagagct
     8401 tggtggcaaa tcaccataca tcgtcctaga tgacgtagat attaaagaag cggctaaagc
     8461 aacaacaggc aaagttgtta ataatactgg tcaagtatgt acagctggta cacgtgtttt
     8521 agtgcctaac aaaattaaag atgcattctt agctgaatta aaagaacaat ttagccaagt
     8581 gcgtgtcggt aatccaagag aagatggtac acaagtaggc cctatcatta gtaaaaaaca
     8641 atttgatcaa gtacaaaatt atattaataa aggtattgaa gaaggtgctg aattatttta
     8701 tggtggtcct ggtaaaccag aaggacttga aaaaggatac tttgcacgtc cgacaatttt
     8761 tattaatgta gataatcaaa tgacgatagc acaagaagaa atttttgggc cagtaatgtc
     8821 agttatcact tataacgatt tagatgaagc gattcaaatt gcaaatgata caaaatatgg
     8881 tttggcagga tatgttattg gtaagaacaa agaaacattg cataaagtag ctcgttctat
     8941 tgaagcaggt acagtagaaa taaatgaagc aggcagaaag ccagacttac catttggtgg
     9001 ctataaacaa tctggtttag gtcgtgaatg gggcgattat ggtattgaag agttcttaga
     9061 agtgaaatct atagctggct attttaaata aatttgattt ttgaattaaa aatcgcaata
     9121 aaacagtgca catgactaat taagttttgt gtactgtttt aattttgcaa tttttataaa
     9181 tagattttgt aattaaaata aaaatttgct atagttattc atgtatttaa aaggttgggg
     9241 attagcataa tgggattgtg ctagcacagt tatttatgca ttgtcatgcc tatctattac
     9301 ttactaacta aaaaataatg aaatgggtgt aaactatatg cctgaaagag aacgtacatc
     9361 tcctcagtat gaatcattcc acgaattgta caagaactat actaccaagg aactcactca
     9421 aaaagctaaa actcttaagt tgacgaacta tagtaaatta aataaaaaag aacttgttct
     9481 agctattatg gaagcacaaa tggaaaaaga tggtaactat tatatggaag gtatcttaga
     9541 tgatatacaa ccagatggtt atggtttttt aagaacagtg aactattcta aaggggaaaa
     9601 agatatttat atatctgcta gccaaattcg tcgttttgaa attaaacgtg gggataaagt
     9661 aactgggaaa gttagaaaac ctaaagataa cgaaaaatat tatggcttat tacaagttga
     9721 ctttgttaat gaccataacg cagaagaagt gaagaaacgt ccgcatttcc aagctttgac
     9781 accactttat ccagatgagc gtattaaatt agagacagaa acacaaaatt attcaacgcg
     9841 catcatggat ttagtaacac cgattggttt aggtcaacgt ggtttaatag tggcgccacc
     9901 taaagcaggt aaaacatcgt tattaaaaga gatagcgaat gcaatcagta cgaacaaacc
     9961 agatgcaaag ctatttattt tgttagttgg cgagcgtcct gaagaggtaa cagatttaga
    10021 acgctcagta gaagctgctg aagtcgttca ttcaacgttt gacgaaccac cagaacacca
    10081 tgttaaagta gctgaattat tacttgaacg tgcaaagcgt ttagtagaaa ttggggaaga
    10141 tgtcattatt ttaatggatt ctataacgag attagcacgc gcttataact tagttattcc
    10201 accaagtggt cgtacattat caggtggttt agatcctgca tctttacaca aaccaaaagc
    10261 attcttcggt gcagcgagaa atattgaagc gggtggaagt ttaacaatac ttgcaactgc
    10321 attagttgat acgggttcac gtatggacga tatgatttac gaagagttta aaggaacagg
    10381 taacatggag ttacatttag atcgtaaatt gtctgaacgt cgtattttcc ctgcaattga
    10441 tattggcaga agttcaacgc gtaaagaaga attgttgata agtaaatctg aattagacac
    10501 attatggcaa ttaagaaatc tattcactga ctcaacagac tttactgaaa gatttattcg
    10561 caaacttaaa aggtctaaga ataatgaaga tttcttcaag cagctacaaa agtctgcaga
    10621 agaaagtact aaaacgggtc gacctataat ttaataaaca ttatataggg gcttgcgttt
    10681 tgaattaatt acctttataa ttacacagta ttgggtaaaa actcacaaat aactctgttc
    10741 cagatggttc agggcaaagg agctgaaaat aatgaaacaa ggaattcatc ctgagtatca
    10801 ccaagtaatc tttttagata ctactacaaa cttcaaattc ttaagcggtt ctacaaaaac
    10861 atcttcagaa atgatggagt gggaagatgg aaaagaatac ccagttattc gtttagatat
    10921 ttcatctgat tcacatccat tctacactgg acgtcaaaaa ttcgctgctg cggatggacg
    10981 tgtggaacgt ttcaacaaaa agtttggtct taaatcaaac aactaatata gtaatcgtta
    11041 agctgtctgc atcctataat ggaattgtag acagcttttt tatttataag cgtagtaagg
    11101 gtatatactt acgactgtgt tcaaagaagt gactcaatac catgttgtta atacataatg
    11161 ataaatttcc cctttattaa agtttgtatt gagtagaaac aacgcacgaa taagaagcaa
    11221 caaattagaa tagctgtata taaatatgca agacaaattt ataaaataat tgttcatgta
    11281 caatatcgat ataattatga aaaagacatt tatgaatatt tgaaatatga tataataaag
    11341 cgattatgtt ttgaaaaagg tggaactctc aatgtatgaa acttaccatt ccggttggat
    11401 agaatgtatt acaggtagta tgtttagcgg taaatccgaa gaactaataa gacgtctaag
    11461 aaggggtata tacgctaaac aaaaagtcgt tgtatttaaa ccggcgattg atgatcgata
    11521 tcataaagaa aaagtggtct ctcataatgg taatgccatt gaagcgatta atatttctaa
    11581 agcaagtgaa attatgacgc acgacttaac taatgttgat gttataggaa tagacgaagt
    11641 gcaatttttt gacgatgaaa ttgtaagtat agtagaaaaa ctatcagcag atggacaccg
    11701 tgttattgtt gctggattag atatggattt taggggcgaa ccgttcgaac caatgcctaa
    11761 attgatggct gtcagtgaac aagtaacgaa acttcaagca gtttgtgctg tttgtggttc
    11821 ttcatctagt agaacgcaac gattaataaa tggtaaacca gctaaaatcg atgatccgat
    11881 tatcttagta ggtgccaatg aaagttatga gccacgttgt cgcgcgcacc atatcgtagc
    11941 acctagtgat aataataagg aggaattata agtgtttgat caattagata ttgtagaaga
    12001 aagatacgaa cagttaaatg aactgttaag tgacccagat gttgtaaatg attcagataa
    12061 attacgtaaa tattctaaag agcaagctga tttacaaaaa actgtagatg tttatcgtaa
    12121 ctataaagct aaaaaagaag aattagctga tattgaagaa atgttaagtg agactgatga
    12181 taaagaagaa gtagaaatgt taaaagagga gagtaatggt attaaagctg aacttccaaa
    12241 tcttgaagaa gagcttaaaa tattattgat tcctaaagat cctaatgatg acaaagacgt
    12301 tattgtagaa ataagagcag cagcaggtgg tgatgaggct gcgatttttg ctggtgattt
    12361 aatgcgtatg tattcaaagt atgctgaatc acaaggattc aaaactgaaa tagtagaagc
    12421 gtctgaaagt gaccatggtg gttacaaaga aattagtttc tcagtttctg gtaatggcgc
    12481 gtatagtaaa ttgaaatttg aaaatggtgc gcaccgcgtt caacgtgtac ctgaaacaga
    12541 atcaggtgga cgtattcata cttcaacagc tacagtggca gttttaccag aagttgaaga
    12601 tgtagaaatt gaaattagaa atgaagattt aaaaatcgac acgtatcgtt caagtggtgc
    12661 gggtggtcag cacgtaaaca caactgactc tgcagtacgt attacccatt taccaactgg
    12721 tgtcattgca acatcttctg agaagtctca aattcaaaac cgtgaaaaag caatgaaagt
    12781 gttaaaagca cgtttatacg atatgaaagt tcaagaagaa caacaaaagt atgcgtcaca
    12841 acgtaaatca gcagtcggta ctggtgatcg ttcagaacgt attcgaactt ataattatcc
    12901 acaaagccgt gtaacagacc atcgtatagg tctaacgctt caaaaattag ggcaaattat
    12961 ggaaggccat ttagaagaaa ttatagatgc actgacttta tcagagcaga cagataaatt
    13021 gaaagaactt aataatggtg aattataaag aaaagttaga tgaagcaatt catttaacac
    13081 aacaaaaagg gtttgaacaa acacgagctg aatggttaat gttagatgta tttcaatgga
    13141 cgcgtacgga ctttgtagtc cacatgcatg atgatatgcc gaaagcgatg attatgaagt
    13201 tcgacttagc attacaacgt atgttattag gagagcctat acagtatata gttggctttg
    13261 cctcatttta tggtagaacg tttgatgtaa actcaaattg tttgatacca agacctgaaa
    13321 ccgaagaagt aatgttgcat ttcttacaac agttagaaga tgatgcaaca atcgtagata
    13381 tcggaacggg tagtggtgta cttgcaatta ctttgaaatg tgaaaagccg gatttaaatg
    13441 ttattgctac tgatatttca cttgaagcaa tgaatatggc tcgtaataat gctgagaagc
    13501 atcaatcaca aatacaattt ttaacagggg atgcattaaa gcccttaatt aatgaaggta
    13561 tcaagttgaa cggcttgata tctaatccac catatataga tgaaaaagat atggttacga
    13621 tgtctccaac ggttacgaga ttcgaaccac atcaggcatt gtttgcagat aaccatggat
    13681 atgctattta tgaatcaatc attgaagatt tacctcacgt tatggaaaaa ggcagcccag
    13741 ttgtttttga aattggttac aatcaaggtg aggcacttaa atcaataatt ttaaataaat
    13801 ttcctgacaa aaaaatcgac attattaaag atataaatgg ccacgatcga atcgtctcat
    13861 ttaaatggta attagaagtt atgcctttgc tatgattagt taagtgcata gctttttgct
    13921 ttatattatg ataaataaga aaggcgtgat taagttggat actaaaattt gggatgttag
    13981 agaatataat gaagatttac agcaatatcc taaaattaat gaaataaaag acattgtttt
    14041 aaacggtggt ttaataggtt taccaactga aacagtttat ggacttgcag caaatgcgac
    14101 agatgaagaa gctgtagcta aaatatatga agctaaaggc cgtccatctg ataatccgct
    14161 tattgttcat atacacagta aagatcaatt aaaagatttt acatatattt tagatgcacc
    14221 cgtagaaaag ttaatgcagg cattctggcc gggccctatt tcgtttatat tgccgttaaa
    14281 gccaggctat ctatgtcgaa aagtttctgg aggtttatca tcagttgctg ttagaatgcc
    14341 aagccattct gtaggtagac aattattaca aatcataaat gaacctctag ctgctccaag
    14401 tgctaattta agtggtagac cttcaccaac aactttcaat catgtatatc aagatttgaa
    14461 tggccgtata gatggtatcg ttcaagctga acaaagtgaa gaaggattag aaagtacggt
    14521 tttagattgc acatcttttc cttataaaat tgcaagacct ggttctataa cagcagcaat
    14581 gattacagat atacttccga atagtatcac ccatgctgat tataatgata ctgaacagcc
    14641 aattgcacca ggtatgaagt ataagcatta ctcacccaat acaccactta caattattac
    14701 agatattgag agcaaaattg gaaatgacgg taaagattgg tcttctatag cttttattgt
    14761 gccgagtaat aaggtggcgt ttataccaag tgaagcgcaa ttcattcaat tgtgtcagga
    14821 tgacaatgat gttaaacaag caagtcataa tctttatgat gtgttacatt cacttgatga
    14881 aaatgaaaat atttcagcgg cgtatatata cggctttgag ctgaatgata atacagaagc
    14941 aattatgaat cgcatgttaa aagctgcagg taatcacatt gttaaagggt gtgaactatg
    15001 aagattttat tcgtttgtac aggtaacaca tgtcgtagcc cattagcgga aagtattgca
    15061 aaagaggtta tgccaaatca tcaatttgaa tcaagaggta tattcgctgt gaacaatcaa
    15121 ggtgtttcga attatgttga agacatagtt gaagaacatc atttagctga aacgacctta
    15181 tcgcaacaat ttactgaagc agatttgaaa gcagatatta ttttgacgat gtcgtattcg
    15241 cacaaagaat taatagaggc acaatttggt ttgcaaaatc atgttttcac attgcatgaa
    15301 tatgtaaaag aagcaggaga agttatagat ccatacggtg gaacaaaaga aatgtatgta
    15361 catacctatg aagaacttgt gagtttaatt ttaaaattaa aagatattat ttgctagtag
    15421 gaattctgta taattagtat atgttaacag ttaaataagt tataatagag gagtgtagca
    15481 ctttgctata ttcctttttt atttttagga agggtgggct tttatgaaag atttgacaat
    15541 gttattagac gaattaaaag atatgtcctt ttttaacaaa ggagatatat gtttaattgg
    15601 atgttcaaca tcggaagtca ttggcgaaaa aattgggact gtcggttcga tggaagttgc
    15661 agaaactatt tttaatgcat tagatgttgt gagtaaagag acaggcgtta cttttgcttt
    15721 tcaaggatgt gaacatatca acagagcgat aacaatagaa aaatctcagt ataatccatt
    15781 aacaatggaa gaagtttccg tcgttccaaa tgtacatgct ggagggagtt tggcaacata
    15841 cgcttttcag catatgaagg atccgatcgt ggtcgaacat attactgttc cttgtggaat
    15901 tgatattggt caaacattaa taggcatgca tattaaacat gtatgtgtac ctgtaaggac
    15961 ctcagtaaag caagtaggac aggcaattgt aactattgcc acatctaggc cgaaaaagat
    16021 tggtggcgaa cgtgctaaat accaataagt ttttttgaaa gaaggggaga ttttatgtct
    16081 tatatcacca agcaagataa agttatcgca gaagcaatcg agagagaatt tcagagacaa
    16141 aatagcaaca tagagttaat cgcatcggaa aattttgtat cggaagcggt tatggaagca
    16201 caaggttcag tgttgactaa taagtatgct gaaggctatc caggacgccg atattatggt
    16261 ggctgtgagt ttgtagatgt tactgaaagc atcgcaatta atcgtgcaaa agcattgttt
    16321 ggagctgaac atgtcaatgt tcaaccacat tcaggttcgc aagcgaacat ggctgtttac
    16381 ttagttgcat tagaaatggg cgacacggtt ttaggtatga atttgagtca tggtggtcac
    16441 ttgacacatg gagcgcctgt taattttagt ggtaaattct acaatttcgt tgaatatgga
    16501 gtagataaag acacagaacg aatcaattat gatgaagttc gtaaattagc gttagagcat
    16561 aagcctaagc ttattgtggc aggagcatca gcatattcaa gaacaattga cttcaaaaag
    16621 tttaaagaaa tcgcagatga agtaaacgct aagttaatgg tagacatggc acatattgca
    16681 ggattagtag cggcaggttt acatccaaat ccagtagaat atgctgattt tgtaacaact
    16741 acaacacaca aaacattacg cggaccacgt ggtggtatga ttttatgtaa ggaagaatat
    16801 aaaaaagaca tagataaaac aattttccct ggtattcaag gtggacctct tgagcatgtt
    16861 attgcagcaa aagcagttgc ttttggagaa gcgttagaaa ataatttcaa aacgtatcaa
    16921 caacaagtgg ttaaaaacgc aaaagttctt gcagaagcat taattaatga aggatttaga
    16981 attgtttctg gcggtacaga taatcactta gtagctgttg atgtaaaagg gtctatagga
    17041 cttactggta aagaagctga agagacttta gattcagttg gtatcacatg taacaaaaat
    17101 accattccgt tcgatcaaga aaaacctttt gtaacgagtg gtatacgttt aggtacacct
    17161 gctgcaacaa cgcgtggatt tgatgaaaaa gcttttgagg aagttgcaaa aatcatcagt
    17221 ttagcattga aaaatagtaa agatgaagaa aaattacaac aagctaaaga acgcgttgcg
    17281 aaattaacag ctgaatatcc tctatatcaa taaacataca caaagatagg agtaattttt
    17341 atgagtaaag tacacgtttt cgatcatcca ttaattcaac acaaactaag ctatattaga
    17401 gatgtaaata caggtactaa agaatttaga gaacttgtag acgaagttgg tatgttgatg
    17461 gcatatgaag taactagaga cttagagctt caggatgttg atattgaaac gcctgtaact
    17521 aaaatgacgg ctaaacgatt agctggtaaa aaattagcta tcgttccaat tttaagagct
    17581 ggtttaggta tgactgatgg tattttaagt ttagtgcctg cagccagagt tggacatatc
    17641 ggtttgtatc gagatcccga aacattaaag gctgtagagt attttgctaa gttacctcaa
    17701 gatattactg aaagacaaat cattgttgtt gatcctatgt tagcaacagg cgcatcagca
    17761 attgaagcta ttacttcatt gaagaaacgt ggcgctaaaa atattcgctt catgtgttta
    17821 attgcagcac cagaaggcgt agaaaagatg catgaagcac atccagatgt agatatttat
    17881 attgctgcac ttgatgaaaa gctaaatgat aaagcatata tcacaccagg gttaggcgac
    17941 gctggagata gattgtttgg tactaaatag aagaatcgga gataagtagt ttgatgaaaa
    18001 agattatgac catatttgga acaagacccg aagccataaa gatggctcct ttagttaaag
    18061 ctttggaaca agaaaaaatg ctcgagccaa ttgttgttgt tacagcacag catagagaaa
    18121 tgcttgattc agtattaagt acctttgaaa tcaaaccaaa atacgatttg aatattatga
    18181 aatcaggaca gacactttct gagataactt ctaaatcaat cactcaatta gaacaagtga
    18241 ttcaattaga aaaaccagat atggtacttg tacatggtga tacgatgacg acatttgcag
    18301 gtggtttagc ggcattttat aaccaagtgc cgattggaca cgttgaagca gggcttagaa
    18361 gttatgataa atattcacct tttccagaag aggtgaatag acaattagtt ggtgtattag
    18421 ctgacttaca ttttgcacct actaaaaatg ctgcatcgca tttgttaagt gaagggaaat
    18481 attcagaaag tgttgttgtc actggtaata cagcgattga tgctatgaaa tatacagttg
    18541 atgacaatta taaatctaac atcatggata aatatcatga caaaaaattc attcttatga
    18601 cagcacaccg acgagaaaat atcgggcaac ccatggaaaa tatatttaaa gcggttagac
    18661 gcttaataga tgagtatact gatttagcac tagtatatcc aatgcataaa aacccgaaag
    18721 ttcgagaggt ggctcaaaag attttaggta gtcatgacag aattgaattg attgaacctt
    18781 tggatgtagt agatttccat aattttgcta aaaaatctta ttttattttg acagattcag
    18841 gtggaattca ggaagaagcg ccatcattta ataagccagt tttagttttg cgaagcgtta
    18901 cagaacgtcc tgaaggtgtt gaagctggca cattaaaagt cattggaaca aataagcaaa
    18961 atgtgtatca agctgcaaaa gaattaatcg atgatgagag attatatcat caaatgtctg
    19021 aagcatctaa tccttacggt gatggatttg cttcagaaag aatagttaat catattaagt
    19081 attatttgaa tttaatcact gaaaaaccaa gcgatttcta agaaaaatag actttttgtc
    19141 taattgtgtc taaattgtgt ctgaacatgc ttattttttt acaacaattt gaatagaatt
    19201 gacaccacaa atcgcctata ttatcattta gtttgtatga gtggaacggt tttcatgatt
    19261 gatatcagtc acacggaggc atataaaatg agtcgtttct acaacatttt taaacagttc
    19321 attcaatatt atttgtattt attaataata ttgggaggat tatacctttt tacacaccat
    19381 gcatttatct taggattaat cattggtgtt actggttctg caatcaatac tgttatattt
    19441 gagagctact tagccaaagc taaaagacca gacactatgc atatttcaac tggaaatatg
    19501 tggcgatact tagttgcaat tattgcctgt atgatttggt actttaataa atcgcatgta
    19561 agtataatcg gtataattat tggtttaatg atttcatatg ttgtagttat catacgtcct
    19621 ttactaaagg tgagcaaata aattaagaaa gaggtgagat tatggatcac aaatccccgc
    19681 tcgtgagttg gaatttattc ggttttgata tcgttttcaa tttatcaagt atattgatga
    19741 tacttgttac ggcgtttctt gtttttctac ttgctatcat ttgtacgcgt aatttgaaaa
    19801 aaagaccaac tggcaaacaa aatttcgttg aatggatttt tgatttcgtg aggggaatca
    19861 ttgaaggtaa catggcttgg aaaaaaggtg gtcaattcca cttcttagca gtaacgctga
    19921 ttctgtacat ttttatagct aatatgttag gtcttccgtt ttctatagta acgaaagatc
    19981 acacattgtg gtggaaatca ccaacagctg atgcaacagt gactttaacg ttgtctacaa
    20041 cgataatact gttaactcac ttttatggaa ttaaaatgcg tggtacgaaa caatatctta
    20101 aaggttatgt acagccgttt tggccattgg caattattaa tgtttttgaa gagttcactt
    20161 caacattaac gcttggtctg cgtttgtacg gtaacatatt tgcaggtgag atactattaa
    20221 cattacttgc tggcttattc tttaacgaac cagcatgggg ttggattata agtatcccag
    20281 gattaattgt ttggcaagca ttttcaatat ttgtaggaac aatccaagca tatatcttta
    20341 ttatgctttc gatggtttat atgtcacata aagtggcaga tgaacactaa aaaatttcaa
    20401 taattatata caatcacagg aggaaattaa attatgaatt taatcgcagc agcaatcgca
    20461 attggtttat cagcattagg agcaggtatc ggtaacggtt taatcgtttc aagaacagtt
    20521 gaaggtgtag cacgtcaacc agaagcacgt ggtcaattaa tgggtatcat gttcattggt
    20581 gtaggtttag ttgaggcatt acctatcatc ggtgtagtaa ttgcattcat gacatttgct
    20641 ggataattaa cagataaaag aggtcgggac aaagcgcata ggacataatt catgacgcat
    20701 atatagtaat atctttgaac tttattaaat agttgagata tgaacgcacc atgcctatcg
    20761 cataaattca gtaggtccta acctcgtcgt ttttttctat ataacactag cgattatttt
    20821 aatgaaagga gtgtcatgaa cccgtgactg aaacagctaa cttattcgtt cttggtgcag
    20881 ctggaggcgt tgagtggggt actgtgattg tacaggtcct aactttcatc gtgttacttg
    20941 cgttacttaa aaagttcgca tggggtccat tgaaagatgt aatggataaa cgtgaaagag
    21001 atattaacag agatatcgat gacgcagaac aagctaagtt aaatgcacag aaacttgaag
    21061 aagaaaataa acaaaaactt aaagaaacac aagaagaagt tcaaaagatt ttagaagatg
    21121 ctaaggttca agcacgtcaa cagcaagaac aaattattca tgaagcaaac gtacgtgcaa
    21181 acggtatgat tgaaacagca caaagtgaaa tcaatagcca aaaagaacgt gccattgcag
    21241 atattaataa tcaagtatct gaactatcag tgttaattgc ttctaaagtt cttagaaaag
    21301 aaatttctga acaagaccaa aaagcattgg ttgacaagta tctaaaagag gcaggcgata
    21361 aataatggta aaagtagcta acaagtatgc taaagcatta tttgacgtgt cattagatac
    21421 aaataattta gaaactatta atcaagaatt aacagttata aatgaagcag taaaagataa
    21481 aattgagcaa ttgaaaatgg ttgacagtaa tccaactcaa acagcagaac aacgtcgtga
    21541 gttgattaat ggtgtattta ctgacattaa tccatacatt aaaaatatga tgtacgtttt
    21601 agcagataat agacatatct cattaatagc tgacgtattc aaggcgttcc aaagcttata
    21661 taacggacac tacaatcaag attttgcaac aattgagtca acatatgaat tgagtcaaga
    21721 agagttagat aagattgtca aactagtaac tcaacaaacg aagttatcta aagttattgt
    21781 agatacaaaa attaatccag atttaattgg tggatttaga gttaaagtcg gcacaactgt
    21841 attagatggt agtgttagaa atgatcttgt ccaattacaa agaaaattta gaagagttaa
    21901 ttaattataa agaggagtga catagatggc cataaaagct gaagaaatca gtgcattact
    21961 tcgctcacaa attgaaaatt atgagtcaga aatgtccgta actgatgtag gtactgtatt
    22021 acaaattggt gatggtattg cattaattca cggattaaat gacgttatgg ctggtgagct
    22081 agtagaattc cataacggcg tacttggttt agcccaaaac cttgaagagt caaacgtggg
    22141 tgtggttatt ttaggaccat atacaggtat tactgaaggt gacgaagtta aacgtactgg
    22201 tcgtatcatg gaagtaccag taggtgaaga actaatcgga agagttgtta atccattagg
    22261 acaacctatt gatggacaag gaccgattaa cacaactaaa acacgtccag tagagaaaaa
    22321 agctactggt gtaatggatc gtaaatcagt agatgagcca ttacaaacag gtatcaaagc
    22381 aattgatgct ttagtaccaa ttggtagagg tcaacgtgag ttaatcatcg gtgaccgtca
    22441 aacaggtaaa acaacaattg caattgacac aattttgaac caaaaagatc aaggtacgat
    22501 ttgtatctat gttgctattg gtcaaaaaga ttcaacagta agagcaaatg ttgaaaagtt
    22561 aagacaagca ggcgctttag actacactat tgttgtagca gcatcagctt ctgaaccttc
    22621 tccattatta tatattgcac catattcagg tgtaacaatg ggtgaagaat tcatgtttaa
    22681 cggtaaacat gttttaatcg tttatgatga tttaactaaa caagcagcag cttatcgtga
    22741 gttatcatta ttattacgta gacctccagg tcgtgaagca tacccaggtg acgtattcta
    22801 cttacatagt agattattag aaagagcagc aaaattaaac gatgacttag gtggcggttc
    22861 aattactgca ttaccaatta tcgaaacaca agctggtgat atttcagctt atgtaccaac
    22921 aaacgttatt tcaattacag atggacaaat cttcttacaa tctgatttat tcttctcagg
    22981 tgtaagacca gcgattaatg ccggacaatc tgtatctcgt gttggtggat ctgcacaaat
    23041 taaagcaatg aagaaagttg ctggtacgtt acgtcttgac ttagcgtcat acagagaact
    23101 tgaatcattt gcacaattcg gttcagacct tgatgaattt actgcaagta aattagaacg
    23161 tggtaaacgt actgttgaag tcttaaaaca agatcaaaac aaaccattac cagttgaaca
    23221 tcaagtgttg attatttatg cattaacaaa aggatattta gatgatattc cagttgtaga
    23281 tatcacacgt tttgaagacg agttaaacca ctgggcagaa tcaaatgcta ctgaactgtt
    23341 aaatgaaatc agagaaactg gtggcttacc agatgctgag aagtttgaca cagcaattaa
    23401 cgaattcaaa aaaagcttta gcaaatctga ataataaaca agtttagtat aaggtggtga
    23461 gatagtggct tctcttaaag aaatagatac tcgaataaaa tcaaccaaaa aaatgaagca
    23521 gattacgaaa gcgatgaaca tggtatcaag ttcaaaactt cgtagagctg aaaaaaatac
    23581 aaaacaattc acaccatata tggataaaat gcaagatgca attactgcag ttgcaggggc
    23641 aagtagcaat acaaaccatc caatgctaag acctcgtaaa attactagaa gtggatattt
    23701 agttatcacg agtgataaag gtttagcagg tgcatatagt gcaaacgtgc ttaaaaaatt
    23761 gattactgat attgaagcga aacatcaaga tagtagcgaa tacagtattg tagttttagg
    23821 gcaacaaggt gttgatttcc taaaaaatag aggttatgac attgagtatt ctcaagtaga
    23881 cgtacctgat caaccttctt tcaaatctgt tcaagcacta gctaaccatg ctatagactt
    23941 atacagtgaa gaagaaattg atgaattaaa tatatactat agtcattatg tcagcgttct
    24001 tgaaaacaag cctacatcta gacaagtatt accattatct caagaggatt ctagtaaggg
    24061 acatggtcat ttgtcttctt atgaatttga gccagataaa gaatctatct taagtgtaat
    24121 cttgcctcaa tatgttgaga gtttgattta cggaacaata ttagacgcaa aagcaagtga
    24181 gcatgcaaca cgtatgactg cgatgaaaaa tgccactgat aatgcaactg aacttattga
    24241 tgacttatca ttagaatata acagagcgag acaagctgaa attacgcaac aaattactga
    24301 aattgttggt ggttccgcag cgcttgaata atatttaaag gaggaaaata gcatgggaat
    24361 tggccgtgta actcaagtta tgggtcctgt aattgatgtt cgatttgaac ataacgaagt
    24421 tcctaaaatt aataacgcct tggttattga tgtgcctaaa gaagaaggta caatacaact
    24481 aacattagaa gttgcgctgc aattaggtga cgacgttgtt cgtacaattg cgatggattc
    24541 aactgatggt gtccaaagag gcatggatgt aaaagataca ggcaaagaaa ttagtgtacc
    24601 tgttggtgac gaaacattag gtcgtgtatt taatgtacta ggtgaaacaa ttgaccttaa
    24661 agaagaaatt agtgattctg ttcgccgcga tcctatccat cgtcaagcac cagcattcga
    24721 tgaactttca acagaagttc aaattttaga aacaggtatt aaagtagtag atttactagc
    24781 accttatatt aaaggtggta aaatcggatt gttcggtggt gccggtgtag gtaaaacagt
    24841 attaatccaa gaattaatta acaacatcgc tcaagagcac ggtggtattt ctgtattcgc
    24901 cggtgtaggt gaacgtactc gtgaaggtaa cgatttatac ttcgaaatga gtgacagtgg
    24961 tgtaattaag aaaacagcca tggtattcgg gcaaatgaat gagccacctg gtgcacgtat
    25021 gcgtgttgca ttatctggtt taacaatggc tgaatatttc cgtgacgaac aaggtcaaga
    25081 cgtattatta ttcatcgata acattttcag atttacacaa gctggttctg aggtatctgc
    25141 attattaggt cgtatgcctt ctgcagtagg ttaccaacca acacttgcta ctgaaatggg
    25201 acaattacaa gaacgtatta cgtctacaac aaaaggatca gttacttcta ttcaagcggt
    25261 attcgtacct gccgatgact atactgaccc agctccagcg acagcgtttg cccatttaga
    25321 tgcaactaca aacttagaac gtaaattaac tgaaatgggt atttatccag ccgtggatcc
    25381 attagcgtct acatcaagag cattggaacc atcaattgta ggtcaagaac attatgaagt
    25441 agctcgtgat gtacaatcaa cacttcaaaa ataccgtgaa ttacaagata tcattgctat
    25501 cttaggtatg gacgaattat ctgatgaaga taaacaaaca gttgaacgcg cacgtagaat
    25561 tcaattcttc ttatctcaaa acttccacgt agcggaacaa tttactggtc aaaaaggttc
    25621 ttatgtacct gttaagacaa cagttgcaaa ctttaaagat atcttagatg gtaaatatga
    25681 ccatattcca gaagatgctt tccgtttagt tggtagcatg gatgatgtta ttgcaaaagc
    25741 taaagatatg ggtgttgaag tataacaatt aggaggaatg gataatgaat acattaaacc
    25801 tagatattgt cactcctaat ggttctgttt acaatcgtga taatgttgaa ctcgttgtta
    25861 tgcaaacaac agctggtgag ataggtgtca tgagtggaca tattccaact gtagctgctt
    25921 taaaaacagg ctttgtaaaa gtgaaatttc acgatggaac tgaatatatt gctgtaagcg
    25981 atggctttgt tgaagttaga aaagataaag tttcaatcat tgttcagact gcagaaactg
    26041 caagagaaat tgatgttgaa agagctaaat tagccaaagc aagagcagag tctcacttgg
    26101 aaaatgatga cgacaatact gatattcata gagccgaaag agctttagag agagcaaata
    26161 accgtttgcg tgtggctgaa ttaaaatagt aaataaaggg tcgaagatgt gatttcatat
    26221 cttcgaccct tttttgaatt atattgattt aaagatacaa aacatgagag ggggaaggaa
    26281 ttgataaaga accattaaag atttatgatg tagtggttct ttatcattaa acacagctaa
    26341 tgtgtattta aaaataggaa tacatgagta aaactcatgt ataagaaata ctaatttcta
    26401 aagaaaaagt atttctttat gttggggccc accccaactt gcattgtctg tataaattgg
    26461 tgttccaatt tctttatgtt ggggccccac ccccaacttg cacattaatg taagctgact
    26521 ttccgccagc ttctgtgttg gggccccgca aactactgcc aaatataaca ctatagagtc
    26581 tagacgttga tttatgtccg actcccaaaa atagttttac tttttacaat cactactaga
    26641 ttgctaaaat caaaatttcc ttcaccacta tctacagtcg acatttcatt ttttgaaagt
    26701 agctacattt tttcatgcca agatacttta tagttatgat atttatgtaa aaagaattat
    26761 atagtaagtt agcttaaact ttactaaaaa cgggtattaa actttgtatc attatttaaa
    26821 tttttcatgt acaatgtaat acagtaatct tatgaggtga taaaatggat tatatcggac
    26881 aatatgcagt tatccattta gtgttacatg ttgtatgtat ttgtattgcc tattgggctt
    26941 tacaatcaat tagattagat caatttttta aaaagggata cgccactcaa ttacaagtgt
    27001 gtatgatatt tgttgctatt ttattaggca ctgcagtaag caattttatt gtagatttgt
    27061 tacaatactc gacgcaggta aaatatttaa taaaataagt ctaactctat gatttgtaat
    27121 caaaactaga tataattaaa taatgactta aaataatttt aaaataggga aatgtaaagt
    27181 aataggagtt ctaagtggag gatttacgat ggataaaata gtaatcaaag gtggaaataa
    27241 attaacgggt gaagttaaag tagaaggtgc taaaaatgca gtattaccaa tattgacagc
    27301 atctttatta gcttctgata aaccgagtaa attagttaat gttccagctt taagtgatgt
    27361 agaaacaata aataatgtat taacaacttt aaatgctgac gttacataca aaaaggacga
    27421 aaatgctgtt gtcgttgatg caacaaagac tctaaatgaa gaggcaccat atgaatatgt
    27481 tagtaaaatg cgtgcaagta ttttagttat gggacctctt ttagcaagac taggacatgc
    27541 tattgttgca ttgcctggtg gttgtgcaat tggaagtaga ccgattgagc aacacattaa
    27601 aggttttgaa gctttaggcg cagaaattca tcttgaaaat ggtaatattt atgctaatgc
    27661 taaagatgga ttaaaaggta catcaattca tttagatttt ccaagtgtag gagcaacaca
    27721 aaatattatt atggcagcat cattagctaa gggtaagact ttaattgaaa atgcagctaa
    27781 agaacctgaa attgtcgatt tagcaaacta cattaatgaa atgggtggta gaattactgg
    27841 tgctggtaca gacacaatta caatcaatgg tgtagaatca ttacatggtg tagaacatgc
    27901 tatcattcca gatagaattg aagcaggcac attactaatc gctggtgcta taacacgtgg
    27961 tgatattttt gtacgtggtg caatcaaaga acatatggcg agtttagtct ataaactaga
    28021 agaaatgggc gttgaattgg actatcaaga agatggtatt cgtgtacgtg ctgaagggga
    28081 attacaacct gtagacatca aaacactacc acatcctgga ttcccgactg atatgcaatc
    28141 acaaatgatg gcattgttat taacggcaaa tggtcataaa gtcgtaaccg aaactgtttt
    28201 tgaaaaccgt tttatgcatg ttgcagagtt caaacgtatg aatgctaata tcaatgtaga
    28261 aggtcgtagt gctaaacttg aaggtaaaag tcaattgcaa ggtgcacaag ttaaagcgac
    28321 tgatttaaga gcagcagcag ccttaatttt agctggatta gttgctgatg gtaaaacaag
    28381 cgttactgaa ttaacgcacc tagatagagg ctatgttgac ttacacggta aattgaagca
    28441 attaggtgca gacattgaac gtattaacga ttaattcagt aaattaatat aatggaggat
    28501 ttcaaccatg gaaacaattt ttgattataa ccaaattaaa caaattatac ctcacagaca
    28561 gccattttta ttaattgata aagtagttga atatgaagaa ggtcaacgtt gtgtggctat
    28621 taaacaagta tcaggaaacg aaccattctt tcaagggcat tttcctgagt atgcggtaat
    28681 gccaggcgta ttaattactg aagcgttagc tcaaacaggt gcggtagcta ttttaaatag
    28741 tgaagaaaat aaaggtaaaa tcgctttatt tgctggtatt gataaatgtc gttttaaacg
    28801 tcaagtagta cctggtgata ctttaacgtt ggaagtagaa atcactaaaa ttaaaggacc
    28861 aatcggtaaa ggtaatgcta aagctactgt cgatggtcaa cttgcttgta gttgtgaact
    28921 tacatttgca attcaagatg taaaataaaa caaaaaaaca ttcaaagatt taatgtgttg
    28981 gcataatctt tgaatgtttt ttattttact cttctaattt ttcatccttt aactttggtt
    29041 tagactgcat cattcgatta aatgattttt ttaattcttc accagataat ccatcatcaa
    29101 taagttgttc taataaactt tcagcatact gttgacgtaa agtgtaaata tgacattcaa
    29161 atacgataga cattgttgtt ttaaaatttt taatactttt cacagtagat tcaaataaag
    29221 ctggatcatt ggctggacgc gtgatgacga cacgaatatc caataactgt tcactgtctt
    29281 gatattcctt aaatgtttca taatgctcat tagaaatgac aatttcaagc aaccaacccg
    29341 tgccactttc ctctttatta attattacgc catcttctaa ttcatattct ataattctgc
    29401 cgtgttcatt cacaatttga aaccttactg ctttaaaagt tttcatattc ccacatccca
    29461 ttagtttaat atttatgatt tttgaattat ttagaagatt taaggtcatt tcatgactaa
    29521 tttctttaaa tataacaaat aacgagatgc tatagctatt aattatataa aatttgccat
    29581 tttgaccatt tttaagctag taattaagat ataggcatag gaggtgaatc acacactaca
    29641 tgctaaataa aatcgtaatt gtcgggagac tgacgaaaga cgcacaaata tttgaaaagg
    29701 aggatagaaa aattgcaacg ttttgtgttg caacgcaccg aaattataaa gatgaaaatg
    29761 gagaaatcgt ctgtgattac ttattctgta aagcatttgg caagttagct tctaatatag
    29821 aaaaatatac taatcaaggt acattggttg gtataactgg tcaaatgaga tcaagaaagt
    29881 atgataaaga cggacaaaca cactttgtca ctgaattata tgttgaaaca ataaaattta
    29941 tgtcccctaa atcccaaaat aatgaaattc tctcagatag tattttagat attgactctc
    30001 aaaatataga taatcatgac ttattagaaa tttaaatcca attatcctaa acatccttaa
    30061 tatacattta atccatccta aattttttat agatctaatt aacttgaaat atactcactt
    30121 aaaaacgact tacatgacta gtactgttgt gtaggtcgtc tttttgtgta gtttttctaa
    30181 tagaaaatag acttagattg caaaacgatt acataaaaaa ttgcaaatga aaaacatttt
    30241 tactgtcatg acaattctcg atagaatcat atttgaaatt gtgggggatt tcgttgtaat
    30301 cactgtgtaa aaaacaaggc tattttttta ttttgttgta acctgcacgg attttacaga
    30361 tgttacagta gtctctgtaa aacttttaga gaaacaaatt acttgtagga ggattttaag
    30421 attatgaaga aaacattact cgcatcatca ttagcagtag gtttaggaat cgtagcagga
    30481 aatgcaggtc acgaagccca tgcaagtgaa gcggacttaa ataaagcatc tttagcgcaa
    30541 atggcgcaat caaatgatca aacattaaat caaaaaccaa ttgaagctgg cgcttataat
    30601 tatacatttg actatgaagg gtttacttat cactttgaat cagatggtac acactttgct
    30661 tggaattacc atgcaacagg tgctaatgga gcagacatga gtgcacaagc acctgcaact
    30721 aataatgttg caccatcagc tgttcaagct aatcaagtac aatcacaaga agttgaagca
    30781 ccacaaaatg ctcaaactca acaaccacaa gcatcaacat caaacaattc acaagttact
    30841 gcaacaccaa ctgaatcaaa agcatcagaa ggttcatcag taaatgtgaa tgatcatcta
    30901 aaacaaattg ctcaacgtga atcaggtggc aatattcatg ctgtaaatcc aacatcaggt
    30961 gcagctggta agtatcaatt cttacaatca acttgggatt cagtagcacc tgctaaatat
    31021 aaaggtgtat caccagcaaa tgctcctgaa agtgttcaag atgccgcagc agtaaaatta
    31081 tataacactg gtggcgctgg acattgggtt actgcataag ccatttatgc atagctaatc
    31141 aatagttata taagtaactt ttagattgga atatatcggg gaattctcga tatgttccgg
    31201 tcttttttat ttcgcaaata tatgtcatta tagaattatt atttaaagat aataatacaa
    31261 ctgagcaaca ataattgaaa atgttgaaac cgtttgctaa gattaatttg caattgaata
    31321 ctaaggaact actaggggag cctaatgata tggctgagat gaattgttca gacccttatg
    31381 acctgatttg gttagtacca acgtaggaaa gtagttattg aagtgatggg gctagtatag
    31441 caacattgcc atcaaactac tttcatgttg gaagtagttt ttttatttag ggaggatttt
    31501 ttacaatgga attttcacaa aaattgtacc aagctgcaaa gccaatcatt aatgatattt
    31561 atgaggatga ctttattcaa aaaatgttat taggcaatat acaagctgat gcattacgtc
    31621 actatttaca agctgatgca gcttatttaa aagaattcac aaacttatat gctttgttaa
    31681 ttccaaaaat gaatagcatg aatgacgtaa aatttttagt agagcaaata gagtttatgg
    31741 ttgaaggtga agtacttgcg catgatattt tagcgcaaat tgttggtgaa tcatacgaag
    31801 aaatcattaa aacaaaagtt tggcctccaa gtggcgacca ttacagaaaa catatgtatt
    31861 tccaagcgca tagtcgtgaa aatgctattt atacaattgc tgcaatggca ccttgtccat
    31921 atatttatgc agaattagct aagcgctctc aaagtgatca taagcttaat agagaaaaag
    31981 atacggcaaa atggtttgat ttttatagta ctgaaatgga tgacataatt aacgtatttg
    32041 aggcattaat gaataaatta gccgaatcaa tgtctgacaa ggaattggaa caagtaaagc
    32101 aagtattttt agaaagttgc atacatgagc gtcgattttt caatatggct atgacactag
    32161 aacaatggga atttggagga aaagtaaatg attaaaccta aaatagcatt aaccattgca
    32221 ggtactgatc caacaggtgg tgccggcgta atggctgatt taaaatcatt tcattcatgt
    32281 ggtgtatatg gtatgggcgt cgttacaagt attgttgctc aaaatacatt gggcgtacaa
    32341 catattcata atttaaatca tcaatgggta gatgaacaac ttgatagtgt cttcaacgat
    32401 accttaccgc atgctattaa aacggggatg attgctacag cagatactat ggaaacgatt
    32461 cgtcattatt taatgcaaca tgaatctatt ccatatgtaa ttgatcctgt tatgttggcg
    32521 aaaagcggtg attcattaat ggataatgac acaaagcaaa acttgcagca tacgttattg
    32581 ccattagctg acgtagtaac accgaattta ccagaagctg aagaaataac gggactaacc
    32641 attgatagtg aagaaaaaat tatgcaggct ggccgcatct ttattaatga gattggtagt
    32701 aaaggtgtca tcattaaagg cggtcattca aatgatactg atatagcaaa agattattta
    32761 tttactaacg aaggtgttca aacatttgaa aatgaacgat ttaaaacaaa acatacgcat
    32821 ggaacagggt gtacattttc agcagttata acggcagaac ttgcaaaagg tagaccatta
    32881 tttgaggctg tacacaaggc taaaaagttt atttcaatga gtatacaata tacgcctgaa
    32941 atcggccgtg gtagaggtcc agtgaatcat tttgcatatt taaagaaaga gggattagac
    33001 gatgaattat ctaaataaaa tacgtattga aaacccatta acaatttgtt atacaaacga
    33061 tgtagttaaa aattttacag cgaatggttt attaagtatt ggtgctagcc ctgcaatgag
    33121 tgaagctccc gaagaagctg aagaatttta caaagttgca caagcgctat taatcaatat
    33181 cggtacttta acagcagaaa atgaacaaga tattattgcg attgctcaaa cggcaaatga
    33241 ggcaggctta cctattgtat ttgaccctgt agctgttggt gcttctacat atcgaaagca
    33301 attttgtaaa ttattattga aatcagcgaa agtatcagta attaaaggca atgcatctga
    33361 aatattagcg ttgattgatg atacagcaac tatgaaaggt acagatagtg atgctaatct
    33421 tgatgcggtt acaatagcga aaaaggctta cgcaacatat aaaactgcaa tagtaatcac
    33481 aggtaaagag gacgttattg ttcaagataa taaagccatc gtattagcta atggatctcc
    33541 attattagca cgagtaactg gagctggttg tttattagga ggcgttattg ctggattttt
    33601 atttagagaa acagaaccag acatagaagc gttaattgaa gcggtaagcg tatttaatat
    33661 tgctgctgag gtagctgctg aaaatgaaaa ttgtggtggt cctggtacgt tttcaccatt
    33721 gttgcttgat acgttatatc atttaaatga aacaacctat caacaacgga ttcgtattca
    33781 agaggtggaa taatatgttt aaccaatcgt atctaaatgt gtattttatt tgtgggacct
    33841 ccgatgttcc gagtcatcga actattcatg aagtattaga agcagcatta aaggcaggga
    33901 ttacactttt ccaatttcga gaaaagggtg aatcagcttt aaaaggaaac gataaacttg
    33961 tattagctaa agaattacag catctctgtc atcaatatga tgtgcctttt atcgttaatg
    34021 atgatgtatc cttggcaaaa gaaattaacg cggatggtat acatgtcggt caagatgatg
    34081 cgaaagtcaa agagatagca caatatttca ctgataaaat tattggactt agtattagtg
    34141 atttagatga gtatgcaaaa tctgatttaa ctcatgttga ttatataggt gttggaccaa
    34201 tctatcctac gccgtcgaag catgacgcgc atataccagt aggtccagaa atgattgcaa
    34261 cgtttaaaga aatgaatccg caactaccga ttgtagctat tggcggtatc aatactaata
    34321 atgtggcgcc gattgtagaa gcaggtgcca atggaatttc agtcatttca gccatttcta
    34381 aaagtgaaaa tattgaaaag actgttaatc gattcaaaga tttttttaat aattagttaa
    34441 atttttccac ttattgtttc atacgtactc attaatgtga tagaataaat cctatgtgaa
    34501 tataatgata gaggtggaaa aatgaagaaa aaagcgttac taccattatt tttaggtatt
    34561 atggtctttt tggctggttg tgactattct aaacctgaaa aacgtagtgg gtttttctac
    34621 aatacattcg tagatccaat gaaaaatgta ttggattggt tgggaaataa cttattaaac
    34681 gacaattatg gtttagctat tattatcctt gtattggtaa ttcgtattat tttattacca
    34741 ttcatgttgt caaactataa aaatagtcat atgatgcgtc aaaaaatgaa agttgcaaag
    34801 ccagaagttg aaaaaattca agaaaaagtg aaacgtgcgc gtacacaaga agaaaaaatg
    34861 gctgcaaacc aagaattaat gcaagtatat aaaaagtatg acatgaaccc gattaagagt
    34921 atgttgggtt gtttaccaat gctaatccaa ttgccaatca tcatgggatt atactttgta
    34981 cttaaagacc aacttgtaga tggtttgttt aaatatccac acttcttatg gttcgattta
    35041 ggacgtcctg atatttggat tacaattatt gccggtgttt tatactttat ccaagcatat
    35101 gtatcaagta aaacgatgcc agacgaacaa cgtcaaatgg gttacatgat gatggtcatt
    35161 tcaccaatta tgattatctg gatttcatta agctcagcat cagcacttgg tttgtactgg
    35221 tcagtcagtg cggcgttcct tgtagttcaa acacactttg cgaacattta ttatgaaaaa
    35281 gtcgctaaaa aagaagtaca acctttcatt gaagcgtatg aaagagagca caacggcggc
    35341 agcaataaaa aaggcaaaaa cacacaagta gtgtctaaaa agaaaaagaa ataaccttag
    35401 caagtccaaa taatgtgcac cctaaaagtt gaagataatt ttaactttat agggcgcaca
    35461 ttatttttcg cttcaatagc gaaacttagt gtcacattat acaatatgtc ataaatagaa
    35521 acagcagtaa gatgatttca aatgtgaaag tcatcctact gctgttttta tttgaaataa
    35581 tattaacgag atttcagtat gtaaaaagtg gttaataaca gagttgtcat tcttcatcgc
    35641 aatgtcatct tgacacaatg attcatcagt gtagaagtat atgtcgtaac gcaacatgtc
    35701 cacagcaatt cactaatgca tgtaacagtg tgaaataata acgtcacaac ggcataatac
    35761 acattgcaac gtcccaacaa catatcatag aatcgtaacg gcatggcatc aacaccaagc
    35821 tcccacaaca atacgccatt acatcgcatc atcatactac aactccaatg tctagtcgtg
    35881 ataattccat tccgtaaaaa actgtttcaa gtacatcatc ataaagtctt gacgttcttt
    35941 agcaatcatc ttcgccgtat ctgtatgcat taaagattct aacttaagta atttttcaaa
    36001 gaaatgttta attgcagatg gtggcaactg ttcaactaaa tcatcattaa tcttatctag
    36061 tgacatatgt tctgtccaca taggttcacc aaagtgtcct gcaaattgaa atgttcgtgc
    36121 aacacctata gcgcctatag catcaagacg atctgcatcc ctgacaattt gaccttctaa
    36181 agataaagtg acatgatcgt ttttaccatt gcgatagctc atattattaa taataaataa
    36241 aatgtgctct tgatcttcgg ttgatagtga taaagaagat aaaaatgact tcaattcaac
    36301 atattgtttg ttagcatcta caactttttc gtcaacggta tcatgaagca aacatgcgag
    36361 ttcaatgact aaagtatcat taacaccttc attttcagcg attgatttag ctaaagcagt
    36421 gacacgatat acatgcgcaa tatcatggcc tgtataatca ttttgatgaa tagattccat
    36481 atattttttg gctgcactaa tgatgtctga ttgttgcatt aaagttacac tccccatatt
    36541 tctattttat aagataggtg acaataattg tgaaatacct tctttaaatt taatccaaag
    36601 acttcgctta gcataacgtt cttttgttaa ttcagaagat actgctaaat catctataaa
    36661 agcttgtttt aattttttgg caatttgttg gtcataaata aaggcgttga cttcgaaatt
    36721 caatgtgaaa ctgcgatggt ccatattagc tgttccaaca cttgcaattt catcatctat
    36781 aacaagtgtt tttgagtgta aaaagccatt gtcgtagtga aatactttaa caccggcatc
    36841 taataaggat gctgcatttt ttaaagtagc ccaaaaaaca aacggatggt caggtttatt
    36901 aggaatcatg atattgacat caacaccacc taatgccgca attttaatag aatctaaaaa
    36961 ggcttgatca ggtatgaaat agggagattg aatataaatc gattttttag cagatgaaat
    37021 cattttcaaa taaccgtatt taatctgttc ccattcttcg tcaggaccac tagaagctat
    37081 ttgaacgcca attgttccac cagaatttac atctgggaaa taacgatcat cataggagat
    37141 gtggtcacgt gtggcttgtg aattccaatc tagaataaat cgtaattgca atgcatttac
    37201 tgcatccccg acaattcgta aatgcgtatc tcgccaatag ccgaattttt ttgatttacc
    37261 taagtactca tcaccaacat taaaaccacc aacatatcca atttgcccat ctataacaac
    37321 aatttttcga tggtttcgat tgttcatacg caagttaatt aaaggtaatt ttgatgggaa
    37381 aaatgcttca gcatgtccgc ctttattgcg aaacgggcgt aagccttttt tacgcagtcc
    37441 acgagaaccc atgtcatcat aaagaatttt aacttctaca ccttgttccg cttttttacc
    37501 aagttcattt aaaatggtac gacctaattc atcattttga ataatatagt actgaaaatg
    37561 aatataatca gtagcattac ggatgtcttg tattaagtca tcaaattttt cttggccgtc
    37621 tgtgtatatt tttaaatcgt tgtctgtt
//
LOCUS       DAKPJH010000012        37298 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.012, whole genome shotgun sequence.
ACCESSION   DAKPJH010000012 DAKPJH010000000
VERSION     DAKPJH010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 37298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37298
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.012"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            13..966
                     /locus_tag="OY092_000511"
     CDS             13..966
                     /locus_tag="OY092_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075484.1"
                     /translation="MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKES
                     EEEKDPDLEKFEEIEKKMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKV
                     ELADYRFTKDSKGSSIKDVDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNS
                     NTPVFYAEIMTKYKDGKLVYASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKP
                     VPYSVAQIKSFGVPLTSVSFMTHGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLN
                     LVHMDFLNASSDFGNAHFVVLSKYIKEYESNYETASDDSLK"
     gene            complement(1129..1332)
                     /locus_tag="OY092_000512"
     CDS             complement(1129..1332)
                     /locus_tag="OY092_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HCX1075485.1"
                     /translation="MQVNKVIYILLALFLGSFGIHKFYAGKNMQGFLHLIFFWTVIPH
                     ILAIISAIITVFKPADEHGNVTL"
     gene            1631..2119
                     /locus_tag="OY092_000513"
     CDS             1631..2119
                     /locus_tag="OY092_000513"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HCX1075486.1"
                     /translation="MAIKKLVPASHPILTKKAQAVIKFDDSLKRLLQDLEDTMYAQEA
                     AGLCAPQINQSLQVAIIDMEMEGLLQLVNPKIISQSNETITDLEGSITLPDVYGEVTR
                     SKMIVVESYDVNGNKVELTAHEDVARMILHIIDQMNGIPFTERADRILTDKEVEAYFI
                     ND"
     gene            2112..3047
                     /locus_tag="OY092_000514"
     CDS             2112..3047
                     /locus_tag="OY092_000514"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HCX1075487.1"
                     /translation="MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMT
                     PPPVKKVAMKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLG
                     AINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDN
                     VGTMHDKLSVLGADLLKETLPSIIEGTNESVPQDDAQATFASNIRREDERISWNKPGR
                     QVFNQIRGLSPWPVAYTTMDDTNLKIYDAELVETNKINEPGTIIETTKKAIIVATNDN
                     EAVAIKDMQLAAKKRMLAANYLSGAQNTLVGKKLI"
     gene            3044..4351
                     /gene="rsmB"
                     /locus_tag="OY092_000515"
     CDS             3044..4351
                     /gene="rsmB"
                     /locus_tag="OY092_000515"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HCX1075488.1"
                     /translation="MIENVRSLAFDTIQDILNEGAYSNLRINEVLSENELNAMDKALF
                     TEIVYGTVKRKYTLDFYLKPFVKTKIKAWVRQLLWMSIYQYVYLDKVPNHAIINEAVE
                     IAKERGGYHNGNVVNGILRTMMRSDLPDFNEIADPKKRMAIEYSMPKWIIDHWATHYG
                     LEETETILQSFLETTSTTVRANLTRASLDDIIEKLQDEGYDVEKDHDLPYCLHIGGQP
                     IIHSRSFKDGFVSIQDKSSMFVAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQV
                     DASDIHDHKIDLINFNIKKLRLTNIKAFQHDATKPYDKTYDKILVDAPCSGLGVMRHK
                     PEIKYTQSKQHIESLVDLQLEILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKN
                     NKNFEFEPFQHPITGELVKTLQIMPQDFNSDGFFITKIKRKDN"
     gene            4354..5448
                     /gene="rlmN"
                     /locus_tag="OY092_000516"
     CDS             4354..5448
                     /gene="rlmN"
                     /locus_tag="OY092_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002435140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HCX1075489.1"
                     /translation="MITAEKKKKNKFLPNFDKQSIYSLRFDEMQNWLVEQGQQKFRAK
                     QIFEWLYQKRVDSIDEMTNLSKDLRQLLKDNFTVTTLTTVVKQESKDGTIKFLFELQD
                     GYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKA
                     LDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIY
                     EFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYG
                     LFGGVNDQLEHARELAHLIKGLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLG
                     INATIRREQGSDIDAACGQLRAKERQVETR"
     gene            5455..6198
                     /locus_tag="OY092_000517"
     CDS             5455..6198
                     /locus_tag="OY092_000517"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase Stp1"
                     /protein_id="HCX1075490.1"
                     /translation="MLEAQFFTDTGQHRDKNEDAGGIFYNQTNQQLLVLCDGMGGHKA
                     GEVASKFVTDELKSRFEAENLIEQHQAENWLRNNIKDINFQLYHYAQENAEYKGMGTT
                     CVCALVFEKSVVIANVGDSRAYVINSRQIEQITSDHSFVNHLVLTGQITPEEAFTHPQ
                     RNIITKVMGTDKRVSPDLFIKRLNFYDYLLLNSDGLTDYVKDNEIKRLLVKEGTIEDH
                     GNQLMQLALDNHSKDNVTFILAAIEGDKV"
     gene            6195..8189
                     /gene="pknB"
                     /locus_tag="OY092_000518"
     CDS             6195..8189
                     /gene="pknB"
                     /locus_tag="OY092_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase Stk1"
                     /protein_id="HCX1075491.1"
                     /translation="MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIP
                     PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH
                     GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE
                     TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA
                     IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA
                     NEDVYELDKMKTIAVPLKKEDLAKHISEHKSNQPKRETTQVPIVNGPAHHQQFQKPEG
                     TVYEPKPKKKSTRKIVLLSLIFSLLMIALVSFVAMAMFGNKYEETPDVIGKSVKEAEQ
                     IFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGERVERGDSVDVVISKGPEKVKMPNV
                     IGLPKEEALQKLKSLGLKDVTIEKVYNNQAPKEYIANQSVTANTEIAIHDSNIKLYES
                     LGIKQVYVEDFEHKSFSKAKKALEEKGFKVESKEEYSDDIDEGDVISQSPKGKSVDEG
                     STISFVVSKGKKSDSSDVKTTTESVDVPYTGKNDKSQKVKVYIKDKDNDGSTEKGSFD
                     ITSDQRIDIPLRIEKGKTASYIVKVDGKTVAEKEVSYDEV"
     gene            8416..9291
                     /gene="rsgA"
                     /locus_tag="OY092_000519"
     CDS             8416..9291
                     /gene="rsgA"
                     /locus_tag="OY092_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499727.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HCX1075492.1"
                     /translation="MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIV
                     EFDVQNINEGYIHQVYERKNELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHS
                     YQLDARVLVTKKDKTPIEKQLEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLI
                     VLSGQSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGF
                     SALDFDHIDKDEIKDYFLELNRYGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDH
                     YLQLFNEISNRKVRY"
     gene            9292..9936
                     /locus_tag="OY092_000520"
     CDS             9292..9936
                     /locus_tag="OY092_000520"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HCX1075493.1"
                     /translation="MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNI
                     SIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQM
                     IKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNA
                     IKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG"
     gene            9943..10584
                     /locus_tag="OY092_000521"
     CDS             9943..10584
                     /locus_tag="OY092_000521"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HCX1075494.1"
                     /translation="MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFF
                     SVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGR
                     LDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTD
                     DVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDGLILQIRSTDLN"
     gene            complement(10944..11132)
                     /locus_tag="OY092_000522"
     CDS             complement(10944..11132)
                     /locus_tag="OY092_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HCX1075495.1"
                     /translation="MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKP
                     KKVWVSARALKSGKVTRV"
     gene            11575..11949
                     /locus_tag="OY092_000523"
     CDS             11575..11949
                     /locus_tag="OY092_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HCX1075496.1"
                     /translation="MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRD
                     GIAEILGHENYAKGIKVTENNGVVNIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLN
                     VSVNSINIYVQGVRVNNTGKKA"
     gene            11964..13610
                     /gene="fakA"
                     /locus_tag="OY092_000524"
     CDS             11964..13610
                     /gene="fakA"
                     /locus_tag="OY092_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase catalytic subunit FakA"
                     /protein_id="HCX1075497.1"
                     /translation="MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTN
                     MNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESES
                     EINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAVEKANNTEDCIELMEYI
                     IVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKIDKDE
                     FVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDE
                     EIVKVHVHTEHPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETA
                     IITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNIL
                     MASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLT
                     YAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLNEMLAEDSEILTVIIGQ
                     DAEQEVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE"
     gene            13800..15860
                     /gene="recG"
                     /locus_tag="OY092_000525"
     CDS             13800..15860
                     /gene="recG"
                     /locus_tag="OY092_000525"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HCX1075498.1"
                     /translation="MAKVNLIESPYSLLQLKGIGPKKIEALQQLNIHTVEDLVLYLPT
                     RYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFN
                     QPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQTQENADVQLEPVYRIKEG
                     IKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRT
                     YAFTELFLFELRMQWLNRLEKSSDEAIEIDYDLDQVKSFIDRLPFELTEAQKSSVNEI
                     FRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLM
                     ALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITD
                     EQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPII
                     TTWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGV
                     SRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYDADRFGL
                     STLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGD
                     FFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLH
                     RSFD"
     gene            16063..16635
                     /gene="fapR"
                     /locus_tag="OY092_000526"
     CDS             16063..16635
                     /gene="fapR"
                     /locus_tag="OY092_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HCX1075499.1"
                     /translation="MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIR
                     LDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSV
                     FHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQT
                     AKHYYVEVKSYVKHTLVFKGNFKMFYDKRG"
     gene            16640..17626
                     /gene="plsX"
                     /locus_tag="OY092_000527"
     CDS             16640..17626
                     /gene="plsX"
                     /locus_tag="OY092_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HCX1075500.1"
                     /translation="MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYN
                     LNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALM
                     SAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQ
                     KIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNHDHSLNFVGNIEAKTLMDGDTDVV
                     VTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKLAGAILKKDLAEFAKKMDYSEY
                     GGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE"
     gene            17619..18545
                     /gene="fabD"
                     /locus_tag="OY092_000528"
     CDS             17619..18545
                     /gene="fabD"
                     /locus_tag="OY092_000528"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HCX1075501.1"
                     /translation="MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDI
                     LETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVL
                     SFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANIN
                     CPGQIVVSGHKALIEELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFASYINQFE
                     WRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPG
                     KVLSGLIKKINRDVKLTSIQTLEDVKGWNEND"
     gene            18538..19272
                     /gene="fabG"
                     /locus_tag="OY092_000529"
     CDS             18538..19272
                     /gene="fabG"
                     /locus_tag="OY092_000529"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HCX1075502.1"
                     /translation="MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV
                     EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ
                     EWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI
                     GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIAN
                     TVAFLASDKAKYITGQTIHVNGGMYM"
     gene            19707..19940
                     /locus_tag="OY092_000530"
     CDS             19707..19940
                     /locus_tag="OY092_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCX1075503.1"
                     /translation="MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVM
                     ELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK"
     gene            20056..20787
                     /locus_tag="OY092_000531"
     CDS             20056..20787
                     /locus_tag="OY092_000531"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HCX1075504.1"
                     /translation="MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFI
                     NDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIF
                     ANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFP
                     HVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAE
                     GKGKTKKESEQRAAESAYKQLKQIK"
     gene            20934..24500
                     /gene="smc"
                     /locus_tag="OY092_000532"
     CDS             20934..24500
                     /gene="smc"
                     /locus_tag="OY092_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HCX1075505.1"
                     /translation="MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDA
                     IKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVT
                     RRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQ
                     IIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKT
                     LSHQMKHSDIVVTVHDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGK
                     RHQLDNDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLMELLE
                     NISNEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSE
                     QSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELS
                     AVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGV
                     KHILKAKNKELKGIHGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFL
                     KERNLGRATFLPLNVIQSRVVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLG
                     NTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTT
                     MRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLT
                     TQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETHLESIKASLKRLEDEIERYTKLS
                     KEGKESVTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQNQQTKHQLKDVKEKIAF
                     FNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEAKLQVCH
                     QDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKSEYTSDESIDALRKK
                     VKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRKAKETLEQIISEMDQEVT
                     ERFKETFHAIQGHFTAVFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLL
                     SGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVI
                     THRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ"
     gene            24500..25750
                     /gene="ftsY"
                     /locus_tag="OY092_000533"
     CDS             24500..25750
                     /gene="ftsY"
                     /locus_tag="OY092_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HCX1075506.1"
                     /translation="MSFFKRLKDKFATNKENEEVKSLTEEQGQDKLEDTHSEGSTQDV
                     NDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQ
                     LNNLIARYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREV
                     IVEKIVEIYHQEDDNSEAMNLEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVM
                     LAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDT
                     AGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVT
                     GIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQ
                     NEEITTVENDQIVTEEKDDNHGAK"
     gene            25737..26069
                     /locus_tag="OY092_000534"
     CDS             25737..26069
                     /locus_tag="OY092_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HCX1075507.1"
                     /translation="MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEI
                     ADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRY
                     IQQLEDLE"
     gene            26095..27462
                     /gene="ffh"
                     /locus_tag="OY092_000535"
     CDS             26095..27462
                     /gene="ffh"
                     /locus_tag="OY092_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HCX1075508.1"
                     /translation="MAFEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADV
                     NFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGENSSINMSNKPPT
                     VVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPV
                     YSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEI
                     MLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGM
                     SEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDF
                     LEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPD
                     TLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKG
                     MNLPF"
     gene            27897..28172
                     /gene="rpsP"
                     /locus_tag="OY092_000536"
     CDS             27897..28172
                     /gene="rpsP"
                     /locus_tag="OY092_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HCX1075509.1"
                     /translation="MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTS
                     ANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK"
     gene            28360..28863
                     /gene="rimM"
                     /locus_tag="OY092_000537"
     CDS             28360..28863
                     /gene="rimM"
                     /locus_tag="OY092_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HCX1075510.1"
                     /translation="MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNN
                     DLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEFYYSDI
                     IGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIIT
                     PMEGLLD"
     gene            28863..29600
                     /gene="trmD"
                     /locus_tag="OY092_000538"
     CDS             28863..29600
                     /gene="trmD"
                     /locus_tag="OY092_000538"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HCX1075511.1"
                     /translation="MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAIN
                     KHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSK
                     ADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGN
                     EQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKR
                     PDLIEKYPLTNADKQILERYKIGLKKG"
     gene            29703..30053
                     /gene="rplS"
                     /locus_tag="OY092_000539"
     CDS             29703..30053
                     /gene="rplS"
                     /locus_tag="OY092_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HCX1075512.1"
                     /translation="MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQV
                     FEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYL
                     RSLRGKAARIQEIR"
     gene            complement(30294..32900)
                     /gene="yfhO"
                     /locus_tag="OY092_000540"
     CDS             complement(30294..32900)
                     /gene="yfhO"
                     /locus_tag="OY092_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosyltransferase
                     YfhO"
                     /protein_id="HCX1075513.1"
                     /translation="MLKKWLNSNVKQFFVITFISVILTLILFSTHIYDYIVNGTVFSG
                     AGDGFRQMMPFQMYLYEHLSSFSSLYDASFGLGGDYMKGLSYYYSLSPLMWLNFLFIK
                     IGETVGIFNPTTIHFWPTNQLIMAMIRAIITFVVTFYLFKILHFKRSTNMIATILYGM
                     STVVIYFNFTWSFYGNLLYLLPLSILGLERYFQQRKIGIFIVAIALTLFSNFYFSYYQ
                     AIIIGCYYLYRLIFTYKYDIVSRTQKLICVISAAVLSVLSSVFGLFTGISAFLENDRK
                     QNPNVDIPFLTPLDYHYFFFSDGFYITISILTIVALLSFKLYRFYFYRLFAIVTWILF
                     IGSLSQYFDSAFNGFSFPERRWVYILALSSSALCGLFIQHLSTLNMKYYLIRTIPVSI
                     IALLYVLLSPTHPLVLIVGIILLMVLAVILKFSLWRYKKLTVVLIVLIVMIQQIVILD
                     NNKNMAIKPYQQSISTLKQHDYHSNYVNQLIKKINQNATGPFNRIDYMSDYALNSPFI
                     YHYNGISLYSSIFNGDILKYYDKTLQINMPIDKNSTYRLLGNRQNLLSLWNVNDRIRV
                     NHDYNLPYGFKINSEHKDNKVRWIHSKNTIHYPSAHITNKVFSNKELKSPLDKEQAML
                     QGIVSNNTKDVNTHFKANKNLLSDSTIKLNSAAWQSPSKHLLQVKQNNGGLTVQLPKS
                     VSNQFKDLYFEMDLELLSPDKAHYVKVNEYTLERNKLTYKYRRFVTPVTIRIKSSDAI
                     KLSLPKGKYRVNLKGIYGEDYTTLKDTSNSLEAVKVSKTKQGYTITKNKNSSGYIVLP
                     TAYNQGMKATSGDQSLKVEQVNGVMTGIKAPKNITKIQLSYTPPYYYLLITITIFGII
                     CSIIFTRWVRQK"
     gene            33301..34185
                     /gene="ylqF"
                     /locus_tag="OY092_000541"
     CDS             33301..34185
                     /gene="ylqF"
                     /locus_tag="OY092_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HCX1075514.1"
                     /translation="MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMI
                     DEVINQKPRVVILNKKDMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIK
                     ATAEKFEREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQW
                     IKVGNALQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDL
                     ARLKAHYKIEVPEDAEIIAWFDAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNY
                     CFDIFKDMTEELANDANN"
     gene            34169..34936
                     /locus_tag="OY092_000542"
     CDS             34169..34936
                     /locus_tag="OY092_000542"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HCX1075515.1"
                     /translation="MTLTIKEVTQLINAVNTIEELENHECFLDERKGVQNAIARRRKA
                     LEQEQALKEKYAEMTYFENEILKEHPNAIICGIDEVGRGPLAGPVVACATILNSNHNY
                     LGLDDSKKVPVTKRLELNEALKNEVTAFAYGIATAEEIDEFNIYKATQIAMQRAIDGL
                     SVQPTHLLIDAMTLDNALTQVSLIKGDARSVSIAAASIMAKVFRDDYMTQLSKDYPEY
                     GFEKNAGYGTKQHLLAIDDIGIMKEHRKSFEPIKSLL"
     gene            35045..36211
                     /gene="sucC"
                     /locus_tag="OY092_000543"
     CDS             35045..36211
                     /gene="sucC"
                     /locus_tag="OY092_000543"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HCX1075516.1"
                     /translation="MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYV
                     VKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGC
                     AIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQA
                     RRIAFNINIPKKSVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINF
                     DDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTI
                     NHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVE
                     AVKEVDLTLPLVVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVKEA"
     gene            36233..37141
                     /gene="sucD"
                     /locus_tag="OY092_000544"
     CDS             36233..37141
                     /gene="sucD"
                     /locus_tag="OY092_000544"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HCX1075517.1"
                     /translation="MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKG
                     GQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPV
                     LDMVKVKRYLQGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYE
                     AVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA
                     AEWIKANMTKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT
                     PSEIGSTLIEAAKEAGIYESLLTVNK"
BASE COUNT        13860 a         5041 c         7202 g        11195 t
ORIGIN      
        1 aggagaaagt ttatgaaaaa gacactggga tgtttacttt taattatgct tttagtcgta
       61 gcaggttgtt cttttggtgg taatcataaa ttatcatcaa agaaatcaga agaatcaaaa
      121 caagaaactg taaaaaaaga atcggaagaa gagaaagacc cagatttaga gaaatttgaa
      181 gaaatagaga agaaaatgaa aggaattaaa gatgcgccat ctctagataa gttggatcca
      241 ttaatgacag aaaagtcgtt tacgaatagt aaagggattc aaggatggaa agattacaaa
      301 gaattaatgg gtaaagtgga acttgcagat tatagattta caaaagattc aaaaggatct
      361 tcaataaaag atgttgatgc attctttaaa ggtaagaaag gtataaaaag gaaagtgatt
      421 gaaacacacg atgatgtaaa acaagttgat tattggtatg tagatccaga tggaaagaaa
      481 attggcaatt caaacacacc tgttttttac gcagaaatta tgacaaaata taaagatgga
      541 aagttagttt atgcatcagt cgaaccaggt tcttacgtaa tacataaaga tgatgcaatt
      601 aaatatgacg attattctaa gttaaaaaaa ttaagtcaac taactaaact tgatcatcca
      661 aaaccagttc catatagcgt agctcaaatc aaatctttcg gagtaccttt aacaagcgtt
      721 tcatttatga cacatggatc aaaggatact aaagatgaag tgttgccggc attggcctat
      781 ttcacttttt caccaaaaaa ttatgaagac aagtctaatc cagatccaaa agttttaaat
      841 ttagtacata tggatttctt aaatgcatct agtgattttg gtaacgcaca ttttgttgtt
      901 ttaagtaaat atattaaaga gtatgaatca aactatgaaa cagcgtcaga tgattcttta
      961 aaatagtatt tactgtgtga aaaataaata gtgtactaca ttaaataatc gcaataataa
     1021 tcccgataaa caatcagcat tactgcttat catatagagt tcgtaatatc tataactcta
     1081 tgattcgcaa ttaataaatg attgtcatcg ggatttattt ttatcaattt ataatgtaac
     1141 attaccatgt tcgtcagctg gtttgaaaac agtaattatc gcactaataa ttgctaatat
     1201 atgtgggatg actgtccaaa agaatattaa gtgtaggaaa ccttgcatgt ttttgccggc
     1261 ataaaattta tgaataccaa aactacctaa gaacaatgct aataaaatat aaataacttt
     1321 gtttacttgc atttctttcc ctccagttga attgcttata atgacattaa cttctctttt
     1381 tattataccc acttttagtt caaacattct agtttaagca tttccaatca tctagatttc
     1441 agttattcaa tccttacaat aaatttagga ttacacttca gttgcattgt attattttac
     1501 gtgtgaaata tacgtaatga atcacatgac aatctttaaa ttgaaaaata tacattctat
     1561 gatgtaaggt cgcattttta atatatttac gttataatgg tttgatgaat tttattgagg
     1621 agtaagagct atggcgatta aaaagttagt accagcatcg catcctattt taacgaaaaa
     1681 agcgcaagca gttataaaat ttgatgattc gttaaaaaga ttattacaag atttagaaga
     1741 tacaatgtat gcacaagaag cagctggctt atgtgcacct caaattaatc agtcattgca
     1801 agtggcaatc attgatatgg aaatggaagg attattacaa cttgttaatc cgaaaattat
     1861 tagtcaatca aatgaaacga taacagactt agaaggttca attacattgc cagatgttta
     1921 cggcgaagtg acaagaagta aaatgatcgt tgtcgaaagt tatgacgtca atgggaacaa
     1981 agttgaacta actgcacatg aagatgtagc aagaatgatt ttgcatatta tagatcaaat
     2041 gaacggtatc ccttttacag aacgtgcgga ccgtatttta acagataaag aagtggaggc
     2101 atattttata aatgactaaa ataatattta tgggtacacc agacttttca acaactgttt
     2161 tagaaatgct tattgcagaa catgatgtca ttgcagtcgt aacgcaacca gatcgacctg
     2221 ttggacgtaa acgtgttatg acaccaccac cagttaaaaa agttgcaatg aaatatgatt
     2281 tacctgtata tcagcctgaa aaactaagtg gatcagaaga attagaacaa ttgcttcaat
     2341 tagatgtaga tttaattgta actgctgctt ttggacaatt attacctgaa tcattgttgg
     2401 cattaccaaa acttggcgca attaatgtac atgcatcatt gttaccgaag tatagaggtg
     2461 gtgcaccaat tcatcaggca attatcgatg gtgaacaaga aaccggcata acaattatgt
     2521 atatggttaa aaaattagat gcgggtaata ttatttcgca acaagcaatt aaaatagaag
     2581 aaaatgataa tgtcggtacg atgcatgata aattaagtgt attaggggca gatttattaa
     2641 aagaaacttt accatctatt atagagggca caaatgaaag tgtacctcaa gatgatgcgc
     2701 aagcaacatt tgcttccaat attcgacgcg aagatgagcg aattagctgg aataaaccag
     2761 gaagacaagt gtttaatcaa attcgaggat tatcaccatg gccagttgct tatacaacta
     2821 tggatgacac taacttgaaa atatacgatg ctgaactcgt tgagactaat aagataaacg
     2881 agcctggaac aattatagaa acgactaaaa aagccattat tgttgctaca aatgataatg
     2941 aagctgttgc aattaaagat atgcaattgg ctgcgaaaaa gagaatgtta gctgccaatt
     3001 atttaagtgg tgcgcaaaac acactagtag ggaagaaact tatatgatag aaaacgtgag
     3061 aagtcttgct tttgacacga ttcaagatat attaaatgaa ggtgcgtata gtaacttgcg
     3121 tatcaatgaa gtgttgtcag aaaatgaatt aaatgcaatg gataaagctt tatttacaga
     3181 aattgtctac ggaaccgtta aaagaaaata tacgttagat ttttatttaa agccttttgt
     3241 gaaaacaaag attaaggcat gggttaggca attattatgg atgagtattt atcaatatgt
     3301 ttatttagat aaagttccaa atcatgccat tattaatgaa gcagttgaaa tagcaaaaga
     3361 acgcggtggc tatcataatg gtaatgtcgt aaatggtatt ttacgtacaa tgatgcgtag
     3421 tgacttacct gattttaatg aaattgcaga tcctaaaaaa agaatggcaa tcgagtatag
     3481 tatgccgaag tggattatag atcattgggc aacacattat ggtctcgaag aaactgaaac
     3541 aatcttacag tcatttttag aaacgacatc tacaactgtg cgtgccaacc tgacgcgagc
     3601 atcattagat gatattattg aaaagttgca agacgaaggt tatgacgttg aaaaagatca
     3661 tgacttacct tattgtctcc atataggagg acaaccaatt attcattctc gttcatttaa
     3721 ggatggattc gtttcaattc aagataaaag ctcaatgttt gttgcgcaca ttatgaatgt
     3781 agaccgacat gatcacgtat tagatgcatg tagtgcacct ggcggtaagg cttgtcacat
     3841 tgctgaagtt ttaatgccag aagggcaagt tgacgcttca gatatacatg atcacaaaat
     3901 agacttaatt aattttaata taaaaaaatt acgattaaca aatattaaag cctttcaaca
     3961 tgatgcgaca aaaccttatg ataaaacata cgataagata cttgttgatg caccatgtag
     4021 cggattaggt gtaatgagac ataagccgga gattaagtat actcaaagca aacaacatat
     4081 tgagtcacta gttgatttac agcttgaaat attggaaaat gtaaaaaaca atgtaaaaat
     4141 aggtggcgaa atcatctatt caacatgtac aatagagcaa ctagaaaatg aaaacgtgat
     4201 ttatacgttt ttgaaaaata ataaaaactt cgaatttgaa ccgtttcaac atccgataac
     4261 tggagagttg gtcaaaacgt tacaaatcat gccgcaagac tttaattcag atggattctt
     4321 tatcactaag ataaaaagaa aggacaatta ggaatgataa ctgctgaaaa gaaaaagaag
     4381 aataaatttc ttccaaattt tgacaagcaa tcaatatatt cattgcgatt tgacgaaatg
     4441 caaaactggc tcgttgaaca agggcaacaa aaatttcgag cgaaacagat ttttgaatgg
     4501 ttatatcaaa aaagagtaga ttcgattgat gaaatgacga acttatcgaa agacttacga
     4561 cagctcttaa aagataactt tactgttaca actttaacaa ctgtagtaaa acaagaaagt
     4621 aaagacggta caattaaatt cttatttgaa ttacaagatg gctatacaat tgaaactgtt
     4681 ttaatgagac atgattatgg aaattcagta tgtgtaacaa cacaagtagg ttgtcgtatc
     4741 ggatgtacgt tttgtgcttc tacacttggc ggcttaaaaa gaaaccttga agctggcgaa
     4801 attgtttcac aagttttaac agttcaaaaa gcccttgatg ctacagaaga gcgcgtatct
     4861 caaattgtca taatgggtat cggtgaacca tttgaaaatt atgatgaaat gatggacttt
     4921 ttaagaatcg tcaatgatga taacagttta aatattggtg cacgtcacat tacagtatca
     4981 acatcaggta tcattcctag aatatatgaa tttgcggatg aagatattca aattaatttt
     5041 gctgtaagct tacacgccgc aaaagatgaa gtgcgatcac gcttgatgcc aattaaccgt
     5101 gcatataatg ttgagaagtt aatcgaagca attcaatatt atcaagaaaa aacaaatcgt
     5161 cgtgttactt ttgaatatgg tctgtttggt ggtgtaaatg accaactaga acatgcaaga
     5221 gaattagcac atttaataaa aggcttaaat tgccatgtta acttaattcc tgtcaaccat
     5281 gttccagaaa gaaattatgt aaaaacggct aaaaatgata tctttaaatt tgaaaaagaa
     5341 ttaaagagac taggaattaa tgccacaata cgtcgtgaac aaggttcgga tattgacgca
     5401 gcttgtggtc aattaagagc aaaggaacga caagtagaaa cgaggtaaag acaaatgcta
     5461 gaggcacaat tttttactga tactggacaa catagagata agaatgaaga tgcgggtggt
     5521 attttttata atcaaactaa tcaacaactt ttagttctgt gtgatggtat gggcggccat
     5581 aaagcaggag aagttgcaag taaatttgtt acagatgagt tgaaatcccg ttttgaagcg
     5641 gaaaatctta tagaacaaca tcaagctgaa aattggttgc gtaataatat aaaagatata
     5701 aattttcagt tatatcacta tgcacaagaa aatgcagaat ataaaggtat gggtacaaca
     5761 tgtgtttgtg cacttgtttt tgaaaaatca gttgtgatag caaatgtcgg tgattctaga
     5821 gcctatgtta ttaatagtcg acaaattgaa caaattacta gtgatcactc atttgttaat
     5881 catcttgttt taacgggtca aattacgccg gaagaagcat ttacacatcc acaacgtaat
     5941 attattacaa aggtgatggg cacagataaa cgtgtgagtc cagatttgtt tattaagcga
     6001 ttaaattttt atgattattt attattaaat tcagatggat taactgatta tgttaaagac
     6061 aatgaaatta agcgtttgtt agtaaaagaa ggtacaatag aagatcatgg taatcaatta
     6121 atgcaattgg cattagataa ccattcgaaa gataacgtta ctttcatact cgcggctatt
     6181 gaaggtgata aagtatgata ggtaaaataa taaatgaacg atataaaatt gtagataagc
     6241 ttggcggcgg tggcatgagt accgtttatc ttgcagaaga tacgatactt aacattaaag
     6301 ttgcaattaa ggcgattttt ataccaccta gagaaaaaga agaaacatta aaacgttttg
     6361 aacgagaagt acataactca tcacagctat cacatcaaaa tatagtaagt atgatcgatg
     6421 ttgatgaaga agatgactgt tactacttag taatggaata tattgaaggt ccgactttgt
     6481 ctgagtatat tgaaagtcat gggccattaa gtgttgacac ggcgattaat tttacgaatc
     6541 aaatattgga tggcattaaa catgcgcatg atatgcgtat tgtacataga gatattaagc
     6601 cacaaaatat attaattgac agcaataaaa cgttgaaaat atttgatttt ggaattgcta
     6661 aagctttaag tgagacgtct ttaactcaga ctaatcatgt gttaggtact gtgcagtact
     6721 tttcgccaga acaagcaaaa ggtgaggcaa cggatgaatg tacagatatt tattctatag
     6781 gtattgtgtt atatgaaatg cttgttggtg agccgccatt taatggagaa actgcagtta
     6841 gcattgcgat taaacatatt caggattctg ttccaaatgt gacaacagat gtacgtaagg
     6901 atattccgca atctttaagt aatgtcattt tacgcgctac agaaaaagac aaagcgaatc
     6961 gttacaaaac aattcaagaa atgaaagatg atttgagtag tgttttacat gaaaatcgag
     7021 cgaatgaaga tgtctatgaa ctcgataaaa tgaaaacgat agcggtacct ttgaaaaaag
     7081 aagatctagc aaagcatatt agtgaacata agtcgaatca acctaaacgt gaaacgacgc
     7141 aagtacctat tgtaaatggg cctgctcatc atcagcaatt ccaaaagcca gaaggtacgg
     7201 tgtacgaacc aaaacctaaa aagaaatcaa cacgaaagat tgtgctctta tcattaatct
     7261 tttcgttgtt aatgattgca cttgtttctt ttgtggcaat ggcaatgttt ggtaataaat
     7321 acgaagagac acctgatgta atcgggaaat ctgtaaaaga agcagagcaa atattcaata
     7381 aaaacaacct gaaattgggt aaaatttcta gaagttatag tgataaatat cctgaaaatg
     7441 aaattattaa gacaactccc aatacaggtg aacgtgttga acgtggtgac agtgttgatg
     7501 ttgttatatc aaaaggccct gaaaaggtta aaatgccaaa tgtcattggt ttacctaagg
     7561 aggaagcctt gcagaaatta aaatcgttag gtcttaaaga tgttacgatt gaaaaagtat
     7621 ataataatca agcgccaaaa gaatacattg caaatcaaag tgtaaccgca aatactgaaa
     7681 tcgctattca tgattctaat attaaactat atgaatcttt aggcattaag caagtttatg
     7741 tagaagactt tgaacataaa tcctttagca aagctaaaaa agccttagaa gaaaaagggt
     7801 ttaaagttga aagtaaggaa gagtatagtg acgatattga tgagggtgat gtgatttctc
     7861 aatctcctaa aggaaaatca gtagatgagg ggtcaacgat ttcatttgtt gtttctaaag
     7921 gtaaaaaaag cgactcatca gatgtcaaaa cgacaactga atcggtagat gtaccataca
     7981 ctggtaaaaa tgataagtca caaaaagtta aagtttatat taaagataaa gataatgacg
     8041 gttcaactga aaaaggtagt ttcgacatta ctagtgatca acgtatagac attcctttaa
     8101 gaattgaaaa aggaaaaaca gcaagttata ttgttaaagt tgacggtaaa actgtagctg
     8161 aaaaagaagt cagctatgat gaagtttaaa tataattgta ataagtgtac cgaggtttct
     8221 atttggaagt ctcggtattt tttgttgaga ttgcggtagt tttaaaatgc tttatgacat
     8281 catatacagg tgagcattgt ctatcaattc tgtttcactc ccacaatatt tatatcattt
     8341 gaaatgatca tttatatatt aattttccag tctttgatat aataaatgca gtaaaattaa
     8401 tcgagaggtg ccattttgaa gacaggtcga atagtgaaat caattagtgg ggtatatcaa
     8461 gtagacgtta atggcgaacg tttcaataca aaaccacgag gattatttag aaagaaaaaa
     8521 ttttcaccag tagttggaga tatagtggaa tttgatgtac aaaacattaa tgaaggctat
     8581 attcatcaag tgtatgagcg aaaaaatgag ttgaaaagac cacctgtaag taatatagat
     8641 acactagtaa ttgtaatgag tgctgtcgag ccaaattttt caacgcaatt attagatcga
     8701 tttttagtta ttgcacattc gtatcagtta gatgcgagag ttttggtgac taaaaaagat
     8761 aaaacaccaa ttgaaaagca gcttgaaatt aatgagttgt tgaaaatata tgaaaatatt
     8821 ggctatgaga ctgaatttat tggaaatgat gatgatcgaa aaaaaattgt agaagcttgg
     8881 ccagcaggac ttatagtact tagtggtcaa tcaggtgtcg gtaagtccac tttcttaaat
     8941 cattatcgtc cagaacttaa tcttgagaca aatgatatat caaaatcatt aaatcgagga
     9001 aagcatacta caagacatgt cgaactattc gaacgtcaaa acggttatat tgcagacaca
     9061 cctggattca gtgctttaga ttttgatcat atagataaag atgaaataaa agattatttt
     9121 cttgaattaa atcgatatgg tgaaacatgt aagtttagaa attgtaatca tatcaaagaa
     9181 cctaattgta atgttaagca tcaattagag atagggaata ttgcgcaatt tagatacgac
     9241 cattatttac aactatttaa tgaaatttca aatagaaagg ttagatatta aatgacaaaa
     9301 ctatatccat cattattatc tgttgatttt ttggatttac aacatgaatt aaaacgactt
     9361 gaagaagcag gtgtcgacgg agttcatttt gatgttatgg atggtcaatt tgtgcctaat
     9421 atatctattg gtttaccaat attagatgca gtgagaaaag gcacaacatt acctatagac
     9481 gtacatttga tgattgaaaa tccagaaaag tatattgcat catttgcaga acatggtgcc
     9541 gatatgattt caattcatgt cgaatcaacg cctcatatcc atcgtgctat tcaaatgatt
     9601 aaacatttag ataaaaaagc tggtgtagta attaatcctg gtacaccaat atcacaaatt
     9661 gaacctattt tagacattgt tgattatgta ctagtgatga cagttaaccc agggtttggt
     9721 ggtcaatcat ttattgatca atgcgtagaa aaaatagcgg gtcttaatgc tattaaaatg
     9781 gaacgtcaat taaactttga tattgaagtt gatggaggcg taaataccga tacagcgaaa
     9841 gtttgtgttg aaaatggtgc tacaatgtta gtaacaggtt catttttctt taaacaagag
     9901 gattataaaa aagtcacaca agcattgaaa ggttgagtgt atatgcatat aaatttatta
     9961 tgttctgatc gacacttgcc gcaagatatt tgggccaaaa gtaatgaagg taaatggggc
    10021 ggcgttgata gaggtgcttt gattttattg aagcatcaaa ttatcccttt tttctcagtg
    10081 ggagactttg attcagtcag taaagaagaa cgccaacttc taacagaaca gttacaaatc
    10141 aaaccagttc aagctgaaaa agctgatacg gatttagctt tagcggttga taaagctgtt
    10201 gcacttgggt ttgatagtat tacaatttat ggtgcaacag gcggacgatt agatcacttt
    10261 tttggggcaa ttcagttatt attgaaaaaa gcatattata aacatgatgt tcatatagaa
    10321 gttatcgatc aacaaaataa aattgaatta ttacctaaag gtcaacatac agttgaaaaa
    10381 gataagagtt atccgtacat ttcatttata ccgatgactg atgatgtaga actttctcta
    10441 gcaggtttta aatataattt agctagacaa atgcttaata taggttctac tttaactatt
    10501 tcaaatgaaa ttgagtcttt gcaagcgaaa gtaactgtac atgatgggtt gattttgcaa
    10561 attagaagta cagatttaaa ttaagtatat tcaaatttgt gaggattttt aataaagtga
    10621 cgtttataga tagaatttat aacataataa tagatgaatc acgctgtaat taatgaagat
    10681 tatggcgtga tttattatcg aaaggaaaat tgtaggtcct agtacattga tttatgtgcc
    10741 aaaatcgata ttgaacccat aagtccaatt tgacagagaa ccattattaa acgtattaac
    10801 caaattatat tgatagttcg aatttcacta tgaaccatta tgtattgttt ggtaacaaaa
    10861 aaagaactaa gaggttgagc tcttagttct taagtaaatg tgtcctccac ataaggtcac
    10921 attttttatg tgcaatatat ttattaaact ctagttactt taccagattt taaagcacgt
    10981 gcagaaaccc aaactttttt aggtttaccg tcaactagga ttctaacttt ttgaaggtta
    11041 gcgttccatc tacgtttagt agagtttaaa gcgtgtgaac gtctgttacc agtcgaagct
    11101 ttacgacctg ttacgaaaca ttgtttaccc atatgagtac ctcctttaat aaatataaat
    11161 acacataact acttatatac ttaactaaga tagcatagtt tcatttgaaa aacaatgaat
    11221 aattttcaca taaaagtcaa aaatactgag ttttgtgata taattgtaga ctgtgaagtt
    11281 atgtagtatg atattttaga gaaataagtg aatgaaacat ttaaactttt tatttaatga
    11341 tactacatct attaaaagaa aacgcctata gataatcgtc atgagtgtaa attcagttta
    11401 ctcaaaatat aataggtgat ttaagcgtaa gtcattctga taagttgtac tattgatatt
    11461 ttataaaaat aatcaatgaa acttaaagcg tttatgacta cactaagtgg taaaatttta
    11521 aaagtgatta gggaaaacga ataataaact ttgaaattta ggagggacaa agatatgaca
    11581 ttagagattt caaatgatta cggtaaaatt gatatttcaa acgaagtgat tgcttcggtt
    11641 gtaggtggaa aagccgttga atgttatggt attgtaggta tggcatctag acaacaagtt
    11701 agagatggta ttgcggaaat actaggacat gaaaattatg ctaaaggcat caaagtaact
    11761 gaaaataatg gcgtagtgaa tatagatatg tacattattg taagttacgg tgtgaaaata
    11821 tctgaagttg ccaataatgt acaatcaaca gtgaaatata ctttggaaaa atcacttaat
    11881 gtatcagtaa attcaatcaa tatatatgta caaggtgtac gtgtgaataa tacaggcaag
    11941 aaagcttagg aggacaactt gaaatgatta gcaaaattaa tggtaaatta tttgccgata
    12001 tgattataca aggggcacaa aatttatcta acaatgcaga tttggtagat tctttgaatg
    12061 tgtatccagt gccagatggt gatacaggaa caaatatgaa tcttactatg acttcaggtc
    12121 gcgaagaagt agagaataat ttgtcgaaaa atatcggcga attaggtaaa acattctcga
    12181 aaggtttact aatgggtgca agaggtaact ctggtgtcat cttgtcacaa ttattcagag
    12241 gattttgtaa aaatattgaa agtgaatctg aaattaactc aaaattgtta gctgaaagtt
    12301 ttcaagctgg tgttgaaacg gcatataaag ctgttatgaa accagttgaa ggtacaatac
    12361 ttacagttgc aaaagatgct gcgcaagccg cagtagaaaa agcaaataat actgaagatt
    12421 gtatagaatt aatggagtac attattgtaa aagccaatga atcacttgaa aacacaccaa
    12481 acttattagc tgtacttaaa gaagttggtg ttgttgatag tggtggtaaa ggtttgttat
    12541 gcgtttacga aggattctta aaagcgctta aaggtgaaaa agttgaagcc aaagttgcaa
    12601 agatagataa agatgaattt gtacatgatg aacatgattt ccatggtgta attaatactg
    12661 aagatattat ttatggctat tgtaccgaaa tgatggttcg ttttggaaag aataaaaaag
    12721 cctttgatga acaagaattc aggcaagata tgagtcaatt tggtgattct ttattagtca
    12781 ttaatgatga agaaattgtg aaagttcacg tgcataccga acacccaggt aaagtgttta
    12841 attatggtca acaatatggt gaattaatta aacttaaggt tgaaaatatg agagaacagc
    12901 accgtgaagt gattcgaaaa gaacagcaca cggctaaacc gaaaatggaa acggttgaaa
    12961 cagcaattat tactatttct atgggtgaag gtatttcaga gatatttaaa tcaatgggtg
    13021 ccacacatat cattagtggt ggacaaacga tgaatccttc tacagaagat atcgttaaag
    13081 tcattgaaca atcaaaatgt aaacgtgcaa ttattttacc aaataataaa aatatcttaa
    13141 tggcaagtga acaagcagcg agtattgttg atgcagaagc agttgttatt ccaacgaaat
    13201 ctattcctca aggtataagc gcactattcc aatatgatgt ggacgcaaca cttgaagaaa
    13261 ataaagcgca aatggctgat tcagtaaata acgttaaatc tggttcatta acgtacgctg
    13321 ttcgtgatac gaaaattgat ggcgttgaga taaaaaaaga cgcgtttatg ggcttgattg
    13381 aagataagat tgtaagcagc caaagtgatc aattaacaac ggttactgag ttgttaaatg
    13441 agatgttagc agaagatagt gaaatattga ctgtgattat tggtcaagat gcagagcaag
    13501 aagttacaga taacatgata aactggatcg aagagcaata tccagatgta gaagtggaag
    13561 ttcatgaagg tggacaacca atttatcaat atttcttttc agtagaataa aaatttaaaa
    13621 taaaaaacta ccaatgataa atcatcagtt ggtagttttt tattttgcta ttttagtgtt
    13681 attgcgggtt aaaagtatca ttctcgagtt gctaacaatg tcatgttcaa cttagtcatg
    13741 ataaaataaa taacatacaa aatgatacgt aaaatcaaat aaaacatagg tgatttattt
    13801 tggctaaagt aaacttaata gaaagtccat attctctttt acaattaaaa ggtataggtc
    13861 ctaagaaaat agaagcattg caacaactaa atattcatac agtggaagat cttgttcttt
    13921 atttgccaac tagatatgaa gataatacag tgattgattt gaatcaagca gaagatcaat
    13981 ctaacgttac gatagaagga caagtatata cagctccagt tgttgcattt tttggaagaa
    14041 ataaatcaaa attaaccgtt catttaatgg taaataatat tgctgtcaaa tgtatttttt
    14101 tcaatcaacc gtatttaaaa aagaaaatcg aattaaatca aactataact gttaaaggta
    14161 agtggaatag ggttaaacag gaaattactg gtaatagggt tttctttaat tcacaaggga
    14221 cacaaactca agaaaacgca gatgttcaat tagaaccagt ctatcgtatt aaggaaggta
    14281 ttaaacaaaa gcaaatacga gaccaaatta gacaagcgtt aaatgatgtg acaattcatg
    14341 aatggttaac tgatgaacta agagaaaaat ataaattaga gaccttggac tttactttga
    14401 acacgttaca tcatccaaaa agtaaagagg atttattacg tgctcgtaga acctatgcat
    14461 ttactgaact gtttttattc gaattacgta tgcaatggct aaatagatta gaaaagtcat
    14521 ctgacgaagc aattgaaatt gattatgact tagaccaagt taaatcattt attgatcgtt
    14581 taccttttga actaactgaa gcacagaaat ccagtgttaa tgaaattttt agagatttaa
    14641 aagcaccaat acgtatgcat cgattacttc aaggtgatgt aggttcagga aaaacagttg
    14701 ttgctgcaat ttgtatgtat gcattaaaaa cggctggtta tcaatcagca ttgatggtac
    14761 caactgaaat tttagcagag caacatgctg aaagtttaat ggctttattt ggagattcta
    14821 tgaacgttgc attgttaact gggtcagtaa aaggtaagaa acgaaaaata cttttagaac
    14881 aacttgaaaa tggtacgatt gattgtttaa ttggaactca tgcattgatt caagatgatg
    14941 tgattttcca taatgttggt ttagtaatta cagatgaaca acatcgattt ggtgtgaatc
    15001 aacgccagct tttaagagaa aaaggtgcaa tgacaaatgt gttatttatg acagcaaccc
    15061 cgataccaag aacactagca atatcagttt ttggtgagat ggatgtgtct tcaattaaac
    15121 aattaccaaa aggtcgtaaa cctatcatta ctacttgggc aaagcatgag caatacgata
    15181 aagttttgat gcaaatgact tcagagttga aaaaaggtcg tcaagcatat gtcatttgcc
    15241 cgcttataga aagttctgag catctcgaag atgttcaaaa tgttgtcgca ttgtacgagt
    15301 ctttacaaca gtattatggt gtttcccgtg tagggttatt gcatggtaag ttgtctgccg
    15361 atgaaaaaga tgaggtcatg caaaagttta gcaatcatga gatagatgtt ttagtttcta
    15421 ctactgttgt tgaagtaggt gttaatgtac cgaatgcaac ttttatgatg atttatgatg
    15481 cggatcgctt tggattatca actttacatc agttacgcgg tcgtgtaggt agaagtgacc
    15541 agcaaagtta ctgtgtttta attgcatccc ctaaaacaga aacaggaatt gaaagaatga
    15601 caattatgac acaaacaacg gatggatttg aattgagtga acgagactta gaaatgcgtg
    15661 gtcctggaga tttctttggt gttaaacaaa gtggattgcc agatttctta gttgccaatt
    15721 tagttgaaga ttatcgtatg ttagaagttg ctcgtgatga agcagctgaa cttattcaat
    15781 ctggcgtatt ctttgaaaat acttatcaac atttacgtca ttttgttgaa gaaaatttat
    15841 tacatcgtag ttttgactaa ttgccatgct gatttgtcaa tttgagtgca acacttcgtt
    15901 aattgagtga tatgacactt gaactattta aatgtaaagt ggtattttaa caatttataa
    15961 attttcgact aaataatagc taaataatac agttatttgt tgagtcggtt aaatagaaag
    16021 tgttatgata tgtgaggaat gtttaagact aggtactaaa aaatgagggg tgagacgttg
    16081 aaactaaaga aagataaacg tagagaagca atcagacaac aaattgatag caatcccttc
    16141 atcacagacc atgaactaag cgacttattt caagtgagta tacaaacaat tcgtttagat
    16201 cgcacttatt taaacatacc agaattaagg aagcgtatta aattagttgc tgaaaagaat
    16261 tatgaccaaa taagttctat tgaagaacaa gaatttattg gtgatttgat tcaagtcaat
    16321 ccaaatgtta aagcgcaatc aattttagat attacatcgg attctgtttt tcataaaact
    16381 ggaattgcgc gtggtcatgt gctgtttgct caggcaaatt cattatgtgt tgcgctaatt
    16441 aagcaaccaa cagttttaac tcatgagagt agcattcaat ttattgaaaa agtaaaatta
    16501 aatgatacgg taagagcaga agcacgagtt gtaaatcaaa ctgcaaaaca ttattacgtc
    16561 gaagtaaagt catatgttaa acatacatta gttttcaaag gaaattttaa aatgttttat
    16621 gataagcgag gataaaatta tggttaaatt agcaattgat atgatgggtg gcgacaatgc
    16681 gcctgatatc gtattagaag ccgtacaaaa ggctgttgaa gactttaaag atctagaaat
    16741 tatacttttc ggtgacgaaa aaaagtataa tctgaaccat gaacgaatcg aatttagaca
    16801 ttgttctgaa aagattgaaa tggaagatga gcctgttaga gcgattaaac gtaaaaaaga
    16861 tagctcaatg gtaaaaatgg ctgaagctgt gaaatctggt gaagcagatg gatgtgtgtc
    16921 agcaggtaat actggtgctt taatgtcagc tggtttattc attgttggac gtattaaagg
    16981 tgtagctaga ccggctttag tagtaacatt gccaacgatt gatggaaaag gttttgtctt
    17041 tttagacgtt ggtgcaaatg ctgatgctaa acctgaacac ttattacagt atgcgcaact
    17101 aggggatatt tatgctcaaa aaattagagg tattgataat ccgaaaatct cattattaaa
    17161 tataggaacc gagccagcta aaggtaatag tttaacgaaa aaatcatatg agttattaaa
    17221 tcatgatcat tcattgaatt ttgttgggaa tattgaagcg aagacattaa tggatggcga
    17281 tacagatgtt gtagttaccg atggctatac agggaacatg gtccttaaaa atttagaagg
    17341 tactgcaaaa tcaatcggta aaatgttaaa agatacgatt atgagtagta ctaaaaataa
    17401 attagcaggt gcaatattga agaaagattt agctgaattc gctaaaaaga tggactactc
    17461 agaatacggt ggttccgtat tattaggatt ggaaggtact gtagttaaag cacacggtag
    17521 ttcaaatgct aaagcttttt attctgcaat tagacaagcg aaaatcgcag gagaacaaaa
    17581 tattgtacaa acaatgaaag agactgtagg tgaatcaaat gagtaaaaca gcaattattt
    17641 ttccgggaca aggtgcccaa aaagttggta tggcacaaga tttgtttaac aacaatgatc
    17701 aagcaactga aattttaact tcagcagcga acacattaga ctttgatatt ttagagacaa
    17761 tgtttactga tgaagaaggt aaattgggtg aaactgaaaa cacgcaacca gctttattga
    17821 cgcatagttc ggcattatta gcagcgctaa aaaatttgaa tcctgatttt actatggggc
    17881 atagtttagg tgaatattca agtttagttg cagctgacgt attatcattt gaagatgcag
    17941 ttaaaattgt tagaaaacgt ggtcaattaa tggcgcaagc atttcctact ggtgtaggaa
    18001 gcatggctgc agtattggga ttagattttg ataaagtcga tgaaatttgt aagtcattat
    18061 catctgatga caaaataatt gaaccagcaa acattaattg cccaggtcaa attgttgttt
    18121 caggtcacaa agctttaatt gaagagctag tagaaaaagg taaatcatta ggtgcaaaac
    18181 gtgtcatgcc tttagcagta tctggaccat tccattcatc gctaatgaaa gtgattgaag
    18241 aagattttgc aagttacatt aatcaatttg aatggcgtga tgctaagttt cctgtagttc
    18301 aaaatgtaaa tgcgcaaggt gaaaccgaca aagaagtaat taaatctaat atggtcaagc
    18361 aattatattc accagtacaa ttcattaact caacagaatg gctaatagac caaggtgttg
    18421 atcattttat tgaaattggt cctggaaaag ttttatctgg cttaattaaa aaaataaata
    18481 gagatgttaa gttaacatca attcaaactt tagaagatgt gaaaggatgg aatgaaaatg
    18541 actaagagtg ctttagtaac aggtgcatca agaggaattg gacgtagtat tgcgttacaa
    18601 ttagcagaag aaggatataa tgtagcagta aactatgcag gcagcaaaga gaaagctgaa
    18661 gcagtagtcg aagaaatcaa agctaaaggt gttgacagtt ttgcgattca agcaaatgtt
    18721 gccgatgctg atgaagttaa agcaatgatt aaagaagtag ttagccaatt tggttcttta
    18781 gatgttttag taaataatgc aggtattact cgcgataatt tattaatgcg tatgaaagaa
    18841 caagagtggg atgatgttat tgacacaaac ttaaaaggtg tatttaactg tatccaaaaa
    18901 gcaacaccac aaatgttaag acaacgtagt ggtgctatca tcaatttatc aagtgttgtt
    18961 ggagcagtag gtaatccggg acaagcaaac tatgttgcaa caaaagcagg tgttattggt
    19021 ttaactaaat ctgcggctcg tgaattagca tctcgtggta tcactgtaaa tgcagttgca
    19081 cctggtttta ttgtttctga tatgacagat gccttaagtg atgagcttaa agaacaaatg
    19141 ttgactcaaa ttccgttagc acgttttggt caagacacag atattgctaa tacagtagcg
    19201 ttcttagcat cagacaaagc aaaatatatt acaggtcaaa caatccatgt aaatggtgga
    19261 atgtacatgt aatatatttg agctaaagct caagataaag acgtagtaat caataaattg
    19321 ataacaggga tagaggtacg cctgagctaa agctcattga cgcagtggtt gactggtcat
    19381 ccgatggaga attgcctgac ctagtcaact ttgcgggggg aattctaagt aacctagata
    19441 aggttccaga atttctccct aagaaacact aatcaataaa ttgataagaa gattagagga
    19501 acgcttgagc taaagctcat gcataagaaa cagtaatcaa taaattgata actgggatag
    19561 aggtacgcct gagctaaagc tcatgcataa gaaacagtaa tcaataaatt gataactgtt
    19621 tctaaaattt ctacttgttt tttagaattt aaaatgggaa aatataatag tctatgtata
    19681 ggcattttta aaggaggtga atcgacgtgg aaaatttcga taaagtaaaa gatatcatcg
    19741 ttgaccgttt aggtgtagac gctgataaag taactgaaga tgcatctttc aaagatgatt
    19801 taggcgctga ctcacttgat atcgctgaat tagtaatgga attagaagac gagtttggta
    19861 ctgaaattcc tgatgaagaa gctgaaaaaa tcaacactgt tggtgatgct gttaaattta
    19921 ttaacagtct tgaaaaataa taaatcttac atctgggtcg tcagtattgt cgactcagtt
    19981 tttttcttta attatcaata gttttaacgt aaaattaaag atgattcaag agcaacacat
    20041 aaaggagata aaataatgtc taaacaaaag aaaagtgaga tagttaatcg ttttagaaag
    20101 cgctttgata ctaaaatgac agagttaggc tttacttatc aaaatattga tttataccaa
    20161 caagcatttt cgcattcgag ttttattaat gattttaata tgaatcgttt agaccataat
    20221 gagcgtttag agtttttggg tgatgcggta ttagaattga cggtttcacg atatttattt
    20281 gataaacatc ccaacttgcc agaagggaat ttaacaaaaa tgcgtgccac tattgtatgt
    20341 gagccctcac ttgtaatatt tgcgaataaa attggattga acgaaatgat tttacttggt
    20401 aaaggtgaag agaaaacagg gggacgtaca agaccatcat taatatcaga tgcattcgaa
    20461 gcatttattg gggcattgta tttggatcaa ggactagata tagtttggaa atttgctgag
    20521 aaagttattt tcccacatgt agaacaaaat gagttattag gagtggtaga ttttaaaaca
    20581 caattccaag aatatgtgca ccagcaaaat aaaggtgatg taacctataa tttaataaaa
    20641 gaagagggac cggcacatca tcgtctattc acttcagaag ttattctgca aggggaagca
    20701 atagctgaag gtaaagggaa aacgaaaaaa gaatcagaac aacgtgctgc tgaaagtgcc
    20761 tataagcaat taaaacaaat taaatagaag tttatatgat acgacatata ggtgttcgat
    20821 ttaggattta aggaagaatt tttaatattt tatggaacaa cttcgaaatt taatatacaa
    20881 atattaaaat atcgtataca tgtgttcttt aaaattgtga taaggagttt aggatggttt
    20941 atttaaaatc aatagatgcc attggattta agtcttttgc agatcaaacc aatgttcaat
    21001 tcgataaagg tgtaactgca attgttggtc caaatggaag cggtaaaagt aatattacag
    21061 atgctattaa atgggtgttg ggtgaacaat cggctaaatc attacgtggc tcaaaaatgg
    21121 aagatattat cttctcaggt gcagaacatc gcaaagctca aaattatgct gaagtacagt
    21181 taagattaga taatcattct aaaaagctca gtgttgatga aaacgaagtt attgtaacaa
    21241 gaagattgta tcgaagtggt gaaagtgagt actacataaa taatgaccgt gcaagattaa
    21301 aagatattgc cgatttattt ttagattctg gattgggaaa agaagcatat agcattatct
    21361 cgcaaggtag agttgatgaa atactaaatg ctaaaccaat tgatagacgt caaattattg
    21421 aagaatcggc tggtgtactt aaatataaaa aacgtaaagc tgaatcatta aataaacttg
    21481 accaaacaga agataattta acgagagtag aagacatttt atatgatttg gaaggtcgtg
    21541 tagaacctct aaaagaggag gcagctatag ctaaagaata taagacactt tcacaccaaa
    21601 tgaaacatag tgacattgta gttacagtgc acgatattga tcaatataca aatgacaata
    21661 gacaattaga tcaacgttta aatgatttac aaggtcaaca agcaaataaa gaagctgaca
    21721 agcaacgttt aagccaacaa attcaacaat ataaaggtaa acgtcatcaa cttgataatg
    21781 atgttgaatc gcttaattat caattagtaa aagctacgga agcctttgaa aaatatacgg
    21841 gacaattaaa tgttttagaa gaacgtaaga aaaatcaatc tgaaacaaat gcacgatatg
    21901 aagaagaaca agaaaattta atggagcttt tagaaaatat atcaaatgag atttctgaag
    21961 ctcaagatac ttataagtct ctgaaaagta aacaaaaaga actcaatgct gtcattcgtg
    22021 aacttgaaga acaactatat gtttcagacg aagcacatga tgaaaaattg gaagaaatta
    22081 aaaacgaata ctatacatta atgtcagagc aatcagatgt taacaatgat attcgttttt
    22141 taaagcatac tatagaagag aatgaggcta aaaaatcaag actagattct cgattagttg
    22201 aagtttttga gcaattgaaa gatattcagg gtcaaataaa aacgacaaaa aaagaatatc
    22261 aacagaccaa caaagaactt tctgctgtag ataaagaaat taaaaatata gaaaaagatc
    22321 tcactgatac aaaaaaagca caaaatgaat acgaagagaa attgtatcaa gcatatcgat
    22381 ataccgaaaa aatgaaaaca cgtattgata gtttggcaac gcaagaggaa gaatatactt
    22441 attttttcaa tggcgtcaaa catattttga aagctaaaaa taaagaatta aagggtattc
    22501 atggtgcagt tgcggaaatt attgatgtgc catctaaatt aactcaggca attgaaacag
    22561 cattaggtgc ttcattacaa catgtcattg tagattcaga aaaagatgga cgccaggcta
    22621 ttcaattttt aaaagaacgt aatttaggtc gtgcgacgtt tttaccatta aatgttatac
    22681 agagtagagt ggtagcgact gatattaaat ctattgctaa agaggcaaac ggatttatta
    22741 gtatcgcttc ggaagcagtt aaagtagcac cagaatatca aaatattatc gggaatttat
    22801 taggtaatac gattatcgtt gatcatttaa agcatgcaaa tgaattggca cgtgcgatta
    22861 aatatcgaac tcgtattgtt actttggaag gtgatattgt aaatcctggt ggttctatga
    22921 ctggtggtgg cgctcgtaag tcaaaaagta ttctgtctca aaaagacgag ttgacaacaa
    22981 tgagacacca attagaagat tacttgcgtc aaacagaatc atttgaacaa caatttaaag
    23041 agttgaagat aaaaagtgat caattaagtg aactgtattt tgaaaaaagt caaaagcata
    23101 atacacttaa agagcaagtg catcattttg aaatggagct cgatagatta actacacaag
    23161 aaacacaaat aaaaaatgat catgaagaat tcgaatttga aaaaaatgat ggttatacga
    23221 gtgacaaaag tcgacaaact ttgagtgaaa aagaaactca tctagaaagt attaaagcat
    23281 ctttaaaacg actagaagat gaaattgaac gctacacaaa actttctaaa gaaggtaagg
    23341 aaagcgttac taaaacacaa caaaccttac atcagaaaca atctgatctt gctgtggtta
    23401 aagagcgtat taaaacacaa caacagacaa tagatcgatt aaataatcaa aatcaacaaa
    23461 ctaaacatca attaaaagat gttaaagaaa aaattgcatt ctttaattcg gatgaagtga
    23521 tgggcgaaca agcttttcaa aatattaaag atcaaattaa tggtcaacaa gaaacgagaa
    23581 cacgcttatc tgatgaatta gataaattga aacaacaacg tattgagttg aatgaacaaa
    23641 tcgatgcgca agaagctaaa ctacaagttt gtcaccaaga tattttagct atcgaaaatc
    23701 actaccaaga tattaaagct gaacaatcaa agctagatgt attaattcat catgcgatag
    23761 atcatttaaa tgatgaatat caattgactg ttgaacgtgc gaaatctgaa tatacgagtg
    23821 atgaatcgat tgacgcatta cgtaaaaaag ttaagttaat gaagatgtcg attgatgaac
    23881 taggtcctgt aaacttaaat gcaattgaac aatttgaaga gttaaatgaa cgttatacat
    23941 ttttaagtga acaacgtaca gatcttcgta aagctaaaga aacattagag caaattataa
    24001 gtgaaatgga tcaagaggtt actgaaagat ttaaagaaac tttccatgct attcaaggac
    24061 attttacagc tgtgttcaaa caattgtttg gtggaggcga tgcagaattg caattaactg
    24121 aagccgatta tttaacagct ggtattgata ttgtggtaca accaccgggt aaaaagttgc
    24181 aacatttatc gttactaagt ggtggtgagc gtgcattaac tgctattgct ttactatttg
    24241 caattttaaa agtaagatct gcaccttttg ttatattaga tgaggttgaa gctgcattag
    24301 atgaagcgaa tgttattaga tacgcaaaat atttaaatga gttatcagac gaaacacaat
    24361 tcattgttat tacacaccgt aaaggaacaa tggaatttgc tgataggtta tacggtgtga
    24421 caatgcaaga atcaggtgtt actaaacttg tgagtgtgaa tttaaataca atagatgatg
    24481 tgttgaagga ggagcaataa tgagcttttt taaacgctta aaagataaat ttgcaacaaa
    24541 taaagaaaat gaagaagtta aatccttaac agaagaacaa ggtcaagaca aattagaaga
    24601 tacacattct gaaggttcaa cgcaggacgt aaatgattta gcagaaaatg ctgaagtgaa
    24661 aaagaagcca cgcaagttaa gtgaagcgga ttttgatgac gatggcttaa tatcaattga
    24721 agattttgaa gaaattgaag ctcaaaaaat gggtgctaaa tttaaggcag gactcgaaaa
    24781 atctcgtcaa aatttccaag aacaattaaa taatttgata gcgagatatc gtaaagtaga
    24841 tgaagacttt tttgaagctt tagaagaaat gttaatcact gcagacgtcg gttttaatac
    24901 tgtgatgacg ttaactgaag aattacgtat ggaagcacaa cgacgtaata ttcaagatac
    24961 tgaagatttg cgtgaagtca ttgttgaaaa aatcgtagag atttaccatc aagaagatga
    25021 taattcagaa gctatgaact tagaagatgg tcgtttaaat gtcattttaa tggttggtgt
    25081 gaatggtgtt ggtaaaacaa caacaattgg aaaattagct taccgatata aaatggaagg
    25141 taaaaaagta atgttagctg cgggcgatac ttttagagcg ggtgctattg atcaattgaa
    25201 agtttggggc gaacgtgttg gtgtagatgt aattagccaa agtgaaggtt ctgatccagc
    25261 tgctgttatg tatgatgcga ttaatgccgc taaaaacaaa ggtgttgata ttttaatctg
    25321 tgataccgct ggacgtttac aaaataaaac aaatctaatg caagaattag aaaaagttaa
    25381 gcgtgtaatt aatcgagcag tgccagatgc gcctcatgaa gcattactat gtttagatgc
    25441 tacaactggt cagaatgcgt tgtcacaagc tagaaacttt aaagaagtaa caaatgttac
    25501 aggtattgta ttaacgaaat tagatggtac agccaaaggt ggtatcgtat tagccattcg
    25561 taatgaattg cacattccag ttaaatatgt aggtttaggt gagcaattag atgacttaca
    25621 accatttaac cctgaaagtt atgtctacgg cttattcgct gatatgattg aacaaaatga
    25681 agaaataaca acagttgaaa atgatcaaat tgtaacagaa gaaaaggacg ataatcatgg
    25741 ggcaaaatga tttagttaaa acgttacgaa tgaattattt gtttgatttt tatcaatcct
    25801 tattgacgaa taaacaacgt aattatttgg aattatttta tctcgaagat tattctttga
    25861 gtgaaatcgc agatactttt aatgtgagta gacaagcagt ttatgataat ataagaagaa
    25921 ctggcgattt agttgaagat tatgaaaaga aattggaatt ataccagaaa tttgagcaac
    25981 gccgagaaat atatgatgaa atgaaacaac atttaagtaa tccagaacaa atacaacgtt
    26041 atattcaaca attagaagac ttagaataga tataaattga gggaggacat cgatatggca
    26101 tttgaaggct tatcagaacg cctgcaagcg acgatgcaaa aaatgcgtgg taagggtaaa
    26161 cttactgaag ctgatataaa gataatgatg cgtgaagtaa gattagcgtt acttgaggct
    26221 gacgtaaact ttaaagtggt aaaagaattt attaaaacag tatcagaacg cgcattaggt
    26281 tccgatgtaa tgcaatcatt aacacctggg caacaagtta ttaaaatagt tcaagatgaa
    26341 ttaacgaagt tgatgggtgg agaaaattca tcgattaata tgtcaaataa accacctact
    26401 gttgttatga tggttggttt acaaggtgct ggtaaaacaa caactgcagg taaattagca
    26461 ttattgatgc gtaaaaaata caacaaaaaa cctatgttag ttgcagcaga tatttatcgt
    26521 ccagcagcga taaatcaatt acaaacagta gggaaacaaa ttgatattcc tgtatacagt
    26581 gaaggggatc aagtaaagcc acaacaaatt gtaactaatg cattaaaaca tgctaaagaa
    26641 gaacatttag actttgtaat cattgataca gcaggtcgat tacacatcga tgaagcattg
    26701 atgaacgaat taaaagaagt aaaagacatt gctaaaccaa acgaaattat gttagttgtc
    26761 gattcaatga cgggtcaaga tgctgtcaat gttgcagaat cttttgacga tcaacttgat
    26821 gtcacaggtg ttaccttaac taaattagat ggtgatacac gtggtggtgc agctttatct
    26881 attcgttcgg tgacacaaaa accaattaaa tttgttggta tgagtgaaaa gttagatggt
    26941 ttagagctat tccatcctga acgtatggca tcacgtattt taggtatggg tgatgtgtta
    27001 agtttaattg aaaaagcgca acaagatgtg gatcaagaaa aagcaaaaga tttagagaaa
    27061 aagatgcgtg aatcatcatt tactttagat gattttttag aacagcttga tcaggtgaaa
    27121 aatttaggac cactggatga tattatgaaa atgattccag gtatgaataa aatgaaaggt
    27181 ctagataagc ttaatatgag tgaaaagcaa attgatcata ttaaagcgat tatccagtca
    27241 atgacgccgg ctgaaagaaa caatccagac acattgaatg tatcacgtaa aaagcgtatt
    27301 gctaaaggtt ctggtcgttc attacaagaa gtcaatcgtt tgatgaaaca atttaacgat
    27361 atgaagaaaa tgatgaaaca attcactggt ggcggtaaag gtaaaaaagg taaacgcaat
    27421 caaatgcaaa atatgttaaa aggtatgaac ttaccatttt aatgtttaat ttaacacgct
    27481 gatttttgtt gcaatgagat gtgcatcccg aaagttatac taaagaatat aactttatgg
    27541 ggtgcatatt tttagataca caataataat taaaaactga aattgctgat ttgctagaac
    27601 atgaggttat tgttgctaat attaataagt tatattggtg gaacatgtgc gttagaagtg
    27661 gtaccattca tgtccttacg agataaatta acttaacacg tatgtggtga aggttaatat
    27721 gaatttttat aaactattaa cagtctaatt tagtaatcac atagttattt ttgtaagaaa
    27781 aaggttcaat aattttcctg gtaaagaaaa aactctttac aaacattcac acacctgtta
    27841 atattatttc ttgtagaaaa taaaaattaa aacatgactt aaaggagatt ttataaatgg
    27901 cagttaaaat tcgtttaaca cgtttaggtt caaaaagaaa tccattctat cgtatcgtag
    27961 tagcagatgc tcgttctcca cgtgacggac gtatcatcga acaaatcggt acttataacc
    28021 caacgagcgc taatgctcca gaaattaaag ttgacgaagc gttagcttta aaatggttaa
    28081 atgatggtgc gaaaccaact gatacagttc acaatatctt atcaaaagaa ggtattatga
    28141 aaaaatttga cgaacaaaag aaagctaagt aatttagcgt aaaattgttc taacaataag
    28201 aataactcgt ttacactgac agttattact caatgatacg ttgggaatat cacatgttag
    28261 taatatagaa cgtattgggt accataatgg tgcccttttt ctttgaataa ttttcaatta
    28321 aaatagaagt gttcaaagca tagagttgga ggtaatagaa tgagagttga agttggtcaa
    28381 attgttaaca cacatggtat taaaggtgaa attaaagtaa aatccaattc agactttaca
    28441 gacgttcgtt ttcaacccgg tcaagtgctg acagttgtgc ataacaataa cgaccttgaa
    28501 tatactgtta agtcacatag agtgcataaa gggcttcata tgcttacatt tgaaggtatt
    28561 aataatatta atgatattga gcatttaaaa gggagttcta tttatcaaga gcgtgatcat
    28621 gaagatatcg tacttgagga aaatgaattt tattattcag atattatagg atgtacagtt
    28681 tttgatgatc aagaaacacc aataggtcgt gtaattaata tctttgaaac aggtgcaaat
    28741 gatgtgtggg tgattaaagg atctaaagaa tatttgattc cttatattgc tgatgttgta
    28801 aaagaagtgg atgttgaaaa taaaaaaatt atcatcacgc caatggaagg attgttggat
    28861 taatgaaaat tgattattta actttatttc ctgaaatgtt tgatggtgtt ttaaatcatt
    28921 caattatgaa acgtgcccaa gaaaacaata aattacaaat caatacggtt aattttagag
    28981 attatgcaat taacaagcac aaccaggtag atgattatcc gtatggtggc ggacaaggta
    29041 tggtgttaaa gcctgaacct gtttttaatg cgatggaaga cttagatgtc acagaacaaa
    29101 cacgcgttat tttaatgtgt ccacaaggcg agccattttc acatcagaaa gctgttgaat
    29161 taagcaaggc tgaccacatc gttttcatat gcggacatta tgaaggttac gatgaacgta
    29221 tccgaacaca tcttgtcaca gatgaaatat caatgggtga ctatgtttta acaggtggag
    29281 aattgccagc gatgaccatg actgatgcta ttgttagact gattccaggt gttttaggta
    29341 atgaacagtc acatcaagac gattcatttt cagatgggtt attagagttt ccgcaatata
    29401 cacgtccgcg tgaatttaaa ggtctaacag ttccggatgt tttattgtct ggaaatcatg
    29461 ccaatattga tgcatggaga catgagcaaa agttgatccg cacatataat aaaagacctg
    29521 acttaattga aaaatatcca ttaactaatg cagataagca aatattagaa agatataaaa
    29581 taggattgaa aaaaggttag tattgtgcta acataatctg agtgtggaaa cacaaaaatc
    29641 actatgatcc gctgctatat atttgtcgag gcaagaacat aggttgaaga ggagaattta
    29701 taatgacaaa tcacaaatta atcgaagcag taactaaatc acaattacgt acagacttac
    29761 caagtttccg tcctggtgat actttacgtg tacacgtacg tatcattgag ggtactcgtg
    29821 agcgtatcca agtattcgaa ggcgttgtaa ttaaacgtcg tggcggtggc gtttctgaaa
    29881 cgtttacagt tcgtaaaatt tcatcaggtg ttggcgtgga acgtacattc ccattacaca
    29941 caccaaaaat tgaaaaaatc gaagttaaac gtcgtggtaa agtacgtcgt gctaaattat
    30001 attacttacg tagtttacgt ggtaaagctg ctagaatcca agaaattcgt taatcagcat
    30061 ttaaacaaag ctatgtatga gtcatattcg actcaaacaa caaagccatc taggtcactt
    30121 ttatggagtg atatagatgg ctttttttgc tgtttagtta atgtaaagtt gataatgtaa
    30181 ttgttttttt atttattcat aacgtgtttg ctcaaaatgg ttatataaac aaaaatctac
    30241 taagtgccat tgaaaaggac ttagtagatt tattaaatat atgcgtagcc acattatttt
    30301 tgtcttaccc atctcgtgaa aataatacta catataatgc caaatatagt aattgttata
    30361 agtaaataat agtatggtgg ggtatagctc aattgaatct ttgttatatt tttaggtgct
    30421 ttaatgccgg tcataacacc atttacttgt tcaactttaa gactttgatc acctgatgtc
    30481 gctttcatac cttgattata tgctgttggc aaaacaatat acccagatga atttttattt
    30541 ttagtaatag tataaccttg ctttgtctta ctaactttga cagcctctaa tgaatttgaa
    30601 gtgtctttaa gcgtggtata atcttcgccg tatatccctt ttaaatttac acgatactta
    30661 cctttaggca acgataattt aattgcatct gaagatttaa tacgtatcgt tacaggtgtt
    30721 acaaaacgac ggtatttata tgtgagtttg tttctttcta gtgtatattc attaacttta
    30781 acataatgag ctttatccgg cgaaagtaat tctaaatcca tttcaaaata caaatcttta
    30841 aattgattag aaactgattt tggcaactgt acagttagac caccattatt ttgtttaact
    30901 tgtaataaat gttttgaagg agattgccag gctgcactat ttaatttaat tgttgaatct
    30961 gatagtaaat ttttattggc tttaaaatgt gtatttacat ctttagtatt gttagaaaca
    31021 atcccttgca acattgcttg ttctttatct aatggagatt ttaattcttt attggaaaag
    31081 accttatttg taatatgtgc acttggataa tggatggtat ttttagaatg aatccaacga
    31141 actttattgt ctttgtgttc agagttaatt ttaaatccat atggtaagtt gtaatcatga
    31201 tttactctaa ttcgatcatt tacattccaa agcgatagta aattttgacg attgccaagt
    31261 aatctataag tgctgttttt atcgattggc atattaattt ggagtgtctt gtcataatat
    31321 tttaaaatgt ctccattaaa aatactagaa tataatgaaa tgccattata atgatatata
    31381 aatggtgaat ttaatgcata gtctgacata taatcaatgc gattaaatgg gcctgttgca
    31441 ttttgattta tcttttttat aagctggttt acatagttac tatgataatc atgttgtttc
    31501 aacgttgata ttgattgttg ataaggtttg attgccatat ttttgttgtt atctaaaatg
    31561 acgatttgtt gaatcataac gattaatact attaatacaa cggttaattt tttataacgc
    31621 cataaactaa attttaaaat aacggcaagc accattagca ggataatacc tactataagt
    31681 acgagtgggt gtgtcggtga tagtaataca taaagtaatg cgatgatgct tactggtatt
    31741 gttctgatta aataatattt catatttaat gttgataaat gctgaataaa caatccgcaa
    31801 agagcacttg atgatagtgc taagatatac acccaacgcc tttctggaaa tgaaaaacca
    31861 ttaaaagcac tgtcgaaata ctgtgataat gaaccaataa ataatatcca tgttactatt
    31921 gcgaaaagtc tataaaagta aaaacgatac agtttgaatg acaataatgc aacgatagta
    31981 agaattgaaa tcgtaatata aaatccatcg ctaaagaaaa aataatgata atcaagtggt
    32041 gtcaaaaacg gtatatcaac attgggattt tgctttctgt cattttccaa aaacgcagaa
    32101 atgccagtga ataaaccaaa tacacttgat aacacactca aaactgcagc agatatgacg
    32161 caaattaatt tttgtgttct agagacaatg tcatatttgt aagtgaaaat gagtcgatat
    32221 aaatagtagc aacctataat aatagcttga taataactga aataaaaatt gctaaatagt
    32281 gttaaggcta tcgcaacaat gaatataccg attttgcgtt gttgaaaata tctttccaaa
    32341 ccaagaatcg ataatggtaa taaatataat aaatttccat aaaatgacca agtaaaatta
    32401 aagtatataa cgacagttga catgccgtat aaaatcgtag cgatcatatt tgttgagcgt
    32461 ttaaagtgta atattttaaa taagtagaag gtcacgacaa atgttatgat agctcgtatc
    32521 atggccataa taagttggtt tgtcggccaa aaatgtattg ttgtcggatt aaatatacca
    32581 accgtttctc ctattttaat gaatagaaaa tttagccaca ttaaaggtga cagcgaataa
    32641 taatatgata gtcctttcat ataatcgcca cctaatccaa acgatgcatc atataaacta
    32701 gaaaaactac ttagatgttc atacaaatac atttgaaatg gcatcatttg acggaatcca
    32761 tctccagccc cactaaaaac agtaccattc acaatataat catagatatg agtagaaaat
    32821 aaaataagcg ttaatattac actaatgaaa gttataacaa agaattgttt gacgtttgaa
    32881 tttagccact tttttaacac aacattatcc tcaactttca aatttaaaat taagtttaac
    32941 tgaaactaaa gttaatgagg ttcttgatag gtaaagacga agatgactgt ggaacagata
    33001 ccttatcata gttacttaaa ctttggatca ttttcagttt atcattaaac aaatatattg
    33061 aataataaaa atgtcatact gataaagatg aatgtcactt aataagtaac ttagatttat
    33121 taaatgaaaa tttttaatta gagaaaactt ggaataatca cttatacctg aatctaaagc
    33181 attgttaaga agtgtgacaa tgttaaaata aatatagttg aattaatgaa tttgttctat
    33241 aattaacagg ttatagattt taataatgag aaaagaattg acgaaagtaa ggtgaattga
    33301 atggttattc aatggtatcc aggacatatg gcgaaagcca aaagagaagt aagtgaacaa
    33361 ttaaaaaaag tagatgtagt gtttgaacta gtagatgcaa gaattccata tagttcaaga
    33421 aaccctatga tagatgaagt tattaaccaa aaaccacgtg ttgttatatt aaataaaaaa
    33481 gatatgtcta atttaaatga gatgtcaaaa tgggaacaat tttttattga taaaggatac
    33541 tatcctgtat cagtggatgc taagcacggt aaaaatttaa agaaagtgga agctgcagca
    33601 attaaggcga ctgctgaaaa atttgaacgc gaaaaagcaa aaggacttaa accaagagcg
    33661 attagagcaa tgattgttgg aattccaaat gttggtaagt ccacattaat aaataaactg
    33721 gcaaagcgta gtattgcaca gactggtaat aaaccaggtg tgaccaaaca acaacaatgg
    33781 attaaagttg gtaatgcatt acaactatta gatacaccag ggattctttg gcctaaattt
    33841 gaagatgaag aagtcggtaa gaagttgagt ttaacaggcg cgattaaaga tagtattgtg
    33901 cacttagatg aagttgccat ctatggtctg aactttttaa ttcaaaatga tttagcgcgc
    33961 ttaaaagcac attataaaat cgaagttcct gaagatgcag aaatcatagc gtggtttgat
    34021 gcgataggga aaaaacgtgg cttaattcga cgtggtaatg aaattgatta cgaagcagtc
    34081 attgaactga ttatttatga tattcgaaat gctaaaatag gaaattattg ttttgatatt
    34141 tttaaagata tgactgagga attagcaaat gacgctaaca attaaagaag taacgcagtt
    34201 gattaatgcg gttaatacaa tagaagaatt agaaaatcat gaatgctttt tagatgagcg
    34261 aaaaggtgta caaaatgcca tagccagacg cagaaaagcg ttagaacaag aacaagcttt
    34321 aaaagaaaag tatgctgaaa tgacttactt tgaaaatgaa atattaaaag agcatcctaa
    34381 tgctattatt tgtggtattg acgaagttgg aagaggacct ttagcaggtc cagtcgttgc
    34441 atgcgcaaca attttaaatt caaatcacaa ttatttgggc cttgatgact cgaaaaaagt
    34501 acctgttacg aaacgtctag aattaaatga agcactaaaa aatgaagtta ctgcttttgc
    34561 atatggtatc gctacagctg aagaaataga tgaatttaat atttataaag ctactcaaat
    34621 cgccatgcag cgagctattg atggattatc agtacaacca acgcatttat tgatagacgc
    34681 gatgacgctt gataatgcac tgactcaagt atctttaatc aagggtgatg caagaagtgt
    34741 atctattgca gcggcaagta tcatggcaaa ggtttttcgt gatgattata tgacacagtt
    34801 atctaaagat tatcctgaat atggttttga aaaaaacgcg ggttacggta ccaaacaaca
    34861 tttactagca atcgatgata ttggcattat gaaagagcat agaaaaagct ttgaacctat
    34921 aaaatcgtta ctgtaaatcg taaaattcaa ttaaatgata aaaaagtagc atttaagttt
    34981 acaatagcgc ttacattttt tataattgta agggaactta acctaagtaa caggaggatg
    35041 gaagatgaat atccacgagt atcaaggtaa agaaatattt cgttcaatgg gcgttgcagt
    35101 tccagaagga cgagtagcat ttactgctga agaagcggtg gagaaagcaa aagaattaaa
    35161 ttcagatgtt tatgttgtaa aagcacaaat tcatgctgga ggtagaggta aagcaggcgg
    35221 agtaaaaatt gctaaatctt tatcagaggt agaaacatat gcaaaagaat tattagggaa
    35281 aactttggtg acacatcaaa ctggtccaga aggtaaagaa attaagcgtt tatatatcga
    35341 agaaggttgt gctattcaaa aagaatatta cgttggattc gttattgatc gtgcgactga
    35401 ccaagtaaca ttgatggcgt ctgaagaagg gggcactgag attgaagaag ttgctgcgaa
    35461 gactcctgaa aagatcttca aagaaactat tgatccagta atcggacttt caccattcca
    35521 agcaagacga attgcgttta atattaatat tcctaaaaaa tctgttaaca aagctgctaa
    35581 attcttatta gcactttata atgtattcat tgaaaaagat tgttcaatcg tagaaatcaa
    35641 cccattagtt acaacagctg atggtgatgt attggcatta gatgctaaaa ttaattttga
    35701 tgataatgca ttattcagac ataaagatgt tgtagaatta cgtgatttag aagaagaaga
    35761 tccgaaagag attgaagcgt ctaaacatga tttatcatac attgcattag atggtgacat
    35821 cggatgtatg gttaatggtg caggtttagc catggcaaca atggatacga ttaatcattt
    35881 cggtggaaac ccagccaatt tcttagatgc aggcggaagc gctactagag aaaaagtaac
    35941 tgaagcattt aaaatcattt taggtgatga aaatgttaaa ggtatttttg taaacatttt
    36001 cggtggcatt atgaaatgtg atgttatcgc agaaggtatc gttgaagctg taaaagaagt
    36061 agatttaact ttaccactag ttgtacgctt agaaggtaca aatgttgagt taggtaaaaa
    36121 aatcttaaaa gactcaggat tagcaattga accagcagca acaatggctg aaggtgcaca
    36181 aaaaattgtt aaactagtca aagaagcata aggaaaggat gggagcacta agatgagtgt
    36241 atttatagat aagaatacta aagtaatggt acaaggtatt acagggtcta ctgccctttt
    36301 ccatacaaaa caaatgcttg attatggtac gaaaatagta gcaggtgtga cgcctggtaa
    36361 aggtggtcaa gttgttgaag gcgttcctgt tttcaacact gttgaagaag ctaaaaatga
    36421 aaccggggca acggtttcag tcatttacgt tccagcacca tttgctgcag actcaatttt
    36481 agaagcagct gatgcagact tagatatggt tatttgtatc actgaacata ttcctgtatt
    36541 agacatggtt aaagttaaac gctacttaca aggtagaaaa acacgtttag ttggtccgaa
    36601 ctgtccaggt gtgattacag cagatgaatg taaaattggt attatgcctg gctatattca
    36661 caaaaaaggt catgttggtg tagtatcacg ttcaggtaca ttaacatatg aagcagtgca
    36721 ccaattgact gaagaaggta ttggtcaaac tacagctgtt ggtattggtg gagacccagt
    36781 aaatggcaca aactttattg atgttttaaa agcattcaat gaagatgacg aaacgaaagc
    36841 agttgttatg attggtgaaa tcggtggtac ggctgaagaa gaagctgctg aatggattaa
    36901 agcgaatatg acaaaaccag ttgtaggctt tatcggtgga caaacagcac ctcctggaaa
    36961 acgtatggga catgctggtg caatcatttc aggtggtaaa ggtactgctg aagagaaaat
    37021 taaaacatta aatagttgtg gtgtgaaaac agcggcaaca ccttcagaaa ttggttcaac
    37081 attaattgaa gctgctaaag aagcaggaat ttatgaatca ttattaactg ttaataaata
    37141 aagttaaaag atgatataaa tggctatagc ccattccata ctttattaaa gtatcggaaa
    37201 tgggctattt gtcgtgcgat gaattttagt acacttttca tattttggaa aggcaagtta
    37261 attattttac ctccttcaat agctttctaa aacaaagt
//
LOCUS       DAKPJH010000013        36673 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.013, whole genome shotgun sequence.
ACCESSION   DAKPJH010000013 DAKPJH010000000
VERSION     DAKPJH010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 36673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36673
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.013"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            230..631
                     /locus_tag="OY092_000545"
     CDS             230..631
                     /locus_tag="OY092_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1075518.1"
                     /translation="MKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILL
                     TLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQ
                     QEKVELLNFISDAIASRATAMQNSLNAIIAV"
     gene            complement(751..1314)
                     /locus_tag="OY092_000546"
     CDS             complement(751..1314)
                     /locus_tag="OY092_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1075519.1"
                     /translation="MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPE
                     GHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENIEHHINDTHKGHIDAAIFNLGYL
                     PKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
                     KHAQVLQYQFLNQRNHAPFICAIEKIS"
     gene            complement(1311..2264)
                     /locus_tag="OY092_000547"
     CDS             complement(1311..2264)
                     /locus_tag="OY092_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500380.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HCX1075520.1"
                     /translation="MGNHFQYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRD
                     GTVAHGGCTFCSAAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAFTNTH
                     APVEVLKEKFEPVLKEPGVVGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELGLQTIH
                     QSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQMDV
                     QGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEEYTNLVVDQLEVIPPEMIVHRITGDGP
                     IDIMVGPMWSVNKWEVLNGIDAELARRNSYQGLRYKSKVKQ"
     gene            2375..3556
                     /locus_tag="OY092_000548"
     CDS             2375..3556
                     /locus_tag="OY092_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075521.1"
                     /translation="MNIPKSVWWLVIGMALNITGSSFLWPLNTIYMKQELGKSLTVAG
                     LVLMINSFGMVIGNLLGGSLFDKLGGYKTILIGTFTCLCSTTLLNFFHGWPWYAVWLV
                     MLGFGGGMIIPAIYAMAGAVWPNGGRQTFNAIYLAQNIGVAVGAARGGFVAEFSFNYI
                     FLANLIMYVVFALVAVTQFNIEINAKVKYPTHLDITGKKNKARFISLVLICAMFAICW
                     VAYIQWESTIASFTQSINISMAQYSVLWTINGIMILVAQPLIKPVLYLLKGNLKKQMF
                     VGIIIFMLSFFVTSFAENFTIFVVGMIILTFGEMFVWPAVPTIANQLAPDGKQGQYQG
                     FVNSAATVGKAFGPFLGGVLVDAFNMRMMFIGMMLLLVFALILLMVFKENNTQPKKID
                     A"
     gene            3844..6261
                     /locus_tag="OY092_000549"
     CDS             3844..6261
                     /locus_tag="OY092_000549"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HCX1075522.1"
                     /translation="MLNYNHNQIEKKWQDYWDENKTFKTNDNLGQKKFYALDMFPYPS
                     GAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTK
                     KNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDEVAVNWCP
                     ALGTVLSNEEVIDGVSERGGHPVYRKPMKQWVLKITEYADQLLADLDDLDWPESLKDM
                     QRNWIGRSEGAKVSFDVDNTEGKVEVFTTRPDTIYGASFLVLSPEHALVNSITTDEYK
                     EKVKAYQTEASKKSDLERTDLAKDKSGVFTGAYAINPLSGEKVQIWIADYVLSTYGTG
                     AIMAVPAHDDRDYEFAKKFDLPIIEVIEGGNVEEAAYTGEGKHINSGELDGLENEAAI
                     TKAIQLLEQKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLL
                     PETDEIKPSGTGESPLANIDSFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPK
                     NENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFN
                     QGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGS
                     RRFLDRVWRLMVNEDGTLSSKIVTTNNKSLDKVYNQTVKKVTEDFETLGFNTAISQLM
                     VFINECYKVDEVYKPYIEGFVKMLAPIAPHIGEELWSKLGHEESITYQPWPTFDEALL
                     VDDEVEIVVQVNGKLRAKIKIAKDTSKEEMQEIALSNDNVKASIEGKDIMKVIAVPQK
                     LVNIVAK"
     gene            6283..6594
                     /locus_tag="OY092_000550"
     CDS             6283..6594
                     /locus_tag="OY092_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HCX1075523.1"
                     /translation="MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD
                     TIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEANGIDAVNVEGGMHAWGDEGLEIKS
                     I"
     gene            6920..13489
                     /gene="sasC"
                     /locus_tag="OY092_000551"
     CDS             6920..13489
                     /gene="sasC"
                     /locus_tag="OY092_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored repetitive surface protein SasC"
                     /protein_id="HCX1075524.1"
                     /translation="MNLLKKNKYSIRKYKVGIFSTLIGTVLLLSNPNGAQALTTDQNV
                     QGESNQALPGNSHNTNVDTSRDITNSSQNTPNQHTTANASTNQALANHHNVGESNQVV
                     PMPVQPSTSSASNNNHSDAKSTATESAANTNNNLSSNNNTLNVPNNTDNNDSARHLTL
                     KEIQEDVRHSSDKPELVAIAEEASNRPKKRSRRAAPADPNATPADPTATPADPAAGNG
                     SAPVAITAPYTPTTDPNANNIGQNAPNEVLSFDDNGIRPSTNRSVPTVTVVDNLPGFT
                     LINGGKVGVFSHAMVRTSMFDSGDAKNYQAQGNVIALGRIRGNDVNDHGDFNGIEKTL
                     TVNPNSELIFEFNTMTTKNYQGMTNLVIKNADNDAVIGEKVVAYGPIWRLFKVPENVS
                     HLKIQFVPKNDAITDPRGIYQLRDGYKYYDFVDSIGLHSGSHVYVERRTMEPTATNNK
                     EFSVTTSLKNNGNFGASFNTDDFVYKIQLPEGVEYVNNSLTKDFQSGNSGVDINDFNV
                     TYDAANRIITIKSTGGGSGNSPARLMPDKILDLKYKLRVNNVPTPRTVTFNDTLTYKT
                     FSQDFINSPAESHTVSTEPYTIDIIMNKDALQAEVDRRIQQADYTFASLDIFNDLKRR
                     AQTILDENRNNVPLNKRVSQADIDSLANQMQHTLIRSVDAENAVNRKVDDMEDLVNQN
                     DELTDEEKQAAIQVIEEHKNEIIGNIGDQTTDDGVTRIKDQGIQTLSRDTATPVVKPN
                     AKQAIRDKAAKQREIINNTPDATQDEIQDALNQLTTDETDAIDNVTNATTNADVETAK
                     NNGINTIGAVVPQVTHKQAARDAINQATATKRQQINSNREATQEEKNAALNELTQATN
                     HALEQINQATTNDDVDTAKGDGLNAINPIAPVTVVKQAARDAVSHDAQQHIAEINANP
                     DATQEERQAAIDKVNAAVAAANANILNANTNADVEQVKTNAIQGIQAIEPATKVKTDA
                     KNAIDQSAETQHNAIFNNNDATLEEQQAAQQLLDQAVATAKQNINAADTNQEVAQAKD
                     QGMQNIVVIQPATQVKTDARNTVNEKAREVITNINATPGATREEKQEAIDRVNALKNR
                     ALTDIGVTSTTAMVNSIRDDAVNQIGAVQPHVTKKQTATGVLNDLATAKKQEINQNTN
                     ATTEEKQIALNQVDQELAAALNNINQADTNAEVDQAQQLGAQAINAIQPNIVKKPAAL
                     AQINQHYNAKLAEINATPDATDDEKNAAINTLNQDRQQAIESLNQANTNNEVDQAAIT
                     AENNIDAVQVDVVKKQAARDKITAEVAKRIEAVKQTPNATDEEKQAAVNQINQLKDQA
                     FNQINQNQTNDQVDATTNQAINAIDNVEAEVVIKPKAIADIEKAVKEKQQQIDNSIDS
                     TDNEKEVATQALAREKEKALVAIEQAQTNEQVNQAATDGITAIKIIQPETRVKPAARE
                     KINQKANELRAQINQDKEATAEERQAALDKINDLVTQAMTNITNDRTDQQVNDSTNQA
                     LGDIALVTPDHIIRAAARDAVKQQYEAKKQEIEQAEHATDEEKQVALNQLANNEKRAL
                     QNIDQAIANNDVKRVESNGIATLKGVEPHIVVKPEAQQAIKASADNQVESIKDTPHAT
                     TDELDEANQQINDTLKQGQQDIDNTTQDVAVNDVRNQTIKAIEQIKPKVRRKRAALDN
                     IDESNNNQLDAIRNTLDTTQDERNIAIAELNKIVNTIKNDIAQNKTNAEVDQTEADGN
                     NNIKVILPKVQVKPAARHSVSAKAEAQNALIDQSDLSTEEERLAAKHLVDQALNQAID
                     QINHADKTAQVNQNSIDAQKIISQIKPATTVKTTALQQIQNIATNKINLIKANNEATD
                     EEQNAAIAQVEQALIKAKQQIASAVTNADVAYLLHDGKNEIREIEPVINRKSTAREQL
                     TTLLNDKKQAIEANVQATVEERNSILAQLQNIYDTAIGQIDQDRSNAQVDKTASLNLQ
                     TIHDLDVHPIKKPDAEKTINDDLARVTHLVQNYRKVSDRNKADALKAITALKLQMDEE
                     LKIARTNADVDAVLKRFKVALGDIEAVITEKENSLLRIDNIAQQTYAKFKSIATPEQL
                     AKVKALIDQYVADGNRMIDEDATLNDIKQHTQFIVDEILAIKLPAEVTNVSPKVGQPA
                     PKVCTPIKKEDKQEVHKVEKELPNTGSEEMDLPLKELALITGAALLARRRTKNEKES"
     gene            complement(13606..14874)
                     /locus_tag="OY092_000552"
     CDS             complement(13606..14874)
                     /locus_tag="OY092_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075525.1"
                     /translation="MYQTIIIGGGPSGLMAAVAASEQSSNVLLIEKKKGLGRKLKISG
                     GGRCNVTNRLPYAEIIKNIPGNGKFLYSPFSIFDNESIIDFFESRGVKLKEEDHGRMF
                     PVSNKAQDVVDTLVTTIERQHVTIKEEEAVSRIEVKEDQTFTVHTQNNSYESHSLVIA
                     SGGTSVPQTGSTGDGYKFAQDLGHTITELFPTEVPITSAEPFIKSNRLKGLSLKDVEL
                     SVLKKNAKKRISHQMDMLFTHFGISGPAALRCSQFVYKEQKNQKTQHISMAIDAFPEL
                     NHEQLKQHITSLLSDTPDKIIKNSLHGLIEERYLLFMLEQAGIDENTTSHHLSNQQLN
                     DLVNMFKGFVFKVNGTLPIDKAFVTGGGVSLKEIQPKTMMSKLVPGLFLCGEVLDIHG
                     YTGGYNITSALVTGHVAGLYAGHYAHASME"
     gene            15280..16941
                     /locus_tag="OY092_000553"
     CDS             15280..16941
                     /locus_tag="OY092_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HCX1075526.1"
                     /translation="MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAP
                     FTYAYAPYNIAIAVATAGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGF
                     LVLYFLAPYISELTLARNVHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYK
                     SMGPTAVSEVTEQIARVIFILIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLW
                     YYWRKRKHNIDRMVESDYTDIDVSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHN
                     GALSLVGIPSQLQDIFFNMLNMSTNKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEM
                     HHQIRTSIGVLMFITVPASIGIMALAQPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAP
                     VAILISLLSVTASMLQGIDKQKLTVYVILASVVIKLALNYPLIMLFHTPGAILSTSIA
                     LLFAIGCNFYILKKYAKFKFSYSWIHFAKIFLYSFIMMLGVELVFFLANLFLEPTKLG
                     YLIIIILGVTVGILIYGTITIKTRLADEFLGEIPEKLRRRVRFLR"
     gene            16938..17633
                     /locus_tag="OY092_000554"
     CDS             16938..17633
                     /locus_tag="OY092_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HCX1075527.1"
                     /translation="MRIDKFLANMGVGTRNEVKQLLKKGFVNVNEQVIKSAKTHIEPE
                     NDKISVRGELIEYVENVYIMLNKPKGYISATEDHHSKTVIDLIPEYQHLNIFPVGRLD
                     KDTEGLLLITNDGDFNHELMSPNKHVSKKYEVISANPITEDDIQAFKEGITLSDGKVK
                     PAILTYIDNQTSHVTIYEGKYHQVKRMFHSIQNEVLHLRRIKIADLELDSNLDSGEYR
                     LLTENDFDKLNYK"
     gene            17650..18072
                     /locus_tag="OY092_000555"
     CDS             17650..18072
                     /locus_tag="OY092_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HCX1075528.1"
                     /translation="MAKGNLFKAILGIGGAVAAVLVTRKDSRDKLKAEYNKYKQDPQS
                     YKDNAKDKATQLGTIANETIKEVKTNPKEYANRLKNNPKAFFEEEKSKFTEYDNKTDE
                     SIEKGKFDDEGGVAPNNNLRIVTEEDLKKNKNALSDKE"
     gene            18275..19684
                     /gene="sapep"
                     /locus_tag="OY092_000556"
     CDS             18275..19684
                     /gene="sapep"
                     /locus_tag="OY092_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+)-dependent dipeptidase Sapep"
                     /protein_id="HCX1075529.1"
                     /translation="MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRK
                     ALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPV
                     VTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
                     KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMV
                     PDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIG
                     VNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGV
                     ITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPF
                     VQKLVTAYRNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQ
                     LFNATSIYLEAIYSLCVEE"
     gene            19688..20536
                     /gene="dat"
                     /locus_tag="OY092_000557"
     CDS             19688..20536
                     /gene="dat"
                     /locus_tag="OY092_000557"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HCX1075530.1"
                     /translation="MEKIFLNGEFVSPSEAKVSYNDRGYVFGDGIYEYIRVYNGKLFT
                     VTEHYERFLRSANEIGLDLNYSVEELIELSRKLVDMNQIETGAIYIQATRGVAERNHS
                     FPTPEVEPAIVAYTKSYDRPYDHLENGVNGVTVEDIRWLRCDIKSLNLLGNVLAKEYA
                     VKYNAVEAIQHRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYN
                     IPFKEETFTVDFLRNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKY
                     IESHSI"
     gene            21087..21878
                     /locus_tag="OY092_000558"
     CDS             21087..21878
                     /locus_tag="OY092_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001602611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HCX1075531.1"
                     /translation="MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAAL
                     SAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSM
                     LKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDV
                     NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNL
                     NKRMKWYTVIQSIGLVQWYEEQKRYKDMNTWLKFLNEVMNSNMFI"
     gene            21893..22537
                     /gene="trmB"
                     /locus_tag="OY092_000559"
     CDS             21893..22537
                     /gene="trmB"
                     /locus_tag="OY092_000559"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HCX1075532.1"
                     /translation="MRVRYKPWAEDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEI
                     GSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMSLTNLKIICNDAIELNEY
                     FKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAY
                     SLESMSQFGMYFTKINLNLHQEDDGSNILTEYEKKFSNKGSRIYRMEAKFHSQK"
     gene            23007..23849
                     /locus_tag="OY092_000560"
     CDS             23007..23849
                     /locus_tag="OY092_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCX1075533.1"
                     /translation="MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQI
                     NLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDID
                     YVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDY
                     SNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLW
                     VTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETL
                     VDNN"
     gene            complement(23974..24285)
                     /locus_tag="OY092_000561"
     CDS             complement(23974..24285)
                     /locus_tag="OY092_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HCX1075534.1"
                     /translation="MTKLKYIIPTIIAVAIVIISTISIIQFINRKRYNPVKVLNEVKS
                     YFMNVKGSYIVYEPFVHPETDKYRLVYQGGITTIKNGQNIHYDFYADAYTGEVINIVE
                     R"
     gene            24372..25448
                     /locus_tag="OY092_000562"
     CDS             24372..25448
                     /locus_tag="OY092_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HCX1075535.1"
                     /translation="MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFI
                     ENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITNITKNGMIQFTNLGGVANDIWQG
                     QRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
                     TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGL
                     RGAKASAEMIDPDVAFVVDCSPANDVKGNQPLSGELGKGTLIRIKDGTMILKPVFRDY
                     LLKLVEAHDIEHQYYMSPGGTDGGEIHKANIGIPTAVIGVCARYIHSTDSVFDIRDYF
                     AARSLLSEAICNLDNNQIETLQYK"
     gene            25513..25824
                     /locus_tag="OY092_000563"
     CDS             25513..25824
                     /locus_tag="OY092_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCX1075536.1"
                     /translation="MKQLESEQQFESLKQGATVFEFTAGWCPDCRVIEPDLPELEARY
                     PMFDFVSVDRDKFMDICIENGIMGIPSFLVYKNGELLGSYIGKERKSIEQIDAFLAQY
                     V"
     gene            25924..26781
                     /locus_tag="OY092_000564"
     CDS             25924..26781
                     /locus_tag="OY092_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HCX1075537.1"
                     /translation="MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIK
                     LNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQ
                     GVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSY
                     TTDEVKGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRN
                     KTGYDVMAHLTMEFFTKGLVPITSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEA
                     NRRKFNKDK"
     gene            26810..27406
                     /locus_tag="OY092_000565"
     CDS             26810..27406
                     /locus_tag="OY092_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HCX1075538.1"
                     /translation="MNLFYNPKYVGDVAFLQIEPVEGELNYNKKGNVVEITNEGNVVG
                     YNIFEISKDITIEEKGHIKLTDELVNVFQKRISEAGFDYKLNADLSPKFVVGYVETKD
                     KHPDADKLSVLNVNVGNDTLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGV
                     ASSGMICSMKELNLPNAPEEKGIMVLNDSYEIGQAFFE"
     gene            27427..31251
                     /locus_tag="OY092_000566"
     CDS             27427..31251
                     /locus_tag="OY092_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HCX1075539.1"
                     /translation="MSWFDKLFGEDNDSNDDLIHRKKKRRQESQNIDNDHDSLLPQNN
                     DIYSRPRGKFRFPMSVAYENENVEQSADTISDEKEQYHRDYRKQSHDSRSQKRHRRRR
                     NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNM
                     YSNNTNHRAKDSTPDYHKESFKTSEVPSAIFGTMKPKKLENGRIPVSKPSEKVESDKQ
                     KYDKYVAKTQTSQNKQLEQEKQNDSVVKQGTASKSSDENVSSTTKSMPNYSKVDNTIK
                     IENIYASQIVEEIRRERERKVLQKRRFKKALQQKREEHKNEEQDAIQRAIDEMYAKQA
                     ERYVGDSSLNDDSDLIDNSTDASQLHTNGIENETVSNDENKQASIQNEDTNDTHVDES
                     PYNYEEVSLNQVSTTKQLSDDEVTVSNVTSQHQSALQHNVEVNDKDELKNQSRLIADS
                     EEDGATNKEEYSGSQIDDAEFYELNDTEADEDTTSNIEDNTNRNASEMHVDAPKTQEH
                     AVTESQVNNIDKTVDNEIELATRHKKDDQTNLSVNSLKTNDVNDGHVVEDSSMNEIEK
                     HNAEITENVQNEAAESEQNVEEKTIENVNPKKQTEKVSTLSKRPFNVVMTPSDKKRMM
                     DRKKHSKVNVSELKPVQSKQAVSESKPASQAAPSSSSDSQESNTNAYKTNNMTSNNVE
                     NNQLIGHAETENDYQNAQQYSEQKPSADSTQTEIFEESQDDNQLENEQVDQSTSSSVS
                     EVSDITEESEETTHPNNTSGQQDNDDQQKDLQPSFSNQNEDTANENRPRTNQQDVATN
                     QAVQTSKPMIRKGPNIKLPSVSLLEEPQVIEPDEDWITDKKKELNDALFYFNVPAEVQ
                     DVTEGPSVTRFELSVEKGVKVSRITALQDDIKMALAAKDIRIEAPIPGTSRVGIEVPN
                     QNPTTVNLRSIIESPSFKNAESKLTVAMGYRINNEPLLMDIAKTPHALIAGATGSGKS
                     VCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNGLPHLVAPVITDVKAATQSLKWA
                     VEEMERRYKLFAHYHVRNITAFNKKAPYDERMPKIVIVIDELADLMMMAPQEVEQSIA
                     RIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTILDSGGAER
                     LLGYGDMLYLGSGMNKPIRVQGTFVSDDEIDDVVDFIKQQREPDYLFEEKELLKKTQT
                     QSQDELFDDVCAFMVNEGHISTSLIQRHFQIGYNRAARIIDQLEQLGYVSSANGSKPR
                     DVYVTEADLNKE"
     gene            31275..32588
                     /locus_tag="OY092_000567"
     CDS             31275..32588
                     /locus_tag="OY092_000567"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HCX1075540.1"
                     /translation="MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALR
                     NKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKIDVVSYNDFLGQIIDQYT
                     SVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPESDYFAFEACEYRRHFLS
                     YKPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAHNVKKGIIAWGDDEHLRKIEADVPI
                     YYYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAISY
                     LEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDDYAHHPREISATIETARKKYPHK
                     EVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEG
                     ASLINEDSINVLEQFDNAVILFMGAGDIQKLQNAYLDKLGMKNAF"
     gene            32662..33153
                     /locus_tag="OY092_000568"
     CDS             32662..33153
                     /locus_tag="OY092_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HCX1075541.1"
                     /translation="MDWILPIAGIIAAIAFLILCIGIVAVLNSVKKNLDYVAKTLDGV
                     EGQVQGITRETTDLLHKVNRLTEDIQGKVDRLNSVVDAVKGIGDSVQTLNSSVDRVTN
                     SITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYKANNVATDANHSYTSR
                     VDK"
     gene            33227..34585
                     /locus_tag="OY092_000569"
     CDS             33227..34585
                     /locus_tag="OY092_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075542.1"
                     /translation="MTQQQNNKRTLKNKHTYHNELLPNRKDFVVSFITGALVGSALGL
                     YFKNKVYQKADDLKVKEQELSQKFEERKTQLEETVAFTKERVEGFLNKSKNEQAALKA
                     QQAAIKEEASANNLSDTSQEAQEIQEAKKEAQAETDKSAEVSNKESKAVALKAQQAAI
                     KEEASVNNLSDTSQEAQEIQEAKKEAQAETDKSAAVSNEESKAVALKAQQAAIKEEAS
                     ANNLSDTSQEAQEIQEAKKEAQAETDKSEAVSNEESKAVALKVSKEESQAERLANAAK
                     QKQAKLTPGSKESQLTEALFAEKPVAKNDLKEIPQLITKKNDVSETVNTDNKDTVKQK
                     EAKFENGVITRKADEKTTNNTDVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHN
                     KKSSQGAKKQSSSSKSTQKNNQTSNKNSKATNAKSSNASKKSNAKVEKAKSKIEKRTF
                     ND"
     gene            34741..34824
                     /locus_tag="OY092_000570"
     CDS             34741..34824
                     /locus_tag="OY092_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075543.1"
                     /translation="MLFVTSLDYNSDIAHFKLKMEKYSIIK"
     gene            35279..36370
                     /locus_tag="OY092_000571"
     CDS             35279..36370
                     /locus_tag="OY092_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HCX1075544.1"
                     /translation="MSNKLESYRSEIVSLNHQILDLLSKRGELAQKIGEEKLKQGTRI
                     YDPQREKEMLNDLIDSNKGPFNDNTIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPE
                     DTIVTFDNGGIIGDGNKSFVFGPCSVESFEQVEAVAKNLHAKGEKFIRGGAFKPRTSP
                     YDFQGLGVEGLKILKQIKDKYDLNVVSEIVNPNDFEVADEYLDVFQIGARNMQNFELL
                     KEAGRTKKPILLKRGLSATIEEFVYAAEYIASQGNQNIILCERGIRTYEKATRNTLDI
                     SAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPDPSVALSDA
                     GQQMDLDEFQAFYDELKPLSDLYNAKKLK"
BASE COUNT        13655 a         5275 c         6773 g        10970 t
ORIGIN      
        1 tgatttgttt tatgtactat tatcttattt ctaaatatta actctattga ttattggttt
       61 ttatacttat ttaattttat tcaactttga caattgaata gaaagcaagt ttatttacac
      121 ttgtagtttt atgcataagt tagcacatac aagttttggg attgttggga tgtttgttaa
      181 tacttgtatg gtagctaaat atgtgattat taattgggag atgtttagca tgaaaaaagt
      241 aaataacgac actgtatttg ggattttgca attagaaaca cttttgggtg acattaactc
      301 aattttcagc gagattgaaa gcgaatacaa aatgtctaga gaagaaattt taattttact
      361 aactttatgg caaaaaggtt ctatgacgct taaagaaatg gacagatttg ttgaagttaa
      421 accgtataag cgtacgagaa cgtataataa tttagttgaa ttagaatgga tttacaaaga
      481 gcgtcctgtt gacgatgaaa gaacagttat tattcatttc aatgaaaagt tacaacaaga
      541 gaaagtagag ttgttgaatt tcatcagtga tgcgattgca agtagagcaa cagcaatgca
      601 aaatagttta aacgcaatta ttgctgtgta agtttaatag cataaaaaga ggttttcatt
      661 aagttgaaaa cctctttttg ttgttggtat taatttttca aatgttgact actcaatcct
      721 aaattataaa tagtatagcg cagcaaatgc ttaagaaatt ttttctatgg cacaaatgaa
      781 tggagcatga ttacgttggt ttaaaaattg atattgcaaa acttgcgcat gcttttgatc
      841 caaagtactc aagtaatcaa gcaatgcatg cttctcaatt tgtccttcgc tatgaccatg
      901 atatataaca agtacaataa taccttcaat tgacattaat gatagcaatg aattaatagc
      961 ttggattgtc gtgtcaggct ttgtcacgat agatttatca cctttaggca aataacctag
     1021 gttaaagatg gctgcatcaa tatgaccttt atgtgtatca tttatatgat gttcaatatt
     1081 ttcatgtcca tcttttatta aagaaacatg attgaaatcc ttaactttat cacgtgtatt
     1141 ttccaaagct aaatcttgaa tgtcgaaacc ataaacatgt ccttctggta cttgttcggc
     1201 taaaaataaa gtgtcattgc cgttaccgca agttgcgtct acaacaatac tttctggtgt
     1261 tatatgttgt ttaataagtg tttttgaaaa agggagtata cgttctaatt tcattgcttc
     1321 accttagact tgtaacgcaa gccttgataa gaatttctac gtgctaattc agcatcgatg
     1381 ccatttaata cttcccattt attaacactc cacattggac cgaccatgat atctattgga
     1441 ccatcaccgg taattcggtg aacgatcatt tcagggggaa tcacttctaa ttgatccaca
     1501 actaggtttg tgtattcttc ttgagtcata aaagttaata aacctttatc gtattgtttt
     1561 accatcggtg taccttttaa caaatgaagt aaatgaattt taataccttg tacatccatt
     1621 tgtgcaactt ctttggcagt agccatcatc atgtcatagt cttcgccagg taagccatta
     1681 atgatgtgtg tacatacatt gatattatgc ttacgtaatt ttgccacacc atcataataa
     1741 gttttcatat catgggcacg attgattaaa tcagatgttg attgatggat tgtttgtagt
     1801 cctaattcaa cccataagta tgttcgttga ttcaaatctg ctaaatattc gacaacatcg
     1861 tctggtagac agtcaggacg cgtaccaata gataatccca caacacccgg ttctttaagt
     1921 acaggttcga atttttcttt taatacttca actggtgcat gtgtatttgt aaatgcctga
     1981 aaataagcaa tatattttcc ttcgtgccat ttctcatgca tcttttcctt aatttcttta
     2041 aattgtactg cgattgaatc tgcacgatta cctgcaaagt ctccgctacc tgcagcagaa
     2101 caaaatgtac atccaccatg tgctacagtg ccatcgcggt taggacagtc aaacccgcca
     2161 tccaatgcaa ctttaaatat tttttgtcca aatttatttt ttaaatggta attccacgtg
     2221 tgataacgtt tgttttcaaa agcgtattgg aaatgattgc ccatatgtca ttttcctttc
     2281 tataaaaaaa agagttctaa gtacagattt taacatattt taatgttata gtgtttatta
     2341 tagtttgaca aaaaagagag aggaactatg aaatatgaat atacctaaat cagtctggtg
     2401 gctagtaatt ggcatggcgt taaatattac tggttccagt tttttgtggc ctttaaatac
     2461 aatttatatg aaacaagaac ttggaaaaag tttaactgtt gctggtttag tgctaatgat
     2521 aaattcattt ggcatggtta ttggaaactt attaggtggt tcactatttg ataaattagg
     2581 tggatacaag acgattttaa ttggaacttt cacttgtctt tgtagtacaa cgctacttaa
     2641 tttctttcac gggtggcctt ggtatgctgt atggcttgta atgttagggt ttggtggcgg
     2701 aatgattatt cctgcgatat acgctatggc tggagcagtg tggccaaatg gcggaagaca
     2761 aacgtttaat gcgatatact tagcgcaaaa tattggtgtg gctgtcggtg ctgcaagggg
     2821 cggctttgtc gcagaattta gctttaacta tatcttttta gccaatctta ttatgtatgt
     2881 tgtgtttgcg cttgtcgcgg taacgcaatt taatattgaa attaatgcga aagttaaata
     2941 tccaactcat ttagatatta ctggtaaaaa gaataaagca agatttattt cattagtact
     3001 aatttgtgca atgtttgcaa tttgttgggt tgcgtatatt caatgggagt ctacaatcgc
     3061 atcatttaca caatctatta atatttcaat ggcacaatat agtgttttat ggacaattaa
     3121 cggaataatg attttagtag cacaaccatt aattaaaccg gttctctatc tgttaaaagg
     3181 aaacttaaag aagcaaatgt ttgtcggcat catcattttt atgttgtcgt tctttgtcac
     3241 gagttttgcc gaaaacttta caatatttgt tgtcggtatg attattttaa cttttggaga
     3301 aatgtttgta tggccagcag ttccaactat agccaatcag ttagcgccag atggtaagca
     3361 aggacagtac caaggttttg tgaattcagc tgctacagta ggaaaagcat ttggtccatt
     3421 tcttggtggt gtattagttg atgcgtttaa tatgcgcatg atgtttatcg gtatgatgct
     3481 actacttgta tttgcattaa tattattaat ggttttcaag gagaataata cgcaacctaa
     3541 aaaaatagat gcataatgag taaatagaat taacgttata gacttgaaat aaatgtcgtt
     3601 ataacataat attaatttgt ataatttaat ttcgtttgga gcttttctac agaaagctag
     3661 tgatgctgag agctagtgtt aaggactaaa tgtaaatcgt attaatttta aattgaatga
     3721 atgacatctc ttactattaa aatgagtgca caatttttgt gaaatagggt ggtaacgcgg
     3781 caaatgtcgt ccctatgtaa atagaatagt tagaggtgtc ttttttattg aataggagga
     3841 aatgtgttga attacaacca caatcaaatt gaaaagaaat ggcaagacta ttgggacgaa
     3901 aataaaacat ttaaaacaaa tgataactta ggtcaaaaga aattttatgc tttagacatg
     3961 tttccatatc catcaggtgc tggtttacat gttggacatc ctgagggcta tacagcaaca
     4021 gatatcattt caagatataa aagaatgcaa ggatataatg tattacatcc gatggggtgg
     4081 gatgcattcg gattaccagc agagcaatat gctttagaca ctggcaacga cccacgtgaa
     4141 tttacaaaga aaaatatcca aacttttaaa cgacaaatta aagaattagg gttcagttat
     4201 gattgggatc gtgaagttaa tacaacagat ccagaatact ataaatggac acagtggatt
     4261 ttcatacagt tatataacaa aggtttagca tacgttgatg aagttgcagt taactggtgt
     4321 ccagcattag gcactgtttt atctaacgaa gaagtgattg atggtgtctc tgaacgtggt
     4381 ggacatccag tttatcgtaa gccgatgaaa caatgggtac ttaaaatcac agaatatgca
     4441 gatcaattat tagcagattt agatgattta gattggcctg agtctttaaa agatatgcag
     4501 cgcaattgga ttggacgttc tgaaggggcc aaagtttcat ttgatgtaga taatacggaa
     4561 ggaaaagtag aagtatttac gactagacca gatacaatct atggtgcatc attcttagtc
     4621 ttaagtcctg aacatgcatt agttaattca attactactg atgaatataa agaaaaagta
     4681 aaagcttatc aaacagaagc ttctaaaaag tcagatttag aacgtacaga tttagcaaaa
     4741 gataaatcag gtgtgtttac tggtgcatat gcaattaatc ctttatctgg tgaaaaagta
     4801 caaatttgga ttgctgatta tgtattatca acatatggta ctggagcaat tatggcagta
     4861 ccagcgcatg atgacagaga ttatgaattt gctaaaaagt ttgatttgcc aatcattgaa
     4921 gtcatcgaag gtggaaatgt tgaagaagca gcatacactg gtgaaggtaa acatattaat
     4981 tctggtgaac ttgatggttt agaaaatgaa gcggcaatta ctaaagctat tcaattatta
     5041 gagcaaaaag gtgctggcga aaagaaagtt aattacaaat taagagattg gttattcagt
     5101 cgtcagcgtt attggggcga accaattcct gtcattcatt gggaagatgg aacaatgaca
     5161 actgttcctg aagaagagct accattgttg ttacctgaaa cagatgaaat caagccatca
     5221 gggactggtg agtctccact agctaatatt gattcatttg taaatgttgt agatgaaaaa
     5281 acaggtatga aaggacgtcg tgaaacaaat acaatgccac aatgggcagg tagttgttgg
     5341 tattatttac gttacatcga tcctaaaaat gaaaatatgt tagcagatcc tgaaaaatta
     5401 aaacattggt tacctgttga tttatatatc ggtggagtag aacatgcggt tcttcactta
     5461 ttatatgcaa gattttggca taaagtcctt tatgatttgg gtatcgtacc tactaaagaa
     5521 cctttccaaa aattatttaa ccaaggtatg attttaggag aaggtaatga gaagatgagt
     5581 aaatctaaag gaaatgtaat caatcctgat gatatagtac agtctcatgg tgcagatact
     5641 ttacgtcttt acgaaatgtt tatgggacct ttagatgctg caattgcatg gagtgaaaaa
     5701 ggattagatg ggtctcgtcg attcttagat cgcgtatggc gtttaatggt aaatgaagat
     5761 ggaacattga gttcaaaaat tgtaactaca aataataaat ctttagataa agtttataac
     5821 caaactgtta aaaaggtaac agaagacttt gaaacattag gatttaatac tgctattagt
     5881 caattaatgg tatttattaa tgagtgttat aaagttgatg aagtttataa accttacatt
     5941 gaaggcttcg ttaaaatgtt agcacctatt gcaccacata tcggtgaaga attatggtca
     6001 aaattaggac atgaagagtc tattacgtac caaccttggc caacttttga cgaagcacta
     6061 cttgtagatg atgaagtaga aatcgttgtt caagtaaatg gtaaattgag agctaaaatt
     6121 aaaattgcta aagatacatc aaaagaagaa atgcaagaaa ttgccttatc taatgacaat
     6181 gttaaagcga gtattgaagg taaagacatc atgaaagtca tcgctgttcc tcaaaaatta
     6241 gtcaatattg tagctaaata atgttttaag gaggactttg aaatgaagtc aattactaca
     6301 gatgaattaa aaaacaaact tttagaatct aaaccagttc aaattgttga tgttcgtact
     6361 gacgaagaaa cagcaatggg atatattcct aatgcaaagt tgattccaat ggataccatt
     6421 ccggataatt taaattcatt taataaaaat gaaatatatt atattgtatg tgctggtgga
     6481 gttcgaagcg ctaaagttgt agaatattta gaggcaaatg gcattgatgc cgtaaatgtc
     6541 gaaggcggca tgcacgcatg gggcgatgaa ggtttggaaa taaaaagtat ttaaagtagt
     6601 gacataattt aaaataatat tacatttgta atgacaccaa gtaacgtttc ggttgcttgg
     6661 tgttttttgg tatgaattac tttctgttac aaaacattct aaagcgttct tgttatgttt
     6721 tattaagatt ttaattacaa aacggaaact aaattgtaat aaaataaaac tttattttat
     6781 aaaatgatga tgataaaatt gagtgaactt aaaatattgt acaaaataat atagctataa
     6841 acataatatg agggagcgta tatttttagc ataattctta acaacacagc agagaacaga
     6901 caaccaggag gaaaatgaaa tgaatttgtt aaagaaaaat aaatatagta ttaggaagta
     6961 taaagtaggc atattctcta ctttaatcgg aacagtttta ttactttcaa acccaaatgg
     7021 tgcacaagcc ttaactacgg atcaaaatgt tcaaggtgag tcaaatcaag cattacctgg
     7081 aaactcacat aatacaaatg tcgatactag tagagatatt acaaatagtt cgcaaaatac
     7141 acctaatcaa catacgacgg caaatgcatc aacaaaccaa gctttggcta atcatcataa
     7201 cgttggtgag tcaaatcaag ttgtgccaat gccagtacag cctagtacgt catctgcatc
     7261 aaacaataat cattctgatg ctaagtcaac agcaactgag tcagcggcga atacaaataa
     7321 taatttatca tcaaataaca atacattaaa cgtgcctaat aatacagata acaatgattc
     7381 agcgcgtcat ctgactttaa aagaaattca agaagatgtt cgtcattctt cagataagcc
     7441 agagttagtt gcgattgctg aagaagcatc taatagaccg aaaaaaagaa gcagacgtgc
     7501 tgcgccagca gatcctaatg caacaccagc agatccaacg gctacaccag cagacccagc
     7561 ggcaggaaac ggtagtgcac cagttgcaat tacagcgcca tacacgccaa caactgatcc
     7621 caatgccaat aatataggac aaaatgcacc taacgaagtg ctgtcatttg atgataacgg
     7681 tattagacca agtacgaacc gctctgtgcc aacagtaacc gtcgttgata atttaccagg
     7741 ttttacatta attaatggtg gtaaagtagg ggtatttagt catgcgatgg taagaacgag
     7801 tatgtttgat tcaggagatg ctaagaacta tcaagcacaa ggcaatgtaa ttgcgttagg
     7861 tcgtattaga ggtaatgatg taaatgacca tggcgatttt aatggtatcg agaaaacatt
     7921 aacagtaaat ccgaattctg aattaatctt tgaatttaat acaatgacta ctaaaaacta
     7981 tcaaggtatg acaaatttag tcattaaaaa tgctgataat gatgcagtta ttggtgaaaa
     8041 agtagtcgct tatggtccga tttggcgctt atttaaagta cctgaaaatg ttagtcattt
     8101 aaaaatacaa tttgttccta aaaatgacgc aataacagat ccgcgtggca tttatcaatt
     8161 acgtgatggt tataaatact atgactttgt tgactctatc ggtctacatt ctgggtcgca
     8221 tgtctatgtt gaaagacgta caatggagcc aacagcaaca aataacaaag aattttcagt
     8281 tacaacgtca ttaaagaata atggtaactt tggcgcttca tttaatacag atgattttgt
     8341 atataaaatt caattacctg aaggtgttga atatgtaaat aattcattga ctaaagattt
     8401 ccagagcggt aattcaggtg ttgatatcaa tgattttaat gtgacgtatg acgcagcaaa
     8461 tcgaattatt acaattaaaa gtactggtgg aggttcaggg aattcaccgg cacgacttat
     8521 gcctgataaa atattggatt tgaagtataa gctacgtgtg aacaatgtgc caacaccaag
     8581 aacagtaaca tttaacgata cgttaacgta taaaacattt tcacaagatt ttattaattc
     8641 acctgcagaa agtcatacag taagcactga accgtataca atcgatatca tcatgaataa
     8701 agacgcacta caagctgaag ttgatagacg tattcaacaa gcggattata catttgcatc
     8761 attagatatt tttaatgatc ttaaaagacg cgcacaaaca attttagatg aaaaccgtaa
     8821 caatgtacct ttaaacaaaa gagtttctca ggcagatatc gattcattag caaatcaaat
     8881 gcaacatacg ttaattcgaa gtgttgacgc tgaaaatgcc gttaatagaa aagttgatga
     8941 catggaagat ttagttaacc aaaatgatga actgacagat gaagaaaaac aagcagcgat
     9001 tcaagtcatc gaggaacata aaaatgaaat tattggaaat attggtgacc aaacgactga
     9061 tgatggtgtt actagaatta aagatcaagg tatacagact ttaagtagag acactgcaac
     9121 accagttgtt aaaccaaatg ctaaacaagc aatacgtgat aaagctgcga aacaaagaga
     9181 aattatcaat aacacaccag atgctactca agatgaaatt caagatgcat taaatcaatt
     9241 aacaacggat gaaacagatg ctattgataa tgttacgaat gctactacca atgctgatgt
     9301 tgaaacagct aaaaataatg gtattaatac tattggagct gttgtccctc aagtaacaca
     9361 caaacaagca gcaagagatg caattaacca agcaacagca acaaaaagac aacagataaa
     9421 tagtaataga gaagcaacac aagaagagaa aaatgcagca ttgaatgaat taacgcaagc
     9481 tacgaaccac gctttagagc aaatcaatca agcgacaacc aatgatgatg tggatacagc
     9541 caaaggtgat ggtctgaatg ccattaatcc tattgcgcct gtaactgttg tcaagcaggc
     9601 agcaagagat gccgtatcac atgatgcaca acaacatatc gctgagatca atgctaatcc
     9661 tgatgcgact caagaagaaa gacaggcagc gattgacaaa gtaaatgctg ctgtagctgc
     9721 tgcgaatgct aacattttaa atgctaatac caatgcagat gtggagcaag tgaagacaaa
     9781 tgcaattcaa ggtatacaag ccattgaacc agctacaaag gttaaaacag atgctaaaaa
     9841 tgctattgat caaagtgctg aaacgcaaca taatgcgata tttaataata atgatgcgac
     9901 cttagaagag caacaagcag cacaacaatt gcttgatcaa gctgtagcca cagcgaagca
     9961 aaatattaat gcagcagata cgaatcaaga agttgcacaa gcaaaagatc aaggtatgca
    10021 aaatatagtt gtgattcaac cagcgacaca agttaaaacg gatgctcgta atactgtaaa
    10081 tgaaaaagca cgtgaggtga taacaaatat caatgctaca cctggtgcga ctcgagaaga
    10141 gaaacaagaa gcgatagatc gtgtcaatgc acttaaaaat agagcattaa ctgatatcgg
    10201 tgtgacgtct actactgcga tggtcaatag cattagagac gatgcagtca atcaaatcgg
    10261 tgctgttcaa ccgcatgtaa ctaagaagca aacagctaca ggtgtattaa acgatttagc
    10321 aactgctaaa aagcaagaaa ttaatcaaaa tacaaatgca acaactgaag aaaagcaaat
    10381 agcattaaat caagtagacc aagaattagc agctgcactt aataatataa atcaagctga
    10441 tacaaacgcg gaagtagatc aagcgcaaca attaggtgca caagcaatta atgcgattca
    10501 gccaaatatt gtaaaaaaac ctgcagcatt agcacaaatc aatcagcatt ataatgctaa
    10561 attagctgaa atcaatgcta caccagatgc aacagatgat gagaaaaatg ctgcaattaa
    10621 tacgttgaat caagacagac aacaagctat tgaaagtctt aatcaagcga ataccaataa
    10681 tgaagtagac caagctgcga taacagcaga aaataatatt gatgctgttc aagttgacgt
    10741 agtgaaaaag caagcagcac gagataaaat cactgctgaa gtggcgaaac gtattgaagc
    10801 ggttaaacaa acacctaatg caactgatga agaaaagcag gctgctgtta atcaaatcaa
    10861 tcaacttaaa gatcaagcat ttaaccaaat taatcaaaac caaacaaatg atcaggtaga
    10921 cgcaactaca aatcaagcga taaatgctat agacaatgtt gaagctgaag tagtaattaa
    10981 accaaaggca attgcagata ttgaaaaagc tgttaaagaa aagcaacagc aaattgataa
    11041 tagtattgat tcaacagata atgagaaaga agttgctaca caagcattag ctagagaaaa
    11101 agaaaaagcc cttgtagcaa ttgaacaagc tcaaacgaac gagcaagtga atcaagcggc
    11161 aacagatggt ataactgcga taaaaattat tcaacctgaa actcgagtta aaccagcagc
    11221 acgtgaaaaa atcaatcaaa aagcgaatga attacgtgcg caaatcaatc aagataaaga
    11281 agcgacagca gaagaaagac aagcggcgtt agataaaatc aatgatttag ttactcaagc
    11341 tatgacaaat atcacgaatg atagaacaga tcagcaagtt aacgactcaa caaatcaagc
    11401 gcttggagac attgcattag tgacgcctga ccatattatt agagcagctg ctagagatgc
    11461 agtaaagcaa caatatgagg ctaaaaagca agaaatagag caagcggaac atgcgactga
    11521 tgaagaaaaa caagttgctt taaatcaatt agcgaataat gaaaaacgtg cattacaaaa
    11581 catcgatcaa gcaatagcga ataatgatgt gaaacgtgtt gaatcaaatg gtattgctac
    11641 gttaaaaggc gtagaaccgc acattgtggt taaacctgaa gctcaacaag ccataaaagc
    11701 gagcgcagat aatcaagtag aatctataaa agatacacca catgctacga ctgatgaatt
    11761 agatgaagca aaccaacaaa taaacgacac acttaaacaa ggtcaacaag atatagacaa
    11821 tacaacacaa gatgtagctg taaatgatgt tagaaatcaa acgattaagg caatcgaaca
    11881 aattaaaccg aaagttagac gcaaacgtgc agcgttggat aacattgatg aaagtaataa
    11941 taaccaactc gatgcaatcc gaaatacgct agatactacg caagatgaac gaaatattgc
    12001 tattgctgag ttaaataaaa ttgtaaatac tatcaaaaat gacattgcgc aaaacaaaac
    12061 gaatgcagaa gtggatcaaa ctgaggcgga tggtaacaat aacatcaaag tgattttacc
    12121 taaagttcaa gttaaaccag cagcgcgtca ttctgttagc gcaaaagctg aagctcaaaa
    12181 tgcacttatt gatcaaagtg atttatctac cgaagaagaa agattagctg ctaaacattt
    12241 agtagatcaa gcacttaatc aggctattga tcagattaat catgctgata agactgcaca
    12301 agttaatcaa aatagtatcg atgctcaaaa gataatttca caaattaaac cagcgacaac
    12361 agttaaaaca acagcactac aacaaattca aaatatcgct acaaataaaa taaatttaat
    12421 taaagcaaat aatgaagcga cagatgaaga acaaaatgct gcaatagcac aagtagaaca
    12481 agcattaata aaagcgaaac aacaaattgc aagtgcagtg acgaatgctg atgtagcata
    12541 tctattgcat gatggtaaaa atgaaattcg tgaaattgaa cctgttatta atagaaaatc
    12601 aactgcgcga gaacaattaa caacattgct caatgataaa aaacaagcaa ttgaagcgaa
    12661 tgttcaagca acggtagaag aaagaaatag tattttagcg cagttacaaa acatttatga
    12721 cactgctatt ggacaaattg atcaagatcg tagcaatgca caagttgata aaacagcatc
    12781 attaaatcta caaacaatac atgatttaga tgtacatcct attaaaaagc cagatgctga
    12841 aaaaacgatt aatgatgatc ttgcacgtgt tacacattta gtgcaaaatt atcgaaaagt
    12901 aagtgatcgt aataaggctg atgcattaaa agctataact gcattaaaat tacaaatgga
    12961 tgaagaatta aaaatagcac gcactaatgc tgatgttgat gcagttttaa aacgatttaa
    13021 agttgcatta ggcgatatag aagcagtaat tactgaaaaa gaaaatagct tactgcgcat
    13081 tgataacatt gctcaacaaa catatgcgaa attcaaatca atcgcaacac cagaacaatt
    13141 agctaaagta aaagcattaa ttgatcaata tgttgcagat ggcaatagaa tgattgatga
    13201 agatgcgaca ttaaatgaca tcaaacaaca tacgcaattc attgttgatg aaattttagc
    13261 aattaaattg ccagctgaag tgacgaatgt atcaccaaaa gtggggcaac ctgctccaaa
    13321 agtttgtacg cctattaaaa aagaagataa acaagaagtg cacaaagttg aaaaagaact
    13381 tccaaatact ggttctgaag aaatggattt accattaaaa gaattagcgc taattacagg
    13441 cgcagcatta ttagctagaa gacgtactaa aaatgaaaaa gaatcataat taacgaaatg
    13501 accttaatat aacgacactt tttagtgact cagttatatt agggtcattt ttaattaaat
    13561 gaaaaagttg atctattaaa gagaatcgaa ccaaatttta tactattatt ccattgatgc
    13621 atgtgcgtaa tgaccggcat ataatccagc gacatgtcct gttacgagtg cacttgtaat
    13681 attataacca ccagtataac catgtatatc taatacttca ccacataaaa ataatcccgg
    13741 aactaattta gacatcattg ttttaggttg aatttcttta agtgacacac caccacctgt
    13801 gacaaatgcc ttatctatag gtaatgtccc gtttacctta aatacaaacc ctttaaacat
    13861 atttactaag tcgttcaatt gttgatttga taagtgatgt gatgtggtat tttcatcgat
    13921 tccagcttgt tccagcatga acagtaagta gcgctcttca attagtccat gcaagctgtt
    13981 tttaatgatt ttatctggtg tgtccgataa taatgatgtg atgtgttgtt ttaattgttc
    14041 atggtttaat tcaggaaatg catcgattgc catagaaata tgctgtgtct tttgattttt
    14101 ttgttcttta taaacaaact gactacatct taatgcagct ggaccactga taccaaaatg
    14161 agtgaataac atatccattt gatgactaat gcgtttttta gcatttttct taagtactga
    14221 caattcaaca tcttttaaac ttaaaccttt tagacgattg gatttgatga aaggttcagc
    14281 tgatgtaatt ggaacttcgg tcgggaataa ctccgtaatg gtatgaccta aatcttgtgc
    14341 gaacttataa ccatcaccag ttgaacctgt ttgagggaca cttgttccac ctgaagcaat
    14401 cactagcgaa tggctttcat aactattatt ttgagtatgt acagtgaaag tttgatcttc
    14461 ttttacttcg attctactaa cagcttcttc ttctttaatc gttacatgtt ggcgttcgat
    14521 agttgtcact aatgtatcaa ctacgtcttg tgctttgttg gagactggaa acatacgccc
    14581 gtgatcttct tcttttaatt taacacccct agactcaaaa aaatctatga tggattcatt
    14641 atcaaaaatt gaaaagggac tatataaaaa ttttccattt ccaggaatgt tcttaataat
    14701 ttcagcatat ggtaatcgat tagttacgtt acatctaccg ccaccagata ttttgagttt
    14761 acgacctaga cctttctttt tttcaatgag taacacattg ctactttgtt cgcttgcagc
    14821 tactgccgcc attaagccgc taggtccgcc tccgataata attgtttgat acatatacgc
    14881 ttcctccaaa tttgttactg gacattcaat tgctatttta tagtactttt ttaaactttg
    14941 ctatatctct tgtgttatga gatgacaatt atgttgaata tatttataat gtgaacttca
    15001 taaaaatgaa gatgtatgtg tatgataaga atgatttttc tactgttatg cgatgttcat
    15061 ctcaaatagt agtataatgt tcatatgaaa ttttgtaata ttctaatcaa aatcgagtat
    15121 tcaatgacaa tgcgttgata attttgttat gataattcat tgaatatacg acaatgaaat
    15181 aaagttttgt gatatattca taataatgaa aaatgatttt acagagaaat agcttttagt
    15241 ttacaaaact ttaataaaca tgagataggg agattcgtaa tgagtgaaag taaagaaatg
    15301 gtgcgtggaa cctttttaat taccattagt atattaatta ccaaggtatt gggcgtactt
    15361 tttatcattc cattcaacta tttaattggt ggacaagaaa atatggcgcc gttcacatac
    15421 gcttatgcac catataatat tgcaattgca gttgcgacag caggtgtacc tttagcagct
    15481 tcgaaatatg ttgcgaaata taatgctatt ggggcatata aagtcagtca gaaattttat
    15541 aaatcgagtt ttattgtaat gagtattacc ggtgttttag gtttcttggt actgtatttc
    15601 ctagcacctt atatttctga attaacatta gctagaaacg tacatgataa aaacggttgg
    15661 tcagtcgatg atattacttg gattataaga atcattagta tggttgttat ctttattcct
    15721 gtattagcga catggagagg tatattccaa ggttataaat ctatggggcc aacagcagtg
    15781 tcagaagtaa ctgagcaaat tgcacgcgtg attttcatat taatcggaag ttatttagta
    15841 ctaaatgtct ttgatggctc tattttatta gccaatggta ttgctacttt tgcagcagca
    15901 gttggtgcga ttattggtat attcacactc tggtattact ggagaaagcg taagcataat
    15961 attgatcgta tggtcgaatc tgattacaca gatatagatg tgtcatatgg caagatgtat
    16021 aaagaaatca ttgcttatag tattccattc gttattgtta gtttgaatta tccattattt
    16081 aacttagtag atcaatttac acataacggt gctttatctt tagttggtat accttcacag
    16141 ttacaagata tattctttaa tatgctaaat atgtcaacta ataaaattgt tatgattcca
    16201 acatcattaa gtgctggttt tgcggtgagt ttaattcctt atattacaaa aacatttgca
    16261 gaaggtcgct tacatgaaat gcatcatcaa attagaacgt caattggagt attaatgttt
    16321 ataactgttc cagctagtat tggaattatg gccttggcgc aaccattatt cacagttttc
    16381 tatggttacg atccaattgt tttaggtcat gaccctaacc atgatggcag tcgattatta
    16441 ttctattatg cgcctgtagc aatactaatt tcactattaa gtgtaacggc gtcaatgtta
    16501 caaggtatag ataaacagaa attaacagtt tatgttattt tagcttctgt agttatcaag
    16561 ttagcgttaa actatccatt aattatgtta ttccatacac ctggtgcaat tttaagtact
    16621 agtatcgcat tattatttgc aattggatgt aatttctata ttcttaaaaa atatgcgaag
    16681 tttaaattca gctatagttg gattcatttt gcaaaaatat tcttgtattc atttattatg
    16741 atgctaggtg tagaattagt attcttcctt gcaaatctat tcttagaacc tactaaactt
    16801 ggttacttaa tcattattat tttaggtgtt acagtaggta ttctaattta cggtacaatc
    16861 actattaaaa cgcgtcttgc ggacgaattc ttaggtgaaa ttcctgaaaa attaagacgt
    16921 agagttaggt ttttacgatg agaatagata aatttttagc aaatatgggc gtcggtacac
    16981 gtaatgaggt caaacagtta cttaaaaaag gctttgtaaa tgtcaacgaa caagtaatta
    17041 aatcagcaaa aacacatata gaaccagaaa acgataagat atcagttcgt ggagaattaa
    17101 tagaatacgt tgaaaacgtc tatattatgt taaataagcc aaaaggttat atatcggcaa
    17161 ctgaagatca tcattcaaaa accgttattg atttaatacc tgaataccaa catctaaata
    17221 tttttccggt tggtcgtctt gataaagata cagaagggct attattgata acgaatgatg
    17281 gtgattttaa tcatgaatta atgagtccaa acaaacatgt ttctaaaaaa tatgaagtta
    17341 tttcagcaaa tcctatcact gaagacgaca ttcaagcttt taaagagggt ataacactgt
    17401 ctgatggcaa ggttaagcct gcaattttaa cttatattga taatcaaacg tcacacgtaa
    17461 caatttatga aggaaaatat catcaagtta aacgaatgtt tcatagcatt caaaatgagg
    17521 tattacattt aagacgtatc aaaattgctg atttagaatt ggacagcaat ctagattcag
    17581 gagaatatcg tttattaact gaaaatgatt ttgacaaatt aaattataaa taaaagggag
    17641 acgattgata tggcaaaagg taatttattt aaagcgattt taggtatagg tggcgctgta
    17701 gcagctgtac ttgttacacg taaagatagt cgtgacaagc tgaaagcaga atataataaa
    17761 tataaacaag atcctcaaag ctataaagat aatgctaagg ataaagcgac gcaattagga
    17821 acaattgcta atgaaacaat taaagaagta aaaacaaatc cgaaagaata tgctaataga
    17881 ttaaaaaata atccaaaagc atttttcgaa gaagaaaaat caaaatttac cgaatatgac
    17941 aataagactg acgaaagtat tgaaaaaggt aaatttgatg atgaaggtgg cgtagcacca
    18001 aataataatt tacgtatcgt cactgaagaa gacttaaaaa agaataaaaa tgcattatct
    18061 gataaagaat aaggcataca attaataagt tggtattgaa ctggcatatt aaatatataa
    18121 attaaaaaag gaacaaagca gctattaatg atttgtgtca tatcgatagc atcgttttgt
    18181 tcctttttat tattttctga catcttattg tagtttttat atcatttcat gtaaaataga
    18241 atttaactta tagaaaaaag gaagtcgatt tcgaatgtgg aaagaaaaag ttcaacaata
    18301 cgaagatcaa atcattaatg acttaaaagg attattagca attgaaagtg tgagagatga
    18361 tgcgaaagca tcagaagacg caccagttgg tccaggtcct cgtaaggcat tagactacat
    18421 gtatgaaatt gcacatagag atggatttac aacacatgat gtggatcata ttgcaggaag
    18481 aattgaggca ggtaaaggaa atgacgtatt aggtatctta tgtcatgttg acgttgttcc
    18541 tgctggtgat ggatgggata gtaatccgtt tgagccggtt gtaacagaag atgctatcat
    18601 agctagaggt acacttgatg acaaaggtcc aacaattgct gcttattatg caattaagat
    18661 attagaagat atgaatgtgg attggaagaa acgtattcat atgattattg gtacggatga
    18721 agaatctgat tggaaatgta cggatcgcta ttttaaaaca gaagaaatgc caacattagg
    18781 ttttgcacca gatgcagaat ttccgtgtat tcatggtgaa aaaggcatta caacatttga
    18841 tttagttcaa aataaactta ctgaagatca agatgaacct gattatgaat taataacttt
    18901 caaatctggt gaacgttaca acatggtacc tgatcatgca gaagcaagag tgcttgttaa
    18961 agaaaatatg acagatgtta ttcaagactt tgagtacttt ttagaacaaa atcatttaca
    19021 aggtgatagt actgttgata gtggcattct agttttaaca gttgaaggta aagcggttca
    19081 tggtatggat ccatctatcg gtgtgaatgc gggtctttac ttactaaaat tcttagcatc
    19141 attaaatctt gataataatg cacaagcgtt tgtagcattt agtaatcgct acttatttaa
    19201 ttcagatttt ggtgaaaaga tgggaatgaa attccataca gatgtcatgg gtgatgtgac
    19261 aactaacatt ggtgttatta catatgataa tgaaaatgca ggtcttttcg gtatcaattt
    19321 aagatatccc gaaggatttg aatttgaaaa agctatggat cgttttgcaa atgagattca
    19381 acaatatggc tttgaagtga aattaggtaa agtccaacca ccacattatg ttgataaaaa
    19441 tgatcctttt gtacaaaagt tagttactgc atatagaaat caaacaaatg atatgactga
    19501 accttatact ataggtggcg gtacttatgc gagaaactta gacaagggtg tagcatttgg
    19561 cgcaatgttt agtgattctg aagatttaat gcatcaaaaa aatgaatata tcactaaaaa
    19621 acagttattt aatgcaacta gtatttattt agaagcaatt tattcattat gtgtggagga
    19681 ataatatatg gaaaaaattt ttttaaatgg tgagtttgta agtccaagtg aagcaaaggt
    19741 ttcatacaac gacagaggat acgtatttgg cgatggtatt tatgaataca ttcgagtata
    19801 taatggtaag ttatttacag taacagaaca ttatgaaaga tttttacgta gtgccaatga
    19861 gattggttta gatttaaatt attctgtaga agaattaatt gaactatctc gtaaattagt
    19921 tgatatgaat caaattgaaa ctggggcaat ttatattcaa gcaacgcgtg gtgtagctga
    19981 aagaaatcat agcttcccga cacctgaagt agaaccagca attgttgctt atacaaagag
    20041 ttatgatcgt ccttatgatc atttagaaaa tggtgtgaat ggtgttaccg ttgaagatat
    20101 ccgttggtta cgttgcgata ttaaaagctt aaatttatta ggtaatgttt tagcgaaaga
    20161 atatgctgtg aaatataatg cagttgaagc aatccaacat cgaggcgaaa ctgtcactga
    20221 aggatcttca agtaatgctt atgcaattaa agacggtgtg atttatacac atccgattaa
    20281 caactatatt cttaatggta ttacacgaat tgtaattaaa aaaattgccg aagactataa
    20341 catcccattt aaagaagaaa cgtttactgt agatttcttg agaaatgcag atgaagttat
    20401 tgtttcaagt acttcagctg aggttacacc tgttattaaa ttagatggtg aaccagttaa
    20461 tgatggtaaa gttggcccaa ttacacgtca actacaagaa ggatttgaaa agtatataga
    20521 gtcacacagt atttaaaatt ctttcatcat atttttagat taaattactt aaatttatca
    20581 actttcgtaa gtgaattatg ttataattta aaacgaagct taaaagtgtt gtttagaaaa
    20641 cacatattag taaaaagtgc cattttgttt ctcattttca gttgaaatat aatgataaaa
    20701 attataaaat tttctatgag ttacaaatat gatgtgcatc atattttact aagtacgtaa
    20761 atgttacagt tcataaattt atgctaacca tgaaaatggg atagcaatta ttttgaaaac
    20821 tagagtttat cgcctacaaa agttacaaaa acatgtagtt ttagacacgg taacatttta
    20881 tgtcaagtaa gtgactatag aatgtatggt gtcaatgaaa gacaatacga tttaaattta
    20941 gtcgtgtaat gtaggcattg gttgaggatt taaaataatt atctggtcat aaaatttgta
    21001 ccagtatggt gttataaatt agaatatatg gctcttgaaa aacctatttc tagagccatt
    21061 ttctaattga aagtgaggtg gacgagttgg agcagtttta tcaattaggg tggacacttg
    21121 attcagcagg tggtgcatct ggtgaagcat atatggctga acaagatgga caaaagttgt
    21181 ttttaaaacg aaattcaaat ccatttattg cggcattatc agcagaaggt attgtgccca
    21241 aattagtatg gacgaagcgc atagaaacag gcgaggttgt tacagcacaa cattggaaaa
    21301 atggccgtga actatcttca aacgaaatga agcaaacaag agttgcacat ttattaaaga
    21361 agatacacaa ttctagacct ttattaagta tgttaaagcg tatggaaatg gaacctatta
    21421 ctcctgagat tatgcttaat aaaattaatg cctctttatc aagagaagtt ttaacacatc
    21481 atattgtgag aaaatcatta acctatttag aagagcatat accgagttta gattcacgtt
    21541 ttttcactgt tgtacatggc gatgtgaatc ataataattg gttattatct gatcgagatg
    21601 aactattttt agtcgattgg gaaggtgcaa tgatcgcaga cccggcaatt gatatcggaa
    21661 tgctgcttta caactatgtt ccacaacaac aatggtctga atggcttgaa acatatggtg
    21721 ttcaagagag cttgaattta aataaacgta tgaaatggta tacggtaatt caatctatag
    21781 gtcttgtgca atggtatgaa gagcaaaaaa gatataagga tatgaacact tggcttaaat
    21841 tcctaaatga agttatgaat agtaacatgt ttatttaaga ggagaataaa atatgagagt
    21901 tcgatacaaa ccatgggctg aagattattt aaaagatcat cctgaattgg ttgacatgga
    21961 cggtcaacat gcagggaaaa tgactgaatg gtttgataaa acgcaaccga tacacattga
    22021 aattggttcg ggtatggggc agtttattac aacattagct gctcaaaatc ctcatattaa
    22081 ctatatttca atggaacgtg agaaaagtat cgtttataaa gtattggata aagttaaaga
    22141 gatgagttta acaaatttaa agattatttg taatgatgcc attgaattaa atgaatattt
    22201 taaagacggc gaagtttcgc gtatttattt gaacttttca gatccatggc caaaaaatcg
    22261 tcatgcaaaa cgacgtttaa cgtatcatac gtttttagcg ttgtatcaac aaatcttaaa
    22321 tgatgaagga gatttacatt ttaaaactga taacagagga ctatttgcct acagtttaga
    22381 aagtatgtct caatttggaa tgtattttac aaaaataaat ctaaatttac atcaagaaga
    22441 cgatggcagt aatattctaa cagaatatga aaagaaattt tcgaataaag ggtcacgtat
    22501 ttatcgtatg gaagcgaaat tccattcaca aaaataaagc acttatgagg gtatgtacac
    22561 atacaatcat aagtgttttt tcgtactata atggttctat agtaaaatgg ttctataata
    22621 aatcggactg atagaaaaag tattttactt ttcatctgtc cgattttttg attttgaata
    22681 taaaaaagcg caattgcctc tgtaatttaa agtgaccaaa cctaaactaa aggagacaat
    22741 tgcgcctatg aacaatgtta tactaaatac ctttgattta aaagaataaa gcttgcattt
    22801 tacttggaaa ttttaattat taatttaaaa ttacagtccg atggttatga tgtatttaca
    22861 tataatatga ttgcattaat ctttataagt agttggaagt gtattagtgt ggggcgtttc
    22921 gtttttgttc gcatttatga atagtgatat gatgtaataa acacatgcta attgtaataa
    22981 cgaatacaga aagaataggt gatgttatga agatcgggga tatatctatt cattatctaa
    23041 atggtggcaa tacaaaaatg gatggcggtg caatgtttgg tgttgttccg aagccgttgt
    23101 ggtcaaagca atacaatgca aatgaacgaa atcaaatcaa tttaccgaca catccaattt
    23161 tgattcaaac ggctcaatat aatttgatta tagatgcggg tattggtaat ggtaaattat
    23221 ctgaaaagca attacgtaat tttggagtag atgaagaaag tcatataatt gctgatttgg
    23281 caaattataa tttaacgcca aaggatattg attatgtgct aatgacacat atgcattttg
    23341 atcatgctgc cggtttgact gatcaagcgg gacatgcaat ttttgaaaat gcgattcatg
    23401 ttgtgcaaca agatgagtgg catgagttta ttgcacctaa tataagaagt aaatcaactt
    23461 actgggataa gaataaaggc gattatagta acaagttgat tttattcgaa aaacattttg
    23521 aaccggttcc gggtatcaag atgcaacata gtggaggtca tagctttggc cacacgatta
    23581 ttacgattga aagtcaagga gataaagcag ttcatatggg tgatatattc ccaactactg
    23641 cacataaaaa tcctctatgg gtaacggcat atgatgatta tcctatgcaa tcgattcgtg
    23701 aaaaagaacg catgatacca tattttattc agcaacaata ttggttcttg ttttatcatg
    23761 atgaaaacta ctttgctgta aaatacagcg atgatggtga aaacatagat gcatatattt
    23821 tacgtgaaac attagttgat aataactaaa ataaagatgt attactaaac aaattttcaa
    23881 aaataaaaaa atgagccaca tccaatctta ctaattaggg tgtggctcat ttttaagttt
    23941 tacgatccaa atcaaatatg gataaaattc gtattaacgc tctacaatgt taatgacttc
    24001 accagtatat gcatctgcat aaaaatcata atgaatattt tgaccatttt taatagttgt
    24061 aattccacct tgataaacta aacggtattt atcagtttca ggatgaacga atggttcata
    24121 aacgatatat gagcctttga cattcataaa atatgatttt acttcattaa gtactttaac
    24181 gggattatag cgtttacgat taataaattg gatgattgaa atggtagaaa taattacaat
    24241 ggctactgca attattgttg gaattatata tttcagttta gtcatcattt aagctccctt
    24301 gatttcaaat tcatatcatt agtttaccat attgaagatg atataataac ttataaggag
    24361 tgagaacttt tatgaacata aataaaaaag taacattaca acgaattcaa actttaactg
    24421 agcttcatgg ggcaccaggt tttgaagaag aagtaaaaaa ttatatgact cagcaaatgg
    24481 cgccgtacgt agatgaattt attgaaaatc gtatgggtgg attttttggt gtgaaaaaat
    24541 ctaaaaatcc aaatgcaaaa cgtgtaatga ttgcagcaca tatggatgaa atcggattta
    24601 tgattacaaa tatcactaaa aatggaatga ttcaattcac aaatttaggt ggtgttgcaa
    24661 atgatatttg gcaaggacaa cgcttagtaa ttaaaaatag aaatggcgat aaaattatcg
    24721 gtgttgtttc taatatacct aaacattttc gtactggtag tgaaggtgca ccggaaatta
    24781 aagatttaac attagatata ggtgctcaaa atgaagatga ggtgcgtgag cgcggaatag
    24841 atataggaga tacaattgta cctcacacgc cattcacaca gttatctgaa catcgatata
    24901 gtgctaaagc atgggataat cgttatggtt gtgtcttggc aattgaaata ctagaattat
    24961 taaaagatat agaattagat gtagacttgt atgttggcgc aaatgttcaa gaagaggttg
    25021 gattacgagg tgcgaaagca tctgcagaga tgatagaccc agacgttgca tttgtagtcg
    25081 attgttcacc tgccaatgac gttaaaggaa accaaccatt atctggtgaa cttggtaaag
    25141 ggacgttaat tcgcataaaa gacggtacaa tgattttaaa gcctgtattt agagattatt
    25201 tattaaagtt agtagaagca catgacattg aacatcaata ctatatgtca ccaggtggaa
    25261 cagatggtgg agaaattcat aaagctaata ttggtattcc gactgcagtt attggtgtat
    25321 gtgcacgata tattcatagt acagactcag tatttgatat aagagactat tttgcagcta
    25381 gatctttact ttcagaagcc atttgtaatt tagataataa tcaaatagaa acattacaat
    25441 ataaataatc gggtaataac aactattatc tctaaatagt tatatataat cattaattaa
    25501 ggagacataa aaatgaaaca acttgaatca gaacaacaat ttgaatcttt aaaacaaggt
    25561 gctacagtgt ttgaattcac tgcaggctgg tgtccagatt gtagagtgat agaaccagat
    25621 ttaccggaat tagaagcgag atatcctatg tttgacttcg tatcagtaga ccgtgacaaa
    25681 tttatggata tttgtattga aaatggtatt atggggattc caagttttct agtatataaa
    25741 aatggtgaac tgcttggaag ttatattgga aaagaacgaa aatcaattga acagatagat
    25801 gcatttttag ctcaatacgt gtaatttaga ctagagaaaa acggggtaat actcgttttt
    25861 ctctgttact atgtgttgat ttattgtaaa ctattataag gtgcgaaatt aggagtgtta
    25921 catatgaata cctttcaaat gagagataaa ttaaaggaac gtttaagcca tttagacgtt
    25981 gattttaaat ttaatcgtga agaagaaact ttgcgtattt atcgaacaga taataacaaa
    26041 ggtatcacga ttaaacttaa cgctatagtc gcaaaatatg aagataaaaa agaaaaaatt
    26101 gtagatgaaa ttgtttatta cgttgatgaa gctattgcac aaatggcaga taaaaccctt
    26161 gagagtatat catctagtca aattatgcct gtcattagag cgactagctt tgataaaaaa
    26221 actaaacaag gtgttccttt tatctatgat gagcatactg cagaaacagc agtttattat
    26281 gcagtcgatt tagggaaatc atatcgtcta attgacgaaa gcatgttaga ggatttgaag
    26341 ttaactgaac aacaaataag agaaatgtct ctgtttaatg ttagaaaatt gtcaaattca
    26401 tatacgactg atgaagtaaa aggtaatatt ttttatttta ttaactcaaa tgacgggtat
    26461 gatgcaagta ggatactaaa tactgcattt ttaaatgaaa ttgaggcaca atgtcaaggc
    26521 gaaatgctcg tagcagtgcc acaccaagat gtgttaatta ttgcagatat acgcaataaa
    26581 acaggatatg atgtgatggc acatttaaca atggaatttt tcactaaagg tctagttcca
    26641 attacatcat tatcctttgg atataaacag ggtcatcttg aaccgatatt tattttaggt
    26701 aaaaataata aacaaaaaag agatccaaac gtgattcagc gtttagaagc aaatcgtcgt
    26761 aaatttaata aagataaata gaaataattg gataaggagt tttgtcataa tgaatttatt
    26821 ttacaatcct aaatatgtag gagatgtcgc atttttacaa attgaaccag ttgaaggtga
    26881 attaaactac aataaaaaag gtaatgttgt tgaaattact aatgaaggta atgttgtagg
    26941 ttataatatt tttgaaattt caaaagatat aacaattgaa gaaaaaggtc atattaaatt
    27001 aactgatgaa cttgtaaatg tattccaaaa gcgtatttca gaagctggtt ttgattataa
    27061 attaaatgct gatctatcac cgaaatttgt agttggctac gttgaaacta aagacaaaca
    27121 tcctgatgca gataaattaa gtgtactaaa tgtaaacgtt ggaaatgaca cattacaaat
    27181 tgtatgtggc gcgcctaacg ttgaagctgg acagaaagtt gttgttgcta aagtaggtgc
    27241 agtgatgcct agcggtatgg taattaaaga tgctgaatta cgtggtgttg cctcaagcgg
    27301 tatgatttgt tcaatgaaag aattgaattt acctaatgca cctgaagaaa aaggtattat
    27361 ggtattaaat gacagctatg aaattggaca agcatttttt gaataattaa ggaaggtagt
    27421 gaaaatatga gctggtttga taaattattc ggcgaagata atgattcaaa tgatgacttg
    27481 attcatagaa agaaaaaaag acgtcaagaa tcacaaaata tagataacga tcatgactca
    27541 ttactgcctc aaaataatga tatttatagt cgtccgaggg gaaaattccg ttttcctatg
    27601 agcgtagctt atgaaaatga aaatgttgaa caatctgcag atactatttc agatgaaaaa
    27661 gaacaatacc atcgagacta tcgcaaacaa agccacgatt ctcgttcaca aaaacgacat
    27721 cgccgtagaa gaaatcaaac aactgaagaa caaaattata gtgaacaacg tgggaattct
    27781 aaaatatcac agcaaagtat aaaatataaa gatcattcac attaccatac gaataagcca
    27841 ggtacatatg tttctgcaat taatggtatt gagaaggaaa cgcacaagtc aaaaacacat
    27901 aatatgtatt ctaataatac aaatcatcgt gctaaagatt caactccaga ttatcacaaa
    27961 gaaagtttca agacttcaga ggtaccatca gctatttttg gcacaatgaa acctaaaaag
    28021 ttagaaaatg gtcgtatccc tgtaagtaaa ccttcagaaa aagttgagtc agataaacaa
    28081 aaatatgata aatatgtagc taagacgcaa acgtctcaaa ataaacaatt agaacaagaa
    28141 aaacaaaatg atagtgttgt caaacaagga actgcatcta aatcatctga tgaaaatgta
    28201 tcatcaacaa caaaatcaat gcctaattat tcaaaagttg ataatactat caaaattgaa
    28261 aatatttatg cttcacaaat tgttgaagaa attagacgtg aacgagaacg taaagtgctt
    28321 caaaagcgtc gatttaaaaa agcgttgcaa caaaagcgtg aagaacataa aaacgaagag
    28381 caagatgcaa tacaacgtgc aattgatgaa atgtatgcta aacaagcgga acgctatgtt
    28441 ggtgatagtt cattaaatga tgatagtgac ttaatagata atagtacaga tgctagtcag
    28501 cttcatacaa atggcataga gaatgaaact gtatcaaatg atgaaaataa acaagcgtca
    28561 atacaaaatg aagacactaa tgacactcat gtagatgaaa gtccatacaa ttatgaggaa
    28621 gttagtttga atcaagtatc gacaacaaaa caattgtcag atgatgaagt tacggtttcg
    28681 aatgtaacgt ctcaacatca atcagcacta caacataacg ttgaagtaaa tgataaagat
    28741 gaactaaaaa atcaatccag attaattgct gattcagaag aagatggagc aacgaataaa
    28801 gaagaatatt caggaagtca aatcgatgat gcagaatttt atgaattaaa tgatacagaa
    28861 gcagatgagg atactacttc aaatatcgaa gataatacca atagaaacgc gtctgaaatg
    28921 catgtagacg ctcctaaaac gcaagagcac gcagtaactg aatctcaagt taataatatc
    28981 gataaaacgg ttgataatga aattgaatta gcaacgcgtc ataaaaaaga tgaccaaaca
    29041 aacttaagtg tcaactcatt gaaaacgaat gatgtgaatg atggtcatgt tgtggaagat
    29101 tcaagcatga atgaaataga aaagcataac gcagaaatta cagaaaatgt gcaaaacgaa
    29161 gcagctgaaa gtgaacaaaa tgtcgaagag aaaactattg aaaacgtaaa tccaaagaaa
    29221 cagactgaaa aggtttcaac tttaagtaaa agaccattta atgttgtcat gacgccatct
    29281 gataaaaagc gtatgatgga tcgtaaaaag cattcaaaag tcaatgtgtc tgaattaaag
    29341 cctgtacaaa gtaaacaagc tgtgagtgaa agcaagcctg cgagtcaagc cgcaccatca
    29401 tcaagctctg attcacaaga gtcaaacaca aatgcatata aaacaaataa tatgacatca
    29461 aacaatgttg agaacaatca acttattggt catgcagaaa cagaaaatga ttatcaaaat
    29521 gcacaacaat attcagagca gaaaccttct gctgattcaa ctcaaacgga aatatttgaa
    29581 gaaagccaag atgataatca attggaaaat gagcaagttg atcaatcaac ttcgtcttca
    29641 gtttcagaag taagcgacat aactgaagaa agcgaagaaa caacacatcc aaacaatact
    29701 agtggacaac aagataatga tgatcaacaa aaagatttac agccttcatt ttcaaatcaa
    29761 aatgaagata cagctaatga aaatagacct cggacgaacc aacaagatgt tgcaacaaat
    29821 caagctgtac aaacatctaa gccgatgatt cgtaaaggcc caaatattaa attgccaagt
    29881 gtttcattac tagaagaacc acaagttatt gagccggacg aggactggat tacagataaa
    29941 aagaaagaac tgaatgacgc attattttac tttaatgtac ctgcagaagt acaagatgta
    30001 actgaaggtc caagtgttac aagatttgaa ttatcagttg aaaaaggtgt taaagtttca
    30061 agaattacgg cattacaaga tgacattaaa atggcattgg cagcgaaaga tattcgtata
    30121 gaagcgccta ttccaggaac tagtcgtgtt ggtattgaag ttccgaacca aaatccaacg
    30181 acggtcaact tacgttctat tattgaatct ccaagtttta aaaatgctga atctaaatta
    30241 acagttgcga tggggtatag aattaataat gaaccattac ttatggatat tgctaaaacg
    30301 ccacacgcac taattgcagg tgcaactgga tcagggaaat cagtttgtat caatagtatt
    30361 ttgatgtctt tactatataa aaatcaccct gaggaattaa gattattact tatcgatcca
    30421 aaaatggttg aattagctcc ttataatggt ttgccacatt tagttgcacc ggtaattaca
    30481 gatgtcaaag cagctacaca gagtttaaaa tgggccgtag aagaaatgga acgacgttat
    30541 aagttatttg cacattacca tgtacgcaat ataacagcat ttaacaaaaa agcaccatat
    30601 gatgaaagaa tgccaaaaat tgtcattgta attgatgagt tggctgattt aatgatgatg
    30661 gctccgcaag aagttgagca gtctattgct agaattgctc aaaaagcgag agcatgtggt
    30721 attcatatgt tagtagctac gcaaagacca tctgtcaatg taattacagg tttaattaaa
    30781 gccaacatac caacaagaat tgcatttatg gtatcatcaa gtgtagattc gagaacaata
    30841 ttagacagtg gtggagcaga acgcttgtta ggatatggcg atatgttata tcttggtagc
    30901 ggtatgaata aaccgattag agttcaaggt acatttgttt ctgatgacga aattgatgat
    30961 gttgttgatt ttatcaaaca acaaagagaa ccggactatc tatttgaaga aaaagaattg
    31021 ttgaaaaaaa cacaaacaca atcacaagat gaattatttg atgatgtttg tgcatttatg
    31081 gttaatgaag gacatatttc aacatcatta atccaaagac atttccaaat tggctataat
    31141 agagcagcaa gaattatcga tcaattagag caactcggtt atgtttcgag tgctaatggt
    31201 tcaaaaccaa gggatgttta tgttacggaa gcagatttaa ataaagaata attatgagta
    31261 aggagtttta tataatgaca cactatcatt ttgtcggaat taaaggttct ggcatgagtt
    31321 cattagcaca aatcatgcat gatttaggac atgaagttca aggatcggat attgagaact
    31381 acgtatttac agaagttgct cttagaaata aggggataaa aatattacca tttgatgcta
    31441 ataacataaa agaagatatg gtagttatac aaggtaatgc attcgcgagt agccatgaag
    31501 aaatagtacg tgcacatcaa ttgaaaatag atgttgtaag ttataatgat tttttaggac
    31561 agattattga tcaatatact tcagtagctg taactggtgc acatggtaaa acttctacaa
    31621 caggtttatt atcacatgtt atgaatggtg ataaaaagac ttcattttta attggtgatg
    31681 gcacaggtat gggattgcct gaaagtgatt atttcgcttt tgaggcatgt gaatatagac
    31741 gtcacttttt aagttataaa cctgattacg caattatgac aaatattgat ttcgatcatc
    31801 ctgattattt taaagatatt aatgatgttt ttgatgcatt ccaagaaatg gcacataatg
    31861 ttaaaaaagg tattattgct tggggtgatg atgaacattt acgtaaaatt gaagcagatg
    31921 ttccaattta ttactatgga tttaaagatt cggatgacat ttatgctcaa aatattcaaa
    31981 ttacggataa aggtactgct tttgatgtgt atgtggatgg tgagttttat gatcacttcc
    32041 tgtctccaca atatggtgac catacagttt tgaatgcatt agctgtaatt gcgattagtt
    32101 atttagagaa gctagatgtt acaaatatta aagaagcatt agaaacgttt ggtggtgtta
    32161 aacgtcgttt caatgaaact acaattgcaa atcaagttat tgtagatgat tatgcacacc
    32221 atccaagaga aattagtgct acaattgaaa cggcacgaaa aaaatatcca cataaagaag
    32281 ttgttgcagt atttcaacca cacactttct ctagaacaca agcattttta aatgaatttg
    32341 cagaaagttt aagtaaagca gatcgtgtat tcttatgtga aatttttgga tcaattagag
    32401 aaaatactgg tgcattaacg atacaagatt taattgataa aattgaaggt gcatcgttaa
    32461 ttaatgaaga ttctattaat gtattagaac aatttgataa tgctgttatt ttatttatgg
    32521 gtgcaggtga tattcaaaaa ttacaaaatg catatttaga taaattaggc atgaaaaatg
    32581 cgttttaata tgtttataat agagtagtat gggtatttat tattaatgac attattacat
    32641 gttaattagg aggcgttttt aatggattgg attttaccaa ttgctggaat tatcgctgcg
    32701 attgcattct taattttatg tatcggtatc gtagctgtat taaattctgt taagaaaaac
    32761 ttagattatg ttgcaaaaac acttgacggt gtagaaggtc aagttcaagg tattactcgt
    32821 gaaacaacag atttacttca taaagtaaac cgtttaactg aggatatcca aggtaaagta
    32881 gatcgtttaa actcagttgt agatgctgtt aaaggtatcg gtgactcagt acaaacgtta
    32941 aacagctctg tagatcgtgt aacaaattca attacacata atatttctca aaatgaagat
    33001 aaaatctcac aagttgttca atggtcaaat gttgcaatgg aaattgcaga caaatggcaa
    33061 aatagacact accgtcgtgg aagtgcaaat tacaaagcta ataatgtagc aactgatgca
    33121 aatcatagct atacttctcg agtagataaa taattaataa ttaaacaaat gcacttaaat
    33181 gaggttgtta cttatttaag tgcatttgtt ataggaggat atacaaatga cgcagcaaca
    33241 aaataataaa agaacattaa aaaataaaca cacttatcat aatgaactac taccgaaccg
    33301 taaagatttt gttgttagtt ttataactgg cgcgcttgtt ggttcagctt taggcttgta
    33361 ttttaaaaat aaagtttatc aaaaagcaga tgatttaaaa gtcaaagaac aagaactgtc
    33421 gcaaaagttt gaagaaagaa aaacgcaact tgaagaaacg gttgccttta caaaagaacg
    33481 tgttgaagga tttttaaaca aatctaaaaa tgagcaagcg gcattaaaag cacaacaagc
    33541 agcaataaaa gaagaagcaa gtgcaaataa tttaagtgat acatcacaag aggcacaaga
    33601 gattcaagaa gctaaaaaag aagcacaagc agaaacggat aaaagtgcag aagtatcaaa
    33661 taaagaatca aaagcagtgg cattaaaagc acaacaagca gcaataaaag aagaagcaag
    33721 tgtaaataat ttaagtgata catcacaaga ggcacaagag attcaagaag ctaaaaaaga
    33781 agcacaagca gaaacagata aaagtgcagc tgtatcaaat gaagaatcaa aagcagtggc
    33841 attaaaagca caacaagcag caataaaaga agaagcaagt gcaaataatt tgagtgatac
    33901 atcacaagag gcacaagaaa ttcaagaagc taaaaaagaa gcacaagcag aaacagataa
    33961 aagtgaagct gtatcaaatg aagaatcaaa agcagtggca ttaaaggtat cgaaagaaga
    34021 gtcacaagct gaaagattag caaacgctgc aaaacagaag caagctaaat taacaccagg
    34081 ttcaaaagag agtcaattaa ctgaagcgtt atttgcagaa aaaccagttg ctaaaaatga
    34141 cttgaaagaa attcctcaat taattactaa aaagaatgat gtatcagaaa cagttaatac
    34201 agataataaa gacactgtaa aacaaaaaga agctaaattt gaaaatggtg ttattacacg
    34261 taaagctgat gaaaaaacaa ctaataatac agatgttgac aagaaatcag gtaaacaatc
    34321 taaaaaaaca acaccttcaa ataaacgaaa tgcatcaaaa gcatctacaa ataaaacttc
    34381 aggtcagaaa aagcaacata ataagaaatc atcacaaggt gctaagaaac aaagtagttc
    34441 aagtaagtca actcaaaaga ataatcaaac tagtaataag aattcaaaag caacaaatgc
    34501 taaatcatca aatgcatcaa aaaaatcaaa tgcaaaagtt gaaaaagcta aaagtaaaat
    34561 agagaagcgt acatttaatg actaagcata ctaaaatcgt ttaataatca ttcatagcag
    34621 taagctatgt attatattta taaaaattga atttcaaaat aaaaggtagg cattcaggtg
    34681 cttacctttt ttgatatcat cagtttattt tgaaaggcaa cgcgatcatt ccatgtattt
    34741 attttgtttg taacatcgtt agattacaat agtgatattg cacattttaa gctgaagatg
    34801 gaaaaatatt cgataatcaa ataaacaatg aatcttagta attacaatga cgttcactaa
    34861 ttcaaatata gctgaatatg ttggtgagtg atgttcacta tagatttata ttaatataca
    34921 aaggttgtta aattttatta agcgttaggt tgaatgtatg agaattttag atttataata
    34981 gaagatagaa accaaaattt ttcttaaaag cagtaatgtt gactcaaaat aagctataat
    35041 catgacactt atttaattga ttaacatgtg ctaataaata tcaatataga atataacttt
    35101 caaacaatga ctgagaaaat cgaaatgtca gtcaagcatc atatagttag aaaattaatt
    35161 attttctgtc aatttagggt tgaactatac atatgatatt gttagaatat tttttaacat
    35221 tatattttat tgctttaaag tggaatatac ttgaaataat tcgtagaggt gagtaaggat
    35281 gagtaataaa ttagaatcat acagaagtga gattgtctca ctgaatcatc aaattttaga
    35341 cttattatct aaacgtggtg aactagcaca aaaaattggg gaagaaaaat taaaacaagg
    35401 tacacgtatc tatgatccac aacgtgaaaa agaaatgctt aacgacttaa tcgatagtaa
    35461 caaaggacca ttcaacgata atactattaa gcaattattt aaagaaattt tcaaagcctc
    35521 tacagattta caaaaatctg aaaatgaaaa acatttatat gtatcacgta agttgaaacc
    35581 tgaagatacg attgtaacat ttgataatgg gggcattatt ggagacggca ataaatcatt
    35641 tgtatttggg ccatgttcag ttgaatcatt tgaacaagtt gaagctgttg ctaaaaactt
    35701 acatgctaaa ggtgaaaaat ttattcgtgg cggtgcattt aaaccacgta catcaccata
    35761 tgatttccaa ggtttaggtg ttgaaggtct taaaatactt aaacaaatta aagataaata
    35821 tgatttaaat gttgtcagtg aaatcgtaaa tccaaatgat tttgaagtgg ctgatgagta
    35881 tttagacgta ttccaaattg gtgcacgtaa tatgcaaaac ttcgagttat taaaagaagc
    35941 tggccgtacg aaaaagccta ttctattaaa acgtggttta tctgctacaa tcgaagagtt
    36001 tgtttatgca gctgaataca ttgcttcaca aggtaatcaa aacattattt tatgtgaacg
    36061 tggaatccga acttatgaaa aggctacacg taacacttta gatatttcag cagtaccaat
    36121 tttaaaacaa ggtacgcact taccagtcat ggtagatgtt acgcatagta caggtcgtaa
    36181 agatatcatg ttaccaactg cgaaagcagc attagcagta ggtgctgatg gcgttatggc
    36241 tgaggtgcat ccagatccat ctgttgcact tagtgatgcg ggtcaacaaa tggatttaga
    36301 tgaattccaa gcattttatg atgaattaaa gcctttgtct gatttatata acgctaaaaa
    36361 gttaaaataa tattccaagg aaactataga ctacttaact aatatgtcat gttgaagtag
    36421 aatattatct ttgaatcgac aattttaaac ttgtagccat tctaagagta tattactttt
    36481 agagtggcta ttattttttg tatagaaata aaggtgtact gcacttaacg attgttataa
    36541 tacttcaaca cttgttcaat ttcacaatta ttaaagatta tgactgattg cagtaattaa
    36601 aattataact atgaattatc tgtaaatata atagattcac acatttgtta ctgaaatgtg
    36661 aacatttttc aac
//
LOCUS       DAKPJH010000014        36497 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.014, whole genome shotgun sequence.
ACCESSION   DAKPJH010000014 DAKPJH010000000
VERSION     DAKPJH010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 36497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36497
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.014"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            269..715
                     /locus_tag="OY092_000572"
     CDS             269..715
                     /locus_tag="OY092_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1075545.1"
                     /translation="MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKDYDLTYTGYIVL
                     MAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQG
                     KAIKSPLAEISVKVFNEFNISEREASDIVNNLRNFVSKNFDNSDKK"
     gene            930..1358
                     /locus_tag="OY092_000573"
     CDS             930..1358
                     /locus_tag="OY092_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HCX1075546.1"
                     /translation="MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYE
                     TDELYYLEAELAGVNKEDISIDFNNNTLTIQATRNAKHKSEQLILDERNFESLMRQFD
                     FEAVDKQHITASFENGLLTITLPKIKPSNDTTSSTSIPIS"
     gene            complement(1466..2635)
                     /locus_tag="OY092_000574"
     CDS             complement(1466..2635)
                     /locus_tag="OY092_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NarK/NasA family nitrate transporter"
                     /protein_id="HCX1075547.1"
                     /translation="MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQ
                     ISIILAIPVILGSVLRVPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMAS
                     GFFLGVGGAIFSVGVTSVPKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQ
                     TTVRSYLIIIALFALIMFIFGDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGA
                     FVAFGIFLPNYLVNHFGIDKVDAGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDF
                     VIMIIGAVILGISDHIALFTVGCLTISICAGIGNGLIFKLVPSYFSNEAGSANGIVSM
                     MGGLGGFFPPLVITYVANLTGSSHLAFIFLAVFGCIALFTMRHLYQKEYGSLKHS"
     gene            3005..3919
                     /locus_tag="OY092_000575"
     CDS             3005..3919
                     /locus_tag="OY092_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000276756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2268 domain-containing protein"
                     /protein_id="HCX1075548.1"
                     /translation="MYKINIIRSDSVYKKILKAPLNERDSIFTKEILVPFKKKFEVQQ
                     IPIHNDDKQTMSAIQLLDVFHKSPEELVETDQMSIQYLNNDFWINCEKYLKVAIDQFA
                     NYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
                     IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNV
                     KIKNTIYNHLHLKHIFESMPYLYGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKS
                     NIPIEVATTLPAQKIINEVTEFWHTHTL"
     gene            3898..4638
                     /locus_tag="OY092_000576"
     CDS             3898..4638
                     /locus_tag="OY092_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCX1075549.1"
                     /translation="MAYTYTLKDIIEITGVTKRTLHYYDEIGLLVPDKNDKNYRVYKQ
                     QDLEKLQKILILKSFDFDIAKIKQYISYDNEQLRKLLSEQISKLDKKISDLQLIRRSV
                     CEFIKGHSLIDTSILNKTLQSQYDKEASIKYGHTKAYQSFIRRKDNLQSQDIRQKLST
                     IFNKFNHMSLSHYPIQDCNDIVTEWKSFMNTIADFDDETLCCIAKTYEDDTRFKDYFN
                     SYDNQNLASYISEAVNYFLSNVNKSDNF"
     gene            complement(4893..5546)
                     /gene="nreC"
                     /locus_tag="OY092_000577"
     CDS             complement(4893..5546)
                     /gene="nreC"
                     /locus_tag="OY092_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464689.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation response
                     regulator NreC"
                     /protein_id="HCX1075550.1"
                     /translation="MKIVIADDHAVVRTGFSMILNYQNDMEVVATAADGVEAYQKVME
                     YKPDVLLMDLSMPPGESGLIATSKIADSFPETKILILTMFDDEEYLFHVLRNGAKGYI
                     LKNAPDEQLLLAIRTVYKGETYVDMKLTTSLVNEFVSNSNQDTANTSDPFKILSKREL
                     EILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLGLKSKPELVEYALKKKLLEF"
     gene            complement(5569..6603)
                     /gene="nreB"
                     /locus_tag="OY092_000578"
     CDS             complement(5569..6603)
                     /gene="nreB"
                     /locus_tag="OY092_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501138.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation sensor histidine
                     kinase NreB"
                     /protein_id="HCX1075551.1"
                     /translation="MINEDSIQLEALLKKYYEHSIEKIVFADDSGKIIAMNDAAKDIL
                     SEEDNYSAVANAICHRCEGYTNAYDVQSCKDCFLESMQVQATNFQVFMKTKDQKVMPF
                     TATYQLIDQDRGIHAFTLQNVSSQIEQQEKLHQQRMMRKTISAQENERKRISRELHDS
                     VIQEMLNVDVQLRLLKYQEDTAKLLEDAENIEYIVAKLIDDIRNMSVELRPASLDDLG
                     LEAAFKSYFKQFEENYGIKIIYTSNIKNTRFDSDIETVVYRVVQEAILNALKYADVNE
                     INVGIRQTGRHLVAEVIDAGNGFDPSSKPKGSGLGLYGMNERAELVSGSVNIETKIGE
                     GTNVTLNIPI"
     gene            complement(6627..7079)
                     /gene="nreA"
                     /locus_tag="OY092_000579"
     CDS             complement(6627..7079)
                     /gene="nreA"
                     /locus_tag="OY092_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation accessory nitrate
                     sensor NreA"
                     /protein_id="HCX1075552.1"
                     /translation="MTPEAIIEDRRFQETLDKIRKEEGYDFAAIAFYESNKPSSPIKW
                     HYVSGNKNNRFKLIILRKGRGLAGTVMKTGKRMIIANVGLALGPEEKIDYPILLSESL
                     TAVLAVPLWYKNQVYGVLLFGQRDGRPLPKIFDNDDIQRKFGIFNDDK"
     gene            complement(7099..7776)
                     /gene="narI"
                     /locus_tag="OY092_000580"
     CDS             complement(7099..7776)
                     /gene="narI"
                     /locus_tag="OY092_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HCX1075553.1"
                     /translation="MLNQFLWVIFPYLCLVVFVAGHIARYRYDKFSWTAKSSELIERK
                     RLMWGSLLFHLGIIPVFFGHVVGLLIPKSWMDAAGVSEHLYHIGAVYIGSIFGIITLV
                     GMFLLTARRVTTKSIRRLSSASDIFVNFLLLLIVFMGCYATLVTNIQHPDFNYRTSLS
                     IWFRQLFMLKPDASLMSGVPIAFKIHILLGFTIMACWPFTRLVHVWSVPLTYINRRYI
                     IYRKNKV"
     gene            complement(7769..8344)
                     /gene="narJ"
                     /locus_tag="OY092_000581"
     CDS             complement(7769..8344)
                     /gene="narJ"
                     /locus_tag="OY092_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HCX1075554.1"
                     /translation="MINFDNFKKYQESFGYIAQQLCFPEKLTFHPKTFEETISKDHPG
                     YDDLIAFRNVMMTFSLSEIKAIYTDTFDFTKKAPLYMTYNKFDTQKERGQMLAKLKVL
                     YEMFGLEMVDNELSDYLPLMLQFLQVAEWRNDPRAEENIQLIIMIIEDGTYVMANALG
                     EDNNPYAYVIQALRKTLKLCLTSPKGVKHHA"
     gene            complement(8337..9896)
                     /gene="narH"
                     /locus_tag="OY092_000582"
     CDS             complement(8337..9896)
                     /gene="narH"
                     /locus_tag="OY092_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HCX1075555.1"
                     /translation="MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNV
                     ETKPGVGYPKRWEDQEHYKGGWVLNRKGKLELKSGSRISKIALGKIFYNPDMPLIKDY
                     YEPWNYNYEHLTTAKSGNHSPVARAYSEITGDNIEIEWGPNWEDDLAGGHVTGPKDPN
                     IQKIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQDACR
                     GWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYD
                     ADRVHEAASAVDEKDLYEKQLDIFLNPFDEEVIAQAEKDGISYDWIEAAQNSPIYKLA
                     IEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNTNQNPDAIFPAIEEMRLPIEYL
                     ANIFTAGDTKPVKEALQRMAMMRSYMRSQVTQQPFDTSRLERLGLTERQTKDMYRLLG
                     LAKYEDRFVIPTSHKETYLDTYHAQGSTGYNYGGEHFGDNCEGCGVAVGSGKTGQEIY
                     NENFYGGIFRD"
     gene            complement(9886..13575)
                     /locus_tag="OY092_000583"
     CDS             complement(9886..13575)
                     /locus_tag="OY092_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCX1075556.1"
                     /translation="MGKFGLNFFKPTEKFNGNWSILESKSREWEKMYRERWSHDKEVR
                     TTHGVNCTGSCSWKVFVKNGVITWENQQTDYPSCGPDMPEYEPRGCPRGASFSWYEYS
                     PLRIKYPYIRGKLWDLWTEALEENNGNRVAAWASIVENEDKAKQYKQARGMGGHVRSN
                     WKDVTDIIAAQLLYTIKKYGPDRIAGFTPIPAMSMISYAAGARFINLLGGEMLSFYDW
                     YADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGTKV
                     ISVAPDYAENVKFADNWLAPNPGSDAAIAQAMTHVILQEHYVNQPNERFINYAKQYTD
                     MPFIIMLDEDENGYKAGRFLRASDLGQTTEQSEWKPVIHDTISDSLVVPNGTMGQRWE
                     EGKKWNLKLETEDGSKINPTLSMTEGGYELETIQFPYFDSDGDGIFNRPIPTRQVTLA
                     NGDKVRIATIFDLMASQYGVRRFDHKLESKGYDDAESKYTPAWQEGISGVKQSVVIQV
                     AKEFAQNAIDTEGRSMIIMGAGINHWFNSDTIYRSILNLVMLCGCQGVNGGGWAHYVG
                     QEKCRPIEGWSTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDRLKSPLAKTEE
                     LKHQHPADYNVLAARLGWLPSYPQFNKNSLLFAEEAKDEGIDSNEAILQRAIDEMKSK
                     QTQFAIEDPDLKKNHPKSLFIWRSNLISSSAKGQEYFMKHLLGTKSGLLATPNEDEKP
                     EEITWREETTGKLDLVVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPYVHPFN
                     PAIDPLWESRSDWDIYKTLAKAFSEMAKDYLPGTFKDVVTTPLSHDTKQEISTPYGVV
                     KDWSKGEIEAVPGRTMPNFAIVERDYTKIYDKYVTLGPVLEKGKVGAHGVSFGVSEQY
                     EELKSMLGTWSDTNEDSVRTNRPRIDTARNVADAILNISSATNGKLSQKSYEDLEQQT
                     GMPLKDISSERAAEKISFLNITSQPREVIPTAVFPGSNKQGRRYSPFTTNVERLVPFR
                     TLTGRQSYYVDHEVFQQFGESLPVYKPTLPPMVFGDRDKKIKGGTDALVLRYLTPHGK
                     WNIHSMYQDNKHMLTLFRGGPTVWISNEDAEKHDIQDNDWLEVYNRNGVVTARAVISH
                     RMPKGTMFMYHAQDKHIQTPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNY
                     YGPIGNQRDLYVAVRKMKEVNWLED"
     gene            complement(13879..14856)
                     /gene="cobA"
                     /locus_tag="OY092_000584"
     CDS             complement(13879..14856)
                     /gene="cobA"
                     /locus_tag="OY092_000584"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCX1075557.1"
                     /translation="MSVDEYGKVYLIGAGPGNPNYLTKKAERLIREAEVILYDRLVNP
                     LILQYANLTTEIIDVGKKPYAKHIQQEKINDCIVEAARRYNKVVRLKGGDPAIFGRVQ
                     EEVDTLNNFNIAFEIVPGVTSASAAVATLQTGLTMRTVAKSVTFSTGHFKDSEENEVD
                     VNSLVNGGTLAIYMGVKRLGKIITQIQQYTDIDYPIAIVFQASCFNEFVVKGHLSNII
                     SKLQHYSIEAKPGICIIGEVVGYTENTPKSYDPTKQFYVVSGAKHDALILCEHLYDEG
                     YGCLLNPNDSSNGTYHSSQYDYYDAFIKQQENVTYISTDRADAKTVLCH"
     gene            complement(14847..15161)
                     /gene="nirD"
                     /locus_tag="OY092_000585"
     CDS             complement(14847..15161)
                     /gene="nirD"
                     /locus_tag="OY092_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HCX1075558.1"
                     /translation="METKEKIKVTTLDELTPLIGKKVIVKGKEIGLFLTESGTIHAIH
                     NICPHKQGPLSEGTVSGEYVFCPLHDQKIDLNTGIVQEPDEGCVDVYEVEVTDGNVYI
                     CL"
     gene            complement(15165..17570)
                     /locus_tag="OY092_000586"
     CDS             complement(15165..17570)
                     /locus_tag="OY092_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075559.1"
                     /translation="MAKQKLVMIGNGMAGIRTIEEILERANDLYDITVIGKEPYPNYN
                     RIMLSNILQNKMTVEETIMNPYEWYEEHGIELITNDPVIEVDRANQNVTTANGIEVAY
                     DKLIFATGSKAFVIPVPGSTLPSVIGWRTIDDTEKMMDIAKTKKKAIVIGGGLLGLEC
                     ARGLLDQGMEVTVLHLAEWLMEMQLDRKAGNMLKADLEKQGMKFEMQANTTEILGEDD
                     VEGVKLADGREIPADLVVMAVGIRPYTEVAKESGLDVNRGIVVNDVMQTSDSNVYAVG
                     ECAEHNGKVYGLVAPLYEQGKVLADHLTNKETDGYKGSTTFTSLKVSGCELYSAGQIV
                     ENAEIKGIEIFNSVDNNYKKVFLKDGNVVGAVLYGDIDDGSRFYNMMKKGESTEDYTL
                     VSLLTKGGEEASLSIADMADDETICGCNGVDKGTIVNAITENGFTTVEEVTAKTKAGN
                     SCGKCKPQIAQILQHTLGDDFVAAKPAGICGCTDLTRDQIVTQIRAKGLKTSKEVRHV
                     LNFKNKGGCPKCRPAINYYLNMVYPHDHEDERESRFANERYHANIQNDGTFSVIPQMR
                     GGVTDADQLIRLGEVAKKYHVPLVKVTGSQRVGLYGVKKEELPNIWEDLGMRSASAYG
                     KKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGV
                     KDFGIISVENGFQIYIGGNGGTEVEKAEFLTTVETEDEVIKLCGALMQYYRETGIYAE
                     RTAPWLRRLGFENVKEVLLDPERQNELFERIMDAKKAVEAEPWEAITSNAQARKIFEV
                     EKV"
     gene            complement(17635..18366)
                     /locus_tag="OY092_000587"
     CDS             complement(17635..18366)
                     /locus_tag="OY092_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HCX1075560.1"
                     /translation="MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEH
                     QDLETVMTTLIKSGVKKLKIVPLLLFSAMHYLKDIPNIVHEMTQRYPDITVEVSEPLG
                     THPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGKFTKAHEELQTCVQHLQINKPT
                     YARTLYGEISFIHDLEDIARQYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHITP
                     SINFDPILKQIIKDRLESLMIPMKI"
     gene            complement(18599..19135)
                     /locus_tag="OY092_000588"
     CDS             complement(18599..19135)
                     /locus_tag="OY092_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075561.1"
                     /translation="MTKTMIRLASEQDAEKLQQLMHEAFTPLRELGIDWPSVNANLDA
                     VKENIDKNTTFVMTIDDEIISTITVRYPWGSVKSISGYPFVWWFATNPEYEGKGYGSQ
                     LLTYVEETFLRDTLKSAAVTLGTSARLHPWLLKIYEKRGYEIYSEHENDDGDLGVIMR
                     KVLIPERFEETILGQPPF"
     gene            complement(19369..20193)
                     /locus_tag="OY092_000589"
     CDS             complement(19369..20193)
                     /locus_tag="OY092_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCX1075562.1"
                     /translation="MIKNNKTVEDTYSTKAIVDSISSSVQMKQVMVQQTPGRYMLKSM
                     MAGFLLSIVTVFMFGIKTQFASTHVDGLINLMGAIAFSLGLVLVVLTNSELLTSNFMY
                     FTVGWYYKVVSLNKMMWILLYCFLGNILGGFVLFFLMKYAHVMTPEMTQALTALVQKK
                     TVDSTWLNIFTKGIFCNFFINIGIFISMQFKGGLTKAFFIACGVIVFVYMGYEHVVFN
                     AGLYAGMVFFNLDAVSWLHVLKNIAFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ"
     gene            complement(20396..20578)
                     /locus_tag="OY092_000590"
     CDS             complement(20396..20578)
                     /locus_tag="OY092_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075563.1"
                     /translation="MVQRYIKVLILYIFTTLLSSITVTSKCVPNKVVRFILRTVVGYG
                     IFAYGLHYFSNLKKNK"
     gene            complement(20665..21132)
                     /locus_tag="OY092_000591"
     CDS             complement(20665..21132)
                     /locus_tag="OY092_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HCX1075564.1"
                     /translation="MTIKVEDNKIIFSRTIEAPIEKVFDAYTTKALFEKWFHPKDAST
                     KVFRFNAVSGGDAFYAIKTPTMTSYTLAEYKTVKRPYLIEYIDSFATPQGAKDTKMPS
                     MKITLSFSKSNTTKTTVTSTSVFPTKEAAQQVVNMGVEQGMNQTLDQLDALLK"
     gene            complement(21318..22868)
                     /gene="adcA"
                     /locus_tag="OY092_000592"
     CDS             complement(21318..22868)
                     /gene="adcA"
                     /locus_tag="OY092_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding
                     lipoprotein AdcA"
                     /protein_id="HCX1075565.1"
                     /translation="MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQS
                     FAEQIGGKHVKVSSIYPAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVAST
                     IKDKDKKLSLEDKLDKAKLLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPK
                     INQTFAKEIKDELVKKDLKHKDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISH
                     ESIGYLADRYGFVQKGIQNMNAEDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTET
                     IRKETDAKPLKFYNMESLNKEQQKKDNITYQSLMKSNIENIGKALDSGVKVKDDKAES
                     KHDKAISDGYFKDEQVKDRELSDYAGEWQSVYPYLKDGTLDEVMEHKAENDPKKSAKD
                     LKAYYDKGYKTDITNIDIKGNEITFTKDGKKHTGKYEYNGKKTLKYPKGNRGVRFMFK
                     LVDGNDKDLPKFIQFSDHNIAPKKAEHFHIFMGNDNDALLKEMDNWPTYYPSKLNKDQ
                     IKEEMLAH"
     gene            complement(23162..23428)
                     /locus_tag="OY092_000593"
     CDS             complement(23162..23428)
                     /locus_tag="OY092_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HCX1075566.1"
                     /translation="MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALE
                     GIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDKHIKIASCKYHY"
     gene            complement(23428..23679)
                     /locus_tag="OY092_000594"
     CDS             complement(23428..23679)
                     /locus_tag="OY092_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HCX1075567.1"
                     /translation="MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESD
                     YNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV"
     gene            complement(23842..23943)
                     /locus_tag="OY092_000595"
                     /pseudo
     CDS             complement(23842..23943)
                     /locus_tag="OY092_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501155.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(23950..24549)
                     /locus_tag="OY092_000596"
     CDS             complement(23950..24549)
                     /locus_tag="OY092_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HCX1075568.1"
                     /translation="MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKC
                     PYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLD
                     FQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDK
                     KIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK"
     gene            complement(24568..24930)
                     /locus_tag="OY092_000597"
     CDS             complement(24568..24930)
                     /locus_tag="OY092_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000819849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HCX1075569.1"
                     /translation="MKRFVATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKK
                     GNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDS
                     RRYYQQHDADYHEENMTN"
     gene            25185..26435
                     /gene="fmhA"
                     /locus_tag="OY092_000598"
     CDS             25185..26435
                     /gene="fmhA"
                     /locus_tag="OY092_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhA"
                     /protein_id="HCX1075570.1"
                     /translation="MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHRVDLKGDVHLVGV
                     KDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKQNCL
                     YVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDKLGYKHQGFPVGYDSMSQIRWLSVL
                     DLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKF
                     RELPYFEEMQKLYGDHAMLKLAYIDLNDYLKTLQLKQQQLAAELSGVEEALEESPNSK
                     KNKTKRTQLEQQLSSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPK
                     YNAYMGAYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEY
                     IGDFIKPIKPMLYKLQTYLKHKRR"
     gene            complement(26520..27251)
                     /locus_tag="OY092_000599"
     CDS             complement(26520..27251)
                     /locus_tag="OY092_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HCX1075571.1"
                     /translation="MIQLNNIHKSFNDVEVIKGIDLSVDKGEVVTLIGRSGSGKTTLL
                     RMINALEIPTEGTVFVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEG
                     LITVKKLKKAEAREKSLELLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVML
                     FDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAREVSNNIVFIHEGVIGEQ
                     GAPEEIFNNPKTEELKRFLNVINEE"
     gene            complement(27248..27967)
                     /locus_tag="OY092_000600"
     CDS             complement(27248..27967)
                     /locus_tag="OY092_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCX1075572.1"
                     /translation="MFLNLNSEQLHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLI
                     IALFTALMRISTSKVLRSIARVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQW
                     TLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYRQTIQRIILPQA
                     IRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVV
                     CFIISIIQGIYESYIERGYRS"
     gene            complement(27948..28727)
                     /locus_tag="OY092_000601"
     CDS             complement(27948..28727)
                     /locus_tag="OY092_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HCX1075573.1"
                     /translation="MKRLLFVVIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYA
                     PFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGI
                     NPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
                     DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSKSAFAF
                     SKKVDDETVQKFNDGLKKIEENGELAKIGKKWFGQDVSKSK"
     gene            complement(28848..30287)
                     /gene="mdeA"
                     /locus_tag="OY092_000602"
     CDS             complement(28848..30287)
                     /gene="mdeA"
                     /locus_tag="OY092_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdeA"
                     /protein_id="HCX1075574.1"
                     /translation="MSKKQKLTMIITMLMGGFFGLLNETLLVTALPSIMKDFEISYTQ
                     VQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFLVGISIFFLGTLLGGLSPHFATLLVA
                     RIIQALGAGIMMPLMMTTILDIFQPHERGKYMGIFGLVIGLAPAIGPTLSGYLVEYFN
                     WRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDFISVIFSVLGFGGLLYGTSSISE
                     KGFDNPIVLVSMIGGVVLVALFVLRQYRLSTPLLNFAVFKNKQFTVGIIIMGVTMVSM
                     IGSETILPIFVQNLLHRSALDSGLTLLPGAIVMAFMSMTSGALYEKFGPRKLALVGMA
                     IVIITTGYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMTHTMNQLKPEMNAHGSSM
                     TNTVQQIAGSIGTAALITILSHASKNFSPTMSDYNGMNKIEMMNQIKVDTMLHGYHAG
                     FLFALLITVISFFCSFMLQGKKKEVDSHQ"
     gene            30461..30565
                     /locus_tag="OY092_000603"
     CDS             30461..30565
                     /locus_tag="OY092_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal homeostasis protein"
                     /protein_id="HCX1075575.1"
                     /translation="MKLDLQTARRNLNSPNIKTRKRALKIIKQHKRAK"
     gene            complement(30719..31405)
                     /locus_tag="OY092_000604"
     CDS             complement(30719..31405)
                     /locus_tag="OY092_000604"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HCX1075576.1"
                     /translation="MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVR
                     ENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDAR
                     KEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI
                     PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTD
                     DLEVIDKYYL"
     gene            complement(31732..32598)
                     /locus_tag="OY092_000605"
     CDS             complement(31732..32598)
                     /locus_tag="OY092_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HCX1075577.1"
                     /translation="MSHNENLKLAQRGAYLSLIVYIILSIVKYVTGFVFNSAAVRADA
                     LNNMTDIIVSLAVIIGLKISIKPADRNHPYGHLKSENISSLLVSFVIMFVGIQVVIQN
                     APRLFKEDDVVPNAITIIVSLISGLVMLIVFAVNQRLAKRTKSSSLNSAAKDNLSDSL
                     VSIGTAIGLIFTQIGFPIVDIILATLLGLLIVYTGFGIFKEAIFMLSDGFNETELEAY
                     RNDILEVDEVQEVKSIKGRYHGSSVFIDVTIVVDANLSLVAAHQICDNVEHHLHKKGI
                     SSVYVHPEPDHL"
     gene            complement(33097..33201)
                     /locus_tag="OY092_000606"
     CDS             complement(33097..33201)
                     /locus_tag="OY092_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075578.1"
                     /translation="MLTNRLTSVNYVKKRLIQNIQRILSKEVLYGEMQ"
     gene            33296..34606
                     /locus_tag="OY092_000607"
     CDS             33296..34606
                     /locus_tag="OY092_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B domain-containing protein"
                     /protein_id="HCX1075579.1"
                     /translation="MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQ
                     NNYVTDQQKAFYQVLHLKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVA
                     QQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA
                     IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAI
                     TKLQKNDSIENRRLAQREVNKAPMDVQKHLQKQLDALVAQKDAEKKVAPKVEAPQIQS
                     PQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEK
                     YDTAKYYTDKYFKYKGTIDKTVLSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVT
                     ETLNTGKVLYAFYQNPKVVKAAITTAETATSIKNIFSSFTSFFK"
     gene            35097..36026
                     /gene="hlgA"
                     /locus_tag="OY092_000608"
     CDS             35097..36026
                     /gene="hlgA"
                     /locus_tag="OY092_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB subunit A"
                     /protein_id="HCX1075580.1"
                     /translation="MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIK
                     RTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMI
                     WPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNY
                     SKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARD
                     YFVPDNQLPPLIQSGFNPSFITTLSHEKGKGDKSEFEITYGRNMDATYAYVTRHRLAV
                     DRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK"
BASE COUNT        11994 a         6922 c         5141 g        12440 t
ORIGIN      
        1 ctttgaaaaa atttaataac aaatttcatt ttactatcta tcaaaataat tgactacttt
       61 taacaattaa gaatgataca attccatttt tttcaattta aaaaatcagt catatcagtc
      121 attaccgatg aaaatactaa gatattgata tgttttgcat tatttaacat ttaaattcaa
      181 ttatagacaa ttcgataatt gcgatgaaat cagtacttga caactattac acttcataat
      241 attgtttatt ttaacaagga gtgattggat gtatgtagaa aacagctatc ttagcaaaca
      301 gttgtgtttt ttattttatg tttcttcaaa agaaataatt aaaaaataca caaactatct
      361 taaggattat gatttaacct atactggtta cattgtttta atggcgattg aaaatgatga
      421 aaaacttaac atcaaaaaat taggtgaacg tgtattctta gattctggaa cactgacacc
      481 attactaaag aaattagaaa agaaagatta cgttgttcga acacgtgaag agaaagatga
      541 aagaaaccta caaatttctc taacagagca aggtaaagca ataaaaagtc ctcttgctga
      601 aatttctgtt aaagtattta atgaattcaa catttcagaa cgagaagcat cagacattgt
      661 taataatttg cggaattttg tttcgaaaaa tttcgacaat tccgacaaaa agtaactccc
      721 tatcataagg tgatgggcag aagtatgcat cgctatgttt attcattatc tttattgctt
      781 gtataaatct cgatgctcag ctcttttgcc ctgattcctt atcaggcaca aatctaccca
      841 tttataactt tttatctccc cttttacttt atctttttta atactactca tataatggct
      901 ttgtaataca aatttatata atggaagtga tgatattgaa cttcaatcaa ttcgagaatc
      961 aaaacttttt taacggtaat ccaagtgata catttaaaga tttaggtaaa caagtattta
     1021 attacttttc aacaccttca tttgtaacga atatatatga aacagacgaa ttatattact
     1081 tagaagctga actagcaggt gtaaataaag aagatattag tatcgatttc aataataata
     1141 cgctcactat tcaagctact agaaacgcaa aacacaaatc tgaacaactc attttagatg
     1201 agcgtaactt cgaatcatta atgcgtcaat ttgattttga agctgttgat aagcaacata
     1261 ttactgctag ttttgaaaat gggctattaa ctattaccct gcctaaaatc aaaccaagca
     1321 atgacactac ttcatcaaca tctattccaa tttcatagtt aaatttaaaa tgaatacact
     1381 actaaagcct taatatcatg ctacgaatat tgcgcatgat attaaggctt tgtcatttaa
     1441 atttaagaat gcttcgtatt acatatcaac tgtgtttcaa tgaaccatat tctttttgat
     1501 ataaatggcg cattgtaaat aatgcaatgc agccgaatac cgctaagaaa ataaatgcta
     1561 aatggcttga acctgttaaa ttagctacgt atgtgatgac caacggtggg aagaatcctc
     1621 ctaaaccacc catcattgat acgataccat ttgctgatcc tgcttcattt gagaagtatg
     1681 atggtactaa tttaaaaatt aagccgttac caatacctgc acaaatactt attgttaaac
     1741 agcctacagt gaataatgcg atatggtctg aaatacctaa aataacggca ccgataatca
     1801 taataacaaa atcaatcatc agtactttaa ctgcattaaa tttatcacct agtataccac
     1861 ctattggtct caagaatgtt gccagcgcaa tgaatacacc tgaacgaata ccagcatcta
     1921 ctttgtcaat tccaaaatga tttactaagt agttaggtaa gaaaatacca aatgcaacaa
     1981 aagcaccaaa agtaatgaaa taccaataac ttaagtaata taatttgtag tttttagata
     2041 atgttttcat ttgagccatt aatggcactt taattttacg ttcttgtgtg tcaccaaaaa
     2101 tgaacataat taatgcaaat aaagcgataa taattaagta acttctaact gttgtttgcc
     2161 aaccaataat acccgctatc ggtggtgcta aaaatgaaga aactgctgta ccgatattcc
     2221 ccataccata aataccattt gctagaccta ctttttcttt agggaaatat ttaggaactg
     2281 atgtaacacc aacagagaaa attgcgccac ctacgccaag gaaaaatcct gatgccatta
     2341 acatccccgg cgtttgtgct tggctcaaga aaaatatcgg gaataacaat acgataaaac
     2401 ttgtaaagaa tacccattta gcaccaacaa tatttgttaa ataaccaaat ggcacacgga
     2461 gcactgatcc caaaataact ggtatcgcta aaatgattga tatttgacct tcagttacat
     2521 tgacatcctg tttaataaaa ggcattaaag gagcaataat actccaagcc ataaatccaa
     2581 ccactaaact taatgtttgt aatgtaagtt gaaagccacc ttttgttttg tacatacgtt
     2641 tcaccttcac caaaatcatt tattttttaa tagatatcaa tactctgcct atatgttaga
     2701 ggtcaatgtt atttaaaaat gctttcattt atatgaaaac attcaatata gacaaagtat
     2761 tgactacata tatattttat tatgattgtg aaaaagtgaa cataaggatt ttcccttatt
     2821 tatggtgtga tttcccctat acaatgtccc tttacgatgc atttagacac tattttgtca
     2881 tcattttaat catattatta aggaacgctc acatactttt cttaattttt ttcaattagt
     2941 tacaattact gcttgaaaat cacgttacgt taccctttat gctgacagcg taaggaggtt
     3001 tatcatgtat aaaatcaata ttattagatc agattccgtc tataagaaaa tactcaaggc
     3061 accattaaac gaacgtgatt caattttcac taaagaaata ttagtacctt ttaaaaagaa
     3121 atttgaggtg cagcagattc ctattcataa tgatgacaag cagacaatga gtgcgattca
     3181 acttttagat gtatttcata agtctcccga agaactggtt gaaactgacc aaatgtcaat
     3241 acaatacctg aataatgatt tctggattaa ttgtgaaaaa tatttaaaag ttgctataga
     3301 tcaatttgca aattatagta tctcatctca agtttctaac tatcatttca cagtattact
     3361 tggagatagc caaaaaccac ttatgtatct aaataaaaat cgtggtggtg atggtggcat
     3421 accaggttat attatgattt atttagtgcc gagtacaagt acaattaatt ctatgaaaag
     3481 cttaattgca catgaagtaa atcataatat gcgctatcaa tatattgatt gggatggcgg
     3541 aagtttgatt gaattgatta ttgcagaagg attagctgaa aactatgtag aatcattgta
     3601 tggtaaagcg catattggac cgtgggtaac aaatactaat tggagtcgtg ataacgtaaa
     3661 aattaaaaat actatttata atcatttaca tttaaagcat atatttgaat cgatgcctta
     3721 tctctatggt gatgatatta ataaacttca aggtaggcct atcgttggct tatctcatgc
     3781 tgccggttat gcatgtggct atcacttggt gaaatacttt ttacaaaaat caaacatacc
     3841 tattgaagtt gccacaacac ttccagcaca aaaaataata aatgaggtga ctgaattttg
     3901 gcatacacat acactttaaa agatattatt gaaattacag gtgtaactaa aagaacttta
     3961 cattattacg atgaaatagg attattagtt ccagataaaa atgataaaaa ttatcgcgtt
     4021 tataaacagc aagacttaga aaaattacaa aagattttaa tactcaagtc ttttgatttt
     4081 gatatcgcta aaataaaaca atacatttca tatgataatg aacaattgcg aaagttatta
     4141 tcagagcaaa taagcaagtt agataaaaag atttctgact tacaattaat tagacgctct
     4201 gtatgtgaat ttattaaagg acattctcta atagatacca gcattttaaa caagacacta
     4261 cagtcacaat atgataaaga agcatctata aaatatggtc atacgaaagc atatcaatca
     4321 tttattagac gtaaagataa cttacaatca caggatatca gacagaaatt gtcaacaatc
     4381 ttcaataaat ttaatcatat gtctttgagt cattatccaa tccaagactg taatgatatc
     4441 gtgacagaat ggaaatcttt tatgaatact atcgctgatt ttgatgatga aacattatgc
     4501 tgtattgcta aaacatatga agatgatacg cgtttcaaag attactttaa ttcatatgat
     4561 aatcaaaatt tagcatcata catttcagaa gctgttaatt attttttgag caatgtgaat
     4621 aagagcgaca atttttaatc ctcatacaga tgctacaaca ctgaatacac caactaaaat
     4681 aattgttcaa agtagaaaac taatcattta ttctctaaat caataactat attaaaagtt
     4741 gtacctttgc aaagcgaatt agtataggtt atcgaaagga gaaaggatta ggttccattc
     4801 gatttataaa aaaaaatata tttcgaaaca tacaaaagcg ccagaagatt ccccgtttcc
     4861 tctggcgctt tgtatggtat tattttcaaa cattaaaact ctaataattt ctttttcaat
     4921 gcatattcaa cgagctctgg tttacttttc aagccaagct ttgtcataat atgcgtctta
     4981 tgtgcctcta ctgtctttac agaaacaaat aatttctctg caatttcttt attcccgtaa
     5041 cctttggcaa taagtggtaa tatttctagt tctcgttttg ataatatttt aaaaggatct
     5101 gatgtgtttg cagtgtcctg atttgaatta gatacaaatt cattcactaa agatgttgta
     5161 agtttcatat ctacatatgt ttcaccttta tatacagttc gaatagctaa caataattgt
     5221 tcatcaggtg catttttcaa tatgtaacct ttcgcaccat tacgcaacac atggaacaaa
     5281 tactcctcat catcaaacat tgttaatatt agtattttag tttcaggaaa actgtcagca
     5341 attttactcg tagcgataag acctgactca cctggtggca tacttaaatc cattagtaac
     5401 acatcaggtt tatattccat tactttttgg taagcttcga cgccatctgc agccgttgca
     5461 acaacttcca tatcattttg ataatttaaa atcatagaga accccgtacg gacaacagcg
     5521 tgatcatcgg caatgactat tttcaatttt attcccccaa tgtatgtttc aaattggaat
     5581 gttcaatgta acattggtac cctcaccaat tttcgtttcg atgttgacgc taccactgac
     5641 taattcagct cgctcattca ttccatataa accgagtcca gaacctttag gcttagaact
     5701 tggatcaaaa ccatttcccg catctatcac ttcagcaacc aaatgtcgcc cagtttgacg
     5761 gatacctaca tttatttcat ttacatcagc gtatttcaac gcatttagaa tagcttcttg
     5821 cactactcga taaacaaccg tttcaatatc actatcaaag cgggtatttt taatatttga
     5881 tgtatatatg atttttattc cataattttc ttcaaactgt ttaaaatatg atttaaaagc
     5941 tgcctcaagg cctagatcat ccaaagaagc gggtcttaat tcaaccgaca tattacgtat
     6001 atcatcaatt aatttagcga caatatattc aatattttct gcgtcttcca aaagctttgc
     6061 tgtatcttct tgatatttca acaatcgcaa ttgaacatct acatttaaca tttcttgaat
     6121 cacactatca tgtaattccc tagaaattcg ttttcgctca ttttcttgtg cggaaatcgt
     6181 tttacgcatc atacgttgtt gatgcaattt ttcttgttgt tcaatctgtg atgagacatt
     6241 ttgaagcgta aatgcatgaa tccctctatc ctgatcaata agctgataag ttgcagtaaa
     6301 cggcatcact ttttgatctt tcgtcttcat aaacacttga aaattcgtag cttgtacttg
     6361 catggactct aagaaacaat ctttacatga ttgtacatca taggcatttg tatacccttc
     6421 acatctgtga caaatcgcat tcgccacagc actgtaatta tcttcttcag ataatatatc
     6481 tttagcagca tcattcattg caataatttt accactatcg tcggcaaata ctattttttc
     6541 gattgaatgt tcatagtatt tttttaataa agcttctaat tgtatactgt cctcattaat
     6601 catgacctac accctaattc atctcattat ttatcatcat tgaaaatacc aaacttacgt
     6661 tgaatatcat cgttatcaaa tatttttggt aaaggacgtc catctctttg accaaataat
     6721 agtacgccat acacttgatt cttataccaa agcggcactg ctaaaactgc tgttaatgat
     6781 tcgcttaata aaattggata gtcaatcttt tcttctggtc ccaatgctaa accgacatta
     6841 gctataatca tacgcttccc tgttttcata acagttccag ctaatccacg gccttttctt
     6901 aaaataatta atttaaaccg attattttta ttacctgaaa catagtgcca ttttattgga
     6961 gatgatggtt tgttagattc atagaaagcg attgccgcaa aatcataacc ttcttctttg
     7021 cgtattttat ctaatgtctc ttgaaatcta cgatcttcaa taattgcttc tggtgtcaaa
     7081 tcctttcacc tcttatactt acactttatt cttacggtaa ataatatatc tgcgatttat
     7141 atatgtcaaa ggtacactcc aaacatgtac taaacgtgtg aatggccaac aagccataat
     7201 agtgaaacct aataatatat gaattttaaa tgcaattggt acaccactca ttaatgatgc
     7261 atctggtttc aacataaata attgtctaaa ccaaattgat aatgaagttc tatagttaaa
     7321 atctggatgc tgtatatttg ttactaatgt tgcataacat cccataaata caataagtaa
     7381 taataagaag ttaacaaaga tatcggacgc tgaacttaat ctgcgaatac ttttcgtagt
     7441 aacacgtctc gctgttaata aaaacatccc taccaatgta attataccaa agatactccc
     7501 tatataaaca gcaccaatat gatataaatg ctcagacaca ccggcagcat ccatccacga
     7561 cttaggtatt aataatccta caacatgtcc aaaaaatacc ggaataatac ctaagtgaaa
     7621 taataaacta ccccacatca atctttttct ttcaattaat tcactagatt ttgctgtcca
     7681 cgaaaattta tcataacgat aacgtgcaat atgacctgcg acaaagacaa ctaaacataa
     7741 atacggaaat ataacccata aaaactgatt aagcatgatg tttcactcct tttggtgatg
     7801 tcaaacataa tttcaatgtt tttctaagcg cttgaatcac ataggcatat ggattgttat
     7861 cttcaccaag tgcattcgcc atcacatatg ttccatcctc aataatcata atgattaatt
     7921 gaatattctc ttcagctctt ggatcatttc tccattctgc cacttgtaaa aattgcaaca
     7981 tcaacggtag ataatcagaa agttcattgt ctaccatttc tagtccaaac atctcgtaca
     8041 atacctttag tttcgctaac atttgcccac gttctttttg tgtatcaaac ttgttatacg
     8101 tcatatataa tggtgctttt ttcgtaaaat caaatgtatc tgtataaatc gctttgattt
     8161 ctgataaaga aaatgtcatc attacatttc taaatgctat taaatcgtca tagcctggat
     8221 gatctttcga aattgtttct tcaaaagtct ttggatgaaa tgttaatttt tccggaaagc
     8281 atagctgttg cgctatatat ccaaaacttt cttgatactt tttaaaatta tcgaaattaa
     8341 tcacggaaaa tccctccata gaaattctca ttataaattt cttgaccagt ttttcctgaa
     8401 cctactgcaa caccacaacc ttcacagtta tcaccaaagt gttcgccacc atagttatat
     8461 cccgtactac cttgagcatg atacgtatct aaatatgttt ccttatgtga cgttggaata
     8521 acgaatcgat cttcatattt agctagtcct aataagcgat acatatcttt agtttgtcgt
     8581 tcagttaaac ctaatcgctc taaacgtgat gtatcaaatg gttgttgtgt aacttgggaa
     8641 cgcatgtaac ttctcatcat tgccatacgc tgcaatgctt cttttactgg ttttgtatct
     8701 cctgccgtga aaatattcgc taaatattca atcggcaagc gcatttcttc aatggctggg
     8761 aaaatcgcat ccggattttg atttgtattt ttaccttcga aatagctcat aattgggcta
     8821 agtggtgggc aataccaaac catcggcatc gttctaaatt caggatgtaa tggaaatgct
     8881 agtttatatt caatcgctaa cttataaatt ggtgagtttt gtgcagcttc aatccaatca
     8941 taactaatgc catctttttc agcttgtgca atgacttctt cgtcaaatgg atttaagaat
     9001 atatctaatt gtttttcgta taaatctttc tcgtctactg ctgaagctgc ttcatgaact
     9061 cgatctgcat catataataa aacacctaaa taacgcatac gtcctgtaca agtttcagaa
     9121 cacactgtag gcatccccgc ttcaattctc gggaaacaga aagtacattt ttctgctttg
     9181 ttcgttttcc agttgaagta tactttttta tatggacaac ctgtcataca gtaacgccaa
     9241 ccacgacaag catcttggtc aactagcacg atgccatctt catcacgttt atacatagca
     9301 cctgaaggac acgatgcaac gcaacttgga ttcaagcaat gttcacacaa acgtggtaag
     9361 tacatcataa atgtttcgtc aaattggaat ttaatatctt cttctatttt ttggatgtta
     9421 ggatcttttg gacctgtaac atgaccacct gctaagtcat cttcccagtt aggtccccat
     9481 tcaatttcaa tgttatcccc cgtaatttct gaatacgctc tagcaactgg agaatgatta
     9541 cctgatttcg cagttgttaa atgttcataa ttatagttcc atggctcgta ataatcttta
     9601 attagtggca tatctggatt atagaatatt ttccctaatg caatttttga aattctactt
     9661 ccagatttta attcaagttt ccctttacga tttagtaccc aaccaccttt gtagtgttct
     9721 tggtcttccc aacgtttcgg ataccctaca cctggcttag tctctacgtt gttgaaccac
     9781 atgtactcag cacctggacg atttgtccaa gtgtttttac atgtcacact acacgtatgg
     9841 catcctatgc atttatctaa atttaatacc atcgcaactt gcgctttaat cttcaagcca
     9901 attaacctcc ttcatctttc taactgctac atataaatcc ctttggttcc caattggtcc
     9961 ataataatta aagtgataac taatttgtgc atatcctccg actagttgtg ttggtttcaa
    10021 atggattcta gtcggcgcgt tgtgtgaacc accacgtgta tctgtaattt ctgacccagg
    10081 cgtttgaata tgtttatctt gtgcatgata cataaacatt gtacctttag gcatacgatg
    10141 cgaaataact gctcttgccg ttacaacacc attacggtta tacacttcta gccaatcatt
    10201 atcttggata tcgtgttttt cagcatcttc atttgatatc caaaccgttg gaccacctct
    10261 aaatagtgtc aacatatgct tattatcttg atacattgag tgtatattcc attttccatg
    10321 aggcgttaaa taacgcagta ccaaagcatc tgtaccacct ttaattttct tatctctatc
    10381 accaaatacc attggtggta acgttggttt atatactggt aagctttcac caaactgttg
    10441 gaaaacttcg tgatccacat aataactttg acgtcctgtt aatgttctaa aaggcactaa
    10501 acgttctaca ttcgttgtaa atggtgagta acgtcggcct tgcttattag atcccgggaa
    10561 tactgctgtt ggtataactt cacgtggttg tgatgttata tttaaaaacg aaattttttc
    10621 agcagcacgc tcactagaaa tatctttcaa tggcatacca gtttgttgtt caagatcctc
    10681 atatgatttc tgtgataact ttccattcgt agctgatgaa atattaagta tggcatcagc
    10741 gacattacgt gctgtatcaa tacgtggacg attcgttctg acagaatctt catttgtgtc
    10801 actccacgtg cctaacatac tttttagttc ttcgtactgc tcactgacac cgaaacttac
    10861 accatgtgct ccaactttcc ctttttcaag tacaggacca agcgtgacat atttgtcgta
    10921 aattttagtg tagtcgcgtt ctacaattgc aaagttaggc attgtacgtc caggtaccgc
    10981 ttcaatttca cccttcgacc aatctttcac tacgccgtat ggtgttgaaa tttcttgctt
    11041 tgtatcatga ctaagtggag ttgtcacaac atctttaaac gttccaggta aatagtcttt
    11101 tgccatttct gaaaatgctt ttgccaatgt tttataaata tcccagtctg aacgtgattc
    11161 ccataatgga tcaatggcag gattgaaagg atgtacatat ggatgcatat ccgttgatga
    11221 taaatcatgt ttttcatacc aagttgctgc cggtaaaaca atgtcagaat ataacggtgt
    11281 tgccgtcatt ctgaagtcta aagagaccac taaatctaac ttacctgttg tttcttcacg
    11341 ccacgtaatt tcttctggct tttcatcttc atttggtgta gctaataacc ctgattttgt
    11401 gccaagtaaa tgcttcataa agtattcttg accttttgca gaacttgaaa ttaagtttga
    11461 acgccatata aataatgatt ttggatgatt ctttttcaaa tcaggatctt ctattgcaaa
    11521 ttgtgtttgt tttgatttca tttcatcaat tgcacgttgc aaaatcgctt catttgaatc
    11581 tataccttca tctttagctt cttctgcaaa caacaagcta tttttattaa attgtggata
    11641 tgatggtaac caaccaagtc tagctgctaa cacattataa tcagctggat gttgatgttt
    11701 taactcctct gttttagcta atggagattt taaacgatct acatttgact cttcatattt
    11761 ccattggtct gtagcaaaat aaaaccaact tgttccgttt tgcaaacgtg gtggtccttg
    11821 ccagtctttc gcaaatgcga cagtactcca tccttcaatt gggcgacatt tttcttgtcc
    11881 cacatagtga gcccaaccgc caccattcac accttgacag ccacataaca taactaagtt
    11941 taagattgaa cgataaatcg tatctgagtt aaaccaatgg ttaatacccg cacccatgat
    12001 aatcattgaa cgcccttcag tatcgatagc gttttgcgca aattctttcg ctacttgaat
    12061 gacaacactt tgttttacgc ctgaaatgcc ttcttgccaa gcaggtgtat attttgattc
    12121 tgcatcgtcg tatccttttg attctaattt atgatcaaaa cgacgcacgc catattgact
    12181 tgccattaag tcaaaaattg tagcaatacg gactttgtca ccatttgcta aagtgacttg
    12241 tcgagttgga attggacgat tgaatatccc atctccatca ctatcaaagt atgggaattg
    12301 aattgtttct aattcatatc caccttctgt cattgataat gtagggttaa ttttagaacc
    12361 atcttctgtt tctagtttta agttccactt cttaccttct tcccaacgtt gccccattgt
    12421 gccattaggt accactaaac tgtcactgat tgtgtcgtgg attaccggtt tccattcact
    12481 ttgctctgtc gtttgtccta agtcacttgc tcttaaaaat ctacccgctt tatatccatt
    12541 ttcatcttca tctaacatga tgataaatgg catgtctgta tattgtttcg cataattaat
    12601 aaagcgttca ttcggttgat taacataatg ctcttgtaaa ataacatgtg tcatcgcttg
    12661 agcaattgca gcatctgaac caggattcgg ggctaaccag ttatcagcaa acttcacatt
    12721 ttctgcataa tcaggtgcta ctgaaataac ttttgttcct ttatagcgaa cttctgtcat
    12781 aaaatgtgcg tctggcgtac gcgttagtgg tacattagag ccccacataa taatgtatga
    12841 tgcgttatac cagtcacttg attcaggcac atctgtttgc tctccccaaa tttgtggaga
    12901 ggcaggtggt aaatctgcat accagtcata aaaactaagc atttcaccac caagcaaatt
    12961 gatgaatcga gcacctgctg cataactaat catcgacatc gctggaatag gtgtaaatcc
    13021 tgcgattcga tctggaccat attttttaat tgtatatagt aattgtgctg cgataatatc
    13081 cgtaacatct ttccaatttg aacgcacatg tccacccata ccacgggctt gcttatactg
    13141 tttggctttg tcttcatttt caacaataga agcccatgca gccacacgat tgccattgtt
    13201 ttcttctaat gcttcagtcc ataaatccca aagcttccca cgaatatatg gatatttaat
    13261 tcgaagtggg ctgtattcat accaagagaa tgatgcacca cgaggacagc ctctcggttc
    13321 atattcaggc atatccggac cacaactagg atagtcagtt tgttgatttt cccaggtaat
    13381 cacaccattt ttcacaaaga ctttccatga acatgatcca gtacagttaa caccatgcgt
    13441 tgttcttact tctttatcat ggctccaacg ttctctgtac attttttccc attctctact
    13501 tttactttct aggatcgacc aattcccatt aaatttttct gttggcttaa agaaattcaa
    13561 tccaaatttt cccatattta tatcctccta cgtataaaaa tacgatgtgt agatgtcgtg
    13621 tttttaaata ctaaaaatgc ccaagactat tgctttaatt agattgtaca ttttttcaca
    13681 aatataaaat attagggaat tacctaatta cttaaggatt ttccctatca ataattggat
    13741 tttattgaaa ttttacacaa tcacatatga ccatgtttat tgccaatcta aatcgttcaa
    13801 atttggcaca acgacaaata aggcttcaac acgaatatat tctctcggtt gaaaccttac
    13861 ttattcattt tttataaatt agtgacataa cactgtttta gcatctgcac gatcggttga
    13921 aatatatgtt acattttctt gctgcttaat aaacgcatca tagtaatcat attgcgacga
    13981 atgatatgtg ccattcgatg aatcatttgg gtttagcaaa cagccataac cttcgtcata
    14041 taaatgttca cagaggataa gggcgtcatg tttagcacca cttactacat aaaattgctt
    14101 cgtaggatca tatgatttag gagtgttttc agtataacca acaacttccc caataataca
    14161 tatacctggt ttcgcctcaa ttgaatagtg ttgcaatttt gaaataatat tacttaaatg
    14221 ccccttaaca acaaactcgt taaaacacga tgcttgaaag acaatcgcta tcggataatc
    14281 aatatctgtg tactgttgta tctgtgtgat aattttccct aaacgtttta cccccatata
    14341 aatcgctaac gtaccaccat tcactaagga attgacatcc acttcatttt cttctgaatc
    14401 tttaaagtga cctgtagaaa atgtcacact tttagcaact gtacgcattg tcaaacctgt
    14461 ctgcaaagta gcaactgcag cactcgcaga tgtcacacca ggtacaattt caaacgcaat
    14521 attaaagttg tttagtgtgt caacttcttc ttgaactcgt ccaaatattg ctgggtcgcc
    14581 acctttaagc ctcacaacct tgttatatcg acgtgctgct tccacgatac agtcatttat
    14641 tttttcttgc tgaatgtgtt ttgcatacgg ctttttacca acatcgataa tttcagtagt
    14701 caaattcgca tattgtaaaa tcaacggatt cactaatcga tcatatagta taacttccgc
    14761 ttcacgtatt aaacgctcag cctttttagt caaataattc ggattacctg gtcccgcacc
    14821 tatcaagtaa accttgccat attcatctac agacatatat atacgttccc gtctgtaact
    14881 tctacctcat aaacatctac acaaccttca tcaggttctt gtacaatccc agtatttaaa
    14941 tcaatctttt gatcatggag tggacagaat acatattcac cactcactgt tccctctgac
    15001 aatggccctt gtttatgcgg acaaatattg tgaatcgcgt gaattgtacc actttcagtt
    15061 aaaaacaatc ctatttcttt gcctttgaca ataacctttt taccaattaa gggtgtcaat
    15121 tcatctaaag ttgtcacttt gattttctct ttcgtttcca tgtattacac cttctccact
    15181 tcaaagattt ttcgagcttg cgcattacta gtgattgctt cccaaggttc agcttcgact
    15241 gcttttttag catccataat acgttcaaat aattcattct gtctttctgg atcaagcaac
    15301 acttctttaa cattttcaaa ccctagtctt cttaaccacg gtgctgttct ttcagcataa
    15361 atacctgtct cgcgataata ttgcatcaaa gcaccacata atttgattac ttcatcttct
    15421 gtttctacag ttgttaaaaa ttcagctttt tcaacttctg taccaccatt accaccgata
    15481 tagatttgga atccattttc aactgagata ataccaaaat ctttaacacc tgattcaaca
    15541 caacttcttg ggcagcctga tacacccatt ttgaatttat gaggtgtatc gatgtattca
    15601 aatgtttttt ctaaacgaat gccaagtcgt gtcgtgtatt gcgtaccaaa tcgacaaaac
    15661 tctttgccga cacagctttt aactgagcgt gttttcttac cataagctga tgctgaacgc
    15721 atacctaagt cttcccatat atttggtaat tcttcttttt taactccata caaaccaaca
    15781 cgttgcgaac ctgtcacttt aactagtggc acatgatatt tcttagccac ttctcctaga
    15841 cgaatcagtt ggtctgcatc tgtaacacct ccacgcattt gaggtataac agaaaatgta
    15901 ccatcatttt gaatattcgc atggtaacgt tcgttagcaa atcttgattc tctttcatct
    15961 tcatgatcat gtggataaac catgtttaaa taatagttga ttgctggtcg acattttgga
    16021 catccacctt tatttttaaa gtttaaaaca tgtcgaactt ctttagatgt ttttaaacct
    16081 tttgctctta tttgcgttac aatttgatcg cgtgtcaaat cagtacaacc acatatacca
    16141 gcaggttttg cggcaacaaa gtcatctcct aaggtgtgct gcaatatttg agcaatttgc
    16201 ggtttacatt taccacatga attccccgct tttgttttag ccgttacttc ttcaactgtt
    16261 gtaaagccat tttccgtaat agcatttact atagtacctt tatcaacacc attacaacca
    16321 caaattgttt catcatcagc catatcagca attgatagcg atgcctcttc tccaccttta
    16381 gtaagcaatg ataccagtgt gtaatcttca gtagattcac cttttttcat catgttataa
    16441 aagcgtgaac catcatcgat atcaccatat aagactgcac cgaccacatt tccatctttt
    16501 aaaaatactt ttttatagtt attatcaaca ctattaaata tttcaatacc tttgatttca
    16561 gcattttcaa caatttgacc agcactatat agctcacaac cagaaacttt taatgatgta
    16621 aatgtagtgg aacctttgta tccatctgtt tctttattcg ttaaatgatc tgccaatact
    16681 ttaccttgtt catataaagg tgcaactaaa ccataaactt taccgttatg ttctgcacat
    16741 tcaccgactg catatacatt gctatcactt gtttgcatca catcattgac aacaatacca
    16801 cgattaacat ctagacctga ttctttggct acttctgtgt atggtcgaat acctactgcc
    16861 ataacaacta agtctgccgg aatctcgcgt ccatcagcca atttaacacc ttcaacatca
    16921 tcttctccta agatttcagt tgtgttggct tgcatttcaa acttcatacc ttgcttttct
    16981 agatctgctt taagcatatt tccagcttta cggtctaact gcatttccat caaccactca
    17041 gccaaatgca acactgttac ttccatacct tgatctaata aaccacgtgc acattctaaa
    17101 cctaataagc ccccaccgat aacaatcgct ttctttttag tcttagcaat gtccatcatt
    17161 ttttcagtgt catcaattgt tctccagcca ataacacttg gtaaggtcga acctggcact
    17221 ggaatgacaa atgctttaga tcctgtcgca aatattaatt tatcgtatgc tacttcaata
    17281 ccatttgcag tcgttacatt ttgatttgct ctatctactt caattacagg atcatttgta
    17341 attaactcga taccatgttc ctcataccac tcatatggat tcataattgt ttcttcaact
    17401 gtcattttat tttgtaaaat atttgaaagc atgatgcgat tataattagg ataaggttct
    17461 ttaccaatta ctgtaatatc atataaatca ttggcacgct ctaatatttc ttcgattgtt
    17521 cgaatgcccg ccataccgtt accaatcatt actagttttt gctttgccat aaaatatgcc
    17581 cctttactac ataatattta tttcaaaaaa aggtttaatt tttcgttagt gcttttatat
    17641 tttcattgga atcattaagc tttctaatct atctttaatg atttgcttta aaattgggtc
    17701 gaagttaatt gaaggtgtga tgtgtatatc tgtattaata accatgtcat tcatttgctg
    17761 cttcactttg ttaacaagtc ttccgtcata taaaaataaa ggtacgacaa tcaatttttg
    17821 atactgtctc gcaatatctt ctaaatcatg tataaaactg atttcaccat atagcgttct
    17881 cgcataagta ggtttattaa tctgcaaatg ttgaacgcat gtctgtaact cttcatgtgc
    17941 ttttgtaaac ttgccattaa tattgccatg tgcaacaacc ataactccaa cttgttgttc
    18001 gtcacctgct aatgcgtcac aaatacgttg ttcaattaat cgtctcatta aaggatgtgt
    18061 accaagtggc tcgcttactt ctaccgttat gtctggataa cgctgtgtca tttcatgaac
    18121 gatattcggt atatccttga gatagtgcat ggcactaaag agaagcaaag gtacaatctt
    18181 aagcttttta acgccacttt taatcaacgt cgtcattact gtttctaaat cctgatgctc
    18241 actttctaaa aatgcaatat catagtgatg tatatcatct tttactaatt cagaaataaa
    18301 tgcttctaac gcttgattct gtcgtccgtg cctcatgcca tgtgcaacaa tgatattccc
    18361 attcacattt accaaccctt tcacacgtat tgtataccaa atcatttcgt ttttgtgaaa
    18421 agaatcacat tataatgtaa aatcagggaa ttccctgatg cctgtagtca tgcatattcc
    18481 ttataaattt tccctttttg ttaaatcaaa aaagcgacca atatgttaat ccctactcaa
    18541 cattcattca tttgagcaag catcaatata tcggtcgctt gtagtgtata ttattatctt
    18601 aaaatggtgg ttggcctaga atcgtttctt caaaacgttc aggtattaat actttacgca
    18661 tgattacacc taaatcgcca tcatcatttt catgttcgct gtatatttca taacctcttt
    18721 tttcataaat tttaagtaac cacggatgca atcttgcaga tgtacctaaa gtaactgccg
    18781 ctgactttaa cgtatctcgc aaaaatgttt cttcaacata agtaagtaat tggctaccat
    18841 agcctttccc ttcatactca ggatttgtcg caaaccacca gacaaaagga tagcccgaaa
    18901 tgcttttcac acttccccaa ggatatctga ccgtaatcgt agatataatt tcatcatcaa
    18961 ttgtcatgac aaatgtagta tttttatcta tattttcttt cacagcatct aaatttgcat
    19021 ttactgaagg ccagtctatg ccaagttctc ttagaggcgt aaatgcttca tgcatgagtt
    19081 gttgcaattt ttctgcatct tgttcacttg cgagtcgaat catcgttttt gtcatattaa
    19141 tccccactct tttttaaatg atttaaccat attttatttt taaaataaat atccatcaaa
    19201 gtgtatcaat aaatttatca catgtcagaa agtatgcttc atctgaatac accaatactc
    19261 tcatgaaact tattaaaaat tactctctca acgtaaaaaa accattcaaa ttcatgaatg
    19321 gtttggaaga atgattcatt gttacgctat ttaatcacta catcttaatt attgttgctc
    19381 taaacgatta cgcttaccat ttaagaaagc ataaacgaga cctacaaaaa taccgccacc
    19441 gacaaagtta cctaagaaag caaaagcgat attttttaaa acgtgtaacc atgaaactgc
    19501 atcaaggttg aagaacacca tacctgcata taaaccagca ttgaatacaa cgtgctcata
    19561 tcccatgtat acaaagacta taacgccaca agcaatgaag aatgcttttg tcaatccgcc
    19621 tttgaattgc atagaaataa aaataccgat attaataaag aagttacaga aaataccttt
    19681 tgtaaaaata ttcaaccaag tcgaatcgac tgtttttttc tgaactaagg cagttaaagc
    19741 ttgtgtcatt tctggtgtca taacatgtgc atatttcatt aagaagaata atacaaaacc
    19801 acctaaaata tttccaagga aacaatataa taaaatccac atcatcttat taagagaaac
    19861 aactttataa taccagccaa ctgtaaaata cataaaatta cttgttaata attcagaatt
    19921 cgttagtaca actaagacca atcctaagct gaaagcaatt gctcccatta aattaatgag
    19981 accatcaaca tgtgtacttg cgaattgtgt tttaatacca aacataaaaa cagtaacaat
    20041 ggacaataag aaacctgcca tcatagattt tagcatgtat cgtcctggtg tttgctgtac
    20101 catcacttgt ttcatttgaa cagatgatga tattgagtct acgattgctt tagttgaata
    20161 cgtatcttca actgttttat tattttttat cacagcactt cccccattta ctattatcaa
    20221 ataaatttta cctattaatt atattagtat ttagatgtaa ttcatagatt aaaattcaga
    20281 aaattctttt taccaattca aaactaatat ttactcataa aaatagcgag atagatatcg
    20341 cgacataaaa caattggtat cattttaatt gcgctcatct cgctttatgt aagtattact
    20401 tattcttttt taaatttgaa aagtaatgta aaccatatgc aaatataccg tagcctacga
    20461 ctgtacgcaa aataaatcta acaactttat ttggtacaca tttcgaagta acagtaattg
    20521 aagataaaag tgtagtaaaa atatataata ttaatacttt aatgtaacgt tgtaccatcg
    20581 aatcatcctt cattcaatta ataatattac gttattatta taaactgaat ggcatataaa
    20641 aatttttaca tattttcaac aactttattt caataaagca tcaagttgat ctaatgtttg
    20701 attcatccct tgctcaacac ccatgtttac gacttgttga gcggcttctt ttgttggaaa
    20761 taccgatgtt gatgtaactg tcgttttcgt tgtattgctc ttggaaaatg acaaagtaat
    20821 tttcatgctt ggcattttcg tatcttttgc accttgaggt gtcgcaaatg agtcaatata
    20881 ttcaattaaa tatggacgct taaccgtttt atattctgct aatgtatagc tggtcattgt
    20941 aggtgtttta atcgcataaa atgcatcacc gcctgaaaca gcattaaagc gaaacacttt
    21001 ggtactagcg tcttttggat gaaaccattt ttcaaataat gcttttgtcg tataggcatc
    21061 aaacaccttt tcaatcggtg cttctatcgt tcttgaaaaa ataattttat tatcttcaac
    21121 tttaatcgtc atcttcccac tccctatctt ttatatttac tcatcttaac atgcattgag
    21181 taacatatgt taccaaatca tttgttataa actatagtaa tattaatcat tccctctgtt
    21241 gaaattgata actacgaaat aaaaaacaca ctctattcag ctattaacag ttgagtagag
    21301 tgtgcaaacc tgttgaatta atgcgctaac atttcttctt tgatttggtc tttatttaat
    21361 tttgaaggat aatatgttgg ccagttatcc atttctttta ataacgcgtc attatcatta
    21421 cccataaaga tatggaagtg ttctgccttt ttaggtgcaa tgttgtgatc gctaaattgg
    21481 atgaatttcg gtaagtcttt atcattacca tcgaccaatt taaacataaa tctcacgcca
    21541 cggttacctt taggatattt caatgttttc ttaccattgt attcatattt accagtgtgt
    21601 ttcttaccat ctttagtaaa tgtaatttca tttcctttta tatcaatgtt agtaatatca
    21661 gttttatatc ctttgtcata gtaagctttt aaatctttag cagatttctt cggatcattt
    21721 tcagctttat gttccatcac ttcatcaagc gtaccgtctt ttaagtaagg gtaaacagat
    21781 tgccattcac cagcataatc gcttaattca cggtctttaa cttgctcatc tttaaaatac
    21841 ccatcagaaa ttgctttatc gtgtttactt tcagctttgt cgtctttcac tttaacacca
    21901 ctgtctaaag ctttaccgat attttcaata ttcgatttca ttaatgattg atacgtaata
    21961 ttatcttttt tctgttgttc tttatttaaa gactccatgt tgtagaattt taaaggcttc
    22021 gcatctgttt ctttacgaat tgtttcagtc actttattcg caacattatc ttcgtaaaga
    22081 atatatttag cattgctatc tctaatttct ttaacaattt tagttaattc tttttgtgat
    22141 ggatcttcag cattcatgtt ttgaatacct ttttgaacaa aaccataacg atcagctaag
    22201 tatccaattg attcatgtga aatgaatact gcattacctt gcttatcttt tgtaacttgc
    22261 ttcatatcgt tatcaatttt cttaagatcg tcgtttaatt ttttgtagtt tttctcatag
    22321 tcatctttat gttttagatc ttttttcact aattcatctt taatttcttt agcgaaagtt
    22381 tggttaattt taggatctaa ccatacgtgt ggatcatatc caccatgatg atgatgatgt
    22441 tcttctttct catgatcatg tccctcatgt tcatgctctt caccatgctc gtgttgatca
    22501 gttaaaagct ttgctttatc taatttatcc tctaaagaca gttttttatc tttatctttg
    22561 atagtagatg caactttctt agcaaccgga tctaaattat cccctgtata cataaacaag
    22621 tctgacttgc ttgcacttaa tatatctttt tgtgttggtt catagctatg taaatctgtc
    22681 cctgctggat agattgatga taccttcacg tgttttccac caatttgctc tgcaaatgat
    22741 tgcaatggat aaactgtcgt tttaattgtt accttgccat ctttatcttt tccatcatca
    22801 ttcccacatg cggctaatga taaagttacg gctggtacaa gaagtaacat acctaatttc
    22861 tttttcatag tcaccctcct aaatagtaat ctttacgttt taaaattata tactcatgct
    22921 acttaaaata caagcactgt ttttataaat aatataaagt cgaatcatac tttaggtatt
    22981 taccactttt cgttttatct aatacatgac tattgtacaa atatgataca gaaaacttta
    23041 tagtatttac gaacgtcata atataagaaa aaagacaatc tctatcatat tgctaataga
    23101 aattgccttt tcatattgtc ctaaaataac ttaccctatt tttatagtgt gacttttaga
    23161 tttaataatg gtatttacat gatgctattt ttatatgctt gtcatctact gtataaacca
    23221 atctatgttc gtgattgata cgtctactat aatacccagt cagattcgat tttaactttt
    23281 caggcttacc tataccttcc aatgcaccat ttctgtcaat acttttaagt aactcattaa
    23341 tcttcttcac cattttttta tcgttctgct gaaaatactt ataatcttca aaggcttgag
    23401 gcgaaaacgt aatatttaac ctagccatta tacatctata tctttcgtta tagttttccc
    23461 acgttctaga tctgcaattg attgagctaa gtgctcagca ttatttgggt tctgttggag
    23521 gtaaagtgtt tccatcatgg agttataatc tgattctgac atgattacta cgtttttatc
    23581 atcagtagat gttacagtta ccatatcact atcatcattt acttttgtca taagtgcctt
    23641 taaattctgt cgagcgtatg aataattttt aataatcata tttatcgcct ccttttaaca
    23701 cacctcaatt gtacaaatat ctgtacaata aaacaagcga cacaaaaaaa ttactaatca
    23761 agattttgca cggggaagaa tcaataccta tcctgtactg attccctact aaaaaatgtt
    23821 tacatgataa tttccaccca tttagacttc atacattaaa aagacaatct ctatcatatt
    23881 gctaatagaa attgcctttt catattgtcc taaaaaattg gtatcactta cttatctcaa
    23941 caattaagac tatttgattt tatcttttaa taacttctca taactttcat aatcatatgg
    24001 atcttcaact ttctcgccat taataaatgc agttggtgtc gtttttatat gattatcttt
    24061 agctattttt ttatctttct ctgcagcttt ccaagacttg ctatcttttg tcttgtaatc
    24121 ttttataatt ttattttccg tctctttatc taaatgcagt tgtttaatat gtttatctaa
    24181 tagttctttt gttaaccatt ctttattttc atcttgctgg gcagcaaata attgcttttg
    24241 aaaatctaaa aatgatttag gtgcatacat caatactgca tgactcgcac gcgaaccaac
    24301 aattgagtct ttacctaaga aagctaaatt gacaaattgg tattccactt tgtgattatc
    24361 tatataattt ttacgcaact ttggcatgac tttttcatct aattctttac aataaggaca
    24421 tttatagtcg ccatatatga caactaatgg tttgccgttt ttcgaagatg tcgttgctga
    24481 ttctttttta ccgcaagctg ttaaaattaa catgctcact ataaataatg ttagtaattt
    24541 tttagtcata ataactcctg ttcatatcta gttcgtcata ttttcttcat gataatccgc
    24601 atcatgttgt tgataatatc gtctcgaatc aaaatcttgc ttatatgata cacgtttatc
    24661 actaaaatca tatgcataat aatgcacttc atcatcatta ctcaaaggtt tataagctaa
    24721 aatgataatt ttatccttat catagacata aatattagca tctttgcgtt caaaatgatc
    24781 aacacgatca ccgttgcctt ttttggcaag ttgttcttgt ttttgatttt gaattttaac
    24841 tgcttcatct atttctttca catatttatc attaccacat cctgatataa agactagtaa
    24901 taataatacc gtcgccacaa atcgcttcaa tgctcccact cctactatca acttccaact
    24961 aactttcaat ataattaata ctatacaccg tcaaacatca atgcgctaca actactacca
    25021 atgcatttaa tataaatatc caaagaaata acagttatgt atagtcaaag aaaaatatat
    25081 ttcattttct atgtgtattt acaatcagtt tttgataaaa taaaaaaata gcattataaa
    25141 taaattcaaa aattacagtt caattcagag agggatggga taaaatgaac tttgtaacgt
    25201 tgacttcgga tgagttcaat gcgtttacaa caaagcattt ttcacattac acacaatcag
    25261 ctattcatta caatcataga gttgatttaa aaggcgatgt gcatcttgta ggggttaaag
    25321 atgacaatgg tcaagtgatt gcaggatgct tattgacaga agcacgcaca cttaaatttt
    25381 tcaaatattt ttatacacat cgcgggccag tgatggatta tacaaatcaa tcattagtag
    25441 catttttctt taaagcatta acgtcatatt taaagaaaca aaattgttta tatgtccttg
    25501 tagatccata tttaattgaa aatttacgca atgcagacgg tgaaattgtt aagtcttatg
    25561 ataaccgagc atttgttaga acaatggata aattaggtta taaacaccaa ggtttccctg
    25621 taggttatga ttcaatgagc caaatccgtt ggctgtcagt gttagattta aaagataaga
    25681 ctgaagacca acttttaaaa gaaatggatt atcaaacgag acgtaatatt aaaaaaacat
    25741 atgatattgg tgtcaaaact aaaacgttaa cgattgatga aacgcaaacc tttttcgact
    25801 tattccatat ggctgaggaa aagcacggtt tcaaattccg tgagttacca tactttgaag
    25861 aaatgcaaaa actatatggt gatcacgcca tgttaaagtt agcttatatc gatttaaatg
    25921 attatttgaa aacattacaa ttgaaacaac agcaattagc tgctgagctc tcaggtgttg
    25981 aagaggcatt ggaagaaagt ccgaattcaa agaaaaataa aacgaaacga acacagttag
    26041 aacaacagtt aagcagtaat aagcgaaaaa ttgataatac aatagaacaa attgaacaag
    26101 atggtgcagt gttgaactta gcttctgctt tgtttatcta caatgagcat gaagtttatt
    26161 acttatctag tggttcaaac cctaaatata atgcttatat gggtgcctac catttgcagt
    26221 gggaaatgat taagtttgct aaagcgcatc atattgatcg ctataatttc tatggtatta
    26281 ccggtgactt ttcagagtca tcagaagatt atggcgtaca acaattcaaa aaaggattta
    26341 acgcacacgt cgaagaatat attggtgatt ttattaaacc aatcaaacct atgctttaca
    26401 aattacaaac atacttaaaa cataaacgcc gttaacagtt tatgctgtaa catcaaaaac
    26461 cacgaatctt gctagtggca tcttcgccgt aatcaaacaa gattcgtggt tctatttgtt
    26521 tattcttcat taataacatt taaaaaacgt tttagttctt cagtttttgg attgttaaaa
    26581 atctcttcag gtgccccttg ttctccaatt acaccttcat gaatgaatac aatgttatta
    26641 gatacttctc tagcaaaacg catttcatgt gtcacaatga ccattgtcat gccctcattc
    26701 gctaaatctt taatcacctt taacacatca ttcacaagtt caggatcaag tgcagatgtt
    26761 ggttcatcaa acaacatcac tttaggattc atagctaatg ctctcgcaat ggcaacacgt
    26821 tgctgttgac cacctgataa tgcatgtggt cgttgatctt tgacatgtgt caaaccaact
    26881 ttctcaagta attctagaga tttctcacga gcttcagcct ttttcaactt tttaactgta
    26941 ataagacctt ccattacatt ttctaatgcc gtcttatgcg gaaaaagatt atagctttga
    27001 aataccatac cagattgttt acgaacttct atttgtgatt ttttatcttt agatgtatat
    27061 gttttgccgt taacaaatac tgtaccttca gttggaattt ctaacgcatt aatcattcgt
    27121 aacaacgttg ttttacctga cccagatcgg ccaattaagg ttacaacctc acctttgtca
    27181 acagataaat caataccttt gatgacttca acatcattaa atgatttatg gatattgttc
    27241 aattgaatca tgagcgatac cctctttcaa tataagattc gtagatacct tggattattg
    27301 aaataataaa gcataccacc cagtacatta gcgcaactaa cacataaatt gttaaatatt
    27361 catatgttgt agacgcaact tcttgagctt ttctaaacat ttcagccact aaaataaatc
    27421 ctagtaatga tgtatctttg attaaactta aaaatgtatt acctagtgca ggtatagata
    27481 ctcgaattgc ctgcggtaaa atgatgcgct gtatcgtttg acgatatgtc ataccgatag
    27541 aatatgcagc ttctgtttgt ccttttggta tagaaataat accgccacga ataatttctg
    27601 aagcatatgc acctacattt aatgacaaac caataatggc agcgaccaca ggcgccaatg
    27661 tccattgatt atctgcatca ttagttaata atctacctaa ttctggaata ccataaaaga
    27721 tgataaataa ttgtactatc ataggtgtcc cacgaataat agatacatag acacgtgcaa
    27781 tacttcttaa aactttactc gttgaaatgc gcatcaatgc tgtaaataat gcaatgatta
    27841 accctaatac aaatgttacg agggtaatcg gaattgaata tttcaccaga ccttcgagca
    27901 taggcccaaa agcttgtttt gcggcatcaa gtgcatgtag ttgttcacta tttagattta
    27961 gaaacatctt gaccaaacca tttcttacct attttagcta attcaccgtt ttcctcgatt
    28021 tttttcaagc catcattgaa tttttgaact gtttcgtcat ccactttttt agaaaatgca
    28081 aatgcagatt tactttgttc agcgttacct ttgattgcct tgatcttagc attaggtttt
    28141 tgttttttat aatctaagta tgacagactg tcattaaatg taccatcaac acgcttagac
    28201 aataataaat ccattgattg gttaaagcca tcaacttttg taatatcagc acctttatcc
    28261 ttagctaatt taccataatt agatgtgaat gtttgtgcta acttcttacc tttaacatca
    28321 tcaaaatctt taatatcttt ttcattttca cgaataacta aaacagcact tgagaatgtg
    28381 taaggtttag aaaatttata tttcttttct ctatcaggat taatacccac ttggttcgcg
    28441 attacatcaa aacgccctgc gtctaaacct gcaaacatag aatcccaaga agtttcatta
    28501 aatttaagtt ttaaaccttc ttctttagct actgctttaa taacatcaat atcgtaacca
    28561 gttaatttac catctttatc atggaaacta aatggtgcat aagtcccctc agtaccaaca
    28621 ttaattgtct tgctatcttt actagcttcc ttgtctttag acgaattgtt cccacatgca
    28681 gctaatatga aaacgaaagc tatcaccaca aataaaagtc ttttcataga atatatctcc
    28741 ttattcttat tattctaatc ggaataaaaa tattttaatc tgaaatgccg gataagtcaa
    28801 tatgttgaac ttttgctaaa aagctttata tagctagcaa cttatattta ttgatgtgaa
    28861 tcaacttctt ttttctttcc ttgtaacata aatgaacaaa agaaactaat cactgtaatc
    28921 aatagtgcaa ataaaaatcc agcgtgataa ccatgtaaca tcgtatcaac tttaatttga
    28981 ttcatcatct caattttgtt catgccatta tagtctgaca tagttggaga aaagtttttg
    29041 cttgcatgag ataaaatagt aattaatgca gctgttccga tagaaccagc aatttgttgt
    29101 actgtgtttg tcatagatga accgtgtgcg ttcatttcag gttttaattg attcattgta
    29161 tgcgtcataa caggaattaa acctaaggcg ataccaacca ttcgaatcgc ataaaccgtt
    29221 gccaacataa ttgtcgatgt ctgttcatcc attacaacaa agtaaccagt ggtaataata
    29281 acgattgcca taccgactaa agctaatttt cttggaccga acttttcata taaggcacct
    29341 gaagtcatcg acataaatgc cataacaatt gctcctggta ataaagttaa cccagaatct
    29401 aaagctgaac gatgcaataa attttgcaca aaaattggta aaatcgtttc cgaaccaatc
    29461 attgatacca ttgtgacacc cataataatg ataccaactg taaattgttt atttttaaat
    29521 actgcaaaat ttaataatgg tgttgatagc cgatattgac gtaatacaaa taatgcgact
    29581 aaaacaacgc ctccaatcat cgaaactaat acgataggat tatcaaaacc tttttccgaa
    29641 attgaactcg ttccatacaa taacccgccg aaacctagta cagaaaaaat gacagaaata
    29701 aaatcaatag gtactttaat tgtagttcca acatttttta tcgttttaaa tccaattaaa
    29761 aatgtcacag ctgcaattgg agcgacaaca tggaaaagcg atctccagtt aaaatattca
    29821 acaaggtaac ctgaaagagt aggtccaata gctggtgcta aaccaataac gaggccaaat
    29881 atgcccatat atttaccacg ctcatgcggt tgaaaaatat ctaaaatcgt tgtcatcatt
    29941 aaaggcatca taattccagc acctaacgcc tgaataattc tagcaactaa taatgttgca
    30001 aagtgtggac tcaaaccgcc gagtaatgta cctaagaaaa agatagaaat acccactaaa
    30061 aacacttgtc ttgttgtata acgttgtata acaagcgcgg acaaaggaat aacaatccca
    30121 ttagtcaata aaaaagctgt tgtcagccat tgaacttgtg tatatgaaat ttcaaaatct
    30181 ttcataatac ttggtaaagc cgtcactaat agtgtttcat ttaataatcc aaaaaatcca
    30241 cccatcagca tagtaataat catcgttaat ttttgtttct tcgacattta aagcttcccc
    30301 ctcaccatct aaaaaacgac acacattttt agatatccgg taattatacc cattttcaaa
    30361 aaaattagca cgactttatt acaatttctt taaaacgtaa tcattactat ttacatatga
    30421 gtagttatcg gtcataatat atttacaagg agggatagag atgaaattag atttacagac
    30481 tgctcgtcgt aatttaaata gccctaacat taaaacaaga aagcgtgctt taaagattat
    30541 taagcaacac aaaagagcga aataattgtt ttaatttgac tatattgtat gtctaactat
    30601 attttcgagt atccctagct cgttaatata aactctatac ttaactattt ccttacatta
    30661 cttcacatat ttaagagctg catatacact cactccttgt gtacatgcag ctcttttttt
    30721 ataagtagta tttatctata acttctaaat catcggttaa ttcataaaca agcggtgcac
    30781 ctgttttaat ttcataatta atgatatctt catctgacac atcttcaaga tatttaatca
    30841 atgctcgaat tgaatttccg tgtgcagaaa ctaataccgt ttgaccatct agcaaatatt
    30901 gtgaaatatg atctgtccaa aatggtatca ctcgaactaa agtatctttc agactttcag
    30961 aataaggcat catacgttta tctaaatgat tatatcgacg atcagctaag taagcttcac
    31021 gttgttcttc ggtttcagca ggcggtttca catcataaga acgacgccaa atatgtactt
    31081 gttcttctcc aaattctttt ctagcatcat ctttatttaa gccttgcaat ccaccatagt
    31141 ggcgttcatt taaacgccag cttttatata caggaatcca ttgttgttta gattcagtta
    31201 aaatataatg cgttgtatct aaagcacgtg ttaataacga tgtaaaagct acatcgatgg
    31261 caatgttatt ttctcttact ttttcacctg ctctagtcgc ttcattaata ccttgttcag
    31321 ataaattaac atcttcccat ccagtaaata agtttttagc attccactcg ctttgtccat
    31381 gacgacataa aattaatttt ggcataactt ataacctctt tcctttaatc tttaggacgt
    31441 tatttcaggg atattttaag atgatttaat cttagcaatt ttcttttcaa tatgttttaa
    31501 aattcaatga ttaaatcaat tatcactaaa cattaaatac ataaatccta ttccccattt
    31561 tcatttttta attcataaat gaatcaataa ccacctaata acaaatcata ttatacacct
    31621 ttgttcgcca tttttctaag gtttaaaaaa tatttttagg tgcacctaaa aataaatgta
    31681 ataaaaacgc ctcctcagat atttatatat ctatgaagac gtttaaatac attatagatg
    31741 gtctggttct gggtgaacgt atactgagga aatacctttt ttgtgcaaat gatgttcgac
    31801 attgtcacaa atttgatgcg ctgctactaa ggaaaggtta gcatctacaa caattgtgac
    31861 atcaataaac acactacttc catggtaacg ccctttaata cttttaactt cttgtacttc
    31921 atcaacttct aaaatatcat tgcgatacgc ttctaattca gtttcattga aaccatcact
    31981 caacataaaa attgcttctt taaaaatacc aaaaccagta taaacgatta gtaagcctag
    32041 caatgttgct aaaataatat cgacaattgg gaaaccgatt tgcgtaaaaa ttaatcctat
    32101 cgccgttcca atgctgacta aactatctga taaattatct ttggcggcag aatttaaaga
    32161 actacttttc gttcttttcg ctagtctttg attgactgca aatacaatca acattacaag
    32221 accactgatt aagctgacga taattgttat tgcgttaggt acaacgtcat cttctttgaa
    32281 caaacgaggt gcattttgaa taactacttg gatacctaca aacataatga caaatgacac
    32341 caataatgaa gaaatatttt cagacttcaa atggccataa ggatgatttc gatcggcagg
    32401 tttaattgaa attttcaatc caataataac agctaaagaa acgataatat ctgtcatatt
    32461 gtttaatgcg tcggctctta cagctgcaga gttaaagaca aaacctgtga catacttaac
    32521 aatagataag attatatata caatcaaact caaataagca ccgcgttgcg ccaatttaag
    32581 attttcatta tgagacatgc gttgaaccac cttgaattag tatagtaaca atattatgaa
    32641 tgatttattt taattttaca acgtttttaa tttttataaa tttttataaa ataaaactaa
    32701 tttattcatt cgcaacccct aaaaatattt tttagccttt ctgcgaattt tatgagctag
    32761 aaaggcttat gcattagtag cgaagctatc taatgcgttc ctttattttc tgcgaatttt
    32821 atgagctaga aaggcttatg cagttgacgt tttacgtcca actgcgttcc ttcgtcttct
    32881 tcaaatttat ttgttagaaa ggcgcccaac tctccctgtt tgtgaacttt cgcctcgaaa
    32941 gttgctatgt tgggacccta tgcattagtt gcgaagctat ctaatgtcgt gacctaatta
    33001 tatagaagaa aaagtgcatc agtgacaaat caaatgagat ttctactcta ccaaactctc
    33061 ttcgaaacac aattttctcc tctatttatt agcaaactat tgcatttctc catatagtac
    33121 ttccttactt aaaatacgct gaatgttctg aattaaacgc ttttttacat agttaacact
    33181 agttaatcta ttagttaaca ttagttaata attagttaat ttccatttgt attctcatgt
    33241 gataaattct aaaagcatac aataaattta atatgtaaaa agaaagggaa tacacatgaa
    33301 aaataaatat atctcgaagt tgctagttgg ggcagcaaca attactttag ctacaatgat
    33361 ttcaaatggg gaagcaaaag cgagtgaaaa cacgcaacaa acttcaacta agcaccaaac
    33421 aactcaaaac aactacgtaa cagatcaaca aaaagctttt tatcaagtat tacacctaaa
    33481 aggtatcaca gaagaacaac gtaaccaata catcaaaaca ttacgcgaac acccagaacg
    33541 tgcacaagaa gtattctctg aatcacttaa agacagcaag aacccagacc gacgtgttgc
    33601 acaacaaaac gctttttaca atgttcttaa aaatgataac ttaactgaac aagaaaaaaa
    33661 taattacatt gcacaaatta aagaaaaccc tgatagaagc caacaagttt gggtagaatc
    33721 agtacaatct tctaaagcta aagaacgtca aaatattgaa aatgcggata aagcaattaa
    33781 agatttccaa gataacaaag caccacacga taaatcagca gcatatgaag ctaactcaaa
    33841 attacctaaa gatttacgtg ataaaaataa ccgctttgta gaaaaagttt caattgaaaa
    33901 agcgatcgtt cgtcatgatg agcgtgtgaa atcagcaaac gatgccatta ctaaattaca
    33961 aaaaaatgat tcaattgaaa acagacgttt agcacaacgt gaagttaata aagcacctat
    34021 ggatgtacaa aagcacttac agaaacaatt agacgcatta gtagctcaaa aagatgctga
    34081 aaagaaagtg gcgccaaaag ttgaggctcc tcaaattcaa tcaccacaaa ttgaaaaacc
    34141 taaagcagaa tcaccaaaag ttgaagtccc tcaaattcaa tcgccaaaag ttgaggttcc
    34201 tcaatctaaa ttattaggtt actaccaatc attaaaagat tcatttaact atggttacaa
    34261 gtatttaaca gatacttata aaagctataa agaaaaatat gatacagcaa agtactacac
    34321 tgataaatat tttaaatata aaggtacaat agataaaact gtactatcag tttttggtaa
    34381 tggatacaaa tcatacatcc aaccattaaa agttgaagat caaaaaaatt atgtatctaa
    34441 atcatatgca caagtaagaa actatgtaac tgaaacttta aacacaggta aagtattata
    34501 tgcattttat caaaatccaa aagtagttaa agctgctata actacagctg aaacagcaac
    34561 atcaatcaaa aatatcttct ctagttttac atcatttttt aaataatttt cgtaataaac
    34621 cgtgattaaa aagaaccgtt gattctcaat cgaatctacg gttctttttt cattttccat
    34681 caattaaatg tttcttcgct acttgtcagc ccactttttt acctgcaact tgttaaataa
    34741 tccttacatc gttaacgaat agttcatcat ttagttgaat cagctcaact ttattaactt
    34801 caaattttca caaactattg cgcaattcat tccccttcca cttcaagcac cttaattaaa
    34861 cattaattca atagaataag acttgcaaaa catagttatg tcgctatata aacgcctgcg
    34921 accaataaat cttctaaaca taacataatg caaaaacatc atttaacaat gctaaaaatg
    34981 tctcttcaat acatgttgat agtaattaac ttttaacgaa cagttaattc gaaaacgctt
    35041 acaaatagat tattatatat atgaacttaa aattaaatag aaagaaagtg atttctatga
    35101 ttaaaaataa aatattaaca gcaactttag cagttggttt aatcgcccct ttagctaatc
    35161 catttataga aatttctaaa gcagaaaata agatagaaga tatcgggcaa ggtgcagaaa
    35221 tcatcaaaag aacacaagac attactagca aacgattagc tataactcaa aacattcaat
    35281 ttgattttgt aaaagataaa aaatataaca aagatgccct agttgttaag atgcaaggct
    35341 tcatcagctc tagaacaaca tattcagact taaaaaaata tccatatatt aaaagaatga
    35401 tatggccatt tcaatataat atcagtttga aaacgaaaga ctctaatgtt gatttaatca
    35461 attatcttcc taaaaataaa attgattcag cagatgttag tcaaaaatta ggctataata
    35521 tcggcggaaa cttccaatca gcgccatcaa tcggaggcag tggctcattc aactactcta
    35581 aaacaattag ttataatcaa aaaaactatg ttactgaagt agaaagtcag aactctaaag
    35641 gtgttaaatg gggagtgaaa gcaaattcat tcgttacacc gaatggtcaa gtatctgcat
    35701 atgatcaata cttatttgcc caagacccaa ctggtccagc agcaagagac tatttcgtcc
    35761 cagataatca actacctcct ttaattcaaa gtggctttaa tccatcattt attacaacat
    35821 tgtcacacga aaaaggtaaa ggtgataaaa gcgagtttga aatcacttac ggcagaaaca
    35881 tggatgctac atatgcttac gtgacaagac atcgtttagc cgttgataga aaacatgatg
    35941 cttttaaaaa ccgaaacgtt acagttaaat atgaagtgaa ctggaaaaca catgaagtaa
    36001 aaattaaaag catcacacct aagtaaacag ttcaatcatt ttaaaaaatc ctgggacact
    36061 tcatacttgt ctcaggattt tttaacatat tgaatcagcc tcataacatt aaattatttt
    36121 atcgtacatt aaatttaata ataacaactg atttttataa gaacaaagta tcgcaccata
    36181 gtagatacac aaataataca aatgaagcaa tttaagttga aagcttaaat taatattctc
    36241 aagttaataa acaattaact tttagatgga ttcatcaaaa atcgtaaaaa agcacaattt
    36301 gtattttaca aacattaatt aaaaatgaaa gcaaaacatt cgtgcaatcg gttaccttaa
    36361 attgtttaca actgtcaaca ataccaaggt tttattaact atatttctca caaaattagc
    36421 ttttagcatt ccaaacaaaa aaggttaaat cgaacggaat tatgacattt ttaaagccat
    36481 tgtaaaaaaa gttgata
//
LOCUS       DAKPJH010000015        35434 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.015, whole genome shotgun sequence.
ACCESSION   DAKPJH010000015 DAKPJH010000000
VERSION     DAKPJH010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 35434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35434
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.015"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            401..1738
                     /locus_tag="OY092_000609"
     CDS             401..1738
                     /locus_tag="OY092_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HCX1075581.1"
                     /translation="MKQPILNKLESLNQEEAISLHVPGHKNMTIGHLSQLSMTMDKTE
                     IPGLDDLHHPEEVILESMKQVEKHSDYDAYFLVNGTTSGILSVIQSFSQKKGDILMAR
                     NVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRLNNDGHKLAVLTYPNYYGET
                     FNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPALTMG
                     SVLYIHKNAPYRETIIEYLSYFQTSSPSYLIMASLESAAEFYKTYDSTVFFDKRAQLI
                     ECLEKKGFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELADDYQALAILPLWH
                     HDDTYLFDSLLRKIEDMILPKKSVSKVKQTQLLTTEGNYKPKRFEYVTWCDLKKAKGK
                     VLARHIVPYPPGIPIIFKGETITENMIELVNEYLETGMIVEGIKNNKILVEDE"
     gene            1740..2357
                     /locus_tag="OY092_000610"
     CDS             1740..2357
                     /locus_tag="OY092_000610"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HCX1075582.1"
                     /translation="MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTG
                     EEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQG
                     YARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFH
                     EKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI"
     gene            2385..2714
                     /locus_tag="OY092_000611"
     CDS             2385..2714
                     /locus_tag="OY092_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HCX1075583.1"
                     /translation="MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTF
                     LCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMP
                     VDAFHQF"
     gene            2928..3854
                     /locus_tag="OY092_000612"
     CDS             2928..3854
                     /locus_tag="OY092_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HCX1075584.1"
                     /translation="MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQ
                     TDSQCETKVSTYNHPDFMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEK
                     LTVQGENSILKFLEEPPDNTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLV
                     EQNMSKPVAEMISTYTTQIDNAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIID
                     LLKQAKNKKLQSLTIAAVNGFFEDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLI
                     LMFDQLTEAHKKLNQNVNPTLVFEQIVIKGVS"
     gene            3855..4658
                     /locus_tag="OY092_000613"
     CDS             3855..4658
                     /locus_tag="OY092_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HCX1075585.1"
                     /translation="MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIV
                     KNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNERDAENALILCKDIVREQGLDMRL
                     VNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
                     CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQ
                     LPDIGEAIETPDGNGKVVALNILDISMQVKLEGHEQPLEYKLEEIETMH"
     gene            4675..5022
                     /gene="yabA"
                     /locus_tag="OY092_000614"
     CDS             4675..5022
                     /gene="yabA"
                     /locus_tag="OY092_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499035.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HCX1075586.1"
                     /translation="MDRNEIFEKIMRLEMNVNQLSKETSELKALAVELVEENVALQLE
                     NDNLKKVLGNDEPTTIDTANSKPAKAVKKPLPSKDNLAILYGEGFHICKGELFGKHRH
                     GEDCLFCLEVLSD"
     gene            5296..6021
                     /locus_tag="OY092_000615"
     CDS             5296..6021
                     /locus_tag="OY092_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HCX1075587.1"
                     /translation="MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKD
                     IVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDMARRTFQFNDVDEYITMHHMDLK
                     NVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
                     GGRLNMVHRAERLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEI
                     MPPFYIYNEDGNYSEEMKEVYYG"
     gene            6014..6262
                     /locus_tag="OY092_000616"
     CDS             6014..6262
                     /locus_tag="OY092_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HCX1075588.1"
                     /translation="MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRR
                     PVHLVYQEMYETKSEALKREYEIKTYTRQKKLRLIKER"
     gene            6264..7103
                     /gene="rsmI"
                     /locus_tag="OY092_000617"
     CDS             6264..7103
                     /gene="rsmI"
                     /locus_tag="OY092_000617"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HCX1075589.1"
                     /translation="MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCN
                     HYDIPTPLKSYHEHNKDKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREA
                     NIKVETVPGPNAGLTALMASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYE
                     SPHRVTDTLKTIAKIDATRQVSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFV
                     ILIEGAKANNEISWFDDLSINEHVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYH
                     QIS"
     gene            7388..9361
                     /gene="metG"
                     /locus_tag="OY092_000618"
     CDS             7388..9361
                     /gene="metG"
                     /locus_tag="OY092_000618"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HCX1075590.1"
                     /translation="MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDV
                     RYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHK
                     HVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGH
                     EVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRT
                     SFNWGVHVPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRF
                     HSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYY
                     LMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHE
                     LDEEMEAMALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQK
                     DMLGNVMAHLVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTES
                     IMVTGQPKPIFPRLDSEAEIAYIKESMQPPATEEEKEEIPSKPQIDIKDFDKVEIKAA
                     TIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLM
                     GQKSEGMILSAEKDGVLTLVSLPSAIPNGAVIK"
     gene            9392..10165
                     /locus_tag="OY092_000619"
     CDS             9392..10165
                     /locus_tag="OY092_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HCX1075591.1"
                     /translation="MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIE
                     RAMKLIDEYDFLYGIIGWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEMGLDYHWDKS
                     PADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAEEVGGIMHSFSGSPE
                     IADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRN
                     EPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNLNS"
     gene            10332..10868
                     /gene="rnmV"
                     /locus_tag="OY092_000620"
     CDS             10332..10868
                     /gene="rnmV"
                     /locus_tag="OY092_000620"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HCX1075592.1"
                     /translation="MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRN
                     AQQSRGVIVLTDPDFPGDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDI
                     KEALMHVSSPFDEAYESIDKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKK
                     LNAFGYTEADVRQALEDE"
     gene            10879..11772
                     /gene="rsmA"
                     /locus_tag="OY092_000621"
     CDS             10879..11772
                     /gene="rsmA"
                     /locus_tag="OY092_000621"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HCX1075593.1"
                     /translation="MLDNKDIATPSRTRALLDKYGFNFKKSLGQNFLIDVNIINNIID
                     ASDIDAQTGVIEIGPGMGSLTEQLARHAKRVLAFEIDQRLIPVLNDTLSPYDNVTVIN
                     EDILKANIKEAVENHLQDCEKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEV
                     GERLNAEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLV
                     TVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGET
                     LSIQDFAKLYEEKKKFPQLEN"
     gene            11872..12135
                     /locus_tag="OY092_000622"
     CDS             11872..12135
                     /locus_tag="OY092_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HCX1075594.1"
                     /translation="MPKSILDIKNSIDCHVGNRIVLKANGGRKKTIKRSGILKETYPS
                     VFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHHESIAH"
     gene            12444..13292
                     /locus_tag="OY092_000623"
     CDS             12444..13292
                     /locus_tag="OY092_000623"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HCX1075595.1"
                     /translation="MIYETAPAKINFTLDTLFKRNDGYHEIEMIMTTVDLNDRLTFHK
                     RKDRKIVVEIEHNYVPSNHKNLAYRAAQLFIEQYQLKQGVTISIDKEIPVSAGLAGGS
                     ADAAATLRGLNRLFDIGASLEELALLGSKIGTDIPFCIYNKTALCTGRGEKIEFLNKP
                     PSAWVILAKPNLGISSPDIFKLINLDKRYDVHTKMCYEALENRDYQQLCQSLSNRLEP
                     ISVSKHPQIDKLKNNMLKSGADGALMSGSGPTVYGLARKESQAKNIYNAVNGCCNEVY
                     LVRLLG"
     gene            13306..14130
                     /gene="purR"
                     /locus_tag="OY092_000624"
     CDS             13306..14130
                     /gene="purR"
                     /locus_tag="OY092_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HCX1075596.1"
                     /translation="MRYKRSERIVFMTQYLMNHPNKLIPLTFFVKKFKQAKSSISEDV
                     QIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEATEVVNEVITLLEEKERLLPGGY
                     LFLSDLVGNPSLLNKVGKLIASIYMEEKLDAVVTIATKGISLANAVANILNLPVVVIR
                     KDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNL
                     MNEFKAHVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFNVEPGNSLSKFS"
     gene            14147..14527
                     /locus_tag="OY092_000625"
     CDS             14147..14527
                     /locus_tag="OY092_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCX1075597.1"
                     /translation="MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSAD
                     VQAQTKQVLENLKVVLEEAGSDLDSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARS
                     CVEVARLPKDVKVEIELVSKIKEL"
     gene            14599..14901
                     /gene="spoVG"
                     /locus_tag="OY092_000626"
     CDS             14599..14901
                     /gene="spoVG"
                     /locus_tag="OY092_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HCX1075598.1"
                     /translation="MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLF
                     VAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA"
     gene            15091..15222
                     /locus_tag="OY092_000627"
     CDS             15091..15222
                     /locus_tag="OY092_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075599.1"
                     /translation="MRLNDARIFEVRKKLFLKLQRIKNNAFYMLKEYCRLNYNNDEV"
     gene            15245..16597
                     /gene="glmU"
                     /locus_tag="OY092_000628"
     CDS             15245..16597
                     /gene="glmU"
                     /locus_tag="OY092_000628"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HCX1075600.1"
                     /translation="MRRHAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLESVKGSG
                     VDQVVTIVGHGAESVKGHLGERSLYSFQEEQLGTAHAVRMAKSHLEDKEGTTIVVCGD
                     TPLITKETLETLIAHHEDANAQATVLSASIQQPYGYGRIVRNASGRLERIVEEKDATQ
                     AEKDINEISSGIFAFNNKTLFEKLTQVKNDNAQGEYYLPDVLSLILNDGGIVEVYRTN
                     DVEEIMGVNDRVMLSQAEKAMQRRTNHYHMLNGVTIIDPDSTYIGPDVTIGSDTVIEP
                     GVRINGRTEIGEDVVIGQYSEINNSTIENGACIQQSVVNDASVGANTKVGPFAQLRPG
                     AQLGADVKVGNFVEIKKADLKDGAKVSHLSYIGDAVIGERTNIGCGTITVNYDGENKF
                     KTIVGKDSFVGCNVNLVAPVTIGDDVLVAAGSTITDDVPNDSLAVARARQTTKEGYRK
                     "
     gene            16744..17709
                     /locus_tag="OY092_000629"
     CDS             16744..17709
                     /locus_tag="OY092_000629"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HCX1075601.1"
                     /translation="MLNNEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSD
                     GEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYA
                     RQDRKARSREPITAKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAK
                     HFKDDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPRPNVAEVMNIVGE
                     IEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPVLSGPAKERIENSAIKE
                     LIVTNSIHLDEDRKPSNTKELSVAGLIAQAIIRVYERESVSVLFD"
     gene            17859..18512
                     /locus_tag="OY092_000630"
     CDS             17859..18512
                     /locus_tag="OY092_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HCX1075602.1"
                     /translation="MASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVD
                     EVEFIKVIREVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTV
                     EVPVQLVGEAVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVK
                     VTGDFKIENDSAESVVTVVAPTEEPTEEEIEAMEGEQQTEEPEVVGESKEDEEKTEE"
     gene            18823..19395
                     /locus_tag="OY092_000631"
     CDS             18823..19395
                     /locus_tag="OY092_000631"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCX1075603.1"
                     /translation="MKCIVGLGNIGKCFELTRHNIGFEVVDYILEKNNFSLDKQKFKG
                     AYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRL
                     RQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEK
                     VIEHAARAIEKFVETSRFDHVMNEFNGEVK"
     gene            19395..22901
                     /gene="mfd"
                     /locus_tag="OY092_000632"
     CDS             19395..22901
                     /gene="mfd"
                     /locus_tag="OY092_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HCX1075604.1"
                     /translation="MTILTTLIKEDNHFQDLNQVFGQANTLVTGLSPSAKVTMIAEKY
                     AQSNQQLLLITNNLYQADKLETDLLQFIDAEELYKYPVQDIMTEEFSTQSPQLMSERI
                     RTLTALAQGKKGLFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGY
                     KRESVVSHIGEFSLRGGIIDIFPLIGEPIRIELFDTEIDSIRDFDVETQRSKDNVEEV
                     DITTASDYIITEEVISHLKEELKTAYENTRPKIDKSVRNDLKETYESFKLFESTYFDH
                     QILRRLVAFMYETPSTIIEYFQKDAIIAVDEFNRIKETEESLTVESDSFISNIIESGN
                     GFIGQSFIKYDDFETLIEGYPVTYFSLFATTMPIKLNHIIKFSCKPVQQFYGQYDIMR
                     SEFQRYVNQNYHIVVLVETETKVERMQAMLSEMHIPSITKLHRSMSSGQAVIIEGSLS
                     EGFELPDMGLVVITERELFKSKQKKQRKRTKAISNAEKIKSYQDLNVGDYIVHVHHGV
                     GRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGS
                     EWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQA
                     KSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQ
                     HYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKD
                     LGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPP
                     ENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANI
                     AVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQL
                     YQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRG
                     AGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIKEPESEVPEVEVDLNLDAYLPTE
                     YIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHS
                     GITLIKDKGKIIDIHLSVKATENIDGEVLFKATQPLGRTMKVGVQNNAMTITLTKQNQ
                     WLDSLNFLVKCIEESMRISDEA"
     gene            22891..24417
                     /locus_tag="OY092_000633"
     CDS             22891..24417
                     /locus_tag="OY092_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HCX1075605.1"
                     /translation="MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQ
                     QVYPIVALGMILSMNAIPSAITQNIGKYHSDEAYAKAVAYIQLVGILIFIAIFVFANN
                     IAHMMGDGHLTPMIQAASLSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGII
                     IVTIVIFVDRGWTIYEAGTIAILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQF
                     ALSVLIFAISQLIVILWQVIDSVTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLI
                     VTTTFSFALIPLLSDAIKMNNQVLMNRYANASLKITILISTAAGIGLINLLPLMNGVF
                     FKTNDLTLTLSVYMITVICVSLIMMDMALLQAQHAVRPIFVGMTAGLVIKFILNIILI
                     RLSGIIGASISTVVSLIIFGTIIHIAVTRKYHLHAMRRFFINVVLGMVFMSIVVQCVL
                     NIVTTHGRITGLIELLCAAVLGIIALFFYIFRFNVLTYKELTYLPFGSKLYQIKKGRR
                     "
     gene            24417..25610
                     /locus_tag="OY092_000634"
     CDS             24417..25610
                     /locus_tag="OY092_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HCX1075606.1"
                     /translation="MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIES
                     LQDELTFQSFDHVYEAHDQFEDVYNDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKL
                     LALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLIT
                     QVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLT
                     SVFVPKIITSTYLYHDFDFATEVIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFE
                     AIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDA
                     NAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEK
                     GESNT"
     gene            25607..25870
                     /locus_tag="OY092_000635"
     CDS             25607..25870
                     /locus_tag="OY092_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HCX1075607.1"
                     /translation="MRLDKYLKVSRLIKRRTLAKEVSDQGRITINGNVAKAGSDVKVE
                     DVLTIRFGQKLVTVKVTALNEHASKDNAKGMYEIVEERRLEEA"
     gene            25888..26280
                     /locus_tag="OY092_000636"
     CDS             25888..26280
                     /locus_tag="OY092_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HCX1075608.1"
                     /translation="MKNKVEHIENQYTSQENKKKQRQKMKMRVVRRRITVFAGVLLAI
                     IVVLSILLVVQKHRNDIDAQERKAKEAQFQKQQNEEIALKEKLNNLNDKDYIEKIARD
                     DYYLSNKGEVIFRLPEDKDSSSSKSSKK"
     gene            26385..26786
                     /locus_tag="OY092_000637"
     CDS             26385..26786
                     /locus_tag="OY092_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HCX1075609.1"
                     /translation="MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVE
                     NVEEHLSVGDEVDVKVLSIADDGKISLSIKKAKDRPRRQHTSKPSHQKPVQKAEDFEK
                     KLSNFLKDSEDKLTSIKRQTESRRGGKGSRR"
     gene            26966..28261
                     /gene="tilS"
                     /locus_tag="OY092_000638"
     CDS             26966..28261
                     /gene="tilS"
                     /locus_tag="OY092_000638"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HCX1075610.1"
                     /translation="MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTC
                     LHVNHGVRSASIEEARFLEVYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWF
                     DEMMNVLEADVLLTAHHLDDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLA
                     VSKKEIKQFQERYHIPYFEDESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQW
                     HDEQYDILQYSAKQFIQEFVKFDEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYEL
                     FNISAKTYEEWFKQFSSKKAQFSINLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIEK
                     PGNYIFNKYRLEIHSNLPKCLFPLTVRTRQSGDTFKLNGRDGYKKVNRLFIDCKVQQW
                     VRDQMPIVLDKQQRIIAVGDLYQQQTIKQWIIISKNGDE"
     gene            28266..28805
                     /gene="hpt"
                     /locus_tag="OY092_000639"
     CDS             28266..28805
                     /gene="hpt"
                     /locus_tag="OY092_000639"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HCX1075611.1"
                     /translation="MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGS
                     AMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILE
                     TGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYR
                     ELYRNLPYIGTLKPEVYSN"
     gene            29062..31155
                     /gene="ftsH"
                     /locus_tag="OY092_000640"
     CDS             29062..31155
                     /gene="ftsH"
                     /locus_tag="OY092_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HCX1075612.1"
                     /translation="MQKAFRNVLVIVIIGVIIFGLFSYLNGNGNMPKQLTYNQFTEKL
                     EKGDLKTLEIQPQQNVYMVSGKTKNDEDYSSTILYNNEKELQKITDAAKKQNGVKLTI
                     KEEEKQSVFVSILSTLIPVVVIALLFIFFLSQAQGGGSGGRMMNFGKSKAKMYDNNKR
                     RVRFSDVAGADEEKQELIEIVDFLKDNKKFKEMGSRIPKGVLLVGPPGTGKTLLARAV
                     AGEAGAPFFSISGSDFVEMFVGVGASRVRDLFDNAKKNAPCIIFIDEIDAVGRQRGAG
                     VGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGR
                     PDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAVREGKKK
                     IDMRDIEEATDRVIAGPAKKSRVISKKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIV
                     PRGQAGGYAMMLPKQDRFLMTEQELLDKICGLLGGRVSEDINFNEVSTGASNDFERAT
                     QIARSMVTQYGMSKKLGPLQFGHSNGQVFLGKDMQGEPNYSSQIAYEIDKEVQRIVKE
                     QYERCKQILLEHKEQLILIAETLLTEETLVAEQIQSLFYEGKLPEIDYDAAKVVKDED
                     SEFNDGKFGKSYEEIRKEQLEDGQRDESEDRKEEKDIAEDKKEADKSDEKDEPAHRQA
                     PNIEKPYDPNHPDNK"
     gene            31384..32265
                     /gene="hslO"
                     /locus_tag="OY092_000641"
     CDS             31384..32265
                     /gene="hslO"
                     /locus_tag="OY092_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HCX1075613.1"
                     /translation="MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAM
                     GRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNE
                     QGKLDVRRAVGTNGSIMVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQTPSSVG
                     LGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMTPVSKLIEQGLTPEGLLN
                     EILGEDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGN
                     KYKYTEEELNVLLESLA"
     gene            32444..33376
                     /gene="cysK"
                     /locus_tag="OY092_000642"
     CDS             32444..33376
                     /gene="cysK"
                     /locus_tag="OY092_000642"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HCX1075614.1"
                     /translation="MAQKPVDNITQIIGDTPVVKLRNVVDDNAADVYVKLEYQNPGGS
                     VKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQ
                     ERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHELTTG
                     PELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPG
                     PHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAA
                     IQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD"
     gene            33592..34395
                     /gene="folP"
                     /locus_tag="OY092_000643"
     CDS             33592..34395
                     /gene="folP"
                     /locus_tag="OY092_000643"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCX1075615.1"
                     /translation="MTKTKIMGILNVTPDSFSDGGKFNNVESAVTRVKAMMDEGADII
                     DVGGVSTRPGHEMVSLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDII
                     NDQWAGLYDHHMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIP
                     SNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVE
                     RDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS"
     gene            34373..34738
                     /gene="folB"
                     /locus_tag="OY092_000644"
     CDS             34373..34738
                     /gene="folB"
                     /locus_tag="OY092_000644"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HCX1075616.1"
                     /translation="MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGR
                     TDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKEN
                     PPIPGHYDGVGIEIVRENK"
     gene            34735..35211
                     /gene="folK"
                     /locus_tag="OY092_000645"
     CDS             34735..35211
                     /gene="folK"
                     /locus_tag="OY092_000645"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HCX1075617.1"
                     /translation="MIQAYLGLGSNIGDRESQLNDAIKILNEYDGINVSNISPIYETA
                     PVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRVRKERWGPRTLDVDILLYG
                     EEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVIEPRSKLKVKDLVFVDDSVKRYK"
BASE COUNT        12788 a         4756 c         7130 g        10760 t
ORIGIN      
        1 cttagcgagg atggtagcta acttacgttc cgctagagta gaacgttgct agacaagaaa
       61 tgaatgcgat gagccgcatt gagtgtgaaa ttgatatttt aataatgtgc acttttgatt
      121 atttaaatct gtgactagaa gtataagtga agacattcag aagtattata aaaagtgaac
      181 agcagtaaga tagtttttaa tcataaatca tcttactgct gtttttagat tttatgtcta
      241 atatctttta aatcgaagta caaaaaggaa attaattatt atacaataga caagctattg
      301 cataagtaac actaactttt gtcaaagaag tgttactata taattaatac ttttgaaagt
      361 aactaattcc aaaacagtgt aaataaagga agcgtatatc atgaagcaac ctattttaaa
      421 taaattagaa agtttaaatc aagaagaagc gatttctttg catgttccgg gtcataaaaa
      481 tatgactatc ggtcatttat ctcaattatc aatgacaatg gataaaactg aaatacctgg
      541 attagatgat ttacatcatc ctgaagaagt cattttggaa agtatgaagc aggtggagaa
      601 acattcagat tatgatgctt atttcttagt gaatggcacc acttcaggaa tattatctgt
      661 catccagtct ttttcacaga aaaaaggcga tatcttaatg gcaagaaatg tacataaatc
      721 tgtgttacat gcgctcgata ttagccaaca agaagggcat tttattgaaa cgcatcaaag
      781 tccgttaacg aatcattata ataaagttaa tttaagccgt ttgaataatg acggtcacaa
      841 acttgctgtg ttgacttatc ctaactatta cggtgaaaca tttaatgtag aagaggttat
      901 caaatctttg caccaattaa atattcctgt actcattgac gaagcacacg gcgcgcactt
      961 tggattgcaa ggatttccag attctacatt aaattatcaa gctgactatg ttgttcaatc
     1021 ttttcataaa acgttaccag ctttaacgat gggctcggta ctttatattc ataaaaatgc
     1081 accttataga gaaactatta tagaatatct aagctacttc caaacatcta gtccttcgta
     1141 tttgattatg gctagtttag agtcagctgc cgagttctat aaaacatatg atagtaccgt
     1201 gttttttgat aagagagcgc aattaatcga atgtttggag aagaagggtt ttgaaatgct
     1261 tcaagttgat gatccgttga agttgctgat aaaatatgaa ggttttacag gtcatgatat
     1321 tcaaaattgg tttatgaatg cacatatcta tttagaatta gcggacgact atcaagcatt
     1381 agcgatattg ccgttatggc atcatgatga tacgtattta tttgattcgc ttttacgtaa
     1441 aattgaagat atgattttac cgaaaaaatc agtttctaaa gttaaacaaa cacaactttt
     1501 aacaactgaa ggtaactata aaccaaaacg ctttgaatat gttacttggt gtgatttgaa
     1561 aaaggcaaaa ggtaaagttc tggcgcgaca tattgtcccg tatccgccag ggattcctat
     1621 tattttcaaa ggagaaacaa taactgaaaa tatgatagaa ttggtaaatg aatatctgga
     1681 aactggaatg atagttgaag gaattaaaaa taataaaatt ttagttgagg atgaataaaa
     1741 tgtcagcttt tataactttt gagggcccag aaggctctgg aaaaacaact gtaattaatg
     1801 aagtttacca tagattagta aaagattatg atgtcattat gactagagaa ccaggtggtg
     1861 ttcctactgg tgaagaaata cgtaaaattg tattagaagg caatgatatg gacattagaa
     1921 ctgaagcaat gttatttgct gcatctagaa gagaacatct tgtattaaag gtcataccag
     1981 ctttaaaaga aggtaaggtt gtgttgtgtg atcgctatat cgatagttca ttagcttatc
     2041 aaggttatgc tagagggatt ggcgttgaag aagtaagagc attaaacgaa tttgcaataa
     2101 atggattata tccagacttg acgatttatt taaatgttag tgctgaagta ggtcgcgaac
     2161 gtattattaa aaattcaaga gatcaaaata gattagatca agaagattta aagtttcacg
     2221 aaaaagtaat tgaaggttac caagaaatca ttcataatga atcacaacgg ttcaaaagcg
     2281 ttaatgcaga tcaacctctt gaaaatgttg ttgaagacac gtatcaaact atcatcaaat
     2341 atttagaaaa gatatgatat aattgttaga agaggtgtta taaaatgaaa atgattatag
     2401 cgatcgtaca agatcaagat agtcaggaac ttgcagatca acttgttaaa aataacttta
     2461 gagcaacaaa attggcaaca acaggtgggt ttttaagagc gggtaataca acattcttat
     2521 gtggtgtcaa tgatgaccgt gtagatgaaa tattgtctgt gattaatcaa acgtgtggta
     2581 atagagaaca gttggtttca cctattacac ctatgggagg cagtgcggat tcgtacattc
     2641 catatccagt tgaagttgaa gttggcggtg ctactgtatt tgttatgcca gttgatgcat
     2701 tccatcaatt ttaattctat aatacaatca tcaattagag atacttaaaa tagtgtatta
     2761 ataagttatt aacaattttg ggttgcttga ctgcgactag ttcagatgcc aatagatttg
     2821 atttttgtgg ttctaaaaat aatcacaaat catggtcgct attgttgcag taattagttg
     2881 ctctttggca acctttttat ataaaagcaa aagggagttt gtaatgaatg gatgaacagc
     2941 aacaattgac gaatgcatat cattcaaata aattatcgca tgcctattta tttgaaggtg
     3001 atgatgcaca aacgatgaaa caagttgcga ttaattttgc aaagcttatt ttatgtcaaa
     3061 cagatagtca atgtgaaaca aaggttagta catataatca tccagacttt atgtatatat
     3121 caacaactga gaatgcaatt aagaaagaac aagttgaaca acttgtgcgt catatgaatc
     3181 aacttcctat agaaagcaca aataaagtgt acatcattga agactttgaa aagttaactg
     3241 ttcaagggga aaacagtatc ttgaaatttc ttgaagaacc accggacaat acgattgcta
     3301 ttttattgtc tacaaaacct gagcaaattt tagacacaat ccattcaagg tgtcagcatg
     3361 tatatttcaa gcctattgat aaagaaaagt ttataaatag attagttgaa caaaacatgt
     3421 ctaagccagt agctgaaatg attagtactt atactacgca aatagataat gcaatggctt
     3481 taaatgaaga atttgattta ttagcattaa ggaaatcagt tatacgttgg tgtgaattgt
     3541 tgcttactaa taagccaatg gcacttatag gtattattga tttattgaaa caggctaaaa
     3601 ataaaaaact gcaatcttta actattgcag ctgtgaatgg tttcttcgaa gatatcatac
     3661 atacaaaggt aaatgtagag gataaacaaa tatatagtga tttaaaaaat gatattgatc
     3721 aatatgcgca aaagttgtcg tttaatcaat taattttgat gtttgatcaa ctgacggaag
     3781 cacataagaa attgaatcaa aatgtaaatc caacgcttgt atttgaacaa atcgtaatta
     3841 agggtgtgag ttagatgcca aatgtaatag gtgttcagtt tcaaaaagcg ggaaaattag
     3901 aatattatac acctaatgat atacaagtag atatagatga ctgggtagtt gtcgaatcta
     3961 aaagaggcat agagataggt attgttaaaa atccattaat ggatattgct gaagaggatg
     4021 ttgtgttacc tcttaaaaat attattcgcg ttgctgatga caaagatatt gataaattta
     4081 attgtaatga acgagatgct gaaaatgcat taatactatg taaagacatt gtaagagaac
     4141 aaggtttgga catgcgttta gtcaattgcg aatatacatt agataaatcg aaagttattt
     4201 ttaattttac ggcggatgat cgtattgatt ttagaaaatt agtaaaaata ttagcgcaac
     4261 atttaaaaac acgtatcgag ttgagacaaa ttggtgtaag ggatgaagcc aaattgcttg
     4321 gcggtatcgg accttgtggt aggtcgttat gttgttctac atttttaggg gattttgaac
     4381 cagtatcgat taagatggct aaggatcaaa atttatcatt aaatccaact aaaatttctg
     4441 gtgcatgtgg tcgtttgatg tgttgtttaa aatatgaaaa tgactattat gaggaagtac
     4501 gtgcacaatt acctgatatt ggtgaagcaa ttgaaacgcc tgatggtaac gggaaagtag
     4561 ttgctttaaa tatattagac atttctatgc aggtgaagct tgagggacat gaacagccac
     4621 ttgaatataa attagaagaa atagaaacta tgcattaagg aggcattatt acatttggat
     4681 cgcaatgaaa tatttgaaaa aataatgcgt ttagaaatga atgtcaatca actttcaaaa
     4741 gaaacttcag aattaaaggc acttgcagtt gaattagtag aagaaaatgt agcgcttcaa
     4801 cttgaaaatg ataatttgaa aaaggtgttg ggcaatgatg aaccaactac tattgatact
     4861 gcgaattcaa aaccagcaaa agctgtgaaa aagccattac caagtaaaga taatttggct
     4921 atattgtatg gagaaggatt tcatatttgt aaaggcgaat tatttggaaa acatcgacat
     4981 ggtgaagatt gtctgttctg tttagaagtt ttaagtgatt aatcaagcac actcaaatag
     5041 tgttataatt ataaatgaat atggtttgga taagtctgag acaatgcatg tttcaggctt
     5101 taattgtgta taaagttttg gtgattgcat aagagatagc ggtactaaat gttattatta
     5161 agtgtgcacg cagtatcatt agttataaaa tgtagctgtt aaaagtcaaa aatacatcga
     5221 atgtagatag gcatataata taaaaagaga tttcaattac tcaatagaaa aaggttgtct
     5281 tcataggagt taaaaatgtt aaaagagaat gaacgatttg atcaactaat caaagaagat
     5341 tttagtatta ttcaaaatga tgatgttttt tcgttttcaa cggatgcttt gttgttaggg
     5401 cattttacaa aacctagaac aaaagatatt gtgttggact tatgttcagg caatggggtg
     5461 ataccgttgt tattgtttgc gaaacatcca cgacatatag aaggtgttga gattcaaaaa
     5521 acacttgtcg atatggcgcg acgcacattt caattcaatg atgttgatga atatataaca
     5581 atgcatcaca tggatttgaa aaacgttact aaagtattta aaccttcaca atatacttta
     5641 gtaacgtgta atccacctta ttttaaagag aatcagcaac accaacatca aaaagaagca
     5701 cataagatag cgagacatga gattatgtgt acacttgaag attgcatgat tgcagcccgt
     5761 catttattaa aagaaggtgg caggctaaac atggtacatc gtgcagagag actaatggat
     5821 gtcttgtttg aaatgagaaa agtgaatatt gaacctaaga aagtcgtttt tatatatagt
     5881 aaagtaggga aatcagcaca aacgatagta gtagaaggtc gaaaaggtgg aaatcaaggt
     5941 ttagaaatca tgcccccatt ttatatttat aatgaagatg gtaattatag cgaagaaatg
     6001 aaggaagtat attatggata gtcattttgt atatattgta aaatgtagtg atggaagttt
     6061 atatacagga tacgctaaag acgttaatgc acgtgttgaa aaacataacc gaggtcaagg
     6121 agccaaatat acgaaagtaa gacgtccggt gcatttagtt tatcaagaaa tgtatgagac
     6181 aaagtctgaa gcattgaagc gtgaatatga aattaaaact tataccagac aaaagaaatt
     6241 gcgattaatt aaggagcgat agtatggctg tattatattt agtgggcaca ccaattggta
     6301 atttagcaga tattacttat agagcagttg atgtattgaa acgtgttgat atgattgctt
     6361 gtgaagacac tagagtaact agtaagctgt gtaatcatta tgatattcca actccattaa
     6421 agtcatatca cgaacataac aaggataagc agactgcttt tatcattgaa cagttagaat
     6481 taggtcttga cgttgcgctc gtatctgatg ctggattgcc cttaattagt gatcctggat
     6541 acgaattagt agtggcagcc agagaagcta atattaaagt agagactgtg cctggaccta
     6601 atgctgggct gacggctttg atggctagtg gattaccttc atatgtatat acatttttag
     6661 gatttttgcc acgaaaagag aaagaaaaaa gtgctgtatt agagcaacgt atgcatgaaa
     6721 atagcacatt aattatatac gaatcaccgc atcgtgtgac agatacatta aaaacaattg
     6781 caaagataga tgcaacacga caagtatcac tagggcgtga attaactaag aagttcgaac
     6841 aaattgtaac tgatgatgta acacaattac aagcattgat tcagcaaggc gatgtaccat
     6901 tgaaaggcga attcgttatc ttaattgaag gtgctaaagc gaacaatgag atatcgtggt
     6961 ttgatgattt atctatcaat gagcatgttg atcattatat tcaaacttca cagatgaaac
     7021 caaaacaagc tattaaaaaa gttgctgaag aacgacaact taaaacgaat gaagtatata
     7081 atatttatca tcaaataagt taatcacttt atcgattata tgaaatttta aacgatttta
     7141 taaacgcaag ctgtaatttt aaatggtaag tcatcatttt gcattgatac tgataaaatg
     7201 atgttgacta tgataaaaaa atgatgacat cgacgttttt taatgtaaaa taaatacatt
     7261 gaaagtaata aataccttaa cattgaataa gatgaaaatg agatgacgag ataaatgttc
     7321 gcgtccgttg aaatgcatag aaatcttaga tattatttga agtgagacat tacgaggagg
     7381 aacagttatg gctaaagaaa cattttatat aacaacccca atatactatc ctagtgggaa
     7441 tttacatata ggacatgcat attctacagt ggctggagat gttattgcaa gatataagag
     7501 aatgcaagga tatgatgttc gttatttgac tggaacggat gaacacggtc aaaaaattca
     7561 agaaaaagct caaaaagctg gtaagacaga aattgaatat ttggatgaga tgattgctgg
     7621 aattaaacaa ttgtgggcta agcttgaaat ttcaaatgat gattttatca gaacaactga
     7681 agaacgtcat aaacatgtcg ttgagcaagt gtttgaacgt ttattaaagc aaggtgatat
     7741 ctatttaggt gaatatgaag gttggtattc tgttccggat gaaacatact atacagagtc
     7801 acaattagta gacccacaat acgaaaacgg taaaattatt ggtggcaaaa gtccagattc
     7861 tggacacgaa gttgaactag ttaaagaaga aagttatttc tttaatatta gtaaatatac
     7921 agaccgtcta ttagaattct atgaccaaaa cccagatttt atacaaccac catcaagaaa
     7981 aaatgaaatg attaacaact tcattaaacc aggacttgct gatttagctg tttctcgtac
     8041 atcatttaac tggggtgtcc atgttccgtc taatccaaaa catgttgttt atgtttggat
     8101 tgatgcgtta gttaactata tttcagcatt aggctattta tcagatgatg agtcactatt
     8161 taacaaatac tggccagcag atattcattt aatggctaag gaaattgtgc gattccactc
     8221 aattatttgg cctattttat tgatggcatt agacttaccg ttacctaaaa aagtctttgc
     8281 acatggttgg attttgatga aagatggaaa aatgagtaaa tctaaaggta atgtcgtaga
     8341 ccctaatatt ttaattgatc gctatggttt agatgctaca cgttattatc taatgcgtga
     8401 attaccattt ggttcagatg gcgtatttac acctgaagca tttgttgagc gtacaaattt
     8461 cgatctagca aatgacttag gtaacttagt aaaccgtacg atttctatgg ttaataagta
     8521 ctttgatggc gaattaccag cgtatcaagg tccacttcat gaattagatg aagaaatgga
     8581 agctatggct ttagaaacag tgaaaagcta cactgaaagc atggaaagtt tgcaattttc
     8641 tgtggcatta tctacggtat ggaagtttat tagtagaacg aataagtata ttgacgaaac
     8701 aacgccttgg gtattagcta aggacgatag ccaaaaagat atgttaggca atgtaatggc
     8761 tcacttagtt gaaaatattc gttatgcagc tgtattatta cgtccattct taacacatgc
     8821 gccgaaagag atttttgaac aattgaacat aaacaatcct caatttatgg aatttagtag
     8881 tttagagcaa tatggtgtgc ttactgagtc aattatggtt actgggcaac ctaaacctat
     8941 tttcccaaga ttggatagcg aagcggaaat tgcatatatc aaagaatcaa tgcaaccgcc
     9001 tgctactgaa gaggaaaaag aagagattcc tagcaaacct caaattgata ttaaagactt
     9061 tgataaagtt gaaattaagg cagcaacgat tattgatgct gaacatgtta agaagtcaga
     9121 taagctttta aaaattcaag tagacttaga ttctgaacaa agacaaattg tatcaggaat
     9181 tgccaaattc tatacaccag atgatattat tggtaaaaaa gtagcagttg ttactaacct
     9241 gaaaccagct aaattaatgg gacaaaaatc tgaaggtatg atattatctg ctgaaaaaga
     9301 tggtgtatta accttagtaa gtttaccaag tgcaattcca aatggtgcag tgattaaata
     9361 actgtatttt taaaaattag gagagataat tatgttaatc gatacacatg tccatttaaa
     9421 tgatgagcaa tacgatgatg atttgagtga agtgattaca cgtgctagag aagcaggtgt
     9481 tgatcgtatg tttgtagttg gttttaacaa atcgacaatt gaacgcgcga tgaaattaat
     9541 cgatgagtat gattttttat atggcattat cggttggcat ccagttgacg caattgattt
     9601 tacagaagaa cacttggaat ggattgaatc tttagctcag catccaaaag tgattggtat
     9661 tggtgaaatg ggattagatt atcactggga taaatctcct gcagatgttc aaaaggaagt
     9721 ttttagaaag caaattgctt tagctaagcg tttgaagtta ccaattatca ttcataaccg
     9781 tgaagcaact caagactgta tcgatatctt attggaggag catgctgaag aggtaggcgg
     9841 gattatgcat agctttagtg gttctccaga aattgcagat attgtaacta ataagctgaa
     9901 tttttatatt tcattaggag gacctgtgac atttaaaaat gctaaacagc ctaaagaagt
     9961 tgctaagcat gtgtcaatgg agcgtttgct agttgaaacc gatgcaccgt atctttcgcc
    10021 acatccgtat agagggaagc gaaatgaacc ggcgagagta actttagtag ctgaacaaat
    10081 tgctgaatta aaaggcttat cttatgaaga agtgtgcgaa caaacaacta aaaatgcaga
    10141 gaaattgttt aatttaaatt cataaagtta aaagtgagaa agatcaccgc cataaatgta
    10201 aacgatgcta tattcgttta atatgctatg gttctttctc acttttttaa attaaaatat
    10261 cgtgcatgtg gaatacgtgc gatagagatg gttagagctt tgaaattaag aattgtagga
    10321 aggcgtttta aatgaaaatc aatgagttta tagttgtaga aggacgagat gatactgagc
    10381 gtgttaaacg agctgttgaa tgtgatacga ttgaaacgaa tggtagtgcc atcaacgaac
    10441 aaactttaga agtaattaga aatgctcaac aaagtcgagg cgttattgta ttaacagatc
    10501 cagatttccc aggagataaa attagaagta caattactga acatgtcaaa ggtgttaaac
    10561 atgcgtatat tgatagagaa aaagctaaaa ataaaaaagg gaaaattggt gttgaacatg
    10621 ccgacttaat tgatattaaa gaagcgttaa tgcatgttag ttcacccttt gatgaagctt
    10681 atgaatcaat tgataaatct gtgctaatag agttggggtt aatcgttggg aaagatgcaa
    10741 ggcgccgtag agaaatttta agtagaaaat tgcgaatcgg ccattccaat ggtaagcagt
    10801 tattgaaaaa gttaaatgca tttggttata ccgaagcgga tgtaaggcaa gctttagaag
    10861 atgaatgagg aagtgaaaat attggataat aaagatattg caacaccatc aagaacgcga
    10921 gcgttgttag ataaatatgg ctttaatttt aaaaaaagtt taggacagaa ctttttgata
    10981 gatgtgaata tcattaataa tatcattgat gcaagtgata ttgatgcaca aactggggtg
    11041 attgaaattg gtccaggtat ggggtcattg acagaacaat tggccagaca tgctaaaagg
    11101 gtattggcat ttgaaattga tcaacgttta atacctgtat taaatgatac tctatcacct
    11161 tatgataatg tgacggtgat taatgaagat attttaaaag cgaatattaa agaagctgtt
    11221 gaaaatcatt tacaagattg tgaaaaaata atggttgttg caaacctgcc gtactatatt
    11281 acgacgccaa ttttattaaa tttaatgcaa caagatatac caattgatgg ctacgtggtg
    11341 atgatgcaaa aagaagtggg cgaacgctta aatgctgaag taggttcaaa agcatatggt
    11401 tcgttatcaa ttgtcgtaca atactataca gagactagta aagtattaac ggtacctaaa
    11461 tctgtattta tgccaccacc taatgttgat tcaatagttg taaaactgat gcagagaact
    11521 gaaccgttag taacagtaga taacgaggaa gcattcttta agttagcaaa agcagcattt
    11581 gcacaaagaa gaaagacaat taacaataac tatcaaaatt attttaaaga tggtaaacaa
    11641 cacaaagaag tgattttaca atggttagaa caagcgggga ttgatccaag acgtcgcggt
    11701 gaaacgctat ctattcaaga ttttgctaaa ttgtatgaag aaaagaaaaa attccctcaa
    11761 ttagaaaatt aaatgattga caaagcaaag cactattgtt aaaatttaaa ttttgtttga
    11821 cgaaaacgct gcaaatatgg tattatgtaa cttgtagcga ggtggagcaa tatgccaaaa
    11881 tcaattttgg acatcaaaaa ttctattgat tgtcatgtag gaaatcgtat tgtactgaaa
    11941 gccaatggag gccgtaagaa aacaataaaa cgttctggaa ttttaaaaga aacatatccg
    12001 tcagttttca ttgttgagtt agatcaagac aaacacaact ttgagagagt atcttataca
    12061 tacactgatg tgttaactga aaatgttcaa gtttcatttg aagaggataa tcatcacgaa
    12121 tcaattgcac actaaataag acatatagag atgttagacg tttcttagta taagaagtaa
    12181 atattatgat aattatttga gtgttgggca ttatgttcaa tactcttttt atttacaaaa
    12241 tgtttaacac tgatgtttcg cttatagatt ttcagtaaat ggatacttgt atttataaac
    12301 acaaatacaa gtaaatacta agtaattaga tggagaaaat tactttttta ttaaaaaaac
    12361 actaaaaaac aaattaaaat gtcaaatatt aattctcttt atgttaaaat catcatatta
    12421 agataacgaa aagagggcgg aaaatgatat atgaaacggc accagccaaa attaatttta
    12481 cgctcgatac actttttaaa agaaatgatg gctatcatga gattgaaatg ataatgacaa
    12541 cagttgattt aaatgatcgt ttaacttttc ataaaagaaa agatcgaaag atagttgttg
    12601 agattgaaca taattatgtg ccttctaatc ataaaaatct cgcatatcgt gcagcgcaac
    12661 tatttattga gcaatatcaa ctaaagcaag gtgtaacaat ttctatcgat aaagaaatac
    12721 ctgtttctgc tggcttagct ggaggttcgg ctgatgcagc agcaacttta agaggattga
    12781 atcgactttt tgatataggg gcgagtttgg aagaattggc tctactaggc agtaaaatcg
    12841 ggacagatat tccgttttgt atttataata aaactgcact atgtactgga agaggagaga
    12901 aaatcgagtt tttaaataaa ccaccttcag cttgggtgat tcttgctaaa ccaaacttag
    12961 gcatatcatc accagatata tttaagttga ttaatttaga taagcgttac gacgtacata
    13021 cgaaaatgtg ttatgaggcc ttagaaaatc gagattatca acaattatgt caaagtttgt
    13081 ctaatcgatt agagccaatt tctgtttcaa aacacccaca aatcgataaa ttaaaaaata
    13141 atatgttgaa aagtggtgca gatggtgcgt taatgagtgg aagcggacct actgtgtatg
    13201 ggctagcacg aaaagaaagc caagcaaaaa atatttataa tgcagttaac ggttgttgta
    13261 atgaagtgta cttagttaga ctattaggat agaagggttg aaaagatgag atataaacga
    13321 agcgagagaa ttgtttttat gacgcaatat ttgatgaacc atccgaataa attgattcca
    13381 ttaacttttt ttgtgaaaaa atttaaacag gcgaagtctt caataagtga agatgtccaa
    13441 attataaaaa atacattcca aaaagaaaag ttaggtacag taattactac tgctggcgca
    13501 agtggtggtg ttacgtataa accaatgatg agtaaagaag aggcgactga agttgttaat
    13561 gaggtcatta ctctattaga agagaaagaa cgtttgttac ctggcggata tttattttta
    13621 tcagatttgg taggtaatcc atcgctacta aacaaagttg gtaagttaat tgccagtatt
    13681 tacatggaag aaaaattaga tgctgttgtt accattgcga caaaaggtat ttcattggca
    13741 aatgcggttg ctaatatttt aaatttacca gtagtagtga ttagaaaaga caacaaggtg
    13801 actgaaggtt ctacagtttc aattaattac gtttcaggat cttcaagaaa aatagaaaca
    13861 atggtacttt cgaagagaac tttagcagaa aattcaaatg ttttagttgt cgatgatttt
    13921 atgagggctg gtggctctat taatggtgtt atgaatttaa tgaatgagtt taaagcccat
    13981 gtaaaagggg tatcagtact tgtagaatca aaagaagtta aacaaagatt gattgaagat
    14041 tatacttcct tagtgaaatt atctgatgta gatgaatata atcaagagtt taacgtagaa
    14101 cctggcaaca gtttatctaa gttttcataa aaggagtttt agtattatga aaatcattaa
    14161 cacaacaaga ttaccggaag cacttggacc atattcgcat gcaacagttg tgaatggtat
    14221 ggtttatact tctggtcaga ttccattgaa tattgatgga catatcgtaa gcgctgatgt
    14281 tcaagcacag acaaaacaag ttttagaaaa tttaaaggtt gttttggaag aagcaggatc
    14341 tgatttggat tctgttgcga aagcgaccat tttcattaaa gatatgaatg atttccaaaa
    14401 aataaatgaa gtgtatggtc aatattttaa tgaacacaag ccagcgcgta gttgtgtaga
    14461 ggttgcgcgt ttgccaaaag atgtgaaagt agaaattgaa ttagtaagta aaattaagga
    14521 attataattt tcgattaata tgtttaatca agcttctaaa taaaacagag atatatatac
    14581 tatagggggg ctcactacat gaaagtgaca gatgtaagac ttagaaaaat acaaacagat
    14641 ggacgaatga aagcactcgt ttccattaca ttagatgaag ctttcgtaat tcatgattta
    14701 cgtgtaattg aaggaaactc tggcttgttc gttgcaatgc caagtaaacg tacaccagat
    14761 ggtgaattcc gcgacatcgc gcatcctatt aattcagata tgagacaaga aattcaagat
    14821 gcagtgatga aagtatatga tgaaacagat gaagtagtac cagataaaaa cgctacatca
    14881 gaagattcag aagaagctta atcaatttta tatttagcga tgtaatacat ttgcaataag
    14941 ttgatttgat actgtcgata aagcataaag ctttgtcggc agttttttta gtttgtatta
    15001 atgttttttt atttttaatg aaaggctaat aaatatatac gttaacagat tatgatgata
    15061 tgaaaattat tgattcattg ctgataaaaa ttgcgtttga atgatgctcg tatttttgaa
    15121 gtaagaaaaa agttgttttt aaaattacaa cgaattaaaa acaatgcctt ttatatgttg
    15181 aaagagtatt gcagattaaa ttataataat gacgaagtgt aaaatttaat gggggttaat
    15241 gttcatgcga agacacgcga taattttggc agcaggtaaa ggcacaagaa tgaaatctaa
    15301 aaagtataaa gtgctacacg aggttgctgg gaaacctatg gtcgaacatg tattggaaag
    15361 tgtgaaaggc tctggtgtcg atcaagttgt aaccatcgta ggacatggtg ctgaaagtgt
    15421 aaaaggacat ttaggcgagc gttctttata cagttttcaa gaggaacaac tcggtactgc
    15481 gcatgcagtg cgaatggcga aatcacactt agaagacaag gaaggtacga cgatcgttgt
    15541 atgtggtgac acaccgctca tcacaaagga aacattagaa acattgattg cgcatcacga
    15601 ggatgctaat gctcaagcaa ctgtattatc tgcatcgatt caacaaccat atggatacgg
    15661 aagaatcgtt cgaaatgcgt caggtcgttt agaacgcata gttgaagaga aagatgcaac
    15721 gcaagctgaa aaggatatta atgaaatcag ttcaggtatt tttgcgttta ataataaaac
    15781 gttgtttgaa aaattaacac aagtgaaaaa tgataatgcg caaggtgaat attacctccc
    15841 tgatgtattg tcgttaattt taaatgatgg cggcatcgta gaagtctatc gtaccaatga
    15901 tgttgaagaa atcatgggtg taaatgatcg tgtaatgctt agtcaggctg agaaggcgat
    15961 gcaacgtcgt acgaatcatt atcacatgct aaatggtgtg acaatcatcg atcctgacag
    16021 cacttatatt ggtccagacg ttacaattgg tagtgataca gtcattgaac caggcgtacg
    16081 aattaacggt cgtacagaaa ttggcgaaga tgttgttatt ggtcagtact ctgaaattaa
    16141 caatagtacg attgaaaatg gtgcatgtat tcaacagtct gttgttaatg atgctagcgt
    16201 aggagctaat actaaggtcg gaccgtttgc gcaattgaga ccaggcgcgc aattaggtgc
    16261 agatgttaag gttggaaatt ttgtagaaat taaaaaagca gatcttaaag atggtgccaa
    16321 ggtttcacat ttaagttata ttggcgatgc tgtaattggc gaacgtacta atattggttg
    16381 cggaacgatt acagttaact atgatggtga aaataaattt aaaactatcg tcggcaaaga
    16441 ttcatttgta ggttgcaatg ttaatttagt agcacctgta acaattggtg atgatgtatt
    16501 ggtggcagct ggttccacaa tcacagatga cgtaccaaat gacagtttag ctgtggcaag
    16561 agcaagacaa acaacaaaag aaggatatag gaaataatca tttacgtatt taaaatggct
    16621 aggataaaag gataatccta tgtaatatta atgtaatctt tatgatttaa tgattcgcat
    16681 agtaatggag ttacatttta tatataatag taattgcgta agtaaataat tggaggacta
    16741 taaatgttaa ataatgaata taagaattcg tcattaaaga ttttttcatt gaaaggaaac
    16801 gaagcattag cgcaagaagt tgctgaccaa gtaggaattg aactaggtaa atgttcagtt
    16861 aaacgtttta gtgatggaga aattcaaatt aatatcgaag agagtattcg tggttgtgac
    16921 gtatttatta ttcaaccaac atcatatcct gtgaatctac atctaatgga attattaatt
    16981 atgattgatg cttgtaaacg tgcttctgca gcaacaatca atattgtagt gccatattat
    17041 ggatatgcaa gacaagatag aaaagcccgt agccgtgagc caatcacagc taaattagtt
    17101 gcaaacttaa tagaaacagc tggcgcaact cgtatgattg cgttagactt acatgcacca
    17161 caaattcaag gattctttga tattccaatt gaccacttaa tgggtgtgcc aattcttgct
    17221 aaacatttca aagatgatcc gaatattaac ccagaagaat gtgtcgttgt ttcaccagac
    17281 catggcggtg ttacacgtgc acgtaaatta gctgacattt taaaaactcc aattgcaatt
    17341 atagataaac gtcgtcctag accaaatgtt gctgaagtga tgaacattgt tggtgagatt
    17401 gaaggacgta cggcaattat tattgacgat attattgata cagcaggtac aatcacttta
    17461 gctgcacaag cattaaaaga taaaggtgct aaagaagtat atgcttgttg tacacaccct
    17521 gttttatcag gaccggctaa agaacgtatc gaaaattctg ctataaaaga attaatcgta
    17581 acaaactcaa ttcatttaga tgaagaccgc aaaccatcta acactaaaga attatctgtt
    17641 gctggtttaa tcgcacaagc tatcattcgt gtatacgaaa gagaatcagt tagcgtatta
    17701 tttgactaat atttaaaagg cgtttgacga acatatccca aacgtgtata atagtttcgt
    17761 tcgtgattat acgaataaat aaacacttgc aagcaacgat gatgttgatg ggtaagtgag
    17821 gtgctcgttt tgagcaaaaa tgaaaggtgg aaatgagaat ggcttcatta aagtcaatca
    17881 tccgtcaagg taaacaaaca cgttcagatc ttaaacaatt aagaaaatct ggtaaagtac
    17941 cagcagtagt atacggttac ggtactaaaa acgtgtcagt taaagttgat gaagtagaat
    18001 tcatcaaagt tatccgtgaa gtaggtcgta acggtgttat cgaattaggc gttggttcta
    18061 aaactatcaa agttatggtt gcagactacc aattcgatcc acttaaaaac caaattactc
    18121 acattgactt cttagcaatc aatatgagtg aagaacgtac tgttgaagta ccagttcaat
    18181 tagttggtga agcagtaggc gctaaagaag gcggcgtagt tgaacaacca ttattcaact
    18241 tagaagtaac tgctactcca gacaatattc cagaagcaat cgaagtagac attactgaat
    18301 taaacattaa cgacagctta actgttgctg atgttaaagt aactggcgac ttcaaaatcg
    18361 aaaacgattc agctgaatca gtagtaacag tagttgctcc aactgaagaa ccaactgaag
    18421 aagaaatcga agctatggaa ggcgaacaac aaactgaaga accagaagtt gttggcgaaa
    18481 gcaaagaaga cgaagaaaaa actgaagagt aattttaatc tgttacatta aagtttttat
    18541 actttgttta acaagcactg tgcttatttt aatataagca tggtgctttt tgtgttatta
    18601 taaagcttaa ttaaacttta ttgctttgta ctaaagttta attaatttta gtgagtaaaa
    18661 gacattaaac tcaacaatga tacatcataa aaatttttat gtactcgatt ttaaaataca
    18721 tacttactaa gctaaagaat aatgataatt gatggcaatg gcggaaaatg gatgttgtca
    18781 ttataataat aaatgaaaca attatgttgg aggtaaacac gcatgaaatg tattgtaggt
    18841 ctaggtaata taggtaaatg ttttgaactt acaagacata atatcggctt tgaagtcgtt
    18901 gattatattt tagagaaaaa taatttttca ttagataaac aaaagtttaa aggtgcatat
    18961 acaattgaac gaatgaacgg cgataaagtg ttatttatcg aaccaatgac aatgatgaat
    19021 ttgtcaggtg aagcagttgc accgattatg gattattaca atgttaatcc agaagattta
    19081 attgtcttat atgatgattt agatttagaa caaggacaag ttcgcttaag acaaaaagga
    19141 agtgcgggcg gtcacaatgg tatgaaatca attattaaaa tgcttggtac agaccaattt
    19201 aaacgtattc gtattggtgt gggaagacca acgaatggta tgacggtacc tgattatgtt
    19261 ttacaacgct tttcaaatga tgaaatggta acgatggaaa aagttatcga acacgcagca
    19321 cgcgcaattg aaaagtttgt tgaaacatca cgatttgacc atgttatgaa tgaatttaat
    19381 ggtgaagtga aataatgaca atattgacaa cgcttataaa agaagataat cattttcaag
    19441 accttaatca ggtatttgga caagcaaaca cactagtaac tggtctttcc ccgtcagcta
    19501 aagtgacgat gattgctgaa aaatatgcac aaagtaatca acagttatta ttaattacca
    19561 ataatttata ccaagcagat aaattagaaa cagatttact tcaatttata gatgctgaag
    19621 aattgtataa gtatcctgtg caagatatta tgaccgaaga gttttcaaca caaagccctc
    19681 aactgatgag tgaacgtatt agaactttaa ctgcgttagc tcaaggtaag aaagggttat
    19741 ttatcgttcc tttaaatggt ttgaaaaagt ggttaactcc tgttgaaatg tggcaaaatc
    19801 accaaatgac attgcgtgtt ggtgaggata tcgatgtgga ccaatttctt aacaaattag
    19861 ttaatatggg gtacaaacgg gaatccgtgg tatcgcatat tggtgaattc tcattgcgag
    19921 gaggtattat cgatatcttt ccgctaattg gggaaccaat cagaattgag ctatttgata
    19981 ccgaaattga ttctattcgg gattttgatg ttgaaacgca gcgttccaaa gataatgttg
    20041 aagaagtcga tatcacaact gcaagtgatt atatcattac tgaagaagtg atcagccatc
    20101 ttaaagaaga gttaaaaact gcatatgaaa atacaagacc caaaatagat aaatcagtgc
    20161 gcaatgattt gaaagaaacg tatgaaagct ttaaattatt cgaaagtaca tactttgatc
    20221 atcaaatact acgtcgttta gtagcgttta tgtatgaaac accttcgaca attattgagt
    20281 atttccaaaa agatgcaatc attgcagttg atgaatttaa tcgtattaaa gaaactgaag
    20341 aaagtttaac agtagagtct gattcgttta ttagcaatat tattgaaagt ggtaatggat
    20401 ttataggaca aagttttata aaatatgatg attttgaaac attgattgaa ggctatcctg
    20461 tcacttattt ttcattattc gctacaacaa tgccgataaa actaaatcat attattaaat
    20521 tttcatgtaa acctgtccaa caattttatg ggcaatatga cattatgcgt tctgaatttc
    20581 aacgatatgt caatcaaaat tatcatattg tggttttggt cgaaactgaa actaaagttg
    20641 aacgtatgca agcgatgtta agtgaaatgc atattccatc aataacaaaa ttgcatcgct
    20701 caatgtcatc ggggcaagca gtgattattg aaggcagttt atctgaagga tttgaactac
    20761 ctgatatggg attagttgtc attactgagc gtgagctttt taaatcaaaa cagaaaaagc
    20821 aacgaaaacg tacgaaagct atctcaaatg ctgaaaaaat taagtcttac caagatttaa
    20881 atgtgggaga ttatattgtt catgtgcatc atggtgttgg tagatattta ggtgttgaga
    20941 cgctcgaagt ggggcaaacg catcgggatt atattaaatt gcaatataaa ggtacggatc
    21001 aactatttgt tccagtagat caaatggatc aagttcaaaa atatgtagct tcggaagata
    21061 agacgccaaa attaaataaa ctcggtggca gtgaatggaa aaaaacaaaa gctaaagttc
    21121 aacaaagtgt tgaagatatt gctgaagagt tgattgattt atataaagaa agagaaatgg
    21181 cagaaggtta tcaatatggg gaagacacag ctgagcaaac aacatttgaa ttagattttc
    21241 catatgaact tacgcctgac caagctaaat ctatcgatga aattaaagat gacatgcaaa
    21301 aatcgcgtcc aatggatcgc ttgctatgtg gtgatgttgg ttatggtaaa actgaagttg
    21361 cagtgagagc agcattcaaa gctgtaatgg aaggaaagca agttgcattt ttagttccta
    21421 caactatttt agctcagcaa cattatgaga cgttaattga gcgtatgcaa gattttcctg
    21481 ttgaaattca attaatgagt cgttttagaa cgccaaaaga gataaaacaa actaaggaag
    21541 gacttaaaac tgggtttgtt gacatagttg ttggtacaca caaattactt agtaaagata
    21601 tacagtataa agatttaggg ctgttgattg tagatgaaga acaacgattt ggtgtacgcc
    21661 ataaagagcg tattaaaaca ttaaaacata atgtagatgt actaacattg actgcaaccc
    21721 caatacctag aacattgcat atgagtatgc taggtgtgcg cgatttgtca gtgattgaaa
    21781 cgccgccaga aaatcgtttc ccagttcaaa catatgtatt agaacagaac atgagtttta
    21841 tcaaagaagc tttagaaaga gaactatccc gtgatggcca agtgttttat ctttataata
    21901 aagtgcaatc catttatgaa aaacgagaac aactccagat gttaatgcca gatgctaaca
    21961 ttgcagttgc tcatggacaa atgacagagc gcgatttaga agaaacgatg ttaagtttta
    22021 tcaataatga atatgatatt ttagtaacga cgacgattat tgaaacaggt gtcgatgtcc
    22081 caaatgcaaa tactttgatc attgaagatg cagatcgctt tggattgagt cagttgtatc
    22141 aattaagagg tcgtgttggt cgttcaagtc gtattggtta tgcatacttc ctacatccag
    22201 caaataaggt actaactgag actgcagaag atcgattaca agcgattaaa gaatttacgg
    22261 agttaggctc aggatttaag attgcgatgc gtgatttgaa cattcgtggt gctggtaatt
    22321 tgttaggtaa acaacagcac ggctttattg atacagttgg atttgatttg tacagtcaaa
    22381 tgttagaaga agctgtaaat gaaaaacgtg gtattaagga accagaatct gaggtgccag
    22441 aagtcgaagt tgatttaaac ttggatgcat atttgccaac agagtatatt gcaaatgaac
    22501 aagctaaaat tgaaatttat aaaaagctac gaaaaactga aacatttgat caaattatcg
    22561 acattaaaga tgaattaatt gatcgtttta atgattatcc tgttgaagta gcacgtttgc
    22621 ttgatatagt ggaaataaaa gtacacgcat tacattcagg tatcacgttg attaaagata
    22681 aagggaaaat aattgatatt catttatctg taaaagccac tgaaaatatt gatggcgaag
    22741 tgctgttcaa agcaacacaa cctttaggta gaacaatgaa ggttggtgtt caaaataatg
    22801 caatgacaat tactttaacg aaacaaaatc aatggcttga tagtttgaat tttttagtta
    22861 agtgcattga agaaagtatg agaatcagtg atgaagcata aagaagcatt taatggcgtt
    22921 gtcgtgttaa ctgctgcatt aattgtcatt aaaattctga gtgctgtata tcgaattcca
    22981 tatcaaaata tattaggcga tacaggtttg tatgcatatc aacaagtgta tccaattgta
    23041 gcactaggaa tgatattatc gatgaatgcc attcctagtg caattacaca aaatatagga
    23101 aagtatcata gtgacgaagc atatgcaaaa gcagtcgctt atatacaatt agttggtata
    23161 ttaatattta ttgctatttt tgtgtttgcg aacaatattg cacatatgat gggtgatggc
    23221 catttaacac caatgattca agctgcaagt ttaagcttta tatttatagg tatgcttggc
    23281 gtgttaagag gttattatca atctgcaaat aatatgacag ttccggctat ttcccaggtt
    23341 atagaacaag ttatacgagt aggtattatc attgttacta ttgttatttt tgtagacaga
    23401 ggttggacga tatatgaagc gggaacaatt gctattttag catcaacgat aggtttttta
    23461 ggttcttcaa tttatttagt agcgcaccga ccttttaagt ttaaaatggt aaataacact
    23521 gcaaagattg tttggaaaca gttcgcactt tcggttttga ttttcgctat cagtcaatta
    23581 atcgtaattt tatggcaagt gattgatagt gttactatta ttaagtcact tcaagcgata
    23641 cgcgtgccat tcgatgttgc cataactgaa aaaggagtct atgaccgtgg tgcatcattt
    23701 attcagatgg gattgattgt aactacaaca tttagttttg cgctcattcc tctgttaagt
    23761 gacgcaatca aaatgaataa tcaggtactt atgaatcgtt atgcaaatgc gtcattaaag
    23821 attacgattt taataagtac agcagcggga ataggattaa ttaatttatt gcctttaatg
    23881 aacggtgtgt tttttaagac gaatgattta accttaacgt taagtgttta tatgattacg
    23941 gtcatttgtg tatcgttaat tatgatggat atggcattat tacaagcgca acatgctgtg
    24001 agacctattt ttgttggtat gacggcagga ttggttatta aatttatact taatatcatt
    24061 ttgattcgtt taagtggcat tattggtgcg agcattagta ctgttgtatc attaattata
    24121 ttcggtacga ttatccatat tgctgtcacg agaaaatacc acttacatgc gatgagacga
    24181 ttttttatca atgttgtttt aggtatggta tttatgtcga ttgttgttca atgcgtgtta
    24241 aacatagtga caacacacgg tagaatcact ggactcattg aattattatg tgcagcagta
    24301 ttaggtatca ttgcattgtt tttctatatt tttagattta atgttttgac atataaagag
    24361 ttaacttatt taccatttgg ttcaaagttg tatcaaatta agaaaggaag acgttgatgg
    24421 cacataccat tacgattgtt ggcttaggaa actatggcat tgatgatttg ccgctaggga
    24481 tatataaatt tttaaagaca caagataaag tttatgcaag aacgttagat catccagtta
    24541 tagaatcatt gcaagatgaa ttaacatttc agagttttga ccatgtttat gaagcacatg
    24601 accaatttga agatgtctat aatgatattg tggcgcaatt ggttgaagct gctaatgaaa
    24661 aagatattgt ctatgcggtt ccgggtcatc ctagagttgc tgagacaact acagtgaaat
    24721 tactggcttt agcaaaggac aatactgata tagatgtgaa agttttaggt ggtaaaagct
    24781 ttattgatga tgtgtttgaa gcagttaatg tagatccaaa tgatggcttc acactgttag
    24841 atgcgacatc attacaagaa gtaacactta atgttagaac gcatacattg attacgcaag
    24901 tttatagtgc aatggttgct gctaatttga aaatcacttt aatggaacga tatcctgatg
    24961 attaccctgt tcaaattgtc actggtgcac gaagcgatgg tgcggataac gttgtgacat
    25021 gcccattata tgaattggat catgatgaaa atgcattcaa taatttgacg agtgtattcg
    25081 taccaaaaat cataacatcg acatatttgt atcatgactt tgattttgca acggaagtga
    25141 ttgatacttt agttgatgaa gataaaggtt gtccatggga taaagtgcaa acgcatgaaa
    25201 cgctaaagcg ttatttactt gaagaaacat ttgaattgtt cgaagctatt gacaatgaag
    25261 atgattggca tatgattgaa gaactaggag atattttatt acaagtgtta ttgcatacta
    25321 gtattggtaa aaaagaaggg tatatcgaca ttaaagaagt gattacaagt cttaatgcta
    25381 aaatgattcg tagacaccca cacatatttg gtgatgccaa tgctgaaact atcgatgact
    25441 taaaagaaat ttggtctaag gcgaaagatg ctgaaggtaa acagccaaga gttaaatttg
    25501 aaaaagtatt tgcagagcat tttttaaatt tatatgagaa gacgaaggat aagtcatttg
    25561 atgaggccgc gttaaagcag tggctagaaa aaggggagag taatacatga gattagataa
    25621 atatttaaaa gtatcacggt taataaagcg acgtacgcta gcaaaagaag taagtgatca
    25681 aggtagaatt acaataaatg gtaatgttgc taaagctgga tcggatgtta aagttgaaga
    25741 tgtgctgacg attcgctttg gtcaaaaatt agtaacagtt aaagtaactg cattaaatga
    25801 acatgcatct aaagataacg cgaagggcat gtatgaaatc gttgaagagc gtcgacttga
    25861 agaagcgtaa attggaggtg acaagcaatg aaaaataaag tagaacatat agaaaatcag
    25921 tacacgtcgc aagagaacaa gaaaaaacaa cgtcaaaaaa tgaaaatgcg tgttgttcgt
    25981 aggcgtatta cagtatttgc gggcgtatta cttgcgataa ttgttgtttt atcaatcttg
    26041 cttgttgtcc aaaaacatcg caatgatatc gatgcacagg agcgaaaagc gaaagaagca
    26101 cagtttcaaa agcaacaaaa tgaagaaatt gcgttaaaag aaaagttgaa taatctgaat
    26161 gacaaagatt atattgaaaa aattgcgcgt gatgattatt acttaagcaa caaaggtgaa
    26221 gtgattttta ggttgccaga agacaaagat tcgtctagct caaaatcttc gaaaaaataa
    26281 atccaaattg attcaaaatt atccgagtat agacattgtg aaaaaatcca aacaaggata
    26341 taataaggga aaatcgaatc aaatcgggag gatttattta acatatgtca atcgaagttg
    26401 gaaataagct taaaggtaaa gtcactggta ttaaaaagtt tggtgcattc gtagaattac
    26461 ctgaaggaaa aagtggttta gttcacatta gtgaagtcgc agataattat gttgaaaacg
    26521 tagaagagca cctttctgtt ggtgatgaag tagacgtaaa agtattatct attgctgatg
    26581 atggaaaaat tagtctttca attaagaaag ctaaagaccg tccacgtaga caacatacga
    26641 gtaaaccaag tcatcaaaaa ccagtgcaaa aagccgaaga ttttgaaaag aaattaagca
    26701 atttcttaaa agatagtgaa gataaattaa cttcaatcaa acgtcaaaca gaatctagac
    26761 gcggtggcaa aggttcaaga cgttaattaa aataaataaa gactgtttcg ataaggaata
    26821 tatttagaat gatgcgtatc gaataatcga ttgcagcgtt agacaatcta agactgtttc
    26881 ttaaataagg agcagtctct tttatttgta atgatataac taagacttat accatttttg
    26941 aaaattgtaa aagtgaggtg atgttatgca gttaaatagt aatggttggc atgttgatga
    27001 ccatattgtt gtcgctgttt ctacaggtat tgatagtatg tgtttattgt atcaactact
    27061 aaatgattat aaagatagtt atagaaaact aacatgctta catgtcaatc atggcgttag
    27121 gtcagcttca atcgaggaag ccagattttt agaagtatac tgcgaacgtc atcacatcga
    27181 tttacatatc aaaaagttag atttgtcgca tagtctcgac cgaaataaca gcattcagaa
    27241 tgaagctcga attaaacgtt acgaatggtt tgatgaaatg atgaatgtat tagaagcgga
    27301 tgtattgcta acggcgcatc atttggacga tcaattagaa actattatgt atcgtatttt
    27361 taatgggaaa tcaacacgta ataaactagg atttgatgag ttatcgaagc gaaaaggtta
    27421 tcagatttat cgaccacttt tagctgtctc taaaaaagaa ataaaacaat tccaagagag
    27481 atatcatatt ccatattttg aagatgaatc taataaagat aacaaatatg ttagaaatga
    27541 tattcgtaat agaattattc cagctattga tgaaaataat caacttaaag tatcgcattt
    27601 attaaaatta aaacaatggc atgatgaaca atatgatatt ttgcaatatt cagctaaaca
    27661 atttattcaa gaatttgtga agtttgatga acagtcaaaa tatttagagg tttctagaca
    27721 agcttttaat aacttaccaa actcattaaa gatggttgtg ttggattgcc tattatcaaa
    27781 gtattatgag ttgtttaata ttagtgctaa aacatacgaa gagtggttta aacaatttag
    27841 tagtaagaaa gcacaattca gtattaatct cacggataaa tggataattc aaatcgcata
    27901 tggtaaatta ataataatgg ctaaaaataa tggcgataca tattttagag ttcaaactat
    27961 tgaaaagcca ggtaattata tttttaacaa atatcgatta gagatacatt ctaatttacc
    28021 aaaatgttta tttccgctta cagtgagaac acgacaaagt ggcgatacat ttaaactgaa
    28081 tgggcgcgat ggttataaga aagtgaatcg cctgtttata gattgtaaag tgcaacagtg
    28141 ggttcgggat caaatgccaa ttgtattgga taaacaacag cgcattattg cggtaggaga
    28201 tttatatcaa caacaaacaa taaaacaatg gattataatt agtaaaaatg gagatgaata
    28261 gcgttatgca taatgatttg aaagaagtat tgttaactga agaagatatt caaaatatct
    28321 gtaaggaatt gggagcacaa ttaacaaagg attatcaagg taaaccatta gtatgcgtgg
    28381 gtatcttaaa aggctcagca atgtttatgt cagatttaat taaacgaatt gatacccatt
    28441 tatcaattga tttcatggat gtttctagtt atcacggagg cactgagtca actggtgaag
    28501 ttcaaatcat taaagattta ggttcttcta ttgaaaataa agacgtatta attattgaag
    28561 atatcttaga gactggtact acacttaagt caattactga attattacaa tctagaaaag
    28621 ttaattcatt agaaatagtt actttattag ataaaccaaa ccgtcgtaaa gcggacattg
    28681 aagctaagta tgtaggtaaa aaaataccag atgaatttgt tgttggttac ggtttagatt
    28741 atcgtgaatt ataccgaaac ttaccatata tcggtacgtt aaaacctgaa gtgtattcaa
    28801 attaattttt taatcaattt cagttattat tactatgcgt ttgagaaata atagtgtaga
    28861 ctcaaaaata tgaaaaatgt atttcatata tatttaattt tagacaagac atatgtcttg
    28921 aaaagttgaa aaatatagag attgataaaa ctaatacgga tgtgaatgac attgatgtta
    28981 agctcaatta ctagcttata aaacatgtca tatgttacaa tttttgttag ttttattatg
    29041 ggaagtagga ggaaatgacg catgcagaaa gcttttcgca atgtgctagt tatcgtaata
    29101 ataggcgtta ttatttttgg tctattttca tatttaaacg gtaatggaaa tatgccgaaa
    29161 cagcttacat ataatcaatt tactgagaag ttggaaaaag gtgaccttaa aactttagaa
    29221 atccaaccac aacaaaatgt ctatatggta agtggtaaaa cgaaaaatga tgaagactat
    29281 tcatcaacta ttttatataa caacgaaaaa gaattacaaa aaattactga tgctgctaaa
    29341 aagcaaaacg gtgtaaaatt aacgattaaa gaagaagaaa aacaaagtgt ctttgtgagt
    29401 atactttcaa cattaattcc agttgtagtc atagcgttat tatttatttt cttcctaagc
    29461 caagcacaag gtggcggtag tggcggtcgt atgatgaact ttggtaaatc taaagcaaaa
    29521 atgtacgata ataataaacg tcgtgttcgt ttctctgatg tagcaggggc agatgaagaa
    29581 aaacaagaat taattgaaat tgttgatttc ttgaaagata ataaaaaatt caaagaaatg
    29641 ggatctagga ttcctaaagg tgtcttactt gttggacctc caggtactgg taaaacatta
    29701 cttgctagag cggttgcagg tgaagctggc gcaccattct tctctattag tggttcagac
    29761 tttgtagaga tgtttgttgg tgttggtgcg agccgtgttc gtgacttatt cgataatgct
    29821 aagaaaaacg cgccttgtat tatctttatc gatgagattg atgctgttgg tcgtcaacgt
    29881 ggtgcaggtg ttggtggcgg tcatgatgaa cgtgaacaaa ccctaaacca attattagtt
    29941 gaaatggatg gtttcggtga aaatgaaggt atcattatga tagctgctac aaaccgtcct
    30001 gatatccttg acccagcctt attacgtcca ggtcgttttg atagacaaat tcaagttggt
    30061 cgtccagatg tgaaaggccg tgaagcaatt cttcatgttc atgctaaaaa caaaccactt
    30121 gatgaaacgg ttgatttaaa agcaatttca caacgtacac ctggtttctc aggtgctgat
    30181 ttagagaact tattaaatga agcatcttta attgctgtac gtgaaggtaa aaagaaaatt
    30241 gacatgagag atatcgaaga ggcaacggat agagttatag ccggacctgc taagaaatct
    30301 cgagttattt ctaagaaaga acgtaatatt gttgctcatc acgaagctgg tcatacaatt
    30361 atcggtatgg tacttgatga ggcagaagta gtgcataaag ttactattgt tccacgtgga
    30421 caagcaggtg gttatgcaat gatgctacct aaacaagatc gtttcttaat gactgaacaa
    30481 gagttattag ataaaatctg tggtttactt ggtggacgtg tatcagaaga tattaacttt
    30541 aacgaagtat caacaggtgc ttcaaatgac ttcgaacgtg caacacaaat cgcacgctca
    30601 atggttacgc aatatggtat gagtaaaaaa ttaggaccat tacagttcgg tcatagcaat
    30661 ggtcaagtat tcttaggtaa agatatgcaa ggtgagccta attattcaag ccaaatcgca
    30721 tatgaaattg ataaagaagt tcaacgaatc gttaaagaac aatacgaacg ttgtaaacaa
    30781 attttattag agcacaaaga acaattaatt ttaattgctg aaacattatt aacagaagaa
    30841 acattagttg ctgaacaaat tcaatcatta ttctacgaag gtaaattacc tgaaattgat
    30901 tatgatgcag ctaaagttgt taaagatgaa gattctgaat ttaatgatgg taaattcggt
    30961 aaatcttatg aagagattcg taaagagcaa ttagaagatg gacaacgtga cgaaagtgaa
    31021 gatcgtaaag aagaaaaaga tattgctgag gataaaaaag aagctgataa atctgatgaa
    31081 aaagatgaac cagcacatcg acaagcccca aatatcgaaa aaccttacga tccaaatcac
    31141 ccagacaata aataatcgat tatatacagt acctctttct atgataaagt tatagaaagg
    31201 ggtactttta tcgtttttga aaatacgtat tagattttaa gtcgttgaat tgttatagca
    31261 gaaaataatt gtaaaacaag ttacttcatt atttagaatg atgggtgtag aataagaaca
    31321 attgttgcat tttatgaagt aaagtaattt tttaaatata gagtaataga ggagattgaa
    31381 ataatgacac acgattatat tgttaaagca ttagcatttg atggagagat tagggcttat
    31441 gctgctttga caactgaaac tgttcaagaa gcacaaacga gacattatac atggccgaca
    31501 gcatctgctg caatgggaag aacaatgaca gcaacagcta tgatgggcgc aatgttgaaa
    31561 ggtgatcaaa aattaactgt cactgtagat ggccaaggac ctattggacg aattattgcc
    31621 gatgcaaatg ctaaaggcga ggtgcgtgct tatgtagacc atccacaaac tcattttcca
    31681 ttaaatgagc aaggtaaact tgatgtaaga cgagcagtag ggacaaatgg atctattatg
    31741 gttgttaaag acgttggaat gaaagactat ttctctggag caagtccaat tgtttcagga
    31801 gaacttggtg aagattttac ttattattat gctacaagtg aacaaacacc ttcatcggta
    31861 ggtcttggtg tattggtaaa tcctgataat acgattaaag cagcaggagg atttatcatt
    31921 caagttatgc caggtgccaa agatgaaaca atttcaaaat tagaaaaagc aattagtgaa
    31981 atgacaccag tttctaaatt aattgaacaa ggattaacgc cagaaggatt actaaacgaa
    32041 atcttaggtg aagaccatgt gcaaatttta gagaaaatgc ctgttcaatt tgaatgtaat
    32101 tgtagtcatg agaaattttt aaatgctatt aaaggattgg gcgaggctga gattcaaaat
    32161 atgattaaag aagatcatgg tgctgaagca gtatgtcatt tctgtggaaa taaatataaa
    32221 tatactgaag aagaattaaa cgtgttgcta gaaagtttag cgtaatttaa tttaaatcaa
    32281 tacgctaaaa tgtttatttt tagcggttta gtgaaatgta gaactaaata gttgtataat
    32341 ccttagtaat tttgtttgct ttctagaatt tatttgataa aataattcta tatccgataa
    32401 ataaactaag atttcaacaa ctaactaaaa aggagtgttc ttaatggcac aaaaaccagt
    32461 agataatatt actcaaatta ttggcgatac accggtagtc aaattgagaa atgtagtaga
    32521 tgacaatgca gcagatgttt atgtaaaatt ggaatatcaa aatccaggtg gttctgtaaa
    32581 ggatagaatt gctttagcaa tgattgaaaa agcagagcga gaaggcaaaa ttaaacctgg
    32641 cgatacaatt gtagaaccaa ctagtggtaa tacgggtatc ggtttagcat ttgtatgtgc
    32701 tgctaaagga tataaagcag tatttactat gcctgaaaca atgagccaag agcgtcgtaa
    32761 tttattaaaa gcatacggtg cggaattagt tttaacgcct ggatcagaag cgatgaaagg
    32821 tgcaattaaa aaagctaaag aattaaaaga agaacatggt tacttcgagc cacaacaatt
    32881 tgaaaaccct gcgaaccctg aagttcatga gttaactaca ggtcctgagt tattacaaca
    32941 atttgaaggg aaaactatcg atgcgttcct agctggtgtt ggtactggtg gtacgttatc
    33001 tggtgtaggt aaagttctga aaaaagaata tcctaacatc gaaattgttg ctatagagcc
    33061 tgaggcttct ccagtattga gcggtggtga gccaggtcca cataaattac aaggtttagg
    33121 tgctggattt attccaggca ctttgaatac agaaatctat gacagtatta ttaaagtagg
    33181 aaatgataca gcgatggaaa tgtctcgtcg agttgctaaa gaggaaggta ttttagcagg
    33241 tatttcatca ggtgctgcga tttatgctgc cattcaaaaa gcaaaagaat taggaaaagg
    33301 taaaacagta gtaacagtat tgccgagtaa tggtgaacgc tacttatcaa cacctttata
    33361 ttcattcgat gactaattaa tgtcatttaa aagagtgagt tatctttttg agataacttg
    33421 ctcttttttt ctaccatgta taattttaaa aatatgagcg ttaaattaaa catttttctg
    33481 ataaaaacat ccagtgaatg ataagataat aaacgtacat actaataact agtaaatcgc
    33541 aggagtaaat tttattagag ttaaacaata cataattaaa gggtggttaa catgactaaa
    33601 acaaaaatta tgggcatatt aaacgtcaca cctgattcat tctcagatgg tggaaaattt
    33661 aataatgttg aatcagcagt aactagagtg aaagcgatga tggatgaagg tgctgacatt
    33721 atagatgttg gaggtgtttc aacgagaccc ggccatgaaa tggtttcatt agaagaagag
    33781 ctgaacagag tattacctgt tgttgaagct attgtcggtt ttgatgtgaa aatttcagtc
    33841 gatacatttc gaagtgaggt tgctgaagca tgtttaaaat taggcgttga tatcattaat
    33901 gatcaatggg cggggctgta tgatcatcat atgttccaaa ttgtagctaa atatgacgcg
    33961 gaaattattt taatgcataa tggaaatggt aatcgtgatg aaccggttgt cgaagaaatg
    34021 ttaacatctt tgttagcaca agcacatcaa gctaaaatag ctggtatacc ttcaaataaa
    34081 atttggctag atccaggtat aggtttcgct aaaactagaa atgaagaagc cgaagttatg
    34141 gcaagactgg atgaacttgt tgcaacagaa tatccagttt tattagcgac aagccggaaa
    34201 cgtttcacta aagagatgat gggttatgat acaacaccgg ttgaaagaga tgaagtaact
    34261 gcagctacga ctgcatatgg tattatgaaa ggcgttagag cagtacgcgt tcataatgtc
    34321 gagttgaatg ctaaattagc taaaggtata gattttttaa aggagaatga aaatgcaaga
    34381 cacaatcttt cttaaaggta tgcgctttta tggatatcat ggtgctttat cagctgaaaa
    34441 tgaaataggg caaattttca aagtggatgt aactttgaaa gtagacttag ctgaagctgg
    34501 gcgtactgat aatgttattg atacagttca ttatggtgaa gtgttcgaag aggttaaatc
    34561 aattatggaa ggtaaggccg ttaatttact tgagcatcta gctgaacgta ttgcaaatcg
    34621 tataaattca caatataatc gtgtaatgga aacgaaagtg agaatcacta aagaaaaccc
    34681 accgattccg ggtcattatg atggagtagg tatcgaaata gtgagggaga ataaatgatt
    34741 caagcatact taggattagg tagtaatatt ggtgatagag aaagccagtt aaacgatgct
    34801 ataaagattt tgaatgaata tgatggtatt aacgtatcta atatttctcc gatttatgaa
    34861 acagcaccag ttgggtatac tgagcaacct aactttttaa atttgtgtgt tgaaattcaa
    34921 acaacactca cagtattaca actgttggaa tgttgtttga agacagaaga atgtttacac
    34981 cgtgttagaa aggaacgatg gggtcctaga actttagatg tggatatttt gttgtatgga
    35041 gaagaaatga tagatttacc aaaactgtcg gtgccacatc cgagaatgaa tgaacgtgca
    35101 tttgttttaa tcccattaaa tgatatagca gcaaatgtca tagaaccacg ttcgaaattg
    35161 aaagtgaaag atttagtttt tgtcgatgac agtgtaaaga gatataaata atgtattgtt
    35221 gagaacattc atatttattg ggaatagatg attgattatt ggagatgttt ccgcattttg
    35281 attatctcta aatgcatttg atttcgaatt agtatatgat gattcagtat gtgttagaat
    35341 taagttattt cataaaatca aagtaagcaa tatttgataa attgctgtaa tgtatttggg
    35401 cttttgttga agtttgtgga agataatttt tata
//
LOCUS       DAKPJH010000016        35005 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.016, whole genome shotgun sequence.
ACCESSION   DAKPJH010000016 DAKPJH010000000
VERSION     DAKPJH010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 35005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35005
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.016"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(153..2219)
                     /locus_tag="OY092_000646"
     CDS             complement(153..2219)
                     /locus_tag="OY092_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HCX1075618.1"
                     /translation="MFKKLFGQLQRIGKALMLPVAILPAAGILLAFGNAMHNEQLVEI
                     APWLKNDIIVMISSVMEAAGQVVFDNLPLLFAVGTALGLAGGDGVAALAALVGYLIMN
                     ATMGKVLHITIDDIFSYAKGAKELSQAAKEPAHALVLGIPTLQTGVFGGIIMGALAAW
                     CYNKFYNITLPPFLGFFAGKRFVPIVTSVVAIATGVVLSFAWPPIQDGLNSLSNFLLN
                     KNLTLTTFIFGIIERSLIPFGLHHIFYSPFWFEFGSYTNHAGELVRGDQRIWMAQLKD
                     GVPFTAGAFTTGKYPFMMFGLPAAAFAIYKNARPERKKVVGGLMLSAGLTAFLTGITE
                     PLEFSFLFVAPVLYGIHVLLAGTSFLVMHLLGVKIGMTFSGGFIDYILYGLLNWDRSH
                     ALLVIPVGIVYAIVYYFLFDFAIRKFKLKTPGREDEETEIRNSSVAKLPFDVLDAMGG
                     KENIKHLDACITRLRVEVVDKSKVDVAGIKALGASGVLEVGNNMQAIFGPKSDQIKHD
                     MAKIMSGEITKPSETTVTEEMSDEPVHVEALGTTDIYAPGVGQIIPLSEVPDQVFAGK
                     MMGDGVGFIPEKGEIVAPFDGTVKTIFPTKHAIGLESESGVEVLIHIGIDTVKLNGEG
                     FESLINVDEKVTQGQPLMKVNLAYLKSHAPSIVTPMIITNLENKELVIEDVQDADPGK
                     LIMTVK"
     gene            complement(2520..4259)
                     /locus_tag="OY092_000647"
     CDS             complement(2520..4259)
                     /locus_tag="OY092_000647"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HCX1075619.1"
                     /translation="MAKIKANEALVKALQAWDIDHLYGIPGDSIDAVVDSLRTVRDQF
                     KFYHVRHEEVASLAAAGYTKLTGKIGVALSIGGPGLIHLLNGMYDAKMDNVPQLILSG
                     QTNSTALGTKAFQETNLQKLCEDVAIYNHQIEKGDNVFEIVNEAIRTAYEQKGVAVVI
                     CPNDLLTEKIKDTTNKPVDTSRPTVVSPKYKDIKKAVKLINKSKKPVMLIGVGAKHAK
                     DELRAFVEAAKIPVVHSLPAKTILPDDHPYSIGNLGKIGTKTSYQTMQDADLLIMVGT
                     NYPYVDYLPKKNIKAIQIDTNPKNIGHRFNINVGIVGDSKIALHQLTENIKHVAERPF
                     LNKTLERKAVWDKWMEQDKNNNSKPLRPERLMASINKFIKDDAVISADVGTATVWSTR
                     YLNLGVNNKFIISSWLGTMGCGLPGAMASKIAYPNRQAIAIAGDGAFQMVMQDFATAV
                     QYDLPLTVFVLNNKQLAFIKYEQQAAGELEYAVDFSDMDHAKFAEAAGGKGYTIKSAS
                     EVDAIVEEALAQDVPTIVDVYVDPNAAPLPGKIVNEEALGYGKWAFRSITEDKHLDLD
                     QIPPISVAAKRFL"
     gene            complement(4306..4995)
                     /locus_tag="OY092_000648"
     CDS             complement(4306..4995)
                     /locus_tag="OY092_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HCX1075620.1"
                     /translation="MNDYVQALLMILLTVVLYYFAKRLQQKYPNPFLNPALIASLGII
                     FVLLIFGISYNGYMKGGSWINHILNATVVCLAYPLYKNREKIKDNVSIIFASVLTGVM
                     LNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIEVSHELGGTDTMTVLFIITTGLIG
                     SILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGAFSSIGMILTAVISS
                     VLIPVLILLFY"
     gene            complement(4988..5383)
                     /gene="cidA"
                     /locus_tag="OY092_000649"
     CDS             complement(4988..5383)
                     /gene="cidA"
                     /locus_tag="OY092_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin-like murein hydrolase modulator CidA"
                     /protein_id="HCX1075621.1"
                     /translation="MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFL
                     FYLLLQFKIVPLTWVEDGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIG
                     TCIVALSSGYIAEKMSVKHKHRKGVDAYE"
     gene            complement(5596..6474)
                     /locus_tag="OY092_000650"
     CDS             complement(5596..6474)
                     /locus_tag="OY092_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000351767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1075622.1"
                     /translation="MDIKHMKYFIEVVKQGGMTNASKSLYIAQPTISKAIKDIENEMG
                     TPLFDRSKRHLILTDAGQIFYEKSKEIVALYDYLPSEMERLNGLETGHINMGMSAVMN
                     MKILINILGAFHQQYPNVTYNLIENGGKTIEQQIINDEVDIGVTTLPVDHHIFDYTTL
                     DKEDLRLIVSREHRLAKYETVKLEDLAGEDFILFNKDFYLNDKIIENAKNVGFVPNTV
                     AQISQWHVIEDLVTNELGISILPTSISEQLNGDVKLLRIEDAHVHWELGVVWKKDKQL
                     SHATTKWIEFLKDRLG"
     gene            6641..6859
                     /locus_tag="OY092_000651"
     CDS             6641..6859
                     /locus_tag="OY092_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HCX1075623.1"
                     /translation="MSFYEFMQSFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYF
                     RTNPCPESISVPVIKRALSVFNQFTNVQ"
     gene            7248..7679
                     /locus_tag="OY092_000652"
     CDS             7248..7679
                     /locus_tag="OY092_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1075624.1"
                     /translation="MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQ
                     CTWWAFKRRAQVGKPVSNKWGNAKNWYNNARKSKYATGRTPRKFAVMQSTAGYYGHVA
                     VVEQVYKNGSIKVSEYNFYRPLKYNTRVLSKKAARNFNYIY"
     gene            complement(7818..9095)
                     /locus_tag="OY092_000653"
     CDS             complement(7818..9095)
                     /locus_tag="OY092_000653"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HCX1075625.1"
                     /translation="MQNLDKNFRHLSRKEKLQQLVDKQWLSEEQFDILLNHPLIDEEV
                     ANSLIENVIAQGALPVGLLPNIIVDDKAYVVPMMVEEPSVVAAASYGAKLVNQTGGFK
                     TVSSERIMIGQIVFDGVDDTEKLSADIKALEKQIHKIADEAYPSIKARGGGYQRIAID
                     TFPEQQLLSLKVFVDTKDAMGANMLNTILEAITAFLKNEFPQSDILMSILSNHATASV
                     VKVQGEIDVKDLARGERTGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLAT
                     GNDTRGAEASAHAYASRDGQYRGIATWRYDQDRQRLIGTIEVPMTLAIVGGGTKVLPI
                     AKASLELLNVESAQELGHVVAAVGLAQNFAACRALVSEGIQQGHMSLQYKSLAIVVGA
                     KGDEIAKVAEALKQEPRANTQAAERILQEIRQQ"
     gene            9349..10515
                     /locus_tag="OY092_000654"
     CDS             9349..10515
                     /locus_tag="OY092_000654"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HCX1075626.1"
                     /translation="MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAV
                     SPVNQDIVSMGANAAKDIITDEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA
                     RCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAM
                     VIAHNPSILALNQDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAK
                     RQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNI
                     YTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKAL
                     LNNRTEVSVDAYETFFKRFDDVDFDEEQDAVHEDRHIFYLSNIENNVREYHRPE"
     gene            complement(10686..11207)
                     /locus_tag="OY092_000655"
     CDS             complement(10686..11207)
                     /locus_tag="OY092_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HCX1075627.1"
                     /translation="MVYKSYYDSPVGRLELLSDGVSLTAVLFENQQGDGNREENTSLA
                     IFKEATQWLDAYFKGDNPEITIPLKPTGSDFQQCVWNELRQIPYGTLTTYGAIAKKVG
                     KVLDKPKMSAQAVGGAVGSNPLSIIVPCHRVVGKTGSLTGFGGTINNKIKLLELENID
                     MSKLYVPKHSTKP"
     gene            11570..13687
                     /gene="clpL"
                     /locus_tag="OY092_000656"
     CDS             11570..13687
                     /gene="clpL"
                     /locus_tag="OY092_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001058986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpL"
                     /protein_id="HCX1075628.1"
                     /translation="MNNNFFNSDFDSILRRMMQDMQSSNQTSNKKYYINGKEVSPEEL
                     AQFTQQGGNHSAEQSAQAFQQAALRQQGQQGQQGGNGNYLEQIGRNLTQEARDGLLDP
                     VIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEI
                     ISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSK
                     GLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDTVEILK
                     GIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAID
                     KVATEKRISELEHDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDIS
                     DTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGN
                     RPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGY
                     VGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFK
                     NTIIICTSNAGFGNGTDQEYDDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVN
                     LLLDDVQVTLDKKGITMNVSQDAKDWLIEEGYDEDLGARPLRRIVEQQVRDKITDYYL
                     DHTDVKHVDLDIEDNELVVKGKS"
     gene            complement(13754..13924)
                     /locus_tag="OY092_000657"
     CDS             complement(13754..13924)
                     /locus_tag="OY092_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HCX1075629.1"
                     /translation="MSVIINILIFLAIFGYALYTLVKFFKRSKQGKCGTCDIDRDCCG
                     TEQHTANHFPGK"
     gene            complement(13937..15931)
                     /gene="feoB"
                     /locus_tag="OY092_000658"
     CDS             complement(13937..15931)
                     /gene="feoB"
                     /locus_tag="OY092_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HCX1075630.1"
                     /translation="MENYCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGKLK
                     ENVGQLIDLPGTYDLSPISKDETVVTDYLLNDSFSGIINIVDASQLKRNMQLTVQLLE
                     LNQPIYIGLNMIDVATKRGIKIDYHKLMKKLKTPIFPVVARTGKGTKHLLGEIKHLGE
                     GYQPHFKINYGEKIEETIKNMCQIIMTETSHDKYQARFIAIQFLLNNMQIANELNSEV
                     VNKLSSLRDQVAKQVEAVSVRREMERIRNHYIETLLQDVVTYPDEDKQYFSSRIDKIL
                     THKYIGMPIFLAIMWLIFQTTFTWIGTPLSDQLDAFIGGTFTDSVKTIMNYLGVIPFL
                     QDLITDGIIAGVGSVLVFVPQIVVLFFFISLLEDSGYMARIAVLMDRIMESFGLSGKS
                     FIPMIIGFGCNVPSIMAARSIENEKERLTTILIAPFMSCSARLPVYALFVGIFFKENQ
                     SLVVLSLYVLGIIMAFLVSTVLTKTVLKNDNAIFIVELPTYRVPSIKTLWRSTWEKAK
                     GFVRKAGTFIFGGSVVIWLLSYVGPHGINVNINQSFLHMVGSFFGMLVQPLGFGTWQA
                     GATLVPGFLAKEVIVSSMAIIYSSGDAGLVNVIQNQFTPLSAYAFMIFILLYIPCVST
                     VAAIRKETYSWKWTALAVAYPLVTAYVLTFIFYQVGHLFV"
     gene            complement(15943..16170)
                     /locus_tag="OY092_000659"
     CDS             complement(15943..16170)
                     /locus_tag="OY092_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HCX1075631.1"
                     /translation="MLNIKNGEMNKAYKIKRMDIANENMLYRLSAFGLTDDAIITIKQ
                     KCLFKGPCIIEVNGQQLSIRHCDACSIALEE"
     gene            complement(16386..18875)
                     /gene="farE"
                     /locus_tag="OY092_000660"
     CDS             complement(16386..18875)
                     /gene="farE"
                     /locus_tag="OY092_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux MMPL transporter FarE"
                     /protein_id="HCX1075632.1"
                     /translation="MAKFLYKMGTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDND
                     IKMTGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQPNITKDIKKTLDDIKK
                     DDKHIDKISDPYENKQISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNV
                     QTELTGTGMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGII
                     SLLTYAFDIPNVTLTLAVMIGLAVGIDYALFILFRYRQVMKTETDYVKGIGLAVGTAG
                     SAVIFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVVFAVLSALTLLPALISIFHKRI
                     KVNKLQSKFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPA
                     DSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDI
                     VTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRDYHRDAQDKYGFKTEISGQSVI
                     NIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLV
                     MQDGFMKGLFGIETTGPILAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYS
                     IKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIP
                     ALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAKDSKETYDTTFKVY
                     PQGATNVSKYQDVHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYDALIDYQNKHQL
                     NSKQQVTNIEQLNKNIEKLNQLLEKNLRNKS"
     gene            19020..19568
                     /gene="farR"
                     /locus_tag="OY092_000661"
     CDS             19020..19568
                     /gene="farR"
                     /locus_tag="OY092_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux pump transcriptional regulator
                     FarR"
                     /protein_id="HCX1075633.1"
                     /translation="MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHR
                     TTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHPFQTISDTINNKEDLRDIAEFQ
                     EEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSHIPDNLIFYIYDSLIEGFMHWIKDE
                     KIDWPGEEIDKIFHKIINIKIK"
     gene            complement(19645..19812)
                     /locus_tag="OY092_000662"
     CDS             complement(19645..19812)
                     /locus_tag="OY092_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075634.1"
                     /translation="MRYVISIIMAIVLAIWSLKQLSQSHLDSGFIFFFIVYVLCISYF
                     NSDKHDKNKKR"
     gene            complement(19924..21468)
                     /gene="pruA"
                     /locus_tag="OY092_000663"
     CDS             complement(19924..21468)
                     /gene="pruA"
                     /locus_tag="OY092_000663"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HCX1075635.1"
                     /translation="MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGE
                     KIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELML
                     RVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDR
                     EGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLM
                     EILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEG
                     QNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYD
                     EVLEKSIKLTKELTLGNTVDNTYMGPVINKKQFDKIKNYIEIGKEEGKLEQGGGTDDS
                     KGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITN
                     NREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTGSPDYLLHFLEQK
                     VVSEMF"
     gene            complement(21658..22257)
                     /locus_tag="OY092_000664"
     CDS             complement(21658..22257)
                     /locus_tag="OY092_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HCX1075636.1"
                     /translation="MTEKEKMLAEKWYDANFDQDLINERARAKDICFELNHTRPSDTI
                     KRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVF
                     IGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAG
                     SVVTKDIPPHSLAVGNPCKVVRKIDNDLPSETLNDETIK"
     gene            22496..22687
                     /gene="cwrA"
                     /locus_tag="OY092_000665"
     CDS             22496..22687
                     /gene="cwrA"
                     /locus_tag="OY092_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall inhibition responsive protein CwrA"
                     /protein_id="HCX1075637.1"
                     /translation="MRILITGTVAILIILGLVKTIQDYEMTNDTSRQMSDNKDDDKVI
                     HLNNFKNLHAKEFNPSDFF"
     gene            22927..25335
                     /locus_tag="OY092_000666"
     CDS             22927..25335
                     /locus_tag="OY092_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HCX1075638.1"
                     /translation="MANTKKTTLDITGMTCAACSNRIEKKLNKLDDVNAQVNLTTEKA
                     TVEYNPDQHDVQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQN
                     ATVNLTTEQAKVDYYPEETDADKLVTRIQKLGYDASIKDNNKDQTSRKAEALQHKLIK
                     LIISAILSLPLLMLMFVHLFNMHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLR
                     NGGANMDVLVAVGTSAAYFYSIYEMVRWLNGSTTQPHLYFETSAVLITLILFGKYLEA
                     RAKSQTTNALGELLSLQAKEARILKDGNEVMIPLNEVHVGDTLIVKPGEKIPVDGKII
                     KGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVE
                     EAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITLVTPGTFEPALVASISVLVIA
                     CPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHLIDTIVLDKTGTITNGRPVVT
                     NYHGDNQTLQLLATAEKDSEHPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDH
                     HHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDH
                     AKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQG
                     KKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKAT
                     IRNIRQNLFWAFGYNIAGIPIAALGLLAPWVAGAAMALSSVSVVTNALRLKKMRLEPR
                     RKDA"
     gene            25615..25821
                     /gene="copZ"
                     /locus_tag="OY092_000667"
     CDS             25615..25821
                     /gene="copZ"
                     /locus_tag="OY092_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone CopZ"
                     /protein_id="HCX1075639.1"
                     /translation="MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSV
                     QYDDSKVAVSQMKDAIEDQGYDVV"
     gene            complement(25911..26909)
                     /locus_tag="OY092_000668"
     CDS             complement(25911..26909)
                     /locus_tag="OY092_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCX1075640.1"
                     /translation="MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVA
                     GYDGLSLSQQIPLSEHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYS
                     PNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRV
                     VADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLF
                     NAELFKHFKKGAVFVNCARGSLVDTKALLEALDNGVIKGAALDTYEFERKLFPSDQRG
                     KTLNDPLLESLIDREDVILTPHIAFYTEAAVENLIVDALDATLDVLQTGDTRLRVN"
     gene            complement(26932..28086)
                     /locus_tag="OY092_000669"
     CDS             complement(26932..28086)
                     /locus_tag="OY092_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCX1075641.1"
                     /translation="MISNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQG
                     IIDHFQQALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGL
                     VAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID
                     KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKDTYTKIVHDFAYGAFGFDAKNPSILAS
                     ENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIY
                     ALNHYDDFLEEQSNIFKARRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQ
                     FLVKEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYLYE"
     gene            complement(28513..30021)
                     /locus_tag="OY092_000670"
     CDS             complement(28513..30021)
                     /locus_tag="OY092_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075642.1"
                     /translation="MKIAVIGAGVTGLAAAARIASQGHEVTIFEKNTNVGGRMNQLKK
                     DGFTFDMGPTIVMMPDVYKDVFTMCGKNYEDYIELRQLRYIYDVYFDRDDRITVPTDL
                     AELQHMLESIEPGSTHGFMSFLTDVYKKYEIARRYFLERTYRKPSDFYNMTSLVQGAK
                     LKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGPSLYSIIPMIEMMFGVHFIK
                     GGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKFDKILCTA
                     DFPSVAESLMPDFAPIKKYPPHKIADLDYSCSAFLMYIGIDIDVTDQVRLHNVIFSDD
                     FRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGSGIDWSD
                     EALTQQIKEIIYRKLAAIEVFEDIKSHIVSETIFTPNDFEQTYHAKFGSAFGLMPTLA
                     QSNYYRPQNVSRDYKDLYFAGASTHPGAGVPIVLTSAKITVDEMIKDIERGV"
     gene            complement(30033..30896)
                     /locus_tag="OY092_000671"
     CDS             complement(30033..30896)
                     /locus_tag="OY092_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HCX1075643.1"
                     /translation="MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVC
                     RKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQ
                     SFYNLIDTVYKDQQFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRL
                     GESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAI
                     AEKDFRDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANYTLHERVFVDKRKKAKL
                     FHEINSKYHRI"
     gene            complement(30933..32060)
                     /gene="crtQ"
                     /locus_tag="OY092_000672"
     CDS             complement(30933..32060)
                     /gene="crtQ"
                     /locus_tag="OY092_000672"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,4'-diaponeurosporenoate glycosyltransferase"
                     /protein_id="HCX1075644.1"
                     /translation="MKWLSRILTVIVTMSMACGALIFNRRHQLKAKTLNFNHKSLTII
                     IPARNEEKRIGHLLHSIIQQQVPVDVIVMNDGSTDETARVARSYGATVVDVVDDADGK
                     WYGKSHACYQGVTHACTNRIAFVDADVTFLRKDAVETLINQYQLQDEKGLLSVQPYHI
                     TKRFYEGFSAIFNLMTVVGMNVFSTLDDGRTNQHAFGPVTLTNKEDYYATGGHKSANR
                     HIIEGFALGSAYTSQSLPVTVYEGFPFVAFRMYQEGFQSLQEGWTKHLSTGADGTKPK
                     IMAAIVLWLFGSIASILGLCLSLKYRQMSVGKMLTVYLSYTTQFIHLHRRVGQFSNLL
                     MVCHPLLFMFFTKIFIQSWKQTHRYGVVEWKGRQYSISKEQ"
     gene            complement(32066..33559)
                     /locus_tag="OY092_000673"
     CDS             complement(32066..33559)
                     /locus_tag="OY092_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCX1075645.1"
                     /translation="MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRH
                     ESDGFGFDLGPSILTMPYIFEKIFEYSNKQMSDYVTIKRLPHQWRSFFPDGTTIDLYE
                     GIKETGQHNVILSKQDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNA
                     LINYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLW
                     YVEGGIHHLANALEKLAREEGVTIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIIS
                     NMEVIPTYKYLIHLDTQRLNKLEREFEPASSGYVMHLGVACQYPQLAHHNFFFTENAY
                     LNYQQVFHEKVLPDDPNIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYA
                     KFRDKILDKLEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFK
                     FPKESQYFENLYFVGGSVNPGGGMPMVTLSGQQVADKINAREAKNRK"
     gene            complement(33552..34040)
                     /gene="crtO"
                     /locus_tag="OY092_000674"
     CDS             complement(33552..34040)
                     /gene="crtO"
                     /locus_tag="OY092_000674"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl-4,4'-diaponeurosporenoate
                     acyltransferase"
                     /protein_id="HCX1075646.1"
                     /translation="MKKYIKTAFFCSMYWLIVQLNIANLGTRIPDKYFRQKHIIFKSF
                     NFEKHGKFWNKWFYVRKWKHKILDGHQLNQNIYDQRHLMTINTDEIEKMIIETKRTEL
                     IHWISILPVIIFNKGPRLVKYINIFYAMITNVPIIIVQRYNRPRLTQLLRILKRRGER
                     HD"
     gene            complement(34215..34982)
                     /locus_tag="OY092_000675"
     CDS             complement(34215..34982)
                     /locus_tag="OY092_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1075647.1"
                     /translation="MKKIVTATIATAGLATIAFAGHDAQAAEQNNNGYNSNDAQSYSY
                     TYTIDAQGNYHYTWTGNWNPSQLTQNNTYYYNNYNTYSYNNASYNNYYNHSYQYNNYT
                     NNSQTATNNYYTGGSGASYSTTSNNVHVTTTAAPSSNGRSISNGYASGSNLYTSGQCT
                     YYVFDRVGGKIGSTWGNASNWASAAASSGYTVNNTPKAGAIMQTTQGYYGHVAYVEGV
                     NSNGSVRVSEMNYGHGAGVVTSRTISANQAGSYNFIH"
BASE COUNT        11164 a         6759 c         5387 g        11695 t
ORIGIN      
        1 aataattaat agaaatcagc ttttttacat tgcctaagaa cttaatgtct caagctcttt
       61 tgtaacgtat tctgtttcaa ctcgctactt cgcatacgca ctacgaatga caaaaagttc
      121 attcatttga tatgctgttt aatttttaat cattatttga ctgtcataat tagcttacct
      181 ggatcagcat cttgtacatc ttcaatgaca agttctttat tttcaagatt tgtaataatc
      241 attggtgtaa cgatgcttgg tgcgtgtgat ttcaagtatg ctaaattcac tttcattaat
      301 ggttgacctt gtgttacttt ttcatcaacg ttaatcagac tttcgaatcc ttcgccattc
      361 agtttcactg tatcgatacc aatatgaata agtacttcga caccactttc agattctaat
      421 cctatcgcat gtttcgtagg gaagattgtt ttcactgtac catcaaacgg tgctacaatt
      481 tcaccttttt cagggataaa gccaacacca tcacccatca ttttaccagc gaatacttga
      541 tcaggtactt ctgataatgg aatgatttga ccgacacctg gtgcatagat atctgttgtt
      601 ccaagtgctt ctacgtgaac tggttcatct gacatttctt cagtcactgt cgtttcactt
      661 ggtttcgtaa tttcaccact cataatcttg gccatatcat gtttaatttg atctgatttt
      721 ggaccaaaga tagcttgcat attgtttcca acttctaata cacctgatgc gcctaaagct
      781 ttaatacctg ctacatctac ttttgattta tcaaccactt ctacgcgcag acgtgtaata
      841 catgcatcta aatgtttaat gttttctttt ccacccattg catctaagac atcaaatggt
      901 aattttgcga cactagagtt acgaatttca gtttcttcat cttcacgacc tggtgttttc
      961 aatttaaact tacgaattgc aaagtcgaat aagaagtaat acacgatagc atatacaata
     1021 ccgactggaa taactaataa tgcgtgtgaa cgatcccagt ttaataaacc atataaaata
     1081 taatctatga aaccacctga gaatgtcata ccaattttaa cgcctaataa atgcattact
     1141 aagaatgatg taccagctaa taatacgtga attccataaa gtactggtgc tacaaataag
     1201 aatgaaaatt ctaatggctc agtgatacca gttaaaaatg cagttaatcc tgctgataac
     1261 attaaaccac ccacgacttt tttacgttct ggtcgtgcat ttttataaat cgcaaatgct
     1321 gccgctggta aaccaaacat cataaatgga tatttaccag tagtaaatgc accagcagta
     1381 aatggtacgc catctttcaa ttgtgccatc caaatacgtt ggtcaccacg aactaattca
     1441 cctgcgtgat ttgtataact accgaattca aaccagaacg gtgaatagaa aatatgatgt
     1501 aaaccaaatg gaattaatga gcgttcaata ataccgaata taaacgttgt taatgttaaa
     1561 tttttattta ataagaaatt cgataaacta tttaatccgt cttgaattgg tggccacgca
     1621 aagcttaaaa ccacacctgt tgcaatcgct acgaccgatg tcacaatcgg tacaaatcgt
     1681 ttacctgcaa agaatcctaa aaatggtggt agtgtaatgt tataaaattt gttgtagcac
     1741 catgcggcta aagcacccat gataataccg ccaaacacac ccgtttgtaa tgttggaata
     1801 cctaatacta aggcatgtgc cggttctttc gctgcttgac ttaattcttt tgcccctttg
     1861 gcatatgaga aaatgtcatc aattgtaatg tgcaacactt tccccattgt tgcattcata
     1921 attaagtaac ctactagcgc tgctaatgct gcaacaccgt ctcctcctgc taatccaagt
     1981 gctgtaccaa ctgcaaataa taatggcaag ttatcaaata caacttgtcc tgctgcttcc
     2041 atgaccgacg aaatcattac aatgatatcg ttttttaacc atggtgcaat ttctactaat
     2101 tgttcgttgt gcattgcgtt accaaacgct aataaaatac cagctgctgg taaaatcgca
     2161 acaggtaaca ttaatgcttt accgatacgt tgcaattgtc caaacaattt cttaaacata
     2221 taaacatccc ctatctcaat ttccgcttcc atgtacaaaa aaagcaggca tgaacaaaca
     2281 agactattct catagtgcgg ttgtttgctc atgcctgcat taccagtaac acgcaagtga
     2341 tatctaattc atagctatta tacatatttg taaaagcgtt ttcaacaact ttttcacaat
     2401 tttatcatca attcagtacg atcatttgtg ataaataaac aaaacggcaa ttcccatttt
     2461 gttgaaatag aaattaccgt ttttatagtt caattcaatt gtgataacct ttaaatcagt
     2521 tataagaaac gttttgctgc cactgaaatt ggtggaattt gatctaaatc taaatgctta
     2581 tcttcagtaa ttgatctaaa tgcccactta ccataaccaa gcgcttcttc atttacaatt
     2641 ttacctggta atggcgcagc attaggatca acatatacat ctacaatcgt tggtacatct
     2701 tgtgctaatg cctcttcgac tatagcatct acttcgctag cactcttaat tgtataacct
     2761 ttaccacctg ctgcctcagc aaattttgca tgatccatat cagaaaaatc aactgcatat
     2821 tctaattcac cagctgcttg ttgttcatat ttaataaatg ctaactgttt gttattaagt
     2881 acaaatacag ttaaaggtaa atcatattgt actgctgtag cgaagtcttg cattaccatt
     2941 tggaatgcac cgtcaccagc aatggcaatc gcttgtctat ttggatatgc aatttttgat
     3001 gccatagctc ctggaagacc gcaacccatt gtacctaacc aacttgaaat gatgaacttg
     3061 ttgttcacac caagatttaa ataacgtgta gaccaaactg ttgcagtacc aacatctgct
     3121 gaaattactg catcatcttt aataaatttg ttaattgatg ccattaaacg ttctggacgt
     3181 aatggtttgc tattattatt tttatcttgt tccatccatt tatcccaaac cgctttacgt
     3241 tctaacgttt tgtttaaaaa tggtctttcc gcaacatgtt taatattttc agttaactga
     3301 tgcaatgcaa ttttactgtc tccaacaatt cctacattaa tattaaaacg atgtccgata
     3361 tttttaggat ttgtgtcgat ttggattgct ttaatatttt tcttaggtaa gtaatctaca
     3421 tatggatagt ttgtacctac cataattagt aaatctgcat cctgcattgt ctgatatgag
     3481 gtttttgtac ctattttacc taagttacca atactgtatg gatggtcatc cggtaagatt
     3541 gtcttagcag gtaatgaatg aacgaccgga atttttgccg cttcaacaaa cgcacgtagc
     3601 tcatctttcg catgttttgc accaacacca atcaacataa ccggcttttt actcttattg
     3661 attaatttaa cagctttttt aatgtcttta tattttggtg atacaacagt tggtcttgat
     3721 gtatctactg gtttattcgt tgtatcttta attttttcag ttaataagtc gttaggacaa
     3781 ataacaacag ctacaccttt ttgttcatat gccgtacgaa ttgcttcgtt aacaatttca
     3841 aacacattgt cacctttttc aatttggtga ttataaatgg ctacatcttc acataatttt
     3901 tgtaaatttg tttcttggaa tgctttcgtt ccaagtgctg tactattcgt ttgtccagat
     3961 aatattaatt gcggtacatt atccattttg gcatcataca taccatttaa taaatgaatt
     4021 aaaccagggc caccgatact taatgccaca ccgattttac cagttaattt tgtgtaacca
     4081 gcagccgcta agcttgctac ttcttcatga cgtacatgat aaaatttaaa ttgatctctc
     4141 actgtacgta aactatcgac tactgcgtcg attgagtctc ctggaatacc atacaagtga
     4201 tctatatccc atgcttgtaa tgctttaact aatgcttcat ttgcttttat ttttgccatt
     4261 attactaata gcctcccttt ctgtctatca ttttaaatat ctaaattaat agaataataa
     4321 aattagaaca ggtattaaca ctgaactaat aactgcagtt aaaatcatcc caattgaact
     4381 aaatgcaccg gattcaatat ccatttctag tgctttagct gtgccaaatg catgtgacgc
     4441 attcccatac gttaaacctt tggcgataga agattcaaat cttccaaatc ttaataacat
     4501 cgaacctaaa atactaccga ttaaacccgt tgtgataata aaaagtacgg tcatcgtatc
     4561 tgtaccacct agttcatgtg acacttcgat acctactgcg gctgttatag atcggggcaa
     4621 taacgttaca atgacgtctt tagaatagcc aaatgcttta agtgttaaga acactaacat
     4681 gaaattcagc atgacgccag ttaatacact tgcaaaaatg atagagacat tgtctttaat
     4741 tttctctcta tttttataaa gtgggtacgc taaacatacg accgttgcgt ttaaaatatg
     4801 gttgatccaa ctgccacctt tcatataccc gttataacta attccaaaga taagtaagac
     4861 aaaaataatt cctaaagatg caattaatgc tggattcaaa aatgggttcg gatatttttg
     4921 ttgtaacctt ttagcgaaat aatataaaac gacagtcaac aaaatcatta ataaggcttg
     4981 cacgtaatca ttcataagcg tctacacctt tacgatgttt atgtttaaca gacatttttt
     5041 cagcaatata acctgaagat aatgcaacga tacatgttcc tatgataatg actgcgaaaa
     5101 agagtatata atttagcgta atttcggaag caacatccat aatacctaca actgacggta
     5161 tgaagaaaaa gaccatcgtc tttaataaaa agtttgcacc gtcttctacc caagttagcg
     5221 gtacaatctt aaattgtaat agtaaataaa ataaaaatag accaacaata ctgccggcta
     5281 agggaagatg aaaaatcttt tgaatttctg tgccaatata agtaatcaca atgatgattc
     5341 ctagttgtag tagtagtttg attattaatt ggactttgtg catggcgcca tccctttcta
     5401 aatatgtcta aattgttaca ataactatta taaagatggc gtacacaata taaaaatact
     5461 ctttttttat agtttgtatt actattttct atggaaacgc tctctaaatt tcacttcatt
     5521 ttcacaaaaa aacactcatt atttcaatga cccacgtaat gatgcgcctt aaataatgag
     5581 tgctttatta atatgttagc ctaaacggtc tttcaaaaat tctatccatt tcgttgtggc
     5641 atgacttaat tgtttatcct tcttccaaac aacacctaat tcccaatgta catgagcatc
     5701 ttcaatgcgt agcagcttca catctccatt tagttgctct gaaattgatg ttggtaaaat
     5761 actaatacct aattcattcg taactaaatc ttctataaca tgccattgtg aaatttgcgc
     5821 tacagtattc ggaacaaagc caacgttttt agcattttca ataattttat cattcaagta
     5881 aaagtcttta ttaaataaaa tgaagtcttc acctgctaaa tcttcgagtt taacagtttc
     5941 atattttgcg agtcgatgct ctctgctcac gataagtcgc aaatcttcct tatctagggt
     6001 agtataatcg aaaatatgat gatcgactgg caaagtggtc acgcctatat ctacttcatc
     6061 attgataatt tgctgttcaa tcgttttgcc gccattttct attaaattat atgtaacatt
     6121 tggatattgt tgatggaatg caccaagaat attgataaga atcttcatat tcatgactgc
     6181 cgacataccc atgtttatat gccctgtttc cagtccattc aagcgttcca tttcagatgg
     6241 taaataatca tacagtgcaa caatttcttt acttttctca taaaaaattt gacctgcatc
     6301 ggtaagaatt aaatgtcttt tacttctatc aaataagggc gtgcccattt cattttcaat
     6361 atctttaatt gctttactaa ttgtaggttg tgcaatatat aatgatttgg aagcattagt
     6421 catgccccct tgcttaacga cttcaataaa atatttcata tgtttgatat ccactaacat
     6481 catcctaact atttcaacac gtttatttca ttatacacaa cttcttaaac attcaataaa
     6541 tttagattta taaaattgct ttataaaaag tttcatgtaa aatacacatt cttttatggt
     6601 attatattaa tggctcaagt ttgttattcg aggtgaggta ttgagctttt acgaatttat
     6661 gcaaagtttt cttggtgatg acacaccatt aggtgaattg gttgattgga ttaatcaaga
     6721 tagcaatttc cctagagaag tgaagagcca tagtgaaata ttgtcatatt ttcgaacaaa
     6781 tccatgtcct gaaagcatct cagtacctgt aattaaacgg gcactatcag ttttcaacca
     6841 attcacaaat gtacaatgat acatgaatac atggagtcac atcatctcat gttagcgctc
     6901 tgattgcagg gcgctatttt taatgttatc gctacattta gtatgttgtg attgctattt
     6961 tctttcagtt ataaaaccac gtaccttttc ttttaaatca tttatatttt cccactaata
     7021 tccgctgtta atcaattctg acatccttgt atcactatga caattaattg ttaaatacat
     7081 taatttctac attttatgaa aaaatccatt tttattacaa ttcaacactt tatatgacaa
     7141 cttcattaca gttactttta ttgttgattg cttgcattgt tttctaaaaa aattttgtta
     7201 tcataaataa cgttgaataa agaaaaaaat taacttggga gataaaaatg gaatataaaa
     7261 agatactaat tcgtttatta attgcttttg cagtactttt ctcagcagat ttcacttatc
     7321 aatccgtcga acaaacgcat caatcgcatg ccgcagttaa ttattatagt aaaaaccaat
     7381 gtacatggtg ggcatttaaa cgtcgcgcac aagttggcaa acctgtctct aacaaatggg
     7441 gtaatgccaa aaattggtat aacaatgcac gtaaatcaaa atatgcgact ggtcgtacac
     7501 caagaaaatt tgctgtaatg caatcaactg caggatatta tggacatgtc gcagttgttg
     7561 aacaagtata taaaaacggt agtattaaag tttcagaata caacttttat cgcccattaa
     7621 aatacaatac acgtgtacta agcaaaaagg cagcacgtaa ctttaactat atttactaat
     7681 caaaaaactt ctatcacgaa cgcttcaatt tcctgtatgc gtgtgataga agtttttatt
     7741 ttttgttcat attaatttat ttaagcgcta cgatggactg acttaaactt ttctttaaaa
     7801 ccgctattcg caatttacta ttgttgtcta atttcttgta aaatacgttc cgctgcttgt
     7861 gtatttgcac ggggttcttg cttcaatgct tcagctactt tagcaatttc atcacctttt
     7921 gctcctacaa cgatagctaa tgatttatat tgtaaactca tatgaccttg ttgaatacct
     7981 tctgacacaa gcgcgcgaca tgctgcaaag ttttgcgcta aaccaacggc agcaactaca
     8041 tgacctaatt cttgtgctga ctctacattt agtagctcta atgaagcttt agctattggt
     8101 aatactttcg taccaccccc aacaattgct aatgtcattg gcacttcaat tgtaccaatc
     8161 aatcgttgac gatcttgatc gtaacgccat gtagcaatac cacgatactg tccgtcacga
     8221 ctcgcatatg catgcgcact tgcttctgca ccacgcgtat catttcctgt tgctaaaaca
     8281 acagcatgta tgccattcat aacaccttta ttatgtgttg cagcacgatg aatatcaact
     8341 tgtgccaata cagaagcacg ttccattcgt ttggcaacct cttccccagt tctctcgccc
     8401 cttgctaaat ctttaacatc aatttcgcct tgaactttaa caacggacgc tgttgcatga
     8461 ttggataaaa tactcattaa aatatcgctt tgcggaaatt cattttttaa aaatgcagtt
     8521 atggcctcta aaatcgtatt aagcatatta gcgcccatag catctttcgt atcaacaaat
     8581 acttttaaag atagtaactg ttgctcagga aatgtatcaa tcgctatacg ttggtaacca
     8641 ccaccacgcg ctttaataga aggatatgcc tcatccgcaa ttttatgaat ttgcttttct
     8701 aaagctttaa tgtctgctga taatttttca gtatcgtcaa cgccatcaaa gacgatttga
     8761 cctatcataa tacgttcaga agataccgtt ttaaatccgc cagtctgatt cactagcttt
     8821 gcaccataac tagctgcagc gacaactgaa ggctcttcca ccatcatagg tacaacatat
     8881 gccttatcgt ccacaatgat attcggtaat aatccaacgg gtaatgcacc ttgcgcgatg
     8941 acattttcaa ttaaactatt ggctacttct tcatcgatta atggatgatt cagtaaaatg
     9001 tcgaattgtt cttctgataa ccattgctta tcaaccaatt gttgtaactt ttctttacga
     9061 gataaatgtc gaaaattctt atctaaattt tgcatggacg tactcctttt acttcacata
     9121 atttttaaca tttcaatcac tactattttt accacaaaat aacgtcattc gtcttaaaat
     9181 tcaattgaat aattgtcgtt ttgactttaa aataaaacaa ggtaaattaa aacgcttaca
     9241 agaaacgaca aatcattttt aaatttagta tatttctttg tataaaatta gcatattctg
     9301 atatgataca agtgttgctt ttataaattt gaaaggatgt aaaaccttat gacaataggt
     9361 atcgataaaa taaactttta cgttccaaag tactatgtag acatggctaa attagcagaa
     9421 gcacgccaag tagatccaaa caaattttta attggtattg gtcaaactga aatggctgtt
     9481 agtcctgtaa accaagacat cgtttcaatg ggcgctaatg ctgctaagga cattataaca
     9541 gacgaagaca aaaagaaaat tggtatggta attgtggcaa ctgaatcagc agttgatgct
     9601 gctaaagcag ccgctgttca aattcacaac ttattaggta ttcaaccttt tgcacgttgc
     9661 tttgaaatga aagaagcttg ttatgctgca acaccagcaa ttcaattagc taaagattat
     9721 ttagcaacta gaccgaatga aaaagtatta gttattgcta cagatacagc acgttatgga
     9781 ttgaattcag gcggcgagcc aacacaaggt gctggcgcag ttgcgatggt tattgcacat
     9841 aatccaagca ttttggcatt aaatcaagat gctgttgctt acactgaaga cgtttatgat
     9901 ttctggcgtc caactggaca taaatatcca ttagttgatg gtgcattatc taaagatgct
     9961 tatatccgct cattccaaca aagctggaat gaatacgcaa aacgtcaagg taagtcgcta
    10021 gctgacttcg catctctatg cttccatgtt ccatttacaa aaatgggtaa aaaggcatta
    10081 gagtcaatca ttgataacgc tgatgaaaca actcaagagc gtttacgttc aggatatgaa
    10141 gatgctgtag attataaccg ttatgtcggt aacatttata ctggatcact atatttaagc
    10201 ctaatttcat tacttgaaaa tcgtgattta caagctggtg aaacaatcgg tttattcagt
    10261 tatggctcag gttcagttgg tgaattctat agtgcgacat tagttgaagg ctacaaagat
    10321 catttagatc aggctgctca caaagcatta ttaaataacc gtactgaagt atctgttgat
    10381 gcatatgaaa cattcttcaa acgttttgat gacgtagact ttgacgaaga acaagatgct
    10441 gttcatgaag atcgccatat tttctactta tcaaatattg aaaataacgt tcgcgaatat
    10501 cacagaccag agtaatctgt gtatttgaaa gacatttaaa tataacctaa aaacagcagt
    10561 aagaccactt ctaattgaaa tcgtcttact gctgttttct atttataatg cttcgtcttg
    10621 aatgaattca ttatgcctat ttgacatatt attaaagttt tcctaatgcc tggatccttt
    10681 atacgttacg gcttcgtgct atgttttggt acataaagct ttgacatatc gatattctcc
    10741 aactctaaca gcttaatttt attattaatc gttccaccga atcctgttaa gctacccgtt
    10801 ttaccgacaa cacgatgaca tggcacgata attgataatg gattacttcc gactgcacct
    10861 ccaaccgctt gagctgacat ttttggctta tcaagcacct tgcctacttt tttggcaata
    10921 gcaccatacg ttgttaacgt cccataagga atctgtctta attcattcca aacacactgt
    10981 tgaaaatcac tacctgttgg ctttaaaggt attgtgattt caggattgtc acctttaaaa
    11041 tacgcgtcta accactgtgt cgcctcttta aatatcgcta aagacgtatt ttcttcccta
    11101 ttaccatcac cttgttgatt ttcaaacaaa acagcggtca gacttacccc atcactcaaa
    11161 agttccaatc gtccaacagg agaatcatag taactcttat ataccataaa cacacactcc
    11221 ttttgcatca tcatactatt catttaactt tatgaaaatg attaacactt tatgctttat
    11281 caagatcaac tattcacttc caaatcaaaa ttcacacaga cttccaacac aatataccat
    11341 ttcttaatta actatgtatc aacacataca tttcttaacc attgattaat atttactttt
    11401 aaattcttac ttacttcaaa aattacacaa aaagttcata aagtgcctac aatgcgccgt
    11461 ttttaaaact acaatggtgg aaaaatagaa ttgccattgt ttatagtttg catatagttt
    11521 caatgtattt tcttttactt attagtttaa aaatttagag gtgatgttta tgaataacaa
    11581 ttttttcaat agtgacttcg attctatttt acgaagaatg atgcaagaca tgcaaagctc
    11641 aaatcagact agtaacaaga aatactatat taatggtaaa gaagtttcac cggaagaatt
    11701 agcacaattt acgcaacagg gtggtaatca ttctgccgaa caaagtgcgc aagcttttca
    11761 acaagcagca ctaagacaac aaggtcaaca aggtcaacaa ggtggcaatg gcaattattt
    11821 agaacaaatt ggtcgcaatc ttacgcaaga ggctcgtgac ggattattag atccagtcat
    11881 cggtcgtgat aaagaaatcc aagagactgc agaagtctta agtagacgca ctaaaaacaa
    11941 tcctatccta gtcggagaag ctggggttgg taaaactgcg attgtcgaag gtttagcgca
    12001 agcaatcgtt gaagggaacg tacctgcagc aatcaaagat aaagaaatta tatctataga
    12061 tatttcatcg cttgaagctg gaacgcaata tcgtggcgcc tttgaagaaa acatccaaaa
    12121 gttagttgaa ggcgttaaat catcacaaaa tgctgtgctc ttctttgacg aaattcacca
    12181 aatcatcggt tccggtgcaa ctggaagtga ttccggtagt aaagggttat ctgatatttt
    12241 aaaaccagca ttaagtcgtg gtgaaatttc aattataggt gcaacgactc aagatgaata
    12301 tcgaaacaat attcttaaag atgctgcatt aacgcgcaga tttaatgaag tacttgttaa
    12361 tgaaccaagt gctaaagata ctgttgaaat tttaaaaggt attcgcgaaa aattcgaaga
    12421 acaccatcaa gtaaaattac cagatgacgt attaaaagca tgtgttgact tatcaattca
    12481 atatattcca caacgattat taccagataa agcaatcgat gtgttagata ttacagcagc
    12541 acatttatct gcacaaagcc ctgctattga taaagtcgcg actgaaaaac gtatttctga
    12601 attggaacat gataagcgta aagcggtaag tgctgaagaa tataaaaaag ctgacgacat
    12661 tcaaaatgaa atcaaatcat tacaagataa attagaaaat agtaatggtg aacatactgc
    12721 cgttgctact gttcatgata tttcagatac tattcaacga ttaactggta ttccagtttc
    12781 tcaaatggat gataacgata ttgaacgttt aaaaaatatt tctaatcgtt taagaagtaa
    12841 aatcataggt caagatcaag ctgtagaaat ggtttctcgt gcaattcgcc gtaatcgtgc
    12901 tgggtttgat gacggcaacc gtccaattgg cagtttccta tttgttggcc ctactggtgt
    12961 tggtaaaaca gagcttgcta aacaattagc aattgatcta tttggtaata aagatgcact
    13021 gattcgactt gatatgagtg aatatagtga cacaacagct gtttcaaaaa tgattggtac
    13081 aactgctggt tatgtcggtt atgatgacaa ttcaaatacg ttaactgaaa aagtacgccg
    13141 taatccatat tcagtcattc tatttgatga aatcgaaaaa gcaaatccac aaattttaac
    13201 attgttatta caagtaatgg atgatggtaa tttgactgat ggtcaaggta atgtcatcaa
    13261 ctttaaaaat acaattatta tttgtacatc aaatgctggc tttggtaacg gtacagacca
    13321 agaatacgat gacattatgc atgaaatgaa aaaattcttc cgccctgaat tccttaaccg
    13381 cttcaacggt atcgttgaat tcttacattt agataaagat gcattacaag atatcgtcaa
    13441 cttattatta gacgatgtcc aagtaacatt agataaaaaa ggtattacga tgaatgtctc
    13501 tcaagatgca aaagattggt taattgaaga aggttatgat gaagacttag gcgcacgccc
    13561 attaagacgt attgttgaac agcaagtacg tgacaaaatt acagattact atttagatca
    13621 tactgacgtt aaacatgtgg atttagatat cgaggacaat gaattagtcg tcaaaggtaa
    13681 atcatgatac tttaacatat tgcgtatcaa aaaatgagca tcaggacgcc ctcacctgtg
    13741 ctcatttttt aaattatttc ccaggaaaat gattcgctgt gtgctgttct gttccacaac
    13801 aatcacgatc aatgtcacat gtaccacatt ttccttgttt cgaacgtttg aaaaatttaa
    13861 ctaacgtata caaggcatat ccgaaaattg ctaaaaaaat taaaatgtta ataatgactg
    13921 acactttaac cactccttaa acaaataaat gtccgacttg ataaaaaatg aatgttaaga
    13981 catatgcagt gactagagga taggcaactg caagtgccgt ccatttccat gaataagtct
    14041 ctttacggat tgctgccact gtagaaacac aaggaatata caatagtata aatatcataa
    14101 atgcatacgc agatagcggt gtgaattgat tttgaatcac attaacaagg cctgcatcac
    14161 ctgatgaata gataatcgcc atcgaactta cgataacttc ttttgctaaa aatcctggca
    14221 ctaacgtagc acctgcttgc catgttccaa atccgagcgg ttgcactaac ataccaaaga
    14281 agctaccaac catatgtaaa aaactttgat tgatattcac attgatacca tgtggtccta
    14341 cataacttaa tagccaaatg actactgagc cgccaaaaat aaatgtacct gctttacgaa
    14401 caaagccctt agccttttcc caagtactac gccacaacgt tttaatggaa ggcacacggt
    14461 atgttggcaa ttccacaata aagattgcat tatcattttt caaaaccgtt ttagtaagta
    14521 ctgtactgac taaaaatgcc ataataatac ctaaaacata caagcttaat actactaaag
    14581 attgattctc tttgaaaaag atacctacga acaacgcata cactggcagt ctagcagagc
    14641 atgacatgaa tggtgcaatt aatatcgttg ttaaacgctc tttttcattt tcaatactgc
    14701 gcgcagccat aatactcggt acgttacaac caaatccgat aatcatcggt ataaaagact
    14761 tcccgcttaa accgaacgat tccataatac gatccattaa aaccgcaata cgtgccatat
    14821 aacctgaatc ttctaataaa gatataaaga aaaagagcac aacaatttgt ggtacaaaga
    14881 ctaatactga tcctacacca gcaataatgc catctgtaat taaatcttgt aaaaatggta
    14941 taacgccaag ataattcata atcgtcttca cactatccgt aaatgtacca cctataaatg
    15001 catcgagttg atccgacaaa ggtgtgccaa tccatgtaaa tgtagtttga aagatcaacc
    15061 acataatcgc tagaaagata ggcatcccta tatatttatg tgttaatatc ttgtctattc
    15121 tagagctgaa atattgctta tcttcatctg gatacgttac cacgtcttgc aataacgtct
    15181 caatataatg attgcgtata cgctccatct ctcgacgaac agatacagct tctacttgtt
    15241 tagcaacttg atcacgtaaa ctcgacaatt tatttacaac ctctgaatta agttcgtttg
    15301 caatttgcat gttatttaat aagaattgaa tcgcaataaa tctagcttga tatttatcat
    15361 gagatgtctc tgtcattatt atttgacaca tatttttaat tgtctcttca atcttctcac
    15421 cataattgat tttaaaatgc ggttgatacc cttcccctag atgctttatt tcgccaagta
    15481 aatgtttagt tcctttgcct gtacgtgcca caactggaaa aataggtgtt tttaactttt
    15541 tcatcaattt atgataatcg atttttatcc cgcgctttgt tgctacatca atcatattta
    15601 atccgatgta tattggttga ttaagttcta acaattgtac tgttaattgc atatttcttt
    15661 ttagttgact cgcatcaaca atgttaatga ttcctgaaaa tgaatcgttt aataaatagt
    15721 ctgtcactac agtttcatct ttagaaatcg gcgataaatc atatgtacct ggtaaatcaa
    15781 ttaattgtcc tacattttct ttaagctttc ctactttttt ctctaccgtt acgccactcc
    15841 agttgcctat atattcatac gaaccagtta aagcgttaaa caaagatgtt ttaccaacat
    15901 taggatttcc taaaatacaa taattttcca ttcgtccggc tcctattctt ctaatgcaat
    15961 agaacaagca tcgcaatgtc taatacttaa ctgttgtccg tttacttcaa taatacatgg
    16021 ccctttaaat aaacattttt gtttaatcgt tatgatagcg tcatctgtta acccaaaggc
    16081 acttagacga tacaacatat tctcattagc aatatccatt cgctttattt tataagcctt
    16141 attcatttca ccatttttaa tgtttaacat actatttcgc tctcctatta gaaataataa
    16201 tcattatcac ttaaaaatca taacccttaa aattgtagct cgcaatactt tatttaaata
    16261 attttcattt ttcatataaa atttgtgaca ttacaaaaat gttttatata atctcttaca
    16321 tgcaaaaaac ctccacttca aatatcattg atagacattt aaagcggagg catgtacatg
    16381 ttattttatg atttatttct taagtttttt tctaacaatt gattgagctt ttcaatattt
    16441 ttattcaact gttctatgtt cgttacttgt tgttttgaat ttagttgatg cttgttttga
    16501 taatcaatta aagcatcata taagaacaat gaacttgctg attgctgttt cacttcttgg
    16561 tacaatgcca tcgttttatc atctagtact attgaatgtg catcatcttg cccatgtaca
    16621 tcttgatatt tcgatacatt tgttgcacct tgtggatata ctttaaaggt tgtgtcgtat
    16681 gtttccttac tatctttagc ttcagattcc tgtgattcaa ccgttttata tttttcaagt
    16741 gcatgtcctt caatatcaac tcgtggaata atgcgattca accatgctgg taaataccac
    16801 gaaccttttc caaacaattt agttaatgca ggaattaaca tcattctgac tacgaaggca
    16861 tcaaagagta caccaaacgc taatgccata cccattgatt taatcatgac atcttcttgg
    16921 aatacaaacg caaagaagac actaaacatg attaatgcag ctgctacaat aacaggacca
    16981 ctttctttca atcctacttt gatagaataa tcattatccc ctgttttact atattcttca
    17041 tgaattcgcg acataaggaa gacttcgtaa tccattgcta agccgaatag tataccaatt
    17101 gtaataaccg gcaagaaggc tagaattggt cctgtcgttt ctatgccgaa taatcctttc
    17161 ataaaaccat cttgcattac taatgttgta aatcctagcg ttgccattaa tgacaagaca
    17221 aatcctaaaa ctgcttttaa cggtattaga attgaacgga agacaatcat taataagaaa
    17281 aatgccaata caacaatgac tgttgcaaat aaaggtatcg cctcatttaa ctttttagac
    17341 atatcgatat taatgacact ttgtcccgaa atctccgttt tgaacccata tttatcttgt
    17401 gcatctctat gataatctcg taaatcatgc actaaatcat ttgtgctctc tgcattaggc
    17461 ccttgcttag gtatcacgac catcaaagca taatcattat ctttactcat ttgtggcggc
    17521 gtaacgatat ctacattttt cttatcttta atatctttat acacagattg taaatcttgt
    17581 tgtaatcctt gtggatcatc ctttttatct ttcacattta tcaacatcgg aatttggcca
    17641 ttaaatcctt caccaaattt atccgagata atatcgtaag cttttttctg tgtagaatct
    17701 gctggtttaa caccgtcatc tggaatacca agtcgcatat gactaactgg tattgcagct
    17761 gctactaata tgattaaacc tagtaatact gccgcaagtg catttcctgt aataaattta
    17821 gaccatggcg tatcaatatc ttttttgaat ttagactgta atttattcac tttaatgcgt
    17881 ttatggaaaa tgcttattaa tgcaggtaat aaagttaaag cgctaagtac tgcaaaaaca
    17941 acactaattg ccgaagcaaa tcccattacc gctaagaagt caatacctac taatgataaa
    18001 ccacatactg caatcacaac tgtcacacca gcgaagatga ctgcgctacc tgctgttccc
    18061 actgcaagtc cgataccttt aacatagtct gtttcagttt tcattacttg tcgatatcta
    18121 aacaaaataa ataatgcata atcgatacca acagcgagcc caatcattac cgctaatgtc
    18181 agtgtgacat ttggtatatc aaatgcataa gttaacaagc tgataatgcc aaccccagat
    18241 gctaaaccaa tcaatgcact tataattggt aatcctgcag caatgactga accaaatgta
    18301 atcaataaca ctacaaatgc aacaatgata ccaactagtt cagaattacc gcctacttct
    18361 gtagatgtca ttcctgtacc agttaactct gtttgtacat tatgattgtc acgtaagtct
    18421 ttcaaatgac ttttaacatt atctctagag ccatctttta aagatgtttg actaacgtca
    18481 tatgtgatat ctgcaaatgc tgttgtttta tctttactaa tttgcttatt ttcataagga
    18541 tctgatattt tatcaatgtg cttgtcatct tttttaatat catctaacgt tttcttaata
    18601 tctttagtaa tgttcggttg cacaatacca tcatctttag tcgtcttaaa gacaacacgt
    18661 atttgtgcct tttcactatc ttgattaaaa tgtttttcaa tctttttatt cgtatctaac
    18721 gactctaatc ctgtcatttt aatatcattg tcaaatttcg gtgcatttgt agcaagtggt
    18781 atcaatattg cagctacaat cactatccat gcaatgaccg cggaccattt atgttttgcg
    18841 atgaatgtcc ccatcttata taaaaatttt gccaaagtat attgcctcct tttaaaatca
    18901 acgttatagt ttaactatac agtgtagatt attgtttgat tatagtatct atccccgacc
    18961 tcttaaagaa tcaattggaa aattttgtat attaaactac acacaaagga gaaatgtaga
    19021 tgaaagagac tgatttacga gttataaaga caaaaaaagc attgtcaagt agcttgctgc
    19081 aattgttaga acagcaatta ttccaaacga ttactgtcaa tcaaatttgc gacaacgcac
    19141 tcgtacaccg cacaacattt tataaacatt tttatgataa atatgatctt cttgaatatt
    19201 tatttaatca attgactaaa gactatttcg ccagagacat tagcgatcgt cttaaccacc
    19261 catttcaaac gattagcgat acaattaaca ataaagaaga tttgcgagat attgcagaat
    19321 ttcaagaaga agacgctgaa tttaataaag tattaaaaaa tgtctgcatt aaaattatgc
    19381 ataacgatat caaaaataat agagaccgta tcgatattga cagccacatc ccagataatc
    19441 tcatatttta tatttatgac tcgttgattg aaggttttat gcattggata aaagatgaaa
    19501 aaattgactg gcctggtgaa gaaattgata aaattttcca taagataata aatattaaga
    19561 ttaaatagta gatgagaggc tcataagcgt caccagcatt cataataaaa acgatagttt
    19621 acacattaat gcattcgtgt actactatcg ttttttattt ttatcgtgct tatcgctatt
    19681 aaaataactg atacacaaca cataaactat gaagaaaaaa ataaatccgc tatctaaatg
    19741 actttgactc agttgtttca atgaccaaat tgctaataca attgccatga ttattgaaat
    19801 aacgtatctc atattcttat acctatcatc cttttctaaa aatatggttg ctattactta
    19861 atttttaaag ttataaataa aaagagccaa ccgcaatgga tggcccttgt tcattatgaa
    19921 gcattagaac atttctgaaa caaccttttg ttctaagaag tgtaataagt agtctgggct
    19981 acctgtttta gcgtcagtac ctgacatttt gaaaccacca aatggatggt atccaacaac
    20041 tgctgaagta cagcctctgt taaggtataa attacctaca tcaaattcgt ttaccgcttt
    20101 aatccaatgc tcgcgattat ttgtaatcac tgcaccagtt aaaccgtaat ctgtatcatt
    20161 tgcaacctca attgcttcat caaaatcgtt aactttcaca aagccaacaa ctggaccaaa
    20221 aatttcttct tgcatgattc tatctttaga tttaagtcct gaaatgattg ttggttctac
    20281 aaagtaacct tttgaatcat cagtgccgcc accttgttct aatttacctt cttctttacc
    20341 aatctcaata taatttttaa tcttatcaaa ttgtttttta ttaataactg ggcccatata
    20401 cgtattgtct acagtattgc ccaacgttaa ttcttttgtt aatttgattg atttctctaa
    20461 tacttcgtca taaacgtctt tatgcacaat tgcacgtgaa catgcagaac atttttgacc
    20521 agagaaacca aacgctgacg ttacaatagc ttctgccgcc atatctgtat caatattttc
    20581 atcaactaca atggcatctt taccacccat ttcagcgata acacgtttca agaagttttg
    20641 accttcttga actacggcac tacgttcata aattctagta cctgtcgcac gtgatcctgt
    20701 aaatgtaacg aaatgcgtat ctttatgatc aactaagtaa tcaccaattt ctttcggatc
    20761 accaggaaca aagttaacta cgccttttgg taatcctgct tcttctaaaa tttccattaa
    20821 tttataagcg atataaggtg tatcctcagc aggtttcaat aacactgtat tacctgccac
    20881 aactggtgct aaagttgtac cagccataat cgcaaacggg aagttccacg gcggaattgt
    20941 aacacctgta ccaattgatt tatagaaata tttattgtgt tcaccttcac gatcaagtac
    21001 tggcttgcct tgagccaagt ccatcattga acgtgcatag tattcaataa aatcaatacc
    21061 ttcagctgca tcaccaactg cttcatccca tggcttacct gcttcataaa ccataattgc
    21121 tgcaatttcc gcttttcgac gacgaataat tgccgaaaca cgtaacataa gctctgcacg
    21181 atcatttgct gaccatgttt tccaagattt ataagcttcg tttgctgctt taaatgcatc
    21241 ttcaacatct tgttttgttg cctttgatgc atttgcaatt acttgtgatg tgtctgcagg
    21301 attgattgat ttaattttgt catctttgaa aatcttctct ccattaatca ctaatggtat
    21361 gtcttgacct aattcttttt ccacgtcttt caatgctttc ttaaacatat ccacattttc
    21421 ttggactgaa aaatcgtaac caggttcatt tttaaattct actaccatgt acacttaccc
    21481 cctataaatt ttgaaagtgg tttaaccctt tgatttaatg atataacatc atttaaactc
    21541 attttactat gattaaggtc agttttgcaa tcgctttcat ttttatgctt tatccctcat
    21601 tctcaagcat tttgaaattg attggttact ttttaaaatt tatatgtgtc gcaactacta
    21661 ctttatcgtt tcgtcattta atgtttcgga tggtaggtca ttatcaattt tacgaacgac
    21721 tttacaaggg tttccaaccg ctaagctgtg tggcggaata tctttagtga caacactacc
    21781 agcaccaatc acactacctt ctccaatcgt cacccctggt agcacggcta catgaccgcc
    21841 aaaccaagta ttactgccaa tatgaatggg tccggctttt tcaaaacctt catttctatg
    21901 atgaaaatta agtggatgtg tcgctgtgta gaatccacaa ttaggtccaa taaaaacatt
    21961 atcgccaatt gtaatctgtc caccatccat aaaataacaa ttggtgttta catagacatt
    22021 ttttcctagt ttaacgttcc aaccataatc tgtatcaaaa ggaatcgaaa tacttacatt
    22081 atctgttgtt gtttgaaata attgatcgat taattccttt cttttaattg tgtcactcgg
    22141 tcttgtatga tttaattcaa agcaaatatc tttcgctcgt gcacgttcat tgattaagtc
    22201 ttgatcaaag tttgcatcgt accatttttc tgctaacatt ttttcttttt cagtcattac
    22261 acctttcaac tcctaataac ttatttactt gtttaaaagt taatcaaata aacattcgcc
    22321 tatgcaacta atacgctata acattatgaa atcgtgacct tatcaccctt atctatacaa
    22381 ttctcgcatc aaatactgct aaagtagtag ataaattcaa tactacagac gcattcattt
    22441 tttaatctat taacgtacaa tgtgagtaag agaaatataa aggagtatga tagcgatgag
    22501 aatattaatt acaggcacag ttgctatctt aatcattcta ggtttagtta aaacgataca
    22561 agattacgaa atgacaaacg acacaagtcg tcagatgtca gacaacaaag atgatgataa
    22621 agtcatccat cttaataatt ttaaaaattt acatgcgaaa gaatttaacc catctgattt
    22681 cttttaagtc acctaagaat tgcaaatcca gaagtcattt aagttttacc tttcattcat
    22741 acatccttta atattaatta cgacttcttt tatatagatg ctaaatagag agattgttgt
    22801 gcaatgtttg cacggcaatc tctctttttc tttttaaaat tggtaaaagt aaaacgcaac
    22861 gattgactta tatacctata gggggtacat tagacgtgta acaatgaatc acagggaggc
    22921 aataatgtgg ctaatacgaa aaaaacaaca ttagatatca ctggtatgac ttgtgccgca
    22981 tgttcaaatc gtatcgaaaa gaaactgaat aaacttgatg acgttaatgc ccaagtgaat
    23041 ttaactacag agaaagcaac tgttgagtat aaccctgatc aacatgatgt ccaagaattt
    23101 attaatacga ttcaacattt aggttacggt gtcgctgtag aaactgtcga attagacatt
    23161 acaggtatga cttgtgctgc atgctcaagc cgtattgaaa aagtgttaaa taaaatggac
    23221 ggtgttcaaa atgcaactgt caatttaaca acagagcaag ctaaagttga ctattatcct
    23281 gaagaaacag atgctgataa acttgtcact cgcattcaaa aattaggtta tgacgcgtct
    23341 attaaagata acaataaaga tcaaacgtca cgcaaagctg aagcgctaca acataaattg
    23401 attaagctta tcatatcagc aatattatct ttaccactat taatgttaat gtttgtgcat
    23461 cttttcaata tgcatatacc agcactattt acgaatccat ggttccaatt tattttagct
    23521 acacctgtac aatttattat tggatggcaa ttttatgtag gtgcttataa aaacttaaga
    23581 aatggtggcg ccaatatgga tgtacttgtt gctgttggta caagtgcagc atatttttac
    23641 agtatttatg aaatggttcg ttggctaaat ggctcaacaa cgcaaccgca tttatacttt
    23701 gaaacaagcg ccgtactaat taccttaatc ttattcggta agtatttaga agctagagcg
    23761 aagtctcaaa caaccaatgc gcttggcgaa ttattaagtt tgcaagctaa agaagcacgc
    23821 attttaaaag atggtaatga agtgatgatt cctctaaatg aagtacatgt tggagataca
    23881 cttatcgtta aaccaggtga aaagatacct gttgatggta aaattattaa aggtatgact
    23941 gccatcgacg aatctatgtt aacaggtgaa tctatacctg ttgagaagaa tgttgatgat
    24001 actgtaattg gttcaacgat gaacaaaaac ggtactatta ctatgacagc aacaaaagtt
    24061 ggcggggaca ctgcgttggc aaatattatt aaagttgtcg aagaagctca aagttctaaa
    24121 gcgccgattc aacgattggc agatattatt tctggttatt tcgttcctat cgttgttggt
    24181 atcgcactat taacatttat cgtgtggatt actttagtta caccaggtac atttgaacct
    24241 gcacttgttg cgagtatttc cgttctcgtc attgcttgcc catgcgcatt aggacttgct
    24301 acaccaactt ctattatggt aggtactggt cgcgctgctg aaaatggtat tttatttaaa
    24361 ggtggcgagt ttgttgaacg cacacatcta attgatacca tcgttttaga taagacgggt
    24421 accattacaa atggtcgtcc agtcgtgaca aattatcatg gtgacaatca aacgctacaa
    24481 ctactcgcta ctgctgaaaa agattctgaa cacccattgg cagaagccat tgtcaattat
    24541 gcaaaagaaa agcaattaac attaactgag acaacaacat ttaaagcagt acctggccat
    24601 ggtattgaag caacgattga tcatcaccat atattggttg gtaaccgtaa attaatggct
    24661 gacaatgata ttagcttgcc taagcatatt tctgatgatt taacacatta tgaacgagat
    24721 ggcaaaacag ctatgctcat tgctgttaat tattcattaa ctggtatcat cgcagtggca
    24781 gatactgtca aagatcatgc caaagatgct ataaaacaat tgcatgatat gggcattgaa
    24841 gttgccatgt taactggcga taataaaaac actgctcaag ccattgcaaa acaagtaggc
    24901 atagatactg ttattgcaga tattttacca gaagaaaaag ctgcacaaat tgcgaaacta
    24961 cagcaacaag gtaagaaggt tgcaatggtt ggtgacggtg taaatgatgc acctgcatta
    25021 gttaaagctg atatcggtat cgccattggt acaggtacag aagttgccat tgaagcggct
    25081 gatattacta ttcttggtgg cgacttgatg cttattccta aagccattta tgcaagtaaa
    25141 gcaaccattc gtaatattcg tcaaaatcta ttttgggcat tcggctataa tattgccggt
    25201 atccctatag ctgcattggg cttacttgcg ccatgggttg ctggtgctgc aatggcacta
    25261 agttcagtaa gtgttgtcac aaacgcactt agattgaaaa agatgcgatt agaaccacgc
    25321 cgtaaagatg cctagattcc ttaataatga aggattcgtt ggtgattctg aggtagacta
    25381 gtgattggct ctataatgtc gcggtttaca gttggatctt cgctcctact gcatatatag
    25441 ttacactttt cgcttggcga attagtgtgt cttacctaat agctccgcct attaggttcc
    25501 aacattatta taaataataa gtacactatg gtttacagtt ggatcttcgc tccaactgca
    25561 taagagccac taattattat aaataataag tggctctaaa aggaggtgaa tgctatgtca
    25621 caagaaattt taaatgttga aggtatgagc tgtggtcact gcaaaagtgc tgttgaatct
    25681 gcattaaata atattgacgg tgtcacttca gctgacgtta accttgaaaa tggtcaagta
    25741 agtgttcaat atgatgacag taaagttgct gtatctcaaa tgaaagacgc aattgaagat
    25801 caaggttacg atgtcgttta attaggcaat attcaacgtc atcaacacca aattaaaaaa
    25861 tcgaactgat gagaatccca acaatccaaa ttatctcatc agttcgattt ttaatttact
    25921 cgcaacctgg tatctccagt ctgcaataca tctaatgttg catctaatgc atcgacaatt
    25981 agattttcaa ctgcagcttc agtataaaac gcaatatgtg gtgttaatat gacatcttcc
    26041 ctgtcaatca acgattctaa caatggatcg ttcagtgttt tgcccctttg atcacttggg
    26101 aaaagtttgc gttcaaattc atacgtatca agtgctgcac ctttaatcac accattgtct
    26161 aatgcttcta ataacgcctt agtatctact aaagaacctc tcgcacaatt gacaaatact
    26221 gcgccctttt taaaatgttt aaataattca gcattaaata gataatgatt atatttcgtt
    26281 gcaggtacat gtaatgtcac gatatcagca ccttcaaccg cttcctcaat cgtatctttg
    26341 taatcgacat acgttgcaat tttagcatta ggaaacgggt cgtatgcgac cacatcactt
    26401 tgataaccat tggcaaatat atcggctact acacggccaa ttcgacctgt accaataaca
    26461 gctactttta aatctttaat ggatttcgat aaaatagtag gttcccatct aaaatcatgc
    26521 tctcgcactt tcgtttgaat ttgattaaaa tgacgaacca cattaatagc ctggttcaca
    26581 gcaaactccg caattgaatt cggagagtat gacggcacat ttgacacaat caagttatac
    26641 ttgtttgcta actccaaatc atatgtatca aatccagcac ttcgttgtgc gatttgttta
    26701 atacctagtt catttaatcg tttataaaca tgctctgata atggtatttg ttgtgatagc
    26761 gataagccat cataaccagc gacaccttca acattgtcat cagttaatgc ttctttagta
    26821 atatctacct caacatgatg tttctctgcc cacgccttga tataaggcat atcttcatca
    26881 cgtacactca tgattttaat ttttgtcatt ttaacatcac ccttaacttt attattcata
    26941 taaatatgct agttctgtta atcttattgc agcttcgtct aatttctggt catctaacgc
    27001 caatgaaatt ctcacataac gattaccatt ctctccaaat ggtttccctg gagcaacaag
    27061 tattgacttc tctttcacta aaaattgctc aaattgctcg ctgtcataac caggcggtgt
    27121 ttccaaccat acatatatgc cacctttagc atgaacaaat ggcaaatcag cttttgcaag
    27181 catggcttcg aatcggtcac gacgtgcttt aaatatattg ctttgttctt ctaaaaaatc
    27241 atcataatga ttcaaagcat atattgcggc atcttgtaat gcaccaaaca tcccagcatt
    27301 tgtgtgcgtt tggtactttt tcaaagcttg aatcatatct ttattaccaa ctgcaaaacc
    27361 gactctaaaa cctgacatgt tataaccttt agacaaggaa taaatttcaa tcgcaacatc
    27421 tttcccattt tccgaagcaa gtatactagg atttttagcg tcgaaaccga aagcaccata
    27481 agcaaaatca tgtacgattt tagtgtatgt atctttaaat ttagctatcg cttcatcaaa
    27541 aacttctttc gtagctgtcg atccagttgg attatttgga tacgttaaat aaatgagttt
    27601 tgttttatct attatttgtg aatcaacttt ggaccaatct ggcaaataat gtggcggttc
    27661 taaattaagt gggacaggct tgccatcagc taaaagtaca cctgctaaat aatccgtgta
    27721 gcctggatca ggtagtaata catagtctcc tggattgata acacatgttg gtactgccac
    27781 taatccattt tttgtaccat ataaaatgca tacttcatct tctttatcta acgtcacatt
    27841 atattgtctt tgataaaaat ctacaatagc ttgcttgaac gcttctttac catgaaaagc
    27901 accatatttt tgattttcag gaatagttag tgcttgttga aaatgatcaa taataccttg
    27961 tggtgtgggc ccatcaggga tcccaactgc catattaatt aatggcaatg gtccatgttc
    28021 gattttacgt cccatcgttt tcccgaaata actatcaggg atatttgcta atttgttaga
    28081 gatcatcaaa ttcctcctct atcattaaac atagcctggg cgactatcat aatcctaaca
    28141 acttgtatcg ctctcattta gatggttaca atgacatcgc cattcaccgt tatgttcaac
    28201 agaacttatg acacacgttg tattgaatga atttattttc attttaggta ggtacattat
    28261 tattgtcaat attaggaatt ttcagatcaa tatacgctca atcgttatga tttaactgtc
    28321 atgcatatcc gcttgcgcaa ccagtaagat atgcttatat aaagtataac gcccatcaag
    28381 gtacgtattc aaacgtgaac cttaacaggc gtcattcatt gttaaataaa acttctttag
    28441 cacatactta tttcactatg ccttttacgt tccccttata cttttctcac atctttctct
    28501 tagactactc ccttacacgc cacgctcaat atctttaatc atttcgtcta cagttatttt
    28561 cgcactcgtt aagacaatag gaacgcctgc acctggatgc gtacttgcac ctgcaaaata
    28621 taaatcttta taatctctcg atacattttg tggacgataa taattacttt gcgctaaagt
    28681 tggcattaaa ccgaatgccg aaccaaattt cgcatgatac gtttgctcaa aatcatttgg
    28741 cgtaaagatt gtttctgaaa caatatgcga ttttatatct tcaaatactt caatcgctgc
    28801 taatttacga taaataattt cctttatttg ttgcgtcaaa gcttcatctg accaatcgat
    28861 tccgctacct gttttaagtt ccggcgtcgg cattaacaca taaataccag ttttgccttc
    28921 tggcgcaagt gatttatcag cgaccgctgg aacatacaca taaatagaag gatcatatga
    28981 taaacgtccc tcaaatattt cttcaatatt gcctctaaaa tcatctgaaa aaataacatt
    29041 atgaagtctc acttgatctg tcacatcaat atctataccg atatacatta aaaatgctga
    29101 acaagagtaa tctaagtctg caattttatg tggtggatac tttttaatag gtgcaaaatc
    29161 tggcattaat gattccgcaa cactagggaa atcagccgta cataaaattt tatcaaattt
    29221 tcttatgtca ccattcactt ttatcgcatc agctcgtttg aatttaggat caataataat
    29281 ttgctcaatt tcagcattaa gttcaatatt aacacctaaa tctttattta attgcgctag
    29341 cccttgagcc atgccataca taccgccttt aataaaatgc acaccaaaca tcatttcaat
    29401 cataggaata attgaatata gtgacgggcc tcgttttgga tcaattccta tgtataacgt
    29461 ttgaaacgct aaaagctttt gtatcttttc gttatcaata taatgttcaa ttagctgatc
    29521 tgcatgattt aacgttttta acttagcacc ttgcacaagt gacgtcatat tataaaagtc
    29581 acttggtttg cgatacgttc tttctaagaa atagcgacgt gcaatttcat attttttata
    29641 aacatccgtt aaaaatgaca taaaaccatg cgttgaacca ggttctatac tttctagcat
    29701 gtgctgtaat tcagctaaat ctgtaggcac cgttatacga tcatcgcggt caaaatacac
    29761 atcgtaaata taacgtaatt gtctcaattc aatataatct tcataatttt taccacacat
    29821 tgtaaataca tctttataaa catctggcat catgacaatt gtggggccca tatcaaatgt
    29881 aaagccgtct ttctttaatt gattcatacg cccgcctacg ttagtatttt tttcaaatat
    29941 cgtcacttca tgaccttgag aagcaatacg ggctgccgct gctaatcctg tgacacctgc
    30001 accaattact gcaatcttca ttattcaacc acctatattc tatgatattt actatttatt
    30061 tcatgaaaca actttgcttt tttccgctta tccacaaaaa cacgttcatg taatgtatag
    30121 ttagcctgtc tcacttcgtc cagtatttca atatatatac gtgctgctaa ttctatgatt
    30181 ggttgtgctt caatactaaa tactttgatt tgatccataa catctcgaaa atctttttct
    30241 gcgatagctg cataatattc ccataagtca atataatgat tattaacacc attttggtac
    30301 acttcagcaa tatcaacttc atattgcttt aatcgttgct tactaaaata tatccgttca
    30361 ttttcaaaat cttcaccgac atctcttaat atattaatca attgcaacga ttcaccaagc
    30421 cttcttgcga catcgtatgt ctgatgtgtt tcatgatcac ttaaaatcgg cgtcaatact
    30481 tcacctactg taccagcaac accataacaa tatccgaata attcagcgtc cgtttcaaac
    30541 attgtaaatt gttgatcttt atatacagta tcaatgagat tatagaaaga ttgaaaggcg
    30601 atatttttat gttgtgcaac atgctgaaga gccatcatga ttctacgatc actttgaaag
    30661 tgatgatgtt catatgggta tttttcaata gattgtatat cttcttttat ttgatttaaa
    30721 aattgaatat cgccataaac atctatactg tcatcaattt tacgacacac agcataaatt
    30781 gcccaaaccg cttttctttg atcttctggt aacaagtcaa aagcgtaaga aaagcttttt
    30841 gaatgtttct tcatgatttt atgacaatat ttaaaattca tagccatcat tgtcatacta
    30901 gtcctcctat attgaaatgc cattaccttg atttattgtt ctttagatat agaatattga
    30961 cgacctttcc attcaactac accataacga tgcgtttgtt tccaagattg gatgaaaatt
    31021 ttagtgaaaa acataaataa caatggatga cataccatta ataaattaga aaattggccg
    31081 acccttcgat gcagatgaat aaattgtgta gtatagctca agtaaactgt taacattttt
    31141 cctacagaca tttggcgata ttttaaacta agacatagcc ctaaaatact cgcgatagaa
    31201 ccgaacaacc acaacacaat tgctgccatg atcttaggct ttgtgccatc tgccccagtc
    31261 gacaaatgct ttgtccatcc ttcttgtaat gactgaaatc cttcttgata catgcgaaat
    31321 gcaacaaatg gaaatccttc ataaactgtt acgggcaatg attgtgaagt atatgcactt
    31381 cctaaagcaa atccttcaat aatatgacgg ttcgcacttt tatgacctcc agttgcataa
    31441 taatcttctt tatttgttaa tgtcaccggt ccaaatgcat gctggttagt ccgaccgtcg
    31501 tctaaggtag aaaatacatt cataccaacg actgtcatta aattaaatat cgctgaaaac
    31561 ccttcgtaga aacgctttgt tatgtgataa ggctgtacgc ttaacaatcc tttttcatct
    31621 tgtaattgat actgattaat caacgtttca acagcatctt tccttaagaa agttacatca
    31681 gcatctacaa aagcaatacg attcgtacat gcatgcgtca caccttgata acaagcatgt
    31741 gatttcccat accatttgcc gtcagcatca tcaacaacat ctactacagt cgcaccatat
    31801 gaacgcgcta cacgtgctgt ttcatctgtc gatccgtcat tcataacaat gacatctact
    31861 ggaacttgct gttgtattat cgaatgtagt aaatgaccta ttcttttttc ttcgtttcta
    31921 gccggaataa taattgttaa tgatttatga ttgaagttca gcgttttcgc ctttagctga
    31981 tgtctacgat taaatatcaa tgcaccacac gccatagaca tggtcactat tactgttaat
    32041 attcgtgata accatttcat agatatcact tcctattctt cgcttctcgc gcgtttattt
    32101 tgtctgcgac ttgttgccca cttaatgtaa ccattggcat gccaccacca ggatttactg
    32161 atccacctac aaagtacaag ttttcaaaat actgactttc tttaggaaat ttaaatcctt
    32221 tgtttttctt tttatctgct acaacaccat atattgcacc acgattagaa cgataatttt
    32281 tttcaatatc ctccggtgtc caaacatctt cataaataat gtgttttctt aaatcagtaa
    32341 gtcccatttt ttctaattta tccaaaattt tatccctaaa cttcgcataa tcttcagtgg
    32401 taaaaggctg atcttgaata tatggaatat gtggtaagac tttgatattt tcataaccta
    32461 ctggcgcttg tgtgtgatca gttttattcg tatttactag ataaatgttc ggatcatctg
    32521 gcaatacctt ttcatgaaaa acttgttgat aattgagata agcattttcc gtaaaaaaga
    32581 aattatgatg tgctaattgc gggtattggc aagcaacacc taaatgcatc acatatcctg
    32641 agcttgccgg ctcaaattcc ctctctaatt tgtttaatcg ttgagtatca aggtgaatta
    32701 aatatttata agtaggtatg acttccatat ttgaaataat ataatctgcc tttacaaact
    32761 cacctgtatc taatctgaca cccgtcacac gtctttgata tgttttaata ttgtccacac
    32821 gtgcacctgt atgaattgtg acaccttctt cacgcgctag cttttccaag gcattggcta
    32881 aatgatggat tccaccttct acataccaaa ggccttgctc ttgttgcata tggaataaca
    32941 tagataatac agctggcgca tcgtatgatg aagaacctac atatttgata aaatagccta
    33001 acatttgtcg caagtatgga ttcgagatac gcttgtctat ggcctgttgc atagtatgta
    33061 cataatcata attaataaga gcatttaatg gcccatgaaa tttaataatt tgagatagtg
    33121 tatctaaacc atagttaaaa tacccttttt cagtaatacg atcgattcgt cttgtataat
    33181 tcaaataatt ttgcagttcc tctatatcct gtttcgacaa tatcacatta tgctgacctg
    33241 tttctttaat accttcatac aaatcgatag tcgttccatc tggaaaaaag ctacgccatt
    33301 gatgtggcaa tcgcttgatt gtaacgtagt ctgacatttg cttattgcta tattcgaata
    33361 ttttttcaaa aatataaggc atcgttaaaa tagatggacc taaatcaaag ccaaagccat
    33421 ctgattcatg acgattcact ttgcctccta tatgattatt ttgttcatat aatgagaccg
    33481 aatagccact ttgcgccatt cgaattgctg cagaaatccc acctaagcca ccaccaataa
    33541 cgatgatatg tttagtcatg acgttcacct cttcgtttta atatgcgtag taactgcgtt
    33601 aatctcggtc gattataacg ttgcacaata atgattggaa cattagttat cattgcatag
    33661 aaaatattta tatactttac taaacgaggg cctttattaa atatgatgac tggaagtatc
    33721 gatatccaat ggatcaactc tgtcctcttt gtctctataa tcattttttc aatttcatca
    33781 gtattgattg tcattaaatg acgctgatca tatatatttt gattaagctg atgaccatct
    33841 aaaatcttat gtttccattt tcttacgtaa aaccatttgt tccaaaattt tccatgcttc
    33901 tcaaagttaa atgatttaaa tattatatgc ttctgacgaa aatacttgtc aggaattctt
    33961 gtacctaaat ttgctatatt tagttgaaca attaaccaat acatactaca aaaaaatgct
    34021 gttttgatat attttttcat ggttttcatc taaattgaat cactctcaat catactgaca
    34081 tagtataaat tatcatttta ttacttagtt ccctaaagat tagtgaataa accgctctca
    34141 tttatattta tataaaacaa aaacgccaat actctcatgt tagagaatat tgacgtcatt
    34201 tgatttacat ttgattaatg aatgaaatta tatgaacctg cttggtttgc tgaaattgta
    34261 cgagacgtaa ccacaccagc accatgtcca tagttcattt ctgaaacacg aacagaaccg
    34321 ttgctgttaa cgccttcaac gtaagcaaca tgaccgtaat agccttgtgt tgtttgcatg
    34381 atagcaccag cttttggtgt attgttcact gtatagccag atgatgcagc tgcgctagcc
    34441 caattacttg cgttacccca tgttgaacca attttcccac caacacgatc aaatacataa
    34501 taagtacatt gtcctgaagt atataagtta cttcctgatg cataaccatt agaaattgaa
    34561 cgaccatttg aagatggcgc tgcagttgta gtcacatgaa cattattact tgttgtgcta
    34621 taacttgcac ctgaaccacc agtataatag ttatttgttg ctgtttggct attgtttgta
    34681 tagttattgt attgatatga atgattatag tagttattgt aagatgcatt gttataacta
    34741 tacgtattgt agttattgta atagtatgtg ttgttttgcg ttaattgact tggattccaa
    34801 tttcctgtcc aagtgtaatg ataattacct tgtgcatcaa ttgtatacgt atagctgtat
    34861 gattgagcgt cattagaatt atatccattg ttattttgtt ctgcggcttg tgcatcatgt
    34921 cctgcaaatg cgatagtggc aagtcctgct gtagcgattg tagctgtaac gatttttttc
    34981 ataattaaat atcctcccaa taatc
//
LOCUS       DAKPJH010000017        34099 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.017, whole genome shotgun sequence.
ACCESSION   DAKPJH010000017 DAKPJH010000000
VERSION     DAKPJH010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34099
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.017"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..368)
                     /locus_tag="OY092_000676"
     CDS             complement(<1..368)
                     /locus_tag="OY092_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HCX1075648.1"
                     /translation="MAFTLSAIQQAHQQFTGVDFPKLFKAFKDMGMTYNIVNIQDGTA
                     TYVHQSEDDIVTSSIKSNHPVAPRSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYK
                     WHIDIQAGTCTYIDLKEQAI"
     gene            609..812
                     /locus_tag="OY092_000677"
     CDS             609..812
                     /locus_tag="OY092_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1075649.1"
                     /translation="MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLT
                     AIKIARIFNEKVETIFIIEEDEA"
     gene            809..1522
                     /locus_tag="OY092_000678"
     CDS             809..1522
                     /locus_tag="OY092_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HCX1075650.1"
                     /translation="MKILRYIGYLLLGGLVGGIIGGILGNFDGLGIENLTFATYNNVV
                     VISIVATIIIILVEIIVLMNQRRALKYKRLVDEEVDIDATDQYELLANRYVLNGSILS
                     IIQTIIAFVVLLIFVVGHAEANAILFFLIPFFASAIFNTQFTLFNRRFDDRMPKIADK
                     NYTEKRLEILDEGERHIELIALFKTYAINLSILILAIVVIGLYSITTGVNQSFSLLLI
                     IAIFIYNAFSYLLKRRRFY"
     gene            1547..2389
                     /locus_tag="OY092_000679"
     CDS             1547..2389
                     /locus_tag="OY092_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075651.1"
                     /translation="MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGK
                     STLINILVGNRHKDNGSITFFDEEHAMDDVEYKEHIGIVFDDLRVPNKLTIKDIDKVF
                     QSIYTTWNSQKFFDLIKYFELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATA
                     GMDVSGREEVMELLEDFVAQGGGILISSHISEDIEQLADKLVFMKDGRMILTEQKDIL
                     LAQYGIVTTEDKDVEIPKHLIIASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIM
                     RGEV"
     gene            2389..3018
                     /locus_tag="OY092_000680"
     CDS             2389..3018
                     /locus_tag="OY092_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HCX1075652.1"
                     /translation="MKGMFLSSFYATRMQTYIYFIVAIIAAGYFAVFNPLMSSAMAGV
                     MLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIV
                     TQSVMIGIMSGLMSFGIIGAYSIIFPLTFKFGAENSNVIMIFASILLLISFVVFFFIY
                     GMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL"
     gene            complement(3408..4541)
                     /locus_tag="OY092_000681"
     CDS             complement(3408..4541)
                     /locus_tag="OY092_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HCX1075653.1"
                     /translation="MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGS
                     ISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFKDVSFMMFNMFIMVFLSNSLYPD
                     FEKTFFPFFLCVAIMYLSIGFQYLLHIRTGLDYGDKRTCQAFAAVAFVISFLSFLSLV
                     LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLA
                     SSSFSIDHFSYIYIFQFMILISLFGVYWIITENYINHKLSSIGFRLSYTHLLINIALG
                     VINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNELTNAKYISSSLGIL
                     VVSYIISLIFKGHDQVMIISVSVATFCIMLIYFKNQRLRQSDE"
     gene            5080..6261
                     /locus_tag="OY092_000682"
     CDS             5080..6261
                     /locus_tag="OY092_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HCX1075654.1"
                     /translation="MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLN
                     PSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSI
                     VTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGIT
                     AENLVEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDE
                     GVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVL
                     DGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLP
                     PEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDEVETGLTSLCIGGGQAIAAVVSKY
                     K"
     gene            complement(6344..7096)
                     /locus_tag="OY092_000683"
     CDS             complement(6344..7096)
                     /locus_tag="OY092_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HCX1075655.1"
                     /translation="MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLF
                     TVKDHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVAN
                     NNDFIVTRAHIEAWEKEHGTIEPGTFVALRTDWSKRWPNIETFENKDANGQQHAPGWG
                     LDALKYLIEERRVEAVGHETFDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQL
                     PTRGAIIYAISPKPKDAPGFPVRAFAIKPSND"
     gene            complement(7139..9367)
                     /gene="metE"
                     /locus_tag="OY092_000684"
     CDS             complement(7139..9367)
                     /gene="metE"
                     /locus_tag="OY092_000684"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HCX1075656.1"
                     /translation="MTTIKTSNLGFPRLGRKREWKKAIESYWAKKISKEELDQTLTDL
                     HKENLLLQKYYHLDSIPVGDFSLYDHILDTSLLFNIIPERFQGRTIDDDLLFDIARGN
                     KDHVASALIKWFNTNYHYIVPEWDNVEPKVSRNVLLDRFKYAQSLNVNAHPVIVGPIT
                     FVKLSKGGHQTFEEKVKTLLPLYKEVFESLIDAGAEYIQVDEPILVTDDSESYENITR
                     EAYDYFEEAGIAKKLVIQTYFEHAHLKFLSSLPVGGLGLDFVHDNGYNLKQIEAGDFD
                     KSKTLYAGIIDGRNVWASDIEAKKVLIDKLLAHTNELVIQPSSSLLHVPVSLDDETLD
                     TSVGEGLSFATEKLDELDALRRLFNQNDSVKYDKLKARYERFQNQSFKNLDYDFESVR
                     TSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFL
                     KNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKP
                     PIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQI
                     ALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDE
                     TQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDI
                     HSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKR
                     QE"
     gene            complement(9364..11205)
                     /locus_tag="OY092_000685"
     CDS             complement(9364..11205)
                     /locus_tag="OY092_000685"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HCX1075657.1"
                     /translation="MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVE
                     RIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVKAIHQAAVRIAKKAANKDTYILG
                     TVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKK
                     YDIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIEL
                     PEHAYLSCYPNASLLDIENSKFKYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIK
                     FIKESIQTLKPVNDKKVIPIPTKALFNPSQNKVRQSLTSKVQERPTVIIELDTPKHLD
                     TDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRN
                     LIGLQSHLLGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGIN
                     TDGDALKKRTHFNIAGAFNPNVRKLDGAVKRLEKKIESGMSYFITQPVYSKEKIIEIY
                     HATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAKTRELSL
                     KLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL"
     gene            complement(11174..12335)
                     /locus_tag="OY092_000686"
                     /pseudo
     CDS             complement(11174..12335)
                     /locus_tag="OY092_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498930.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            complement(12332..13435)
                     /locus_tag="OY092_000687"
     CDS             complement(12332..13435)
                     /locus_tag="OY092_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCX1075658.1"
                     /translation="MKDTQLAQITLTDDSTGAIANPIHLSTAYKHPKLGQSTGFDYTR
                     TKNPTRSTFETCFAKLEHGIASFATSSGMSAIQLICNLFKPHDEILVSFDLYGGTFRL
                     FEFYEQQYDIKFKYVDFTDYEQVEKEITDKTVALFIEPISNPQMIAIDVKTYYQLCKA
                     KGLLSIIDNTFLTPYLSTPLAEGADIVLHSATKYIGGHNDVLAGVVTVKDESLAQQLF
                     DFHNMTGATLSPIDSYLLLRGLKTLHLRIERAQSNARKLAKKCQSLQAIDEVLYSGQT
                     GMLSLRLNKAYSVAKLLENLDICIFAESLGGTETLVTFPYTQTHVDMPDAEKDKRGID
                     EYLIRLSLGVENYEDIEHDIIQALDKAQIGEIV"
     misc_binding    complement(13499..13868)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            14097..14942
                     /locus_tag="OY092_000688"
     CDS             14097..14942
                     /locus_tag="OY092_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HCX1075659.1"
                     /translation="MSELSKSEDQRITKTKYEQIKQIDISDIKPNPYQPRKTFDENHL
                     NDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRASKIAGLKYVSAIIKDLTDEDMM
                     ELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
                     KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSK
                     SETDKVDITKPKFIKQQERQLREQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLN
                     RKYGK"
     gene            15096..15977
                     /locus_tag="OY092_000689"
     CDS             15096..15977
                     /locus_tag="OY092_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HCX1075660.1"
                     /translation="MDQVMSIISSLFEPLTKIETYESVATKLAMIIIYIIVALIVIKI
                     LDKMIAQGFKIQNKSKKGNKKRSKTLISLVQNVVKYIVWFIVVTTILSKFGISVEGVI
                     ASAGVVGLAVGFGAQTIVKDVITGFFIIFENQFDVGDYVKINNGGTTVAEGTVKSIGL
                     RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTS
                     LRSKYYLFVSDPVVIGIDAFEDTRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGI
                     KTPQPIMTPFNHSENGV"
     gene            16007..16210
                     /locus_tag="OY092_000690"
     CDS             16007..16210
                     /locus_tag="OY092_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HCX1075661.1"
                     /translation="MASKYGINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSI
                     MIPRQTFDKKLKKIIVSQDDTQR"
     gene            16222..17319
                     /gene="ychF"
                     /locus_tag="OY092_000691"
     CDS             16222..17319
                     /gene="ychF"
                     /locus_tag="OY092_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HCX1075662.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIV
                     EVPDARLLKLEEMVQPKKTLPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQ
                     VVRAFDDDNVTHVAGRVDPIDDIEVINMELVLADLESVEKRLPRIEKLARQKDKTAEM
                     EVRILNTIKEALENGKPARSIDFNEEDQKWVNQAQLLTSKKMLYIANVGEDEIGDDDN
                     DKVKAIREYAAQEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTY
                     ELLGLSTYFTAGVQEVRAWTFKQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVQYGG
                     ESGAKEAGRQRLEGKEYIMQDGDIVHFRFNV"
     gene            complement(17405..17596)
                     /locus_tag="OY092_000692"
     CDS             complement(17405..17596)
                     /locus_tag="OY092_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075663.1"
                     /translation="MNLNIDWSKDFQEFQEILNSGIHPEWLYCAKANLVLEPAYTGEG
                     KQFFSTQDIINASKIIPFF"
     gene            17841..18137
                     /locus_tag="OY092_000693"
     CDS             17841..18137
                     /locus_tag="OY092_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HCX1075664.1"
                     /translation="MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWG
                     KRRLAYEINDFKDGFYNIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK"
     gene            18158..18661
                     /gene="ssb"
                     /locus_tag="OY092_000694"
     CDS             18158..18661
                     /gene="ssb"
                     /locus_tag="OY092_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1075665.1"
                     /translation="MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGER
                     EADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQF
                     LEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
                     SDDDLPF"
     gene            18713..18955
                     /gene="rpsR"
                     /locus_tag="OY092_000695"
     CDS             18713..18955
                     /gene="rpsR"
                     /locus_tag="OY092_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HCX1075666.1"
                     /translation="MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKI
                     LPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ"
     gene            complement(19221..20159)
                     /locus_tag="OY092_000696"
     CDS             complement(19221..20159)
                     /locus_tag="OY092_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HCX1075667.1"
                     /translation="MLNFDEQIAKLKQMNIFFNIIDTEKANEILRKNNYFFKLAYFRK
                     NFEKKNGGYFIEFAYLSDLATIDMKLRYTMLHLTLDIEHSLKCLVLKLITENNQEDGY
                     KIIDEFLCIDKSYNNSNFDTNSRTPEEVMETKIKNKNEIFKHMNKRGQLPAKLNKYYQ
                     NPPAWVCIEFMQLGQFVSFLNFYYKKYNDEELRVANILMPLVKNIRNKSAHNQPIIAN
                     LNYDSRSPQYLFEKGNNIGISRNMFGIKNFIDTFATLELHNQVCSNAIIQARYHDLDQ
                     LQKRYKRNESYYNNALAIKRFFIALDKIIDFNRPKV"
     gene            complement(20198..20821)
                     /locus_tag="OY092_000697"
                     /pseudo
     CDS             complement(20198..20821)
                     /locus_tag="OY092_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015977853.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            21128..21739
                     /locus_tag="OY092_000698"
     CDS             21128..21739
                     /locus_tag="OY092_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HCX1075668.1"
                     /translation="MFKKHHSKNSILLKSILSLGIIYSGSFGIYSKAGASTQNSSSLQ
                     DKQFQKVEEVPNNSEKALVKKLYDRYSKNTINGKSNKSRNWVYSERPLNENQVRIHLE
                     GTYTVADRVYTPKRNITLNKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKD
                     GGKYTLESHKELQKDRENVKINTADIKNVTFDLVKSVNDIEQV"
     gene            22108..22476
                     /locus_tag="OY092_000699"
     CDS             22108..22476
                     /locus_tag="OY092_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HCX1075669.1"
                     /translation="MKTILKTITYLALTIVGAYAALFILKTIDSHGITDQFNPLVKED
                     DSYVKTTEVSTRMDDQLRSYTQSAFNKEGKETQLMYTATFDVKPHRYLKITHKGHHVE
                     TFEEVEKEEVPKKALDKLSR"
     gene            22657..23229
                     /locus_tag="OY092_000700"
     CDS             22657..23229
                     /locus_tag="OY092_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HCX1075670.1"
                     /translation="MKLKSLAVLSMSAVVLTACGNDTPKDETKSTESNTNQDTNTTKD
                     VIALKDVKTSPEDAVKKAEETYKGQKLKGISFENSNGEWAYKVTQQKSGEESEVLVAD
                     KNKKVINKKTEKEDTVNENDNFKYSDAIDYKKAIKEGQKEFDGDIKEWSLEKDDGKLV
                     YNIDLKKGNKKQEVTVDAKNGKVLKSEQDH"
     gene            complement(23368..23631)
                     /locus_tag="OY092_000701"
     CDS             complement(23368..23631)
                     /locus_tag="OY092_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1075671.1"
                     /translation="MNMHILYNLRTKHNLEIDELAQQLNEKYGTKYEAHQIWEWENHH
                     HEPKFKDAMHLADFFDVPYEMFLESKVKEYQKHLEEVDIRMDK"
     gene            23925..24179
                     /locus_tag="OY092_000702"
     CDS             23925..24179
                     /locus_tag="OY092_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000466745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCX1075672.1"
                     /translation="MFGFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWLG
                     GTLLGHWGPELGSIYILPALIGSIILIALVTLILRAVRKK"
     gene            complement(24218..24426)
                     /locus_tag="OY092_000703"
                     /pseudo
     CDS             complement(24218..24426)
                     /locus_tag="OY092_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498948.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            24604..25185
                     /locus_tag="OY092_000704"
     CDS             24604..25185
                     /locus_tag="OY092_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HCX1075673.1"
                     /translation="MTIYLVRHGESQSNYDNKHFRSYFCGQLDVPLTDFGKKSADDLC
                     DYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISAN
                     PKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAH
                     QVVIRCLMVYFNNVSREEAVDLKVENCKPYIIE"
     gene            complement(25251..25634)
                     /locus_tag="OY092_000705"
     CDS             complement(25251..25634)
                     /locus_tag="OY092_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000868241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075674.1"
                     /translation="MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNI
                     IIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSFTQFTPFTLASFIT
                     SIILFASTIITLAIGGKSVDKNDSL"
     gene            complement(25889..26515)
                     /locus_tag="OY092_000706"
     CDS             complement(25889..26515)
                     /locus_tag="OY092_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NDxxF motif lipoprotein"
                     /protein_id="HCX1075675.1"
                     /translation="MKKRLLLSTFLASALILTGCASDQSDNEDHHTSTGIHAPKSAKK
                     LETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTE
                     KQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDI
                     EKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK"
     gene            complement(26588..28210)
                     /locus_tag="OY092_000707"
     CDS             complement(26588..28210)
                     /locus_tag="OY092_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075676.1"
                     /translation="MLDAHFIYPGKLQNACEYFNLPNDKEGFEVTMHALRPENLHKIY
                     HDMNKTEQKFIETLISKGNPVTIINSHEVNILKLTNHLGFVIQINEDTFFVNNLFLSY
                     INSEVLNSAYGEFETLDTKDHMHLNDEIFRVRQHTRLNDVTMEQALLLKTNDELKAIC
                     RQYGIKGFSNKNKQNLVKLIMTAFFNNNHIIEQVFSNASLFEFSILTGILESDDNYRL
                     NNELITFENIHLMNPGTFLITHFYYYYDFGYDCLILPNDVRKHIENYLNQIADGDIKE
                     AINEFIDEQTIKHSLADFENAIELSMMDDEVHFDILYDEDDDFEDFGTTDSLRNDAIT
                     ELISEIKKGLIDKKDILPLRIILGSVNLYGILSTNHLLYLTQRFYDATFSKEELQYSL
                     DTLAGTELYYIEDDFVFHPVLFDVVESEASGINISDEGYYVPASVEELIYYDRHHYLK
                     SDSEIKAFTSYLRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLIQPIMQLFIDKAILN
                     NVQNDALLIEKATHARNHLRLWSLQGHRDIPN"
     gene            complement(28325..29848)
                     /gene="ahpF"
                     /locus_tag="OY092_000708"
     CDS             complement(28325..29848)
                     /gene="ahpF"
                     /locus_tag="OY092_000708"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HCX1075677.1"
                     /translation="MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKELLTEIS
                     DMSPRLSLSEKSLKRTPSFSVNRPGEETGITFAGIPLGHEFNSLVLAILQVSGRAPKE
                     KQSIIDQIKNLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREE
                     SENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASG
                     SAAIYTARKGLRTSIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDID
                     AMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAF
                     CPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRS
                     LSNVDIKTNAKTTEVVGEDHVTGIRYEDMSTGEEHLLNLDGIFVQIGLLPNTSWLKDA
                     VELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN"
     gene            complement(29864..30433)
                     /gene="ahpC"
                     /locus_tag="OY092_000709"
     CDS             complement(29864..30433)
                     /gene="ahpC"
                     /locus_tag="OY092_000709"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HCX1075678.1"
                     /translation="MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPAD
                     FSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDP
                     SQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYV
                     RKNPGEVCPAKWEEGAKTLQPGLDLVGKI"
     gene            30925..31680
                     /gene="nfsA"
                     /locus_tag="OY092_000710"
     CDS             30925..31680
                     /gene="nfsA"
                     /locus_tag="OY092_000710"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HCX1075679.1"
                     /translation="MSDHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFL
                     QAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYG
                     STEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPIFG
                     MAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGN
                     RKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR"
     gene            complement(31760..33148)
                     /locus_tag="OY092_000711"
     CDS             complement(31760..33148)
                     /locus_tag="OY092_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HCX1075680.1"
                     /translation="MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVF
                     GVLLHLVYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKF
                     AKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTA
                     HTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKRA
                     IDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYI
                     IHLIILSLLGISPIRYIKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFA
                     ATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGA
                     TFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDT
                     FESNDNAALTSH"
     gene            33233..33331
                     /locus_tag="OY092_000712"
     CDS             33233..33331
                     /locus_tag="OY092_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075681.1"
                     /translation="MQLNVNMMKFDRWHKGICKQIVLNLVEKGEKG"
BASE COUNT        11465 a         5185 c         6180 g        11269 t
ORIGIN      
        1 atgatagctt gttcttttaa gtcgatataa gtacaagtac cagcttgaat atcgatatgc
       61 catttataaa tgccagcttc agccatttca tcacaaaatg tttcgaaatc tgtttgtcct
      121 tgttgatgtc tagttaatac atcttgaacg atagattgat ttgatcttgg agcgacagga
      181 tgattacttt tgatagatga agtaacaata tcatcttctg attgatgtac gtaagttgct
      241 gtgccatctt gaatattaac aatattgtac gtcataccca tatccttaaa tgctttgaat
      301 agttttggaa aatcaacacc agtaaattgt tgatgtgctt gttgaattgc agataatgta
      361 aatgccataa tagtctcctt tgaatggttt gatttagtga aaatgcgtgc atcatactaa
      421 aattagaatg ctattaatta tgcagcaagg tgtaacgaaa gtaaaaaaat acgacttgta
      481 ggcgttgagg tgtttgtttc aaaatgtcat acataggttg acactcatat ttttttgtgt
      541 agatttgaca aatatagttg tcaaaaagac aaatataatt tacagtgtaa ttaaggagtt
      601 gatgcgatgt gcgtaatcga ttgaaagaat tacgagcacg agatggctta aaccaaacgc
      661 agcttgctaa acaagcgggt gtttcaagac aaaccatttc gctaattgag cgaaacaact
      721 ttatgccatc ggtattaact gcaataaaga ttgctcgtat cttcaatgaa aaggtggaaa
      781 ctatttttat tattgaggag gatgaggcat gaagatacta agatatatcg gatatctttt
      841 actgggtgga cttgtaggtg gtatcatagg tggaatttta ggtaactttg atggattggg
      901 tattgagaat ttgacgtttg cgacatacaa caatgtcgtt gtaatatcaa ttgttgcgac
      961 cattattatc atattggtag aaatcattgt tttgatgaat caaagacgtg cattgaagta
     1021 taagcggctt gtagatgaag aggtagatat cgatgcaaca gatcaatatg aattgcttgc
     1081 gaatcgttat gttttaaatg gaagtatatt aagcattata cagacaatta ttgcctttgt
     1141 agtgttacta atttttgtgg taggacacgc tgaagcaaat gcaatactat tctttttaat
     1201 accatttttt gctagtgcta ttttcaatac acaatttaca ctgtttaata gaagatttga
     1261 tgatagaatg ccaaaaattg cagataagaa ttacactgaa aagcgattgg aaatattgga
     1321 tgaaggtgaa cgccatatag aattaattgc attatttaaa acatatgcga tcaacttatc
     1381 catattgata ctagccattg tagtaattgg gctttattca attactactg gagttaatca
     1441 aagctttagt ttgctactta tcatcgctat tttcatatat aacgccttta gttatttatt
     1501 gaagagaaga cgtttttatt aaaattaaac aaagaggagc atggatatga caacattgtt
     1561 aaacgtagat agtgtgaaca aacaatacaa agattcggat tttaaattgc aagatgcatc
     1621 tttaacgatt tctactaatg agacagttgg attaattggg aaaaatggct caggtaaatc
     1681 gacattaatt aatattctag taggcaatcg acataaagat aacggtagta tcacattttt
     1741 tgatgaagaa catgctatgg atgatgtcga atataaagaa cacataggta tagtgtttga
     1801 tgatttgaga gtacctaata aattgactat taaagatatt gataaagtat ttcaatctat
     1861 ttatacgact tggaatagtc aaaaattctt tgatttaatc aaatattttg agttgccact
     1921 acaaactaaa attaaaactt tttcaagagg gatgcgaatg aagatagctt taacaattgc
     1981 gctttctcat gatgtgaagt tattaatctt agatgaagca actgcaggta tggatgtttc
     2041 tggacgagaa gaagtaatgg agctattaga agattttgtc gcgcaaggtg gaggcatctt
     2101 aatatcatcg catatttctg aagatataga acaattagcg gataaattag tgtttatgaa
     2161 agatggacga atgattttaa ctgaacagaa agatatactt ttagcacaat atggaattgt
     2221 tacgacagaa gataaagatg ttgaaattcc taagcattta atcatagctt ctagattgtc
     2281 aaaggggaaa tatcaaattt tagttaaaga ttatgcagaa attgaaaatg cagaaccttt
     2341 aaaacacatt gatgacgcta cgaaaatcat aatgcgaggt gaagtataat gaaaggtatg
     2401 ttcctaagta gtttttatgc aacgagaatg caaacatata tttattttat agtcgctatc
     2461 atagctgcgg gatactttgc agtatttaat ccgttaatga gttcggcaat ggctggggtt
     2521 atgttaatca cacctattac tgataatatt aaacatgaaa aagactcaag atggatgtat
     2581 tatgtatcta ctttaccggt taaacgtagt gattatatta agtcatactt tgccttttat
     2641 ttaatcttat tcggtgcaag tttaatgatt ggattagttg tgactacgat tgtgacccaa
     2701 agtgtgatga ttggtattat gtcaggttta atgagttttg gtatcatagg ggcatactct
     2761 atcattttcc cattgacatt taaatttggc gctgaaaact ctaatgtcat tatgatattt
     2821 gcatctattc tactacttat ttctttcgtg gtctttttct ttatatatgg tatggttagt
     2881 ggtgcatcgg cattagaatt tgaaaaaatt agcactgaag gatggctagt tgtcatagta
     2941 tatgcggtca ttggtatcgt tataacaagt gtttcttata tattgtctat taaaattttt
     3001 aacaaacaag aactataatc aatattcttg gtgtgaagct agtcattgaa ataatattta
     3061 gagcaggtga taaatcaata cgattatcat ctgctctttt tggtgttgtg gaatgaaatg
     3121 cgagatgata ggttgaggtg acatctctat atcatatcat ttgtttttag aagattaggt
     3181 tgtgtgggaa ttgcatcctt ttatagtgag gattaacgtg tatatattat tgagtatgtt
     3241 gctgaaattt atttgcgtgt atcaattgat gatggtatat gccaatgatt tcctcggaaa
     3301 tataaaaact cgatcatgta tcataactga tgattgtctc aaaaatatac tgtgaagcac
     3361 aatatttttg gatgcagttc aaatacattg atcgagatca aggttatcta ttcatcactt
     3421 tgacgtagac gttgattttt aaaatagatg agcatgatgc agaaagtcgc aacggatacc
     3481 gagataatca ttacttggtc gtgcccttta aagataaggc tgatgatata tgatactaca
     3541 agtatgccaa gtgaagaaga aatatatttt gcgtttgtca gttcattatg gaaataaggc
     3601 gtgattaacc ataatccaat atagaatatt aaaacactga tatacatcat attaatttca
     3661 aacaagtcat ttagtttatt gttattacta aaaacaattg cggcattaat cacacctaaa
     3721 gcgatattga ttaataaatg cgtatacgat aaacggaaac cgatagatga caatttatga
     3781 ttaatgtaat tttcagtaat gatccaatat acaccgaaaa gactaattaa aatcataaat
     3841 tggaatatat aaatgtaact aaaatgatca atgctaaatg atgacgaagc taaaccaacc
     3901 agtacctcgc caaagataat aattgttagt aatgaaaaac gttctactaa atgcatcata
     3961 ttaacaggtg ataatacaag atatttctga aatggaataa gtcctgtcgc tgcaatgaat
     4021 acgcctaaaa atccagggat gtaatggata ctttgtggta gtactaatga tagaaatgat
     4081 aaaaatgaaa tcacaaaggc tacggccgca aaagcttgac atgtacgctt atcgccataa
     4141 tctaaccctg tacgtatatg taataaatac tggaatccga tacttaaata cataattgcc
     4201 acgcataaga agaatgggaa gaatgtcttt tcaaagtccg gatataggct gttagataga
     4261 aagaccatga taaacatatt aaacatcata aacgagacgt ctttgaatgt aacttgacca
     4321 aatcgatttg taaaaaatgt ttgatgagac cacattaacc ataagaacaa actcatgacg
     4381 atgtatttga aaaataaatc agctgaaatg gaaccgtttt gtgttgttaa aatcacatgt
     4441 gcgatttttt gaatggcata gacgaaaatt aaatcaaaga acaactcatg gaatcctgca
     4501 cgcttttcag ctaaatgttt tggtgttaat gcattaacca taaaatttta actcctttaa
     4561 gatgtgtaat taatttacta agtatactat ttattttttc tagtgaatag aggaagattt
     4621 ggcgatgaag tggaaggagg ggcgactgca aggtaattgc ggaattaaca atcatcagcg
     4681 atttaatatt tgactagaga cgtaatggta aggaaaagtt gatgagaaat tgatggtgaa
     4741 accagctgtg aatagcgatg caatgataga tagcatttaa ttagagtcat tacgcgaaat
     4801 gattaatgat aatttgtggt aaatcaaagc ataattttgt actatagatg aggatgatag
     4861 agcatattta agagtgtgaa atgttaaagt gaaaccgttt acgtttccga ttgcccaaac
     4921 aaattacatc attgtataat atgatttgtt aaatgcataa caagaatgaa aatgtaacat
     4981 acgtagcaat tggtttcata aattggatgt tagtggcgta ttggttcatt agacgtatta
     5041 gtaataaaat tgtatatatc ataaggagat gaatatgaca tgacgagagt cgtattagca
     5101 gcagcataca ggacacctat tggcgttttt ggaggtgcgt ttaaagacgt gccagcctat
     5161 gatttaggtg cgactttaat agaacatatt attaaagaga cgggtttgaa tccaagtgag
     5221 attgatgaag ttatcatcgg taacgtacta caagcaggac aaggacaaaa tccagcacga
     5281 attgctgcta tgaaaggtgg cttaccagag acagtacctg catttacagt gaataaagta
     5341 tgtggttctg ggttaaagtc gattcaatta gcatatcaat ctattgtgac tggtgaaaat
     5401 gacatcgtgc tagctggcgg tatggagaat atgtctcaat caccaatgct tgtcaacaac
     5461 agtcgctttg gttttaaaat gggacatcaa tcaatggttg atagcatggt atatgatggt
     5521 ttaacagatg tatttaatca atatcatatg ggtattactg ctgaaaattt agtagagcaa
     5581 tatggtattt caagagaaga acaagataca tttgctgtaa actcacaaca aaaagcagta
     5641 cgtgcacagc aaaatggtga atttgatagt gaaatagttc cagtatcgat tcctcaacgt
     5701 aaaggtgaac caatcgttgt cactaaggat gaaggtgtac gtgaaaatgt atcagtcgaa
     5761 aaattaagtc gcttaagacc agctttcaaa aaagacggta cagttacagc aggtaatgca
     5821 tcaggaatca atgatggtgc tgcgatgatg ttagtcatgt cagaagacaa agctaaagaa
     5881 ttaaatatcg aaccattggc agtgcttgat ggctttggaa gtcatggtgt agatccttct
     5941 attatgggta ttgcaccagt tggcgctgtt gaaaaggctt tgaaacgtag taaaaaagaa
     6001 ttaagcgata ttgatgtatt tgaattaaat gaagcatttg cagcacaatc attagctgta
     6061 gatcgcgaat taaaattacc tcctgaaaag gtgaatgtta aaggtggcgc tattgcatta
     6121 ggacacccta ttggtgcatc tggtgctaga gtattagtga cattattgca tcaactgaat
     6181 gatgaagttg aaactggttt aacgtcattg tgtattggtg gcggtcaagc tatcgctgca
     6241 gttgtatcaa agtataaata ataagaaaac aggttatcac aacagtatta attacatgtt
     6301 ggtataacct gtttttattt gtttatggat ttattgggta atattagtca tttgatggtt
     6361 taattgcaaa tgctctaaca gggaacccag gtgcatcttt tggtttaggg ctgatagcgt
     6421 aaatgatagc gccacgagtt ggtaattgat ctaaattagt taataactcg acttggtatt
     6481 tatcctgacc aagaatataa cgttcgccaa ctaaatcacc attttttaca acgtccacag
     6541 atgcatcggt atcgaatgtt tcatgaccaa cagcttcaac acggcgttct tcaattaagt
     6601 acttcaaagc atctaatccc caacccggtg catgttgttg tccgttcgca tctttgtttt
     6661 caaacgtttc aatattaggc caacgttttg accaatcggt acgaagtgca acaaaagtgc
     6721 caggttcaat agtaccatgc tctttttccc atgcttctat atgcgcacgt gttacaatga
     6781 aatcattgtt gttcgctact tctgttgaaa agtctaatac aattaacggc aataccaatt
     6841 cttttaaatc aatgtcttct aaataacgtt tattctcgac aaagtgaatt ggtgcatcaa
     6901 tgtgagtacc atattgcgtt acaatattcc aacgttgcac atagaaacca tgatctttaa
     6961 cagtgaataa agttgaaacc tcgccttttt caaactcact aaaacgtggt atttctggat
     7021 caaatgtatg cgttaaatca acccaagttg cttgttttaa agtatttaat tgttgccata
     7081 aaggatattg tgtcataaaa tcacccgttt ttagtttatt atatgataaa tgctgcgatt
     7141 attcttggcg tttagcttta acagcattca caagtacagt caatgcatct ttaacttctt
     7201 cttcttttcg cgttttcaaa ccacagtcag ggtttaccca gaataatgag cggtcgattt
     7261 gttgtagtga acgattgatt gctgtagtaa tttcttcttt tgttggaata cgtggactat
     7321 gaatatcata tacacctaga ccaataccta aatcataatt aatatcttca aagtctttaa
     7381 ttaaatcacc atggctacga gatgtttcaa ttgaaataac atcagcatct aagtcatgaa
     7441 tagcatgaat gatttgaccg aattgagaat aacacatatg tgtatggatt tgagtttcat
     7501 cacgaactga agacgttgca agtttaaatg ataaaacagc atctttaaga tattgttcgt
     7561 gatattcaga gcgtaatggt aagccttcac gtaatgcagg ttcgtcaact tggataactt
     7621 tgattcctgc agcttcaagt gctaatactt cttcgttgat tgctaaagca atttgatctt
     7681 gaacgacttt acgtggtaaa tcaacacgtt caaatgacca gtttagaatt gttacaggtc
     7741 cagttaacat acctttaact ggtttatctg ttaagctttg tgcataaact gtttcatcaa
     7801 cagttaaagg cgctgtccat tttacatcac cataaatgat tggtggtttt acggcacgtg
     7861 aaccatatga ttgcacccaa ccgaatttag ttactaagaa accttgtaat ttttctccga
     7921 agaattcaac catgtcatta cgttcaaatt caccgtgaac taatacatct aagccgatgt
     7981 cttcttgaat tttaatccat cgagcaattt cattttttaa gaatgtttca tatgcttcgt
     8041 ctgtaatgcg tttgttcttc caatctgcac ggtattttcg aacttctcgg ctttgtggga
     8101 atgatccaat agttgttgtt ggtaaatccg gtaagttcaa acgtttttgt tgttgttcaa
     8161 tacgttgcgc gaatggtgat tgtctcgaag tacgcacgct ttcgaaatca taatctaagt
     8221 ttttgaatga ttgattttgg aaacgctcat aacgtgcttt taatttatca tatttaacac
     8281 tatcgttttg attaaatagg cgacgcaatg catctaattc gtctaatttt tcagttgcaa
     8341 agcttaagcc ttcgccaaca cttgtatcta atgtttcatc atctaaagat actggaacat
     8401 gtaataatga agatgatggt tgaatgacaa gttcattagt gtgtgctaac aatttatcga
     8461 ttaagacttt tttagcttca atgtcacttg cccatacatt acgaccatca ataattccag
     8521 cgtataatgt ttttgattta tcaaaatctc cagcttcaat ttgtttaagg ttatagccat
     8581 tatcatggac aaagtctaaa cctaaaccac caacaggtaa agaacttaag aatttaagat
     8641 gtgcatgttc gaagtatgtt tgaatgacta attttttagc aataccagct tcttcgaaat
     8701 agtcataagc ttcacgtgta atattttcat agctttcact gtcgtctgta actaagattg
     8761 gctcatcaac ttgaatgtat tcagcacctg catctattaa tgattcaaac acttctttat
     8821 aaagtggtaa taacgtttta actttttctt caaaagtttg gtgaccgcct tttgataatt
     8881 taacaaaagt aatcggacca acaatgacag ggtgagcgtt aacgtttaaa gattgggcat
     8941 atttaaagcg atctaataat acgttgcgac tcactttagg ctcaacattg tcccattcag
     9001 gtacgatgta atgatagtta gtgttaaacc attttataag tgcacttgca acatggtctt
     9061 tattaccgcg agcaatatca aataataagt catcatcgat agttctacct tggaaacgtt
     9121 cagggatgat gttgaataat aatgacgtat ctaaaatatg gtcatataaa gagaaatcac
     9181 caactgggat gctatctaag tgatagtact tttgtaataa taaattttct ttatgtagat
     9241 cagttaatgt ttgatctaat tcttctttag aaatcttctt tgcccaataa ctttcgatgg
     9301 cttttttcca ttctcttttt ctacctaatc ttgggaatcc taagtttgat gttttaattg
     9361 ttgtcataat attgcctcct tgtgagcagt aatagatttt gagtatgctg caagttctaa
     9421 tgaatcttcg acattttgaa acggtgtgat aatgtataaa ccattaaaat attcatgaac
     9481 agtatcgatt aaatcctttg aaagcttaag acttagttct cgtgttttgg ctttatcatc
     9541 tttaactgct tcaaattgtt gtaaaatttc atctgacatc ttgattcctg gcacttcatt
     9601 atgcaaaaag agtgcgtttt tgtaacttgc gataggcata atgcctatga aaaatggttt
     9661 gttcaagtgc ttagtggcat ggtaaatttc aatgattttc tctttgctgt acacgggttg
     9721 tgttataaaa taagacattc cgctttctat ctttttctct agtcgtttta cggcaccatc
     9781 taatttacga acattagggt taaaggcgcc agcgatgttg aagtgtgtac gtttcttcag
     9841 cgcatcaccg tcagtgttaa taccttgatt aaatcttaga gcgagttcag ttaatccttt
     9901 agaattaaca tcatagacat tggttgcacc tggtaagtga ccaacttttg aaggatcacc
     9961 agttatggct aatatttcgt taacgccaat gagcgataat ccaagtaaat gggactgcaa
    10021 gccgattaag tttcggtctc gacatgtaat atgtacgagt ggttcaatat tgtaatattg
    10081 cttaattaag cttgcagcag caatgttgct aattctgaca gttgccaatg aattatctgc
    10141 gagtgttacc gcatctacat ttgctttatc aagtttagcg atattttcaa aaaatctatc
    10201 cgtgtccaaa tgtttcggtg tgtccaattc gataataacg gttggacgtt cttgaacctt
    10261 agatgttaat gattgtctaa ctttattttg agatggattg aaaagtgctt tcgttggtat
    10321 cggaatcact tttttgtcat taacaggttt aagtgtctga atagattctt taataaattt
    10381 gatgtgctct ggcgttgtac cacagcaacc accaattaaa cgaacacctt cgcgaattaa
    10441 attttgagca acttggccga aatattgtgc attgtcacta tacttaaatt tactattttc
    10501 aatatctaat aagctggcat ttggataaca agataagtat gcgtgctctg gtaattcaat
    10561 atgtgtgaaa gactcttgca tatggtgtgg gccatgatga caattgagtc ccacgatgtt
    10621 tgcaccacat tgaacgagtt gttttaatcc ttcattgatt gcctgaccat taactaagta
    10681 atttgtgttt gaagcagtta attgagcaat gattggaatg tcgtatttct ttctcgttcg
    10741 tgaaatgaca tttgttagct cttctaggtc gtaatacgtt tcgaaaagta gcgcgtcaac
    10801 gccttcttca attaaggtgt ctatttgaat ttcagtatga taaagaatag tttgtaagct
    10861 gatatcctct tgtttgatac ctctaaaccc accaactgtg cctaatatat acgtatcttt
    10921 atttgctgct ttttttgcga tgcgtacggc agcttgatgt atagctttaa ctttatcttc
    10981 aagaccgaat cgttttaact tttcaaaatt tgcaccataa gtattggttt gaatgacatc
    11041 agcaccagct tcgatatatg aacgatggat acgttcaact ttatctggat ggctaagatt
    11101 atatgcttct ggacaggtgt ctaatccttc agagtataaa atggttccaa tagcgccatc
    11161 agctactaaa acattatctt tcaattgtgt gaggaattga ctcattgaat gcctccttta
    11221 atgcgtattt gatgtctgca atgagttcat caggatcttc gagaccaaca cttaatcgga
    11281 atagaccgaa agtgatacca cgttcttgtc tcacttcttc aggtagtgtt gcgtgagaca
    11341 ttgttgctgg gtgcgaaagt attgtttcca caccacctag actcactgaa acgagtggta
    11401 atgtcagtgc atcgacaaat tgttgtgctt tagactcatc agctaaacgt aagccaataa
    11461 cggcaccgcc atttttagct tgttctaaat gagatgcagt aagtcccggg taataaactt
    11521 ctgaaatttc atcttgcttt attaaaaatg acacgatttt ttgcgcgttt tcgacagatt
    11581 gtttaaatct gattggaaat gtttttaaat gtttagcaag tgtccagcta tcttgagcag
    11641 ataacatatt gcctgtacca ttttgtatta aataaagagc ctcactaatt gcctcattat
    11701 tagtaatgac agcaccagca attaaatcgc tatgtccact taaaaatttt gtagcactat
    11761 gaatgacaat atcagcgcct agtaataaag gtgattgacc taacggtgtc ataaatgtat
    11821 tgtccacagc taccagtagt tcatgctttt cggctatttt agaaacagct ttgatatcag
    11881 taattttaaa acagggattc gatggtgttt cgatataaat taattttgtg tttgattgaa
    11941 tggcaccctc gatttgttcg atcttggtag tatctacggt tgtaaattca atattaaaac
    12001 gattcaaaat ttgctcagtg aggcgaaaag taccgccata tacatcatca ggtaagatga
    12061 catgatcacc agatttgaaa gtcaaaagta ctgctgaaat agcagcaata cctgatgcaa
    12121 aagcaaaagc gaattttccc tgttctaatc gtgctaactt ctcttctaaa agttcacggt
    12181 tagggttgcc acttcgtgca taatccatat ttaacatcgc caccaagact tgtttgatgg
    12241 aatgttgaag aatcatagag tggtgggtta gctgaatgat attccacacc tctacgccaa
    12301 tcgaatatca cttctgtctc ttttgaaagt gtcatacaat ctctccaatc tgagctttat
    12361 ctaatgcttg gatgatatcg tgttcgatgt cttcataatt ttcaacgcct agtgataagc
    12421 ggattaaata ctcatcaatg ccacgtttat ctttttcagc atctggcata tcaacatgtg
    12481 tttgtgtgta agggaaggtc actaatgttt cagtgcctcc taaactttct gcaaaaatac
    12541 aaatgtctaa attttctaat aatttagcga cgctataggc cttgttaagt cttaaactaa
    12601 gcatgccagt ttgcccgcta tatagtactt cgtcaatcgc ttgaagtgac tgacattttt
    12661 tagcaagttt tcttgcgttt gattgcgcgc gctcaatgcg taaatgcaaa gttttaagtc
    12721 cacgtaacaa caaataacta tctattggtg atagtgttgc gccagtcatg ttgtgaaaat
    12781 caaacaactg ttgtgcgagt gattcatctt tgacggttac gacacctgct agtacatcgt
    12841 tatgtccacc aatatatttc gtagctgaat gtaagactat atcagcacct tctgctaacg
    12901 gtgttgaaag ataaggtgtt aaaaaagtat tgtcgataat tgacaataag cctttagctt
    12961 tacaaagttg atagtacgtc tttacatcaa tagcaatcat ttgtgggtta gatattggtt
    13021 caatgaataa tgcaactgtt ttatcagtga tttctttttc aacttgttca taatctgtaa
    13081 aatcaacgta cttaaatttg atatcgtatt gttgttcgta aaactcaaac aatctaaatg
    13141 tgcccccata taaatcgaat gaaactaaaa tttcatcatg aggtttaaat agattacata
    13201 ttaattgaat ggctgacatt ccacttgatg tagcgaatga tgcaatacca tgctcaagtt
    13261 tggcaaaaca ggtttcaaat gttgagcgtg taggattttt agtacgtgta taatcaaatc
    13321 ctgtcgattg tcctagtttt ggatgcttgt aggcagtaga taaatggatt ggatttgcta
    13381 tagcaccggt tgaatcatca gttaatgtga tttgggctaa ctgtgtatcc ttcatattaa
    13441 gaccctccta taagaaaaaa taaaaagctt ccgtccttcg tacccgaatg aatcggataa
    13501 aaaggacgaa agcttatgtt tcgcggtacc acctttgttt gttattccat cgctgaaata
    13561 accttattca gtacgcatta aaagtaaata tgcttactga acaattatca caatttaagt
    13621 cgttaagtaa ggatatagta atgtgctatc tcatacttat taacaaaaaa tcgtgcgtaa
    13681 agaatccagt acgccattta acatcaatgt taatactgta tcgctataac gggcgaaccc
    13741 gtagacacct catattggca tcaacactcc aaggccattt tcaaacacgc tttcaaaatc
    13801 ttctctcagc tactaaagac tctctgtata agcagggtgt gttttacttt cctctttatt
    13861 gtgtttacgt ttcattaaac tgttataaga tattaattag cttacagagt aaaaaaagat
    13921 ttgtcaacaa ttattcagaa aattttgatt taaaagttaa tttgtttgtg aaattgtatt
    13981 tggtatcttg aagttaaaaa atgaattatt ttttaaataa agtgtggtta atggttgtct
    14041 gactcattta gaatacataa aatatattta actgttgtta tcaaataaaa agtgatgtga
    14101 gtgaattgtc aaaaagtgaa gatcaacgta ttactaaaac aaaatatgaa caaattaagc
    14161 aaatagatat atcggatatc aaaccgaatc cgtatcagcc ccgaaaaact ttcgatgaaa
    14221 atcatttaaa tgatttggca gattcaatta agcaatatgg tattttgcaa ccaattgtgc
    14281 ttagaaaaac agttcaaggt tattacattg tagttggtga aagaaggttt agagcttcga
    14341 aaattgctgg tctaaaatac gtatcagcga ttatcaaaga tttaacagat gaagatatga
    14401 tggaactggc ggtcatagaa aatttacaac gagaagactt aaatgcgatt gaagaagctg
    14461 aaagttatca acgtttgatg acagatttga aaattacaca acaagaagta gcgaagcgat
    14521 tgagtaagtc gcgcccgtat atagcgaata tgttgaggtt attacatttg ccgaaaaaga
    14581 ttgctgacat ggtaaaagat gggcgactga caagtgcaca tggacgaacg ttattggcaa
    14641 ttaaagatga acaacaaatg cttaggttag cgaaacgggt tgttaaagaa aagtggagtg
    14701 tcagatattt agaaaaccat gttaatgaat taaaaaatgt ttcgtcaaag tcggaaacag
    14761 acaaagtaga tataactaag cctaaattta taaagcaaca agaacgacag ttgcgagaac
    14821 agtatggcgc aaaagtagat atatcgataa aaaaatcagt cggcaaaatc tcatttgagt
    14881 ttgaatcaca agatgacttt gtgagaatca ttgaacaatt aaatcgtaag tatggtaaat
    14941 agttacacaa ttttatataa tatcactttg tgaatctata gatatatcga tagttatcta
    15001 tattctttga agatgatgcg acttcagtag gttggaagaa tacagcaata ttaataaaat
    15061 tatttgagac tatatagaag ggagtaacgc taattatgga tcaagttatg agtattattt
    15121 catcgctatt cgaaccatta actaaaattg aaacatatga aagtgtcgct actaaattag
    15181 cgatgataat tatatatatt atcgttgcat taatcgtaat taaaatactt gataaaatga
    15241 ttgcccaagg atttaaaata caaaacaaga gtaaaaaggg taataaaaaa cgttcgaaaa
    15301 cattaatatc attggtgcaa aatgttgtta aatatattgt gtggtttata gttgtaacta
    15361 ccattttaag taaatttggc attagtgttg aaggagtaat tgcaagtgct ggtgtcgtag
    15421 gcttagcagt aggttttggt gctcaaacta tagttaaaga cgtaattaca ggtttcttta
    15481 ttatatttga aaaccagttt gatgtaggtg attatgttaa gataaacaac ggtggtacaa
    15541 ctgtagcaga gggaacagtt aaatcaattg ggctccgttc aacacgtatt aatacaatat
    15601 ctggagaact tacaatcttg ccaaatagta gcatgggtga aataacgaat tactcaatta
    15661 cgaatggaac agcaattgtt aaaattccag tatctgtaga tgaaaatatt gataatgttg
    15721 agaagaaatt aaacaaatta tttacatctc tgcgtagtaa atattattta tttgtaagtg
    15781 atcctgttgt gattggtatt gatgcctttg aagatactag agtgatatta agggtttcag
    15841 cagaaacaat accaggtgaa ggtttctctg gtgcgcgtat tattcgtaaa gaagtacaaa
    15901 aaatgttttt acaagaaggt atcaagacac cacaaccaat aatgacacct tttaatcata
    15961 gtgaaaacgg tgtttagtag tttataatac atggaggtca tatttaatgg cgtcaaaata
    16021 tggaataaat gatatagtag aaatgaaaaa acaacatgcg tgtggaacca atcgttttaa
    16081 aattattaga atgggtgctg acattagaat taagtgtgaa aattgtcaac gaagcattat
    16141 gattccacgt caaacgtttg ataaaaaact aaaaaaaatc atcgtatctc aggatgatac
    16201 acaaagatag gagaatgatt catggcttta acagcaggta tcgttggctt accaaacgtt
    16261 ggtaaatcaa cattatttaa tgcaattaca aaggcgggtg ccttggcagc aaactatccg
    16321 ttcgcaacta tagacccaaa cgtgggtatt gtagaagtgc cagatgcaag actacttaaa
    16381 ttagaagaaa tggttcaacc taaaaaaaca ttacctacta catttgaatt tacagatatt
    16441 gccggaattg ttaaaggtgc ttctaaaggt gaaggtttag gtaataaatt cttatcacat
    16501 attagagaag tagatgcgat ttgtcaggtc gttcgtgcat ttgatgatga taacgtaact
    16561 catgttgctg gtcgagtaga ccctattgat gacatcgaag ttatcaatat ggaattagta
    16621 cttgcagact tagaatcagt tgaaaaacgc ttacctagaa ttgaaaaatt ggcacgtcaa
    16681 aaagataaga ctgctgagat ggaagtgcgc attttaaata ctattaaaga agctttagaa
    16741 aatggtaaac ctgcccgcag tattgacttt aatgaagaag atcaaaaatg ggtgaaccaa
    16801 gcgcaattac tgacttctaa aaaaatgctt tatatcgcta atgttggtga agatgaaatt
    16861 ggtgatgatg ataatgataa agtaaaagcg attcgtgaat atgcagcgca agaagactct
    16921 gaagtgattg ttattagtgc aaaaattgaa gaagaaattg ctactttaga tgatgaagat
    16981 aaagaaatgt tcttagaaga tttaggtatt gaagaaccag gattagatcg attaattaga
    17041 acaacttatg aattattagg attatcaaca tattttactg ctggtgtgca agaagtacgt
    17101 gcttggacat ttaaacaagg tatgactgca cctcaatgtg ctggtatcat tcatactgat
    17161 tttgaacgtg gatttatccg tgccgaagta acaagttatg acgactatgt acaatatggt
    17221 ggcgaaagtg gcgctaaaga agcgggcaga caacgattag aaggtaaaga atatattatg
    17281 caagatggcg atatcgttca tttcagattt aatgtataaa cgatagagtg aagttaatta
    17341 aatagtatat atgtagaaga ggcggaatca attgttcgcc tcttttaatt atgcgtgtta
    17401 tttattaaaa gaatggaata attttactcg cgttaataat atcttgagtg ctgaaaaatt
    17461 gtttgccttc gccagtataa gcaggctcta aaacaagatt agcctttgca caataaagcc
    17521 attcaggatg aatgccacta ttaagtatct cttggaattc ttgaaaatct ttagaccaat
    17581 caatatttaa attcattcct taccacctca caaccattat agaacatgtg ttcgcttttg
    17641 tgaagtgtat ttttaaaaaa tatcatagaa aatttcaaat gtattaatgt caaaaatgat
    17701 atgaagagta gtttgaatta ttattgtaaa aagtaatggc gcatgatata attctttatt
    17761 gtgagtaatg aaaattattc cttgcttatc tgttttaaga ttgataagcc gtatagacca
    17821 caaggaggtg caaatataaa atgagaacat atgaagttat gtacatcgta cgcccaaaca
    17881 ttgaggaaga tgctaaaaaa gcgttagttg aacgtttcaa cggtatctta gctactgaag
    17941 gtgcagaagt tttagaagca aaagactggg gtaaacgtcg cctagcttat gaaatcaatg
    18001 atttcaaaga tggtttctac aacatcgtac gtgttaaatc tgataacaat aaagctactg
    18061 acgaattcca acgtctagct aaaatcagtg acgatatcat tcgttacatg gttattcgtg
    18121 aagacgaaga caagtaataa ttagaggggg cgtttaaatg ctaaatagag ttgtattagt
    18181 aggtcgttta acgaaagatc cggaatacag aaccactccc tcaggtgtga gtgtagcgac
    18241 attcactctt gcagtaaatc gtacgttcac gaatgctcaa ggggagcgcg aagcagattt
    18301 tattaactgt gttgttttta gaagacaagc agataatgta aataactatt tatctaaagg
    18361 tagtttagct ggtgtagatg gtcgcttaca atcccgtaat tatgaaaatc aagaaggtcg
    18421 tcgtgtgttt gttactgaag ttgtgtgtga tagcgttcaa ttccttgaac ctaaaaatgc
    18481 gcaacaaaat ggtggccaac gtcaacaaaa tgaattccaa gattacggtc aaggattcgg
    18541 tggtcaacaa tcagggcaaa acaattcgta caataattca tcaaacacga aacaatctga
    18601 taatccattt gcaaatgcaa acggaccgat tgatataagt gatgatgact taccattcta
    18661 ataaaaatta acgaaattaa agcgaaaaaa ttatcaaagg aggcacacaa tcatggcagg
    18721 tggaccaaga agaggcggac gtcgtcgtaa aaaagtatgc tatttcacag caaatggtat
    18781 tacacatatc gactacaaag acactgaatt attaaaacgt tttatctcag aacgcggtaa
    18841 aattttacca cgtcgtgtaa ctggtacttc agctaaatat caacgtatgt tgactacagc
    18901 tatcaaacgt tctcgtcata tggcattatt accatatgtt aaagaagaac aataatattt
    18961 aatatattat aacccccgta ggcataggct tacgggggtt tttgtgtttt gggatataga
    19021 aaaagggcag aaaaaggacg atgtgaatgt tttgtgttcg ggatttgcac aaagatatgt
    19081 ttatattgca aaaataatat gaatttagat gcataaaaaa agaactacgc attttaaata
    19141 aaatgcatag ctcttctttt tcttgcatac gaattaaaat aactcgcgag acctataagt
    19201 ctctttcctc actagatagt ttatactttt ggtctgttga agtcaataat tttatctaaa
    19261 gctataaaaa atcttttgat agctaatgca ttattataat agctttcgtt tcttttatat
    19321 cgcttttgaa gttggtccaa atcgtgatat cttgcttgga taattgcatt actacaaact
    19381 tgattatgta attctagagt agcgaaagta tctatgaaat tttttattcc gaacatgttt
    19441 ctagatatgc ctatattatt ccctttttca aataaatatt gaggagatct actgtcataa
    19501 tttagatttg ctatgatggg ttggttatga gctgatttgt ttcttatatt tttaactaaa
    19561 ggcattaaaa tattagcaac tctcaattct tcgtcattgt acttcttgta atagaagttg
    19621 agaaacgaaa cgaattgacc tagttgcatg aattcaatgc aaacccatgc gggtggattt
    19681 tgatagtatt tattcaactt tgcgggtagt tgccctcttt tattcatatg cttaaatatt
    19741 tcgtttttat ttttgatttt ggtttccata acttcttctg gtgttcttga atttgtgtca
    19801 aaatttgaat tgttatatga tttatcaata cataagaact catctattat tttataacca
    19861 tcttcttggt tattttctgt tattagtttt aagactagac actttaaact atgttcaata
    19921 tctaaagtta aatgcaacat tgtgtatctt aatttcatat ctatagttgc taaatctgat
    19981 aaataagcaa attctatgaa atagccgcca ttcttttttt cgaaattttt tcggaaataa
    20041 gctagtttga agaagtaatt attttttcta agaatttcat ttgctttttc ggtgtcaata
    20101 atattaaaaa atatattcat ctgttttaat ttcgctattt gctcatcaaa attgagcata
    20161 ggcttaattt ctgctagtgt atcatctttt tccaatatta actccccaat cgttcaaatt
    20221 tattcatcat atctttcgcc atctgattag taacatgtgt gtatatctct agagttttta
    20281 taatctgaat gacctacatg ctcttgcatt gcttttaagt taattcctaa ttgagcaagt
    20341 gtagatatat gagaatgatg taatgtatgc gtcgttgcag gtttcttaat agaactaatc
    20401 tcagttgtct ctttgatagc ccccccttta gtaatgtggc taattttgtt cgagtcgata
    20461 gggctaccag ccgtatttgt gaatatgtac tctctatcaa taaacttatc attccaagca
    20521 taagtgttct tagtaagtcg atgctttggg tagtgagccc tatggcctta tagctattac
    20581 ttctttcagt tgtctctttt actccggatg cttccatttt taatcagttt cccaattaac
    20641 tttaccgtcg atatctagcg ttttatcttg atagtttata ttttctttat ttattgcaaa
    20701 tagttcaccg atacgcatgc cattatcaat ttaaaactga actatagatt ttaccttttt
    20761 ataattacgt tttgtcgttg gacgtttttt tatacttaat tacatagtcg aaacaatcca
    20821 gtaacccctt aacttaatta tcttcattat tttctaaagt gttattacgt ttagctagta
    20881 acgcatcact atagggatat ctattttatc tattacacat ataactttga attgcttact
    20941 attttaaatt aacaaattct attctcttag atttagtcca attatgtgta gacgatttat
    21001 agttattaaa ttcagagtgg tagcaaatta aagttaatca agagttaaga tgaagttaat
    21061 tcatgaacac gtctattatt tctataattg tagcaaataa agctttacat caaggaggta
    21121 attaaatatg ttcaaaaaac atcattctaa aaattcaatc ttattaaaat ctattctatc
    21181 gctaggtatc atctattcgg gatcatttgg aatatattca aaagcaggcg cgtcaacaca
    21241 aaattcctca agtttacaag ataaacaatt ccaaaaagtt gaagaagtac caaataattc
    21301 agaaaaagct ttggttaaaa aactgtacga tagatacagc aaaaatacaa taaatggaaa
    21361 atctaataaa tctaggaatt gggtttattc agagagacct ttaaatgaaa atcaagttcg
    21421 tatacattta gaagggactt acacagttgc tgatagagta tatacaccta agaggaacat
    21481 tactcttaat aaagaagttg tcactttaaa agaattggat catatcataa gatttgctca
    21541 tatttcttat ggcttatata tgggagaaca tttgcctaaa ggtaacatcg tcataaatac
    21601 aaaagatggt ggtaaatata cattagagtc gcataaagag ctacaaaaag atagggaaaa
    21661 tgtaaaaatt aatacagccg atataaaaaa tgtaactttc gatcttgtga aaagtgttaa
    21721 tgacattgaa caagtttgaa attaagttaa ataagtatat acagtgtttt atcgctaata
    21781 ctttgaaagt taggtatcta aaggtgccta gctttctttg ttatgatcag caccatcata
    21841 tagaaaattc tttaatgacg tttatgccga aatctacaaa aataatttct cttttatggt
    21901 taatcaatat gtttttatat tcgacaacct taaaattaac ttctttcaat tccataataa
    21961 ggtctctata aaataacttt gtttaaaaac gattcgtatc tttcagattc aaataccatc
    22021 attttctcct aatacttaca ttttaattac aattatgtaa gttgttttca gagacatcct
    22081 attttatatt ttgtcagagg tgatcttttg aaaacgattt taaaaacaat aacatatctc
    22141 gcacttacta tcgttggcgc ttatgctgct ctattcattt taaaaacaat agactctcat
    22201 ggtataacag atcaatttaa cccattagta aaggaagatg attcttatgt taaaacgaca
    22261 gaggtgtcta ctagaatgga tgatcaactc cgaagttata ctcaaagtgc ttttaataaa
    22321 gaagggaaag agacgcaatt aatgtatact gctacatttg atgttaaacc gcatagatac
    22381 ttgaaaatta cacataaagg tcatcatgta gaaacttttg aagaagtaga aaaggaagaa
    22441 gtaccaaaga aagcattaga caaactgagt cgataatagc acccttatat tacattactc
    22501 attttaaaaa tgattacgaa cgaaagtaac gcatgaagag taatttaaaa aaatttgtaa
    22561 taattatgaa tagaattaaa aacaaggggt aatacaatct atatagcata taagcttttg
    22621 ttatgagttt ctaaaaaagg aagagagagt gatattatga aattaaaatc attagcagtg
    22681 ttatcaatgt cagcggtggt gcttactgca tgtggcaatg atactccaaa agatgaaaca
    22741 aaatcaacag agtcaaatac taatcaagac actaatacaa caaaagatgt tattgcatta
    22801 aaagatgtta aaacaagccc agaagatgct gtgaaaaaag ctgaagaaac ttacaaaggc
    22861 caaaagttga aaggaatttc atttgaaaat tctaatggtg aatgggctta taaagtgacg
    22921 caacaaaaat ctggtgaaga gtcagaagta cttgttgctg ataaaaataa aaaagtgatt
    22981 aacaaaaaga ctgaaaaaga agatacagtg aatgaaaatg ataactttaa atatagcgat
    23041 gctatagatt acaaaaaagc cattaaagaa ggacaaaaag aatttgatgg tgatattaaa
    23101 gaatggtcac ttgaaaaaga tgatggtaaa cttgtttaca atatcgattt gaaaaaaggt
    23161 aataaaaaac aagaagttac tgttgatgct aaaaacggta aagtattaaa gagtgagcaa
    23221 gatcactaaa atatgtcgta acactaacga tagcaacatg tcttaattca tattaattat
    23281 taaaaatacc ctcacaacgc aatgtgatat atccagtata gatttgaaag gatatatgcc
    23341 taacgtgttg tgagggttta attgcatcta cttatccatg cgaatatcga cttcttctaa
    23401 atgtttctga tattctttaa ccttactttc taaaaacatt tcatatggta catcaaagaa
    23461 gtcagctaaa tgcatggcat ctttaaattt aggttcatgg tgatgattct cccattccca
    23521 aatttggtgt gcttcatatt tagtaccata tttctcattt aattgttgtg ctaattcgtc
    23581 aatttctaaa ttatgtttag ttcgtaagtt atataaaata tgcatattca ttgttcatta
    23641 acctcgcttc ttgatttaaa attcaaagat gctctaataa tatgtgtata ttctagtcct
    23701 ataacataaa ataatcaagc tatgaattcg ccagaaaaaa taatgtatat gatattgccg
    23761 gtacagagac tttaaataac gatagctaca ttgaataaaa ttgatattca attactactt
    23821 tgaaaaatat ttagataaaa ataatttgaa tttgttttag aaagtctaat aacgggtact
    23881 acttagaata acgcaaaata aatagaaaaa ggagactgaa aattatgttt ggatttattg
    23941 gaatgttaat tgtcggtggc ttaattggat gggctgctgg tgctattatg ggtaaagata
    24001 tcccaggtgg tattttaggt aatattatcg caggtattat tggatcatgg ttaggtggaa
    24061 cattattagg acattggggt cctgaactag gaagcattta catcttacca gctttaattg
    24121 gttcaattat cttaattgca ctggtaacgc taattttaag agctgtgcgt aaaaaataaa
    24181 atattcaact taggttgaat ggaaatcaag atggcattca gttgtcatct tttttatttg
    24241 cgtgaaaatg gtcaatatgt attataatat ttgaaaatgt aggtaagata ggattaaaaa
    24301 gtaataaatt aacatgagga aaggttggaa ataaaaaagc gagtatttga caaataaaaa
    24361 aggatgacgt tgggttgcgc catccaggag tattatgttc atgaatataa aagactgtgt
    24421 agtcatttaa gaactacacc catatagtaa cacatcactt gattaaagac aatactattt
    24481 ttagagtcat taatttaaaa tatgaattaa ttcttttttt agaatagaat attaagattg
    24541 atattgaatt agtagtcaaa gtgttatggt agatatgaaa tacataatgt aaggagtaat
    24601 attatgacga tttatttagt tagacatggc gaatcacaat cgaattatga taataaacat
    24661 tttcgatctt atttttgtgg acaattagat gtgccgttaa cggattttgg taagaaaagt
    24721 gcagacgatt tatgtgatta ttttaaagag aaacagatta aacatgtata tgtttcagac
    24781 ttattaagga cacagcaaac gtttgaacat atttttccat atgacattgc atcaacgact
    24841 acgcctctat taagagaacg ttcgcttggc gtatttgagg gtgaatataa agatgaaatc
    24901 agtgcgaatc cgaaatatga aaaatatttc aatgatccaa actttaaaga ctttcgtcat
    24961 agtttttcac aaaaagcgcc tgaaggagaa agttatgaag atgtatatca acgcgtcgaa
    25021 cattttatga atcatgttgt caatgaagat acacaaaaag atgatatcgt cattgttgca
    25081 catcaagttg tcattcgttg tttaatggtt tattttaata acgtttcacg ggaagaagct
    25141 gtggatttaa aagttgaaaa ttgcaaacca tatatcattg aatagaagta tagaggttct
    25201 gaaaagctgt gttttatagc ggccttcaga accttttttg tatttggaat ttaaagggaa
    25261 tcattcttat caacagactt accaccaata gctaatgtga taattgtgct tgcgaacaaa
    25321 ataattgaag ttataaatga cgctaatgta aaaggtgtaa attgtgtgaa cgataatatc
    25381 aatgataaaa agaaccaaga gatagcccct agaaattgta aaatagcaga agaaattcta
    25441 aaactcatat aatcatatat agctaaaaca agtgaaggta atgcgactaa taccattata
    25501 atgatgttga gggtgaataa atatggctgt tcaaaagtta ctgtgtttgg tcctgttgga
    25561 tgcattgctg ctaagaacaa gcaaacaatc gttgataaaa ttgctaaaat aataaaagta
    25621 attcgaactt tcatcatgac catcctttgt ttatagagtc aatataatta tgaaatacgt
    25681 tagagatata gtcaaatgcg tcaactaatg gggattttag gatggataga gaatttaagg
    25741 caattaaaaa agcatcaaac agtaatatgc tgcttgatgc ccaaatgatg actttagcta
    25801 aattgattag tcacttttaa ggataaagaa ttgccatgag ttaaagcaca tgtaatgatg
    25861 tgttacatgt cgcaatgatg gcattcagtt atttatcgat aacatcactc ttgatacctt
    25921 tagattttaa gaaatcttta attttatctt gttgcttttt attaacatca ccggcatatt
    25981 ttgttggcac gtcgactaca ttgattttat tttgcggttg atagctaagc ttttcaatat
    26041 cttcatcaac attggcgatt gtactattta aagctttgaa gtaattcatc attaattcaa
    26101 cgggtttctt atattcttta ggaatattgt tttcagtgac aaatttcttg aaatgcaaat
    26161 cattttttac agctaagtta gataagtgac taagtgtttc tgcttgtttt tcagtcactt
    26221 ttgtttgact atcaatttgt ttatctagtt tatgttgcat tatatatttg ttatcaagta
    26281 tatcgctatt tacagacaaa tacttttcta tagcttgctt catttctgca tcactaatat
    26341 cactattttt cttatctgag ttaaagatat cttttgtttc taatttttta gcgcttttag
    26401 gtgcatggat gccagtactt gtgtgatgat cttcgttatc agattgatcg gacgcgcaac
    26461 ctgtaagaat taatgcagat gctaaaaatg tacttagtag taatctcttt ttcataatgt
    26521 aatataactc cttggtttat ctttaattga aaaaatgtgt attcatgttt aatagagtaa
    26581 cattgaatta gtttggaatg tcacgatgac cttgcaatga ccatagacgt aaatgattac
    26641 gtgcatgagt tgctttttct atcaataatg catcattttg gacgttgtta aggatagctt
    26701 tatctataaa taactgcata attggttgta tcaatttaga tgtaggtatt gtacgtaaaa
    26761 gcataatgat ttcattcaca tatttttcct tctcaatatc atttttcata ttgatttgtt
    26821 tgcgtagata acttgtgaac gctttaattt ctgaatcaga tttcaaatag tggtgtctat
    26881 cataatagat taattcctca acagaagctg gtacatagta cccttcatca gaaatattaa
    26941 tgcctgacgc ctcagactcg acaacatcaa ataacacagg gtgaaacacg aagtcatctt
    27001 caatataata tagctcagta ccagctaaag tatctaagct atattgcaac tcttctttac
    27061 taaaagtagc gtcataaaat ctttgtgtga gatatagtag atgattagtt gataaaatac
    27121 catacaagtt tacagaacca agtataatac gaagaggtaa aatatctttt ttatctatta
    27181 atcctttctt aatctcagaa atcaattcag tgattgcatc atttcttaaa ctatcggttg
    27241 taccaaaatc ttcaaagtca tcatcttcat catatagtat atcgaagtga acttcgtcat
    27301 ccatcattga taattctatc gcattttcaa aatctgctaa actatgctta atcgtttgct
    27361 catcaataaa ttcattgata gcctctttta tatcgccatc agcgatttga ttcaggtaat
    27421 tttcaatatg tttacgcacg tcatttggta aaatgagaca atcatacccg aagtcataat
    27481 aataatagaa atgagtaatt aaaaatgtgc caggattcat caaatgaatg ttttcaaatg
    27541 taattagttc attgtttaat cgatagttat catcactttc gagtatgcca gtaagaatac
    27601 taaactcaaa tagggaagca ttagaaaaca cttgttcaat gatatgatta ttattgaaaa
    27661 atgctgtcat aatcaattta acaagatttt gcttgttttt atttgagaat cctttgatac
    27721 catactgtct gcaaattgct tttagctcat cattagtttt taacagtaag gcctgttcca
    27781 ttgtgacatc gtttaagcgc gtatgttgtc ttacacgaaa gatttcatca tttaaatgca
    27841 tatggtcttt tgtatctaat gtttcgaatt caccatatgc actatttagt acctctgaat
    27901 tgatataact taaaaataaa ttatttacaa agaacgtatc ttcgttaatt tgaataacaa
    27961 aacctagatg atttgttagc tttaaaatat taacctcatg gctatttata attgtgacag
    28021 gattaccctt agatataagt gtttctataa atttttgttc tgtcttattc atatcatgat
    28081 aaatcttatg taaattttca ggacgtaaag catgcatcgt gacttcaaat ccttctttgt
    28141 cgttcggtaa attaaaatat tcgcatgcat tttgtaactt tcctgggtag ataaaatgag
    28201 catcaagcat ttttacacac ctcattgtat tttttaagtt tatcataaca tgattttatg
    28261 ccaggataaa aaaataacag catcttaaca aatgtaagat actgtcagtg aaactgtgaa
    28321 aactttagtt tctgataata tagtcaaagg catttaatgc tgcatttgca ccagcgccca
    28381 ttgaaatgat aatttgtttg ttcttctgat ctgtgacatc gccagcagca aatattccag
    28441 gtacgttagt attattgtta cgatcaataa caatttcacc acgttcgttt aattcaacag
    28501 catcttttaa ccatgatgtg tttggaagta aaccaatttg aacaaagata ccatctaagt
    28561 taagtagatg ttcttcgccg gtgctcatgt cttcgtaacg tatacctgta acatggtctt
    28621 ctccgacaac ttcagtagtt ttggcatttg ttttgatatc aacatttgat aaagaacgta
    28681 aacgatcttg taacacgttg tctgctttta attcgctagc gaattcgaat aatgtaacat
    28741 gattaacgat accagcaagg tcaattgctg cttcaacccc agagttaccg ccaccgataa
    28801 ctgctacgtc tttattttca aatagaggtc cgtcacagtg cgggcagaat gcaacacctt
    28861 tattaatcaa ttgctcttca cctggaatgt ttagcttacg ccaacctgca ccagtagcaa
    28921 taatgactgt tttactttct aagacagcac cgttttctaa cgtaacttta attgcttcgt
    28981 cagtcttttc gatatctgta gcacgaatgc ctgtcattgc atcaatgtca tattgatcaa
    29041 tgtgcgctgc taagttagaa gaaaattcag aaccagttgt ttctttaaca gtaatgaagt
    29101 tctcaatacc agcagtatca ttaacttggc caccgatacg atcagcaact atactagtac
    29161 gtaaaccttt acgtgctgtg taaatcgctg cactaccact agcaggacca ccaccaacga
    29221 ttaagacatc ataaggttct ttattttcaa actcagatgc atctgccgta ctgcctagtt
    29281 tcgaaagaat atcttggatt gtcatacgac cattgccaaa ttcttcgcca tttaaaaaga
    29341 cagcagggac tgccatgatg ttttcagatt cttcacggaa cactgcacca tcaatcatag
    29401 aatgcgtgat gttagggttg atcacactca ttaagttaag tgcttgaacg acatcaggac
    29461 atttttgaca cgttaaacta atgaatgttt caaaatggaa tgaaccttct aagtttttaa
    29521 tttggtcaat gattgactgt ttttctttag gtgcacgacc actaacctgt aaaattgcta
    29581 aaacaagtga gttaaactcg tgacctaatg gaatacctgc aaatgttata cctgtttctt
    29641 caccaggacg attgactgag aaacttggtg tacgttttaa agacttttca gaaagtgaaa
    29701 gtctaggtga catatcagaa atttctgtta ataattcttt tagttcttta gatttatcat
    29761 ctgaaccaag gctggcaacg aattcaacgt tgccctccat tagttctaat agttgtttaa
    29821 gttgttgttt taaatcagca ttaagcatgg ttgtaatgcc tccttagatt ttacctacta
    29881 aatctaaacc aggttgcaat gttttagcgc cttcttccca tttagctggg catacttcgc
    29941 cagggttttt acgaacatat tgagctgctt tgattttgtg agctaatgta ctagcgtcac
    30001 gtccaattcc gtcagcgtta atttcagatg cttgtacaac accgtctggg tcgataatga
    30061 atgtaccacg ttgagctaag ccagtagctt catctaatac atcaaaatta cgagtgattg
    30121 tttgtgatgg gtcaccaatc atagtgtaag tgattttgct aattgcatct gaatggtcat
    30181 gccatgcttt gtgtacgaag tgagtatcag ttgatactga gaatacattt acgcctaatt
    30241 tttgtaattc ttcatattgg ttttgtaagt cttctaattc agttggacaa acgaatgaga
    30301 agtcagcagg atagaagcat actacgctcc aagaaccttt taaatcttct tgtgtaactt
    30361 ctttaaattg atcttttttt ggatcgaaag cttgcgctgt aaatggtaag atttctttgt
    30421 taattaatga cataaatatc ttcctcctaa gaatttaagt atgaattaga actatcaatt
    30481 gattgtgctt aattataata attctaatct cttagttagc attattacat tttgatccag
    30541 aatagtcaac tggataactt tgtaaagtga atgattactt ttaaaataaa gaaagataat
    30601 ataaagtgct ttgataatgg attttgtagt tgatgattta aaaggttgtg tctatattta
    30661 atatcttgat tttaatgtaa aaaatgtaaa aaaagaagat ttgtattctc aactaagtca
    30721 accttattga taatggtgtg agaatatttg ttcgagatgg atgaaggtaa tgcgtgagaa
    30781 actggatttt tcaagtacga gacaatattt ttaaaagttc aattattaac ttataagcaa
    30841 ataattgcta taaaaaagtt tggacgtgta caattgcaat atgaagattt ttaattaact
    30901 gtaaagtatc gaggagtggg taacgtgtca gatcatgtat ataatcttgt gaaaaagcat
    30961 cattctgtta gaaaatttaa gaataagcct ttaagtgaag acgttgttaa gaaattggta
    31021 gaagctggac aaagcgcttc gacgtcaagt ttcctgcaag catactcaat tattggtatc
    31081 gacgatgaga agattaagga aaatttacga gaagtttctg gacaacctta tgttgtagaa
    31141 aatggctatt tattcgtctt tgttattgat tattatcgtc atcatttagt tgatcaacat
    31201 gctgaaactg atatggaaaa tgcatatggt tcaacggaag gtttgctagt aggtgcaatc
    31261 gatgcagcat tagttgccga aaatattgcg gtaactgctg aagatatggg gtatggcatt
    31321 gtctttttag gatcattaag aaatgatgtt gaacgagttc gagaaatttt agacttacct
    31381 gactatgtct tcccgatatt tggtatggca gtaggggaac ccgcagatga cgaaaatggt
    31441 gcagccaagc cacgcttacc atttgaccat gtcttccatc ataataagta tcatgctgat
    31501 aaggaaacac agtatgcaca aatggcagat tacgaccaga caatcagcga gtactatgat
    31561 caacgtacaa acgggaatcg caaagaaaca tggtcgcagc aaattgagat gttcctagga
    31621 aacaaagcaa gattagatat gttagaacaa ttgcaaaaat caggcttaat acagcgatag
    31681 caagatacca aaataacccg ccccctctag cttaaaatga taagtatagc tagagggggc
    31741 gggtatttct tgcaatgaat tagtgtgaag ttaatgcagc attatcattt gattcgaaag
    31801 tatctttgtc ccaatgttta gttaacttgg cggtacctgt accagctagc attgaatcgt
    31861 tcacgtttaa tgctgttcta cccatgtcaa tcaatggttc aacggagatg agcacgccgg
    31921 ctaaagcgac tggcaagttt aacgttgaca acaccaatat ggatgcaaat gtagccccgc
    31981 caccgacgcc agcaacgccg aatgaactaa taatcacgac agcgattaac gttacaataa
    32041 attgtaaatc aatttctaca ttagcgacgg gtgcgaccat aattgcaagc atggcagggt
    32101 aaatgcctgc acaaccattt tgtccaatcg acaatccaaa tgtcgcagcg aaattggcaa
    32161 taccttctgg cacgcctaga cgtcttgttt gtgtttgtac attcagtggt aaggcgcccg
    32221 cacttgagcg tgatgtgaat gcaaagatta atacttccaa agtcttttta atatagcgaa
    32281 tagggctaat gcctaacagg cttaaaataa ttaagtgaat gatatacatc gtaattaatg
    32341 cagcgtacga tgcgattaag aattttccta aagtccaaat ggcgccaaag tcacttgtcg
    32401 ataacgtgtt ggccataatt gctaatacac cgtatggcgt taaacgtaag acgaacgtca
    32461 caatcgccat tactagtgaa tagatagcgt caatcgcacg cttaagcaat tcaccatgat
    32521 caggttgttt gcgtgctacg cgtaaataag caaatcctat aaacgaagca aatatcacga
    32581 cagcaatcgt ggaagttgca cgttgtccag tgaaatctaa gaatggattt ttaggcaata
    32641 attccaaaat ttgttgtggt aacgtatgtg ctgttaaatc tttcgcttgt ttagcaattt
    32701 cgcttccacg tgcttgttca gcgttaccaa gattaattgt tgatgcgtct aaaccaaaca
    32761 ccaaggcata cacaacacca acaattgcag caatggtgac agtgccaatt aaaaagataa
    32821 aaatgagact accaatttta gcaaactttt ctccgatttg aattttagtg aatgcagcga
    32881 caatagaaat gaaaattaaa ggcatcacaa tcatttgcaa caatgcaacg taaccttgtc
    32941 cgacaatgtt gaaccagtca cttgttgatg taataacatt cgaatgtgtt ccatagacaa
    33001 gatgtaataa cacgccaaat acaatgccga tacctaaagc tgtaaacaca cgtttcgcaa
    33061 aagatatatg tttgcgagcc atcatgtgca atattacgat gaaaatcacc aatacaataa
    33121 tattaatcag tgtaagaaaa gcattcatga acgtcactcc tcaaattttt gaatataatt
    33181 ccgactagta tgctaagaat aatattaatt ttaaaatatt tcaagagggc atttgcaatt
    33241 aaatgtaaac atgatgaaat tcgaccgttg gcataaggga atttgtaaac aaatcgtttt
    33301 gaatttagta gagaaaggtg aaaagggtta atagtgttat gacctagtcg attaaagttg
    33361 atatttgaaa atgaagcagg gcattaaatg taataaatta aataagttgt cattacagcg
    33421 ttaataatag aaatgatttt aacaggaaaa aagtgatgaa tatttggaaa agatatatat
    33481 cgtgcactgt cataagagat aagatatgag aaaacaaatg catccttgaa tcgagatgtg
    33541 gctatgacgg tttgataaaa attgctaacc tcatatttat tgaataaaaa gataataaat
    33601 gatcaacctt gaaaagacgc ttcgaacaaa cacgttgtaa aaaattctgt cgaatcaaaa
    33661 ttagcatctt ttgagtgttc gtgtgtgcag gtgggagttc aaaagctatc gtaaaaaaat
    33721 atttttgttt gagcaaaaag gcgtttgtag taaatgtgaa tatgagtgag cccttgtgcg
    33781 attcgtcatt tactaacaca gccaaacatt taaattgaat gggtttatta agatgaatct
    33841 atttaggaat acacaggagc catcccattt aaaagtaaca tactataaaa atttattcaa
    33901 aattcaatat taataataat gaataattaa aaaacctgaa acaaattagt ttgatatgct
    33961 ttcttcaaag tagatattga atggagtata tcagcttgtt tcaggtttta tgaattgagt
    34021 attaaatttg aaagtaaatt acagttctat aggtttataa aaaatcagtt tttaaataat
    34081 agatatatta ctgagtctt
//
LOCUS       DAKPJH010000018        33753 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.018, whole genome shotgun sequence.
ACCESSION   DAKPJH010000018 DAKPJH010000000
VERSION     DAKPJH010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 33753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33753
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.018"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..524
                     /locus_tag="OY092_000713"
     CDS             <1..524
                     /locus_tag="OY092_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HCX1075682.1"
                     /translation="TLESLVDEGQITNSVLENYMRYAERTQVYRQASLIRRMIVLLRG
                     ALLKRRVQTRVNSASSLSVTDNLMELNKINKLVHYNVVSRLSKETTKDNTLEVGMVCD
                     GYLMRIENLTPSNFFNSASEDTITKIKLNALREQRRILRELIDTDEVSEGTALKLREA
                     INYDEMVIVDSMT"
     gene            complement(1419..2348)
                     /locus_tag="OY092_000714"
     CDS             complement(1419..2348)
                     /locus_tag="OY092_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HCX1075683.1"
                     /translation="MKKLVPLLLALLLLVAACGTGGKQSSDKSNGKLKVVTTNSILYD
                     MAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETGNGWFEKA
                     LEQAGKSLKDKKVIAVSKDVKPIYLNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFI
                     DNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGI
                     TPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFG
                     EVYTDSIGKEGTKGDSYYKMMKSNIDTVHGSMK"
     gene            complement(2345..3181)
                     /locus_tag="OY092_000715"
     CDS             complement(2345..3181)
                     /locus_tag="OY092_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HCX1075684.1"
                     /translation="MLEFVEHLFTYQFLNRALITSIIVGIVCGTVGSLIVLRGLSLMG
                     DAMSHAVLPGVALSFLFGIPMFVGALITGMIASIFIGYITSSSKTKPDAAIGISFTAF
                     LASGIIIISLINTTTDLYHILFGNLLAITNSAFLTTIVIGSIVLILIIIFYRPLMIST
                     FDPTFSRMSGLNTTLLHYFVMLLLSLVTVASIQTVGIILVVALLITPASTAFLISKKL
                     YSMMIIASLISVISSIVGLYYSYIYNIPSGATIVLCTFVIYIITLFFTKFTNRKKRGS
                     LT"
     gene            complement(3175..3918)
                     /locus_tag="OY092_000716"
     CDS             complement(3175..3918)
                     /locus_tag="OY092_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HCX1075685.1"
                     /translation="MLETKDLNLFLGNKHVLKNISLSIPVRGEIIGIMGPNGAGKSSL
                     IKSLIGEFNATGTKLLYNKPIQQQLQHITYIPQKAHIDLDFPISVEQVILSGCYKEIG
                     WFRRHNKSARDKLKQLLSDLELESLRHRQISELSGGQLQRVLVARALMSESEVYFLDE
                     PFVGIDFSSEKLIMTKIENLKQQGKLILIIHHDLSKAKQYFDRIILLNQTLRYFGDSE
                     EAMSVTRLNETFMSSTDCSDPSQRSNITC"
     gene            4040..4684
                     /locus_tag="OY092_000717"
     CDS             4040..4684
                     /locus_tag="OY092_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HCX1075686.1"
                     /translation="MLTEEKEDYLKAILTNNGDKNFVTNKILSQFLNIKPPSVSEMVG
                     RLEKAGYVETKPYKGVRLTEDGLTHTLDIIKRHRLLELFLIEILKYNWEEVHQEAEIL
                     EHRISDLFVERLDSLLNFPETCPHGGVIPRNNEYKEKYITTILNYEPGDIVTIKRVRD
                     KTDLLIYLSSKDISIGNEVEIVSKDEMNKVIIIKRNDNVIIVSYENAMNMFAEK"
     gene            complement(4764..5516)
                     /locus_tag="OY092_000718"
     CDS             complement(4764..5516)
                     /locus_tag="OY092_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HCX1075687.1"
                     /translation="MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKAVLNYLDVI
                     LNYIPVLTHEFGHVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLT
                     TIGGYFMPPIMLLIGLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIM
                     LYFILKDENIVEIQLLVTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKE
                     LSHVPIFIYSTIWIIFNLYAVNILLKYTHLIN"
     gene            5752..6516
                     /locus_tag="OY092_000719"
     CDS             5752..6516
                     /locus_tag="OY092_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HCX1075688.1"
                     /translation="MTVEERSNTAKVDILGVDFDNTTMLQMVENIKTFFANQSTNNLF
                     IVTANPEIVNYATTYQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDE
                     CLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFAHHHGYIDLEDETVVKRIKL
                     FKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLEVFAGAKKRAPYIFRKLNIE
                     WIYRALIDWKRIGRLKSIPIFMYKIAKAKRKIKKAK"
     gene            complement(6577..7371)
                     /gene="tagH"
                     /locus_tag="OY092_000720"
     CDS             complement(6577..7371)
                     /gene="tagH"
                     /locus_tag="OY092_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HCX1075689.1"
                     /translation="MNVSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDIS
                     LKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEVSVIAISAGLSGQLTG
                     IENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINITV
                     NPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEG
                     GKLKDYGELDDVLPKYEAFLNDFKKKSKAEQKEFRNKLDESRFVIK"
     gene            7718..8530
                     /gene="tagG"
                     /locus_tag="OY092_000721"
     CDS             7718..8530
                     /gene="tagG"
                     /locus_tag="OY092_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter permease
                     subunit TagG"
                     /protein_id="HCX1075690.1"
                     /translation="MSAIGTVFKEHVKNFYLIQRLAQFQVKIINHSNYLGVAWELINP
                     VMQIMVYWMVFGLGIRSNAPIHGVPFVYWLLVGISMWFFINQGILEGTKAITQKFNQV
                     SKMNFPLSIIPTYIVTSRFYGHLGLLLLVIIACMFTGIYPSIHIIQLLIYVPFCFFLT
                     ASVTLLTSTLGVLVRDTQMLMQAILRILFYFSPILWLPKNHGISGLIHEMMKYNPVYF
                     IAESYRAAILYHEWYFMDHWKLMLYNFGIVAIFFAIGAYLHMKYRDQFADFL"
     gene            8629..9732
                     /locus_tag="OY092_000722"
     CDS             8629..9732
                     /locus_tag="OY092_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HCX1075691.1"
                     /translation="MNVLIKKFYHLVVRILSKMITPQVIDKPHIVFMMTFPEDIKPII
                     KALNNSSYQKTVLTTPKQAPYLSELSDDVDVIEMTNRTLVKQIKALKSAQMIIIDNYY
                     LLLGGYNKTSNQHIVQTWHASGALKNFGLTDHQVDVSDKGMVQQYRKVYQATDFYLVG
                     CEQMSQCFKQSLGATEEQMLYFGLPRINKYYTADRATVKAELKHKYGITNKLALYVPT
                     YREDKADNRAIDKAYFENCLPGYTLINKLHPSIEHSDIDDVSSIDTSTLMLMSDIIIS
                     DYSSLPIEASLLNIPTIFYVYDEEAYDKVRGLNQFYKAIPDSYKVYTEEDLIMTIQEK
                     EHLLSPLFKDWHKYNTDKSLHQLTEYIDKMVTK"
     gene            9729..10790
                     /locus_tag="OY092_000723"
     CDS             9729..10790
                     /locus_tag="OY092_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCX1075692.1"
                     /translation="MRLTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIP
                     MIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDPHDSDAFMVINPTSIVLPGKL
                     DSLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLMEQPDLLSMMSFD
                     GKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDE
                     DFNRYITEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQ
                     LVKDYIMSMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKKF
                     LIQLKGRKFAHRTKSMLKR"
     gene            10853..11251
                     /gene="tagD"
                     /locus_tag="OY092_000724"
     CDS             10853..11251
                     /gene="tagD"
                     /locus_tag="OY092_000724"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HCX1075693.1"
                     /translation="MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIK
                     HKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFL
                     KDKCEVIYLKRTEGISTTKIKQELYGKDAK"
     gene            complement(11368..12663)
                     /gene="pbp4"
                     /locus_tag="OY092_000725"
     CDS             complement(11368..12663)
                     /gene="pbp4"
                     /locus_tag="OY092_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP4"
                     /protein_id="HCX1075694.1"
                     /translation="MKNLISIIIILCLTLSIMTPYAQAANSDVTPVQAANQYGYAGLS
                     AAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDETVTM
                     TNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVD
                     LMNNKAKAIGMKNTHFVNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKE
                     TPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKR
                     GKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYY
                     VENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTV
                     AKSMWAEHPLFTIIGGACLVAGLALIVHMIINRLFRKRK"
     gene            13084..14811
                     /locus_tag="OY092_000726"
     CDS             13084..14811
                     /locus_tag="OY092_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075695.1"
                     /translation="MKRENPLFFLFKKLSWPVGLIVAAITISSLGSLSGLLVPLFTGR
                     IVDKFSVSHINWNLIALFGGIFVINALLSGLGLYLLSKIGEKIIYAIRSVLWEHIIQL
                     KMPFFDKNESGQLMSRLTDDTKVINEFISQKLPNLLPSIVTLVGSLIMLFILDWKMTL
                     LTFITIPIFVLIMIPLGRIMQKISTNTQSEIANFSGLLGRVLTEMRLVKISNTERLEL
                     DNAHKNLNEIYKLGLKQAKIAAVVQPISGIVMLLTIAIILGFGALEIATGAITAGTLI
                     AMIFYVIQLSMPLINLSTLVTDYKKAVGASSRIYEIMQEPIEPTEALEDSENVLIDDG
                     VLSFEHVDFKYDVKKILDDVSFQIPQGQVSAFVGPSGSGKSTIFNLIERMYEIESGDI
                     KYGLESVYDIPLSKWRRKIGYVMQSNSMMSGTIRDNILYGINRHVSDEELINYAKLAN
                     CHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESE
                     LKIQEALETLMEGRTTIVIAHRLSTIKKAGQIIFLDKGQVTGKGTHSELMASHAKYKN
                     FVVSQKLTD"
     gene            15170..16399
                     /locus_tag="OY092_000727"
     CDS             15170..16399
                     /locus_tag="OY092_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCX1075696.1"
                     /translation="MFLLINIIGLIVFLGIAVLFSRDRKNIQWQSIGILVVLNLFLAW
                     FFIYFDWGQKAVRGAANGIAWVVQSAHAGTGFAFASLTNVKMMDMAVAALFPILLIVP
                     LFDILMYFNILPKIIGGIGWLLAKVTRQPKFESFFGIEMMFLGNTEALAVSSEQLKRM
                     NEMRVLTIAMMSMSSVSGAIVGAYVQMVPGELVLTAIPLNIVNAIIVSCLLNPVSVEE
                     KEDIIYSLKNNEVERQPFFSFLGDSVLAAGKLVLIIIAFVISFVALADLFDRFINLIT
                     GLIAGWIGIKGSFGLNQILGVFMYPFALLLGLPYDEAWLVAQQMAKKIVTNEFVVMGE
                     ISKDIASYTPHHRAVITTFLISFANFSTIGMIIGTLKGIVDKKTSDFVSKYVPMMLLS
                     GILVSLLTAAFVGLFAW"
     gene            16654..16746
                     /locus_tag="OY092_000728"
     CDS             16654..16746
                     /locus_tag="OY092_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075697.1"
                     /translation="MFCYYKQHKGDNFSIEEVKNIIADNEMKVN"
     gene            16924..17757
                     /locus_tag="OY092_000729"
     CDS             16924..17757
                     /locus_tag="OY092_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HCX1075698.1"
                     /translation="MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILY
                     YAFHISPAITNFLVNAVLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNS
                     IVNAIFGGVSVGLGIGVIILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAIS
                     LTVIPLDKVLVTVISLYIGTKVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGL
                     TILNGHGYYTREEKDVLYVVISKTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLAD
                     E"
     gene            18038..18835
                     /locus_tag="OY092_000730"
     CDS             18038..18835
                     /locus_tag="OY092_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075699.1"
                     /translation="MNRLHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKST
                     LLKALSRLLAVKEGEVFLDDENIHTQSTKEIAKKIAILPQSPEVADGLTVGELVSYGR
                     FPHQKGFGRLTAEDKKEIDWAMEVTGTDTFRHRSINDLSGGQRQRVWIAMALAQRTDI
                     IFLDEPTTYLDICHQLEILELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDI
                     IATGSTEDVLTQEILEKVFNIDVVLSKDPKTGKPLLVTYDLCRRAYS"
     gene            18871..19875
                     /locus_tag="OY092_000731"
     CDS             18871..19875
                     /locus_tag="OY092_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HCX1075700.1"
                     /translation="MTNRENPTPLKFLYYIIGLSMILLIILFISTLIGDAKIQASTII
                     EAIFNYNPSNQQQNIINEIRIPRNIAAVIVGMALAVSGAIIQGVTRNGLADPALIGLN
                     SGASFALALTYAVLPNTSFLILMFAGFLGAILGGAIVLMIGRSRRDGFNPMRIILAGA
                     AVSAMLTALSQGIALAFRLNQTVTFWTAGGVSGTTWSHLKWAIPLIGIALFIILTISK
                     QLTILNLGESLAKGLGQNVTMIRGICLIIAMILAGIAVAIAGQVAFVGLMVPHIARFL
                     IGTDYAKILPLTALLGGILVLVADVIARYLGEAPVGAIISFIGVPYFLYLVKKGGRSI
                     "
     gene            19872..20888
                     /locus_tag="OY092_000732"
     CDS             19872..20888
                     /locus_tag="OY092_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HCX1075701.1"
                     /translation="MISSNNKRRRWIALAVFSILLFLGCTWSITSGEYNIPVERFFKT
                     LIGQGDAIDELILLDFRLPRMMITILAGAALSISGAIVQSVTKNPIAEPGILGINAGG
                     GFAIALFIAIGKINADNFVYVLPLISILGGITAALIIFIFSFNKNEGVTPASMVLIGV
                     GLQTALYGGSITIMSKFDDKQSDFIAAWFAGNIWGDEWPFVIAFLPWVLIIIPYLLFK
                     SNTLNIIHTGDNIARGLGVRLSRERLILFFIAVMLSSAAVAVAGSISFIGLMGPHIAK
                     RIVGPRHQLFLPIAILVGACLLVIADTIGKIVLQPGGVPAGIVVAIIGAPYFLYLMYK
                     TKNV"
     gene            21122..22090
                     /gene="dhaK"
                     /locus_tag="OY092_000733"
     CDS             21122..22090
                     /gene="dhaK"
                     /locus_tag="OY092_000733"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HCX1075702.1"
                     /translation="MMKKLINKKETFLTDMLEGLLIAHPELDLIANTVIVKKDKKEHG
                     VAIVSGGGSGHEPAHAGFVAEGMLDAAVCGEVFTSPTPDKILEAIKAVDTGDGVLLVV
                     KNYAGDVMNFEMAQELAEMEGINVETVIVRDDIAVTNEAQRRGVAGTVFVHKLAGYLS
                     EKGLALGEIKSRVEALLPEIKSIGMAIEPPLVPTTGKYGFDIEDDKMEIGIGIHGEKG
                     IHREEVKDIDHIVRTLLDELYKEVTANEVIVMVNGMGGTPLSELNIVTKYIQQNLTAR
                     TVNVVKWFVGDYMTSLDMQGFSITIVPNKPEYLEAFLAPTTSQYFK"
     gene            22132..22716
                     /gene="dhaL"
                     /locus_tag="OY092_000734"
     CDS             22132..22716
                     /gene="dhaL"
                     /locus_tag="OY092_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HCX1075703.1"
                     /translation="MKVNDMKARLLNLEETFKKHESELTELDRAIGDGDHGVNMVRGF
                     SSLKEKLDDSSMQSLFKSTGMALMSNVGGASGPLYGFSFVKMSAVTKDDMDNQDFTTL
                     IQAFAEAVESRGKVTLNEKTMYDVVARAAEKLKNGETLTFNDLQQLADNTKDMVATKG
                     RAAYFGEESKGYIDPGAQSMVYILNALIGDEDNA"
     gene            22709..23071
                     /locus_tag="OY092_000735"
     CDS             22709..23071
                     /locus_tag="OY092_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HCX1075704.1"
                     /translation="MPKIILVSHSKEIANGTKSLLKQMAGDVDIIPIGGLPDGSIGTS
                     FDIIQEALTELDDDAMCFYDIGSSEMNVDMAIEMYDGNHRVLKVDAPIVEGSFIAAVK
                     LSIGGSIDDALAEIKQSF"
     gene            23187..23684
                     /locus_tag="OY092_000736"
     CDS             23187..23684
                     /locus_tag="OY092_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075705.1"
                     /translation="MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMM
                     FYTCILDMIKYEESSEMHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSL
                     LQMLLLHAIPTPVISDKKAFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELH
                     QRNAR"
     gene            24141..25208
                     /locus_tag="OY092_000737"
     CDS             24141..25208
                     /locus_tag="OY092_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075706.1"
                     /translation="MMMNKEATKIGFAYVGIVVGAGFSTGQEVMQFFTKYGLWAYLGV
                     IISGFILAFIGRQVAKIGTAFEATNHESTLQYVFGEKFSKVFDYILIFFLFGIAVTMI
                     AGAGATFEESYNIPTWLGALIMTLAIYVTLLLDFNKIVRALGVVTPFLIVLVVLIAGV
                     YLFKGHVSLAEVNQVVPEASIWKGIWFGTIYGGLAFSVGFSTIVAIGGDTEKRTVSGA
                     GAMYGGIIYTVLLALINFALQSEYPTIKNASIPTLTLANNIHPLIATVLSVIMLAVMY
                     NTILGLMYSFAARFTEPYSKNYHIFIIIMMVAGYLLSFVGFAELINKLYTIMGYVGLF
                     IVVAVIIKYFKRKNADKKHIA"
     gene            25359..26402
                     /locus_tag="OY092_000738"
     CDS             25359..26402
                     /locus_tag="OY092_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1075707.1"
                     /translation="MNRDNKWTMITALFITVISVLLAFHLKQHYDQTTNENHANKDKI
                     NIKNKNVRIYQNLTYNRVFPNSKLDIITPVDMSSNAKLPVIFWMHGGGYIAGDKQYKN
                     PLLAKIAEQGYIVVNVNYALAPQYKYPTPLIQMNQATQFIKENKMNLPIDFNQVVIGG
                     DSAGAQLASQFTAIQTNDRLRKAMKFDQSFKPSQIKGAILFGGFYNMQTVRETEFPRI
                     QLFMKSYTGEEDWEKSFKNISQMSTVKQSTKNYPPTFLSVGDSDPFESQNIEFSKKLQ
                     ELNVPVDTLFYDGTHHLHHQYQFHLNKPESIDNIKKVLLFLSRNTSSSGIQTEEKPQI
                     ENPSNELPLNPLN"
     gene            26731..27159
                     /locus_tag="OY092_000739"
     CDS             26731..27159
                     /locus_tag="OY092_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075708.1"
                     /translation="MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLK
                     DVFVSGVSIDHLWLYETNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIK
                     RKGRLITEEAYNQNNQYQDKIYEKLPDIDFRLEDFYSKEN"
     gene            complement(27368..27874)
                     /locus_tag="OY092_000740"
     CDS             complement(27368..27874)
                     /locus_tag="OY092_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075709.1"
                     /translation="MAHIIRRVSIKDVENFISMLAKIYDESPYMFYTPGEYDPSVTSA
                     SKQLEEYITSPHKVIFVAESDEQLVGFAFVNTTPFQRIKHVAKIDLGVKKLYQHRGIG
                     QALLDAIMAWCLNNQIHRIEANVPLNNQPALELFKSADFQIEGVLKDKLFIDGKYYDD
                     YMMAKILN"
     gene            27987..28910
                     /gene="graX"
                     /locus_tag="OY092_000741"
                     /gene_synonym="apsX"
     CDS             27987..28910
                     /gene="graX"
                     /locus_tag="OY092_000741"
                     /gene_synonym="apsX"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="auxiliary protein GraX/ApsX"
                     /protein_id="HCX1075710.1"
                     /translation="MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVE
                     MTWIQCDIFHYEQVVAAMNQVDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAA
                     INQVKKVIYIPGSRYDNETIERLGAYGTTVETTNLVFKRSLVNVELQVSKYDDVRSTM
                     KVVLPKGWTLKNVVNHFIAWIGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETA
                     DGIITLILLSGSLVKKYTVNQGKLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPM
                     QKMMIHGFEVDCRIKDFQSRLKSGENMKYTK"
     gene            28926..29600
                     /gene="graR"
                     /locus_tag="OY092_000742"
                     /gene_synonym="apsR"
     CDS             28926..29600
                     /gene="graR"
                     /locus_tag="OY092_000742"
                     /gene_synonym="apsR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor
                     GraR/ApsR"
                     /protein_id="HCX1075711.1"
                     /translation="MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFN
                     PEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPF
                     YTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
                     EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGK
                     GYMAHE"
     gene            29593..30633
                     /gene="graS"
                     /locus_tag="OY092_000743"
                     /gene_synonym="apsS"
     CDS             29593..30633
                     /gene="graS"
                     /locus_tag="OY092_000743"
                     /gene_synonym="apsS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase GraS/ApsS"
                     /protein_id="HCX1075712.1"
                     /translation="MNNLKWVAYFLKSRMNWIFWILFLNLLMLGISLIDYDFPIDSLF
                     YIVSLNLSLTMIFLILTYFKEVKLYKHFDKDKEIEEIKHKDLAETPFQRHTVDYLYRQ
                     ILAHKDKVVDQQLQLNMHEQTITEFVHDIKTPVTAMKLLIDQEENQERKQALLFEWSR
                     INSMLDTQLYITRLESQRKDMYFDYVSLKRMVIDEIQLTRHISQVKGIGFDVDFKVDN
                     HVYTDIKWCRMIIRQILSNALKYSENYNVDISTELIDQHVALIIKDHGRGISKKDMPR
                     IFERGFTSTANRNETTSSGMGLYLVDSVKDQLGIQLQVTSTIGKGTTVKLIFPLQNEI
                     VERMSEVTNLSF"
     gene            30780..31541
                     /gene="vraF"
                     /locus_tag="OY092_000744"
     CDS             30780..31541
                     /gene="vraF"
                     /locus_tag="OY092_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000153733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein VraF"
                     /protein_id="HCX1075713.1"
                     /translation="MTILEVKQLTKIYGNKKMAQEVLRDINLSVEEGEFIAIMGPSGS
                     GKTTLLNVLSSIDYISQGSITLKGHKLEKLSNKALSDIRKHDIGFIFQEYNLLHTLTV
                     KENIMLPLTVQKLDKDTMLDRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFIT
                     LPSIIFADEPTGALDSKSTQDLLKRLMKMNEEIKTTIIMVTHDPVAASYANRVVMLKD
                     GQIFTELYQGDDDKHTFFKEIIRVQSVLGGINYEF"
     gene            31531..33420
                     /locus_tag="OY092_000745"
     CDS             31531..33420
                     /locus_tag="OY092_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075714.1"
                     /translation="MSFNEIIFKNFRQNLSHYAIYLFSLITSVVLFFSFVALKYTHSI
                     NITETYPIIKEGSQVGSYFLFFIIIAFLLYANLLFLKRRSSELALYQTLGLSKYNIIY
                     ILMFEQLLIFSITAILGITIGIFGSKILLMIVFTLLGIKEKVPIIFSFKAVFETLLLI
                     GVAYFLTAAQNLILVLKQSISELSKHNQAKQMNHNKITFEEVILGILGIILIISGYYY
                     SLRIVHYYDAFGVLMFILFATVIGAYLFFKSSVSLVFKIIKRFKKGVISVNDVMFSSS
                     IMYRIQKNAFSLTVMAIISAITLSVLCFAAISRATLSSEIKYTSPHDVTIKDQQKANQ
                     LASELNNQKIPHFYNYKEVIHTKLYKDDLFDIKAKEPYNVTITSDKYIPNTDLKRGQA
                     DLFVAEGSIKDLVKHKKHGKAVIGTKKHHVDIKLRKDINKIYFMTDVDLGGPTFVLND
                     QDYQEIRKYTKPKHIVSQFGFDLKHKKDMLALEKATNKVDKSIETRSEAISSISSLTG
                     ILLFVTSFLGISFLIAVCCIIYIKQIDETEDELENYSILRKLGFTQKDMAKGLKFKIA
                     FNFGLPLVIALSHAYFTSLAYMKLMGTTNQIPIFIVMGLYICMYAIFAITAYNHSKRT
                     IRHSI"
BASE COUNT        11764 a         4722 c         6022 g        11245 t
ORIGIN      
        1 aaacattaga gtctttagta gatgaaggac aaataacgaa tagtgtactt gaaaactata
       61 tgcgttatgc tgaaagaaca caagtatata gacaagcatc attaataaga agaatgattg
      121 tattattacg aggtgcttta ttaaaacgaa gagtacaaac gagagtgaac tcggcatctt
      181 cacttagtgt tacggataac ttaatggaat taaataaaat taataaatta gtccattata
      241 atgtggttag tcgattgtct aaggaaacaa caaaagataa tacacttgaa gttggaatgg
      301 tttgtgacgg ttatttaatg cgaattgaaa acttaacacc atctaatttc ttcaactcag
      361 caagtgaaga tacgattact aaaattaaat taaatgcatt gagagaacaa cgtcgcattt
      421 tacgtgagtt gattgataca gatgaagtat cagaaggtac agcgttaaaa ctaagagagg
      481 ccattaatta tgatgaaatg gttattgtag atagtatgac gtagttcgta attatgctaa
      541 aagggattga tgaaaaaatg aatggctttt catcaatccc ttttatttta ggggaattga
      601 atagatagtt ttaaactata cgaattatta atatttgaga attaattgaa ataagtttta
      661 aaaattggag gagatagatt aatcgaagtc atttaaatta agaagatacg tgcattcaca
      721 aaaaatagcc acactcatat gacatcggat gagtgtggct taaggatcta tggggggagg
      781 aaaccataga tgtttacttt gataggccag attaaatatc aaagtatgcg attatttata
      841 gcttgatgca aaagtggtat gcctattaaa agttactgca catagctttt aatattccgt
      901 tcaaaggaaa ggggcataca attgaacaat ctgtaatagt acttttaacc agctatgcta
      961 aaagtctagt agggagaaca gttgtccaat cacataagaa cctctaactt cgttagtacg
     1021 attaagaaaa gctttttagt tagtatgtaa tacaatttat tgacgcgcgt gaatctcttt
     1081 tataagagtg tgtagggaat ggcgttgtat aaattgtatt agaagaactt ctaacgcatc
     1141 tctgtggtta aaagagatga agggaacgac agtttaatta aaactgcata agaacttcta
     1201 gcttttctct ttcgttcaaa gagaagttct aataccacca tatcgtgcga tcgggaacgg
     1261 tatatatatt aataggaggg taatatatat ttaacgcacg atatgggact attagccttc
     1321 gactttgtta tgttgatgtg tggcctaaaa tattggagat accaatattt taggttgcat
     1381 caacatcaat tcatcttact tcattaaaac acagcgtgtt atttcatgct tccgtgtaca
     1441 gtatcaatat ttgatttcat cattttgtag taagagtcac ctttagtgcc ttctttaccg
     1501 attgaatctg tgtacacttc accaaagata tctttcttcg tttcttcaga taaactttcc
     1561 attgctttct tatcaacact tgtttctact aataagtgtt ttaatttgtg ctttttaaca
     1621 aactcaatag cttgtctcat ttgttcaggt gtaccttgtt tttcagtgtt aatttcccaa
     1681 atataacctg gtgtaatacc gtattgtttt gagaagtact tgaaggcacc ttcacttgta
     1741 atcatggcac gttgttcttt tggaatgtca ttaaatttgt ctttactgtc attatttaat
     1801 ttttccaatt gagcaatgta tttgttacct tgcttttcat aatctgcttt atgttttttg
     1861 tcgttatcga taaatgtttg ttgaattgtt tttacgtatt taataccgtt atctaaactt
     1921 aaccatgcgt gtggatcttg tttatctttg ttgccttctt caccgtttaa atagataggt
     1981 ttaacatctt ttgatactgc gataactttt ttatctttta atgatttacc agcctgttct
     2041 aaggcttttt caaaccaacc gttaccagtc tctaaattta atccgttgta taaaataacg
     2101 tcagcgtcag ttaacttttt aatatcttta ggtttaactt catattcatg aggatcttga
     2161 ccaacaggta caatactatg aatatcgacg ttgtctccac caacattttt agccatatca
     2221 tataaaattg aattcgtcgt tactactttt aatttgccat ttgacttatc actgctttgt
     2281 ttaccaccag taccacatgc agcaactaga agtaataagg ctaataataa aggtactaat
     2341 tttttcatgt taaacttcct cgtttctttc tattcgtaaa ttttgtgaaa aataatgtga
     2401 tgatataaat tacaaacgta caaagtacga ttgtcgcacc actaggaatg ttgtaaatat
     2461 agctgtaata aagtccgaca attgaactta tgacacttat taaacttgct ataatcatca
     2521 ttgagtatag ttttttacta attaaaaatg ctgtagatgc aggtgtaatt aataatgcaa
     2581 ctacaagaat aatacctacc gtttgaatac ttgctactgt tactaatgag agtaacaaca
     2641 tcacaaagta atgtaataac gtcgtattta gaccactcat tctactaaac gttggatcga
     2701 atgtagaaat cattaatgga cgatagaaaa taatgattag aataaggacg attgaaccaa
     2761 tcacaatagt tgttaaaaat gcactatttg tgattgccag taaattacca aacagaatat
     2821 ggtacaaatc tgtcgtagtg tttattaagc taataataat aatccccgaa gctaagaaag
     2881 cggtaaaact aattccaata gcggcgtcag gtttcgtttt actactagat gtgatataac
     2941 cgataaaaat acttgcgatc ataccagtta taagtgcgcc tacaaacatt ggaataccaa
     3001 ataagaatga tagggcaaca ccaggtaata ctgcgtgact cattgcatct cccattaatg
     3061 aaagaccacg taatacaatt aaactaccaa ctgtaccaca aactatccct acaataattg
     3121 aagttatcaa tgctcgattc aagaattgat atgtaaataa atgttcgaca aactctaaca
     3181 tgttatattg ctcctttgac tagggtcact acagtcagtg ctactcataa atgtttcgtt
     3241 taagcgagtg acactcatag cctcttcact atcaccgaag tatcgtaatg tttgatttaa
     3301 tagaataatg cgatcaaagt attgctttgc ttttgataga tcatggtgga tgataagaat
     3361 aagttttcct tgttgtttta agttctcgat ttttgtcatg attaattttt cgctactaaa
     3421 atcaattccg acaaacggct catctagaaa ataaacttca ctttcggaca tcaatgctct
     3481 tgctactagc acacgttgta attgtccacc acttaattct gaaatttgtc gatgacgtaa
     3541 agattctaat tctaaatcgc ttaataactg tttgagttta tcccttgctg atttattatg
     3601 tcgtctaaac catccaattt ctttgtagca acctgataaa atcacttgtt ccacacttat
     3661 aggaaaatct aaatcaatat gtgctttttg tggaatatat gtaatatgtt gcagttgttg
     3721 ttgtataggt ttgttatata acaatttagt accggtagca ttaaattcac caattaaaga
     3781 cttgataagg gaagatttac cagcaccatt cgggcccatg ataccaatta tttcgccgcg
     3841 tactggtatc gataaggaaa tgtttttaag tacatgctta ttacctaaaa acagatttaa
     3901 atcttttgtt tctaacaaac gtttatacct cctaattaaa agtttaggct aacctaatta
     3961 attgtataat aaactgagaa tatttatcat gtcaagtaaa ttcgtgatat aatatagaca
     4021 atgtatgtga ggtgaaagta tgttaactga agaaaaagag gactatttaa aggcaatcct
     4081 tacgaataat ggcgataaaa actttgtgac aaataaaatc ttatctcaat ttttaaatat
     4141 taagcctcca tctgtaagtg aaatggtagg acgtcttgaa aaagcaggct atgttgaaac
     4201 aaaaccatac aaaggtgtta gattaacaga ggatggttta acgcatacgc ttgatatcat
     4261 taagagacat cgactattag aattattttt aatagaaata ttgaaatata attgggaaga
     4321 agtacatcaa gaagcagaaa ttttagaaca tcgaatttca gatttatttg ttgaaaggct
     4381 ggatagcctg ttaaatttcc cagaaacttg cccgcacggc ggtgtgattc ctagaaataa
     4441 tgaatataaa gagaaatata taacaacgat tttgaattat gaacctggtg atatcgttac
     4501 aatcaaacgt gtgagagata agaccgattt gctaatatat ttgtctagta aagatatttc
     4561 tattggtaat gaagtggaaa ttgtatcgaa agatgaaatg aataaagtaa ttattattaa
     4621 acgtaatgat aatgtaatta ttgtcagtta cgaaaatgca atgaacatgt ttgctgaaaa
     4681 ataaaataaa gaagccataa agatatccat gattgtactg ataaagacat atggataatt
     4741 gctttaggct tcttttttat tagttaattt atcaagtgag tatatttgag taaaatattc
     4801 actgcataaa gattgaagat aatccagatt gtactataaa tgaagatagg tacatgactg
     4861 agttctttaa gtgcactacc atcccactgt ggactcggac gctggaaagt caatttagca
     4921 atcgtccaac tagattgtag aacttcgcct aataatacac ctaaaatata ttgataactc
     4981 attgtgacaa gtagttgaat ttctactata ttttcatctt ttaatataaa atacaacatg
     5041 atagaaatta aagttataac aacaatgggt gagccttttc tagatgttaa aattaaaaaa
     5101 taaataaata tcaataagta ggtaaatata aagaaactag gtatctgata atggctcgac
     5161 gctaaaccta tcaataacat aataggtggc ataaaataac caccaatcgt tgtaagccat
     5221 tggcctgcta gatgtctaga ttgtgtaatt gcgaatcctt gttgtaatgt ctgttgtcgc
     5281 tctcgtggac ttgttacaat gactaaatct tttgcacggc caccagcgag tttattaaac
     5341 aatacatgac caaattcatg tgttaaaaca gggatatagt ttaaaatgac atctaaatag
     5401 ttcaaaacag ccttatgtct atattgatga atagcaatat aacaagctgc aacaataacg
     5461 ataatgtata tattaagttg aattgtcgta ttaaaaaagt ttgataaata attcattgtt
     5521 aacctcatat aagatattaa tttaaagttt gcttatcact tattataaat gatattggca
     5581 ttaatagcgt tagactttag acttacctta gttaaactaa ttttaatttt tgaaaaggtg
     5641 aatatgtgtt aaaataaagc aaaatcattt cgatataaat aggataaata taaatactgt
     5701 taatattgat tacactaaca taataatgaa ataagatagg agattcctgt tatgactgtt
     5761 gaagaaagat ccaatacagc caaagttgac attttagggg tcgattttga taatacaaca
     5821 atgttgcaaa tggttgaaaa tattaaaacc ttttttgcaa atcaatcaac gaataatctt
     5881 tttatagtaa cagccaaccc tgaaatagtg aattacgcga cgacatatca agcgtattta
     5941 gagttaataa atcaagcgag ctatattgtt gctgatggga caggagtagt caaagcttcg
     6001 catcgtttaa agcaacctct agcgcatcgt atacctggta ttgagttgat ggatgaatgt
     6061 ttgaaaattg ctcatgtaaa tcatcaaaaa gtatttttgc taggggcaac taatgaagtt
     6121 gtagaagcgg cacaatatgc attacaacaa agatatccaa acatatcgtt tgcacatcat
     6181 cacggttata ttgatttgga agatgagaca gtagtgaaac gaattaaact gtttaaacct
     6241 gattacatat ttgtaggtat gggattccct aaacaagaag aatggattat gacacatgaa
     6301 aaccaatttg aatctacagt gatgatgggc gtaggtggtt ctcttgaagt atttgctggg
     6361 gctaaaaaga gagcgcccta tatctttaga aaattaaaca ttgaatggat atatagagca
     6421 ttaatagatt ggaaacgtat tggtagatta aagagtattc ctatatttat gtataaaata
     6481 gccaaagcaa aaagaaaaat aaaaaaggcg aaataatcat gatgacaaaa ataaaaccga
     6541 ggaaatcctt aaatggagat tctcggtttt ttcggtttat ttaataacga agcgggactc
     6601 atcgagtttg tttctaaatt ctttttgttc ggctttggat ttctttttaa aatcgtttag
     6661 gaaagcttca tatttaggta atacatcatc aagttcaccg taatctttta actttccgcc
     6721 ttcaatccaa gcaatcttag tacaaaattg tctcacttgg cctaagttat gactaacgaa
     6781 aaagatggtt ttgttttgct ctttaaactc gtaaatttta tctaaacatt tttgtgcaaa
     6841 agtttggtca cctacagata aagcttcgtc aatgactaag atatctggat taactgtgat
     6901 attaattgaa aaaccaagtt ttgcacgcat accacttgaa tactttttaa ctggttgata
     6961 aataaactca ccaagttcac taaattcaat aatcttaggt gtcatcgctt taatttcttt
     7021 tcgcttaaag cccatacata acattttaaa ttcgatattt tcaatccctg taagttgtcc
     7081 actcaagcca gcactaattg cgataacgct gacttcacca ttacgatcca ctttgccaac
     7141 agtaggcgac aaagaaccgc caatgatatt gctcaacgtt gatttgccgg aaccattgat
     7201 gccaacaagc cctatgacgt caccttcata tgcttttaaa ctaatgtcat ctaaagcgaa
     7261 aaatgttttg tttttatgtt tgggaatgag cgcatctttc atacgttctt tatttgtacg
     7321 ataaatacga tattcttttg ttacattttt aatgtttacc gaaacgttca tttgtagacc
     7381 ttccttattc acatttatct agattataat atactactca acagttgtta aattttaaaa
     7441 cctgttgtaa agtgtataga agattttgtt attatcagag ttggtgtttt gacacaaaat
     7501 gttaatcatc aatgataaca atgatattta aaaactaaac ttatttcaac ttacatgatt
     7561 gtatactata atgtatttgt aataaactaa tattttaaag aactagacaa taattttgat
     7621 agcatccatg tatagtgata gtatttacaa caattattat aatactattt agttaagtag
     7681 agaaatagtt aaacatttga aagtgtggtt taatggaatg tcagcaatag gaacagtttt
     7741 taaagaacat gtaaagaact tttatttaat tcaaagactg gctcagtttc aagttaaaat
     7801 tattaatcat agtaactatt taggtgtggc ttgggaatta attaaccctg ttatgcaaat
     7861 tatggtttac tggatggttt ttggattagg aataagaagt aatgcaccaa ttcatggtgt
     7921 accttttgtt tattggttat tggttggtat cagtatgtgg ttcttcatca accaaggtat
     7981 tttagaaggt actaaagcaa ttacacaaaa gtttaatcaa gtatcgaaaa tgaacttccc
     8041 gttatcgata ataccgacat atattgtgac aagtagattt tatggacatt taggcttact
     8101 tttacttgtg ataattgcat gtatgtttac tggtatttat ccatcaatac atatcattca
     8161 attattgata tatgtaccgt tttgtttttt cttaactgcc tcggtgacgt tattaacatc
     8221 aacactcggt gtgttagtta gagatacaca aatgttaatg caagcaatat taagaatatt
     8281 attttacttt tcaccaattt tgtggctacc aaagaaccat ggtatcagtg gtttaattca
     8341 tgaaatgatg aaatataatc cagtttactt tattgctgaa tcataccgtg cagcaatttt
     8401 atatcacgaa tggtatttca tggatcattg gaaattaatg ttatacaatt tcggtattgt
     8461 tgccattttc tttgcaattg gtgcgtactt acacatgaaa tatagagatc aatttgcaga
     8521 tttcttgtaa tatatttata tgacgaaacc ccgctaacca ttaataaatg gaagtggggt
     8581 tcatttttgt ttataattta agtaaataac atattaagtt ggtgtattat gaacgtttta
     8641 ataaagaaat tttatcattt ggtagttcga atactttcta aaatgattac gcctcaagtg
     8701 attgataaac cgcatatcgt atttatgatg acttttccag aagatattaa gcctatcatc
     8761 aaagcattaa ataattcgtc gtatcagaaa actgttttaa caacaccaaa acaagcgcct
     8821 tatttatctg aacttagcga cgatgttgat gtgatagaaa tgactaatcg aacattggta
     8881 aaacaaatta aggctttgaa aagcgcgcag atgattatta tcgataatta ttacctatta
     8941 ctaggtggat ataataagac ttctaatcaa cacattgttc aaacgtggca tgcaagtggt
     9001 gcattaaaaa actttggatt aacagatcat caagtcgatg tgtctgacaa gggaatggtt
     9061 cagcagtacc gtaaagttta tcaagcgacg gatttttact tagtgggttg tgaacaaatg
     9121 tcacaatgtt ttaaacagtc tttaggtgca acagaagagc aaatgttgta ttttgggctt
     9181 ccgagaatta ataaatatta cacagctgat agagcaacgg ttaaggcaga gttaaagcat
     9241 aaatatggaa ttacaaataa gttggcatta tatgtaccaa catatagaga agataaagca
     9301 gataataggg ctattgataa agcttatttt gaaaactgtt taccaggata tacactgatt
     9361 aataaattac atccatcaat tgaacattca gacattgatg acgtatcttc aatcgacacg
     9421 tctacattaa tgctaatgtc agatataatt attagcgact atagttcgct gccaatagaa
     9481 gctagcttgt taaatattcc aactatattt tatgtgtatg atgaagaggc atatgataaa
     9541 gtgagaggcc tgaatcaatt ttacaaagca ataccggata gctacaaagt gtatactgaa
     9601 gaagatttaa taatgacgat acaagaaaaa gaacatctat taagtccgtt atttaaagat
     9661 tggcataagt ataatactga taaaagttta catcagctca cagaatatat agataagatg
     9721 gtgacaaaat gaggcttacg ataatcatac ctacatgtaa taatgaggca acaattcgac
     9781 aattgttaat atctattgag agtaaagaac actatagaat cctttgtatt gatggaggtt
     9841 ctaccgatca aacaattcct atgattgaac ggttacaaag agaactcaag catatttcat
     9901 taatacaatt acaaaatgct tcgatagcta cgtgtattaa taaaggtttg atggatatca
     9961 aaatgacaga tccacatgat agtgacgcat ttatggtcat aaatccaaca tcaatcgtat
    10021 tgccaggtaa attagatagt ctaactgcag ctttcaaaaa taatgataat attgatatgg
    10081 taatagggca gcgagcttac aattaccatg gtgaatggaa attgaaaagt gctgatgagt
    10141 ttattaaaga caatcgaatc gttacattaa tggaacaacc agatttgtta tcaatgatgt
    10201 cttttgacgg aaagttattc agtgctaaat ttgctgaatt acagtgtgac gaaactttag
    10261 ctaacacata caatcacgca atacttgtca aggcgatgca aaaagctacg gatatacatt
    10321 tagtttcaca gatgattgtc ggagataacg atatagatac acatgctaca agtaacgatg
    10381 aagattttaa tagatatatc acagaaatta tgaaaataag acaacgagtc atggaaatgt
    10441 tactattacc tgaacaaagg ctattatata gtgatatggt tgatcgtatt ttattcaata
    10501 attcattaaa atattatatg aatgaacacc cagcagtaac gcacacgaca attcaactcg
    10561 taaaagacta tattatgtct atgcagcatt ctgattatgt atcgcaaaac atgtttgaca
    10621 ttataaatac agttgaattt attggtgaga attgggatag agaaatatac gaattgtggc
    10681 gacaaacatt aattcaagtg ggcattaata ggccgactta taaaaaattc ttgatacaac
    10741 ttaaagggag aaagtttgca catcgaacaa aatcaatgtt aaaacgataa cgtgtacatt
    10801 gatgaccata aactgcaatc ctatgatgtg acaatatgag gaggataact taatgaaacg
    10861 tgtaataaca tatggcacat atgacttact tcactatggt catatcgaat tgcttcgtcg
    10921 tgcaagagag atgggcgatt atttaatagt agcattatca acagatgaat ttaatcaaat
    10981 taaacataaa aaatcttatt atgattatga acaacgaaaa atgatgcttg aatcaatacg
    11041 ctatgtcgat ttagtcattc cagaaaaggg ctggggacaa aaagaagacg atgtcgaaaa
    11101 atttgatgta gatgtttttg ttatgggaca tgactgggaa ggtgaattcg acttcttaaa
    11161 ggataaatgt gaagtcattt atttaaaacg tacagaaggc atttcgacga ctaaaatcaa
    11221 acaagaatta tatggtaaag atgctaaata aattatatag aactatcgat actaaacgat
    11281 aaattaacgt aggttattat aaaataaata taaaacggac aagtttcgca gctttataat
    11341 gtgcaacttg tccgttttta gtatgtttta ttttcttttt ctaaataaac gattgattat
    11401 catatgaaca attagtgcta atccagcgac taggcatgca ccaccaatga tagtgaataa
    11461 tggatgttct gcccacatac ttttagcaac agtatttgcc ttttgaataa ttggctgatg
    11521 aacttctaca gttggaggtc cataatcttt attaataaat tctcttggat agtccgcgtg
    11581 tactttacca tcttcgacta caagtttata atctttttta ctaaaatcac ttggtaaaac
    11641 atcgtaaaga tcgttttcaa cataatattt cttaccattt atcctttgct cacctttaga
    11701 caatattttt acatatttat actgatcaaa tgagcgttcc attaatgcat tccccatcat
    11761 attacgttgc ttctcgccac caaggttttt atagtctccc gcacccatga taacttgatt
    11821 aattctaaat ttacctcgtt tggtagtaat cgtatggttg taatttgctg tatcacttga
    11881 tccagttttt aaaccatctg taccaggcaa actcattttt gcaccttcca atgaaaagtt
    11941 gaatgtgtaa tacgtaactg catgcgttgt tggtgctaac tgctttgtaa agtctaatat
    12001 tttaggtgtc tctttaatca cgtgtaaatc taaaatggca tagtctctag cagtcgttac
    12061 agtacgttct tggtctttat actttgttgg tgcaaatgta cgtaatcttg aattttcagc
    12121 acccgttgga ttgacgaaat gtgtattttt cattccgata gctttagctt tgttattcat
    12181 taaatcaacg aaatcgctgg tgttttttga taccttctta gctaaaatta atgccgcggc
    12241 attactagaa ttagatactg taatttgtaa taggtctgcg attgtccata cttgtccagg
    12301 atatagtttc gtattactca actcaggtag tgtagacata atatattctt tgttcgtcat
    12361 tgtgacagtt tcatcaagtg aaagctgccc cttatttaca gcttccaatg ttaagtacat
    12421 tgtcattaat ttagtcatag acgctggatt ccacttagta tcgatattgt attgatacag
    12481 taattgtcca gtttgactaa cattaacagc actcgtcggt tcgtatgcag ccgacaaacc
    12541 tgcataacca tattgatttg ctgcttgtac aggggttacg tcactgttag cagcttgtgc
    12601 atatggtgtc ataatactta atgttaaaca taaaatgatg ataatagata ttaaattttt
    12661 cataaagcgt taatcttccc ttttccaatt cttaaatatt ccctaaaagc aatggtcatt
    12721 cctaattacg gaaatcattg ctaattcact tcaccttaat taaattgttg aaaattaagt
    12781 ttcttgcggt ttatttgaaa aataatgcaa atatattacg tgtgtagcta aaggtgttat
    12841 aatgtttgta cgaagagcaa acttactcaa aagcgattaa ttatcatgtt ttaatataaa
    12901 aactttgaga agttattaca aaaaatgcaa tagaaatatt ctatcatata aatgttatga
    12961 acggtatttt ggggcaatac tttatttgat ttttaaagtt ttgttgggag aaagtatatg
    13021 atagaaatgc atgtatctat ctaaatgaat taactataaa tttcaaacaa aagaggtaaa
    13081 actatgaaac gagaaaatcc attgtttttc ttatttaaaa aactatcatg gccagtgggt
    13141 cttatcgttg cagctatcac tatttcatca ctagggagct taagtggact attagtgcca
    13201 ctgtttactg gacgaattgt agataaattt tccgtgagcc atatcaattg gaatctaatc
    13261 gcattatttg gtggtatctt tgtcatcaat gctttattaa gcggattagg tttatattta
    13321 ttaagtaaaa ttggtgaaaa aattatttac gcgatacgct cagttttatg ggagcatatc
    13381 atacaattaa aaatgccatt ctttgataaa aatgaaagtg gtcaattaat gagtcgatta
    13441 actgacgata cgaaagtgat aaatgaattt atttcacaaa agctacccaa cttattacca
    13501 tcaatcgtta cattagttgg gtcactaatc atgttattta ttttagattg gaaaatgaca
    13561 ttattaacat ttataacgat accgatattt gttttaatta tgattcctct aggacgtatt
    13621 atgcaaaaaa tatcgacaaa tacacaatct gaaattgcaa actttagtgg tttgttaggg
    13681 cgtgtcctaa ctgaaatgcg tcttgttaaa atatcaaata cagagcgact tgaattagat
    13741 aatgcacata aaaatttgaa tgaaatatat aaattaggtt tgaaacaggc taaaattgcg
    13801 gcagttgtac aaccaatttc aggtattgtt atgttgctaa caattgcaat tattttaggt
    13861 tttggtgcat tagaaattgc gactggtgca atcactgcag gtacattaat tgcaatgata
    13921 ttttatgtta ttcaattatc gatgccttta atcaatcttt caacgttagt tacagactat
    13981 aaaaaggcag tcggtgcaag tagtagaata tacgaaatca tgcaagaacc tattgaaccg
    14041 acagaagctc ttgaagattc tgaaaatgta ttaattgatg acggtgtgtt gtcatttgaa
    14101 catgtagact ttaaatatga tgtgaagaaa atattagatg atgtgtcgtt ccaaatccca
    14161 caagggcaag tgagtgcttt tgtaggtcct tctggatctg gtaaaagtac gatatttaat
    14221 ctgatagaac gtatgtatga aattgagtca ggtgatatta aatatggcct tgaaagtgtc
    14281 tatgatatcc cgttatctaa gtggcgacgc aaaattggat atgttatgca atcaaattcg
    14341 atgatgagtg gtacaattag agacaatatt ttatacggaa ttaatcgtca tgtttcagat
    14401 gaagaactta ttaattatgc taaattagcg aactgtcatg attttatcat gcaatttgat
    14461 gaaggatatg acacgcttgt aggtgaacga ggattgaaac tgtctggcgg acaacgtcaa
    14521 cgtattgata ttgctagaag ttttgttaaa aatcccgata ttttgttact tgatgaagca
    14581 acagctaatc tcgatagtga aagtgaattg aaaattcaag aagctttaga aacattgatg
    14641 gaaggtagaa caacgattgt cattgcgcat cgtttgtcta caattaaaaa agccggtcaa
    14701 attatattct tagacaaagg acaggtaaca ggtaaaggta cgcattcaga actaatggca
    14761 tcacatgcga agtataaaaa ctttgtagtg tctcaaaaat taacagatta attttatata
    14821 tataagtaag cttggagcaa gtacagatat accatcgagg aaattaaagc gtggcacatt
    14881 gatggatata gatgttaata aattgcttca agcttttgtc tattttaaat catttgagaa
    14941 gttacgacat aataattctt aaattaatga aatcgatatt ttaagaaaaa aatgctcatg
    15001 gtataataca agttataagc aaacatacat atattaaata ctgtagccac gagtcataat
    15061 tcttcatatt ttacatagca atttaactga ttttagagtc cacggtacag aagtttgata
    15121 tttcaatgtt tctaaatttt taaaaaatta aatcataggt gggtgccaaa tgtttttatt
    15181 aatcaacatt attggtctaa ttgtatttct tggtattgcg gtattatttt caagagatcg
    15241 caaaaatatc caatggcaat caattgggat cttagttgtt ttaaacctgt ttttagcatg
    15301 gttctttatt tattttgatt ggggtcaaaa agcagtaaga ggagcagcca atggtatcgc
    15361 ttgggtagtt cagtcagcgc atgctggtac aggttttgca tttgcaagtt tgacaaatgt
    15421 taaaatgatg gatatggctg ttgcagcctt attcccaata ttattaatag tgccattatt
    15481 tgatatctta atgtacttta atattttacc gaaaattatt ggaggtattg gttggttact
    15541 agctaaagta acaagacaac ctaaattcga gtcattcttt gggatagaaa tgatgttctt
    15601 aggaaatact gaagcattag ccgtatcaag tgagcaacta aaacgtatga atgaaatgcg
    15661 tgtattaaca atcgcaatga tgtcaatgag ctctgtatcg ggagctattg taggtgcgta
    15721 tgtacaaatg gtaccaggag aactggtact aacggcaatt ccactaaata tcgttaacgc
    15781 gattattgtg tcatgcttgt tgaatccagt aagtgttgaa gagaaagaag atattattta
    15841 cagtcttaaa aacaatgaag ttgaacgtca accattcttc tcattccttg gagattctgt
    15901 attagcagca ggtaaattag tattaatcat catcgcattt gttattagtt ttgtagcgtt
    15961 agctgatcta tttgatcgtt ttatcaattt gattacagga ttgatagcag gatggatagg
    16021 cataaaaggt agtttcggtt taaaccaaat tttaggtgtg tttatgtatc catttgcgct
    16081 attactcggt ttaccttatg atgaagcgtg gttggtagca caacaaatgg ctaagaaaat
    16141 tgttacaaat gaatttgttg ttatgggtga aatttctaaa gatattgcat cgtatacacc
    16201 acaccatcgt gcggttatta caacattctt aatttcattt gcaaacttct caacgattgg
    16261 tatgattatc ggtacattga aaggcattgt tgataaaaag acatcagact ttgtatctaa
    16321 atatgtgcct atgatgctat tatcaggtat cctagtttca ttattaacag cagctttcgt
    16381 tggtttattt gcatggtaat atgttgaagt gtgacttcga taatacattt taactaataa
    16441 atatgttcag gcatgtcgtc tattgatata ggtgagatgc ttggactttt ttattattga
    16501 tataaagata tttaaatatt tttaaagtta ccgaaattga agcattataa aaaccaagtg
    16561 cacatggtaa tacacttggc ttttatggga aatgaatatt attgtacata tgacagtaag
    16621 gactaggtac agtcatagta cttcgagcaa aatttgtttt gttattataa acaacacaaa
    16681 ggagataact tctctattga agaagttaaa aacattatag cagacaatga aatgaaagta
    16741 aattaaaaat tcagaatatt tttaattatt atattgtgag tgatatttat aagggaaagc
    16801 tatttttcat ataaattagt taaatagtaa atctttgtta gaactctttc catagagttg
    16861 tgacagcatt tttgttgtgc tactattttt atagtctaat aaatatataa aggggatggt
    16921 ttcgtgaata aaacggttaa agatttaata ctagttgtct taggttcatt tatctttgct
    16981 gcaggtgtaa atgcatttat tatttctggt aacttaggtg aaggcggggt tacaggttta
    17041 gcaattattt tatattatgc gtttcatatt tcaccagcca tcactaactt cttggtcaac
    17101 gcagtattga ttgccatagg ttataaattt ttgagtaaga gaagtatgta cttaactatt
    17161 cttgtaacaa ttcttatttc aatatttttg agtttaacag aatcatggca agttgaaact
    17221 ggaaacagca ttgtgaatgc catttttggt ggtgtaagcg ttggactagg aatcggagta
    17281 attatccttg caggcggtac aacagcaggt acaacaattt tggcgagaat tgcaacgaaa
    17341 tacctcgatg taagcacgcc atatgctttg cttttcttcg atatgatcgt tgttgcaatt
    17401 tcacttacag ttattccact tgataaagta ttagtaacag taatatcact ttatatagga
    17461 acaaaagtga tggaatatgt catagaaggt ttaaacacta aaaaagctat gacgattatt
    17521 tcaactaatc ccgacaaact tgccaaagca atagacgagc aaattggaag aggtttaacc
    17581 attttaaacg gacatggcta ttatacgcgt gaagaaaaag atgtcttata cgttgttatt
    17641 tctaaaacac aagtttcaaa agcaaagcga ttaattaaac aaatcgataa agatgcattc
    17701 cttgtaattc atgatgtaag agatgtctat ggtaatggct ttcttgcaga tgaataaata
    17761 aatggtatga gcacacatac ttaaatagaa gtccacggac aagtttttga actatgaaga
    17821 cttatctgtg ggcgtttttt attttataaa agtaatatac aagacatgac aaatcgagct
    17881 atccaattta aaaagtaatg ttagtcaata agattgaaaa atgttataat gatgttcatg
    17941 ataatcatta tcaattgggg tgcctttgaa aattgataat ttaaaaatag aaattatttt
    18001 ttataaacag aaagaattta atgaaagtag ggaaattatg aatcgtttgc atggacaaca
    18061 agttaaaatt ggttacgggg ataacacgat tataaataaa ttagatgttg aaataccaga
    18121 tggcaaagtg acgtcaatca ttggtcctaa cggctgcggg aaatctactt tgctaaaggc
    18181 attgtcacgt ttattggcag ttaaagaagg tgaagtattt ttagatgatg aaaatattca
    18241 tacacaatct acgaaagaga ttgcaaaaaa aatagctatt ttacctcaat cacctgaagt
    18301 agcagatggc ttaactgttg gagaattagt ttcatatggt cgttttccac atcaaaaagg
    18361 atttggtaga ttaactgctg aggataagaa agaaattgat tgggcaatgg aagttacagg
    18421 aactgataca tttcgacacc gttcaatcaa tgatttaagt ggtggtcaaa gacaacgtgt
    18481 ttggattgca atggcattag cacaaagaac tgatattatc tttttagacg aaccaacaac
    18541 atatttagat atctgtcatc aattagaaat actagaatta gttcagaagt taaatcagga
    18601 acaaggttgt acaattgtca tggttcttca tgatattaac caagcgattc gtttctcaga
    18661 tcatcttatt gcgatgaaag aaggcgatat catcgctaca ggttcaacag aagacgtatt
    18721 aacacaggaa attttagaaa aagtttttaa tattgatgtt gttttaagta aagatcctaa
    18781 aactggaaaa cctttactgg taacttatga cttatgtcgc agagcttatt cttaattaag
    18841 taagttaata tgataaaaag gacaattaac atgacaaata gagagaatcc aacgccattg
    18901 aagtttttat actatattat aggtttaagt atgatactac taatcatact atttatttct
    18961 acattaatag gtgacgccaa aattcaagcc tctacaatta tagaggctat ttttaattat
    19021 aatcctagca atcagcagca aaacatcatc aatgagatta ggattcccag aaatatagca
    19081 gcagtaattg tgggtatggc gcttgcagtt tctggtgcga ttatacaagg tgttactcgt
    19141 aatggtcttg ctgatccggc gctcataggt ttaaattcag gtgcttcatt tgctttagca
    19201 ttaacatatg cagttttacc aaacacttca tttttaatat tgatgtttgc tggattttta
    19261 ggtgctattc taggaggggc tattgtatta atgataggcc gatctagacg tgatggattt
    19321 aatccgatgc gtattatttt agcgggtgca gcagtaagtg ctatgttaac agcgctaagt
    19381 caaggtattg cattagcttt tagactaaat caaacagtaa cattttggac tgctggaggc
    19441 gtttcaggca caacatggtc acaccttaag tgggcaattc cattaattgg aattgcgtta
    19501 ttcattatat taacaattag taaacaactt accattttaa atcttggtga atcattagct
    19561 aaaggtttag gtcaaaatgt aacaatgatc agaggcatat gtttaattat tgctatgatt
    19621 ctagcaggta tagcagttgc tatcgctgga caagttgcat ttgtaggttt gatggtacct
    19681 catatagcaa gatttttaat tggaactgat tatgctaaaa ttctaccatt aacagccttg
    19741 ttgggtggga tactcgtgct tgttgccgat gtgatagcac gatatttagg agaagcgcct
    19801 gttggtgcaa tcatttcatt tatcggtgtt ccttactttt tatatttagt taaaaaagga
    19861 ggacgctcaa tatgattagt tcaaataata aacgcagacg atggattgca ctggctgttt
    19921 ttagcattct actatttcta ggttgtactt ggagtatcac ctcaggtgaa tacaacatac
    19981 cagttgaaag atttttcaaa actttaattg gacaaggtga tgccattgat gagctaatct
    20041 tattagattt caggttacct cggatgatga ttactatttt ggcaggcgca gcgcttagta
    20101 ttagtggtgc aatagtgcaa agtgtcacaa aaaatccaat agctgaaccc ggtatattag
    20161 gtattaatgc aggcggcgga tttgcaatcg cattatttat tgcaattggt aaaattaatg
    20221 ctgacaactt tgtttatgta ctgccgttaa taagtatact aggtggtatc accgctgcat
    20281 tgattatttt tattttcagt tttaataaaa atgaaggtgt tacacctgcg agtatggtat
    20341 taataggtgt aggtttacaa acagcattgt atggtggctc aattacaatt atgtcaaaat
    20401 ttgatgataa gcaatctgat ttcatcgctg cttggtttgc aggtaatatt tggggtgacg
    20461 aatggccatt tgtcattgca tttttaccgt gggtgttgat tattattcct tacttactat
    20521 ttaaatcgaa tacactaaat attattcata cgggtgataa tattgcacga ggtctaggtg
    20581 taaggttaag cagagaacgt ttaatattat tctttatcgc agtgatgtta tcatctgctg
    20641 ctgtagcagt agcaggttca atttcgttta tcggattaat gggcccgcat attgccaaac
    20701 gtatcgttgg accacgtcac cagttgtttt taccaattgc cattttagta ggggcatgtt
    20761 tacttgttat agctgataca attggcaaaa ttgtattaca accaggtggg gttccagcag
    20821 gtattgtcgt agcaattatt ggtgcaccgt atttcttata tttaatgtac aaaacgaaaa
    20881 acgtatagtg tcaaaggaca caacatattg ctatgaaagg cactttatta taaggctttt
    20941 catagcattt tttatttaat gagtcactca agactattta ctttttcaat aatgaaccat
    21001 taagttatca agaggatctt atcaaaaata tatttgataa cggtatcagg ttaacccttt
    21061 atgatagcgc attcatttat tctgttttat actatgactg ataataccaa ggaggtacaa
    21121 catgatgaaa aagttaatca ataaaaaaga aacattttta actgatatgc ttgaaggatt
    21181 gttaattgcg cacccagagt tagatctgat tgctaataca gttattgtaa aaaaagataa
    21241 gaaagaacat ggtgtagcaa tagtctctgg aggtggaagc ggacatgaac ctgcgcatgc
    21301 cggttttgtt gcagaaggta tgctagatgc agcggtttgt ggcgaggtat ttacttcacc
    21361 tacaccagat aaaatattag aagctattaa agcagtagat acaggtgatg gtgtattact
    21421 agttgtgaaa aactatgcag gtgacgtgat gaattttgaa atggcacaag agcttgcaga
    21481 aatggaaggt ataaatgttg aaacagttat tgttcgtgac gacattgctg tgacaaatga
    21541 agcacaacgt cgtggtgttg caggaacagt gtttgttcat aagcttgccg gttatctttc
    21601 agaaaaaggg ctcgcattag gcgagattaa atcgcgtgta gaagcgttgt tacctgaaat
    21661 taaaagtatt ggtatggcaa ttgagccacc gcttgttcca actactggaa aatatggctt
    21721 tgatattgaa gacgacaaaa tggaaattgg cattggtata catggtgaaa aaggtattca
    21781 tagggaagaa gtaaaggata ttgatcatat tgttagaaca ttattagacg aattgtataa
    21841 agaagttact gccaatgagg tcatagtaat ggtaaatgga atgggaggta cgccgttatc
    21901 tgaattaaat atcgtaacta aatatattca acaaaattta actgcaagaa cggttaatgt
    21961 tgttaaatgg tttgttggtg attatatgac atctttagac atgcaaggtt tttctataac
    22021 tatcgtgcct aataaaccag aatatctgga agcattttta gcaccaacaa caagtcaata
    22081 ctttaaataa gcagtgaata tgaataaata tacatttatg aggtggcaca aatgaaagtg
    22141 aatgatatga aagcgcgttt attaaattta gaagaaacgt ttaaaaaaca tgaatctgaa
    22201 ttaactgaat tagatcgagc aattggtgat ggtgaccacg gggttaacat ggttcgaggg
    22261 tttagtagtc ttaaagaaaa acttgatgat agctcaatgc aatcattgtt caaatcgact
    22321 ggtatggcat tgatgtcaaa tgttggcggt gcatcaggac cactgtatgg ctttagcttt
    22381 gttaaaatgt ctgcagttac taaagatgat atggataatc aagatttcac tacactaatt
    22441 caagcatttg ccgaagcggt cgaatcacgt gggaaagtta ctttaaatga aaagacaatg
    22501 tatgatgtag tagcacgagc agcagagaag cttaaaaatg gtgaaacttt aacatttaat
    22561 gatttacaac aattagcaga taatacaaaa gatatggtag caacgaaagg tagagctgca
    22621 tattttggag aagaatcaaa aggttatata gatccaggtg ctcaaagtat ggtttatatt
    22681 ttaaacgctt tgataggaga tgaagataat gcctaaaatt atacttgtta gccatagtaa
    22741 agaaattgca aatggtacaa aatctttgtt aaagcaaatg gctggtgacg ttgatattat
    22801 accaatcggg ggattaccag atggttcaat tggaacttca tttgatatca ttcaagaagc
    22861 tttaactgaa ttagatgatg atgcaatgtg tttttacgat attggatctt cagaaatgaa
    22921 tgtagatatg gcaattgaaa tgtatgatgg taatcatcgt gtgttaaaag ttgatgcacc
    22981 aattgttgaa ggcagtttta tcgcagcagt aaagctgtca atcggcggtt caattgatga
    23041 tgcattagca gaaatcaaac aatcatttta gttaaaattt actaataatg aaaaatgtaa
    23101 acctttttca aatgaaactt tataaaaaat atgatagtat atatgtaaat gtttaataaa
    23161 atctggagaa ataggaggac attgccatgc aacaccttat aaaaaaacat gtattgaatg
    23221 gcgagtttga tttagtacga caattgatgt ccgaaacaga ttttatggaa tttgaagaag
    23281 catatatttc aagtgcgcat gaagtagaaa gtatgatgtt ttatacatgt attttagata
    23341 tgattaagta cgaagaatca tctgaaatgc atgacttagc atttttattg cttgtgtatc
    23401 cactaagtga atatgaaggt gctttggatt ctgcttatta tcatgcagac gcttccataa
    23461 aacttactga cggcaaagaa gttaaaagtt tgttacaaat gttattattg catgcgatac
    23521 caacacctgt tatttcagat aagaaggctt ttgatatcgc caagcaaatt ttaaaattag
    23581 atcctaataa taatgttgct cgtaacgtct taaaagacac tgccaaacgt atggacaacg
    23641 ttgttgttga tataaatgaa ttacaccaac gtaatgcacg ttaattacat ttcaattata
    23701 ttagcttaat aatagtttta acatttggtt gggttgggac atatgttcca gccttttttt
    23761 atacttaaaa actaacgaag tgtacttgtg tgcacaaatg gtttttatac aacattttat
    23821 aaatttatac attttaataa agaacatacg atagatggtt taaaccttat taactgagag
    23881 attttgatat gtatttttcg aaatttaact aaaaatacgt aagttaagaa gcacaattat
    23941 taatcatttt tcctatacaa aggttcgtat gactgcatta taaaagcata aatttataat
    24001 ttttttaaat gtcattgaac gtgataatgt gaatggattg agcaattttg aaaaagtgaa
    24061 aaataaccta tgtgacttgc aattaatttt cagtacgtta taatgcacac tgtgcaaaat
    24121 taaggaggtc tattattcac atgatgatga ataaagaagc aacaaaaatt ggatttgcct
    24181 acgtcggcat tgtagtgggc gcaggatttt caacaggaca agaagttatg caatttttca
    24241 ctaaatatgg cttgtgggct tatttgggtg tgattatatc tggttttatt ttagctttta
    24301 ttgggcgcca agtagcaaaa attggtactg cctttgaagc gacaaaccat gaatcaacat
    24361 tacaatacgt attcggtgaa aagtttagta aagtctttga ttatatttta atcttcttct
    24421 tatttggtat agctgtaacc atgatagctg gtgcaggcgc aacatttgaa gaaagttata
    24481 acatacctac atggctaggt gcattaatta tgacattagc aatttatgta acattgctat
    24541 tagactttaa taagatagta cgtgcccttg gtgttgttac accattttta attgttttag
    24601 ttgtattaat cgctggcgtt tatttattta aaggtcatgt ttcattagca gaagttaacc
    24661 aagtagtgcc tgaagcaagt atctggaagg gaatctggtt tggtacaata tatggtggat
    24721 tagctttttc tgtaggtttt agtaccatcg tagcaatcgg tggggatact gaaaaacgta
    24781 cagtgtcagg tgcaggcgcg atgtatggtg gtattatcta tactgtatta ctagcattga
    24841 tcaactttgc tttacaaagt gaatatccta caattaaaaa tgcatcaatt ccaacattaa
    24901 cattagccaa taacattcat ccgttaatag caaccgtgtt atctgttatt atgcttgcgg
    24961 ttatgtataa tactattcta ggactaatgt attcatttgc agcacgtttt acagaaccat
    25021 acagtaaaaa ttatcatatc tttattatta taatgatggt agcaggttat ttattaagtt
    25081 tcgtaggatt tgctgaatta attaataagt tatatacaat tatgggatat gtaggcttat
    25141 ttattgtagt agctgtaatt attaaatatt tcaaacgtaa aaatgcggat aaaaaacata
    25201 ttgcttaata tcatatgatg gatatccgaa actttacaat tgaatcactt tgttttaacc
    25261 ttaaaagcaa ttcgtctcta ctcttattgg gcgaattgct ttttatattt attcagtcta
    25321 ttaatatgag cgtctaacaa atagagaggt acgatgtaat gaatagagat aataaatgga
    25381 cgatgataac tgcgcttttt ataactgtaa tcagtgtatt gttagcattt catctgaaac
    25441 aacattatga ccaaactaca aatgagaacc atgctaataa agacaaaatt aatattaaaa
    25501 ataaaaatgt gcgcatttat caaaatctta catacaatag agttttccct aacagtaaat
    25561 tagatattat tacacctgtt gatatgtctt ctaatgccaa actgccagtt attttttgga
    25621 tgcacggtgg tggttatatt gcgggtgata agcagtataa aaacccatta ttagcgaaaa
    25681 ttgctgaaca agggtacatt gttgtgaatg taaattatgc attggcgcca caatataaat
    25741 atcccacacc attaattcaa atgaatcaag caactcaatt cattaaagaa aataaaatga
    25801 atttacctat tgattttaat caagtagtta ttggcggtga ttctgctggc gcacaactgg
    25861 ctagtcaatt tacggcaata cagacgaatg atcgcttaag aaaagccatg aaatttgatc
    25921 agtcattcaa accatcgcaa attaaaggtg ctatactatt tggtggtttt tataatatgc
    25981 aaacagttag agaaactgag tttccaagaa tacagttatt tatgaaaagt tatactggcg
    26041 aagaagattg ggaaaagagt tttaaaaaca tttcacaaat gtcgacagta aaacaatcga
    26101 caaaaaatta tccaccaaca tttttatctg ttggagatag cgatccattc gaaagtcaaa
    26161 atatagaatt cagtaagaaa ttacaagaat tgaatgtacc agtagatact ttgttttatg
    26221 atggtacgca tcatttacat catcagtatc aatttcacct taataaacct gaatcgatag
    26281 ataatatcaa aaaagtgtta ctgttcttaa gtcgtaatac atcttctagt ggtattcaaa
    26341 ctgaagagaa accacaaata gaaaatccga gtaatgaatt accgttaaat cctttaaact
    26401 aataataaac agtagtaatt tattacttaa acaacattta agaccttcaa attgaaaacg
    26461 aagaatttaa aacatgtggg gctaatgtgt aagagtctga gatataataa attgttagcg
    26521 gttctttatc atttctatct cactctatta tgatgtgaca tttattttac aaactaattt
    26581 gttttaaacc tgaaaataac tttttacaac taaatagtcg aaaaacagtg tgtacatgat
    26641 ataataaatt tataaattga aaagaattca aaagaaaaat taaaatatag attgagcacg
    26701 aagtgatttg aaataaggtt gtgaaaggga atgacaaggt cagcattaaa accatttaaa
    26761 aataaacgcg ttatggttac tggacgtata caacgtgttt tgtttaaaaa ttatttagat
    26821 agacatagca catttaagcc gaatgtaaga atattattaa aagatgtatt tgtttcaggt
    26881 gtatcaatag atcatttatg gttatatgag acaaataaat actatgcatt ggcaatggaa
    26941 cttattcatc aacgagtaaa atttagtgcg aatgttgtac cgtattacaa aataaataga
    27001 aataataatt tattcgtaca agattatgga attaagcgta aaggtaggtt aattactgaa
    27061 gaagcttaca atcaaaacaa tcagtatcag gataagatat atgaaaaatt accggatata
    27121 gattttagac tcgaagattt ttatagtaag gaaaactaaa caacatatat aaagcaccac
    27181 taaccgtagt tgatagttaa tcaattacac attagtggtg ttttattttg aatttaaatt
    27241 tgataaatga ataagagtat acgcattcat ttaaaattag atgacattga taaggatgag
    27301 taatgtatta ggtaaccatt aaattcgttg ttatgcgatt ctgatacaag attatgataa
    27361 aatagcttta attaagaatt ttagccatca tatagtcatc gtaatattta ccatcgataa
    27421 ataacttatc ttttaaaacg ccttcgattt gaaaatcggc acttttaaaa agctcgaggg
    27481 caggttggtt attgagtggt acatttgctt caattcggtg tatttgattg tttaaacacc
    27541 aagccataat ggcatcaaga agtgcttggc caattccacg atgttgatat aatttcttta
    27601 cacctaaatc aattttagca acatgtttaa tgcgttgaaa tggtgtcgta ttaacaaagg
    27661 caaagccaac gagttgttca tcactttcag caacaaagat gactttatgt ggagaagtga
    27721 tatattcttc taattgttta ctagccgatg tgacgctagg atcatattct cctggtgtgt
    27781 aaaacatata cggagattcg tcgtatattt tcgctaacat tgaaatgaaa ttttctacat
    27841 ctttgatact aactctacgt ataatatggg ccataaaaag cctccagtat tttgaaattt
    27901 taaaacattt gctactatta taatatatat ttaaccaaaa ggtagagtaa tatgtttttt
    27961 ggttacagtt taaaggagta ttttagatga aacctaaagt tttattagca ggtggaacag
    28021 ggtatattgg taagtattta agtgaagtga ttgaaaatga tgcggaactt tttgctatat
    28081 caaaatatcc agacaataaa aaaacagatg atgttgaaat gacttggatt cagtgtgata
    28141 tatttcatta cgaacaggtt gttgcagcaa tgaatcaagt agatattgct gtattcttta
    28201 tcgacccaac aaagaactct gccaaaataa cacaatcatc agcaagagat ttaacattaa
    28261 tcgcagcaga taattttggt cgagcagctg ctatcaatca agtaaaaaaa gtaatctaca
    28321 tacctgggag tcgttatgat aatgaaacaa ttgaacgcct aggtgcatat ggtacaactg
    28381 tagaaacaac aaatttagtt tttaaacgtt ctttagttaa tgtagaatta caagtttcaa
    28441 agtatgatga tgttagatca acgatgaagg tagttttacc aaagggatgg acattaaaga
    28501 acgttgtaaa ccattttatt gcatggatag gttatactaa aggaactttt gtgaaaacag
    28561 aaaaatcaca tgatcaattt aagatatata ttaagaataa ggtgcgaccg ctcgcagtat
    28621 ttaaaataga agagacagct gatggaataa taactttaat tttattgagt ggaagtttag
    28681 tgaaaaaata tacagttaat caagggaagt tagaatttag attaatcaaa gagtcggcag
    28741 tcgtttatat acatctatac gattatatcc ctcgattatt ttggccgatt tattacttta
    28801 tacaagcacc aatgcaaaaa atgatgattc atggctttga agttgactgc cggattaaag
    28861 attttcaaag tcgattaaaa tcaggagaaa atatgaaata tactaaatga tattgggtga
    28921 tatggatgca aatactacta gtagaagatg acaatacttt gtttcaagaa ttgaaaaaag
    28981 aattagaaca atgggatttt aatgttgctg gtattgaaga tttcggcaaa gtaatggata
    29041 catttgaaag ttttaatcct gaaattgtta tattggatgt tcaattacct aaatatgatg
    29101 ggttttattg gtgcagaaaa atgagagaag tttccaatgt gccaatatta ttcttatcat
    29161 ctcgtgacaa cccgatggat caagtgatga gtatggaact tggcgcagat gattatatgc
    29221 aaaagccttt ttatacaaat gtattaattg ctaaattaca agcgatttat cgtcgtgtct
    29281 atgagtttac agctgaagaa aaacgtacat tgacttggca agatgctgtc gttgatctat
    29341 caaaagacag tatacaaaaa ggtgatcaga cgattttcct gtctaaaaca gaaatgatta
    29401 ttttagaaat tcttattacc aaaaaaaatc aaatcgtttc gagagataca attatcactg
    29461 cattatggga tgatgaagca tttgttagtg ataatacgtt aacagtaaat gtgaatcgtt
    29521 tacgaaaaaa attatctgaa attagtatgg atagtgcaat cgaaacaaaa gtaggaaaag
    29581 gatatatggc tcatgaataa tttgaaatgg gtagcttatt ttttgaaatc tcgcatgaac
    29641 tggatatttt ggatattgtt tttaaacttg cttatgttag gcattagtct tatcgattat
    29701 gattttccaa tagacagttt attttatatt gtttctttga atttaagttt aacaatgatt
    29761 tttcttatat tgacatattt taaagaagta aaattatata agcattttga caaagataaa
    29821 gaaatagaag aaattaaaca taaagattta gcggaaacgc catttcaacg tcatacagtt
    29881 gattatttat atcgtcaaat tttagcgcat aaagataaag tggtcgacca acagttacaa
    29941 ttgaacatgc atgaacaaac cattacagaa tttgtgcacg acataaaaac acctgtgaca
    30001 gccatgaaat tattaattga ccaagaagag aatcaagaaa gaaaacaagc gctattattt
    30061 gaatggtcac gtattaactc gatgttagat acgcaattgt atattacgag attagaatct
    30121 caacgcaaag atatgtattt tgattacgtg tcacttaaac gcatggtcat tgatgaaata
    30181 caattaacaa gacatattag tcaggttaaa ggtattggtt ttgatgttga ctttaaagtg
    30241 gataatcatg tgtacacgga tataaaatgg tgtcgtatga ttattagaca gattttatca
    30301 aatgctttga aatatagtga gaattataat gttgatattt caacggaatt aattgatcaa
    30361 catgttgcgt taatcatcaa ggatcacgga agaggtatta gtaaaaaaga tatgcctcga
    30421 atatttgaac gtgggtttac gtcaacggct aacagaaatg aaacgacatc ctccggcatg
    30481 ggtctatact tagtggatag tgtgaaagat caattaggaa tacaattaca agtcacttcg
    30541 actattggaa aaggaacaac ggttaaattg atcttcccat tacaaaatga aattgttgag
    30601 cgcatgtcag aagtgacaaa tctgtcattt taaacatgcg ttttgttact tagaattgat
    30661 acatcatgac cacttcaacg atataatcaa atagatgtta attaaataca aaattgaagg
    30721 taagcgtgcc aaattgaata taaaggaaat gaagttaaga taaatatagg agtgttaaag
    30781 tgacaatatt agaagtaaaa caattaacaa aaatatatgg caataagaaa atggcacaag
    30841 aagttctgcg agatatcaat ctgtctgttg aagaaggtga atttattgct attatgggac
    30901 cttcaggatc tggtaaaacg accttattaa atgttttgag ttcaattgat tatatttcgc
    30961 aaggttccat cacactaaaa ggacacaaac ttgaaaagct ttcaaacaaa gcattatctg
    31021 atattcgaaa gcatgatatt ggttttattt ttcaagaata taatttactg catacattga
    31081 ctgttaaaga aaatatcatg ttaccattaa cggttcagaa attagataag gacacaatgt
    31141 tagatcgtta tgaaaaagtg gcagaagcat taaatatatt agacatcagt gataaatatc
    31201 catccgaatt gtctggtggt caaagacaac gaacatcagc tgccagagca tttataacat
    31261 tgccttctat tatatttgcc gatgaaccta caggtgcact cgattcgaaa agtacacaag
    31321 atttattaaa gcgattaatg aaaatgaatg aagagattaa gacgacgatt attatggtga
    31381 cacatgatcc ggttgcagct agctatgcaa atcgagtagt gatgcttaaa gatgggcaaa
    31441 tattcacgga gttatatcaa ggtgatgatg acaaacatac tttctttaaa gaaatcatac
    31501 gtgtacaaag tgttttaggt ggcattaatt atgagtttta atgagattat atttaaaaat
    31561 ttccgccaaa atttatcaca ttatgccatt tatctttttt cgctaattac aagtgtagtt
    31621 ttgtttttta gcttcgtagc actaaaatat actcatagca ttaacataac tgagacatat
    31681 cccattatta aagaaggatc gcaagtaggt agttactttc tattttttat cattattgcc
    31741 tttttgctat atgccaattt actatttctt aaacgtcgta gttctgaact tgcattatat
    31801 caaacattag gtttatccaa atacaacatt atatatatat tgatgtttga acaattatta
    31861 atattttcaa taacagctat attgggcatt acgattggta tctttggttc taaaatttta
    31921 ttaatgatag tgtttacttt attaggtatc aaagaaaagg ttccaattat tttcagcttt
    31981 aaagcagtgt ttgagacgct attattaatt ggcgttgctt atttcctaac tgcagctcaa
    32041 aatcttatct tagtattgaa acaatctatt tcagaactat caaagcataa tcaggctaag
    32101 caaatgaatc ataataaaat tacatttgaa gaagttatac taggaattct aggtattatt
    32161 ttaatcatca gtgggtatta ctactcttta cgcattgtac attactatga tgcatttggc
    32221 gtccttatgt ttatattgtt tgcgacagta attggggcgt atttattttt taaaagttca
    32281 gtatccctgg tatttaaaat tattaaaagg tttaaaaaag gtgtaataag tgtaaatgat
    32341 gtcatgtttt cttcatctat tatgtatcgt attcagaaaa atgcattttc acttactgtt
    32401 atggcaatta tttcagctat tactttatca gtactttgtt ttgctgctat cagtagagca
    32461 actttatcaa gtgaaattaa gtacacgtca cctcatgatg ttacgattaa agatcaacag
    32521 aaggcgaatc agttagcaag tgaattgaac aaccaaaaaa ttcctcattt ttataattat
    32581 aaagaagtga ttcatacaaa actttataag gatgacttat ttgatataaa agcaaaggaa
    32641 ccatataatg taacaattac tagtgataaa tatattccta atacggattt gaaacgtggt
    32701 caggctgatt tatttgtagc ggaaggctct attaaagatt tagtgaagca taagaaacat
    32761 ggtaaggcag tgataggaac gaaaaagcac catgtggata ttaaattacg taaagatatc
    32821 aataaaattt actttatgac tgatgttgac ttaggtggac cgacatttgt gttaaacgat
    32881 caagattatc aagagataag aaagtatact aagccaaaac acattgtttc tcaatttgga
    32941 tttgatttaa aacataaaaa agatatgtta gctttggaaa aagcaacaaa taaagttgac
    33001 aaatctattg aaacaagaag tgaagccata agttcgatat cgagtttaac gggaatattg
    33061 ttatttgtaa cctcattttt aggaattagt ttcctaattg ccgtatgttg tatcatatac
    33121 attaaacaaa tagatgaaac tgaagacgag ttagaaaatt atagtattct tagaaaactt
    33181 ggatttacac aaaaagatat ggcaaaagga ttaaaattta aaattgcgtt taattttgga
    33241 ttgccattag tcattgcact ttcacatgca tattttacat cattagcata tatgaaattg
    33301 atggggacaa cgaatcaaat accgatattt atagtaatgg gattatatat ttgtatgtat
    33361 gccatttttg caataacagc ttataatcat tctaagcgta caatcagaca ctcaatttaa
    33421 tatatatagc agctttcagt aggctagtga attaagattc atgagctata ctgaaagctt
    33481 ttatttttgg atagttataa atccgggcac gacagtttta atgtatatgt ttcaactttg
    33541 taaattgtat taaatgtgag aaaatagagc cataggcatt gaaagaaata tgaaataaga
    33601 atagttagaa gaaagataag tgagttttaa tatgtaaaag atatgtaata aatattgcat
    33661 cgttgtttaa tttccaacta tgtccattta caattattag agttttgtag ataacaaatt
    33721 gcctatatat caagtttttc aaaacaaatg cct
//
LOCUS       DAKPJH010000019        32961 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.019, whole genome shotgun sequence.
ACCESSION   DAKPJH010000019 DAKPJH010000000
VERSION     DAKPJH010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 32961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32961
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.019"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            54..185
                     /locus_tag="OY092_000746"
     CDS             54..185
                     /locus_tag="OY092_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075715.1"
                     /translation="MYGAYLINEYHQDFKSIANFKVLKRMINVMMCYCVLFLEPRIS"
     gene            complement(302..1165)
                     /locus_tag="OY092_000747"
     CDS             complement(302..1165)
                     /locus_tag="OY092_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose transporter"
                     /protein_id="HCX1075716.1"
                     /translation="MQFLDFLIALLPALFWGSVVLINVFVGGGPYNQIRGTTLGALIV
                     GLGLLITGFAKFNNPTVIIVGLISGALWAFGQANQLKSISLIGVSNTMPVSTGMQLVG
                     TTLFSVIFLGEWSSMTQIIFGLIAMILLVTGVALTSLKAKNERQSDNPEFKKAMGILI
                     VSTVGHVGFVVLGDIFGVGGTDALFFQSVGMAIGGFILSMNHKTSLKSTALNLLPGVI
                     WGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFILGERKDRRQMTGIWAGIIII
                     VIAAIILGNLK"
     gene            complement(1346..2233)
                     /locus_tag="OY092_000748"
     CDS             complement(1346..2233)
                     /locus_tag="OY092_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075717.1"
                     /translation="MSIVQLYDITQIKSFIEHSNYESASYLYKLPQQYNEIDVLITDA
                     IESPGVFSIKENDSIKAIILSFAYDKNKFKVIGPFVADNYVLSVDTFEKLFKAMTSNQ
                     PDDAVFNFSFEEGIQQYKPLMKVIQASYNFTDYYIEARTRLEEDMHQPNIIPYHKGFY
                     RAFSKLHTTTFKYQAQSPQDIIDSLDDHHHLFLFVSEGLLKGYLYLEIDSQQSIAEIK
                     YFSSHVDYRLKGIAFELLAYALQYAFDNFDIRKVYFKIRNKNNKLIERFNGLGFHINY
                     EYIKFKFESRNVKDQTIPE"
     gene            2299..2394
                     /locus_tag="OY092_000749"
     CDS             2299..2394
                     /locus_tag="OY092_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075718.1"
                     /translation="MILTCYNTFNTSFAIIEFKSKISGIDEARSK"
     gene            2420..4555
                     /locus_tag="OY092_000750"
     CDS             2420..4555
                     /locus_tag="OY092_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HCX1075719.1"
                     /translation="MKSLILAEKPSVARDIADALQINQKRNGYFENNQYIVTWALGHL
                     VTNATPEQYDKNLKEWRLEDLPIIPKYMKTVVIGKTSKQFKTVKALILDNKVKDIIIA
                     TDAGREGELVARLILDKVGNKKPIRRLWISSVTKKAIQQGFKNLKDGRQYNDLYYAAL
                     ARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVNTRQQEINQFKPQQYYTLSL
                     TVKGFDFQLESNQRYTNKETLEQMVNNLKNVDGKIKSVATKHKKSYPQSLYNLTDLQQ
                     DMYRRYKIGPKETLNTLQSLYERHKVVTYPRTDSNYLTTDMVDTMKERIQATMATTYK
                     DQARPLMSKTFSSKMSIFNNQKVSDHHAIIPTEVRPVMSDLSNRELKLYDMIVERFLE
                     ALMPPHEYDAITVTLEVAGHTFVLKENVTTVLGFKSIRQGESITEMQQPFSEGDEVKI
                     SKTNIREHETTPPEYFNEGSLLKAMENPQNFIQLKDKKYAQTLKQTGGIGTVATRADI
                     IDKLFNMNAIESRDGKIKVTSKGKQILELAPEELTSPLLTAQWEEKLLLIERGKYQAK
                     TFINEMKDFTKDVVNGIKNSDRKYKHDNLTTTECPTCGKFMIKVKTKNGQMLVCQDPS
                     CKTKKNVQRKTNARCPNCKKKLTLFGKGKEAVYRCVCGHSETQAHMDQRMKSKSSGKV
                     SRKEMKKYMNKNEGLDNNPFKDALKNLNL"
     gene            4668..6002
                     /locus_tag="OY092_000751"
     CDS             4668..6002
                     /locus_tag="OY092_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000800694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HCX1075720.1"
                     /translation="MKNYFQFDKYGTNFKREILGGITTFLSMAYILAVNPQVLSLAGV
                     KGVSEDMKMDQGAIFVATALAAFVGSLFMGLIAKYPIALAPGMGLNAFFAFTVVLTMG
                     IPWQVGLTGVLFSGIFFAILTVTGFREVIINAIPYQMKMAVSAGIGLFITFVGLQSSG
                     IIVKNESTLVTLGHLTDPPVLLAIFGIVITVILYAIKLPGSIFIGMIITAIVGMFTGL
                     IQMPSGIVGKIPSIEPTFGAAFEAFKDPSQLLTIQFLIVILTFLFIDFFDTAGTLVAV
                     ATQAGIMKDNKLPRAGRALFSDSLATIVGSVFGTTTTTSYIESTSGVAVGARTGFASI
                     VTGCCFLLALFFSPLIAVVTSAVTTPALVVVGVLMAANFAEINWKSFEVAVPAFITII
                     MMPLSYSIATGIACGFIFYPITMLISKKHKEVHPIMYVLMVLFILYFIFVHG"
     gene            complement(6193..6582)
                     /locus_tag="OY092_000752"
     CDS             complement(6193..6582)
                     /locus_tag="OY092_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075721.1"
                     /translation="MKNGPKLSLALIGIFLILCEFFYGIPFLGATFILSFGWQPLLFN
                     ALLYLILTIILLVNRQNAIRPIAIIPIFGIVGSFLAIIPFLGILIHWILFFLMILFVL
                     VVLSAPTYIPNKNARVIYTQYKDGHRE"
     gene            6939..7247
                     /gene="rpsJ"
                     /locus_tag="OY092_000753"
     CDS             6939..7247
                     /gene="rpsJ"
                     /locus_tag="OY092_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HCX1075722.1"
                     /translation="MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPT
                     EKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL
                     "
     gene            7275..7937
                     /gene="rplC"
                     /locus_tag="OY092_000754"
     CDS             7275..7937
                     /gene="rplC"
                     /locus_tag="OY092_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000160215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HCX1075723.1"
                     /translation="MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVD
                     GYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDAYEVG
                     QEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDA
                     SRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIKKG
                     NK"
     gene            7964..8587
                     /gene="rplD"
                     /locus_tag="OY092_000755"
     CDS             7964..8587
                     /gene="rplD"
                     /locus_tag="OY092_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HCX1075724.1"
                     /translation="MANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASL
                     RQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMP
                     KKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKKVLVVTENED
                     VNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKKVEEVLG"
     gene            8587..8862
                     /gene="rplW"
                     /locus_tag="OY092_000756"
     CDS             8587..8862
                     /gene="rplW"
                     /locus_tag="OY092_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HCX1075725.1"
                     /translation="MEARDILKRPVITEKSSEAMAEDKYTFDVDTRVNKTQVKMAVEE
                     IFNVKVASVNIMNYKPKKKRMGRYQGYTNKRRKAIVTLKEGSIDLFN"
     gene            8895..9728
                     /gene="rplB"
                     /locus_tag="OY092_000757"
     CDS             8895..9728
                     /gene="rplB"
                     /locus_tag="OY092_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HCX1075726.1"
                     /translation="MAIKKYKPITNGRRNMTSLDFAEITKTTPEKSLLKPLPKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGINAKVDSIQYDPNRSANIALVVYADGEKR
                     YIIAPKGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGA
                     SAQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKK
                     K"
     gene            9795..10073
                     /gene="rpsS"
                     /locus_tag="OY092_000758"
     CDS             9795..10073
                     /gene="rpsS"
                     /locus_tag="OY092_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HCX1075727.1"
                     /translation="MARSIKKGPFVDEHLMKKVEAQEGSEKKQVIKTWSRRSTIFPNF
                     IGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHVADDKKTRR"
     gene            10102..10455
                     /gene="rplV"
                     /locus_tag="OY092_000759"
     CDS             10102..10455
                     /gene="rplV"
                     /locus_tag="OY092_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HCX1075728.1"
                     /translation="MEAKAVARTIRIAPRKVRLVLDLIRGKNVAEAIAILKLTNKASS
                     PVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSH
                     ITIVVSDGKEEAKEA"
     gene            10479..11132
                     /gene="rpsC"
                     /locus_tag="OY092_000760"
     CDS             10479..11132
                     /gene="rpsC"
                     /locus_tag="OY092_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HCX1075729.1"
                     /translation="MGQKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDN
                     ELKEASVSHVEIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINV
                     IEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGAD
                     IARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSGGGK"
     gene            11135..11569
                     /gene="rplP"
                     /locus_tag="OY092_000761"
     CDS             11135..11569
                     /gene="rplP"
                     /locus_tag="OY092_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HCX1075730.1"
                     /translation="MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITS
                     RQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRI
                     LFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGETNES"
     gene            11559..11768
                     /gene="rpmC"
                     /locus_tag="OY092_000762"
     CDS             11559..11768
                     /gene="rpmC"
                     /locus_tag="OY092_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HCX1075731.1"
                     /translation="MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIR
                     TVRKTIARLKTVAREREIEQSKANQ"
     gene            11792..12055
                     /gene="rpsQ"
                     /locus_tag="OY092_000763"
     CDS             11792..12055
                     /gene="rpsQ"
                     /locus_tag="OY092_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HCX1075732.1"
                     /translation="MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSK
                     KYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEIVEESVII"
     gene            12087..12455
                     /gene="rplN"
                     /locus_tag="OY092_000764"
     CDS             12087..12455
                     /gene="rplN"
                     /locus_tag="OY092_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HCX1075733.1"
                     /translation="MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVK
                     NATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPV
                     ARELREGNFMKIVSLAPEVL"
     gene            12491..12808
                     /gene="rplX"
                     /locus_tag="OY092_000765"
     CDS             12491..12808
                     /gene="rplX"
                     /locus_tag="OY092_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HCX1075734.1"
                     /translation="MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKH
                     QKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIK
                     SNN"
     gene            12835..13374
                     /gene="rplE"
                     /locus_tag="OY092_000766"
     CDS             12835..13374
                     /gene="rplE"
                     /locus_tag="OY092_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HCX1075735.1"
                     /translation="MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAV
                     QNSKVLDNAVEELELITGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDK
                     LISVSLPRVRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
                     NTDEEARELLANFGMPFRK"
     gene            13397..13582
                     /locus_tag="OY092_000767"
     CDS             13397..13582
                     /locus_tag="OY092_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HCX1075736.1"
                     /translation="MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICF
                     RELAYKGQIPGVRKASW"
     gene            13614..14012
                     /gene="rpsH"
                     /locus_tag="OY092_000768"
     CDS             13614..14012
                     /gene="rpsH"
                     /locus_tag="OY092_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000178880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HCX1075737.1"
                     /translation="MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEG
                     FIKNVEYVEDDKQGVLRLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLG
                     IALVSTSEGVITDKEARKRNVGGEIIAYVW"
     gene            14037..14573
                     /gene="rplF"
                     /locus_tag="OY092_000769"
     CDS             14037..14573
                     /gene="rplF"
                     /locus_tag="OY092_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HCX1075738.1"
                     /translation="MSRVGKKIIDIPSDVTVTFDGNHVTVKGPKGELSRTLNERMTFK
                     QEENTIEVVRPSDSKEDRTNHGTTRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKD
                     LILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGK
                     GIRYQGEYVRRKEGKTGK"
     gene            14604..14963
                     /gene="rplR"
                     /locus_tag="OY092_000770"
     CDS             14604..14963
                     /gene="rplR"
                     /locus_tag="OY092_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HCX1075739.1"
                     /translation="MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQI
                     IDDNKGVTLAQASSKDSDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYH
                     GRVKALAEAARESGLEF"
     gene            14984..15484
                     /gene="rpsE"
                     /locus_tag="OY092_000771"
     CDS             14984..15484
                     /gene="rpsE"
                     /locus_tag="OY092_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HCX1075740.1"
                     /translation="MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNG
                     RVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTITGRYGSGSVFMKPAAPG
                     TGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATIDGLQNLKNAEDVAKLRGKT
                     VEELYN"
     gene            15501..15680
                     /gene="rpmD"
                     /locus_tag="OY092_000772"
     CDS             15501..15680
                     /gene="rpmD"
                     /locus_tag="OY092_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HCX1075741.1"
                     /translation="MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIR
                     GQINKVKHLVTVEEK"
     gene            15697..16137
                     /gene="rplO"
                     /locus_tag="OY092_000773"
     CDS             15697..16137
                     /gene="rplO"
                     /locus_tag="OY092_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HCX1075742.1"
                     /translation="MKLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGG
                     GVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNKFEDGTEVTPALLVESGVV
                     KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKGGAHEVI"
     gene            16137..17429
                     /gene="secY"
                     /locus_tag="OY092_000774"
     CDS             16137..17429
                     /gene="secY"
                     /locus_tag="OY092_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HCX1075743.1"
                     /translation="MIQTLVNFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAF
                     DNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQ
                     GEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAG
                     TAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVL
                     GLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQATYLPLKVNSAGVIPVIFA
                     MAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEK
                     MADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFMGLPQ
                     SIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR"
     gene            17446..18093
                     /locus_tag="OY092_000775"
     CDS             17446..18093
                     /locus_tag="OY092_000775"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HCX1075744.1"
                     /translation="MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETE
                     LGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSE
                     LDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQR
                     EDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL"
     gene            18286..18504
                     /gene="infA"
                     /locus_tag="OY092_000776"
     CDS             18286..18504
                     /gene="infA"
                     /locus_tag="OY092_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HCX1075745.1"
                     /translation="MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNY
                     IRILPGDKVTVEMSPYDLTRGRITYRYK"
     gene            18536..18649
                     /gene="rpmJ"
                     /locus_tag="OY092_000777"
     CDS             18536..18649
                     /gene="rpmJ"
                     /locus_tag="OY092_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HCX1075746.1"
                     /translation="MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQRQG"
     gene            18672..19037
                     /gene="rpsM"
                     /locus_tag="OY092_000778"
     CDS             18672..19037
                     /gene="rpsM"
                     /locus_tag="OY092_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HCX1075747.1"
                     /translation="MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTR
                     VKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKT
                     KNNARTRKGPVKTVANKKK"
     gene            19061..19450
                     /gene="rpsK"
                     /locus_tag="OY092_000779"
     CDS             19061..19450
                     /gene="rpsK"
                     /locus_tag="OY092_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HCX1075748.1"
                     /translation="MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSW
                     SSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQS
                     AGLEVTAIRDVTPVPHNGCRPPKRRRV"
     gene            19525..20469
                     /locus_tag="OY092_000780"
     CDS             19525..20469
                     /locus_tag="OY092_000780"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HCX1075749.1"
                     /translation="MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVR
                     DEGEVTASDITHDSDVEILNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLP
                     IGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMT
                     EHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQE
                     LADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED"
     gene            20486..20854
                     /gene="rplQ"
                     /locus_tag="OY092_000781"
     CDS             20486..20854
                     /gene="rplQ"
                     /locus_tag="OY092_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002450507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HCX1075750.1"
                     /translation="MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVV
                     EKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTR
                     ILKQGPRRGDGAESVIIELV"
     gene            21392..22201
                     /locus_tag="OY092_000782"
     CDS             21392..22201
                     /locus_tag="OY092_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HCX1075751.1"
                     /translation="MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHN
                     GSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVK
                     YDVAFGLENHAVPHDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALN
                     PSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKG
                     TVYKEGTAIEIFDHAEELTTIGLDLPFPIKINQMLGYQTSFLTYEGLVDQL"
     gene            22198..23058
                     /locus_tag="OY092_000783"
     CDS             22198..23058
                     /locus_tag="OY092_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HCX1075752.1"
                     /translation="MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGS
                     GKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDT
                     VEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL
                     AMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIV
                     MKEGSIVSQTSPKELFKDKEKLADWHIGLPEIVQLQYDFEQKHQTKLKDIALTEEAFV
                     SLYKEWQHEK"
     gene            23048..23854
                     /locus_tag="OY092_000784"
     CDS             23048..23854
                     /locus_tag="OY092_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HCX1075753.1"
                     /translation="MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLT
                     YLWVFALILFFMRLAKIQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITI
                     ETNGILEGLYISLRLIGIVMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMI
                     MSIALRFIPTLMDELDKIILAQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEE
                     LAVAMEVRGYDANVQRTSYRQLKWQLRDTLSLIMIIPFAIILFVLKYSGV"
     gene            23859..24662
                     /gene="truA"
                     /locus_tag="OY092_000785"
     CDS             23859..24662
                     /gene="truA"
                     /locus_tag="OY092_000785"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HCX1075754.1"
                     /translation="MRILVEIAYQGNNFLGFQIQQNGRTVQQQFEKLLQRMHKRHVRI
                     HPSSRTDRGVHAIQQYFHFDTELNIPMSQWQYAMNRTLPDDIYVNNVVTVDDDFHCRY
                     DCVGKRYRYKVYQAQHRDPFQSGLKTFIPETLDLDKMNRAAQQFIGTHDFTGFCSQKT
                     EVESKVRTLYQSEIVKTDDGFDYIVTGSGFLYNMVRVLVAFLIEVGKGRHEVSDVPKL
                     LESKNRKNVPFTAPAEGLYLEKIYLDENELLKDFGNDIKIHRKKSLQND"
     gene            24902..25339
                     /gene="rplM"
                     /locus_tag="OY092_000786"
     CDS             24902..25339
                     /gene="rplM"
                     /locus_tag="OY092_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HCX1075755.1"
                     /translation="MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKAT
                     YTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLI
                     ENSIKGMLPSTRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG"
     gene            25353..25751
                     /gene="rpsI"
                     /locus_tag="OY092_000787"
     CDS             25353..25751
                     /gene="rpsI"
                     /locus_tag="OY092_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HCX1075756.1"
                     /translation="MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFE
                     SLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKR
                     AGLLTRDPRMKERKKPGLKAARRSPQFSKR"
     gene            26340..26519
                     /locus_tag="OY092_000788"
     CDS             26340..26519
                     /locus_tag="OY092_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075757.1"
                     /translation="MTEIVEFLSDGKLASRLEIQETMGLQKSYTSELIAELKKLEIIG
                     SEGRGLGTRYYLIRD"
     gene            27169..27351
                     /locus_tag="OY092_000789"
     CDS             27169..27351
                     /locus_tag="OY092_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075758.1"
                     /translation="MKDSIFWKKAFIPVYFIVAMLVFLLFRFYIKTDNFSMYLMIIFL
                     ICLGTASIIYNYKNNR"
     gene            complement(27333..27613)
                     /locus_tag="OY092_000790"
                     /pseudo
     CDS             complement(27333..27613)
                     /locus_tag="OY092_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500937.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            27846..29510
                     /gene="alsS"
                     /locus_tag="OY092_000791"
     CDS             27846..29510
                     /gene="alsS"
                     /locus_tag="OY092_000791"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase AlsS"
                     /protein_id="HCX1075759.1"
                     /translation="MTDKKYTAADMVIDTLKNNGVEYVFGIPGAKIDYLFNALIDDGP
                     ELIVTRHEQNAAMMAQGIGRLTGKPGVVLVTSGPGVSNLTTGLLTATSEGDPVLALGG
                     QVKRNDLLRLTHQSIDNAALLKYSSKYSEEVQDPESLSEVMTNAIRIATSGKNGASFI
                     SIPQDVISSPAESKAISLCQKPNLGVPSEQDINDVIEAIKNASFPVLLAGMRSSSADE
                     TNAIRKLVERTNLPVVETFQGAGLISRELENHFFGRVGLFRNQVGDELLRKSDLVVTI
                     GYDPIEYEASNWNKELDTQIINIDEVQAEITNYMQPKKELIGNIAKTIEMISDKVDEP
                     FINQQHLDELEQLRAHIDQETGIKATHEEGILHPVEIIESMQKVLTDETTVTVDVGSH
                     YIWMARNFRSYNPRHLLFSNGMQTLGVALPWAISAALVRPNTQVVSVAGDGGFLFSSQ
                     DLETAVRKNLNIIQLIWNDGKYNMVEFQEEMKYKRSSGVDFGPVDFVKYAESFGAKGL
                     RVTNQEELEAAIKEGYETDGPVLIDIPVNYKDNIKLSTNMLPDVFN"
     gene            29547..30251
                     /gene="budA"
                     /locus_tag="OY092_000792"
     CDS             29547..30251
                     /gene="budA"
                     /locus_tag="OY092_000792"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HCX1075760.1"
                     /translation="MASVLYQHGTLGTLMAGLLKGTASINELLQHGDLGIATLTGSNG
                     EVIFLDGKAYHANEHKEFVELKGDELTPYATVTKFVADTSYETKDKSSEAVFAEIKEK
                     MLSENLFSAVKISGLFKKMHVRMMPAQEPPYTRLIDSARRQPEQTETYVKGSVVGFFT
                     PELFHGIGSAGFHVHFANDDRNFGGHVLDFEVEDVKVEIQNIETFEQHFPIHDEDFTN
                     ANIDYKDISDEIREAE"
     gene            complement(30630..31055)
                     /locus_tag="OY092_000793"
     CDS             complement(30630..31055)
                     /locus_tag="OY092_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HCX1075761.1"
                     /translation="MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKEMTMDGY
                     HTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTA
                     TYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK"
     gene            31350..32165
                     /locus_tag="OY092_000794"
     CDS             31350..32165
                     /locus_tag="OY092_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HCX1075762.1"
                     /translation="MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVI
                     TAVLTGSTFQSVMDKMDQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEP
                     FLFEDIEDILRHISAQYNVEFIPQRAFEGNETHYNFYFHSTGNHNNDRRILEALVRYA
                     NDQNYTARFSRSNPLAGDPENAYDIDFTPSNAGKLYATQFLMKKYNIPVKSILGFGDS
                     GNDEAYLSYLEHAYLMSNSRDEALKQKFRLTKYPYYQGITLHVKEFVEGKYDY"
     gene            complement(32398..>32961)
                     /locus_tag="OY092_000795"
     CDS             complement(32398..>32961)
                     /locus_tag="OY092_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCX1075763.1"
                     /translation="LTQNIREKNSIIVLQRFVAMKNITHIISAINIVRKKVKDVKLHI
                     YGTGTQKENYTKLIKKLKLQDNVFIHDYAFDIRALYTKTSLSVLTSDYEGLPMSLLEA
                     MSYGVPVISYPINYGPKSIIQNNINGIITKKKDNINELAKKIIHVLKKETLISQFSEN
                     ARTTIKTNFSYEAVSKKWIELIDEKSQ"
BASE COUNT        11794 a         5101 c         6192 g         9874 t
ORIGIN      
        1 attttgcgaa aatatcattt ctgtcccact ccctatgcag ctatccactt catatgtatg
       61 gcgcatactt gataaatgaa tatcatcaag attttaaaag tatcgctaat tttaaagtct
      121 taaaacgcat gattaatgtc atgatgtgtt attgtgtttt gtttttagag ccacgtattt
      181 cctaggaaat atagaggaac attcaacgta aaattctcga aaattaattt taatcattct
      241 ataagtgaat ggttattttc agaagcgata acatttttac tttacatgag tatttaactt
      301 tctatttcaa attacctaga attatagcag ctatcacgat aataataata cctgcccaaa
      361 tacccgtcat ctgacgacga tcttttcttt ctcctaaaat gaaaataccg cctaaggttg
      421 aaacgataac aagtaactgt gataatgaga aacttgtagc tacaccaact tttggttgag
      481 aatagaacat gaacaagtta ccaattcccc aaatcacacc tggcaataga ttaagtgctg
      541 ttgatttaag tgatgtttta tgattcatgg ataggataaa gccaccaatt gccataccga
      601 cagattggaa gaacaatgca tcagttccac caacaccaaa gatgtcacca agtacaacga
      661 aacctacatg tccaactgta gatacaatta aaatacccat tgctttttta aattcaggat
      721 tatctgattg acgttcattt ttagctttaa gtgaagtaag tgctacacca gtaactaata
      781 atatcatggc gattaaacca aagataattt gagtcattga agaccattca cctaaaaaga
      841 taacgctgaa taatgttgta ccaactaatt gcatacctgt agaaactggc atagtatttg
      901 atacaccgat taaactaata gatttaagct gattcgcttg tccaaacgcc cataatgcac
      961 cagaaataag accgacaata attacagtag gattattgaa ttttgcgaaa ccagtaataa
     1021 gtaaacctaa tccaacaatg agtgcgccta gcgtcgtacc acgaatttgg ttgtaaggtc
     1081 caccgccgac gaacacatta ataagaacga cacttcccca gaataaagca ggtaaaagtg
     1141 cgattaagaa atcaagaaat tgcaagacta ctcactctcc tatactattt atgcaagtgc
     1201 tccccttaat tgacacttgc atgttattgt aaagcattct gccctaatag taaaaaacaa
     1261 ctacttataa ttttcaatat ttacaaaaag tagaaaaacc cacaatacat gctaatgatg
     1321 tactgttggg tatttgcttg gtattttatt cagggattgt ttgatctttt acgttacgtg
     1381 attcgaattt gaatttaatg tactcatagt tgatatggaa gcctagacca ttaaatcgtt
     1441 cgatgagttt attattttta ttacgaattt taaaataaac ttttctaata tcaaagttat
     1501 caaaagcata ttgcaatgca tacgcaagca actcgaaagc gatacctttc aaacggtaat
     1561 ctacatgtga actgaagtat ttaatctcgg cgattgattg ttgtgaatca atttcaaggt
     1621 ataaataacc tttaagtaaa ccttcgctaa caaataaaaa caaatgatga tggtcgtcta
     1681 aactatcaat gatatcttgt ggtgactgtg cctgatattt aaatgtagtt gtgtgtaatt
     1741 tgctgaaagc acgataaaac cctttgtgat aaggaatgat atttggttgg tgcatatctt
     1801 cttctaatct tgtacgggct tctatgtaat agtcagtgaa gttataactt gcttgaataa
     1861 ctttcattaa tggtttgtat tgttgaatgc cttcttcaaa agaaaagtta aagacggcat
     1921 cgtcaggttg gttcgaagtc attgctttaa acagcttttc aaacgtatcg acagataata
     1981 cataattgtc agctacgaaa gggcctatga ctttgaattt atttttatcg tatgcaaaag
     2041 acaatatgat tgctttgatt gaatcgtttt ctttaatcga aaatacacca ggtgattcaa
     2101 tcgcatcggt tattaataca tctatttcat tgtactgttg aggaagttta tataagtatg
     2161 atgctgattc ataattcgaa tgttcaatga acgattttat ttgtgtaata tcatataact
     2221 gaactatgct catgtcatta cctccgtact ttttgttact tttattatat agtatttcaa
     2281 ctgaaatgaa agttaatagt gatattaaca tgttacaata catttaacac atcatttgca
     2341 atcattgaat ttaaatcaaa gattagtgga atagatgaag cacgttcgaa ataaaagaac
     2401 gtatgagaaa ggataattta tgaaatcttt aatattagct gaaaaaccat cagtcgcaag
     2461 agatattgct gatgctttac aaataaatca gaagcgtaat ggttactttg aaaataacca
     2521 atatattgtc acgtgggcgt taggtcatct agtgacaaat gcgacacctg aacaatacga
     2581 taaaaattta aaggaatggc gattagaaga ccttccaatt atacctaaat atatgaaaac
     2641 tgttgttatt ggtaaaacaa gcaaacaatt taaaacagta aaagcgttaa ttttagataa
     2701 taaagtgaaa gatattatta ttgcaacaga tgctggacga gaaggtgaac tagttgcaag
     2761 attgattttg gataaagttg gtaacaaaaa gccaatccgt cgattatgga ttagctcagt
     2821 tactaaaaaa gctattcaac aaggttttaa aaatttaaaa gacggtcgtc aatataacga
     2881 tttgtattat gcagcgttag cgagaagtga ggcggattgg attgttggga ttaatgcaac
     2941 gcgtgcacta acaacaaagt atgatgcaca gctatccctg ggacgtgttc agacaccaac
     3001 gattcaatta gtaaatacac gacaacaaga gattaatcag ttcaaaccac aacaatacta
     3061 tacattatca ttaacggtaa aagggtttga ttttcagcta gaatcaaatc agcgatatac
     3121 caataaagaa actttagaac agatggttaa taatttgaaa aatgtcgatg gtaagattaa
     3181 atctgttgct actaaacata agaagtcgta tccgcaatca ctgtacaatt taacagattt
     3241 acaacaagat atgtatagac gttataaaat tggacctaaa gaaacattga atacacttca
     3301 aagtttatat gagagacata aagtcgtaac ctatccaaga acagattcaa actatttaac
     3361 aactgatatg gtagatacta tgaaagaacg tattcaggcg acgatggcaa caacatataa
     3421 agaccaagca cgcccattaa tgtctaaaac attttcatca aaaatgtcga tatttaataa
     3481 tcaaaaagta tctgatcacc atgcaattat tcctacagaa gtgagacctg tcatgtcaga
     3541 cttaagtaat agagaactaa agttatacga tatgattgtc gagcgttttt tagaagcttt
     3601 aatgcctccg cacgagtatg acgcgataac tgtaacttta gaggttgcag ggcacacatt
     3661 tgttttgaaa gagaatgtaa caactgtttt aggttttaaa tctattagac aaggtgaatc
     3721 tattacagag atgcaacagc ctttttcaga aggcgatgaa gtgaagattt caaaaacaaa
     3781 cattagagaa catgaaacaa cacctccaga atattttaat gaaggttcgt tattaaaagc
     3841 gatggagaac cctcagaact ttattcaatt gaaggataaa aaatatgcgc aaactttaaa
     3901 gcaaacaggt ggtatcggca cagttgcaac aagggccgac attatcgata aattatttaa
     3961 tatgaatgct attgaatcaa gagacggtaa aattaaagta acgtcaaaag gtaaacaaat
     4021 attagaatta gcaccagaag aattaacgtc gccactttta actgcacaat gggaagaaaa
     4081 actactttta attgaacgtg gtaaatatca ggcgaaaaca ttcattaatg aaatgaaaga
     4141 ttttacgaaa gatgttgtaa atgggattaa aaatagtgat cgtaaatata aacacgataa
     4201 tttaacaacc actgaatgcc caacgtgtgg taaattcatg attaaagtta aaactaaaaa
     4261 tggtcagatg cttgtgtgcc aagatccatc ttgtaagacg aaaaagaatg tacagcgcaa
     4321 aacaaatgca agatgtccaa actgtaaaaa gaaattaacg ttgtttggta aagggaaaga
     4381 agcggtatat cgttgtgttt gtggacattc tgaaacgcaa gcacatatgg atcagcgtat
     4441 gaagtctaaa tcctctggta aagtatctcg taaagaaatg aaaaagtata tgaataaaaa
     4501 tgaaggttta gacaataatc cgtttaaaga tgcattaaag aacttgaatt tatagataaa
     4561 atcgaacaaa gttgaatcag aaaaacgaaa agttcgcttt tggtattgtt ttttattaag
     4621 aatgatatta aactattaag gtattttaaa aaaaggagca tccattcgtg aaaaactatt
     4681 tccagttcga taaatatgga acaaacttta aaagagaaat cttaggcggt atcacaactt
     4741 tcttatctat ggcctatatt ttagcagtta acccgcaagt tttaagttta gcaggtgtta
     4801 aaggcgtatc agaagatatg aaaatggacc aaggtgccat ttttgtagcg actgcattag
     4861 cagcatttgt aggctcgcta ttcatgggac taatagctaa atatccaatt gcgttagcac
     4921 caggtatggg attaaatgca ttctttgcat ttactgttgt gttaaccatg ggtattcctt
     4981 ggcaagttgg tttaacaggc gttttattct caggtatatt ctttgcgata ttaaccgtca
     5041 cagggtttag ggaagttatt attaatgcaa ttccttatca aatgaagatg gctgtttcag
     5101 caggtatagg attattcatt acatttgtag gtttacaaag ttcgggtatt atagttaaaa
     5161 atgaatctac attagtaaca ttgggacatt taactgatcc accagtactt ttagcgatat
     5221 tcggtatcgt tattacagtt attttatatg caattaaatt gccgggttct atctttatcg
     5281 gtatgatcat cacagcaatc gttggtatgt tcactggatt gattcaaatg ccatctggta
     5341 ttgtaggtaa gattccaagt attgaaccaa cgttcggtgc tgcatttgaa gcgtttaaag
     5401 acccaagtca attattaacg atacagttct taattgttat tttaacgttc ttatttattg
     5461 atttctttga tacagctggt acattagtag ccgttgctac tcaagcaggt attatgaaag
     5521 ataataaatt accaagagct ggtagagcat tgttctcaga ttctttagct acgattgtag
     5581 gatcagtttt tggaacaact acaacaactt cttatatcga atcaacttca ggtgttgctg
     5641 taggtgctag aacaggattt gctagtatcg taacaggttg ttgtttccta ttagcgctgt
     5701 tctttagtcc gttaatcgct gttgtaacaa gtgcagttac gacaccagct ttagtggtgg
     5761 taggtgtatt aatggctgca aactttgctg agataaactg gaaaagtttt gaagttgcag
     5821 tgccagcatt cattacaatc attatgatgc ctttatcata ctcaattgca actggtattg
     5881 cgtgtggatt tattttctat ccaattacaa tgcttatctc taaaaaacat aaagaagtac
     5941 atccgataat gtatgtatta atggtactat tcattctgta cttcatattt gttcatggtt
     6001 aaatccatac acaaaaaacg actgccaatg attggtagtc gttttttctt tgaagtaagg
     6061 ataaaataag aagcgaaata acataaagca atattatgaa tgtctttaaa tatccgatat
     6121 aaatatactt cttttaaaat tgttggacgt gtttcttcta tattatatac ctaattaaaa
     6181 aggttttaag aattattctc tatgtccatc tttgtattgt gtgtaaatga cacgagcatt
     6241 tttattaggt atataggttg gcgctgataa tacaactagg acaaatagaa tcattaggaa
     6301 aaataaaatc caatgaatca aaattcctaa gaaggggata atagctaaaa aactacctac
     6361 tataccaaat attggaataa tcgctatagg tctaatcgca ttttgtctat tcactaataa
     6421 tataatagta agaattagat aaagtaatgc attaaagagt aaaggctgcc atccaaaact
     6481 taaaataaac gttgcaccta aaaaaggaat gccatagaaa aactcacaaa gtattaaaaa
     6541 gatacctata agtgctaaag ataattttgg tccatttttc atattcattc accaccgttc
     6601 ttatgactaa ttatatagaa taattttcaa tgataataat aaaatgattc aaggtacgaa
     6661 tttacaataa agaaggaaat aaaaaatatc tcgaaaatag ttgaactgac taagtatata
     6721 aagtaaaata taaaagtatg tgttagacag atagaaaaat tatgtgaaaa gccttgattt
     6781 atcgatgttt ttcgtgtaat ataactaacg ttggacttta agaaaagcga tgaagcgaaa
     6841 ggttactgac acacccggcc gctttgccat ggcgctgtgt aagatagttt tcgtggagaa
     6901 gtctatcact aaatgtagac gaataaggag ggaaaattat ggcaaaacaa aaaatcagaa
     6961 tcagattaaa agcttatgat caccgcgtga ttgatcaatc agcagagaag attgtagaaa
     7021 cagcgaaacg ttctggtgca gatgtttctg gaccaattcc gttaccaact gagaaatcag
     7081 tttacacaat catccgtgcc gtgcataagt ataaagattc acgtgaacaa ttcgaacaac
     7141 gtacacacaa acgtttaatc gatattgtaa acccaacacc aaaaacagtt gacgctttaa
     7201 tgggcttaaa cttaccatct ggtgtagaca tcgaaatcaa attataatag acaattttag
     7261 gaggtggact ttcgatgacc aaaggaatct taggaagaaa aattgggatg acacaagtat
     7321 tcggagaaaa cggtgaatta atccctgtaa cagtagtaga agctaaagaa aatgttgtat
     7381 tacaaaagaa aactgtagaa gttgatggat acaacgcaat ccaagttgga tttgaagaca
     7441 aaaaagcata caaaaaagat gcaaaatcta ataaatatgc taataaacca gctgaaggtc
     7501 acgctaaaaa agctgacgca gcacctaagc gcttcattcg tgaattccgc aatgtagacg
     7561 tggatgctta cgaagtaggt caagaagtct cagtagatac ttttgtagct ggcgacgtta
     7621 ttgacgtaac aggcgtatca aaaggtaaag gtttccaagg tgcaattaaa cgccacggac
     7681 aatctcgtgg acctatgtca catggttctc atttccacag agcaccaggt tctgtaggta
     7741 tggcttcaga tgcttctaga gtatttaaag gccaaaaaat gccaggacgt atgggtggaa
     7801 acacagtaac tgttcaaaac ttagaagtag ttcaagttga cacagaaaac aaagttatct
     7861 tagtaaaagg taacgtacct ggacctaaaa aaggtttagt agaaatcaga acttcaatta
     7921 aaaaaggtaa taaataataa gaagtgaaag gaggaaatgc ataatggcta attatgatgt
     7981 tttaaaatta gacggaacta aatcaggttc aatcgaatta agcgatgcag tattcggtat
     8041 tgagccaaat aatagcgttt tattcgaagc tattaattta caacgtgctt cattacgtca
     8101 aggtacgcat gctgttaaga atcgttcagc agtaagcggt ggcggacgta aaccatggaa
     8161 gcaaaaagga acaggtcgtg ctcgtcaagg tacaatccgt gctccacaat ggcgtggcgg
     8221 tggtatcgta ttcggaccaa ctccaagaag ttatgcatac aaaatgccta agaaaatgcg
     8281 tcgtttagct ttacgctcag cattatcttt caaagctcaa gagaatggct taactgtagt
     8341 tgacgcattt aacttcgaag ctccaaaaac taaagaattc aaaaatgtat tatctacatt
     8401 agaacaacct aaaaaagtat tagtagttac tgaaaacgaa gatgtaaatg ttgaattatc
     8461 agcacgcaac atccctggcg ttcaagtgac aactgctcaa ggtttaaatg ttttagatat
     8521 cactaatgct gacagcttag taattactga agctgctgct aaaaaagttg aggaggtgct
     8581 cggataatgg aagcaagaga tattcttaag cgccccgtaa tcactgagaa atcttctgaa
     8641 gcaatggctg aagacaaata cactttcgac gttgatactc gtgttaacaa aacacaagta
     8701 aaaatggcag ttgaagaaat cttcaacgta aaagttgcaa gtgttaatat catgaattac
     8761 aaacctaaga aaaaacgtat gggccgttac caaggctata caaacaaaag aagaaaagcg
     8821 attgtaactc ttaaagaagg atcaatcgac ttatttaact aataaaccaa ttaccattaa
     8881 ggaggtaagc gacaatggct attaaaaagt ataagccaat aacaaatggt cgtcgtaata
     8941 tgacttcgtt agatttcgca gaaatcacga aaactacacc tgaaaagtca ttattaaaac
     9001 cgctaccgaa aaaagcggga cgtaacaacc aaggtaaatt gactgtaaga caccatggtg
     9061 gtggacacaa acgtcaatac cgtgttatcg atttcaaacg taacaaagat ggtatcaatg
     9121 caaaagttga ttctattcaa tatgatccaa accgctcagc aaacatcgct ttagttgtat
     9181 atgcagacgg tgaaaaacga tatatcattg ctcctaaagg attagaagta ggtcaaatcg
     9241 ttgaaagtgg tgctgaagct gacatcaaag ttggtaacgc attaccatta caaaacattc
     9301 cagttggtac agtagtacac aacatcgagc ttaaacctgg taaaggtgga caaatcgctc
     9361 gttcagctgg tgcaagtgct caagtacttg gtaaagaagg taagtacgta ttaatcagat
     9421 taagatctgg tgaagttcgt atgatcttat ctacttgccg tgctacaatc ggtcaagttg
     9481 gtaacctaca acacgaatta gttaacgttg gtaaagccgg acgttcaaga tggaaaggta
     9541 ttcgtccaac agttcgtggt tctgtaatga accctaacga tcacccacac ggtggtggtg
     9601 aaggtcgtgc tcctatcggt agaccatctc caatgtcacc atggggtaaa cctacgcttg
     9661 gtaagaaaac tcgtcgtggt aaaaaatcat cagacaaact tatcgttcgt ggacgtaaga
     9721 aaaaataata taatcaactt atttgggtgt gcggcttaaa gctgcacgca cataataaga
     9781 agggaggcgc ccaaatggct cgtagtatta aaaaaggacc tttcgtcgat gagcatttaa
     9841 tgaaaaaagt tgaagctcaa gaaggaagcg aaaagaaaca agtaatcaaa acatggtcac
     9901 gtcgttctac aattttccct aatttcatcg gacatacatt tgcagtatac gacggacgta
     9961 aacacgtacc tgtatatgta actgaagata tggtaggtca taaattaggt gagtttgctc
    10021 ctactcgtac attcaaagga cacgttgcag acgacaagaa aacaagaaga taatatctat
    10081 taagtagagg aggacatcct aatggaagca aaagcggttg ctagaacaat aagaatcgca
    10141 cctcgtaaag taagactagt tcttgactta atcagaggta aaaatgttgc tgaagctatt
    10201 gcaattttaa aattaacaaa caaagcttca tcaccagtaa ttgaaaaagt attaatgtcc
    10261 gctttagcta atgctgaaca taactatgac atgaacacag atgaattagt agttaaagaa
    10321 gcatatgcta acgaaggacc aacattaaaa cgtttccgtc cacgtgcgca aggtcgtgca
    10381 agtgcgatta acaaacgtac aagccacatt acaatcgtcg taagtgacgg taaagaagaa
    10441 gctaaagaag cttaattaac ttttaaggag ggaatactgt gggtcaaaaa attaatccaa
    10501 tcggacttcg tgttggtatt atccgtgatt gggaagctaa atggtatgct gaaaaagact
    10561 tcgcttcact tttacacgaa gatttaaaaa tccgtaaatt tattgataat gaattaaaag
    10621 aagcatcagt ttctcacgta gagattgaac gtgctgcaaa ccgtatcaac attgcaattc
    10681 atactggtaa acctggtatg gtaattggta aaggcggttc agaaatcgaa aaattacgca
    10741 acaaattaaa tgcgttaact gataaaaaag tacacatcaa cgtaattgaa atcaaaaaag
    10801 ttgatcttga cgctcgttta gtagctgaaa acatcgcacg tcaattagaa aaccgtgctt
    10861 cattccgtcg tgtacaaaaa caagcaatca ctagagctat gaaacttggt gctaaaggta
    10921 tcaaaactca agtatctggt cgtttaggcg gagctgacat cgctcgtgct gaacaatatt
    10981 cagaaggaac tgttccactt catacgttac gtgctgacat cgattatgca cacgctgaag
    11041 ctgacactac ttacggtaaa ttaggcgtta aagtatggat ctatcgtgga gaagttcttc
    11101 ctactaagaa cactagtgga ggaggaaaat aataatgtta ctaccaaaac gtgtaaaata
    11161 tcgtcgtcaa catcgtccta aaacaactgg tcgttctaaa ggcggtaact acgtaacatt
    11221 tggtgagttt ggtttacaag ctacaacaac gtcttggatc acatctcgtc aaatcgaatc
    11281 tgctcgtata gcaatgacac gttacatgaa acgtggcggg aaagtttgga ttaaaatctt
    11341 cccacataca ccatatacta aaaaaccttt agaagtacgt atgggtgctg gtaaaggtgc
    11401 ggttgaaggc tggatcgcag ttgttaaacc aggtagaatt ttattcgaag ttgctggcgt
    11461 ttctgaagaa gttgcgcgtg aagcactacg tttagcaagt cacaaacttc cagtaaaaac
    11521 taagtttgta aaacgtgagg aattgggtgg tgaaacaaat gaaagctaag gaaattagag
    11581 acttaaccac ttcagaaatc gaagaacaaa tcaaatcttc aaaagaagag ctttttaacc
    11641 tacgctttca gttagctaca ggtcaattag aagaaactgc acgtattcgt acagtaagaa
    11701 aaacgattgc acgtctaaaa actgttgctc gtgaaagaga aattgaacaa agtaaggcta
    11761 atcaataatt aagtaagagg aggttacaaa agtgagcgaa agaaacgatc gtaaagttta
    11821 tgtaggtaaa gttgtttcag acaaaatgga caagactatt acagtacttg ttgaaactta
    11881 caaaacacac aaattatacg gtaaacgagt aaaatactct aaaaaataca aaactcatga
    11941 tgaaaacaat tcagctaaat taggagacat tgttaaaatt caagaaactc gtcctttatc
    12001 agcaacaaaa cgttttcgtt tagtagagat tgttgaagag tcagtaatta tttaatacaa
    12061 gtttagagat aagggaggtt taactaatga tccaacaaga aacacgcttg aaagtagcag
    12121 acaactctgg tgctcgtgaa gttcttacaa tcaaagtatt aggtggatct ggtcgtaaaa
    12181 cagcaaacat cggcgatgtt atcgtatgta ctgttaaaaa tgcaacacca ggtggcgttg
    12241 ttaaaaaagg tgacgttgtc aaagctgtaa tcgtacgtac taagtcaggt gttcgtcgta
    12301 atgacggttc atacatcaaa tttgatgaaa atgcatgtgt tatcatccgt gatgacaaag
    12361 gcccacgtgg tactcgtatc ttcggacctg ttgctcgtga attacgtgaa ggtaacttca
    12421 tgaaaatcgt atcattagca ccagaagtac tttaattaat aacaaccaat acaaataagg
    12481 aggtgcccac atgcatatca aaaaaggtga caacgttaaa gttatcgcag gtaaagacaa
    12541 aggtaaagaa ggtaaagtaa ttgctactct acctaaaaaa gaccgtgtcg ttgtggaagg
    12601 tgttaacatt atgaaaaaac accaaaaacc aactcaatta aatcctgaag gtggaatctt
    12661 agaaacagag gcagcaatcc atgtttctaa tgtacaatta ttggacccta aaacaaacga
    12721 accaactcgt gtaggttaca aatttgttga tggtaaaaaa gttcgtatcg ctaaaaaatc
    12781 tggcgaagaa attaaatcta ataattaata acaagttgaa aggaggatcc cactttgaac
    12841 cgtttaaaag aaaagtttaa cactgaagtt actgaaaact taatgaaaaa attcaattat
    12901 agttcagtaa tggaagtacc aaaaatagat aaaatcgttg tgaacatggg tgtaggtgac
    12961 gcagtacaaa attctaaagt attagacaat gctgttgaag aattagaatt gatcactggt
    13021 caaaaaccat tagtaactaa agctaaaaaa tcaatcgcga ctttccgttt acgtgaaggt
    13081 atgccaatcg gtgcgaaagt aacacttcgc ggtgaaagaa tgtatgaatt cttagacaaa
    13141 ttaatttcag tatcattacc acgtgtacgt gacttccaag gtgtttctaa aaaagcattt
    13201 gacggacgcg gtaactacac tttaggtgtt aaagaacaat taattttccc agaaatcgac
    13261 tatgataaag taagtaaagt tagaggaatg gatattgtta tcgtaacgac tgctaacact
    13321 gatgaagaag ctcgtgaatt gttagctaac ttcggtatgc cattccgtaa ataattattt
    13381 aaaggaggct aattaagtgg ctaaaacttc aatggttgct aagcaacaaa aaaaacaaaa
    13441 atatgcagtt cgtgaataca ctcgttgtga acgttgtggc cgtccacatt ctgtatatcg
    13501 taaatttaaa ttatgccgta tttgtttccg tgaattagct tacaaaggcc aaatccctgg
    13561 cgttcgtaaa gctagctggt aataaaaaag agtctgaaag gaggcaacaa tcaatgacaa
    13621 tgacagatcc aatcgcagat atgcttactc gtgtaagaaa cgcaaacatg gtgcgtcacg
    13681 agaagttaga attacctgca tcaaatatta aaaaagaaat tgctgaaatc ttaaagagtg
    13741 aaggtttcat taaaaatgtt gaatacgtag aagatgataa acaaggtgta cttcgtttat
    13801 tcttaaaata tggtcaaaac gatgagcgtg ttatcacagg attaaaacgt atttcaaaac
    13861 caggtttacg tgtttatgca aaagctagcg aaatgcctaa agtattaaat ggtttaggta
    13921 ttgcattagt atcaacttct gaaggtgtaa tcactgacaa agaagcaaga aaacgtaatg
    13981 ttggtggaga aattatcgca tacgtttggt aataaaaaat aaggaggtgc cataacatga
    14041 gtcgtgttgg taagaaaatt attgacatcc ctagtgacgt aacagtaact tttgatggaa
    14101 atcatgtaac tgttaaaggt cctaaaggtg aattatcaag aactttaaat gaaagaatga
    14161 cattcaaaca agaagaaaac acaattgaag ttgtaagacc atctgattct aaagaagata
    14221 gaacaaacca tggtacaact cgtgctttat taaacaatat ggtacaaggt gtttctcaag
    14281 gatacgtaaa agtacttgaa cttgttggtg taggttaccg tgctcaaatg caaggtaaag
    14341 acttaatcct taacgttggt tattctcacc cagtagaaat taaagctgaa gaaaacatta
    14401 ctttctcagt tgagaaaaac acagtcgtta aagttgaagg tatttcaaaa gaacaagttg
    14461 gagcattagc atctaacatc cgttcagtaa gacctccaga accttacaaa ggtaaaggta
    14521 ttcgttacca aggtgaatac gttcgccgta aagaaggtaa aactggtaaa taatagataa
    14581 actctaaaga aaggagtatt gaaatgatca gtaaaattga taaaaataaa gtgcgtttaa
    14641 aaagacatgc tcgtgttcgt actaacttat caggtacagc tgaaaagcca cgtttaaacg
    14701 tatatcgttc aaacaagcat atctacgctc aaattattga tgataataaa ggcgtaacat
    14761 tagctcaagc ttcttcaaaa gacagcgaca ttgctactac agcaactaaa gttgaattag
    14821 caactaaagt cggtgaagca attgctaaaa aagctgctga caaaggcatt aaagaaatcg
    14881 tatttgaccg tggaggatat ttatatcacg gacgtgttaa agcattagct gaagcagcaa
    14941 gagaaagcgg attagaattt taatttaaag gagggacaaa tacatggctc gtagagaaga
    15001 agagacgaaa gaatttgaag aacgcgttgt tacaatcaac cgtgtagcaa aagttgtaaa
    15061 aggtggtcgt cgtttccgtt tcactgcatt agttgtagtt ggagacaaaa atggtcgtgt
    15121 aggtttcggt actggtaaag ctcaagaggt accagaagca atcaaaaaag ctgttgaagc
    15181 agctaaaaaa gatttagtag ttgttccacg tgttgaaggt acaactccac acacaattac
    15241 tggccgttac ggttcaggaa gcgtatttat gaaaccggct gcacctggta caggagttat
    15301 cgctggtggt cctgttcgtg ccgtacttga attagcaggt attactgata tcttaagtaa
    15361 atcattagga tcaaacacac caatcaacat ggttcgtgct acaatcgatg gtttacaaaa
    15421 ccttaaaaat gctgaagatg ttgcgaaatt acgtggcaaa acagtagaag aattatacaa
    15481 ttaaggaggg aaaactagtt atggctaaat tacaaattac cctcactcgt agtgttattg
    15541 gtcgtcctga aacacaacgt aaaactgttg aagctttagg tcttaaaaag actaacagtt
    15601 cagtagttgt tgaagataac cctgctattc gtgggcaaat caacaaagtt aagcacttag
    15661 taacagtaga agaaaaataa tcaaggaggt gccgaaatga aattacatga gttaaaaccg
    15721 gcagaaggtt cacgtaaaga acgcaatcgt gttggacgtg gtgttgcgac aggtaacggt
    15781 aaaacaagtg gtcgcggaca caaaggtcaa aaagctcgtt caggcggtgg tgtaagacca
    15841 ggatttgaag gtggtcaatt accattattc cgtcgtttac caaaacgtgg ttttactaac
    15901 ataaatcgta aagaatatgc tattgttaac ttagaccaac ttaataaatt tgaagatggt
    15961 actgaagtaa ctccagcttt attagtagaa tctggtgttg ttaagaatga aaaatctggt
    16021 atcaaaatac taggtaatgg ttcacttgat aagaaattga cagtgaaagc tcataaattc
    16081 tcagcttcag cagcagaagc tattgatgct aaaggtggag cacacgaggt gatctaatga
    16141 ttcaaaccct tgtgaacttc tttagaacaa aagaggttcg taacaagatt ttcttcacac
    16201 tagcaatgtt agtaattttt aaaataggga cttatatacc agctccagga gtaaatcctg
    16261 cagcttttga taatccccaa ggttctcaag gtgccactga gttattaaat acttttggtg
    16321 gcggagcctt gaaacgattt tctatttttg caatgggtat tgtaccctac atcactgcat
    16381 caatcgtaat gcaattatta caaatggata ttgtccctaa attctcagaa tgggcaaaac
    16441 aaggtgaagt aggtagaaga aagttaaata acgttactcg ttatttagca atttctttag
    16501 catttatcca atctataggt atggcattcc aatttaataa ttatctcaaa ggtgcgctga
    16561 ttatcaatca gtcaattatg agttatttat taatagcact agttttgaca gcaggaactg
    16621 ctttcttaat atggcttggt gatcaaatca ctcagttcgg tgttggtaat ggtatttcta
    16681 ttatcatatt tgcgggtatt ttatcaacgt tgccagccag tctaattcaa tttggacaaa
    16741 ctgcgttcgt tgggcaagaa gatacatcat tagcatggtt gaaagtatta ggacttttag
    16801 tgtcactgat actattaact gtaggtgcta tttatgtact tgaagccgtt cgtaaaattc
    16861 cgattcaata tgctaagaaa caaactgctc aaagattagg ttcacaggca acttatctac
    16921 ctttaaaagt gaactcagcc ggtgttattc ctgtaatctt tgcaatggcg ttcttcttac
    16981 tgcctagaac attaacgttg ttctatccag ataaagaatg ggcacaaaac attgcgaatg
    17041 ctgcaaatcc ttcaagtaat gttggtatgg ttgtatatat tgtactaatt atactattca
    17101 catacttcta tgcatttgta caagttaatc cggaaaaaat ggctgataac cttaagaaac
    17161 aaggtagcta tgttccaggc attagacctg gtgaacaaac caaaaaatat attactaaag
    17221 ttttatatcg tttaactttt gtaggttcta tcttcttagc cgttatttca attctaccga
    17281 tattagcaac taagtttatg ggattaccac aatcaattca gattggtggt acaagtttac
    17341 ttatcgttat tggtgtagcg attgaaacaa tgaaatcttt agaagctcaa gtatctcaaa
    17401 aagaatataa aggctttggt ggtagataat tttaggaggg cacttatgaa tatcattttg
    17461 atgggtttac ctggcgcagg taaaggaact caagcaagtg aaattgtcaa gaaattccca
    17521 ataccccaca tttcaactgg tgacatgttc agaaaagcta taaaagaaga aactgaatta
    17581 ggtaaagaag ctaagtctta tatggaccgt ggcgaattag ttcctgatga agtgactgta
    17641 ggtatcgtta aggaaagaat ttctgaagac gatgcaaaaa aaggcttttt attagatggc
    17701 ttcccaagaa caatcgagca agctgaggca ttaaataata ttatgtctga gcttgacaga
    17761 aacattgatg ctgtcatcaa tatcgaagtt ccggaagaag aattaatgaa ccgtcttaca
    17821 ggtcgtcgaa tctgtgagtc atgtggtaca acgtatcatc ttgtatttaa tcctccgaag
    17881 gtcgaaggta tttgtgatat cgatggtggt aaattgtatc aacgagaaga tgataatcct
    17941 gaaacggtag ctaatcgttt gagtgttaat attaaacaat ctaagcctat tttagatttc
    18001 tatgatcaaa aaggtgtatt gaaaaatatt gatggttcaa aagatattag cgacgttacc
    18061 aaagatgtca ttgatatttt agatcatttg taatagatca acttttagcg gtctatttta
    18121 agtgaggcat gatttaatca tattagatag atgagagtgg caattaacga taattaattc
    18181 ccgtaatttt tgtttaactt ataaaattaa tcactgatag attcgtaaca ataaagttgt
    18241 ctattgacga ttaccttact attgcaaaaa gggggaagtt aatcaatggc taaacaagat
    18301 gtaattgaat tagaaggtac tgtattagat actttaccga acgcaatgtt taaagtagaa
    18361 ttagaaaatg gtcatgagat tttagctcac gtaagtggta aaatcagaat gaattacatt
    18421 cgtattctac ctggcgacaa agtaactgtt gagatgtctc cgtacgattt aacacgcgga
    18481 agaattactt atcgttataa ataatcgtca ctccataata tagggaggta taaaaatgaa
    18541 agtaagacca tcagtaaaac ctatttgcga aaaatgtaaa gtcattaaac gtaaaggtaa
    18601 agtaatggta atttgtgaaa atccaaaaca caaacaaaga caaggttaat aaaagagagg
    18661 tgtaaattaa tatggcacgt attgcaggag tagatattcc acgtgaaaaa cgcgtagtta
    18721 tctcattaac ttatatatac ggtatcggta cgtcaactgc tcaaaaaatt cttgaagaag
    18781 ctaacgtatc agctgatact cgtgtgaaag atttaactga tgacgaatta ggtcgcatcc
    18841 gtgaagttgt agacggttat aaagtcgaag gtgacttacg tcgtgaaact aacttaaata
    18901 tcaaacgttt aatggaaatt tcatcatacc gtggtatccg tcaccgtcgt ggtttaccag
    18961 ttcgtggtca aaaaacgaaa aacaacgcgc gtactcgtaa aggaccagtt aaaacggtag
    19021 ctaacaagaa aaaataatag gtaaaggagg caaattttaa atggcacgta aacaagtatc
    19081 tcgtaaacgt agagtgaaaa agaatattga aaatggtgta gcacacatcc gttcaacatt
    19141 caacaacact attgtaacta tcactgatga gttcggtaat gctttatcat ggtcatcagc
    19201 tggtgcatta ggattcaaag gatctaaaaa atcaacacca tttgcagcac aaatggcttc
    19261 tgaaactgca tctaaatcag ctatggagca tggtttaaaa acagttgaag taacagttaa
    19321 aggacctggt ccaggtcgcg aatcagctat tcgtgcatta caatctgcag gtttagaagt
    19381 aactgcgatc agagacgtta ctccagtacc tcataacggt tgtcgtccac caaaacgtcg
    19441 tcgtgtataa tttatgatgg tattgttaca ggtcactgag caaacatttt aaattaagtc
    19501 gacgtatata aggaggatat ttaaatgata gaaatcgaaa aacctagaat tgagacaatt
    19561 gaaattagtg aagatgctaa attcggtaag ttcgttgttg aaccactaga acgtggctac
    19621 ggtactacac taggaaactc cttacgtcgt atcctactat cttcattacc aggtgcagcc
    19681 gttaagtata ttgaaattga gggagtttta catgaattct cagcagtaga caatgtagtt
    19741 gaagatgttt ctacaattat tatgaacatt aaacaattag cattgaaaat ttactctgaa
    19801 gaagataaaa ctttagaaat tgatgtacgt gatgaaggcg aagtaacagc aagcgacatt
    19861 acacatgaca gtgatgttga aattttaaac ccagagctta aaattgcaac agtatctaaa
    19921 ggtggtcact taaaaattcg tctagttgct aacaagggta gaggttacgc attagcagaa
    19981 caaaataata ctagtgattt accaattggt gtaatccctg ttgattcatt gtattcacct
    20041 gttgaacgtg tgaactatac tgttgaaaat acacgtgtag gtcaaagcag tgattttgat
    20101 aaattaacat tggatgtttg gactaatggt tcaatcacac cacaagaatc agtttcatta
    20161 gcagcaaaaa taatgactga acacttgaat atcttcgttg gtcttactga tgaagcgcaa
    20221 aacgctgaaa tcatgattga aaaagaagaa gatcaaaaag aaaaagtatt agaaatgtct
    20281 attgaagaat tagacttatc tgtacgttca tataactgct taaaacgcgc aggaatcaat
    20341 tctgttcaag agttagctga caaatctgaa gctgacatga tgaaagtgcg taatttaggt
    20401 cgtaaatctt tagaagaagt taaatacaaa ttagaagatt taggattagg attaagaaaa
    20461 gaagattgat aaaggaggtt aactcatggg ttacagaaaa ttaggtcgta cttctgatca
    20521 acgtaaagct atgttacgtg acttagctac atcacttatt attagtgaac gtattgaaac
    20581 tacagaagct cgtgcaaaag aagttcgcag tgttgttgag aaattaatca ctttaggtaa
    20641 aaaaggagat ttagcttctc gtcgtaatgc agctaaaact ttacgtaatg ttgaaatctt
    20701 aaacgaagat gaaactacac aaactgcact tcaaaaatta tttggtgaaa tcgcagagcg
    20761 ttacacagaa cgtcaaggtg gttacactcg tatccttaaa caaggccctc gtcgcggtga
    20821 cggtgctgaa tcagtaatta tcgaattagt ataagaattt gtataaatac actaactact
    20881 tttatataaa gcaaatgagt gcaacgataa tgtttgccac atacaaatat tgtctagctc
    20941 agagtacccc atcaactaaa taaagattta aagcgtgaac tcaacaaact tatgatgggg
    21001 tgcgcgcttt tttattgtat aagctatcgg acttttgaac agaaatgttt acaagtccga
    21061 tttctttata tctacttttt tgagtgtgaa tctaaaaata tgatcaagct agtttgatca
    21121 atttctctag aactgaatga agtgaaagta ctatcgttga atcaaacgcg gccaacccta
    21181 tgttagtaaa tcatttattt tattaacgtt tattcataat tgttagagag gaataaatgt
    21241 ccttatcatt agttgttaaa caacccttta atgattagaa atgagtcaga aaatactagt
    21301 aatatatagc aaacccagtc aatgtcatat acagcgattt ataaatattg taaaatatga
    21361 tagatacacg aatcgtaaag gagagagaca agtggaggat aagaattcag ttattgtatt
    21421 taaaaatgtt tcatttcaat atcaaagtga tgcatccttc acattgaaag atgtttcttt
    21481 taatatacct aaaggtcagt ggacatctat tgttggtcat aacggttctg gaaaatctac
    21541 aattgccaag ttaatgattg gcatagagaa agttaaatct ggagaaattt tttataataa
    21601 tcaagctata acagatgata attttgaaaa gttaagaaaa gacataggaa ttgtatttca
    21661 gaatccggat aatcaatttg ttggttcaat tgtaaaatac gatgtggcat ttggactcga
    21721 aaatcatgcg gttccacatg acgaaatgca tagaagagtc agcgaagcac ttaaacaagt
    21781 tgatatgtta gaacgtgcag attatgaacc taatgcatta tctgggggcc agaagcagcg
    21841 tgtggctata gcaagtgtat tagcacttaa cccctctgtc attatattag atgaggcgac
    21901 ttctatgtta gatcctgatg cacgtcaaaa tttattggat ttagtgagaa aagttaaatc
    21961 agaacataat attacaatca tttctattac gcatgattta tctgaggcga tggaagcaga
    22021 tcatgttatc gttatgaata aagggactgt atataaagaa ggtacagcga ttgaaatttt
    22081 cgaccatgca gaagagttaa caacaatagg tttagatttg ccattcccaa tcaaaataaa
    22141 tcaaatgctg ggataccaaa catcattctt aacttatgaa gggctggtgg atcaactatg
    22201 actatacgct ttgacaatgt aagttatacc tatcaaaaag ggacaccata ccagcatcaa
    22261 gctattcatg atgttaatac agaatttgaa caaggtaaat attacgccat cgttggacaa
    22321 acgggtagtg gtaaatcaac attgatacaa aatattaatg cactgttaaa gccaactact
    22381 gggacagtta cagttgatga cattactatt acacataaga ccaaagataa atatattaga
    22441 cctgtaagaa aaagaattgg aatggtattt caatttcccg aatctcaatt atttgaggac
    22501 acagtagagc gtgaaatgat atttggacct aaaaacttta aaatgaattt agatgaagcc
    22561 aaaaactatg cccatcgtct gttgatggat ttaggttttt caagagatgt aatgtcacaa
    22621 tcaccatttc aaatgtcagg tggacaaatg cgtaaaatag cgattgtatc gatattggca
    22681 atgaatcctg atattatcgt ggttgatgaa cccacagcag gacttgatcc acaaagtaaa
    22741 cgacaagtaa tgcgattact aaagtcacta caaacagatg aaaataaggc aattatccta
    22801 atttcacatg atatgaatga agtcgcgcgt tatgcagatg aagtcatcgt tatgaaagaa
    22861 ggtagtatag tgtcgcaaac atcaccaaaa gagctcttca aagataaaga aaaattggcg
    22921 gattggcata ttggtttgcc agaaattgtt cagttacaat atgactttga acaaaaacat
    22981 caaacaaaat taaaagatat tgccttaact gaagaagcat ttgtaagctt gtataaggag
    23041 tggcaacatg aaaaataaat tgattatagg gcgatattta ccaattaatt cttttgttca
    23101 tcatcttgat ccaagagcaa agttaatgtt tgtttttctt tttattatat taatattttt
    23161 ctgtcattca ccattaacat atctttgggt gtttgcactt atattattct ttatgagatt
    23221 agcaaaaatt caattatggt tcctaatcaa aggtttaacg ccaatatttt tctttttaat
    23281 cttcacatta atgatgcata tatttttaac taaaggtgga tatgtattag ttgaatggca
    23341 tggcatcacg attgaaacta atggtatttt agaagggcta tatatatcac tgcgtttaat
    23401 tggtattgtg atgattgcaa caattatgac actatctaca agtccaattg atttaacaga
    23461 tgcgtttgaa agattacttg caccactaaa gatgtttaaa ttaccagttc atcaattaag
    23521 tatgataatg tccattgcgt tacgattcat cccgacgtta atggatgagt tagataaaat
    23581 cattttggcg caaaagtcgc gtggctctga aataagttca gggaacattg caacacgtat
    23641 taaatcattt attccattac tagtgccact attcatctca gctttccaac gtgcagaaga
    23701 attagcggtt gcaatggaag ttaggggtta tgatgccaat gttcaaagaa cgagctacag
    23761 acagcttaaa tggcaattga gagatacatt atctttaatc atgattatcc catttgcaat
    23821 tattttattc gtattaaaat attcaggagt gtaaattcat gcgtatatta gtagaaattg
    23881 cgtatcaagg aaataatttt ctaggttttc aaattcaaca aaatggtcga acggtacagc
    23941 aacaatttga aaagctatta caacgcatgc ataaaagaca tgtgagaatc catccttcaa
    24001 gtaggactga tagaggtgta catgcgatac agcaatactt tcatttcgac acagagctga
    24061 atatacctat gtcacaatgg caatatgcaa tgaaccgaac gttacctgat gatatttatg
    24121 tcaacaatgt agttacagtc gatgacgatt ttcattgtcg ttacgattgt gttggtaaac
    24181 gctatcgata taaagtatat caagcacaac accgcgatcc atttcaaagt ggtttgaaaa
    24241 cattcattcc tgaaacgttg gatttagata aaatgaacag agcggcacaa caattcatag
    24301 gtacacatga ttttacgggt ttttgttcgc aaaaaactga agtagaaagc aaagttagaa
    24361 cattatacca aagtgaaatt gtgaaaaccg atgatggctt tgattatatt gtcactggat
    24421 ctggattttt atataacatg gtgcgtgtct tagttgcatt tttaatagaa gtcggaaaag
    24481 ggcgtcacga agtatctgat gtaccaaaac ttcttgaatc aaagaatcgt aagaatgtac
    24541 cttttactgc accggctgaa ggattatatt tagagaaaat ttatttagat gaaaatgagt
    24601 tattaaaaga ctttggtaac gatatcaaaa tacatcgtaa aaaatcatta caaaatgact
    24661 gattgccatt gacaaaaagc ttgtgaaatt ataagattat taacggtatt gttttatatc
    24721 caccccacga taagccccgg aaacttattg tgttacaaga tatataagca gaaacgaaca
    24781 acagttaaca aaataaatga aattaaacgt tttaaaaatg aaacaaatga aatcatctat
    24841 taggttatga aactgtttat agcttgaata gaagcattta ttttttagga ggacaattat
    24901 tatgcgtcaa acatttatgg caaatgaatc aaacattgag cgcaaatggt atgttatcga
    24961 tgctgaaggc caaacattag gtcgtttatc atcagaagta gcatctatct tacgcggtaa
    25021 aaataaagca acttacacac cacacgttga tactggtgat tatgtaatcg ttattaatgc
    25081 atcaaaaatc gaatttactg gtaacaaaga aactgacaaa gtttactacc gtcactcaaa
    25141 tcacccaggt ggtatcaaat caatcactgc tggtgaatta agaagaacta atccagaacg
    25201 tttaattgaa aactcaatta aaggtatgtt accaagcact cgtttaggcg aaaaacaagg
    25261 taaaaaatta tttgtatatg gtggcgctga acatccacac gctgcacaac aaccagaaaa
    25321 ctacgaatta cgtggttaat tagaaggagg aaatgacttt ggcacaagtt gaatatagag
    25381 gcacaggccg tcgtaaaaac tcagtagcac gtgtacgttt agtaccaggt gaaggtaaca
    25441 tcacagttaa taaccgtgac gtacgcgaat acttaccatt cgaatcatta attttagact
    25501 taaaccaacc atttgatgta actgaaacta aaggtaacta tgatgtttta gttaacgttc
    25561 atggtggtgg tttcactgga caagctcaag ctatccgtca cggaatcgct cgtgcattat
    25621 tagaagcaga tcctgaatac agaggttctt taaaacgcgc tggattactt actcgtgacc
    25681 cacgtatgaa agaacgtaaa aaaccaggtc ttaaagcagc tcgtcgttca cctcaattct
    25741 caaaacgtta agctgcaact gttgcgaact tgttcgttta cagatggagt tcgcaaattg
    25801 cgtcagcaat ttgtgttcaa ctgaagaaac gtttacaaca ctctttggat tattccaaag
    25861 agtgtttttt gtatttttat agagtcattt agacaccatt tagttacccc tagggaacta
    25921 atttgtttca attctgctta aaattcaatg atatgaaact ttaggaaacc atatgaaatg
    25981 accttgtttt tctttgggat tcgtacgaca agtagataga ggttgtaatg atattcgata
    26041 gatatcgtat tgaatgtttg caaactgagg ttgaaggaca gctttcgagt aaaaaggaaa
    26101 attttcgagt aactcaaaag aaaaatataa aaaaatcatg agaaaccaat gatatcaagc
    26161 gttttgtgag ctttcgagta aagaggataa ttttcgagta actcaaaaga aaatactaaa
    26221 aaatcatggg aaatcattga tatcaagggt tttgtgagct ttcgagtaaa gaggcggatt
    26281 ttcgagtagt attatttaat aagaattaca ggttaaataa aatacctact aatcagaagg
    26341 tgacagagat tgtagaattt ctatcagatg gaaagttagc aagtaggcta gaaattcaag
    26401 aaacaatggg acttcaaaaa agttatacat ctgagttaat tgctgaactg aagaagttag
    26461 agattatcgg atctgaaggt agaggtctgg gaactagata ttatttaatt agagactaat
    26521 aaattcatca agtgataacc ggacgataac ctattgatat acataaaaac attgataaat
    26581 caatatattt acgaccggac gataaccgga cgatacgaga gtatatacca ccggacagca
    26641 gtttatttag ttacccttta gttaccccgg agtgatattt ggtgcaatac tatgcaatcg
    26701 aaaaaatcag aaatcctata atatcatgcc ttaagacaat atatgcaact atacgaaacc
    26761 ctaaagtaaa tcaggtctta aagcagctcg tcgttcacct caattctcaa aacgttaatt
    26821 gtcggacgat atatacacaa aacacctcga tgttatgtcg aggtgttttt ttgcgtttgt
    26881 gtggggaata tgaaaagtat gtagtataaa tgaacgttcc tttatttaat gtctcaggaa
    26941 tagaataaat tcaactatga attattgatt tacacgtata atttgtacat gcttacacaa
    27001 tcaaaagtgt acattattaa attgtcattt agcttgcgga ggacggacga taaccggtcg
    27061 ataatgttct aatcatagtg gttcaaggga aagggctatc ggatgaaaac cggacgataa
    27121 ctcaagaacc atgatttaag agtgttatca aaataaggag tgacttaatt gaaagattct
    27181 atattttgga agaaagcttt tattcctgtt tattttattg ttgcgatgct ggtgtttcta
    27241 ctttttaggt tttatattaa aacagacaac ttttctatgt atttaatgat tatcttctta
    27301 atttgtttag gaactgcatc tatcatttat aactataaaa acaatcgata aatataagta
    27361 tgaaatgaat aagtcacaat tagatctaag tcttgctgtg gcttttttta tcgaaatgac
    27421 aatttcatgt tgctataaaa cagcattttc aaaccgtcat aaaacaacat tttcagcccg
    27481 tcataaaaca acattttcag cccgccataa aacgacaatt tcaaaccgcc attgactaaa
    27541 cacctcattc ccaaatatgc taacaatcct ccacatcaat caatccgaca ttcttcatta
    27601 tcacactgca caaaatctac tcatgcattt ttggaatact tagtattaca aataacgatt
    27661 tttattcatc ttacaaagga tatataatgt actgaaggca atttttatgt attacaaatc
    27721 taatcgtaca tgtaaaattt tgaaaaacat cattaatttt gcgtaactat cattagatta
    27781 caaatcacaa tgcaattaca tgtaatacac atctacacat cacatttgaa gggaaatgaa
    27841 tataaatgac tgataaaaag tacactgcag ccgatatggt tattgatact ttaaaaaata
    27901 atggggtaga atatgttttt ggtattccgg gtgcaaagat agactatcta tttaatgctt
    27961 taattgatga tggtcctgaa cttattgtca cgcgtcatga acaaaatgcc gcaatgatgg
    28021 cgcaaggtat tggaagatta acaggcaaac ctggtgtagt acttgttaca agtggccctg
    28081 gtgtaagtaa tttaacgact ggactattaa cagctacatc tgaaggggat cctgtattag
    28141 cgttaggtgg ccaagtgaaa cgtaatgatt tattacgatt aacgcatcaa agtattgata
    28201 atgctgcgct attaaaatat tcatcaaaat acagtgaaga agtacaagat cctgaatcat
    28261 tatcagaagt tatgacaaat gcaattcgaa ttgctacttc aggaaaaaat ggcgcaagtt
    28321 ttattagtat tccgcaagac gttatttctt caccagctga atctaaagcg atatcacttt
    28381 gccaaaaacc aaatttagga gtaccgagtg aacaagatat taatgatgtc attgaagcga
    28441 ttaaaaatgc atcatttcct gttttattag ctggtatgag aagttcaagt gcagacgaaa
    28501 caaatgccat tcgcaaatta gttgagcgca cgaatttacc agttgtagaa acattccaag
    28561 gtgcaggttt aattagtcgt gaattagaaa atcatttctt tgggcgagtg ggtttattcc
    28621 gtaatcaagt tggtgatgaa ttattacgta aaagtgattt agttgttaca atcggttatg
    28681 atcctataga atatgaggct agtaactgga ataaagaatt agatacgcaa ataatcaata
    28741 ttgacgaagt tcaagctgaa attactaatt atatgcaacc gaaaaaagag ttgattggta
    28801 atattgctaa aacgattgaa atgatttctg acaaagtaga tgaaccattt ataaatcaac
    28861 aacatttaga tgaattagaa cagttaagag cgcatattga tcaagaaact ggtattaaag
    28921 cgacacatga agaaggcatc ttacacccag ttgaaattat agaatctatg caaaaggtat
    28981 taactgatga aacaacagtg acagttgatg ttggtagtca ctatatttgg atggcacgta
    29041 atttcagaag ttacaatcca agacatttat tatttagtaa cggtatgcaa acacttggtg
    29101 tagcattacc gtgggcaatt tcagctgcac ttgtacgccc taatacgcaa gttgtatccg
    29161 ttgctggcga tggaggcttt ttattttcat cacaagattt agaaacggcc gtacgtaaaa
    29221 atctaaacat tattcaactt atttggaacg atggaaaata taacatggtt gaattccaag
    29281 aagaaatgaa atataaacgt tcatcaggtg tcgacttcgg tcctgtagat ttcgtaaaat
    29341 atgctgaatc atttggcgca aaaggtttac gagttactaa tcaagaagaa ttagaagcgg
    29401 caattaaaga ggggtatgaa acagatggcc cagtattaat tgatatacct gtaaattaca
    29461 aagataatat caaactttca acaaatatgt tacctgacgt atttaactaa aatacagata
    29521 aatgttaatg aggagtggga aattttatgg ctagtgtttt atatcaacat ggtacattag
    29581 gcacattaat ggcaggttta ttaaaaggaa ctgcatcaat aaatgaatta ttgcagcatg
    29641 gtgatttagg tatcgctaca ctaacaggtt caaatggtga ggtcatcttt ttagatggaa
    29701 aagcctatca tgcaaatgaa cacaaagaat ttgtggaatt aaaaggtgat gagttaacac
    29761 catatgcaac tgtaactaaa ttcgtagcag atacaagcta tgaaacgaaa gataaatctt
    29821 ctgaagcagt ttttgcagaa attaaggaaa agatgttgag tgaaaattta ttttctgcag
    29881 taaaaatttc aggcttattt aaaaaaatgc atgtacgtat gatgccggct caagagccac
    29941 catatacacg tttaattgat tcagctagaa gacaacctga acaaactgaa acgtacgtca
    30001 aaggttcagt tgttggtttc tttacaccag aattattcca tggtattgga tcagcaggtt
    30061 tccatgtaca ctttgccaat gatgatcgta actttggtgg gcatgtctta gactttgaag
    30121 tagaagatgt taaagtagaa atccaaaata ttgaaacatt tgaacagcat tttccaattc
    30181 atgatgaaga tttcactaat gcaaatattg actataaaga tatttcagat gaaattagag
    30241 aagctgaata acattaactg tataatgaat gcgtaaatgt attatcagtt tatgaaaatt
    30301 gacttcataa tgcgcgattt agaaatggta gtttgttaat atgattaatc atgactacaa
    30361 tagaacaaat atatttatga ttacgtctat gtaataaaat aaatcccttc actattagct
    30421 gtagtgaggg gatttattta ggtttcagat atttgagatt tgctgttatg tttagattat
    30481 aaattgagga agacaataat atagaattta ctttagtata ggccaatcta ttgtctggag
    30541 aagcaaacaa caataatttg caagttcaat aactaaaaag acaaacgcca atttttcagc
    30601 gcttgcccta taaaactatt ttcaaattat tatttaacta caatttgtat ttgtttgatt
    30661 gtacttggat caattgaatt tttagcatcg tcatttttct ttagattcac tactttttta
    30721 ttaccatcat tcaaagtaag tgtataagtt gctgtttgtg cattattaat tttttctgtt
    30781 gtaacaccac gttgagaagc taattcattt tttactttac tgtcaatttc ttgataaagt
    30841 acctttttat tttctggaaa aacaaagtaa gttcgatgta atgcagtaat accatctact
    30901 gaaatcgtgt aaggaacagt gtgataacca tccattgtca tttctttata gccgttatta
    30961 ctatctgcag atgcttcgtg actaggtaat gcagctccga ccgttgataa taatcccaat
    31021 gctaaagtgg cagtaacaaa tgattttagt ttcatatctc aatctccttt taaaattgtg
    31081 gtatattaca ctatttatat aacacgtttc ataaagttta aaacatactt tttgattttt
    31141 ttatattttt gatttttagt aatagttttt aacgagggat atgacccgtg tattttgaaa
    31201 agtggtaagc aatgttttta gtttataggg attcattagt tgtatataat aagcatgaaa
    31261 agcatatagt cgatcttata cttttaattg agacttatag tgtatttaag ttatagataa
    31321 attcattaaa atattatgga ggaatgagta tgtcaaagcg tctattattg tttgattttg
    31381 atgaaacata ttttaaacat aatacaaatg aagaagattt aagtcattta agagaaatgg
    31441 aaaaattgtt ggaaaaacta actaataata atgaagtgat cactgctgta ttgacaggaa
    31501 gtacatttca aagtgtcatg gataaaatgg atcaagttaa tatgacgttt aaaccattac
    31561 atatcttttc tgatttgagt tctaaaatgt tcacttggaa taatggcgaa tatgttgaat
    31621 cagaaacata taaaaagaaa gtcttgagcg aaccattttt atttgaagat attgaggata
    31681 tattacgtca tatttctgcg caatataatg tcgaatttat tccacaaaga gcatttgaag
    31741 gtaatgaaac acattataat ttttattttc attcaacagg taatcacaac aatgataggc
    31801 gtattctaga agcacttgtc agatacgcaa atgaccaaaa ctatacagcg agatttagtc
    31861 gaagcaatcc attagctggt gatcctgaaa atgcgtatga tattgacttt acaccgtcaa
    31921 atgctggaaa attatatgct actcaatttc tgatgaagaa atataatata cccgtaaaat
    31981 caatattagg ttttggagat agcggcaatg acgaagcata tttaagctat cttgaacatg
    32041 cctatttgat gtcgaatagt agagatgaag cattaaagca gaaatttaga ttaacaaaat
    32101 atccatatta tcaagggata acactgcatg ttaaagaatt tgttgaaggt aagtatgatt
    32161 attgattggt tgagtgatat gtatactttt taagtgcaaa tattaatatt taaaatttga
    32221 ggaatgatta gataatatgg tgaatcgact acactttagt tttaaaaaat ttatttgtaa
    32281 gttgatttgt ctaactaagt gtagacgatt catagtttaa tcaatatatt tgaatacttt
    32341 gtaaattaaa taaacattta atattgatac tattgaagat atagagggct ttgatctcta
    32401 ttggcttttt tcatcgatta attcaatcca ttttttggat actgcttcgt aagaaaagtt
    32461 tgtctttatt gttgttctag cattttcaga aaactgagat atcaatgttt ctttttttaa
    32521 tacatgaatt attttttttg ccaattcatt aatattatcc ttcttttttg ttattattcc
    32581 atttatatta ttttggatta tagatttagg accataatta ataggatatg aaataactgg
    32641 aacaccgtaa ctcatggcct ctagtaaact cattgggaga ccttcataat ctgatgtcag
    32701 tacacttaga gaggtttttg tataaagagc acgtatgtca aatgcgtaat catggatgaa
    32761 cacattatct tgcaatttaa gttttttaat aagttttgtg taattttctt tttgcgtacc
    32821 ggtaccgtat atgtgtaact taacatcctt tacttttttt cttacaatat ttatagcgga
    32881 aatgatatgt gtgatatttt tcatagctac aaatctttgt aatacaataa tagaattttt
    32941 ttctcgaata ttttgtgtta a
//
LOCUS       DAKPJH010000020        30886 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.020, whole genome shotgun sequence.
ACCESSION   DAKPJH010000020 DAKPJH010000000
VERSION     DAKPJH010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30886
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.020"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            55..1173
                     /gene="ald"
                     /locus_tag="OY092_000796"
     CDS             55..1173
                     /gene="ald"
                     /locus_tag="OY092_000796"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HCX1075764.1"
                     /translation="MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSG
                     FSDDMYEKEGAKIVTHEQAWEADLVIKVKEPHTSEYQYFKKDQIIWGFLHLASSKEIV
                     EKMQEVGVTAISGETIIKNGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGV
                     HENVDIPGSTYVIFGGGVAATNAANVALGLNAKVIIIELNDDRIKYLQDMYAEKDVTV
                     VKSTPENLAEQIKKADVFISTILIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTI
                     ETIRPTTISDPVYEEEGVIHYGVPNQPGAVPRTSTMALAQGNIDYILEICDKGLEQAI
                     KDNEALSTGVNIYQGQVTNQGLATSHDLDYKEILNVIE"
     gene            1268..2308
                     /gene="tdcB"
                     /locus_tag="OY092_000797"
     CDS             1268..2308
                     /gene="tdcB"
                     /locus_tag="OY092_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HCX1075765.1"
                     /translation="MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQS
                     ITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKL
                     LGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYD
                     DKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSEN
                     VHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAM
                     KDLMQRAKIITEGAGALPTAAILSGKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHG
                     LNIADTSKGVVG"
     gene            2339..3661
                     /locus_tag="OY092_000798"
     CDS             2339..3661
                     /locus_tag="OY092_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1075766.1"
                     /translation="MSNGKELQKNIGFFSAFAIVMGTVIGSGVFFKISNVTEVTGTAG
                     MALFVWFLGGIITICAGLTAAELAAAIPETGGLTKYIEYTYGDFWGFLSGWAQSFIYF
                     PANVAALSIVFATQLINLFHLSIGSLIPIAIASALSIVLINFLGSKAGGILQSVTLVI
                     KLIPIIVIVIFGIFQSGDITFSLIPTTGNSGNGFFTAIGSGLLATMFAYDGWIHVGNV
                     AGELKNPKRDLPLAISVGIGCIMAVYLLINATFLLTLPIELLAGNLNAASDTSKILFG
                     ENGGKIITIGILISVYGTINGYTMTGMRVPYAMAERKLLPFSHLFAKLTKSGAPWFGA
                     IIQLIIAIIMMSMGAFDTITNMLIFVIWLFYCMSFVAVIILRKREPNMERPYKVPLYP
                     IIPLIAILAGSFVLINTLFTQFILAIIGILITALGIPVYYYKKKQKAA"
     gene            3817..5208
                     /gene="norB"
                     /locus_tag="OY092_000799"
     CDS             3817..5208
                     /gene="norB"
                     /locus_tag="OY092_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorB"
                     /protein_id="HCX1075767.1"
                     /translation="MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSF
                     NTDIGTVNIAVSITALFSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIP
                     LLLILGRLIQGLSAACIMPATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGA
                     VATLLGWRWIFILSIIISLIALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNI
                     LITKGSELGVTSLLFITLLAIAIGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASN
                     FLLNGVAGTLIVANTFVQRGLGYSSLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKP
                     MLIGTGVLIVGECLISLTFLPEILYVICCVIGYLFFGLGLGIYATPSTDTAIANAPLE
                     KVGVAAGIYKMASALGGAFGVALSGAVYAIVSNMTNIYTGAMIALWLNAGMGILSFVI
                     ILLLVPKQNDTQL"
     gene            5606..30886
                     /gene="ebh"
                     /locus_tag="OY092_000800"
                     /pseudo
     CDS             5606..30886
                     /gene="ebh"
                     /locus_tag="OY092_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hyperosmolarity resistance protein Ebh"
BASE COUNT        12149 a         5442 c         5653 g         7642 t
ORIGIN      
        1 ccacaagata aaatgattgt gaaataattc acaaaatcaa aaggagtgtt gcaaatgtta
       61 gttgcagtag tcaaagaatt aaaacaaggt gaaggacgtg tagcttgcac acccgaaaat
      121 gtgcgtaagt taacggatgc aggacataaa gtaattgtag aaaaaaatgc tggcattggt
      181 tcaggatttt ctgacgatat gtatgaaaaa gaaggcgcta agattgtaac tcacgaacaa
      241 gcatgggaag cagatctggt tatcaaagta aaagaaccac atacaagtga atatcaatat
      301 tttaaaaaag atcaaatcat ctggggattc ttacatttag catcttcaaa ggaaatagta
      361 gaaaaaatgc aagaagttgg tgttactgct attagtggtg aaaccattat aaaaaatgga
      421 aaagcagaat tattagcgcc aatgagtgct atagcaggtc aacgctcagc aattatggga
      481 gcttactact ctgaagcaca acatggtggt caaggtactt tagtgactgg tgtacatgaa
      541 aatgtggata tacctggtag tacatatgtg attttcggtg gtggcgtagc agcaacaaat
      601 gcagcaaatg ttgccttggg actaaatgct aaagtaatca ttatcgagtt aaacgatgat
      661 cgcattaaat atttacaaga catgtatgca gaaaaagatg tcacagtagt caaatcaaca
      721 ccagaaaatt tagcagaaca aataaaaaaa gcagatgtat ttatttctac aattttaatt
      781 ccaggtgcga aaccgccaaa attggttact cgtgagatgg ttaaatcaat gaaaaaaggt
      841 tcagtattaa tcgatatagc tattgaccaa ggtggaacta ttgaaacaat tagaccaact
      901 acaatttctg atccagtgta tgaagaagaa ggtgtgattc attacggtgt accaaaccaa
      961 ccaggagcag tcccaagaac ttcaacaatg gcattagcac aaggaaatat tgattatata
     1021 ttagaaattt gtgacaaagg cttagaacaa gcaattaaag ataatgaagc cttaagtact
     1081 ggtgtaaaca tttaccaagg acaagtgaca aatcaaggat tagctacatc acatgaccta
     1141 gattataaag aaatattaaa tgttatcgaa tagatagtaa tttaaatgaa attgagtgaa
     1201 atgaatattt taaatatagc attatagttt ggactaaaaa tttacaaaac ggaaggatgt
     1261 aattattatg acaaccaaca cagttacatt acaaacagca catattgtaa gtttaggaga
     1321 tatcgaagaa gctaaagcaa gcattaaacc atttattcgt cgaacacctc taattaaatc
     1381 aatgtattta agccaaagta taactaaagg gaatgtattt ctaaaattag aaaatatgca
     1441 attcacagga tcttttaaat ttagaggcgc tagcaataaa attaatcact taacagatga
     1501 acaaaaagaa aaaggcatta tcgcagcatc tgctgggaac catgcacaag gtgttgcttt
     1561 aacagctaaa ttattaggca ttgatgcaac tatcgtaatg cctgaaacag caccacaagc
     1621 aaaacaacaa gcaacaaaag gctatggggc aaaggttatt ttaaaaggta aaaactttaa
     1681 cgaaactaga ctttatatgg aagaattagc gaaagaaaat ggcatgacaa tcgttcatcc
     1741 atatgacgat aagtttgtaa tggcaggcca aggaacaatt ggtttagaaa ttttagatga
     1801 tatttggaat gtgaatacag tcatcgtacc agttggcggt ggaggattaa ttgcaggtat
     1861 tgccaccgca ttaaaatcat ttaacccttc aattcatatt atcggtgttc aatctgagaa
     1921 tgttcatggt atggctgagt ctttctataa gagagattta actgaacatc gagtggatag
     1981 cacaatagca gatggttgtg atgtaaaagt tcctggtgaa caaacatatg aagtagttaa
     2041 acatttagta gatgaattta ttcttgttac tgaagaagaa attgaacatg ctatgaaaga
     2101 tttaatgcag cgtgccaaaa ttattactga aggtgcaggc gcattaccaa cagctgcaat
     2161 tttaagtgga aaaataaaca ataaatggct tgaagataaa aatgttgttg cattagtttc
     2221 aggcgggaat gttgacttaa ctagagtttc aggtgtcatt gaacatggac tgaatattgc
     2281 agatacaagc aagggtgtgg taggttaaaa catttaatct taaaaatgag gtgtaattat
     2341 gtcaaatggt aaagaattac aaaaaaatat aggtttcttc tcagcgtttg ctattgttat
     2401 ggggacagtt attggttcag gagtattctt taaaatatca aacgtaacag aagtaacagg
     2461 aacagcagga atggccttgt ttgtatggtt cctaggcggc atcattacca tttgtgcggg
     2521 gttaacagca gcagaacttg ctgctgcaat ccctgaaaca ggtggcttaa cgaagtatat
     2581 agaatataca tacggtgatt tctggggctt cttatcaggc tgggcacaat catttattta
     2641 ttttccagca aacgtagcag cattgtctat cgtatttgcg acacagttaa ttaatttatt
     2701 ccatttatct ataggttcat taataccaat agcaatcgca tctgcgttat ctattgtgtt
     2761 gataaatttc ctaggttcaa aagcaggtgg aattttacaa tcagttacat tagtaattaa
     2821 actgattcca atcatcgtta tcgtaatttt tggtattttt caatctggag atatcacttt
     2881 ttcattaatt ccaactacag gtaattcagg aaatggtttc tttacagcaa ttggtagtgg
     2941 tttattagca actatgtttg catatgatgg ttggattcat gtaggaaatg ttgcggggga
     3001 acttaaaaat cctaaacgcg atttaccttt agcgatttca gttggtatcg gttgtattat
     3061 ggctgtgtat ttattaatta acgctacatt cttattaacg ttgccaattg aactacttgc
     3121 tggtaattta aatgcagctt cagatacatc aaaaatatta tttggtgaaa atggcggtaa
     3181 gattattaca attggtatat taatttctgt ttatggtacg atcaatggct atactatgac
     3241 tggtatgcgc gtaccatatg caatggctga aagaaaatta ttgccattta gccacttatt
     3301 cgcaaaatta acaaaatctg gcgcaccatg gtttggcgca attatacaac ttataatcgc
     3361 tatcatcatg atgtcaatgg gagcatttga tacaattaca aacatgttaa tctttgttat
     3421 ttggttgttc tattgtatgt catttgttgc ggtaataatt ttaagaaaac gtgaaccaaa
     3481 tatggagcga ccatataaag taccgttata tccaatcata cctttaattg ctattttggc
     3541 aggatcattt gtattaatta atacactgtt tacacaattt atactagcaa ttattgggat
     3601 tctaatcaca gcacttggta taccagttta ttactataag aagaaacaaa aagcagcata
     3661 aggtaagata actagcattg agaataaatg gatggactac taataaattt aaagttttac
     3721 acattaaaat caaaaaccat tcaattattc tatcgaacag acaaatttct gttatggaat
     3781 ttgtctgttt tcaaaagtat agggaggcaa atagagatgg aaaagccgtc aagagaggca
     3841 tttgaaggca ataataagtt gttaatagga attgttttaa gtgtaataac gttttggcta
     3901 tttgcacaat cattggttaa tgttgtacca atacttgaag atagtttcaa tacagatatt
     3961 ggaacggtaa atatcgccgt tagtataact gctttatttt caggaatgtt tgtagtagga
     4021 gcaggtggtc ttgctgataa atatggcaga attaaactca cgaacattgg tattatctta
     4081 aatatattgg gttcattatt aatcattatt tcaaatattc ctttattact tattttagga
     4141 agattaattc aaggactttc agcagcatgt attatgcctg caactttgtc tattattaag
     4201 tcatattaca ttgggaaaga tagacaacgc gctttaagtt attggtcaat tggctcatgg
     4261 ggcggctcag gtgtttgttc attttttgga ggtgcagttg caacgctttt aggttggcgt
     4321 tggattttca tcctatcaat tataatttca ttaattgcgc tatttcttat taaaggcaca
     4381 cctgaaacta aatctaaatc gatttctcta aataaatttg acattaaagg tctggttctt
     4441 ttagtcatta tgctcctcag tttaaacatt ttaattacta aaggatcaga attaggtgta
     4501 acctcacttc tttttatcac tttattagca attgcaattg gatcttttag tttatttata
     4561 gttcttgaaa agcgtgctac aaatccttta atcgatttta aattatttaa aaataaagct
     4621 tatacaggtg caacagcttc aaactttttg ttaaatggtg ttgcgggaac attaatagta
     4681 gccaacacat ttgttcaaag aggtttagga tattcttcat tgcaagcagg aagtttatca
     4741 atcacttatt tagtaatggt actaattatg attcgtgttg gtgaaaagtt acttcaaaca
     4801 ctcggatgca agaaaccaat gttaattgga acaggagttc ttattgtcgg agaatgtctc
     4861 atttcattaa catttttgcc agaaatattg tatgtcattt gttgtgttat aggttattta
     4921 ttctttggtt taggactagg aatatatgct acaccatcaa cagatacagc aattgcaaat
     4981 gcaccgttag aaaaagtagg cgttgctgca ggtatctata aaatggcttc tgcattaggt
     5041 ggagcatttg gcgtcgcatt aagtggtgca gtttatgcaa tcgtatcaaa tatgacaaac
     5101 atttatacag gtgcaatgat tgcattatgg ttaaacgcag gtatgggaat tttatcattc
     5161 gttatcattt tgttacttgt gcctaaacaa aacgacactc aattatgata attgagaatt
     5221 aaattgaaat catataagtc gctacaatat taaacaaaaa tataaaccga ttcttatgtg
     5281 tcattatttt aaatgaacat agggattggt tttttattac tcttttacgc tactttattt
     5341 ataattatta taaattgtca caaattcaat ttaccttaca atatattttg tgttattata
     5401 ttctgtagca taaataaatt gttcaacaca tagttgtaat gtgtttcaat actttttgga
     5461 tagattgcga aattgtattg aatcgtcatc gttttaaatt tttaaatgag aatggaatga
     5521 gcattacaat acacaagcaa tcaaaagtaa atacattcac aacacaacag agacataaca
     5581 acaagataag gagtgaacaa tagctgtgaa ttatcgtgat aaaattcaaa agtttagtat
     5641 tcgtaaatat accgttggta cattttcaac ggtcattgcg acattggtat ttttaggatt
     5701 caatacatca caagcacatg ctgctgaaac aaatcaacca gcaagcgtgg ttaaacagaa
     5761 acaacaaagt aataatgaac agactgagaa tcgagaatct caagtacaaa attctcaaaa
     5821 ttcacaaaat ggtcaatcat tatctgctac tcatgaaaat gagcaaccaa atattaatca
     5881 aacaaaccat gtagatgtaa gtgcagaaca atcatctaca actgaaaatg aacaagcagt
     5941 atctcaaaat aagcaaacaa agaaagatac agcagatgct acgccaacac aatcggctaa
     6001 agcggaaagc aagcatgaac aaaatgaaag tcgttctgct aacaaaaaag aaaacgacaa
     6061 taaagcggct catgtagaaa atcatgaagc aaatgtagtc acagcttcag attcacctga
     6121 taatggtaac gtacaacatg accgaaatga actacaagca ttttttgatg caaattatca
     6181 tgattatcgc tttattgacc gcgaaaatgc agattctggg acatttaact atgtaaaagg
     6241 catttttgac aagattaata cgttattagg aagcaatgat ccaataaaca ataaagactt
     6301 gcaacttgca tataaagaat tggaacaagc tgttgcattg atccgcacta tgcctcaacg
     6361 tcaacaaact agccgacgct caagcagaat tcaaacgcgt tcagttgagt caagagctgc
     6421 agaacctaga tcagtatcaa gttatcaaaa tgcagactct tcatactacg ttgaaaatgc
     6481 taatgacggt tcagggtatc ctgtaggtac atatattaat gcatcaaaca aaggtgcgcc
     6541 attctatctt cctacagccc catggaatac tttgaaagca tcagctgcaa aagaaatagt
     6601 actgatcaca gcgaaacaaa ctggagacgg atatcaatgg gtaattaagt ttaacaaagg
     6661 tcatgcacca catgaaaata tgattttctg gtttgcttta ccgtcagatc aagtgccagt
     6721 tggacgtact gactttgtaa cagtgaatgc agacgggacg aatgtacaat ggagtaatgg
     6781 tgcgggagct ggtgcttaca aaccacttcc acaaatgtgg ccatatggtg taaatgactc
     6841 acgttcgcga gactttaaaa ttagaaatag aagcggacaa gttatttatg attggactga
     6901 tgttcatgta aatacattga gagacttagc gcgagcagga gattatttca gtgaagctgg
     6961 agcacccgct gcgactaaag ctatagggga acaaacgttt agatatatta atggtgaaag
     7021 accaacagaa tcccctggtg catcaaaagt ttatactttt attggtgctg gcgatgcaag
     7081 ttatacgatt tcatttaaaa cacaaggacc aacaacgaac aaattgtatt atgcagccgg
     7141 tggtcgtgct ctagaataca atcaattatt tatgtatagc caactatacg tagaatcaac
     7201 gcaagaccac caacaacgac ttgatggttt tagacaagta gttaatcgtt cttatcgttt
     7261 agatacaaca aaaagagtag aagtaagtca gggtaacatt caaactaaaa aagtacttga
     7321 aagtacaaac ctaaatatcg atgactttat ggatgatcca ttaagttatg ttaagacacc
     7381 gagtaataaa gtgttaggtt tttatccaac aaatgcgaat cccaatgcat atagacatgg
     7441 tggaactaat ccattaaatg aatatcaatt aagtcagtta tttactgatg ataaactaca
     7501 acaggcagct agaactggca atccaatacg attaatgatt ggatttgact atccagatgg
     7561 tcatggcaac gcagaaactt tagtaccagt taacttgacg gtattacctg aaattcaaca
     7621 taatattaaa ttttataaaa atgatgacac acaaaatatt gccgataaac cagcttcaag
     7681 acaagcagga catccaatct tctatgtata tgcaggtaat caagggaatg cttcagtgaa
     7741 tttaggtgga agcgtaacat ctattcaacc gttacgtatt aatttaacaa gtagtgaaaa
     7801 ttttacagat agagattggc aaataacagg tattccacgt acgttacaca ttgaaaactc
     7861 gacaaataga cctaataatg ccagagaacg taacattgaa ttggttggta atttattacc
     7921 gggtgactat tttggaacaa tacgttttgg ccgtaaagaa caattattcg aaatacgtgt
     7981 taagccacat acaccaacaa ttactacaac tgctgaacaa ctaagaggta cagcattaca
     8041 aaaagtgcca attacagtta cgaatattcc gttggaccca tcgtcattag tttatatcgt
     8101 ttatccaaca gatcaaacaa gagatggtgg atctgaagca gaccaaatgc cttcaaacta
     8161 ttcaatactg gcgactggta cacctgatgg tgtgcataat accataacaa tacaaccaaa
     8221 agactatact gtgtttattc ctccggtagg taaacaaatt agagcattga tttattacaa
     8281 taaagttgtt gcttctaata tgagtaatgc ggttactatt ttgccggatg atattccgcc
     8341 gacaattaat aatccagttg gcttaaatgc aaagtattat cgtggtgatg aagtcaactt
     8401 tacaatggga gtttcagata gacattctgg aataaaaaat acaactatta ctactttacc
     8461 gaatggttgg acatcaaatt taactaaagc ggataagaat aatggctcat tatctattac
     8521 tggtagagtg agtatgaatc aggcatttaa cagtgatatt acatttaaag tgtcagcgac
     8581 agataatgtc aataatacga caaatgatag tcaatctaaa catgtgacag tacatgtagg
     8641 taaaattagt gaagatgcgc atccaattgt attagcaaat tctgaaaaag ttgtcgttgt
     8701 aaatccgaca tctgtatcta atgatgaaaa acaacgaata attactgcat ttatgaataa
     8761 aaaccaaaat ataagaggtt atttagcttc atcaaatcca gttacagttg ataataatgg
     8821 taatgtcaca ttacattacc gtgatggctc atcaacaacg cttgatgcta caaatgtgat
     8881 gacatacgaa ccagttgtga aacctgaata tcaaactgcc aatgcaccta aaacggcaac
     8941 ggtaacaatt gctaaaggac aatcatttag tataggtgat attaaacaat atttcacttt
     9001 aagtaatgga caagcgattc caaatggaac atttacaaat attacttcgg acagaacgat
     9061 tccaacagca caagaagtta gtcaaatgaa tgcaggtaca cagttatacc atatcgtcgc
     9121 ttcaaacgcg tatcataaag acactgaaga cttatatatt agtttgaaaa tcatcgatgt
     9181 gaaacaacca gagggtgatc aacgtgtata tcgtacatca acatatgatt taactactga
     9241 tgaaatttca aaagtaaaac aagcatttat taatgccaat agggatgcga ttacgtttgc
     9301 agaaggagat atatcggtta caaatacacc aaatggtgcc aatgtgagta ccgttactgt
     9361 caatattaat aaaggtcgat taacgaaatc gtttacatca aaccttgcta atatgaattt
     9421 cttacgttgg gttaatttcc cacaagatta tactgtatct tggacaaatg cgaaaatcgc
     9481 tagtagacca actgatggtg gtttatcatg gtctgatgat cataaatcat taatttatcg
     9541 ctatgatgca acattaggta caccaattac gacgaatgat attttaacga tgttaaaagc
     9601 aacaacgaca gtgcctggat tgcgtaataa cattgccggt aatgagaaaa ctcaagctga
     9661 agctggtggc agaccaaact atagaccaac tggatattca caagcaaatg cttcatcaga
     9721 tgggcaacgt caatatacgt taaatggaca agtaatccaa gttctagata ttattaaccc
     9781 gacgaatggt ttcggtggtc aaacgattac aaactcaaat gttcgtgcaa accatagtaa
     9841 ttcaactgtt gttagtgtca atgaaccggc agctaatggt gcgggtgcat ttacaattga
     9901 tcatgtggta aaaaataata ctacgcataa tgcagctgat gcggtataca aagcgcagtt
     9961 atacttatct ccatatggac caaaacaata tgttgaacat ttaaatcaaa atacgggaaa
    10021 tactaccgat gctattaaca tttattttgt acctagtgat ctagtaaatc caactatttc
    10081 agtaggtaat tacgcaaatc atcaagtatt ctctggtgaa acatttacca atacgattac
    10141 agcgaatgat aactttggtg tgcaatctgt aactgtacca aatacatcac aaattacagg
    10201 tactgttgac aataatcatc agcacgtttc tgcaacagcg ccaaatgtga catctgctac
    10261 aaataaaacg atcaatttag tggcaactga tacaagcggc aatactgcaa caacgtcata
    10321 caatgtcaca attaaacctt tacgtgataa atatcgagtt ggaacatcat caacggctgc
    10381 taatccagtg agaattgcta atatttcgaa taatgcgata gtatcacaag ctgatcaaac
    10441 agcaattatt aattcattga cgtttactga aacagtacca aatagaagtt atgcaagagc
    10501 aagtgcaaat gaaatcacta gtaaaacagt tagtaatgtg agtcgtactg gaaataatgc
    10561 caatgtcaca gtaactgtta cttatcaaga tggaacaaca tcaacagtga ctgtacctgt
    10621 aaagcatgtc attccagaaa tcgttgcaca ttcgcattac actgtacaag gccaagactt
    10681 cccagcaggt aatggttcta gtgcatcaga ttactttaag ttatctaatg gtagtgccat
    10741 tccagatgca actattacat gggtaagtgg acaagcgcca aataaagata atacgcgtat
    10801 tggtgaagat ataacagtaa ctgcacatat cttaattgat ggcgaaacaa cgccgattac
    10861 gaaaacagca acatataaag tagtaagaac tgtaccgaaa catgtctttg aaactgacag
    10921 aggtgtttta tacccaggtg tttcagatat gtatgatgca aaacaatatg ttaagccagt
    10981 gaataattct tggtcgacaa atgcgcaaaa tatgaatttc caatttgtgg gaacttatgg
    11041 acctaacaaa gatgttgtag gtatatcaac gcgtcttatt agaatcacat atgataatag
    11101 acaaactgaa gaattaacta ttttatctaa agttaaacca gaccagaatt gatggcaact
    11161 ctgtaacata taaagcaggt cttacaaacc aagaagttaa agttaataac gtattaagta
    11221 actcgacggt taaattgttt aaagctgaca atacgccatt aaatgttaca aatattatcc
    11281 atggcagtgg ctatagttcg gttgtgacag taagtgatgc gttaccaaat ggtggaatta
    11341 aagcgaaatc ttcaatttca atgaacaatg tgacgtatac gacgcaagac gaacatggtc
    11401 aagttgttac agtaacaaga aatgaatctg ttgattcaaa tgatagtgct tctgttacag
    11461 taacaccaca attacaagca actactgaag gcgctgtatt tattaaaggt ggcgacggtt
    11521 ttgatttcgg acacgtagaa agatttattc aaaacccacc acatggcgca acggtcgcat
    11581 ggcacgataa tccagataca tggaagaata cagtcggtaa cactcataaa actgcggttg
    11641 taacattacc aagtggtcaa ggtacgcgta atgttgaagt tccagtcaaa gtttatccag
    11701 ttgctaatgc taaggcgcta tcacgtgatg tgaaaggtca aaatttgact aatggaacgg
    11761 atgcgatgag ctacattaca tttgatccaa atacaaacac aaatggtatc actgcagcat
    11821 gggcaaatag acaacaacca aataaccaac aagcaggcgt tcaacattta aatgtcgatg
    11881 tcacatatcc gggtatttca gctgctaaac gagttcctgt aactgtgaac gtatatcaat
    11941 ttgaattccc tcaaactact tataccacaa cagttggtgg cactttagca agtggtacgc
    12001 aagcatcggg atatgcacat atgcaaaacg ctactggttt accaactgat ggatttacgt
    12061 ataaatggaa taatgcagca acgggtacaa acgatgcaaa ctgggcagca atgaataaac
    12121 cgaatgcggc taaagtcgtt aatgcgaaat atgatgttat ctataatgga catacatttg
    12181 caacatctct accagcgaag tttgtagtaa aagatgtaca accagcgaaa ccaactgtga
    12241 ctgaaacagc ggcaggagcg attacaattg cacctggagc aaaccaaaca gtgaatacac
    12301 atgccggtaa cgtaacaaca tacgctgata aattagttat taaacgtaac ggcagtgttg
    12361 tgacgacatt tacacgtcat aataatacga gtccatgggt taaagaagca tcagcaacta
    12421 atgtaacagg tattgttgga acgaataatg gtattactgt tgcagcaggt actttcaatc
    12481 ctgctgatac aattcaagtt gttgcaacac aaggtagtgg tgaaacaatc agtgacgaac
    12541 aacgtagtga tgatttcaca gttgtcgcac ctcaaccgaa ccaagcgact actaagattt
    12601 ggcaaaatgg tcatattgat atcacgccta ataatccatc agggcattta attaatccaa
    12661 ctcaagcaat ggatattgct tacactgaaa aagtgggtaa tggtgcagaa catagtaaga
    12721 caattaatgt tgttcgtggt caaaataatc aatggacaat tgcgaataag cctgactatg
    12781 taacgttaga tgcacaaact ggtaaagtga cattcaatgc caatactatc aagccaaatt
    12841 cagcaattac cattacaccg aaagcaggta caggtcactc agcaagcagt aatccaagta
    12901 cattaactgc accggcagca catactgtca acacaacaga aattgtgaaa gattatggtt
    12961 caaatgtaac agcatctgaa attaacaatg cagttcaagt tgctaataaa cgtactgcaa
    13021 cgattaaaaa tggcacagca atgcctacta atttagctgg tggtagcaca acgacgattc
    13081 ctgtgacagt aacatacaat gatggcagta ctgaagaagt acaagagtcc attttcacaa
    13141 aagcggataa acgtgagtta atcacagcta aaaatcattt agatgatcca gtgagtacag
    13201 atggtaaaaa gccaggtaca attacgcagt acaataatgc aatgcataat gcgcaacaac
    13261 aaatcaatgc tgcgaaaaca gaagcgcaac aagtgattaa taatgagcgt gcaacaccac
    13321 aacaagtgaa cgcagcatta tctaaagtcc aagcagcaca aactaagata aatgaagcta
    13381 aagctttact tcaaaataaa gaagataata gccaattagt aacgtctaaa aataacttac
    13441 aaagttctgt gaaccaagta ccatcaactg cgggtatgac gcaacaaagt attgataact
    13501 ataatgcgaa gaaacgtgaa gcagaatcgg aaattacagc tgcacaacgt atcattgaca
    13561 atggagatgc aactgcacaa caaatttcag atgaaaaaca tcgtgtcgat aacgcattaa
    13621 cagcattaaa ccaagcgaaa catgatttaa ctgcagatac acatgcctta gagcaagcag
    13681 tgcaacaatt gaatcgcaca ggtacaacga ctggtaagaa gccagcaagt atcactgcgt
    13741 ataataattc aattcgtgca cttcaaagtg acttaacaag tgctaaaaat agcgctaatg
    13801 ctatcattca gaagccaata agaacagtgc aagaggtaca atctgcatta acaaatgtaa
    13861 atcgtgtcaa tgagcgatta acgcaagcaa ttaatcaatt agtaccttta gctgataata
    13921 gtactttaag aactgctaag acgaaacttg atgaagaaat taataaatca gtaactactg
    13981 atggtatgac acaatcatca atccaagcat atgaaaatgc taaacgtgcg ggtcaaacag
    14041 aatcaacaaa tgcacaaaat gttattaaca atggtgacgc gacagaccaa caaattgccg
    14101 cagaaaaagc taaagtagaa gaaaaatata atagcttaaa acaagcaatt gctggattaa
    14161 caccagactt ggcaccatta caaactgcaa aaacgcagtt gcaaaatgat attgatcagc
    14221 caacgagtac gactggtatg acaagcgcat ctgttgctac atttaatgaa aaactttcag
    14281 cagctagaac taaaattcaa gaaattaatc gcgtactggc atctcatcca gatgttgcaa
    14341 cgattcgtca aaacgtgaca gcagcgaatg ctgctaaatc agcacttgat caagcacgta
    14401 atggcttaac agtcgataaa gcgcctttag aaaatgcgaa aaatcaacta caacatagta
    14461 ttgatacgca aacaagtaca actggtatga cgcaagattc tattaatgca tacaatgcga
    14521 agttaacagc tgcacgtaat aagattcaac aaatcaatca agtattagct ggttcaccga
    14581 cagttgatca aattaataca aatacgtctg cagcaaacca agctaaatct gatttggatc
    14641 atgcgcgtca agcattaaca ccagataaaa caccgcttca aaatgcgaaa acgcaattag
    14701 aacaaagtat taatcaacca acagatacaa caggtatgac gaccgcttcg ttaaatgcgt
    14761 acaaccaaaa attacaagca gcgcgtcaaa agttaactga aattaatcaa gtgttgaatg
    14821 gcaacccaac tgtccaaaat atcaatgata aagtggcaga ggcaaaccaa gctaaggatc
    14881 aactaaatac agcacgtcaa ggtttaacat tagatagaca gccagcgtta acaacattac
    14941 atggtgcatc taacttaaac caagcacaac aaaataattt cacgcaacaa attaatgctg
    15001 ctcaaaatca tgctgcgctt gaaacaatta agtctaacat tacggcttta aatactgcga
    15061 tgacaaaatt aaaagaaagt gttgcggata ataattctat taaatcaggt caaaactaca
    15121 ctgacgcaac tcaagctaat aaacaagcgt atgataatgc agttaatgcg gctaaaggtg
    15181 tcattgggga aacgaataat ccaacgatgg atgttaatac agtgaaccaa aaagcagcat
    15241 ctgttaaatc gacgaaagat gctttagatg gtcaacaaaa cttacaacgt gcgaaaacag
    15301 aagcaacaaa tgcgattaca catgcaagtg atttaaacca agcacaaaag aatgcattaa
    15361 cacaacaagt gaatagtgcg caaaatgttc aagcagtaaa taatattaaa caaacaactc
    15421 aaagcttaaa cactgcaatg acaggtctaa aacgtggcgt tgctaatcat aaccaagtcg
    15481 tacaaagtga taattatgtc aacgcagata ctaataagaa aaatgattac aacaatgcat
    15541 acaaccatgc gaatgacatt attaatggta atccacaaca tccagttata acaccaagtg
    15601 atgttaacaa tgctttatca aatgtcacaa gtaaagaaca tgcattgaat ggtgaagcta
    15661 agttaaatac tgcgaaacaa gaagcgaaca ctgcattagg tcaattaaat aacttgaata
    15721 atgcacaacg tcaaaactta caatcgcaaa ttaatggtgc gcatcaaatc gagacagtta
    15781 atacgattaa gcaaaatgca actaacttaa atagtgcaat gggtaattta agacatgctg
    15841 ttgcagataa agagcaagtc aaacgtacag aagattatgc ggatgcagat acagctaaac
    15901 aaaatgcata taatagtgcc gtttcaagtg ctgaaacaat cattaatcaa tcaacaaatc
    15961 cgacaatgtc tgttgatgat gttaatcgtg caacttcagc tgttactact aataaaactg
    16021 cattaaatgg tgatgaaaaa ttagcacaat ctaaaacaga tgctgcaaga gcaattgatg
    16081 cattaccaca tttaaataat gcacaaaaag cagatgttaa atctaaaatt aatgctgcat
    16141 caaatattgc tggcgtaaat actgttaaac aacaaggtac agatttaaat acagcaatgg
    16201 gtaacttgca aggtgcgatc aatgatgaac aaacgacact taatagtcaa aattatcaag
    16261 atgcgacacc tagtaagaaa acagcataca caaatgcggt acaagctgcg aaagatattt
    16321 taaataaatc aaatggtcaa aataaaacga aagatcaagt tactgaagcg atgaatcaag
    16381 tgaattcggc taaaaataac ttagatggta cgcgtttatt agatcaagcg aagcaaacag
    16441 cgaaacagca gttaaataat atgacgcatt taacaactgc acaaaaaacg aatttaacaa
    16501 accaaattaa tagtggtact actgtcgctg gtgttcatac ggttcaatca aatgccaata
    16561 cattagatca agccatgaat acgttaagac aaagtattgc caacaaagat gcgactaaag
    16621 caagtgaaga ttacgtagat gctaataatg ataagcaaac agcatataac aacgcagtag
    16681 ccgctgctga aacgattatt aatgcaaata gtaatccaga aatgaatcca agtacgatta
    16741 cacaaaaagc agagcaagtg aatagttcta aaacggcact taacggtgat gaaaacttag
    16801 ctacggcaaa acaaaatgcg aaaacgtact taaacacatt aacgagtatt acagatgctc
    16861 aaaagaacaa tttgattagt caaattagta gtgcgacaag agtgagtggt gttgatactg
    16921 taaaacaaaa tgcgcaacat ctagaccaag ctatggctag cttacaaaat ggtattaata
    16981 acgaatctca agttaaatct tctgagaaat atcgtgatgc tgatacaaat aaacaacaag
    17041 agtatgataa tgctattact gcagcgaaag cgattttaaa taaatcgaca ggtccaaaca
    17101 ctgcgcaaaa tgcagttgaa gcagcattgc aacgtgtgaa tactgcgaaa gatgcattga
    17161 atggtgatgc aaaattaatt gcagctcaaa acgcagcaaa acaacatcta ggtactttaa
    17221 cacatatcac tacagcacaa cgtaatgatt taacaaatca aatttcacaa gctacaaact
    17281 tagctggtgt tgaatcagtt aaacaaagtg caaatagttt agatggcgca atgggtaact
    17341 tacaaactgc tatcaacgat aaatctggaa cattagcgag ccaaaacttc ttggatgctg
    17401 atgagcaaaa acgtaatgct tacaatcaag ctgtatcaaa tgccgaaaca attttaaata
    17461 aacaaactgg accgaataca gcgaaaactg cagttgaaca agcacttaat aatgttaata
    17521 gtgcgaaaca tgcattaaat ggtacgcaaa acttaaataa tgcgaaacaa gcagcgatta
    17581 cagcaatcaa tggcgcatct gatttaaatc aaaaacaaaa agatgtatta aaagcacaag
    17641 ctaatggtgc tcaacgcgtt tctaatgcac aagatgtaca gcgcaatgcg actgaactga
    17701 acacggcaat gggtacatta aaacatgcca tcgcagataa gacgaatacg ttagcgagca
    17761 gtaaatatgt taacgccgat agcactaaac aaaatgcata cacaactaaa gttaccaatg
    17821 ctgaacatat tattagcggt acgccaacgg ttgttacgac accttcagaa gtaacagctg
    17881 cagctaatca agtaaacagc gcgaaacaag aattaaatgg tgacgaaaga ttacgtgtag
    17941 caaaacaaaa cgccaatact gctattgatg cattaacgca attaaatact cctcaaaaag
    18001 ctaaattaaa agaacaagtg ggacaagcca atagattgga agacgtacaa actgttcaaa
    18061 caaatggaca atcattgaac aatgcaatga aaggcttaag agatagtatt gctaacgaaa
    18121 caacagtcaa agcaagtcaa aactatacag acgcaagtcc gaataaccaa tcaacatata
    18181 atagcgctgt gtcaaatgcg aaaggtatca ttaatcaaac taacaatcca actatggata
    18241 ctagtgcgat tacccaagct acaacacaag tgaataatgc taaaaatggt ttaaacggtg
    18301 ctgaaaactt aagaaatgca caaaacactg ctaagcaaaa cttaaatacg ttatcacact
    18361 taacaaataa ccaaaaatct gcaatctcat cacaaattga tcgtgcaggt catgtgagtg
    18421 aggtaacagc tgctaaaaat gcagcaactg agttaaacac gcaaatgggt aacttggaac
    18481 aagctatcca tgatcaaaac acagttaagc aaagtgttaa ctttactgat gcagataaag
    18541 ctaaacgtga tgcgtataca aatgcggtaa gcagagcaga aacaattctg aataaaacgc
    18601 aaggtgcaaa tacttcaaaa caagatgttg aagcagctat tcaaagtgtt actagtgcta
    18661 aaaatgcatt gaatggtgat caaaatgtca caaatgcgaa gaatacagct aaacatgcat
    18721 taaataactt aacgtctatt aataatgcac aaaaacgtaa cttaacaact aaaattgatc
    18781 aagcaacaac tgtagctggt gtagaagcgg tttctaatac aggtacgcaa ttgaatacag
    18841 cgatggctaa cttgcaaaat ggtattaatg ataaaacaaa tacactagcg agcgaaaact
    18901 atcatgatgc tgattcagat aagaaaactg cttatactca agccgttacg aacgcagaaa
    18961 atattttaaa taaaaatagt ggatcaaatt tagacaaagt tgccgttgaa aacgcgttgt
    19021 cacaagtaac aaatgcaaaa ggtgccctaa atggtaacca taatttagag caagctaaat
    19081 caaatgcaaa cactactata aacggacttc aacatttaac aactgcacaa aaagataaat
    19141 tgaaacaaca agtgcaacaa gcacaaaatg ttgcaggtgt agatactgtt aaatcaagtg
    19201 ccaacacatt aaatggtgct atgggtacgt taagaaatag cattcaagat aacacaggta
    19261 cgaaaaatgg ccaaaactat cttgatgcta cagaaagtaa caaaacaaac tataacaatg
    19321 ctgttgatcg tgctaatggt gtcattaatg caacaagcaa tccaaatatg gatgctaatg
    19381 caattaacca aatcgctaca caagtgacat caacgaaaaa tgcattagat ggtacacata
    19441 atttaacaca agcgaaacaa acagcaacaa atgccatcga tggtgctact aacttaaata
    19501 aagcgcaaaa agatgcgttg aaagcacaag ttaacaatgc acaacgtgta tctgatgcaa
    19561 ataacgttca acgtacagct actgaattga acagtgcgat gacagcactt aaagcagcta
    19621 ttgctgataa agaaagaaca aaagcaagcg gtaattatgt caatgctgat caagaaaaac
    19681 gtcaagcgta tgattcaaaa gtgactaacg ctgaaaatat tattagtggt acaccgaatg
    19741 cgacattaac agtcaatgac gtaaatagtg cggcatcaca agtcaatgcg gctaaaacag
    19801 cattaaatgg tgataacaac ttacgtgtag cgaaagagca tgccaacaat acaattgatg
    19861 gcttagcgca attgaataat gcacaaaaag caaaattaaa agaacaagtt caaagtgcaa
    19921 ctacattaga tggcgttcaa actgttaaaa atagttctca aacgttgaat acagcgatga
    19981 aaggcttaag agatagtatt gcgaatgaag caacaattaa agcaggtcaa aactacactg
    20041 acgcaagtcc aaataatcgt aacgagtacg acagtgcagt tactgcagca aaagcaatca
    20101 ttaatcaaac atcgaaccca acgatggaac caaatactat tacgcaagca acatcacaag
    20161 tgacaactaa agaacatgca ttaaatggtg cgcaaaactt agctcaagct aagacaactg
    20221 cgaaaaacaa cttaaataac ttaacatcaa ttaacaatgc acaaaaagat gcgttaacgc
    20281 gtagcattga tggtgcaaca acagtagctg gtgtaaatca agaaactgcc aaagcaacag
    20341 aattaaataa cgcaatgcac agtttacaaa atggtatcaa tgatgagaca caaacaaaac
    20401 aaactcagaa atacctagat gctgagccaa gtaagaaatc agcttatgat caagctgtaa
    20461 atgcagcgaa agcaatttta acaaaagcta gtggtcaaaa tgtagacaaa gcagcagttg
    20521 aacaagcatt acaaaatgtg aacagtacga agacggcgtt gaacggtgat gcgaaattaa
    20581 atgaagctaa agccgctgcg aaacaaacgt taggtacatt aacacacatt aataatgcac
    20641 aacgtacagc gttagataat gaaattacac aagcaacaaa tgttgaaggt gttaatacag
    20701 ttaaagccaa agcgcaacaa ttagatggtg ctatgggtca attagaaaca tcaatacgtg
    20761 ataaagacac gacgttacaa agtcaaaatt atcaagatgc tgatgatgcg aaacgaactg
    20821 catattctca agcagtaaat gcagcagcaa ctattttaaa taaaacagct ggcggtaata
    20881 cacctaaagc agatgttgaa agagcaatgc aagctgttac acaagcaaat actgcattaa
    20941 acggtattca aaacttagaa cgtgcgaaac aggctgctaa cacagcgatt acaaatgctt
    21001 cggacttaaa tacaaaacaa aaagaagcat taaaagcaca agtaacaagt gcaggacgag
    21061 tatctgcagc aaatggtgtt gaacatactg cgactgaatt aaatactgcg atgacagctt
    21121 taaaacgtgc cattgctgat aaagctgaga caaaagctag tggtaactat gtcaatgttg
    21181 atgcgaataa acgccaagca tatgatgaaa aagtgacagc tgcagaaaat atcgttagtg
    21241 gtacaccaac accaacgtta acaccatcag atgttacaaa tgcagcaaca caagtaacga
    21301 atgcgaagac gcagttaaac ggtaatcata atttagaagt agcgaaacaa aatgctaaca
    21361 cagcaattga tggtttaact tctttaaatg gtccgcaaaa agctaaactt aaagaacaag
    21421 tgggtcaagc gacgacgttg ccaaatgttc aaactgttcg tgataatgca caaacattaa
    21481 acactgcaat gaaaggtcta cgagaaagca ttgcgaatga agcaacgatt aaagcagatc
    21541 aaaactacac ggatgcaagt caaagtaaac aaactgacta caacaatgca gtcactgcag
    21601 caaaagcaat cattggtcaa acaactagtc caacaatgaa tgcgcaagaa atcaatcaag
    21661 cgaaagacca agtgacagct aaacaacaag cgttaaacgg tcaagaaaac ttaagaactg
    21721 cgcaaacaaa tgcgaagcaa catttgaatg gcttaagtga cttaactaat gctcaaaaag
    21781 aagcagccaa acgccaaatc gaaggtgcaa cgcatgttaa tgaagtaaca caagcgcaaa
    21841 ataatgcgga cgcattaaat acagctatga cgaacttgaa aaatggtatt caagatcaaa
    21901 atacgattaa gcgaggtgtt aacttcactg atgcagatga agcgaaacgt aatgcatata
    21961 caaatgcagt gacgcaagct gaacaaattt taaataaagc acaaggtcca aatactgcaa
    22021 aagacggtgt cgaaactgcg ttacaaaatg tacaacgtgc taaaaacgat ttgaacggta
    22081 atcaaaatgt tgcgaatgct aagacaactg cgaaaaatgc attaaataat ttaacatcaa
    22141 ttaataatgc acaaaaagaa gcattgaaat cacaaattga aggtgcgaca acagttgcag
    22201 gtgtaaatca agtgtctaca acggcatctg aattaaatac tgcaatgagc aacttacaac
    22261 gtggtatcaa cgatgaagca gctacaaaag cagctcaaaa atatactgat gcagatagag
    22321 aaaaacaaac agcatacaat gatgccgtaa cagcagctaa aacgttatta aataaaacag
    22381 ctggttcaaa tgataataaa gcagccgttg aacaagcatt acaacgtgtg aatactgcga
    22441 aaaatgcatt aaatggtgat gcgcgcttaa atgaagcgaa gaaaacagct aaacaacaat
    22501 tagcgacaat gtcacattta actgatgctc aaaaagcaaa cttaacatcg caaattgaac
    22561 gcggtacgac tgttgcaggt gttcaaggta ttcaagctaa tgctggtact ttaaatcaag
    22621 caatgaatca attaagacaa agtattgctt ctaaagatgc gactaaatca agtgaagatt
    22681 atcaagacgc gaatacagat ttacaaaatg catacaaccg tgcagtatca gatgctgaag
    22741 gtattattag tgcaacgaat aaccctgaaa tgaatccaga tacgattaat caaaaagcga
    22801 gccaagtgaa tagtgcgaag tcagcattga acggtgacga aaaattagca gccgcaaaac
    22861 aaactgcgaa aacagatatc ggtcgtttaa cagacttaaa caatgcccaa cgaactgcgg
    22921 caaatgcaga agtggatcaa gcaccaaacc ttgcagcggt aacagcagct aaaaataaag
    22981 cgacatcgtt aaatacagcg atgggtaatt tgaaacatgc acttgctgaa aaggataata
    23041 cgaagcgaag tgtcaattac acagatgcgg atcgaccaaa acaacaagcg tatgacactg
    23101 cagttacaca agccgaagca attactaatg ccaatggcag caacgcgaat gaaacacaag
    23161 ttcaagcagc gcttaaccaa ttgaatcaag ctaaaaatga cttgaatggt gataataaag
    23221 ttgctcaagc taaagaagca gcgaaacgtg cattagcttc atataataac ttgaataatg
    23281 cgcaatcaat tgcagcaact agtcaaattg acaatgcaac gacagtagca ggcgtaactg
    23341 ctgcacaaaa tactgctaat gaattaaata cagctatggg tcaacttcaa aatagtatta
    23401 atgaccaaaa cactgttaaa caacaagtga actttacaga tgctgaccaa ggtaagaaag
    23461 atgcttacac aaatgctgtt acgaatgctc aaggtatttt agataaagca cacggtcaaa
    23521 atatgacaaa agcacaagtt gaagctgcat taaatcaagt aacgactgct aagaatgctt
    23581 taaacggtga cgcaaatgta agacaagcaa aatcagatgc gaaagcaaac ttaggtacat
    23641 taacacactt aaataatgca caaaaacaag atttaacatc acaaatcgaa ggcgcaacaa
    23701 cagtcaacgg tgtaaatggt gttaaaacga aagcacaaga cttagatggt gcaatgcaac
    23761 gattagaatc agcaatcgca aataaagatc aaactagagc gagcgaaaac tacatcgacg
    23821 cagatccaac taagaaaaca gcatttgata atgccatcac acaagctgaa tcttacttaa
    23881 ataaagatca tggtgcgaat aaagataagc aagctgttga acaagcaatt caaagtgtaa
    23941 cgactgctaa gaatgcttta aacggtgacg cgaacttaca acgcgctaaa actgaagcta
    24001 cacaagctat cgataacttg acacatttga atacaccaca aaaaacagcg ttaaaacaac
    24061 aagtgaacgc tgcgcaacgt gtatcaggtg taactgatct gaaaaatagt gctacatcac
    24121 ttaataatgc gatggatcaa ttaaaacaag caattgctga tcatgacaca attgttgctg
    24181 gtggtaatta cactaatgca agtcctgata agcaaggtgc ttatactgat gcatataatg
    24241 ctgcgaaaaa cattgtaaat ggttcaccta atgtggttac aaatgcagca gatgttacag
    24301 cagcaacaca acgtgttaat aatgctgaaa caggtttaaa tggtgattca aacttagcaa
    24361 ctgcgaagca acaagctaaa gatgcattac gtcaaatgac gcatttatct gctgcacaaa
    24421 aacaaagtat tactggtcaa attgatagtg cgacacaagt aactggcgtt caaagtgtaa
    24481 aagacaatgc aacaaatctt gacaatgcaa tgaatcaact tcgaaatagt attgcgaata
    24541 aagatgaagt taaagcgagt cagccatatg ttgatgcaga tacagataaa caaaatgcat
    24601 acaacacagc tgttacaagt gctgaaaata tcattaatgc aacgagtcag ccgacacttg
    24661 atccatctgc agtaacacaa gcagctaatc aagtgaacac taacaaaact gcgcttaatg
    24721 gtgtacaaaa cttagcgaat aaaaagcaag aaacgactgc taacatcaac caattaagtc
    24781 atttaaataa tgctcaaaag caagatttaa atacgcaagt gacaaatgca ccaaatatta
    24841 gcacagtaaa tcaagtgaaa actaaagctg aacaattaga tcaagcaatg gaacgtttaa
    24901 tcaacggaat ccaagacaaa gatcaagtga aacaaagtgt taactttaca gatgcagatc
    24961 cagaaaaaca aacagcatac aacaatgcgg taacggctgc tgaaaatatt attaatcaag
    25021 caaatggtac aaatgcgaac caatcacaag ttgaagcagc actttcaact gtaacaacta
    25081 ctaaacaagc gttgaatggt aatagaaaag taacagatgc taaaaacaat gcaaaccaaa
    25141 cattatctac attagataac ttaaacaatg cacaaaaagg tgctgttact ggaaacatca
    25201 atcaagcgca cactgtagct gaagtaacgc aagccattca aacagctcag gaactgaata
    25261 cagcgatggg taacttgaaa aatagcttga atgataaaga cactacactt ggcagtcaaa
    25321 actttgcaga tgcagatcca gagaagaaaa atgcatacaa tgaagcggtt cataatgctg
    25381 aaaatatttt aaataaatct acaggtacaa acgtgcctaa agatcaagtt gaagcagcta
    25441 tgaatcaagt gaatactaca aaagcagcgc ttaatggtac tcaaaacctt gaaaaagcta
    25501 aacaacacgc aaatacagca attgacggtt taagccattt aacaaatgca caaaaagatg
    25561 cattaaaaca attggtacaa caatcgacta ctgttgcaga agcacaaggt aatgaacaaa
    25621 aagcaaacaa tgttgatgca gcaatggaca aattacgtca aagtattgca gataatgcga
    25681 caacaaaaca aaaccaaaat tatactgatg caagtccgaa taaaaaggat gcgtacaata
    25741 atgctgtcac aactgcacaa ggtattattg atcaaactac aagtccaact ttagatccga
    25801 ctgttatcaa tcaagctgct ggacaagtaa gcacaactaa aaatgcatta aatggtaatg
    25861 aaaacctaga ggcggcgaaa caacaagcga cacaatcatt aggttcatta gacaacttaa
    25921 ataatgcgca aaaacaaaca gttactgatc aaattaatgg cgcgcatact gttgatgaag
    25981 caaatcaaat taagcaaaat gcgcaaaact taaatacagc gatgggtaac ttgaaacaag
    26041 cgattgctga caaagatgct acgaaagcaa cagtaaactt cactgatgca gatcaagcaa
    26101 aacaacaagc atataacact gctgttacaa atgctgaaaa cattatttca aaagctaatg
    26161 gtggcaatgc aacacaaact gaagttgaac aagcaatcca acaagtaaat gcagcaaaac
    26221 aagcattaaa tggtaatgcc aacgttcaac atgcaaaaga cgaagcaaca gcattaatta
    26281 atagctctaa tgaccttaac caagcacaaa aagacgcatt aaaacaacaa gttcaaaatg
    26341 caactactgt agctggtgta aacaatgtta aacaaacagc acaagagtta aacaatgcga
    26401 tgacacaatt aaaacaaggc attgcagata aagaacaaac aaaagctgat ggtaactttg
    26461 tcaatgcaga tcctgacaag caaaatgcat ataatcaagc agtagcaaaa gctgaagcat
    26521 taattagtgg tacgcctgat gtagtcgtta cacctagcga aattactgca gctttaaata
    26581 aagttacgca agctaaaaat gatttgaatg gtaatacgaa cttagcaacg gcgaaacaaa
    26641 atgttcaaca agctattgat caattgccaa acttgaatca agcgcaacgt gatgaataca
    26701 acaaacaaat tacgcaagca actcttgtac caaacgtcaa tgctattcaa caagcggcga
    26761 caacgcttaa tgacgcgatg acacaattga aacaaggtat tgcgaataaa gcacaaatta
    26821 aaggtagcga gaactatcac gatgctgata ctgacaagca aacagcatat gataatgcag
    26881 taacaaaagc agaagaattg ttaaaacaaa caacaaatcc aacaatggat ccaaatacaa
    26941 ttcaacaagc attaactaaa gtgaatgaca caaatcaagc acttaacggt aatcaaaaat
    27001 tagctgatgc taaacaagca gctaagacaa atcttggcac attagatcat ttaaatgatg
    27061 ctcaaaaaca agcgttaaca acacaagttg aacaagcacc agatattgca acagttaata
    27121 atgttaagca aaatgctcaa aatctgaata atgctatgac taacttaaac aatgcattac
    27181 aagataaaac tgagacatta aatagcatta actttactga tgcagatcaa gctaagaaag
    27241 atgcttatac taatgcggta gcacatgcag aaggtatttt atctaaagca aatggcagca
    27301 atgcaagtca aactgaagtg gaacaagcga tacaacgtgt gaacgaagcg aaacaagcat
    27361 tgaatggtaa tgacaatgta caacgtgcaa aagatgcagc gaaacaagta attacaaatg
    27421 caaatgattt aaatcaagcg caaaaagatg cattaaaaca acaagtcgat gctgcgcaaa
    27481 ctgttgcaaa tgtaaacaca attaagcaaa cagcacaaga tttaaatcaa gcaatgacac
    27541 aattgaagca aggtattgca gataaagacc aaactaaagc aaatggtaac tttgtcaatg
    27601 cagatactga taagcaaaat gcatataaca atgcggtagc acatgctgaa caaatcatta
    27661 gtggtacacc aaatgcaaac gtggatccac aacaagtggc tcaagcgtta caacaagtga
    27721 ctcaagctaa gggtgattta aacggtaacc ataacttaca agttgctaaa gacaatgcga
    27781 atactgccat tgatcagtta ccaaacttaa atcaaccaca aaaaacagcg ttaaaagacc
    27841 aagtgtcaca tgcagaactt gttacaggtg ttaatgctat taagcaaaat gctgatgcat
    27901 taaataatgc aatgggtacg ttgaaacaac aaattcaagc aaacagtcaa gtaccgcaat
    27961 cagttgactt tacacaagcg gatcaagaca aacaacaagc atataacaat gcagctaacc
    28021 aagcgcaaca aattgcaaat ggaacaccaa cacctgtatt gtcgcctgat acagtaacac
    28081 aagcagttac aactatgaat caagcgaaag atgcattaaa cggtgatgaa aaattagcgc
    28141 aagcgaaaca ggatgcttta gcaaatctgg atacgttacg tgacttaaat caaccacaac
    28201 gtgatgcgtt acgtaatcaa atcaaccaag cacaagcgtt agctacagtc gaacaaacta
    28261 aacaaaatgc acaaaatgtg aatgcaacaa tgggtaactt gaaacaaggt attgcaaata
    28321 aagatactgt caaagcaagt gagaactatc atgatgctga tgccgataag caaacagcat
    28381 atacaaatgc agtgtctcaa gcggaaggta ttatcaatca aacgacaaat ccaacgctta
    28441 atccagatga aataacacgt gcattaactc aagtaactga tgctaaaaat ggcttaaacg
    28501 gtgaagctaa attagcaact gaaaagcaaa atgctaaaga tgccgtaagt ggaatgacgc
    28561 atttaaacga tgctcaaaaa caagcattaa aaggtcaaat cgatcaatcg cctgaaattg
    28621 ctacagtgaa ccaagttaaa caaacagcaa cgagcctaga tcatgcaatg gatcaattat
    28681 cacaagctat taatgataaa gctcaaacat tagcggacgg taattactta aatgcagatc
    28741 ctgacaaaca aaatgcgtat aaacaggcag tagcaaaagc tgaagcatta ttgaataaac
    28801 aaagtggtac taatgaagta caagcccaag ttgaaagtat cactaatgaa gtgaaaacag
    28861 cgaaacaagc attaaatggt aatgataatt tagcgaatgc taagcaacaa gcgaaacaac
    28921 aattggcgaa tttaacacac ttaaatgatg ctcaaaaaca atcatttgaa aatcaaataa
    28981 cacaagcgcc acttgttaca gatgtcacta caattaatca aaaagcgcaa acgttagatc
    29041 atgcgatgga attattaaga aatagtattg cagataacca agcgacatta gcatctgaag
    29101 attatcatga tgcaactgcg caaagacaaa atgactataa ccaagctgta acagctgcta
    29161 ataatatcat taatcaaaca acatcaccta cgatgaatcc agatgatgtt aatcgtgcaa
    29221 caactcaagt gaataacacg aaagttgcat tagatggtga tgaaaacctt gtagcagcta
    29281 agcaacaagc gaacaataga cttgatcaat tagatcattt aaataatgcg caaaagcaac
    29341 agttacaatc acaaattacg caatcatctg atattgcagc agttaatggt cacaagcaaa
    29401 ctgcagaatc tttaaatacc gcaatgggta acttaatcaa tgcgattgca gatcatcaag
    29461 ccgttgaaca acgtggtaac ttcatcaatg ctgatactga taaacaaact gcttatacta
    29521 cagcagtaaa tgaagcagaa gcaatgatta acaaacaaac tggtcaaaat gcgaaccaaa
    29581 cagaagtaga acaagctatt actaaagttc aaacaacact tcaagcgtta aatggagatc
    29641 ataatttaca agttgctaaa acaaatgcga cgcaagcaat tgatgcttta acaagcttaa
    29701 atgatcctca aaaaacagca ttaaaagacc aagttactgc tgcaacatta gtaactgcag
    29761 ttcatcaaat tgaacaaact gcgaatacgc ttaaccaagc aatgcatggc ttaagagaaa
    29821 gtattcaaga taacgcaaca actcaagcaa atagcaaata tatcaacgaa gatcaaccag
    29881 agcaacaaaa ctacgatcaa gcagtgcaag ctgcaaataa cattatcaat gagcaaacag
    29941 cgacattaga taataatgcg attaatcaag cagcaacaac tgtgaataca acgaaagcag
    30001 cattacatgg tgatgtgaag ttacaaaatg ataaagatcg tgcgaaacaa acggttagtc
    30061 aattagcaca tctaaacaat gctcaaaaac atatggaaga tacgttaatt gatagtgaaa
    30121 caactagaac agccgttaac catgatttga ctgaagcaca agcattagat caacttatgg
    30181 atacattaca acaaagtatt gctgacaaag atgcaacacg tgcgagcagt gcctatgtca
    30241 atgcagaacc gaataaaaaa caagcatatg atgaagcagt tcaaaatgct gagtctatca
    30301 ttgcaggatt aactaatcca actatcaata aaggcaatgt ttcaagtgcg acacaagcag
    30361 taacatcatc taaaaatgca ttagacggtg ttgaacgatt agcgcaagat aagcaaactg
    30421 ctggaaattc tctaaatcat ttagatcaat taacgccagc acaacaacaa gcgctagaaa
    30481 atcaaattaa taatgcaaca actcgtgata aagtggctga aatcattgca caagcgcaag
    30541 cattaaatga agcgatgaaa gcattaaaag aaagtattaa agatcaacca caaactgaag
    30601 caagtagtaa atttattaat gaagatcaag cacaaaaaga tgcttatacg caagctgtac
    30661 aacacgcgaa agatttgatt aacaaaacaa ctgatcctac attagctaaa tcaatcattg
    30721 atcaagcgac acaggcagta actgatgcta aaaacaactt acatggtgat caaaaattag
    30781 ctcaagataa gcaacgtgca acagaaacgt taaataactt gtctaacttg aatacaccac
    30841 aacgtcaagc acttgaaaat caaatcaata atgcagcaac tcgtga
//
LOCUS       DAKPJH010000021        30718 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.021, whole genome shotgun sequence.
ACCESSION   DAKPJH010000021 DAKPJH010000000
VERSION     DAKPJH010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30718
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.021"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(435..507)
                     /locus_tag="OY092_000801"
     tRNA            complement(435..507)
                     /locus_tag="OY092_000801"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(472..474),aa:Asp,seq:gtc)
     gene            complement(515..589)
                     /locus_tag="OY092_000802"
     tRNA            complement(515..589)
                     /locus_tag="OY092_000802"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(554..556),aa:Glu,seq:ttc)
     gene            complement(1018..2301)
                     /locus_tag="OY092_000803"
     CDS             complement(1018..2301)
                     /locus_tag="OY092_000803"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HCX1075768.1"
                     /translation="MSSIVVVGTQWGDEGKGKITDFLAEQSDVIARFSGGNNAGHTIQ
                     FGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGIPTSNLRISNRA
                     QVILPYHLVQDEYEERLRGDNKIGTTKKGIGPAYVDKVQRIGIRMADLLEKETFERLL
                     KSNIEYKQAYFKGMFNETCPSFDDIFEEYYAAGQRLKEFVTDTSKILDDAFVADEKVL
                     FEGAQGVMLDIDHGTYPFVTSSNPIAGNVTVGTGVGPTFVSKVIGVCKAYTSRVGDGP
                     FPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVL
                     TGLDTVKICTAYELDGKEITEYPANLDQLKRCKPIFEELPGWTEDVTSVRTLEELPEN
                     ARKYLERISELCNVQISIFSVGPDREQTNLLKELW"
     gene            complement(2579..3979)
                     /gene="dnaB"
                     /locus_tag="OY092_000804"
     CDS             complement(2579..3979)
                     /gene="dnaB"
                     /locus_tag="OY092_000804"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HCX1075769.1"
                     /translation="MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLLPESFY
                     RGAHQHIFRAMMHLNEDNKEIDVVTLMDQLSSEGTLNEAGGPQYLAELSTNVPTTRNV
                     QYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFK
                     DIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTA
                     FALNIAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSR
                     FTIAVGKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRAS
                     DNRQQEVSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDA
                     DIVAFLYRDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMK
                     QYNKFTDIDYAHADMM"
     gene            complement(4011..4457)
                     /gene="rplI"
                     /locus_tag="OY092_000805"
     CDS             complement(4011..4457)
                     /gene="rplI"
                     /locus_tag="OY092_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HCX1075770.1"
                     /translation="MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNL
                     KQLELQKKRAKQERQQEIEDAKALKETLSNIEVQVSAKTGEGGKLFGSVSTKQIAEAL
                     KAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ"
     gene            complement(4454..6421)
                     /gene="gdpP"
                     /locus_tag="OY092_000806"
     CDS             complement(4454..6421)
                     /gene="gdpP"
                     /locus_tag="OY092_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase GdpP"
                     /protein_id="HCX1075771.1"
                     /translation="MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLV
                     VMIIVSIVLFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQF
                     MTDHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITE
                     QVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFK
                     RYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLG
                     ELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAE
                     GDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKP
                     ELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFI
                     SNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR
                     TFDAASYLRAHGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYH
                     PVTVAQAADELLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGGGGHLTN
                     AATQLKGVTVEEAIAQLQQAITEQLSRSEDA"
     gene            complement(6436..7374)
                     /locus_tag="OY092_000807"
     CDS             complement(6436..7374)
                     /locus_tag="OY092_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YybS family protein"
                     /protein_id="HCX1075772.1"
                     /translation="MGVAYVFSKIQPKATIIATIALVFVALALYLVPGLGLIFALFAT
                     IPGIVLWNKSIQSFGISALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKERTSKE
                     RILYVTTVAMSLISLIAFMLLQTFGRIPPSASIVKPFKQTLHEAITMSGADANMTQIL
                     EEGFRQATVQLPGFIIIITFLIVLINLIVTFPILRKFKIATPVFKPLFAWQMSGILLW
                     IYIIVIICLLFTGQPSVFQSILLNFQLVLSLVMYIQGLSVIHFFGKAKGLPNAITILL
                     LIIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK"
     gene            complement(7669..8637)
                     /locus_tag="OY092_000808"
     CDS             complement(7669..8637)
                     /locus_tag="OY092_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HCX1075773.1"
                     /translation="MTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCH
                     ALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKK
                     LTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRT
                     SSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGN
                     KFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHVFKNLETKVLTMGFIDDLLYPDDQVR
                     ALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK"
     regulatory      complement(8698..8796)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(9001..9330)
                     /locus_tag="OY092_000809"
     CDS             complement(9001..9330)
                     /locus_tag="OY092_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HCX1075774.1"
                     /translation="MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSF
                     IPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIM
                     AALRFFF"
     gene            complement(9327..10022)
                     /locus_tag="OY092_000810"
     CDS             complement(9327..10022)
                     /locus_tag="OY092_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HCX1075775.1"
                     /translation="MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIIL
                     LCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRV
                     GLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQ
                     TLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIA
                     ATISAALGVMMER"
     gene            complement(10673..11959)
                     /gene="serS"
                     /locus_tag="OY092_000811"
     CDS             complement(10673..11959)
                     /gene="serS"
                     /locus_tag="OY092_000811"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HCX1075776.1"
                     /translation="MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISA
                     TEEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILC
                     RIPNLISDDVPQGESDEDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSG
                     ARFVYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDL
                     FKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLI
                     RLHQFDKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKT
                     YDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDKAAKPELAHTLNGSGLAVGRT
                     FAAIVENYQNEDGTVTIPEALVPFMGGKTQISKPVK"
     misc_binding    complement(12049..12265)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(12338..13852)
                     /gene="hutH"
                     /locus_tag="OY092_000812"
     CDS             complement(12338..13852)
                     /gene="hutH"
                     /locus_tag="OY092_000812"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HCX1075777.1"
                     /translation="MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVER
                     IIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMIL
                     RLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEG
                     KVLYRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQS
                     EWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSALTTRQAEIRVQD
                     AYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPI
                     AFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASL
                     VSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENARRVLAIECVIALQAA
                     ELKGVEGLSPKTRRKYEEFRSIVPSITHDRQFHKDIEAVAQYLKQSIYQTTACH"
     gene            14178..14990
                     /locus_tag="OY092_000813"
     CDS             14178..14990
                     /locus_tag="OY092_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HCX1075778.1"
                     /translation="METLNSINIPKRKENSHKGDYGKILLIGGSANLGGAIMLAARAC
                     VFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDF
                     KGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPI
                     EEQTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMIT
                     SFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES"
     gene            complement(15078..17747)
                     /gene="gyrA"
                     /locus_tag="OY092_000814"
     CDS             complement(15078..17747)
                     /gene="gyrA"
                     /locus_tag="OY092_000814"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001561428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HCX1075779.1"
                     /translation="MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKP
                     VHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDLSIYEAMVRMAQDFSYRYP
                     LVDGQGNFGSMDGDGAAAMRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVL
                     PARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDF
                     PTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEK
                     IAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVN
                     MIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHID
                     EIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLN
                     YISELEAILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDEDLIPEEQIV
                     ITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGR
                     VYKLKGYEVPELSRQSKGIPVVNAIELENDEVISTMIAVKDLESEDNFLVFATKRGVV
                     KRSALSNFSRINRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRP
                     LGRTATGVKGITLREGDEVVGLDVAHANSVDEVLVVTENGYGKRTPVNDYRLSNRGGK
                     GIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDVADISQNGRAAQGVRLIRL
                     GDDQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAVVNDETPGNAIHTEVID
                     SEENDEDGRIEVRQDFMDRVEEDIQQSSDEDEE"
     gene            complement(17784..19718)
                     /gene="gyrB"
                     /locus_tag="OY092_000815"
     CDS             complement(17784..19718)
                     /gene="gyrB"
                     /locus_tag="OY092_000815"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HCX1075780.1"
                     /translation="MVTALSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGL
                     HHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVI
                     LTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQF
                     DLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERD
                     EENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATN
                     LLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTAII
                     SIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA
                     RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSR
                     TQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTD
                     ADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLK
                     SELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD
                     VVENRRQFIEDNAVYANLDF"
     gene            complement(19728..20840)
                     /gene="recF"
                     /locus_tag="OY092_000816"
     CDS             complement(19728..20840)
                     /gene="recF"
                     /locus_tag="OY092_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HCX1075781.1"
                     /translation="MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIY
                     TLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQS
                     RLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQK
                     NNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDK
                     EALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNG
                     MDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTI
                     QHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK"
     gene            complement(20837..21082)
                     /gene="yaaA"
                     /locus_tag="OY092_000817"
     CDS             complement(20837..21082)
                     /gene="yaaA"
                     /locus_tag="OY092_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HCX1075782.1"
                     /translation="MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLIN
                     GVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ"
     gene            complement(21463..22596)
                     /gene="dnaN"
                     /locus_tag="OY092_000818"
     CDS             complement(21463..22596)
                     /gene="dnaN"
                     /locus_tag="OY092_000818"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HCX1075783.1"
                     /translation="MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVI
                     LTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQ
                     FQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETR
                     PVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDN
                     EEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAID
                     RASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGNLKISFNSKYM
                     MDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY"
     gene            complement(22874..24235)
                     /gene="dnaA"
                     /locus_tag="OY092_000819"
     CDS             complement(22874..24235)
                     /gene="dnaA"
                     /locus_tag="OY092_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HCX1075784.1"
                     /translation="MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLS
                     SIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPST
                     ETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGL
                     GKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLI
                     DDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIV
                     DITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLL
                     GKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPR
                     QIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEI
                     RNV"
     gene            24966..25103
                     /gene="rpmH"
                     /locus_tag="OY092_000820"
     CDS             24966..25103
                     /gene="rpmH"
                     /locus_tag="OY092_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HCX1075785.1"
                     /translation="MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLS
                     A"
     gene            25224..25577
                     /gene="rnpA"
                     /locus_tag="OY092_000821"
     CDS             25224..25577
                     /gene="rnpA"
                     /locus_tag="OY092_000821"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HCX1075786.1"
                     /translation="MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFR
                     LGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSL
                     EHVLKIAKVFNKKIK"
     gene            25716..27095
                     /gene="mnmE"
                     /locus_tag="OY092_000822"
     CDS             25716..27095
                     /gene="mnmE"
                     /locus_tag="OY092_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HCX1075787.1"
                     /translation="MDLDTITSISTPMGEGAIGIVRLSGPQAVEIADILYKGKHLLND
                     VPSHTINYGHIIDPESKEVVEEVMVSVLRAPKTFTREDIIEINCHGGILTINRVLELT
                     MTYGARMAEPGEFTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLI
                     KKQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLEQSKEIKQEINRLLDTGAQGKIM
                     REGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDT
                     AGIRETEDIVEKIGVERSRKALSQADLILFVLNNNEALTQEDYTLYEVVKNEDVIVIV
                     NKMDLEQNIDINEVKDMIGDTPLIQTSMLKQEGIDELEIQIRDLFFGGEVQNQDMTYV
                     SNSRHISLLKQARQTIQDAIDAAESGVPMDMVQIDLTRTWEILGEIIGETASDELIDQ
                     LFSQFCLGK"
     gene            27162..29039
                     /gene="mnmG"
                     /locus_tag="OY092_000823"
     CDS             27162..29039
                     /gene="mnmG"
                     /locus_tag="OY092_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HCX1075788.1"
                     /translation="MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMP
                     CNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLY
                     QQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE
                     IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPG
                     DDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPS
                     IEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMM
                     RAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKV
                     LNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGY
                     ELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAID
                     LLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKI
                     PEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVS
                     D"
     gene            29039..29758
                     /gene="rsmG"
                     /locus_tag="OY092_000824"
     CDS             29039..29758
                     /gene="rsmG"
                     /locus_tag="OY092_000824"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HCX1075789.1"
                     /translation="MTVEWLAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSI
                     TDEHDVYLKHFYDSVAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSL
                     NKRIQFLNHLASELQLQDVSFIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLP
                     LVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKR
                     QTPKKYPRKPGTPNKTPLLEK"
     gene            29801..30640
                     /gene="noc"
                     /locus_tag="OY092_000825"
     CDS             29801..30640
                     /gene="noc"
                     /locus_tag="OY092_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion protein"
                     /protein_id="HCX1075790.1"
                     /translation="MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQP
                     RQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVI
                     IRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
                     NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRV
                     RQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRI
                     YKR"
BASE COUNT         9770 a         5612 c         4933 g        10403 t
ORIGIN      
        1 ccaatataaa cttatatatt aatatttttt attagtttct cacggcggat tgtgacaatg
       61 atatttaaca caatgatgag gtctctattc caataataaa attagggtaa tggcaacttc
      121 tagttgcacg tcattgctca gaaaataaat atcattattc attattcgtt actttaacaa
      181 ttgatgttat ggaggattgg tggcatatca caacgaagaa atatgttgac agtagcatat
      241 gtttgtacgt ctaattaaga ttttattggc tacgtttatc tttcatatcc aaccactaag
      301 ttacttgagg ttcatacatt ataaagaaaa tggacgaaca gataaatcaa tatgattatc
      361 attcgtccat atatctttta ttaatataat attaaacgca aaaaaatgcc tatcctcttg
      421 gataggcatt tgtacggtct cgacgggaat cgaacccgcg atctcctgcg tgacaggcag
      481 gcgtgttaac cgctacacta cgagacctaa aaaatggtga ctcctacggg actcgaaccc
      541 gtgttaccgc cgtgaaaggg cggtgtctta accgcttgac caaggagccg ttcttaagca
      601 caagatagat tatagcacag ccaatcttgc catgacaaga tattttttac ataattttgc
      661 tattattttt tgaagaatgt tataagtgaa aaattgcatt ttattggctg tctatttatt
      721 ataataatta cgctattttt gaaatttttc tattttaggt gctttcattt acacttacgt
      781 ctactctatt ttaatagcta ttttcgacat cagacttatt acattcaagt atttcttctt
      841 aatttcgtta aatatcatct aatcttttaa attatgacta gcaaatatca cctttacgtt
      901 agtaattttt atctaaataa tcgaatcgat acagaagcaa acataacaaa agcctcctac
      961 cattaaagat agaaggctca tgtatttata atcattgtgt atgacttata taaagttcta
     1021 ccacaattct tttaataggt ttgtttgttc tctatctgga ccaactgaga agatagaaat
     1081 ttgtacatta cataattctg aaatacgctc taaatattta cgtgcatttt caggtaattc
     1141 ttctaaagta cgcacacttg ttacgtcttc tgtccaacct ggtaactctt caaagattgg
     1201 tttacaacgt tttaattgat ctaagtttgc tgggtactca gtaatttctt taccgtctaa
     1261 ttcataagct gtacagattt tcactgtgtc taggcctgtt aaaacatcga ttgagttaat
     1321 agataaatct gtaataccac ttacacgacg agagtgacgt aatacaactg aatcaaacca
     1381 acctacacga cgtggacgtc ctgttgttgt accgtattca cgaccaacct ctctaatatg
     1441 atgtccatct tcatcgaata attcagtagg gaatggacca tcaccaacac gtgatgtata
     1501 agctttacat acaccaatta ccttcgaaac gaatgtagga cctacacctg taccaacagt
     1561 aacgttacct gcaattggat tacttgatgt aacgaatgga tatgtaccat ggtcgatatc
     1621 taacattaca ccttgcgcac cttcgaaaag taccttttca tctgctacaa atgcatcgtc
     1681 taagattttt gatgtgtctg ttacaaattc ttttaaacgt tgacctgcag cataatattc
     1741 ttcaaagata tcatcaaatg atggacatgt ttcgttaaac atacctttga aatatgcttg
     1801 tttatattca atgtttgatt ttaataatct ttcgaatgtt tctttttcaa gtaaatctgc
     1861 catacgaata ccgatacgtt gaactttatc tacatatgct ggaccgatac cttttttagt
     1921 tgtaccaatc ttattatcac cacgtaaacg ttcttcatat tcatcttgta ctaagtgata
     1981 tggtagaatc acttgcgcac gattagatat acgtaaatta cttgtaggaa tgccacgttc
     2041 atttaatccg tctaattctt tcaatagtgc aactggatca acaacgactc cgttaccgat
     2101 taccgctaat ttgtctttgt aaaagatacc agatggtact aaatgtaatt tatatgtttc
     2161 tccgccaaat tgaatggtat ggcctgcatt attaccacct gaaaaacgcg cgataacatc
     2221 tgactgttct gccaagaaat ccgttatttt tccttttcct tcgtctcccc attgtgtccc
     2281 aactactacg attgatgaca tgtgagcacc tccaagtttt tctcatttaa ccatttgata
     2341 ttctaccaat atcgagacca taatgcaaat aaaaatcgaa cattgatttt cggccttttt
     2401 taaaagaaaa ccattttaac aaatcgtctt caacgtccta aaaacccttt aacagaggcg
     2461 ttgccagtac taattcatca ctttcaatac acaaacttaa catatatcaa cccgttcaga
     2521 acaaaataaa aaccgtacaa ttttatcatt aaaatgatta ttgtacggaa aaactttttt
     2581 acatcatatc agcatgtgca taatcgatat ctgtaaattt attatattgt ttcataaagt
     2641 gtaacttaac tgtgcctgtt ggaccattac gttgcttagc aatgatgatt tcaatttcac
     2701 cgttttcatc attcgtttgt ggctcaaaac caccatcatc gtcatcatct tcatcgccgc
     2761 cacggttata gtaatcatca cggtataaga atgcaacgat atcggcatct tgctcaatcg
     2821 aaccagattc acgaatatca ctcatcattg gacgtttatc ttgtcgttgt tcaacaccac
     2881 gagataactg actcaacgcg ataactggac attctaattc acgggctaat gcttttaatg
     2941 tacgagagat ttcagaaact tcctgttgtc tgttatcaga cgcacgtgaa ccactacctt
     3001 gaatcaactg taagtagtca atcacaatca tgtctaagcc atgttcttgc tttaatcgac
     3061 gacatttaga acgtagatca ttaattcgaa tacccggtgt atcatcaata aaaatcttcg
     3121 tacgtgataa tttacctacc gctatagtaa aacgactcca atcttcctca gtcatagtac
     3181 ccgttcttaa gcggtttgag tcaacattac cagaactaca aatcatacgt gtggctaact
     3241 gatcagcacc catctctagt gagaaaatac caactgtata catatcttca tgcgttgcaa
     3301 ctttttgtgc aatattaagt gcgaacgcag tcttacctac agatggacgc gctgcaagga
     3361 taattaaatc atttcggttg aaccctgctg tcatttggtc taaatctcga tatcctgtag
     3421 gaatacctgg tgtttgacca ctattttgat caagctcttc agctgtttca tatacttgtc
     3481 ctaagacgtc tcgaatgtct ttaaagccat cgctttcacg agaagatgat agctctaaaa
     3541 ttcgacgttc tgcatcactt aaaatcgcat ctagttcaag ttcatcatta tatccatcat
     3601 tggcaatact atctgcagtt tgaatcaatc tacgttttaa tgcatgctta gaaacaatgt
     3661 ccgtataata ctgaacattt cgtgtcgttg gtacatttgt agataactct gcaagatatt
     3721 gcggaccacc cgcttcattc aacgtacctt cacttgataa ctgatccatc aatgttacta
     3781 catcaatttc tttgttatct tcatttaagt gcatcattgc acggaaaata tgttgatggg
     3841 cacccctata aaacgactca ggaagcaaaa cttcctgagt agtattaatc aattctggat
     3901 ctataataat tgaacctaag acagactgtt cagcttcatt gttatgcggc atttgatttt
     3961 gctcatacat tctatccatg aatggttaca cctcttattt caatccaact ttattgttca
     4021 actgtgtgta cgcgaatcgt accttcaact tctttatcta atttaacagg tacattcgta
     4081 tatcctaggg aatgaattcc atttggtaaa tccattttac gtttatcaat tttaatatca
     4141 tgttgtgctt ttagtgcttc ggcaatttgt tttgtactta ctgacccaaa caatttacca
     4201 ccttcaccag tttttgctga tacttgaact tcaatgtttg ataacgtttc ttttaatgct
     4261 ttagcatctt caatttcttg ttggcgttct tgttttgcac gttttttctg taactctaat
     4321 tgtttaaggt tacctggtgt tgcttctaca gcataattct ttttcaataa gaagttattt
     4381 gcataaccta ctggtacttc tttaacttca ccttttttac ctttaccttt aacatcttgt
     4441 gtaaaaatta ctttcatgca tcttcactcc tacttaattg ttctgtaatt gcttgttgta
     4501 attgtgctat cgcctcttcg actgtcacac ctttaagttg tgttgccgca ttggttaaat
     4561 gtccaccgcc accaagtgct tccattgtta actggacatt tactgaaccg agtgaacgtg
     4621 cagatatacc aattagatta tcttcacgtc tcgcaacaac atatgatgct tcaatacctt
     4681 ctaaacttaa cagttcatct gctgcttgtg caactgttac tggatgataa attttatcgt
     4741 ctgaaccatg cgcaatggct atgccattat cttcgacttt tacagttcga attaattcag
     4801 atcgattaat ataagtatcc acatcatctt ttaagaaatg ttgcgttaga atcgtatctg
     4861 caccatgtgc acgtaaataa ctcgctgcat cgaatgttct tgatcctgtt cgtaatgtaa
     4921 agtttcttgt atctacaata atacctgcat acatcactgt tgattcaaga cgtgttaaac
     4981 gttgttctgt tggttgatat tccagtaatt ctgttacaag ttctgctgtt gaacttgcgt
     5041 atggttccat atatatcaac aatggattag agatgaagct ttcaccacgt ctatgatgat
     5101 cgataacaac tttacggttt gctttattta aaacattttc atctaaaacc agttccggtt
     5161 tatgcgtatc aacaatcact acggttgtct tagatgtcat catatcccaa gcatcatctg
     5221 atgttataaa tcgttctctt aactctggct ttttatcaat ttcgttcatc acgcgtcgta
     5281 atgttggatc aatgtcagtc tcatttaata cgatgtatgc ttctaaatta ttcatcattg
     5341 caaatctaga cacaccgatt gctgcaccaa ttgcatctaa gtcaggacgt ttatgtccca
     5401 tgataatgac tttgtcaccc tctgcaagga tatcttttaa cgcatgtgag atcacacgtg
     5461 ctcttacacg agtacgtttc tccatcgggt cagtcttacc gccatagaaa cgcacattac
     5521 cattaatact tttaattgca acttggtcgc caccgcgtcc taatgctaag tctaggcctg
     5581 attgtgataa ttcacctaag tcgattaaat tttcagtacc ttcaccaaca ccaatactta
     5641 atgttaattg ggcacgataa ccaacacttt tttcacgtaa ttgactcaag atatcaaatt
     5701 tagattcttc taagtcagct aatatttttt gatttaaata ggctacgaat tgatcagaac
     5761 tatacctttt aaagaatata ttatactcag ttgcccatcg actaataaca cgcgttacca
     5821 ttgaattgat ttccgaacgc tgcgtatcat tcatattttg agtaatctca tcgtagttat
     5881 ctaaaaataa tgtcgcaatg attggtttag aattttcata tagttcattt gtttgtactt
     5941 gttcagttat atcaaagaaa tagaggcagt gatcattctc agaataacgt acttggaaat
     6001 gatactgatt atattctatt tcaacggatt tcactctatc taattgcttt aaaatgtttg
     6061 gaaatacttc atttacagat tcagaaatga catttgcttc catatgatct gtcataaatt
     6121 ggttaaccca ttcgatgtga tcattttcat ctaaaacaat gataccaatt ggtaaatgtt
     6181 tgattgcttt attatttgtt gttgaaattt gagcactcaa accatctaca taactatcca
     6241 ttttcattaa agcttgtctg aataaaacga tgctaacaat aatcatcacg acaagaacga
     6301 tagatgcaat tagtgctata agactattaa agataaacca tacacccatt aaaacaattg
     6361 ctgtgatgat catgatgaca aatggtatta gtaaagcttt cttagtggac tgccgattca
     6421 ttattccacc tctattcact ttttagaatt atttttcatg attcgcttca aattcaaact
     6481 taaatcgata acaccaagta gtcctacaat atgtgtcgta ggtgtcagta ttgtaccgat
     6541 aatcaatagt aaaatcgtta ttgcattcgg caaacctttc gctttaccaa agaaatgaat
     6601 aacacttaaa ccttgaatat acattactaa tgataacaca agttggaagt ttaaaagaat
     6661 gctctggaac acactcggtt gacctgtaaa taataaacat atgataacaa taatgtatat
     6721 ccataataaa ataccgctca tttgccacgc gaaaagtggc ttaaatacag gtgtagcgat
     6781 tttaaatttt cgtaaaatcg gaaatgtaac gattaagtta attaagacga ttaaaaatgt
     6841 aatgataatg atgaaacctg gtaattgaac ggtcgcttgt ctaaaccctt cttctaatat
     6901 ttgggtcata ttcgcatcgg caccgctcat cgtaatcgct tcatgtaatg tttgcttgaa
     6961 aggttttact atgctcgctg atggtggaat tcttccgaat gtttgtagta acataaaagc
     7021 gattaatgaa attaagctca tcgctactgt tgttacgtat aatattcttt ctttagacgt
     7081 tctttctttg agcaattgac caataattaa acttgcaatt aagactaata tgatggcact
     7141 taaaacgaaa gtattaccta aaacagttgt tataattact gtaataagtg cactaatccc
     7201 gaaagattgt attgatttat tccataaaac gatacctggt atggttgcaa ataatgcaaa
     7261 tattagtcct aaaccaggca ctagatataa agctaaagcg acaaatacca acgcaatcgt
     7321 tgcaattatt gttgctttag gttgtatttt tgaaaacaca taagccactc ccatattttt
     7381 aactatagct attattttaa cctctttaat ggaatttaac aatttataga ttgtatgctt
     7441 ctatttcatt taattgaata ataactttca tgttttataa gtaattaaca tactcatttg
     7501 aatcgctttt gtgtgctttc attttcaaca tgattattta atcccactac atagcaatca
     7561 agcttgattt agatttacaa ttcatttcca ctctcatgta ctctagatgt ctttgaatat
     7621 gataactgtg atttagtggc ttcatttttt gaaaatatat acatattatt acttacgctt
     7681 aaaatgcttt aaatttaaga aatgatataa gttaggtgcc caggtactaa aatttagtag
     7741 gaatccatca tgcccaacat tatcaggcac gaagaaatga cgatgatatt taaaacgttc
     7801 acctaatgca cgaacttgat catccggata tagcaaatca tctatgaacc ccatcgttaa
     7861 cacttttgtt tctaaatttt taaaaacatg cgttacgtct gtgcgacctc ggtcaatgtt
     7921 gtgactatcc aatacatcta gcagtgtcag ataacaattc aaatcaaaat gttctttaaa
     7981 tttattacct tgatgttgtt ggtatgcgac tacttcatcc ggcgtgaaac gttcatcata
     8041 actttttgat gatcgatatg tcaaaaaacc taattggcgt gcaatactta gaccttcctt
     8101 accaccaaga tgaatggctt gccttgcaat ttcattgaaa gctctactat aagatgatgt
     8161 tcgacttgtt gcagcaagga taatggcttt atctacttca aactgttgat tgtaaagtag
     8221 ttccattgct tgcatacctc caagacttcc ccctattaaa atattaatct tatcataacc
     8281 aagggcttgt atacctcgtt cattcgctct gactatatct cttaatgtta attttttagg
     8341 aaaatgaggg tcgtttaaag gtgaacttga accgaaagga ctaccaataa catcaaatgt
     8401 taaaaattga taatcgtgaa tgggtatata tcccccatca ataatttctc gccaccaacc
     8461 cggataatca tctgttccat atgttaaatg attgccagtt aatgcatgac aaactacaac
     8521 taatggttgt ccatgataac cgacatgctc atatctcaaa cgcaagttat ctatgacttc
     8581 cccagattct gtaataaatt tccctaaatt taaagtatct actgtgtaat ttgtcattgt
     8641 tctttcctcc ttaaacaaaa aaaacttctc accctattga aaagtaagaa gtctttatac
     8701 ttatcattcg agtaactcgt tggttttagc accgtgctat aaagtcggtt gctgaagtat
     8761 cacagggcca agtccctcaa cttctcacaa taagaaatat gaaattgtta tgtgttagtt
     8821 gagattcagt gatgaattac ttttatcatt taaaatgttg ttatcattgt catgcgttag
     8881 ccaaatcgct tacgtataca cgattcccaa tcttaacata gacgatttgt atatcagaat
     8941 tttctgatta ctaacagttt acctaagttt aaatatctgt tcaatgattt tcagttattt
     9001 ttaaaagaaa aatcgtaatg ctgccatgat aacaatccca ctaataattg taatagttaa
     9061 actacgcgtg attatagata aaataaccgt cggaatgagc gcgataatgt aagggatgtt
     9121 taatgtatac ccctcaccat gaggcgtctg ttgaataatg ctgtctatga caagtgccgt
     9181 aaatagtgtg attgggataa atgatagcca tcgaaccacg acatcaggca attgcacttt
     9241 tgaaatcatg ataaaaggta taattcgaat taatagcgtt acgataccac acaataaaat
     9301 aagtattaac atgttcatat gagttatcat cgttccatca tcactcctaa cgctgctgaa
     9361 attgtggctg caattaatat tgctagatat gaaggcataa acatacttag cgataacatc
     9421 attactatga cggcaataat gagtactatg taaattctta atcgcgattt agtaattgat
     9481 tcaaattgcg caatggccaa aaagataaac atagccgtga tagcaaaatc taaccctagc
     9541 gtttgcggat ttgagatata ttcgccaaat aaagccccag ctacacatga aattgcccaa
     9601 aataaatatg ctgtgatatt aagaccatgc atccaacgat cattgatagc ttctcctttt
     9661 aaataaggtg taatggcgac gccaaacgtt tcgtcagtta ctaatgaacc taatccaaca
     9721 cggttccaaa acccatatgt cttgaagttt ggtgcaagcg acatacttaa aaggaacatt
     9781 cttgaattta cgataaatac agttagtaca atcgctgata tcggtgtacc tgctataaac
     9841 aacgcgcaca taataaattg cgcagcaccg gcatatataa caagacataa caagataatt
     9901 tctaaaatac taaagttttg agacgaagcc acaataccaa atgaaatacc aacaccggca
     9961 taacccaata atgttgggat acactcttgt acgccttgtc taaaacttaa atgtgttgcc
    10021 atctcaatta cctcctttgc cactttatat ttatataatt acgaaaaaat aatataccta
    10081 gtctaataca gttctatacc ctaagcaata acattagact ccagtttgtc tgaggttaga
    10141 catactggag tcttcaatca gctttatatc aactttttat ttttgagaat tttcattttt
    10201 ttatttaaga ctacctccat attttctacg gatttgtagt tgtttttaag tactaatttt
    10261 ataatttttt atatctaatg atgagtctgg gatattgatt catgtaacac tcccttataa
    10321 tcatcatcct ctccccctac cctactccat cgatattact catactacat caacgaaatc
    10381 agttttttat cacttaattt cctataatag tgatgctcaa aattgttacg ttttagattg
    10441 ttttagttca tcataattat cccgtattgt tgctataatg aaatgcgttc accccattaa
    10501 accacaaact taatttattg ttgttatgtg cattggctca ctattatact tttacagcac
    10561 aaaaaaagtg gcgacagctt cgtcaccact ttttaaaata ttatttaaag tatcttgccc
    10621 ttgctttaag tatacgtaga tatatacttt ttaaagcttg tagctaaagc ctttatttaa
    10681 ctggttttga aatttgtgtt ttaccaccca taaatggtac taatgcttct ggaattgtta
    10741 ctgttccatc ttcattttgg taattttcaa caatagcagc aaatgtacgt ccaactgcta
    10801 aaccactacc atttaatgta tgtgctaatt ctggtttagc tgctttgtca cgcttgaagc
    10861 ggatgttagc acgacgcgct tggaaatccg tacagtttga gcatgaacta atttctttat
    10921 aatcattgta gcttggtaac caaacttcta aatcatatgt tttgcttgca ctaaatccaa
    10981 tatcacctgt acataaaata acacgacggt atggtaaacc taactcttct agaattgctt
    11041 ctgcgtttgt tgtcatttct tctaaagcat tccatgaatc ttcaggttgt tcaaaacgta
    11101 ccatttccac tttatcgaat tgatgtaaac gaattaatcc tcttgtatct ctacctgctg
    11161 atcctgcttc actacggaaa catgcagatt gaccagtgaa tttttcagga agtacacctg
    11221 gttgaataat ttcattacgg tagaaattcg ttaatggtac ttcagcagtt ggaattgtat
    11281 ataatccttc tttttctact ttaaataaat cttcttcaaa tttaggtaat tgacctgtac
    11341 catacattgt atctgcgttc acaagctgtg gtaccatcat ttctgtataa ccatgttgtg
    11401 ttgtatgttt tgtaatcata tagttcatta aagcacgctc taattgcgca ccttcatttg
    11461 ttaaatatac aaaacgcgca cctgaaactt ttgctgcacg atcaaaatca gccattttca
    11521 attcttctac aatatcccaa tgtgctttgg gttcaaatga aaactcacgt ggtgtacccc
    11581 actttttaac ttcaacgtta tcttcatcag attcaccttg aggtacatca tcacttatta
    11641 aatttggaat acgacaaagg atacctgtca ttttattatc aatttcattt aattgactat
    11701 ctttttcttt aatatcgtca cctaatgtgc gcatttcagc aatcacatca tcagcatttt
    11761 ctttattacg tttttttaat gcgatttctt cgcttacttt attacgacgt gctttcattt
    11821 cttctgttgc actaattaat ttacgtcgtt gctcatccaa ttctaaaatt tcatctacaa
    11881 cttttggatc atctccacgt aattcaattt tgctcttaac tgtgtcaggc tcatttctga
    11941 ataatctaat gtctaacatt aaccttcatc ctttcccaaa taattatcat ttattatgga
    12001 atgacgtacg tctttatttt ttagaaaata aaaaaagacc acatccctac aagggacgtg
    12061 gtctacgcgt tgccacccta tttaacaatt taagttataa agatacacta aacctaaatt
    12121 gcacttcact aaaataacgg ttatcaccga ttgttctttt aaattaagta ggtagattca
    12181 tatatatgtt gattcttgtt cacactaacc acaagctctc tgatatcgaa cactatatat
    12241 tacttgtcct acgaacaatg tcttattaag ttatttttaa tatagcaaac tatatttgct
    12301 ttttcaagta acgatttcaa acatcactca tgtcgattta gtgacatgca gtcgtttgat
    12361 aaattgattg ctttaaatac tgtgcaaccg cttcaatatc tttatgaaat tgacggtcat
    12421 gtgtaatgga tggcacgata cttcgaaact cctcatattt acgacgtgtt tttggtgata
    12481 aaccttcaac accttttaac tctgctgctt gtaatgcaat aacacattcg attgccagca
    12541 cacgtcttgc attttcaata atttgataac catgtctagc agctgtagtt cccatagata
    12601 cgtgatcttc ttggttcgca gatgaagtga tagaatcaac actcgctgga tgcgctaaag
    12661 ttttattttc agaaacgaga cttgcagcag catattgcat aatcatcgcg ccactttgca
    12721 atcctggctc tggactaaga aatgctggta aatcaccatt taattgagga tttactagtc
    12781 gctctagacg acgttccgat acgtttgcta attcacttac acctaattta agatgatcta
    12841 atgcaaaagc aataggttgt ccatggaagt taccacctga aataacaaac gtttcatttg
    12901 cttcctcaaa tataagtgga ttatcattag ccgcattcat ttcaaattct aattgctgtt
    12961 taacataatt gaatacttga aaactcgcgc catggatttg tggtatacaa cgcaacgtat
    13021 atgcatcttg tacacgtatt tctgcttgtc gcgttgttaa tgctgatcct tctaaccaat
    13081 cacgcatacg cgctgccaca ttaatctgtt cttgaaaatt acgaacagcg tgcacatcat
    13141 gtcgatatgc atctataatg ccattaagag actgatgcgt taatgcagca atccattcag
    13201 attggtaacc taaatcttct gcttctatat aactaatgac accttgagct gtcatagctt
    13261 gcgtaccatt aatcaatgct aaaccttctt tagcctgaag gttcaaaggt tgtctattta
    13321 attctcttaa tacatcgtca ctatcctttt cttcccctct gtacaatact ttcccttcac
    13381 caattaatgc taatgctaag tgtgataatg gcgctaaatc tcctgatgca ccgagagagc
    13441 cttgctgtgg gattatcggt ataatacgtt catttataaa aaattgtaat tgtctcacta
    13501 attctaaagt ggcacctgaa tgacctttta ataatgtatt caatcgtaaa atcatcatga
    13561 ctaatgctac ttcttttgaa aatggctcac ctagtccaca ggcatgtgag cgtatcagat
    13621 tcacttgtaa ttcattatat tgcgtcgggt ctatacgtac atcactaaat aacccaaaac
    13681 ctgtagtaat accgtaaacc gtttcctcat tttcaataat acgttcaact accgctctac
    13741 tttttttgac acgttctaac gcatcatcaa taatttcaat ctttgattgt tgttgtaaaa
    13801 atgatttaat atcctcaatt gttagtgtct caccatctaa atataaagtc atatatgtta
    13861 cccccttgtt tatattaagt aacccatcct tcttgaagta tacgttttca tttttattga
    13921 aacaatggtt ttacgtacat ttataaccta ttatcagagc actattgtag tgcgttaaag
    13981 gatattaaga ttgttgtaag catatttaat aatttatcta ttgacgaatt gcatatacag
    14041 gtatagtatt ttctattgta tttaacgaca aataataatg aattcagaaa tttataatac
    14101 attttgttaa aagttactat atatttttaa aattgaataa attcggaaaa ggcttttaca
    14161 tgggaggtta tatcactatg gaaacgttaa attctattaa cattcctaag cgtaaagaaa
    14221 attcacataa aggtgattat ggcaaaattt tattaattgg tggatctgct aacttaggtg
    14281 gtgccattat gttagcggct cgtgcatgtg tatttagcgg tagtggttta atcactgtag
    14341 ctacacatcc aacaaatcat tcagcattac attctcgttg cccagaagcg atggttattg
    14401 atattaatga tacgaaaatg ttgacgaaaa tgattgaaat gactgacagt atactaattg
    14461 gtccaggtct tggcgttgat ttcaaaggaa ataatgccat tacattccta ctacaaaata
    14521 tacaaccgca tcaaaattta atcgtagacg gcgatgcgat tacaatcttt agtaaactga
    14581 aaccgcaatt acctacatgt cgcgtgattt ttactccgca tctcaaagaa tgggagcgat
    14641 taagtggtat tcctattgag gaacagacat atgagcgtaa tcgtgaagca gttgatcgtt
    14701 taggcgcaac tgttgtactt aaaaaacatg gtactgaaat tttctttaaa gatgaagact
    14761 ttaaattgac aatcggtagt ccagcaatgg cgactggtgg tatgggcgat acacttgctg
    14821 gtatgattac aagttttgtc ggtcaatttg ataacttaaa agaagcggtt atgagtgcca
    14881 catatacaca tagttttatt ggcgaaaacc ttgcaaaaga tatgtatgtg gtaccaccat
    14941 caagacttat caatgaaata ccttacgcaa tgaaacaatt agaaagttag tcattactaa
    15001 tcattgaata tagtaaagca ttactttcta gcacaaaaat aagacttccc tacatatagg
    15061 gaagtcttat ttttttatta ttcttcatct tcatctgatg attgttgtat atcttcttca
    15121 acacgatcca tgaaatcttg tcttacttca atacgtccat cttcatcatt ttcttctgaa
    15181 tcaatcactt cagtatgaat tgcatttcct ggtgtttcat catttacaac cgcttcacgt
    15241 tgttgttcag taccatcttc agatacagtt gaagtagatt gctcatcttc attcgtttca
    15301 tcttctgcat cttcttttac tttagcaacc gttgaaacaa attgatcatc acctaagcga
    15361 attaagcgaa caccttgtgc tgcacgacca ttttgagaaa tatctgcaac atctagtcga
    15421 ataatgacac ctgcattagt aacaatcatt aaatcttctt caccagttac tgtagtgata
    15481 catacaacat taccattacg ctcagtaatc gtagctgttt taataccttt accaccacga
    15541 tttgataaac gatagtcatt aactggcgta cgtttaccat aaccattttc agtaactact
    15601 aatacttcat caacactgtt tgcatgagct acatcaagcc ctacaacttc gtcaccttca
    15661 cgaagtgtaa tacctttcac acccgttgct gtacggccta aaggacgtaa tgttgattca
    15721 gggaatcgaa ttaatgatgc atgtgatgta ccaatcaaga tatcttcttg accacttgtt
    15781 aagcgaactg caattaactc atcatcttct ctgaacgaaa tcgcaatctt accatttcta
    15841 tttattcttg agaagttact taatgctgaa cgtttaacga caccacgttt agttgcaaac
    15901 actaagaagt tgtcttcact ttcaaggtct ttaacagcaa tcattgtact aatgacttca
    15961 tcattttcaa gttcaatagc attcactaca ggaatacctt tagactgtct tgataactca
    16021 ggcacttcat aacctttaag tttgtataca cgacctttgt tagtaaagaa caatacatgg
    16081 tcatgtgtac ttaaagttac caattgactg acaaaatctt cttccaatgt gttcatacct
    16141 tgaacaccac gaccaccacg gttttgagca cgatatgtag ataccggcaa acgtttaatg
    16201 tagttattat ggctcaaagt aattactatt tgttcttctg gaattaagtc ttcatcttct
    16261 aagtcttcaa atccacctaa ttgaatttct gtacgacgat catcaccgaa acgatctcta
    16321 atttcagtca attcatctct aactaactgt aataacactt cttcatcagc taagattgct
    16381 tctaattcac taatataatt taataactca ttatattcag cttcaatttt gtctctctct
    16441 aaacctgtta gacgtcttaa acgcatgtct aaaatagctt gagcttgttt ttcagaaagt
    16501 ttgaagcgtt gttgcaagct ttccattgca actttatctg tatctgactc acgaatcgtt
    16561 gaaataattt catcgatatg gtcaagtgcg atacgtaatc cttctaaaat gtgggcacga
    16621 tctttagctt tacgtaagtt gtattgcgta cgtcttctaa caactgtctt ttgatgctct
    16681 aaataatgta ccaacgcttc ttttaaatta ataagcttcg gtctaccatt tacaagtgca
    16741 atcatattca caccaaatga tgtttgaaga ggtgtttgtt tgtataagtt atttaaaatg
    16801 acactagcat ttgcatcctt acgcacatca ataacgacac gcacaccagt acgtaaactt
    16861 gtttcatcac gtaaatcagt gataccgtca attttcttgt cacgaacgag ctctgcaatt
    16921 ttttcaatca tacgagcctt attcacttgg aaaggaattt cagtgacaac aatacgttga
    16981 cgtccgcctc cacgttcttc aataactgca cgagaacgca tttgaattga accacgacct
    17041 gtttcatatg cacgtctaat accactctta cctaaaataa gtccagcagt tgggaaatca
    17101 ggaccttcaa tatcctccat taactcagca attgaaatat cagggttttt acttaagcta
    17161 agtacaccat tgattaattc tgttaagtta tgtggtggaa tattcgttgc catacctacc
    17221 gcgatacctg atgcaccatt ggctaacaag ttagggaatc gagcaggtaa gactgacggc
    17281 tctctttcat taccatcata gttatcgata aaatctattg tatctttatt aatatctcgt
    17341 aacagttcaa gtgtgatttt agtcatacgt gcttcagtat aacgcattgc tgctgcgcca
    17401 tctccatcca ttgaaccaaa gttaccttgg ccatcaacaa gcggataacg ataactgaaa
    17461 tcttgagcca tacgtaccat tgcttcataa atagataagt caccatgagg gtgatattta
    17521 cccattacgt caccaacgat acgtgctgat tttttatatg atttatccgg tgtcatacct
    17581 tgttcattta atccatatag tatacgacga tgtactggtt ttaaaccgtc acgaacatct
    17641 ggcaatgcac gagcaacgat aacactcatc gcataatcta aaaatgattc acgcatttca
    17701 ctggtaatat ttcgttcatt tattcttgat tgaggtaatt cagccatcaa gagttcctcc
    17761 ttcaaaagtt cagttcacag cgcttagaag tctaagtttg cataaactgc attatcttct
    17821 ataaattgtc tacggttttc tacaacatca cccattaaca tttcaaatgt ttggtccgct
    17881 tcaatcgcat cttcaagttt tacttgtaaa agagcgcggt gctcagggtt cattgttgtt
    17941 tcccataatt gatctgcatt catttctcca agacctttgt atcgtgcaat agaccatttt
    18001 ggtgttggat tcaattcaga tttaagttta tcaagttccc tatcattgta tacataatac
    18061 ttttgtttac cttgtgtcag tttatacaac ggtggctgtg caatatacac atagcctgct
    18121 tcaattaacg gtctcataaa tcgatagaag aatgttaata acaatgttct aatatgcgct
    18181 ccatccacat cggcatcagt cataatgacg attttgtgat atcttgcttt cgctagatca
    18241 aagtcgccac cgattcctgt accaaatgct gtaatcattt gacgaatttc attgttattc
    18301 aaaattctat ctaatcgtgc tttttcaaca tttaatatct tacctcgtaa tggtaaaatc
    18361 gcctgtgttc tagagtcacg accagatttt gtagaccccc cggcagagtc cccttcgact
    18421 aagaaaatct cacattcttc aggactttta ctagagcaat cggctaattt acctggaaga
    18481 cttgctacat ctaacgctga tttacgacgt gtaacttcac gcgctttttt cgcagcaaca
    18541 cgtgcacgtg ccgccataat acctttttca accactgtac gtgcgacttg tggattttca
    18601 tataaaaatc gttcaaagtg ctctgagaat aatttatcta caacttgacg cacttcagaa
    18661 ttacctaatt ttgtcttcgt ttgaccttcg aattgaggat caccatgttt gatagatata
    18721 attgctgtca tgccttcacg tgtatcttca ccagaaagtc tatctttttc ttctttcata
    18781 atcttgctac ttaaaccata actatttaag acacgcgtta atgcacgttt gaatccgtct
    18841 tcatgcgtac caccttcgta cgtatgaatg ttatttgcgt aagttaaaag atttgtggca
    18901 tatcctgagt tatattgaat cgcaatttct acttcaatat catctttaga ttgatgaata
    18961 taaattggct catcatgaat aggttcttta ttttcgttca ataactcaac ataagattta
    19021 ataccgccct cataatgata ggagtcttct ctaacgtttt cttcatcacg ttcatctctt
    19081 aatgtgattt gaattccttt gtttaagaaa gcaagctctc taatacgttg ctgtaatgtt
    19141 tcatagttgt agacagttgt ctctgtgaag atttctccat ctgctttaaa acgaatgaca
    19201 gtacctgtct tatcagttgt gccaacttct tttaagtcaa attgaggtac acctttttta
    19261 tatgcttgat gatatatagt ctcatttctg tgtacatata cttctaagtc ttgtgacaat
    19321 gcgtttacaa ctgatgaacc aacaccatgt aaaccaccag atactttgta tccgccaccg
    19381 ccgaatttac caccagcatg taaaacagtt aaaataactt cgacagctgg acgtcccatt
    19441 ttttcttgaa tatcaactgg gataccacgt ccgttatccg ttactttaat ccagttatct
    19501 ttttcaataa caacttcaat ttgatttgca taaccagcta atgcttcatc gatactatta
    19561 tcgacaattt cccacactaa atggtgcaaa cctctctctg aagtcgatcc tatatacata
    19621 cctggtcttt tacgtactgc ttctaaacct tctaatactt gtatttgccc agcaccataa
    19681 ttatccgtgt tgtttacatc tgacaatgca gtcaccatcg ctttctgtta ctttataatt
    19741 tcaccttgat taatacgata caatttagcg ttattcatga tttcatgatc aataccatct
    19801 acagatgtcg tagtgacaaa tgtttgtact ttatgctgaa tcgtacttaa taaatgcgtt
    19861 tgacgcgaat catctaattc actgagtaca tcgtctaata ataagatggg atattcccca
    19921 acttcgatat tcattaactc aatttcagct aatttaatgg acaaagccgt tgtacgttgc
    19981 tgtccttgag aaccatatgt ttgagcatcc atgccattca catcaaaact tatatcatct
    20041 cgatgtggtc cgaataagct aatgcctcgt tctttttctc tttgcatatt atcgctaaga
    20101 atagacataa tttcttcaag tcgtgccgct tcattttgag cataatcaaa tttaagacta
    20161 ggtaaataat ttagcgacaa cgcttcttta tcatttgtga taccagcatg aatcggttta
    20221 gctaacgact ctagctcttg aataaaatgt gcacgtttat cagttacttt cattgcatat
    20281 tcagcaaact gctgatttaa tacttccaac attgttaagt cctttttttg gcctaattgt
    20341 aactgcttta agtaattatt cttttgcttt aaaatacgtt ggtattgagc taaatcattt
    20401 aagtaaacag cagaaatttg gcccaactcc atatctataa agcgtcgtct tatttgagga
    20461 gagcctttta caatattcaa atcttctggc gcaaatagaa ccacattgag gtgtccaata
    20521 tattgagtta gtcgactttg ctctaagtga ttcactttga cttgtttacc ttttttagtt
    20581 ataaacattg ttaatggcat cgtgccgtgt ctataactaa gctcaccttc tattttagca
    20641 taatcagcat taaaacgtat gagttcctta tcattactcg ttctatgact ttttgctaaa
    20701 gctaaggtat aaattgattc aagtaaattt gtctttcctt gtgcattttc tccaatgagg
    20761 atattcacgt caggatgaca tttcaacgta acctcatcat agttacgata attttctaat
    20821 tggagtgtat ttaacttcat tgttcacctt gatgaatgat taagaaagaa ccagcatctt
    20881 caggtaattc tgggatatct atacgatctt gatgttctaa ctttttaccg cgacgtgttt
    20941 cacgcactcc attaattaat acttcaacgt cttgcaagaa ccattttgct tgaccaccag
    21001 attcaataat cccttctgtt tttagaaatt gacctaaatt aatgtctcct tctactacaa
    21061 cttcttgaac caaaataatc actccatttc tttgtatgtc attaatatat tatacctttt
    21121 tttgtcacaa atttcattta aaatagaggt agaaaccgtt tacatataaa taattaattc
    21181 ttatttttgg gcaatactgt cattttcaat tttttaacgc tatttaacgg cgtttaactt
    21241 ttatattcaa cttgttattg actattaaaa ttttaaattt aaagggcata taagcacact
    21301 tattaaattt tggatacatt tgtcataaat ttaattggcg tcttttattt gctgtttaaa
    21361 atgctgtcaa atttatttta catacgcatc tagaattatt tttgccaaaa aataaaggat
    21421 gacgttttaa ttaatcacgt catcctttat ttatatttat ttttagtaag ttctgattgg
    21481 taaaattaat tgcgttactg agtcgtcacc ttttggtttt agaataaatg gtttcattgt
    21541 accgaagaat tcaacttcaa cctcatcatt atcgattgct tttaaagcat ccatcatata
    21601 tttagagttg aatgaaattt tcaggttacc accttcaaca tcgtttgcat cgacttcttc
    21661 ttttacagta ccaatttctg gtgatgtaga agacaattca acaacgtcat cacctgtact
    21721 taatttaata acgttattac caccttcacg tgctaataaa gatgcacgat caatcgcatg
    21781 ataaaactcc ccattgtcta tacttaattt aatttcatag ttttcaggga ataaacgtgt
    21841 tgtatcagga taatgtcctt ctaataatcg agaaataaag ttcacatttc caactttaaa
    21901 taaaacttgg tttgaagcaa agaagatatc aatgtcttct tcattgtcag acataatttt
    21961 atttaattca gctaaagcct tacctggaat gatgacattt ttgttttcag aaacatcttc
    22021 taactgcaac tttcttacag ccaagcggtg cgagtcagtc gctgtgcata ttaattcatt
    22081 ttcttgtata agccagttca caccagttag tactgggcgt gtttctgagg tggacactgc
    22141 aaaattcgtt tgtgcaatta cgtttttaag cacttttacc gacaattgaa ttgcgtcatc
    22201 tctagaaact tgaggtaata aaggatattg atctggatct aagccactca aattaaattc
    22261 agaatgacct gatgtaatta atgtctggaa ttgttcattt gtagataatt taacatcttt
    22321 accaggtaat ttttttataa tatcaacaaa gaatcgtcca ggaagtacta ctgagcctgt
    22381 ttctgaaata ttgacaatat cttcgccatc tacagtttta ggaatagtga tttctattga
    22441 aatttcagag tctgaaccag ttagtataac ttcatgttct ttcgcatcga ttttgatacc
    22501 agttaatata ggtaatgttg ttcttggtga aatagctttt aatgtgtcat ttaattgtgt
    22561 aataaaataa tctcttttaa tagtgaattc catcattaat taaaactcct tccagtcgtt
    22621 tatatataat tatataggtt ttaagttctt agtaatagta gtaggtgctg tggattggtg
    22681 gataagtctt aaaaacatag atttggcgaa gttatacaca tgttgataac ttgtgtatga
    22741 tgtgtatgac ttttaaacat tatccacaaa atgagttttg ctcatcttgc cacattagta
    22801 tatagaaatg taaaaaatga cagttattat tagtgctgtt atataacaga ttacatttcc
    22861 caaagtttcc tacttataca tttcttattt ctttttcaag attctctact tcttgtttaa
    22921 aaataggatc ttcttttaaa tctttagata ttttttcatg agcatgaatg acggtcgtat
    22981 gatcacgccc accaaattct tcaccaattt taggtaatga gaaatctgta agctctctag
    23041 acaagtacat agctatttga cgcggatatg caattgactt tgtacgtttt tttgcactga
    23101 aatcttcaat tctaacatta tagtactggc ctacaatttt ttgaatatct tggatggtaa
    23161 tctttttaga ttttggtgct tgaatgatat cttttaaagc ttcagcagtt aattcagttg
    23221 taattggttt tcctaataat tgtgaatatg caagtaaacg tgttaatgca ccttctaatt
    23281 cacgaatatt agattgaatt tgatttgcta tataatttaa agcttctggt ggaatatcta
    23341 atttttcttc ttcaattttc ttctgcaaaa ttgccattcg agtttcataa tctggtggcg
    23401 taatatcaac aattagcccc cattcaaagc gtgaacgtaa tcgatcttct aattgtgcaa
    23461 tttcctttgg tggtcgatca ctcgaaataa ctatttgctt gttattctga tgcaattcat
    23521 taaaagtata gaaaaattct tcttgtgttt gtactttatt ttgtatgaac tgaatatcat
    23581 cgattaataa gacgtcgata ttacgatatc tttctctgaa agcttcacct tcgttatcac
    23641 gtattgattt aataaattca tttgtgaatt tttcacttga tgtgtaaatc actttggcat
    23701 ctggattatt atctaaaaca tgatgaccaa tggcatgcat taaatgggtt tttcctaaac
    23761 caacacctcc atagataaat aatggattgt acgctttggc tggtgcttcg gccacagcta
    23821 aactcgctgc atgtggaaag cggttaccag gtcctattac aaaagtgtca aatgtgttat
    23881 gggcattgaa ttgctctcta ccaagcacat gattatcctc agttgtttca gtagaaggtt
    23941 ttgttgtttc ttttggagta gcagtttcat tattactata atttgctaat tcttcagtag
    24001 taataaagtg aggttttact tcatagccta caacatcaaa taagattgct tggataattt
    24061 cagcatattg ttgatttaac caatttgcat taaaaggaat actcgataat acgatagctt
    24121 caccatcttt gatcgtgtaa agttcagtat cttttaggaa agttgagtaa cttacagctg
    24181 ataatttttc ttgagcaatt tcaagcactt tttcccaaat ttctttttcc gacataaatt
    24241 tactccatct ttcttaaatt tttaagttat acacaaaaat aacagccgtg gataacttct
    24301 aaacacacca tgttaataat tatccacaag ttaataacaa tcagtggata actttatcct
    24361 gcttattagt tatgcacagt atttttatgt aaatatcaat aaataaatcc ttataaaatc
    24421 atgagttgga cgacttatcc acacaattat actttttcag ttctctatat gtcaaatacc
    24481 tgtgaatatg ttgctaaaaa tagtataact ttgtgtgtaa tttctaatta tccacaattc
    24541 tgaaaactgt aaatgtgcat aagtggataa cttttccttc tatagagtat ctgttagtga
    24601 gtgtatcaaa acagcttggg aaataattta taaagtatgt ataagaactg tataaggtat
    24661 tcaaacattg taaacactca tgcttcggac caaactcatg gtgatgttat gaaatttgat
    24721 tgctcgcatc gtgtatttct atctttaatc gataaaagta aaaaaattga gcagtagcat
    24781 aaaatgaact tgcgttataa aaaggatttt gttatattgt agtagttgct tgaattatga
    24841 ctagataatc aatgagctaa tacgagaatt ttaatctaag aaacgcaaaa tcttatctat
    24901 taaagtgatc agagtctgca taatctggta tattagataa ctgtataaag atggaggtgt
    24961 tttgcatggt aaaacgtact tatcaaccaa ataaacgtaa acatagtaaa gttcatggtt
    25021 tcagaaaacg catgagcaca aaaaatggcc gtaaagtttt agcgcgccgt cgtcgtaaag
    25081 gccgtaaagt tttatctgca taagatcact gactcatcag tgatcttttt tttcgtttaa
    25141 attaagaata aatagaaatt tatgttataa gctcaataga agtttaaata tagcttcaaa
    25201 taaaaacgat aaataagcga gtgatgttat tggaaaaagc ttaccgaatt aaaaagaatg
    25261 cagattttca gagaatatat aaaaaaggtc attctgtagc caacagacaa tttgttgtat
    25321 acacttgtaa taataaagaa atagaccatt ttcgcttagg tattagtgtt tctaaaaaac
    25381 taggtaatgc agtgttaaga aacaagatta aaagagcaat acgtgaaaat ttcaaagtac
    25441 ataagtcgca tatattggcc aaagatatta ttgtaatagc aagacagcca gctaaagata
    25501 tgacgacttt acaaatacag aatagtcttg agcacgtact taaaattgcc aaagttttta
    25561 ataaaaaaat taagtaatga tagggtaggg gaaggtaaac attaaccact caacacctcc
    25621 cgaagtctta cctcagacaa acgtaagact taccttaggg ttataataac ttactttaaa
    25681 atgtattcac atcgttgaag gaggcgagta gcaatatgga tttagataca attacgagta
    25741 tttcaacacc aatgggtgaa ggggcaattg gaattgttcg attgtctgga ccgcaagccg
    25801 ttgaaattgc agacatatta tataaaggaa aacatctttt aaatgatgtt ccatcacata
    25861 cgattaatta cggtcatatt attgatccag agtctaaaga agtggttgaa gaagttatgg
    25921 tgtctgtgtt aagagcgcca aaaacattta cacgcgaaga tattatagaa attaattgtc
    25981 atggtggtat attaacgatt aatagagtgc tggaacttac tatgacatat ggcgctcgaa
    26041 tggctgagcc aggtgaattt acaaaacgag cctttttaaa tggtcgtatt gatttatctc
    26101 aagctgaagc agttatggac tttattcgct cgaagacaga tagagcttct aaggttgcga
    26161 tgaatcaaat tgaaggtcgt ctaagtgact taatcaaaaa acaacgtcaa tctatattag
    26221 agatactcgc tcaagtagaa gtgaatattg attatcctga atacgatgat gttgaagatg
    26281 cgactactga atttctttta gagcagtcta aagaaatcaa acaggaaatt aatcgtttat
    26341 tagataccgg tgcgcagggt aaaattatgc gtgaaggttt atctacagtt attgttggta
    26401 aaccaaacgt aggtaaatca tcgatgttaa ataatttaat acaagataat aaagcgattg
    26461 taactgaggt agcaggtact acaagagatg tcttagaaga gtacgtcaat gttcgtggcg
    26521 tgccattaag attagttgat actgctggta tacgcgagac agaagatata gtagagaaga
    26581 ttggtgttga acgctctaga aaggctctta gccaagcaga cttaatttta tttgtattaa
    26641 acaataacga agcattgact caagaagatt acacattata tgaagtggtt aaaaatgaag
    26701 atgtaatcgt aattgttaat aaaatggatt tagagcaaaa catagatatt aatgaagtta
    26761 aagatatgat aggtgatacg ccattaattc aaacttcaat gttaaaacaa gaaggtattg
    26821 atgaattaga aatacaaatt cgagatttgt tctttggtgg agaagtacaa aatcaggata
    26881 tgacttatgt ttctaattca agacatattt cattattaaa acaagcaaga caaacgatac
    26941 aagatgcgat tgatgcagca gaatctggtg tgcctatgga tatggtacaa attgatttaa
    27001 ctagaacttg ggaaatatta ggagaaatta ttggtgagac tgcaagtgat gaactcatcg
    27061 atcagttatt cagtcaattc tgcttaggta aatagtaatt gaaatagacg gaataccgtc
    27121 ttaagaaggc tagtaagata tcaaataagg aggtttatat tgtggttcaa gaatatgatg
    27181 taatcgttat aggtgcggga catgcaggtg tagaagcagg tttagcatct gcaagacgtg
    27241 gtgctaaaac attaatgcta acaataaatt tagataatat tgcatttatg ccatgtaacc
    27301 catctgtagg tggaccagct aaaggtatcg ttgttcgtga aattgatgct ttaggtggac
    27361 aaatggcaaa aacaatcgat aaaacacaca ttcaaatgag aatgttaaat acaggtaaag
    27421 gacctgctgt aagagcacta agagcgcaag cagataaagt actttatcaa caagaaatga
    27481 aacgcgtgat tgaagatgaa gaaaatttgc atataatgca aggtatggta gacgaactta
    27541 ttatagaaga taatgaagtt aaaggtgtac gtacaaatat tggtacagag tatttatcta
    27601 aagcagtaat tattacaacg ggaacatttt tacgtggtga aatcatttta ggtaatatga
    27661 agtattcaag tggaccaaat caccaattac catcaatcac attatcagac aatttaagag
    27721 aacttggttt tgatattgtt cgttttaaaa caggtacacc accgcgtgta aattcaaaaa
    27781 caattgacta ttcgaagact gaaatacaac caggtgacga tgtaggtcgt gcattcagct
    27841 ttgaaacaac agaatatata ttagatcaat tgccatgttg gctaacgtat actaatgctg
    27901 aaacacacaa agttatcgat gataatttac atctatctgc aatgtattca gggatgatta
    27961 aaggaaccgg gccacgttat tgcccttcaa ttgaagataa atttgttcga tttaatgata
    28021 agccgcgaca tcaacttttc ttagagcctg aaggtcgtaa tacaaatgaa gtatatgtgc
    28081 aaggattatc tacaagtctt cctgaacatg tgcaacgtca aatgttagag acgataccag
    28141 gtcttgaaaa agcagatatg atgcgtgccg gctacgcaat tgaatatgat gcgattgtgc
    28201 caacgcagtt atggcctaca cttgaaacga aaatgattaa aaacttatac actgcaggtc
    28261 aaattaatgg tacatctggt tatgaagaag cagcaggaca aggattgatg gcaggtatta
    28321 acgctgcagg taaagtgtta aacacaggcg aaaagatatt aagtcgttca gatgcatata
    28381 ttggtgtctt aatcgatgat cttgtaacta aaggtactaa tgaaccttat cgtttactaa
    28441 catcacgtgc agaatatcgt ttgttactac gtcatgataa tgctgatttg agattgacgg
    28501 atatgggata tgaacttggt atgatttctg aagaacgata tgcacgtttt aatgaaaaac
    28561 gtcagcaaat tgatgcggaa attaagcgtt tatcagatat tcgtattaaa ccaaacgaac
    28621 atacgcaagc gattattgaa caacatggtg gttctcgctt aaaagatggt attttagcta
    28681 tcgatttatt acgcagacct gaaatgactt acgatataat tttagaaatt ttagaagaag
    28741 aacatcaatt gaatgcagat gttgaagaac aagtagaaat acaaacaaaa tatgaaggtt
    28801 atatcaataa atcactacaa caagttgaga aagttaagcg tatggaagag aagaaaattc
    28861 cagaagactt agattatagt aagattgata gtttggcgac tgaagcgcga gaaaaattat
    28921 cagaagtaaa acctttaaat attgcacaag cttctagaat atcaggggta aatccagcag
    28981 acatatctat attattgatt tacttagaac aaggtaaact ccaaagggtg agtgactaat
    29041 gactgtagaa tggttagcag aacaattaaa agaacataat attgaattaa ctgagactca
    29101 aaaacaacag tttcaaacat attatcgttt acttgttgaa tggaatgaaa agatgaattt
    29161 gacaagtatt acagatgaac acgatgtata tttgaaacat ttttatgatt ccgttgcacc
    29221 tagtttttat tttgatttta atcagcctat aagtatatgt gatgtaggcg ctggagctgg
    29281 ttttccaagt attccgttaa aaataatgtt tccgcagtta aaagtgacga ttgttgattc
    29341 attaaataag cgtattcaat ttttaaacca tttagcgtca gaattacaat tacaggatgt
    29401 cagctttata cacgatagag cagaaacatt tggtaagggt gtctacaggg agtcttatga
    29461 tgttgttact gcaagagcag tagctagatt atccgtgtta agtgaattgt gcttaccgct
    29521 agttaaaaaa ggtggacagt ttgttgcatt aaaatcttca aaaggtgaag aagaattaga
    29581 agaagcaaaa tttgcaatta gtgtgttagg tggtaatgtt acagaaacac atacctttga
    29641 attgccagaa gatgctggag agcgccagat gttcattatt gataaaaaaa gacagacgcc
    29701 gaaaaagtat ccaagaaaac cagggacgcc taataagact cctttacttg aaaaataatg
    29761 cataatcctt tacaactaac ataaaaggag cgaatggata atgaaaaaac ctttttcaaa
    29821 attatttggt ttgaaaaaca aagatgacat cattggacat attgaagaag atcgcaatag
    29881 taatgttgaa tccattcaaa ttgaacgtat cgttcccaac cgttatcaac caagacaggt
    29941 gtttgaacca aataaaatta aagaacttgc tgaatcaata catgaacatg gtttactaca
    30001 acctattgtt gtaagaccga ttgaagaaga tatgtttgaa attattgctg gagagcgccg
    30061 atttagagca atacaatcac taaatttacc tcaagcagac gttattattc gtgatatgga
    30121 tgatgaagag acggctgttg ttgcattaat tgagaatatt caaagagaaa atttgtctgt
    30181 tgttgaagaa gcggaagcct ataagaaatt attggaaatt ggtgatacaa cgcaaagtga
    30241 attggcaaaa agtttaggta aaagtcaaag ctttattgca aataagttgc gtttattgaa
    30301 gttggcgccg aaagtactac ttcgcttaag agaaggtaaa attactgaac gccatgcgag
    30361 agcggtatta tcattgtctg atagcgaaca agaagcgttg attgagcaag tcattgcaca
    30421 aaagctaaat gtgaaacaga ctgaagatag agtacgccaa aaaacggggc ccgaaaaagt
    30481 caaagcacaa aaccttcgct ttgcacaaga tgtcactcaa gcacgagatg aggtaggcaa
    30541 aagtatccaa gcgattcaac aaacaggact acatgttgag cataaagaca aagatcatga
    30601 agattattat gaaataaaaa ttcgaatata taaacgttag tagtaggatg tcgtatacat
    30661 gatgactaac acataaaaga caaagctaag atcataacag ctttgtcttt tttttctt
//
LOCUS       DAKPJH010000022        30295 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.022, whole genome shotgun sequence.
ACCESSION   DAKPJH010000022 DAKPJH010000000
VERSION     DAKPJH010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30295
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.022"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            68..637
                     /locus_tag="OY092_000826"
     CDS             68..637
                     /locus_tag="OY092_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HCX1075791.1"
                     /translation="MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFK
                     VQKIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIW
                     LNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
                     KNPDQPIDYNKATLNVFEALTRYSLFEDK"
     gene            779..853
                     /locus_tag="OY092_000827"
     tRNA            779..853
                     /locus_tag="OY092_000827"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:811..813,aa:Asn,seq:gtt)
     gene            856..944
                     /locus_tag="OY092_000828"
     tRNA            856..944
                     /locus_tag="OY092_000828"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:891..893,aa:Ser,seq:gct)
     gene            complement(1126..2637)
                     /locus_tag="OY092_000829"
     CDS             complement(1126..2637)
                     /locus_tag="OY092_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HCX1075792.1"
                     /translation="MEKNENINVEILTTSDMHSHFLNGDYGSNIYRAGTYVNQVRAQN
                     HRVILLDSGGSLAGSLAAYYYAIVAPYKRHPMIKLMNRMHYDASGVSPSEFKFGLSFL
                     TRSIALARFPWLSANIEYNVTKEPYFSTPYCIKHFGDLKIAIVGVTADGLMENEYSEM
                     EQDVSIEKTLVASKRWIRYIHEVEEPDFLIVIYHGGLNKISNSTKNKKASSNEAEKLM
                     EELGVIDLMITAHQHQTIVGQDHETYYVQAGQDAKELVHLSINFKKRTTTYDVESIDS
                     KVIDLNEYEEDQELLDLTFYDRKAVAYWSQEIISDKGLMLSVNGLQDLVCQTHPFSQL
                     LHDAIHLAFDNDITCVHVPMNGEKGLSGQIRNEDLYHAYPYPDKPMDMTISGQNIKDI
                     LEYSYSHLDFVNEQLSLTIIDETLCTMWQGFNYEIGMNQEPGQRVMLDQIDLTKSYRV
                     TMTDYCYRNYKNYLKNAIIHESYDETMSTLIAEKLRDPNYRISCSDNFVVKNR"
     gene            complement(2776..4134)
                     /locus_tag="OY092_000830"
     CDS             complement(2776..4134)
                     /locus_tag="OY092_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HCX1075793.1"
                     /translation="MSIFSQFLKRSSPQQGIVLYYIVAIVIAFLLLNLPYVHKPGVEV
                     NPIDTLFVAVSGISVTGLSPISIVDTYSTFGQLIILVILNIGGIGVMAIGTMLWVVLG
                     KHIGIRERQLIMLDNNKNTMSGTVKLIIDIVKSIFVIELVGAMLLAFYFYRDNPDLKY
                     AIMQGVFVSISATTNGGLDITGKSLIPYAHDYFVQAIVIFLIILGSIGFPVLLEVKAY
                     IQNRVTNFRFSLFTKITTSTYLFLFIVGVLAILLFEHNHAFKGLSWHQSLFYSLFQSA
                     TTRSAGLQTIDVTTLSDPTNIIMGILMFIGSSPSSVGGGIRTTTFAILILFLINFSNN
                     ADKTSIKVYNREVHIMDIQRSFAVFTMATILTFLGMLIISATENGKLTFLQVFFEVMS
                     AFGTCGLSLGVTSDISDISKVVLMVLMFIGRVGLISFIIMIAGRREPDKFHYPKERIQ
                     IG"
     gene            complement(4151..6475)
                     /locus_tag="OY092_000831"
     CDS             complement(4151..6475)
                     /locus_tag="OY092_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HCX1075794.1"
                     /translation="MEWTLVDIGKKHVIPKSQYRRKRREFFHNEDREENLKQHQDKQN
                     IDHTTSKKADKQIHKDSIDKHERFKNSLSSHLEQRNRDVNENKTEESKSNQDSKSAYS
                     RDHYLTDDVFKKQNSLDSVDQDTEKSKYYEQNSDATLSTKSTDKIESTDMRKLSSDKN
                     KVGHEEQHVLSKPSEHDKETRIDFESSRTDSDSSMQTEEIKKDSSDENKSSNLKSEVI
                     SDKSNTVPKLSESDDEVNNQKPLTLPEEQKLKRQQSQNEQTKTYTYGDSEQNDKSNHE
                     NDLSHHTPSISDDKDNVMRENHIVDDNPDNDINTPSLSKTDDDRKLDEKIHVEDKHKQ
                     NADSSETVGYQSQSSASHRSTEKRNISINDHDKLNGQKTNTKTSANNNQKKATSNLNK
                     GRATNNNYSDILKKFWMMYWPKLVILMGIIILIVILNAIFNNVNKNDRMNDNNDTDAQ
                     KYTTTMKNANNTVKSVVTVENETSKDSSLPKDKASQDEVGSGVVYKKSGDTLYIVTNA
                     HVVGDKENQKITFSNNKSVVGKVLGKDKWSDLAVVKATSSDSSVKEIAIGDSNNLVLG
                     EPILVVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNS
                     GGAVVNREGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKGLETKGKIDYPDVGVKM
                     KNIASLNSFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDDL
                     RFRQIIFSHKDDLKSITAKIYRDGKEKEINIKLK"
     gene            complement(6694..7497)
                     /locus_tag="OY092_000832"
     CDS             complement(6694..7497)
                     /locus_tag="OY092_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCX1075795.1"
                     /translation="MLMDPSLILPYLWVLVVLVFLEGLLAADNAIVMAVMVKHLPPEQ
                     RKKALFYGLLGAFVFRFLALFLISIIANFWFIQAAGAVYLIYMSIKNLWQFFKHPEIE
                     SPEAGDDHHYDESGEEIKASNKSFWGTVLKIEFADIAFAIDSMLAALAIAVTLPKVGI
                     HFGGMDLGQFVVMFLGGMIGVILMRYAATWFVELLNKYPGLEGAAFAIVGWVGVKLVV
                     MVLAHPDIAVLPEHFPHGVLWQSIFWTVLIGLVIIGWLGSVVKNKKSHK"
     gene            complement(7799..9361)
                     /locus_tag="OY092_000833"
     CDS             complement(7799..9361)
                     /locus_tag="OY092_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HCX1075796.1"
                     /translation="MNLKQEVESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVK
                     GKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMA
                     VDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLDEIEETLN
                     IETYPMNWPIGMGQSFFGIIDRKSKTIEPFRDEENILHLNDDFELEEDHAITNDSAFE
                     QAIEELMLVEEAGEAFDNDALLSGDLTPVFFGSALANFGVQNFLNAYVDFAPMPNARQ
                     TKEDVEVSPFDDSFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQ
                     KITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQTYSFQDLPQFTPEI
                     FMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKN
                     EYNVDVVMEPVGRKIARWIENEDQITDKMNTSRSILVKDRYDDLVFLFENEFATRWFE
                     EKFPEIKLYSLL"
     gene            complement(9361..9621)
                     /locus_tag="OY092_000834"
     CDS             complement(9361..9621)
                     /locus_tag="OY092_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YueH family protein"
                     /protein_id="HCX1075797.1"
                     /translation="MALLINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMT
                     LDEETCFEAILMQLFVFKEEEEAESIASQLTDWIETYKKEKD"
     gene            complement(9602..11086)
                     /locus_tag="OY092_000835"
     CDS             complement(9602..11086)
                     /locus_tag="OY092_000835"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HCX1075798.1"
                     /translation="MDASTLFKKVKVKRVLGSLEQQIDDITTDSRTAREGSIFVASVG
                     YTVDSHKFCQNVADQGCKLVVVNKEQSLPANVTQVVVPDTLRVASILAHTLYDYPSHQ
                     LVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLGTNGFQINETKTKGANTTPETVSLT
                     KKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHA
                     KSLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPYEVFSYGIDEEAQFMAKNIQESL
                     QGVSFDFVTPFGTYPVKSPYVGKFNISNIMAAMIAVWSKGTSLETIIKAVENLEPVEG
                     RLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMG
                     RVACRADYVIFTPDNPANDDPKMLTAELAKGATHQNYIEFDDRAEGIKHAIDIAEPGD
                     TVVLASKGREPYQIMPGHIKVPHRDDLIGLEAAYKKFGGGPVDQ"
     gene            11519..12694
                     /locus_tag="OY092_000836"
     CDS             11519..12694
                     /locus_tag="OY092_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diglucosyl diacylglycerol synthase"
                     /protein_id="HCX1075799.1"
                     /translation="MVTQNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHD
                     LFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDKLDKCFYKYYGLNKLINLLIK
                     EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYVATKETKQ
                     DFIDVGIDPSTVKVTGIPIDNKFETPINQKQWLIDNNLDPDKQTILMSAGAFGVSKGF
                     DTMITDILAKSANAQVVMICGKSKELKRSLIAKFKSNENVLILGYTKHMNEWMASSQL
                     MITKPGGITITEGFARCIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVAS
                     LTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQEIYGKVPLYARFFVK"
     gene            12672..13862
                     /locus_tag="OY092_000837"
     CDS             12672..13862
                     /locus_tag="OY092_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001154225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075800.1"
                     /translation="MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVT
                     SIAVAITSLAFSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPAS
                     PFVIIFSAMMLGIAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIK
                     VHPTRFAFMMSLVVLIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGIL
                     LQGAAIAALVPILPTYATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFM
                     YGVILSGFILYMILIFTLSMIVNIHIVWIIALAIGLMYGILLPAWNTFMARFIKSDEQ
                     EETWGVFNSIQGFGSMIGPLFGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIANR
                     EKAK"
     gene            complement(13975..14484)
                     /locus_tag="OY092_000838"
     CDS             complement(13975..14484)
                     /locus_tag="OY092_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcG family protein"
                     /protein_id="HCX1075801.1"
                     /translation="MILGLALIPSKSFQEAVDSYRKRYDKQYSRIKPHVTIKAPFEIE
                     DGDLDSVIEQVRARINGIPAVEVHATKASSFKPTNNVIYFKVAKTDDLEELFNRFNGE
                     DFYGEAEHVFVPHFTIAQGLSSQEFEDIFGQVALAGVDHKEIIDELTLLRFDDDEDKW
                     KVIETFKLA"
     gene            complement(14678..15436)
                     /locus_tag="OY092_000839"
     CDS             complement(14678..15436)
                     /locus_tag="OY092_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HCX1075802.1"
                     /translation="MSEFKTGKINKHVLYSNILNRDVTISIYLPESYNQLVKYNVILC
                     FDGLDFLRFGRIQRTYESLIKEARIDDAIIVGFHYEDVDKRREEFHPQGSRSHLTIQS
                     VGKEILPFIDSTFSTLKVGNARLLVGDSLAGSIALLTALTYPTIFSRVAMLSPHSDDK
                     VLDKLNQCANKEQLTIWHVIGLDEKDFTLPTNGKRADFLTPNRELAEQIKKYNITYYY
                     DEFEGGHQWKDWKPLLSDILLYFLRKNTDDQHYE"
     gene            complement(15581..17149)
                     /locus_tag="OY092_000840"
     CDS             complement(15581..17149)
                     /locus_tag="OY092_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HCX1075803.1"
                     /translation="MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRHFKEM
                     IRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAFLG
                     ASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
                     PGVQSNAIASSMHNAIHVPQWLMGAIVVVILGLIIFGGVRSIANVATAVVPFMAIIYI
                     LMAVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTG
                     PHAAAAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPH
                     LIKDGGIYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFF
                     AFTTILSYYYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFG
                     DLGVGLMAWLNIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWL
                     KTYPERLKQARAKK"
     gene            17491..18576
                     /locus_tag="OY092_000841"
     CDS             17491..18576
                     /locus_tag="OY092_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCX1075804.1"
                     /translation="MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPF
                     LISGFLFYICLPFQNLLEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLI
                     SQTPALQKEAEQIIKFALAQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLI
                     STIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQV
                     TVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTT
                     FIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLY
                     AVLKTVVSNIFKYRQRIIDKANSNVKD"
     gene            complement(18773..19543)
                     /gene="fabI"
                     /locus_tag="OY092_000842"
     CDS             complement(18773..19543)
                     /gene="fabI"
                     /locus_tag="OY092_000842"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HCX1075805.1"
                     /translation="MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS
                     RKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDL
                     RGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM
                     GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLK
                     RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK"
     gene            complement(19821..21665)
                     /locus_tag="OY092_000843"
     CDS             complement(19821..21665)
                     /locus_tag="OY092_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter family
                     protein"
                     /protein_id="HCX1075806.1"
                     /translation="MEFLSLVIVVLAAFLTPIIVNRLNINFLPVVVAEILMGIVIGNS
                     FLNIVERDSILNILSTLGFIFLMFLSGLEIDFKAFKKDKRARQGQNDDESSIPGHLNL
                     ALTVFAFIMIISILLAYVFKWLGLVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIG
                     QFILLVAVLADLVTMILLTVYGAINGQGGSTIWLIGILVVFTAISYILGVQFKRMSFL
                     QKLMDGTTQIGIRAVFALIILLVALAEGVGAENILGAFLAGVVVSLLNPDEEMVEKLD
                     SFGYGFFIPIFFIMVGVDLNIPSLIKEPKLLIIIPILIVAFIISKLIPVMFIRRWFDM
                     KTTIASAFLLTSTLSLVIAAAKISERLNAISAETSGILILSAVITCVFVPIIFKKLFP
                     VPDEFNRKIDVSLIGKNQLTIPIAQNLTSQLYDVTLYYRKDLSDRRQLSDDITMIEIA
                     DYEQDVLERLGLFDRDIVVCATNDDDINRKVAKLAKAHQVERVICRLESTTDDTELVD
                     SGIEIFSSYLSNKILLKGLIETPNMLNLLSNVETSLYEIQMLNYKYENIQLRNFPFGG
                     DIIFVRIIRNNESIVPHGDTQLRYGDRLIVTGAKEYVDELKQELEFYF"
     gene            complement(21675..23060)
                     /gene="mgtE"
                     /locus_tag="OY092_000844"
     CDS             complement(21675..23060)
                     /gene="mgtE"
                     /locus_tag="OY092_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HCX1075807.1"
                     /translation="MSMNTDEKERVQEELYDQTLLDQYLENDDIDQFRDEFLALHTYE
                     QSEYFEDTTDENRQKIFQYLSPEEVANFFDQLDIDDDEYELLFDKMNATYASHILEEM
                     SYDNAVDILNELTKPKVASLLTLMNKDDANEIKALLHYDEDTAGGIMTTEYLSLKAHT
                     PVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDLIVAENDAYIEDIMNERVI
                     SVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGIITIDDILDVMDEEASEDYSRLAG
                     VSDIDSTNDSIIKTALKRLPWLIILTFLGMITATILGRFEKTLENVALLAAFIPIISG
                     MSGNSGTQSLAVSVRNITTGEINEQSKFRIALREAGSGVLSGVVCSTILFTIIVAIYH
                     QPLLALIVAGSLTCAMTVGTFVGSMIPLLMNKLNIDPAVASGPFITTINDIISMLIYF
                     GLATSFMAYLI"
     gene            complement(23081..23935)
                     /locus_tag="OY092_000845"
     CDS             complement(23081..23935)
                     /locus_tag="OY092_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HCX1075808.1"
                     /translation="MKFKYHISQQETVKTFLARHDFSKKTVSAIKNNGALIVNDEPVT
                     VRKQLMPNDILEIHLPREIPSVNLIPYARKLEVLYEDAFIIIVTKPNNQNCTPSREHP
                     HESLIEQVLYHCQEHGENINPHIVTRLDRNTTGIVIFAKYGHIHHLFSKVNLKKIYTC
                     LVYGKTHTSGIIEANIRRSKDSIITREVASDGKYAKTSYEVINQNDKYSLCKVHLHTG
                     RTHQIRVHFQHIGHPIVGDSLYDGFHDKIHGQVLQCTQIYFVHPINKNNIYITIDYKQ
                     LLKLFNQL"
     gene            complement(23932..24741)
                     /locus_tag="OY092_000846"
     CDS             complement(23932..24741)
                     /locus_tag="OY092_000846"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HCX1075809.1"
                     /translation="MRYTILTKGDSKSNALKHKMMNYMKDFRMIEDSENPEIVISVGG
                     DGTLLQAFHQYSHMLSKVAFVGVHTGHLGFYADWLPHEVEKLIIEINNSEFQVIEYPL
                     LEIIMRYNDNGYETRYLALNEATMKTENGSTLVVDVNLRGKHFERFRGDGLCVSTPSG
                     STAYNKALGGALIHPSLEAMQITEIASINNRVFRTVGSPLVLPKHHTCLISPVNHDTI
                     RMTIDHVSIKHKNVNSIQYRVANEKVRFARFRPFPFWKRVHDSFISSDEER"
     gene            complement(24758..25393)
                     /locus_tag="OY092_000847"
     CDS             complement(24758..25393)
                     /locus_tag="OY092_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HCX1075810.1"
                     /translation="MNQWDQFLTPYKQAVDELKVKLKGMRKQYEVGEQASPIEFVTGR
                     VKPIASIIDKANKRQIPFDRLREEMYDIAGLRMMCQFVEDIDVVVNILRQRKDFKVIE
                     ERDYIRNTKESGYRSYHVIIEYPIETLQGQKFILAEIQIRTLAMNFWATIEHTLRYKY
                     DGAYPDEIQHRLERAAEAAYLLDEEMSEIKDEIQEAQKYYTQKRSKKHEND"
     gene            complement(25410..25757)
                     /locus_tag="OY092_000848"
     CDS             complement(25410..25757)
                     /locus_tag="OY092_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075811.1"
                     /translation="MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYT
                     LDDGKAYAYLIFVQETWTMLHENMTKKIIINDELELTEFHQELTYILDNIKGNNNYGK
                     EFVATVEETFDIE"
     gene            25943..26536
                     /locus_tag="OY092_000849"
     CDS             25943..26536
                     /locus_tag="OY092_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HCX1075812.1"
                     /translation="MATNHEIEFKQMITASIYNKLQEKYFKDSVLFKQVNYYIDTPDF
                     KLKEHRSALRIRVKDNQYEMTLKTPAKVGLLEYNYIVDIKPEMNLIISNDNLPDDIRQ
                     IIVEQFGVKDTTLSILGALTTYRQETKYKGDLLVLDKSEYFDTTDYELEFEVKDYNQG
                     LQKFQSLLHELNLEHHQPLNKLQRFFKKKETLSNNIN"
     gene            26640..27005
                     /locus_tag="OY092_000850"
     CDS             26640..27005
                     /locus_tag="OY092_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin"
                     /protein_id="HCX1075813.1"
                     /translation="MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSR
                     KQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQG
                     VGDYLFERLRLTANHMVNS"
     gene            27028..27834
                     /gene="yjbH"
                     /locus_tag="OY092_000851"
     CDS             27028..27834
                     /gene="yjbH"
                     /locus_tag="OY092_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease adaptor protein YjbH"
                     /protein_id="HCX1075814.1"
                     /translation="MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAIL
                     SKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFDNIALAYKAAELQGRVRAERFIH
                     LMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIE
                     QAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLV
                     TMEELLTIYEWPEKLLNKELKKLAIQQKIEKLKYPDGDFWKSKMPKIKSK"
     gene            complement(28294..30102)
                     /gene="pepF"
                     /locus_tag="OY092_000852"
     CDS             complement(28294..30102)
                     /gene="pepF"
                     /locus_tag="OY092_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HCX1075815.1"
                     /translation="MSQQLSREEQERKYPEYTWDLTTIFKDDEAFEAAFKEVENELGK
                     EEQFKGHIGDSAETLYNALELEDTLGTKLEKVYVYAHLKQDQDTTNDKYTGMESRAHQ
                     LIIKFSSAWSFLVPEILQIDEDKIQSFVNSYDKLQKFAFDLKLINEKRPHILDAETEK
                     LLTEAQDALSTPSNVYGMFSNADLVFEDAIDKDGNAHPLTQGTFIKYLESDDRKLRES
                     AFRNVYKAYGAHNNTLGATLAGEVKKNVFNARTHNYKTAREKALSNNHIPENVYDNLV
                     KTVHKYLPLLHRYTELRKELLGLDDLKMYDLYTPLIKDIKFEMPYEEAKEWMLKALEP
                     MGEEYLNVVKEGLNNRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSNTISDLYTLVH
                     EFGHSAHSYFSRKFQPSNSSDYTIFVAEVASTCNEALLSDYMDKHLDDEKRLLLLNQE
                     LERFRATLFRQTMFAEFEHKIHAIEEAGEPLTPTRMNEEYAKLNKLYFGDSVETDEDI
                     SKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGKPAVDRYINEFLKKGSSNYPI
                     EILKNAGVDMTTPEPIEQACEVFEQKLNAFEKLMKA"
     gene            complement(30150..>30295)
                     /locus_tag="OY092_000853"
     CDS             complement(30150..>30295)
                     /locus_tag="OY092_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HCX1075816.1"
                     /translation="LVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDRGNDVQ
                     ILF"
BASE COUNT         9986 a         5478 c         4218 g        10613 t
ORIGIN      
        1 catctttata tcattaattg aatttttata ttaatggttt aaaacttaat aaagcgaggt
       61 tttgcttatg tattctcaaa atatttatgt gatacgcaaa ggagacatgg ttattcgacc
      121 agcatttgat gatgacgatc aaagaaacgg tagtgaaata attcggtttg acaaaacgcg
      181 tattcaaaat ccttttaaag tccagaaaat cattgaacgc tcttgcaaat tttatggtaa
      241 tacttatctt ggcaagaaag cagagacaaa ccgcattact ggcatttcta gtaaaccacc
      301 tattttacta acaccattat ttccaactta ttttttccca acacattctg acagacaaaa
      361 tgaaaatatt tggttaaata tgcattatat cgaaagtatt aaagaattaa aaaatcgtaa
      421 atgtaaagtg acatttatta ataatgaatc aatcattctt catgtttcat accacagttt
      481 atggcatcaa tataacaatt ccatttttta ctattacatg gtagataaac aatctcgcat
      541 gatatcaaaa aatcccgacc aaccaataga ttataataaa gccacattga atgtgtttga
      601 agcattgaca cgctattctt tatttgaaga taaataaatt gtttattttt aaaatatgcg
      661 gaatgtttta taaatatagt gtaaatgttc tgcatatttt tttaaggtat ctattgcaaa
      721 ttaacttaat cttgttataa taatatttgt gcttgatatt caaacacata caaattaatc
      781 cacagtagct cagtggtaga gctatcggct gttaaccgat cggtcgtagg ttcgagtcct
      841 acctgtggag ccattggaaa cgtactcaag ttggctgaag aggcgcccct gctaagggtg
      901 taggtcgcga aagcggcgcg agggttcgaa tccctccgtt tccgttactt gcttaaatgg
      961 tatataccat ttaagctttt ttgtttactt atatatataa tgaatgagat tttcactgtt
     1021 cttttatatc aattttaaaa ttctaaaaac ctttcctaga taatcttctc taagaaaggt
     1081 ttttagaatt gttaaactta taattaattt attacatagc aatatttacc tgtttttaac
     1141 tacaaaatta tcactacatg aaatacgata attcggatct cttaacttct ctgcaattaa
     1201 tgtactcatt gtttcatcgt atgattcatg tataatagca tttttcaaat aattcttgta
     1261 gttacgataa caatagtcag tcattgtaac tctataactc ttagtcaaat caatttgatc
     1321 taacattact cgttgcccag gttcttgatt cataccaatc tcataattga atccttgcca
     1381 cattgtacat aacgtttcat caataattgt taagcttaat tgctcgttaa caaaatctaa
     1441 atgtgaataa ctatactcca atatatcttt gatattttga ccactaattg tcatatccat
     1501 tggcttatct ggatatgggt atgcatgata caaatcttca tttcgaatct gtccactcaa
     1561 ccccttctct ccgttcatag gcacgtggac acatgttata tcattatcaa atgcaaggtg
     1621 aattgcatca tgtaataatt gcgaaaatgg atgtgtttga cagactaaat cttgtaaccc
     1681 atttactgat aacatcaaac ctttatcact tatgatttcc tgtgaccaat aagccactgc
     1741 ttttctatca tagaatgtta aatctaataa ttcttgatcc tcttcatact catttaagtc
     1801 aatcacttta gaatcaatac tttcaacatc ataagttgtt gttctctttt taaaattaat
     1861 cgaaagatgt acaagctctt ttgcatcttg accagcctga acataatacg tttcatgatc
     1921 ttgacctact attgtttgat gctgatgagc tgtaatcatt aaatctataa caccgagttc
     1981 ttccattaat ttttcagctt cattcgaact tgccttttta tttttcgtgc tattactaat
     2041 tttattcaat ccaccatgat aaattacaat caaaaaatct ggctcttcaa cttcatggat
     2101 atatctaatc catcgttttg atgccactaa tgtcttttca atagatacat cttgttccat
     2161 ttcagaatac tcattttcca ttaaaccatc tgctgtgacg cctacgatag caatttttaa
     2221 gtcaccaaaa tgtttaatac aatatggcgt tgaaaaatat ggctccttag taacattgta
     2281 ttcaatattt gctgataacc atggaaaacg tgccaaagca attgaacgag ttaaaaatga
     2341 taaaccaaac ttgaattcac ttggactcac accgctagca tcataatgca ttctgttcat
     2401 caactttatc attggatgtc gtttataagg tgcaacaata gcataataat aggccgctaa
     2461 cgagccagct aaacttccgc cactatctaa taaaatgacg cgatgatttt gtgctcttac
     2521 ttggttaaca taagtaccag ctctatatat atttgaacca taatcaccat ttaagaaatg
     2581 actatgcata tctgacgtag ttaaaatctc tacattaatg ttttcatttt tttccatcat
     2641 gttacacctc tcattgttac tagtttacca ttttcaaaac caatcgtctt ataaaataag
     2701 ttaaaaatac aaactaaaaa agcaatctaa gttccagtta aaatctacat taactaaact
     2761 tagattgcta ttatattatc ctatttgaat acgttctttt ggataatgga atttatctgg
     2821 ttctcgacgt cctgctatca taatgataaa tgatattaag ccaacacgtc ctataaacat
     2881 gagtaccatt agtacgacct tggaaatatc actaatatca cttgtgacac caagcgatag
     2941 tccacaagtt ccaaatgcag acatgacttc aaaaaatact tgtaaaaatg taagcttacc
     3001 attttcagta gctgatataa ttagcattcc taaaaatgtt aaaattgtcg ccattgtaaa
     3061 tactgcaaat gaacgttgaa tatccataat gtgtacttct ctattgtaaa ctttaatgga
     3121 tgttttatcg gcattattac taaagttaat taaaaacaaa attaaaatag cgaatgttgt
     3181 tgtacgaata ccgccaccaa ccgaacttgg cgaagaacct ataaacatta aaatacccat
     3241 gataatattc gtagggtcac ttagtgttgt cacatcaatt gtttgaagac ccgcacttct
     3301 tgtagtcgct gattgaaata gcgaatagaa taacgattga tgccaactta atcctttgaa
     3361 cgcatggtta tgttcaaata atagaatggc taatacccca acaataaata aaaataaata
     3421 tgttgatgtc gtaattttag taaataatga aaatctaaaa ttagtaaccc tattttgaat
     3481 ataagcttta acttctaata atactgggaa gccgattgat cctaaaatta ttaaaaatat
     3541 aactatcgct tgtacaaaat aatcatgtgc ataaggaatt aatgacttac ctgtaatatc
     3601 taatccacca ttggtagtgg cagaaataga aacaaaaaca ccttgcatga ttgcatattt
     3661 taaatctgga ttatctcgat aaaagtaaaa tgctaataac atggctccta cgagttcgat
     3721 tacaaatatt gattttacaa tatcaataat caatttgacg gtaccactca ttgtgttttt
     3781 gttattatct aacataatta actgacgttc tctaattcca atatgtttac ctagtaccac
     3841 ccataacatc gtaccaattg ccatgacgcc aattccacca atatttaata tcacgaggat
     3901 aattaattgt ccaaatgtag aataggtatc gacaatactt atcggagaca atccagtaac
     3961 actaattccg gatacggcaa caaataatgt gtcaattgga tttacttcta cacctggttt
     4021 atgaacatac ggtaagttta ataataaaaa tgcaatgaca attgcgacga tatagtacaa
     4081 tacaatacct tgttgagggc ttgatctttt taaaaactgg ctaaaaattg acacgttgtt
     4141 cacctcaaca ttattttagt ttaatattaa tttctttctc tttaccatct ctataaatct
     4201 tcgctgtaat tgatttcaag tcatctttat gactaaatat aatctgccta aagcgtaaat
     4261 catcttctaa aagtttgcca tctaattctg taattacatc accttttttc agaccagatt
     4321 gatccgctaa accattgttg tcaacttgat ctacaacaac accgttctta acttttcctg
     4381 gcaatttaac tgcttgtctt tcaaaactat ttagactggc aatattcttc attttaacac
     4441 ctacatcggg atagtcaatt ttaccttttg tttctaaacc ttttacaatc ttttgtactt
     4501 cattaacagg tattgcaaat gacatgtttt caacgtttgg catactaatt ttagctgcaa
     4561 ctacaccaat taattttcct tctctattga cgacagcacc acccgagtta cctggattta
     4621 ctgatgcatc aatttggaaa gctttcatca acatatcata tttattatct ttatcgaaat
     4681 caataggaac atttctgttc agacctgaaa taataccttc agtcacagtg cctttaaagt
     4741 ctacaccaag tggattacct acgactaata ttggctctcc taacactaaa ttatttgaat
     4801 ctccaatagc tatctctttc actgaactgt ctgaagaagt tgctttaaca acagctaaat
     4861 ctgaccattt atctttacca agcactttcc caacaacact tttattattc gagaaagtta
     4921 ttttttgatt ttctttatca ccgacaacgt gtgcattcgt aacaatatat aacgtatctc
     4981 cagatttttt atatacaaca cctgatccta cttcgtcttg agatgcttta tctttaggta
     5041 atgatgaatc ttttgatgtt tcattttcaa ctgtaacgac cgatttaact gtgttattgg
     5101 catttttcat cgttgtcgta tatttttgag catctgtatc attattatca ttcatgcgat
     5161 catttttatt cacattatta aaaatggcat tcaaaataac aattagaata ataataccca
     5221 ttagaataac taatttaggc caatacatca tccaaaactt tttcaaaatg tcactataat
     5281 tattatttgt agcgcgccct ttgttcaaat ttgatgtagc ctttttttga ttattatttg
     5341 ccgatgtctt tgtatttgtt ttttgaccgt ttaatttatc atggtcatta atagaaatat
     5401 ttcttttttc agtgctacga tgagatgcac ttgactgact ttgatatccc accgtttcag
     5461 acgagtctgc attttgttta tgtttatctt caacatgaat tttttcatca agttttcgat
     5521 cgtcatctgt ttttgataat gatggtgtat tgatatcatt atcaggatta tcgtcaacaa
     5581 tatgattttc tctcataacg ttatctttat catcacttat cgatggtgta tgatgactta
     5641 aatcattttc atgattagac ttgtcatttt gttcgctatc accatatgta taggtttttg
     5701 tttgctcatt ttgactttgc tgtcttttca atttctgttc ttccggcaaa gttaatggct
     5761 tctgattatt tacttcatca tcagattccg acaattttgg tactgtattt gatttgtctg
     5821 atattacttc agatttcaga ttactacttt tattttcatc tgaactgtct ttttttattt
     5881 cctctgtctg catcgagctg tctgaatcag ttcttgaaga ctcaaaatca attctagtct
     5941 ctttatcatg ttctgaaggt ttagaaagta catgttgctc ttcatgacca actttgtttt
     6001 tatctgaact tagctttctc atgtcagttg attctatttt atcggttgat ttagttgata
     6061 aagtcgcatc agaattttgc tcataatatt ttgatttctc tgtatcttgg tccactgaat
     6121 ctaatgaatt ttgtttttta aatacatcgt ctgttaaata atgatctctg ctatatgctg
     6181 acttactatc ctgattactt ttactttctt cagttttatt ctcattaaca tcacggtttc
     6241 tctgttctaa atgcgatgat aaactgtttt taaaacgttc gtgcttatca attgaatctt
     6301 tatgtatttg cttatctgct ttttttgatg ttgtatgatc tatattttgt ttatcttgat
     6361 gttgttttaa attttcttct ctgtcttcgt tgtggaagaa ttcacgacgc ttacgtcggt
     6421 actgactttt aggaattaca tgttttttac caatatccac taatgtccac tccattcaat
     6481 aaaatcactt ttcattatga cacattaaca cttaatttgc tttaaaatct atataatttc
     6541 tattgaaaaa atgctaaata taaaaggcac attttcttaa tgctatatcg catattttga
     6601 ttcatattct tcaaaatcca tttttcataa atcactcaat taaatgaaaa aggacaacct
     6661 taaactaaat taagattgtc cgcttcacat caattattta tgcgattttt tatttttaac
     6721 aactgaacct aaccaaccga taattactaa tccaattagt actgtccaga aaatagattg
     6781 ccataatacg ccatgtggga agtgctcagg caatacagcg atgtctgggt gcgctaatac
     6841 catgacaact aatttaacac ctacccaacc aacgatcgcg aaggctgcac cttcaagtcc
     6901 tggatatttg tttaatagct ctacaaacca tgttgctgca taacgcatta gaataacacc
     6961 aatcattcca cctaggaaca tgactacgaa ctgacctaag tccataccac caaagtgaat
     7021 accaacttta ggaagtgtta cagcaatagc taaagcagca agcatagaat ctatggcaaa
     7081 tgcgatatct gcaaattcta ttttcaacac agttccccag aatgatttgt tacttgcttt
     7141 aatctcttca ccagattcat cataatgatg atcatctcca gcttcaggac tttcaatttc
     7201 tgggtgttta aagaactgcc acagattttt gattgacata taaattaagt aaaccgctcc
     7261 tgcagcttga ataaaccaaa agttcgcgat aatactaatt aagaataatg ctaaaaatct
     7321 aaatacaaat gcacctaaca aaccgtaaaa caaagctttt ttacgttgtt cgggtggtaa
     7381 gtgcttaacc attacagcca taacaatcgc gttatctgct gctaataagc cttctaaaaa
     7441 tactaaaacg acaagtaccc ataaataagg taagatcaaa cttggatcca ttaacatgta
     7501 caactccttt aaataaataa gttaagtaca aacaaaaaga cctatgctaa ataaatagca
     7561 aaggtctcac taagcaattt aaattgccca ctttaccgga agatatcttc gtaatgacga
     7621 taaagtgtcg aatcatttat acggtcatga ttcttaagtt actcccctct gacaaaatgc
     7681 cataggttat tcatttgata catcatagta tacctttttc ttttaaaata tacaatttat
     7741 ttttcttcaa cgaaacaatt atttttaatg taacaaattc gattatacaa ttgagctgtt
     7801 aaagtaaact atacaattta atttcaggga atttctcttc aaaccatctt gttgcaaatt
     7861 cattttcaaa taagaatact aaatcgtcat atctatcttt cactaaaatc gatcttgatg
     7921 tgttcatctt atctgtaatt tggtcttcat tttcaatcca acgtgcaatt ttacggccta
     7981 ctggctccat aacaacatca acattatatt cgtttttcat tctatgttcg aaaacttcaa
     8041 attgtaactg accaacagca cctaaaataa tttggtttgt gtgtaatgtt ttatagtatt
     8101 gaatcgcacc ttcttgtact aattgttcaa tacctttatg gaaatgcttc tgtttcatga
     8161 cgtttttagc agaaactttc ataaaaattt ctggcgtaaa ttgtggtaaa tcttggaaac
     8221 tgtaggtttg ttttccacca actaaagtat ctccaatttg ataattacca gtatcatata
     8281 gtccaatgat atcgcctgct acagcatgat tcacagtttc tttatcgtct gccataaatg
     8341 acgttgaacg tgtgatcttt tgctttttat tagtacgttg caaagtaaca tccataccac
     8401 gttcaaatgc accactaacg acacgcataa aggcaattct atcacggtgt ttagggtcca
     8461 tgttggcttg aattttaaag ataaatcctg aaaatgaatc atcaaacggg cttacttcaa
     8521 cgtcttcttt tgtttgtctc gcatttggca ttggcgcaaa atcaacatat gcatttaaga
     8581 aattttgtac accaaagtta gctaaagctg aaccgaaaaa tacaggtgtt aagtctccac
     8641 tcaacagcgc gtcattatca aaggcttcac ccgcttcttc aaccaacatt aattcttcaa
     8701 tcgcttgttc aaaagcacta tcatttgtaa ttgcatgatc ttcttccaac tcaaaatcat
     8761 cattcaaatg taatatattt tcttcatctc taaatggttc aattgtttta gactttctat
     8821 caatgatgcc aaagaaactt tgtcccatac caattggcca attcataggg tatgtttcaa
     8881 tatttaatgt ctcttcgatt tcatctaata attcaaatgg ttctttacct actcggtcta
     8941 atttattaat gaatgtaaag attggaatac cacgcatttt acaaacttta aataacttca
     9001 atgtttgtgg ttcaatacct tttgcacagt ctatgaccat gacagcactg tcaactgcca
     9061 ttaatgttct atacgtatct tctgaaaagt cttcatgtcc tggtgtatct aagatattga
     9121 ttttataatc atcgtaatca aattgcatta ctgaactagt tacagaaata ccacgctctt
     9181 gttcaacttt catccagtca cttgtcgcaa atttaccagt cttcttccct ttaactgtac
     9241 ccgcttcacg aatagcacca ctgaagtaca atagtttttc agttaacgtt gttttccctg
     9301 catcgggatg tgaaataatc gcaaaagtct ttctagactc aacttcttgc tttaagttca
     9361 ttagtctttc tcctttttat atgtttctat ccaatctgtt agttgtgatg caatcgattc
     9421 tgcctcttcc tcttctttaa aaacaaacaa ttgcatgagt attgcttcaa aacaagtttc
     9481 ttcatctaat gtcattgcca tctgatatga ccaaaaccaa tctggtatag caatgattat
     9541 ctggttattt aatgcttcga ataaataaac atcaatagtt ttaccttcat caataaatct
     9601 tttattgatc aacagggcca ccaccgaact ttttgtaagc tgcttcaagg ccaattaaat
     9661 catctcgatg tggcacctta atatgccctg gcatgatttg atatggttct cttccttttg
     9721 atgctaaaac gacagtatcc ccaggctcag ctatgtcaat tgcatgtttt atcccttctg
     9781 cacgatcatc aaattcaata tagttttgat gtgttgcacc tttggctaat tctgccgtta
     9841 acattttcgg gtcatcattt gccggattat ccggtgtgaa aatgacataa tctgcacgac
     9901 aggcaactcg ccccatttca ggcgttttag ttaaatcacg ttcgcctgcc ataccaacta
     9961 aaaatatcaa cttttgcttt acaaaaggct gtactgcatc gattaatttg ttcataccat
    10021 cagctgtatg tgcataatcg ataattaaat caataggtaa cgaaggatct aaaacttcta
    10081 atcgcccttc aacaggttct aaattttcaa cagctttaat aatcgtttct aaagatgtac
    10141 ctttactcca caccgcaatc attgccgcca taatattaga aatattaaac ttaccaacat
    10201 aaggcgattt tactgggtaa gttccaaaag gcgttacaaa atcaaagctg acaccttgta
    10261 aagattcttg aatattttta gccataaatt gggcttcctc atcaattcca taactaaata
    10321 cttcataagg cgtcactgtt cttaaatact cagaaaatga atcgtcattg tttaacacga
    10381 catacttttc tttcgacaaa tcttcaccta attgactaaa caataaagac ttcgcgtgtc
    10441 cgtatgcttc cattgtgcca tgaaaatcta aatggtcttg tgttaaattt gaaaatattg
    10501 caacgtcaaa ttcaacgcct cgcagtcgtc ctaatactaa gccatggctt gatacttcta
    10561 atgtcataga ttcagcgcct gcatcaactg cttctttaat tttcttagtt aaagaaactg
    10621 tttctggtgt cgtatttgca ccttttgtct ttgtttcatt aatttggaaa ccattagttc
    10681 ctaaatatgc actatttttt tgtaactttc tttgaattaa atgaatcatc gtcgcaatag
    10741 aagttttacc atttgtaccc gttacaccaa atgtcactaa ctgatgactc ggataatcat
    10801 ataatgtgtg tgctagaata ctagctactc ttaatgtgtc cggcacaacc acttgtgtta
    10861 cgttagctgg taatgattgt tctttattga ccactaccaa cttacaccct tgatcagcta
    10921 cattttgaca gaacttatga ctgtctacag tatatccaac tgaagcgaca aaaatgctac
    10981 cttctctcgc tgtacgtgaa tcagtagtga tatcatctat ttgttgttct aaagaaccca
    11041 atacacgctt tacttttact ttcttaaaca acgtacttgc atccaaactg aaccgctcct
    11101 ttttctacaa tatgtttatt atacacgttt tgttgatgtt aataaattta taatttcact
    11161 gttatatcct actaatcagc attttctaat ttctactatt aaaaataaaa catacggtat
    11221 tatgaattag ttttacaatt atggctcatc ttaaattatt aaaaccatct tgtaacatgg
    11281 tataatatca taattgtttc caaaaatatg ctataattgt atactggata attttaaata
    11341 tacaaataaa acatagaaca ataaattgct ttataaaata acgttttatt ttgtatcaat
    11401 tcatctattg attaaaattg ctataaatgt aacgactttg cgtctttatt tcttttataa
    11461 tgccgtaaaa taagttacac ttaaataaaa ttttcaaact aacggagggt ggctattaat
    11521 ggttactcaa aataaaaaga tattgattat tactggctca ttcggtaacg gtcatatgca
    11581 agttacacag agtatcgtta atcaacttaa tgatatgaat ctagaccatt taagcgtcat
    11641 tgagcacgat ttatttatgg aagctcatcc aattttgact tctatttgta aaaaatggta
    11701 tatcaatagc tttaaatatt ttagaaatat gtacaaaggg ttttattaca gccgcccaga
    11761 taaactagac aaatgttttt acaaatacta tggacttaat aagttaatta atttattgat
    11821 aaaagaaaag ccagatttaa tattattaac gtttcctaca ccagttatgt cggtactaac
    11881 tgagcaattt aacattaata ttccagttgc tacagtgatg acagactatc gcttacataa
    11941 aaactggatt acgccgtatt caacaagata ttatgtggca acaaaagaaa cgaaacaaga
    12001 cttcatagac gtaggtattg atccttcaac agttaaagtg acaggtattc ctattgataa
    12061 caaatttgaa acgcctatta atcaaaagca gtggttaata gacaacaact tagatccaga
    12121 taagcaaact attttaatgt cagctggtgc atttggtgta tctaaaggtt ttgacacgat
    12181 gattactgat atattagcga aaagtgcaaa tgcacaagta gttatgattt gtggtaagag
    12241 caaagagcta aagcgttctt taatagctaa gtttaaatct aacgagaatg tattgattct
    12301 aggttatacc aaacacatga atgaatggat ggcatcaagt caacttatga ttacgaaacc
    12361 tggtggtatc acaataactg aaggtttcgc ccgttgtatt ccaatgattt tcctaaatcc
    12421 tgcacctggt caagagcttg aaaatgccct ttactttgaa gaaaaaggtt ttggtaaaat
    12481 cgctgatact ccagaagaag caataaaaat tgtagcaagt ttaacgaacg gtaatgagca
    12541 attaactaac atgattagta caatggaaca agataaaatt aagtatgcta cacagacaat
    12601 atgtcgagac ttacttgatt taatcggtca ttcatcacaa ccacaagaga tttatggaaa
    12661 ggttccttta tatgcaagat tcttcgttaa ataattacgc taatcataaa aatttcattt
    12721 taatgcttat tatcttattt ttaatggaat ttgcgagagg catgtatatc ctaagctata
    12781 ttaatttctt gccaacagtt acatccattg ctgtagcaat aacgtctcta gcattttcaa
    12841 tacattttat tgctgatgca tctacaaact ttgttatagg atttttactg aaaaaattcg
    12901 gcacaaaaat cgttttaacg actggattta ttttagcatt tacaagttta tttttagtta
    12961 tttggtttcc agcatcacct tttgtaatca tatttagtgc tatgatgctc ggtattgcag
    13021 ttagtcctat ttgggtcatt atgttatcca gtgttgaaga agataaacgt ggcaaacaaa
    13081 tgggctatgt ttatttttca tggttgttag gcctattggt aggtatggtt tttatgaatc
    13141 tacttatcaa agtgcaccca acacgctttg ccttcatgat gtctttagtc gttttaattg
    13201 catggatatt atattatttt gtcgatgtaa agttaacaaa ttataatact cgtccagtta
    13261 aagctcaatt gagacaaatt gttgatgtga caaagcgcca tttattgttg ttccctggta
    13321 ttcttttaca aggtgccgca attgctgccc tagttcctat attaccaaca tatgctacta
    13381 aggttattaa cgtaagcaca attgaatata ctgttgcaat cattattggt ggtatcggct
    13441 gtgcagtttc gatgctattt ttatcgaaac taatagataa ccgcagcaga aactttatgt
    13501 atggtgttat tctaagcgga tttattttat acatgatatt aatttttact ctatctatga
    13561 ttgttaatat tcacatcgtg tggattatcg ctttagctat cggtctaatg tatggcatct
    13621 tattaccagc atggaatacc tttatggcac gatttatcaa atcagatgaa caagaagaaa
    13681 cttggggtgt ttttaatagt atccaaggat tcggctcaat gatagggcca ttatttggcg
    13741 gattaattac acaatttacc aacaatttaa acaatacatt ttatttctcg gcattaatct
    13801 ttttagtctt agctgtattt tatggaagct actttatagc aaatagagaa aaagctaagt
    13861 aaggttaaaa cgtattttaa aataaagaaa atggtcattt ttattacatt caataaaaat
    13921 gaccattttc ttattaattc aaacatacta cgattaacaa tactattatg ttacttaagc
    13981 taatttaaac gtttcaataa ctttccattt atcttcgtca tcgtcaaaac gtaacaaagt
    14041 taattcatcg ataatttctt tatggtctac cccagctaat gctacttgac caaaaatatc
    14101 ttcgaattct tggctagata gtccttgtgc tattgtaaag tgtggcacaa aaacatgttc
    14161 agcttctcca tagaaatctt ctccattaaa gcgattaaac aattcttcta agtcgtccgt
    14221 cttcgcaact ttaaagtaaa tcacattgtt cgttggtttg aagctagaag cttttgtagc
    14281 atgaacttct actgctggta taccattaat acgagctcta acctgttcaa tgacagaatc
    14341 taaatcacca tcttcaattt caaatggcgc tttaattgtc acatgtggtt taattcgtga
    14401 atactgttta tcatatcttt tacggtaaga atccaccgct tcttgaaatg actttgatgg
    14461 aattaatgct aatcctaaaa tcatctgaat tcctcctttg tttaacctat tgctattata
    14521 tcaaatttct ttgaaaaccg ttacattaaa aataattcat tatacatctt ttgcaatttc
    14581 gacaaattta aattaaatca aacagtaaaa tcttttataa attatattat agaccaaact
    14641 atatgaagac aattcatact aaatctacta atgtaaatta ctcataatgt tgatcatctg
    14701 tgtttttacg taaaaaatac aataatatat ctgacagcaa tggtttccaa tctttccatt
    14761 ggtgaccacc ttcaaattca tcgtaataat aagttatatt atatttctta atttgttcag
    14821 ctaattctct attcggtgtt aagaaatcgg cacgcttacc atttgttggt aaagtaaaat
    14881 ctttttcatc tagaccaatg acatgccaaa ttgtcaattg ttctttatta gcacattgat
    14941 ttagcttatc taatactttg tcatctgaat gtggacttaa cattgctaca cgactaaaaa
    15001 tcgttggata ggtcaacgcc gttaataagg caatactacc cgctaaacta tcccctacta
    15061 ataaccttgc attacctact ttcagtgtag aaaacgtcga gtcaataaat ggcaatattt
    15121 ctttaccgac tgattgaata gttaaatgag aacgacttcc ttgtggatga aattcctctc
    15181 tacgcttatc aacgtcttca taatggaatc caacaatgat cgcatcatca atacgcgctt
    15241 ctttgattaa cgattcatat gtacgttgta ttctcccgaa acgtaaaaaa tctaatccgt
    15301 caaagcaaag aatgacatta tatttaacaa gttgattata agattctggt aaataaatac
    15361 ttatcgtgac atctctattt aaaatattac tatataaaac atgtttatta atcttaccag
    15421 ttttaaattc tgacataaaa aagtgccccc tagtagttgt attgttattg taccaagaga
    15481 cactatattt ttaaaattca aatttctgag cacctaaaat tatcaatgct gtttcttttt
    15541 ttatcaaatg atcactacat atactataaa caaaagtaga ttactttttg gcacgtgctt
    15601 gttttaaacg ttctggatat gtcttcaacc aaaagacagc attaggtaat ttattcggat
    15661 caggttgata aactgcatta taaccgtttc ctaaacgttt cttttgaatt tcataatctt
    15721 ttaaagcatt tacggcaggc ttatgtaaaa tccaaatcgc aatgatattt aaccaagcca
    15781 ttagacctac acctaaatca ccgaatgccc atgctacatc agctgtttta actgcaccgt
    15841 aaaatgtagc gaacaaaata atcacacgag caatattaat aaatatcgat gaaacttgat
    15901 tattttgatt acgcgttaaa taagcaacat ttgtttctgt aatgtagtag tacgacaaaa
    15961 ttgtagtaaa tgcaaagaag aataaagcaa atgcaataaa gtacgaacct acgccagaga
    16021 aagtaggatc aaattgataa ccactgccat ggaacgcttt atcaatgccg gcttgtgcat
    16081 acatcgcagt acctgaataa tctttacctg ttgcattttc aacataaata ccgccatctt
    16141 taattaaatg cggtgtgcca ttcgcattaa ccgtaccatc agtcacatta tatgtaccag
    16201 aaataagtat aatcagagca gttgcagtac atacaaataa tgtatcaata taaactgaaa
    16261 atgcttgtac tagaccttgt ttacttggat gtgatacttc tgctgccgct gctgcgtgtg
    16321 gacctgtacc ttgaccagcc tcatttgagt ataatccacg tttaacacca atctctatca
    16381 ttgcgccaac gataccacca aaagcagatt gtaatccaaa tgctgatttg aaaattaatg
    16441 caaataacgc tggcacttct tgtatattga tacaaatgat aatgacagcc atcagtatgt
    16501 aaataattgc cataaatggt acaacggctg ttgcaacatt ggcaatacta cgtacaccac
    16561 caaaaataat taatcccaaa ataactacaa caatagcacc cattaaccat tgtggaacat
    16621 gaatcgcatt atgcatagaa cttgctatag cgttagattg cacaccagga agcaatagac
    16681 ctactgagat aatcgtaaca atagcaaaga taattccgta aattttacca aatttaccac
    16741 caataccata ttcaatataa tacgctggtc caccacggta ttcattattt tcaactctct
    16801 tgaatatttg accaagtgta gattcaataa aagcactact tgcacctaaa aacgcagtaa
    16861 tccacatcca aaatactgca ccaggtcctc ctataaatat tgcagtagat acaccgacaa
    16921 tattacctgt accaaccctg cctgctaaag acatggctat cgcttgaaaa cttgaaatac
    16981 cattaggaga cttctctcct tgaaacatta atcgaatcat ttctttaaaa tgtctaactt
    17041 gaaaaaatcg catacgcaat gtaaatagca caccagtaat tagcaaacca taaactaatg
    17101 gcttactcca aacaacctca tttaaaaagg ttactaattt ttcaatcata agattccccc
    17161 tattgtttaa acataaaaat attatacgat taagcacgag acacttcaat atatttttca
    17221 gaatattctt ataaatatta atatgatcat ttcattattt aaacacgttt aatattaaaa
    17281 taagttattc atataaactg gtgctgtttg atccaattgc agacttacga gtcattgaaa
    17341 agtctcacaa actattgaaa gtaaatatct taaaatagaa agtgaatggt taatttaagt
    17401 atatttaaaa aatattaacc tttttaagca ctgctattta ggatatacta aataataact
    17461 aagtttagaa aaataggagg aacatcgttt atgttaaaca aggtttggtt ccgaactggc
    17521 atcgctctga ttatgctgtt cattctcatc aaactattta tggaagtgca cgaagtattt
    17581 actccaatag ctacaatcat cggttctgta tttcttccat ttttaattag tggtttttta
    17641 ttttatatct gtctaccttt tcaaaactta cttgaaaaag tcggttttcc aagatgggct
    17701 agtataacaa caatcatgtt agctttgttt gctattatcg gcttaattgt tgcgtttgtt
    17761 gcaccaatca tcatttcaaa tatcaacaat ttaattagtc agacacctgc cctacaaaaa
    17821 gaagcagagc aaattattaa attcgcacta gctcaaatgg ataaattacc tgaagatgta
    17881 acaagtagaa ttacaaatat ggttaaatca atgggtgatg gcgttactaa tattttatct
    17941 aattcattac agtacattac atcattaatt tcaaccatct tcttattgat tatggttcca
    18001 ttcttcttaa tttatatgtt aaaagaccat gaaaaattta tcccagctgt tgctaaattt
    18061 ttcaaaggtg aacgtaaagt atttttcgta gatttattaa ctgatttaaa ctttacatta
    18121 aaatcttaca ttcaaggtca agtaactgtc agtgttattt taggtatatt cttatatatc
    18181 ggttattcaa ttattgactt accatatatt cctttattag ttctatttgc tggtgtcgca
    18241 aacttaattc ctttcttagg ttcatggtta tcatttgcac ctgcagcaat actcggtatt
    18301 atagatagtc ctactacatt tatatgggtt tgtatcatta cattaattgc acaccaactt
    18361 gaaggtaata tcattacgcc aaatgtaatg ggtaaatctt taagtatcca tcctttaaca
    18421 attatcgttg ttattttagc agcaggagat ttaggtggct ttacattagt tctgattgca
    18481 gtgccattat atgctgtact taaaacggtt gttagtaata ttttcaaata ccgccaacgc
    18541 attattgata aagcaaacag taatgttaag gactaattct gtggatgtct tttaagaata
    18601 taagatacta tctcctcaaa agttgaaact acagcttttg aggagatttt tttgtgcata
    18661 aaaaaaatca gtcagatgaa atatcaaata attttccatc agtccgatta ttataaaagc
    18721 aaaaaagctt tgctcacata tatgataacg tgaacaaagc tgttgaatga tattatttaa
    18781 ttgcgtggaa tccgctatct acatgaatat tttcacctgt aacgccactt gataagtcac
    18841 ttaataagta agccgctgtt ttacctactt ctacttgatc aacgttacgt tttaaaggtg
    18901 cacgctcttc gatttcttta agaattgtat tgaaaccacc cacacctttt gcacttaatg
    18961 tacggattgg accagctgaa attgcattaa cgcgaatatt atcaggacct aagtctaatg
    19021 ctaaatattt aacatttgct tctaagctcg ctttagcaac acccatcaca ttataatttt
    19081 gaactgcgaa ttcgccacct aaatatgttg ttgcaacaat gctaccacct tctggcatta
    19141 attttttagc ttcatgagcc acaattgtta atgagtaaga actaatgtct tgagctaaca
    19201 agaagccttc acgtgaagtt tcagaaaagc gtccgcgtaa gtcttccata ttagcaaatg
    19261 cgattgaatg atatacacca tcaatattgc caacatcttt accaatttgc tcaaaaccat
    19321 taataacctc ttcatcgctt tgaacatcaa tttgatataa gtgcgcttct ggttgattta
    19381 attgttctaa taatttttca agctctttac ggctacgttc tttacggtaa gtaaatacta
    19441 atttagcacc taattgatct aaaactttag cgacaccaaa agcaatacta cgcttattag
    19501 cgattcccat gatgacatat gttttgtttt caagatttaa catgtaagat aactccttat
    19561 aataattaat ttaacggata gaatatctaa tcccagtttt aactaacttt ttattcgtca
    19621 atacatttta acactattat gactttttaa taaagttatt taaacgtatt acaacgataa
    19681 atgtttgatt tagtcctttc tgtatcaaac ttgatttacg taaaaagcat ttatttatca
    19741 aaatcatata catactagca ttttaaaatc attaatttta cgtcgtacta aaatacgtct
    19801 gcattttaat atcattattg ttaaaaataa aattctaact cttgcttcaa ttcatcaacg
    19861 tattctttag ccccggtaac aattaagcga tctccatatc gcaattgtgt atctccatgc
    19921 ggaacaatcg actcattatt acggataata cgcacgaaga tgatgtctcc tccgaatggg
    19981 aaattacgta attgaatatt ttcatattta taatttaaca tttgaatttc atatagtgat
    20041 gtttcaacat tacttaataa attcaacatg ttaggtgttt caattaaacc ttttaataag
    20101 attttattac ttaagtagct actgaaaatt tcaatacctg aatcaactaa ctctgtatcg
    20161 tccgttgtgc tttcaagtct gcaaatgaca cgctcaactt gatgtgcttt ggctaattta
    20221 gcaacttttc ggttaatatc atcgtcattc gtggcacaaa caactatgtc tcggtcaaac
    20281 agacctagtc gttctaaaac atcttgttca taatcagcaa tttctatcat cgtgatatca
    20341 tccgacaatt gacgacgatc actcaaatct ttgcgataat ataatgtcac gtcatataac
    20401 tgagatgtta aattttgcgc tataggaatc gttaattgat ttttaccaat taaactaaca
    20461 tcaattttac ggttaaactc atctggaact ggaaacagtt ttttgaaaat aatcggaacg
    20521 aatacacatg taatgactgc gcttaaaatt aatatacctg acgtttcagc tgaaatagca
    20581 tttaatcttt ctgaaatttt ggctgcagct atcacgagcg ataatgttga tgttaataaa
    20641 aatgctgatg caatcgttgt tttcatatca aaccaacgtc gaataaacat gactggaatt
    20701 aattttgaaa tgataaatgc aacgattaaa atcggtatga taattagtaa tttcggttct
    20761 ttaattaatg aaggtatgtt taaatctaca ccaaccatta taaagaaaat aggaataaag
    20821 aacccataac caaatgagtc taacttttca accatttctt catctggatt taataatgaa
    20881 acaacgacac ctgctaagaa tgcacctaat atattttctg cgccaactcc ctctgctagg
    20941 gctactaata atattattaa tgcaaacacc gcacgaatac cgatttgcgt cgtaccatcc
    21001 atcaattttt gtaaaaatga cattctttta aattgaacac ctaaaatata tgaaattgct
    21061 gtgaaaacaa ctaatatacc tattaaccat attgtactgc cgccttgacc attgattgca
    21121 ccatagaccg ttaataaaat catagttact aagtccgcaa gtactgctac taataggatg
    21181 aattgaccta tagttgttct cataatattc atttctttta aagttggaac aactacgcct
    21241 aaggaaatag ttgaaatgat aatgaccatt aataacacat catccactaa tccaagccat
    21301 ttaaatacat acgctaacag aatcgaaata atcataataa atgcaaatac agttaacgct
    21361 agattaagat gccctggaat tgaggattca tcatcatttt gtccttgacg tgcgcgttta
    21421 tcttttttaa aagctttaaa atcaatttct aaaccactta aaaacattaa aaagataaag
    21481 cctaacgttg ataaaatatt tagaattgaa tccctttcta ctatatttag aaatgaattt
    21541 ccaatcacaa tccccatcaa aatttctgca acaacaactg gcaagaaatt aatatttaat
    21601 cgattgacaa ttattggagt taaaaacgct gctaaaacaa caataactaa agataaaaac
    21661 tccataactc ctccttaaat taagtaagcc ataaatgatg tagctaaacc aaaataaatc
    21721 aacatactaa taatatcatt aattgttgta ataaatggtc cactagccac tgctggatcg
    21781 atatttaatt tattcatcaa taatggaatc atcgaaccta caaacgtccc caccgtcatc
    21841 gcacaagtta aacttcctgc aacgattaat gctaaaagtg gctgatgata tattgcaaca
    21901 ataattgtaa ataatattgt tgaacataca acacccgata atacaccact tcccgcttct
    21961 cttaatgcaa ttctaaattt actttgctca ttaatttccc ctgtcgtaat gttacgaact
    22021 gaaacggcta aagattgtgt acctgaattt cctgacatac cactaataat aggaataaac
    22081 gctgcgagta gcgctacatt ttctaatgtt ttttcgaatc tccctaaaat tgtcgcagta
    22141 atcattccta aaaatgttaa aataatcaac catggtaaac gttttaatgc tgttttaatg
    22201 attgaatcat tagtcgaatc gatatctgaa accccggcta aacgagagta gtcttcacta
    22261 gcctcttcat ccataacgtc taaaatatca tcaatcgtga tgataccaag caaatgttct
    22321 tggtaatcta taacaggtac agccatgaaa tcatagtctc tcataacttg agcaacatct
    22381 tcttggtcgt ctgctacatt cacactaatg acacgttcat tcataatatc ttcaatataa
    22441 gcatcatttt cagctacaat taaatctctt agtgataaaa cacctactaa tttaccatca
    22501 tcatcaacga caaatataac atatattgtt tctgcgtctg gcgcttgcgc tttgaccaat
    22561 aataacgctt ctttaacagg cgtatgcgct ttaagtgata aatactccgt cgtcataata
    22621 ccgccggccg tatcctcatc atagtgaagt aatgctttga tttcattcgc gtcatcttta
    22681 ttcatcaatg ttaaaagact agcaactttt ggtttagtca actcatttaa aatatctact
    22741 gcattgtcgt atgacatttc ttctaatatg tgacttgcgt atgtcgcatt cattttatca
    22801 aatagcaact catattcatc gtcatcaata tctaattgat caaagaaatt tgcaacttct
    22861 tcaggtgata aatattgaaa aatcttttgt ctattttcgt cggtagtatc ttcaaaatac
    22921 tcactttgtt catatgtgtg taatgctaga aattcatctc taaattgatc aatatcatca
    22981 ttttctaagt attgatctaa taaagtttgg tcgtataatt cctcttgaac acgctctttt
    23041 tcatctgtgt tcattgacat acttacaccc cctgtgtgaa ttagagttga ttgaataatt
    23101 taagtaattg cttataatca attgtaatat aaatattgtt cttattgatt ggatgaacaa
    23161 aatatatttg cgtacattgc agtacttgac catgaatttt gtcatgaaaa ccatcataca
    23221 aagaatctcc cacaattgga tgcccaatat gttgaaaatg tacacgaatt tgatgtgtac
    23281 gtcccgtatg caaatgaact ttgcataaac tgtatttatc attctgattt attacttcat
    23341 aagatgtttt agcgtattta ccatccgagg caacttctct agttataata ctatcctttg
    23401 accgtctaat attagcttca ataataccag atgtatgggt tttaccatat acaaggcaag
    23461 tatatatttt tttcaagttt actttagaaa ataaatgatg gatatgtcca tatttagcga
    23521 atatcacaat accagtagta ttacgatcta gacgcgtaac aatatgtggg ttaatatttt
    23581 caccatgttc ctgacaatga tatagtactt gttcgattaa actttcatga ggatgttctc
    23641 tcgaaggcgt acaattttga ttgtttggtt tagtaactat gatgataaaa gcatcttcat
    23701 acaatacttc tagcttacga gcataaggta ttaaattaac actcggtatt tctcgtggta
    23761 aatgaatttc taatatatca tttggcatta attgcttacg cactgtgact ggttcatcat
    23821 taacaattaa agcgccatta tttttaatgg cgctcactgt cttcttagaa aaatcatgtc
    23881 gtgctaaaaa agttttaaca gtttcttgtt gtgatatatg atacttaaat ttcatcgttc
    23941 ttcatcactt gatatgaaag aatcgtgtac acgtttccag aatgggaatg gtctaaaacg
    24001 tgcaaacctc actttttcat ttgctacacg gtattgtatt gaattaacat ttttatgttt
    24061 gatactaaca tgatctatcg tcattctaat ggtatcatga ttaactggtg atattaaaca
    24121 tgtatgatgc tttggtaata caagtggtga tcctaccgtt ctaaacacac gattatttat
    24181 tgaggcaatt tctgtaattt gcattgcttc aagtgaagga tgtatcagtg cgccacctag
    24241 cgctttgtta taagccgttg aacccgaagg tgttgataca cataatccat cgcctctaaa
    24301 tcgctcaaag tgtttccctc ttaagttaac atccacaaca agtgttgagc cattttcagt
    24361 tttcatcgtt gcttcattta atgctaaata ccttgtttca tatccgttgt cgttgtatct
    24421 cataataatt tcaagcaatg gatattcaat gacctgaaac tctgaattat taatttcgat
    24481 gattaatttt tcaacttcat gaggtaacca atccgcataa aatcctaaat gacctgtatg
    24541 aaccccaaca aatgccactt ttgataacat gtggctatac tgatggaatg cttgtagtaa
    24601 tgtaccatca ccaccaactg aaataacaat ttcaggattt tcactatcct caatcatgcg
    24661 aaaatctttc atatagttca tcattttatg ctttaaggca ttagacttgg agtcaccttt
    24721 agttaaaatt gtataacgca tgatttataa cacctcgtta atcattttca tgttttttag
    24781 aacgtttttg cgtgtaatat ttttgagctt cctgaatttc atctttaatt tcagacatct
    24841 cttcatcaag taaatacgct gcttctgccg ctctttccaa acgatgttga atttcatccg
    24901 gataagcacc atcatattta tatcgtaaag tatgttcaat cgttgcccag aaattcattg
    24961 ctaatgtacg aatctgaatc tcagccaata taaatttttg gccttgtaat gtttcaattg
    25021 gatattcaat aatgacatga tacgagcggt aaccactttc tttagtgtta cgaatataat
    25081 ctcgttcttc aattacctta aaatcttttc tttgtcttaa aatattgacg acaacatcaa
    25141 tatcttctac aaattggcac atcattctta aaccagcgat atcgtacatt tcttctctta
    25201 acctatcaaa tggtatttgt cgtttgtttg ccttatctat aatactagcg attggtttaa
    25261 cacgaccagt aacaaattct attggcgagg cttgttcacc aacttcatat tgtttgcgca
    25321 tgcctttaag tttcactttt aactcatcaa ccgcttgctt ataaggtgtt aagaactgat
    25381 cccattgatt catagtgctt caccccgctt tattcaatgt cgaatgtttc ttcaacggtt
    25441 gcaacaaatt ccttaccata attattattt ccttttatgt tgtctaaaat ataagtaagt
    25501 tcttggtgga attcagtcaa ttctagttca tcattgataa taattttttt agtcatgttt
    25561 tcatgcaaca tcgtccatgt ttcttgtacg aaaatgagat aagcatacgc tttaccatca
    25621 tctaatgtat acgcaaaggc ataattatca ctatcaacga gcatttgtcc tacttcagat
    25681 aatcctttaa tagaatcttc tgtataacaa taaagtatgt catctttaat tttaatttca
    25741 ttaatatata aacgcatgct taatcctcct cttattccat aacattttaa cacaattcaa
    25801 taatacaaaa cacttacgaa cactattttt aatggtcaaa ttaacattga taatagataa
    25861 aggaaattac ttttaaaatt caactttgtc attcataata tagttaagat aaattgaatt
    25921 tgatacgagg tgtatacata tcatggcaac aaatcatgaa atagaattta aacaaatgat
    25981 aactgcatca atctataata aattgcaaga gaaatatttt aaagacagtg tgctgtttaa
    26041 gcaagtcaat tactatattg atacacccga tttcaaatta aaggaacatc gctctgcact
    26101 acgcataaga gttaaagaca atcaatatga aatgacttta aagacaccag caaaggttgg
    26161 tctattagaa tacaactata tcgtcgacat taaaccagag atgaacttga ttatttcaaa
    26221 cgacaatctt ccagatgaca ttcgtcaaat tatagttgaa cagtttggtg taaaggatac
    26281 aactttatca atacttggtg cattaacgac atatcgccaa gaaactaaat ataaaggtga
    26341 tttactcgtt ttagataaaa gtgagtattt cgatactacg gattatgagt tagagttcga
    26401 agttaaagac tataatcaag gtttacaaaa gttccaatct ttattacacg aactaaacct
    26461 cgaacatcat caacctttaa ataaacttca acgttttttc aagaaaaaag aaacactttc
    26521 aaacaatata aattaaattg gcaaatatgc atatttcttt caaatgttta aaatcatgtt
    26581 atattagtta tatattaact taagttcgta acagtaaatt tttgaaaatg ggtgattaaa
    26641 tgacaacaac accatatgac atcattggta aagaagcgtt atacgatatg attgattatt
    26701 tttacaccct tgtagaaaaa gatgaacgac ttaatcacct gtttccagga gattttgcag
    26761 aaacaagtcg taaacaaaaa caatttttaa cacagttttt gggcggtcca aacatttata
    26821 ccgaagaaca cggacatcct atgctaagaa aaagacatat ggattttaca atcactgaat
    26881 ttgaaagaga tgcatggtta gaaaatatgc agacagcaat taatcgcgct gcgtttccac
    26941 aaggtgttgg agattattta tttgagcgct taagattaac tgctaatcat atggtgaatt
    27001 cctaaaatta attgtaggtg aataaacatg gctggagaat tacgaataat ggaaaataag
    27061 agtcgtgaag atattaatct atcacctgta agtaaaatcg aaatttattc atttttcgat
    27121 ccatttagct ccgattgctt caaattatca gcaatcttat ccaaattaag aattgaatat
    27181 aatcaatata tacgtatcag acatatatta aatccttcgt taaaagtatt aacgaaatgc
    27241 caagctcaaa gtacatccaa ctttgataac atcgccctag cttataaagc agctgagtta
    27301 caaggtcgtg tacgtgccga acgatttata catttaatgc aaaatgaaat catacctaaa
    27361 agagatatta ttacagaatc aatgatttgt gactgtattc aaaatgcagg tattgattta
    27421 gaagtattta aagacgactt acaaaaaagt aaactaaccg aaagcttgaa aattgatttg
    27481 catattgcaa gagaaatgga aatcgaacaa gccccttctc tcgttttctt tagtgaagat
    27541 gttcatgaag aaggtttaaa agtcgaagga ttatacccat atcacatcta tacttatata
    27601 attaatgaat tgatgggtaa acctatcgaa aagaatcttc ctcctaaatt agaaacttat
    27661 atacagcaac aacaacttgt aacgatggaa gaattactta ctatttatga atggccagaa
    27721 aaacttttaa acaaagagtt aaagaagtta gccattcaac aaaaaattga aaaacttaaa
    27781 tatccagatg gcgatttctg gaaatctaaa atgcctaaaa tcaaatcaaa ataaataaat
    27841 taaagacctc gtacaccata aatgtaacga ggtcttttta ctgactctta attttgcaac
    27901 attaaattat tagaacgtaa tgttacacat cgatctaaat atattagtga tatttttcga
    27961 atttaaccag ttcgaaaatt atacaaatta taaatttggt acataataga cttatattaa
    28021 tcgttaatgt ataaaaagtg catatttaat acatttttat acaacttcac ttccctctta
    28081 ttaaaaaaga acataaaaaa acgtcgtgtc tgaatacacg acgctaaaca aaggggatgg
    28141 gagaaatttt tcacttcaaa caaaggggta tgtttgttat gtgattaatt tcatgttcat
    28201 aatataacat gctatctcta ccatttcaac cttttaatag tacttaattt aaattgtcac
    28261 aatctgttca taatgtaagc gaattcaata gtactaagct ttcattaatt tttcaaaagc
    28321 gttcaatttt tgttcaaaaa cttcacaagc ttgttcaatt ggttcaggtg ttgtcatatc
    28381 tacaccagca ttttttaata tctcaattgg ataatttgag ctaccttttt tcaagaattc
    28441 attaatatat ctatctactg ctggcttacc ttctgttaaa atttgatgac ttaagctttg
    28501 agctgcactg taaccagttg cgtattgata tacataataa ttcatataga agtgtggaat
    28561 acgtgaccat tccttactaa tatcttcatc agtttctaca gaatcaccga agtataattt
    28621 atttaatttg gcatattctt cattcattct agttggcgtt aatggttcac ctgcttcttc
    28681 aattgcatga attttatgct caaattctgc gaacattgtt tgtcggaata atgtagctct
    28741 gaaacgttct aattcttggt ttaataataa taagcgtttt tcatcatcaa gatgtttatc
    28801 catataatca cttaaaagtg cttcgttaca agttgatgca acttcagcga caaaaatagt
    28861 gtagtcacta gaatttgacg gttggaattt tctactgaag taactatgtg ctgaatgccc
    28921 aaattcatga actaatgtgt ataagtctga aatagtatta gaccagttaa gtagaataaa
    28981 tggattagtt aaatgtgcac ctgatgaata gccacctgaa cgtttacctt tattctcata
    29041 gacatcgacc caacgattgt ttaagccttc tttaactaca tttaaatatt cttcacccat
    29101 tggttctaat gcttttaaca tccactcttt agcttcttca taaggcattt caaacttaat
    29161 atctttaatt aatggtgtat ataaatcata cattttcaag tcatctaaac ctagcaattc
    29221 tttgcgcaat tcagtatatc tatgtagcaa tggtaaatat ttatgtacag tttttactag
    29281 attgtcatat acattttctg gaatatgatt attactcaat gctttttctc ttgcagtttt
    29341 gtaattgtgt gtacgagcat taaatacatt tttcttcact tcacctgcta gtgtagcgcc
    29401 aagcgtatta ttatgagcac catatgcttt atatacattt ctaaaagcac tttctcttag
    29461 tttgcgatca tctgattcta aatacttaat aaatgtacct tgtgttaacg ggtgtgcatt
    29521 tccatcttta tcaatcgcat cttcaaatac taaatcagcg ttgctaaaca taccgtatac
    29581 atttgatggc gttgataacg cgtcctgcgc ttctgttaat aacttttcag tttcagcatc
    29641 taaaatatga ggacgttttt cattaatcaa cttcaaatca aatgcgaatt tttgtaattt
    29701 atcatatgaa tttacaaatg attgaatttt atcttcatca atttgtaaaa tctctggcac
    29761 taagaaactc catgccgagc taaatttaat aattaattga tgtgctcttg actccatacc
    29821 agtatacttg tcgttcgttg tatcttggtc ttgttttagg tgcgcgtata catatacttt
    29881 ttctaattta gtacctaatg tatcttctaa ttctaacgca ttgtataatg tctcagcact
    29941 atcaccaatg tgtcctttaa attgttcttc tttgcctaac tcattttcaa cttctttaaa
    30001 tgcagcctca aaagcttcat catctttgaa aattgttgtt aagtcccatg tatattcagg
    30061 atatttacgt tcctgttctt ctctcgataa ttgttgactc atatgtagta aacctcctaa
    30121 taaaatataa ttgatataat tttctcattt tagaacaaaa tttgcacgtc attacctcta
    30181 tctgaacaaa tatttaaata attgttaata agtttttcta taattgctgt tttactttct
    30241 agagcaacaa taaatttttt cagtttaaaa taattaaggt tgtcatttac taatt
//
LOCUS       DAKPJH010000023        30237 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.023, whole genome shotgun sequence.
ACCESSION   DAKPJH010000023 DAKPJH010000000
VERSION     DAKPJH010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30237
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.023"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            197..1543
                     /locus_tag="OY092_000854"
     CDS             197..1543
                     /locus_tag="OY092_000854"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HCX1075817.1"
                     /translation="MHFIAISINHRTADVALREQVAFRDDALRIAHEDLYETKSILEN
                     VILSTCNRTEVYAVVDQIHTGRYYIQRFLARAFGFEVDDIKAMSEVKVGDEAVEHLLR
                     VTSGLDSIVLGETQILGQIRDAFFLAQSTGTTGTIFNHLFKQAITFAKRAHNETDIAD
                     NAVSVSYAAVELAKKVFGKLKSKQAIIIGAGEMSELSLLNLLGSGITDITVVNRTIEN
                     AMKLAAKHQVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERIAENRKQDSLVL
                     IDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNE
                     WISMLGVVPVIRALREKAMTIQAETMDSIDRKLPGLSERERKIISKHTKSIINQMLKD
                     PIKQAKELSSDKKSNEKLELFQNIFDIEAECPHEQAKQQKESKVKEISARRIFSFE"
     gene            1565..2380
                     /gene="ccsA"
                     /locus_tag="OY092_000855"
     CDS             1565..2380
                     /gene="ccsA"
                     /locus_tag="OY092_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HCX1075818.1"
                     /translation="MQENLFIRFNEIILLIYLISIICYFYDFVQKSHKIRSLGIYLLG
                     IVWVLQTISLSIFIIQTRHIPLGSISDVFYTLSWLIISISLILNLIKVLNFSVFFLNL
                     IGLTLLGMNTFQPTHYTNKVQKIAVVDELLLVHIGLAVLSYVFFALAFVNALLYIMQY
                     RNLKEKRFDQKYFRIGSVATLESIVFYSTLSGWIILIFSIILGTQWGVISVGERIFID
                     PKVILSSIITVLYGSYILLRINKWLNSRYLIYYNIILFCLNMINLFFATHFVN"
     gene            2422..3348
                     /gene="hemC"
                     /locus_tag="OY092_000856"
     CDS             2422..3348
                     /gene="hemC"
                     /locus_tag="OY092_000856"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HCX1075819.1"
                     /translation="MRKLVVGSRRSKLALTQSQQFIDKLKAVEPNLEIEIKEIVTKGD
                     RIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELP
                     FDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTE
                     DYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKV
                     HNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTM
                     NGTDPVELGKTVSNKLKEQGAYEIIKRLNEQH"
     gene            3370..4038
                     /locus_tag="OY092_000857"
     CDS             3370..4038
                     /locus_tag="OY092_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HCX1075820.1"
                     /translation="MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDW
                     LVFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSF
                     NQTNQKILLPSSELARPLLLAALSKNNEVVKIDLYTSVPNKQNIQDVKKMIEHQQIDA
                     LTFSSSSAVRYYFNEGFVPKFKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKIL
                     ESRG"
     gene            4041..5015
                     /gene="hemB"
                     /locus_tag="OY092_000858"
     CDS             4041..5015
                     /gene="hemB"
                     /locus_tag="OY092_000858"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001633925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HCX1075821.1"
                     /translation="MKFDRHRRLRSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKE
                     IKSLPGVYQISLNLLESELKEAYDLGIRAIMFFGVPNSKDDIGTGAYIHDGVIQQATR
                     IAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTAISQVEAGAD
                     IIAPSNMMDGFVAEIRRGLDEAGYYNIPIMSYGVKYASSFFGPFRDAADSAPSFGDRK
                     TYQMDPANRLEALRELESDLKEGCDMMIVKPALSYLDIVRDVKNHTNVPVVAYNVSGE
                     YSMTKAAAQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK"
     gene            5063..6349
                     /gene="hemL"
                     /locus_tag="OY092_000859"
     CDS             5063..6349
                     /gene="hemL"
                     /locus_tag="OY092_000859"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HCX1075822.1"
                     /translation="MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGS
                     KIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVI
                     DRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA
                     TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGDDIAGVIVEPVAGNMGVVPPI
                     EGFLQGLRDITTEYGALLIFDEVMTGFRVGYHCAQGHFGVTPDLTCLGKVIGGGLPVG
                     AFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPETYEYFNMLGDILED
                     GLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVF
                     LPPSQFEGTFLSTAHTKEDIEKTIQAFDTALSRIVK"
     gene            6410..6511
                     /locus_tag="OY092_000860"
     CDS             6410..6511
                     /locus_tag="OY092_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075823.1"
                     /translation="MGGDLIVKVHICFVVKTASGYCYLNKREAQAAI"
     gene            6545..7618
                     /locus_tag="OY092_000861"
     CDS             6545..7618
                     /locus_tag="OY092_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCX1075824.1"
                     /translation="MTMIYRNNFIVFVLSFFISIILYSSHVLLPFMFGPIIASIICVK
                     VFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKDNWLSIIVVSISILLIALVMA
                     FIFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPF
                     ISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAP
                     LIVLIVWNFSTDLTFTLDHWLLNMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIM
                     LIIGALIMVYVIHFFDNNPINELFLGAAPGGVNQIVLVALATGADVAMITSYHIFRIF
                     FILFIIAPGINYFLKYRSNKRED"
     gene            complement(7841..8401)
                     /locus_tag="OY092_000862"
     CDS             complement(7841..8401)
                     /locus_tag="OY092_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HCX1075825.1"
                     /translation="MNDCAFGTKDPVYLDYHDYVWGQPLYDSKALFKLLALESQHAGL
                     SWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGY
                     LKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPV
                     TVFSFLEAAGLYDAHLKDCPSKPKHN"
     misc_binding    8459..8760
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            8805..11435
                     /locus_tag="OY092_000863"
     CDS             8805..11435
                     /locus_tag="OY092_000863"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HCX1075826.1"
                     /translation="MEMKPKYDPREVEAGRYEEWVKNGYFKPSEDKSKETYTIVIPPP
                     NVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLNEQGIT
                     RYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFVD
                     LYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGAFYHFKYPYADGEGFIEIATTR
                     PETMLGDTAIVVNPNDERYKDVIGKTVILPIVGRELPILADEYVDIDFGSGAMKVTPA
                     HDPNDFEIGQRHQLENIIVMDENGKMNDKAGKYEGMDRFDCRKQLVEDLKEQDLVIKI
                     EDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFN
                     QWMENIRDWTISRQLWWGHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSS
                     ALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVL
                     LHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVES
                     VWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDK
                     YEFGEVGRALYNFIWDDFCDWYIEMSKIPMNGNDEEQKQVTRSVLSYTLDNIMRMLHP
                     FMPFVTEKIWQSLPHEGDTIVKASWPEVRESLIFEESKQTMQQLVEIIKSVRQSRVEV
                     NTPLSKEIPILIQAKDKEIETTLSQNKDYLIKFCNPSTLNISTDVEIPEKAMTSVVIA
                     GKVVLPLEGLIDMDKEISRLEKELAKLQSELDRVDKKLSNENFVSKAPEKVINEEKRK
                     KQDYQEKYDGVKARIEQLKA"
     gene            11448..12719
                     /locus_tag="OY092_000864"
     CDS             11448..12719
                     /locus_tag="OY092_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HCX1075827.1"
                     /translation="MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHV
                     GGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRI
                     KPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPV
                     LSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHA
                     KPIELDREIVVVSQNDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGL
                     IELDFNKMIDGIESVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVD
                     ILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVE
                     FIKNYQGDTLVITGSLYFISEVKSKLDFEAL"
     gene            12989..13696
                     /locus_tag="OY092_000865"
     CDS             12989..13696
                     /locus_tag="OY092_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HCX1075828.1"
                     /translation="MVVLLSYSCSCIFSFLYQFISIEETSFDYLHRRSKCDYCNSSLK
                     WYELMPIISFLLLKGRCRNCRKRISLTHFLGETFAIIPIVFIKYDFTYVNATLFITTY
                     VFLLIFTMTDITSLMLDCRLIIIYCIVSLSLSMIYPVAFIIISMTTHIFYFLFRAYIG
                     YGDVLLISALSLFFPLQFTIYVILFTFVIAGLVALITMIFKPIKLLPLVPFIFISFFI
                     NSLFYNDIHQFLGGVYF"
     gene            13693..14379
                     /gene="radC"
                     /locus_tag="OY092_000866"
     CDS             13693..14379
                     /gene="radC"
                     /locus_tag="OY092_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000692885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HCX1075829.1"
                     /translation="MKIKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSI
                     DISNELLKSASNLNELKKSSINDLIQVKGIGLQKAITLKAAFELGERMGRRAENNRIK
                     ITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSI
                     AVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSL
                     VEAGYFDEND"
     gene            14447..14731
                     /locus_tag="OY092_000867"
     CDS             14447..14731
                     /locus_tag="OY092_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075830.1"
                     /translation="MTLFIIIGVLVPMVYTMQLNIKNEPVTKRNLLITLALSTLGILV
                     TALAGVIVTKQAFPLLSVAIGSIFTGIVWGLLLSGSYALIRFLSNAFGRK"
     gene            complement(14848..15045)
                     /locus_tag="OY092_000868"
     CDS             complement(14848..15045)
                     /locus_tag="OY092_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075831.1"
                     /translation="MSILTIILIALLVILLFRVGLSILRFLIYVGLVLLCIYLGYQGL
                     IWLLDFFQINSGFLPHFQFNN"
     gene            15205..15678
                     /locus_tag="OY092_000869"
     CDS             15205..15678
                     /locus_tag="OY092_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4930 family protein"
                     /protein_id="HCX1075832.1"
                     /translation="MRLIFSMIKNIIAVIAIVIIVYIALKYAPFLKEQDWNPVNHDND
                     QMNQVTQPTNDAQHVYVSGEKYSLKENDLIKNVPLSQIKNVFKMIDKQEFMAVSGMNR
                     MAYNDQYIIGQRGDEFILYKFGDESMRVYNTEFEMQQDLNELGQNLQLKPENAYQ"
     gene            15752..15871
                     /locus_tag="OY092_000870"
     CDS             15752..15871
                     /locus_tag="OY092_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075833.1"
                     /translation="MAEQSKQKQANEQQKAQNLFARWRQLQNSNSESSNDTNK"
     gene            16071..16913
                     /gene="mreC"
                     /locus_tag="OY092_000871"
     CDS             16071..16913
                     /gene="mreC"
                     /locus_tag="OY092_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HCX1075834.1"
                     /translation="MLKFFKNNKLIVVLCAIIVFIALIGLSIRSQSQSPPEQYIGDSV
                     SFGQRVVSYPVNFVAGTIGDFFKKGDSKESKNKISQLESKNQQLEAENEKLKKELDLK
                     DISKFDPISTTVLARNPDQWMNTIVIDKGSKLGITSNMAVMTSKGFVGRVTKVNKFSS
                     QVDLISTNTRAGKLSVNIQHGSKNIFGLIDRYDEKNSELVISDINNRDNISKGDKVVT
                     SGLADQLPSDLYIGEVTKVQNDQYGLAKEVRIKTGADLTDLSHVYVAKRDPKTIPDDE
                     SRDK"
     gene            16913..17443
                     /gene="mreD"
                     /locus_tag="OY092_000872"
     CDS             16913..17443
                     /gene="mreD"
                     /locus_tag="OY092_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HCX1075835.1"
                     /translation="MRTLYYFLIGILLFYIDTAIGLLIPMNIGKFELVFVPHLTFMYI
                     LMMVVYRGFGVSLLLSIFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSM
                     LFIIILASTLLLEVYVALIYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIK
                     FLKKTNNDIDMKRRQW"
     misc_feature    17470..17666
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            17679..17987
                     /gene="rplU"
                     /locus_tag="OY092_000873"
     CDS             17679..17987
                     /gene="rplU"
                     /locus_tag="OY092_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HCX1075836.1"
                     /translation="MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGD
                     SVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
                     "
     gene            17993..18313
                     /locus_tag="OY092_000874"
     CDS             17993..18313
                     /locus_tag="OY092_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HCX1075837.1"
                     /translation="MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGS
                     VNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIR
                     LNYK"
     gene            18325..18609
                     /gene="rpmA"
                     /locus_tag="OY092_000875"
     CDS             18325..18609
                     /gene="rpmA"
                     /locus_tag="OY092_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009382703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HCX1075838.1"
                     /translation="MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSI
                     LYRQRGTKIYPGENVGRGGDDTLFAKIDGVVKFERKGRDKKQVSVYAVAE"
     gene            18829..20121
                     /gene="obgE"
                     /locus_tag="OY092_000876"
     CDS             18829..20121
                     /gene="obgE"
                     /locus_tag="OY092_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HCX1075839.1"
                     /translation="MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASV
                     VFEVDEGLRTLLDFRYQRHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDE
                     VLADLVEDGQRAVVAKGGRGGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLAD
                     VGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIE
                     GASDGVGLGHQFLRHVERTKVIVHMIDMSGSEGREPIEDYKVINQELAAYEQRLEDRP
                     QIVVANKMDLPESQDNLNLFKEEIGEDVPVIPVSTITRDNIDQLLYAIADKLEEYKDV
                     DFTVEEEESVGINRVLYKHTPSQDKFTISRDDDGAYVVSGNAIERMFKMTDFNSDPAV
                     RRFARQMRSMGIDDALRERGCKNGDIVRILGGEFEFVE"
     gene            20134..20589
                     /locus_tag="OY092_000877"
     CDS             20134..20589
                     /locus_tag="OY092_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HCX1075840.1"
                     /translation="MDNKDYKKFYLIREDVLPESVVKTLKIKDALKSDPTLSIYDAVK
                     QFDLSRSAFYKYRETIFPVDDKMLDHREFTLILYVTDIVGMLARVLDVISKLELSVLT
                     IHQSIPMEEKATITLSLNAKSKETAVEDVIGALRNLDYVSKVELISMSM"
     gene            20603..21205
                     /gene="ruvA"
                     /locus_tag="OY092_000878"
     CDS             20603..21205
                     /gene="ruvA"
                     /locus_tag="OY092_000878"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HCX1075841.1"
                     /translation="MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKQLDHEV
                     LIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIE
                     NENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
                     ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS"
     gene            21237..22241
                     /gene="ruvB"
                     /locus_tag="OY092_000879"
     CDS             21237..22241
                     /gene="ruvB"
                     /locus_tag="OY092_000879"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HCX1075842.1"
                     /translation="MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIK
                     AAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGL
                     QPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATT
                     RAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTP
                     RVANRLLKRVRDFQQVNEDEQIYIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNG
                     GPVGLDTIAVTIGEERITIEDVYEPFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
                     "
     gene            22243..23268
                     /gene="queA"
                     /locus_tag="OY092_000880"
     CDS             22243..23268
                     /gene="queA"
                     /locus_tag="OY092_000880"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HCX1075843.1"
                     /translation="MNFEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKHLHFK
                     DIIEYFRPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTQIEGNDWEVLLKPAKRI
                     KVGNKLNFGNGKIIAECIKEMDQGGRIMRLHYEGILQERLDELGEMPLPPYIKERLDD
                     PDRYQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDD
                     VNDHEMHSEYYQMTQETADLLNDTESKGHRIISVGTTSTRTLETIRRDHDKFVETSGW
                     TNIFIYPGFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSF
                     GDAMLII"
     gene            23291..24430
                     /gene="tgt"
                     /locus_tag="OY092_000881"
     CDS             23291..24430
                     /gene="tgt"
                     /locus_tag="OY092_000881"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HCX1075844.1"
                     /translation="MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVK
                     TMSPEELRQIEAKIILGNTYHLWLQPGNDIIKHAGGLHKFMNWDGPILTDSGGFQVFS
                     LSNLRKITEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYDYV
                     KKSIERTTRWAKRCLDAHQRPEDQALFGIIQGGEYEDLREQSAKDLVELDFPGYAIGG
                     LSVGEPKPVMYKMVEHTEQFMPKDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIA
                     RNGTCMTSQGRLVIKNAKFADDLRPLDENCDCYTCQNYSRAYIRHLIKAEETFGIRLT
                     TIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF"
     gene            24449..24709
                     /gene="yajC"
                     /locus_tag="OY092_000882"
     CDS             24449..24709
                     /gene="yajC"
                     /locus_tag="OY092_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HCX1075845.1"
                     /translation="MQFSLLIYIVVIFAVMYFLMIRPQQKRAKQHRELINNIQSGQRI
                     TTIGGIKGTVKAVDETTVVITVNGHGTELTFEKPAIKQVDPS"
     gene            24984..27263
                     /gene="secDF"
                     /locus_tag="OY092_000883"
     CDS             24984..27263
                     /gene="secDF"
                     /locus_tag="OY092_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500252.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HCX1075846.1"
                     /translation="MKKSSRIIAFLLLVVLLFAGMAATYKSVIKNVNLGLDLQGGFEV
                     LYQVDPLNKGDKIDKKALQSTAQTLENRVNVLGVSEPKIQVEEPNRIRVQLAGVTDQN
                     EARKILSSQANLTIRDAEDKVKLSGSDIKQGSAKQEFKQETNQPTVTFKVKDKNKFKK
                     VTEEISKKRDNVMVVWLDFKKGDSYKKEAQKKNPKFISAASVDQPINSDSVEISGGFK
                     GQEGVKKAKQIAELLNAGSLPVDLKEIYSNSVGAQFGQDALDKTVFASFIGVALIYLF
                     MLGFYRLPGLVAIIALTTYIYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYE
                     RIKDELRIGRTIKQAFSKANKSSFLTIFDSNLTTVIAAAVLFFFGESSVKGFATMLLL
                     GILMIFVTAVFLSRFLLSLLVSSNIFKNQFWLFGVKKNKRHDINEGVDVHDLKTSFEK
                     WNFVKLAKPLIGVSILIVVVGLVILYIFKLNLGIDFSSGTRVDFQSKQAITQQKVEQV
                     VKDSGLKADQIQINGKDNKVATVQFKDDLTRAQDNKLSDNIKSKFGDTPQINTVSPII
                     GQELAKNAMLALIYASIGIIIYVSLRFEWRMGLSSVLALLHDVFIIVAIFSLFRIEVD
                     LTFIAAVLTIVGYSINDTIVTFDRVRENLQKVKVITTTEQIDDIVNRSIRQTMTRSIN
                     TVLTVIVVVVAILFFGAPTIFNFTLALFIGLISGVFSSIFIAVPLWGIMKKRQLKKSP
                     KHKLVVYKEKKSNDEKILV"
     gene            27466..29739
                     /gene="recJ"
                     /locus_tag="OY092_000884"
     CDS             27466..29739
                     /gene="recJ"
                     /locus_tag="OY092_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HCX1075847.1"
                     /translation="MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQ
                     TIEAIISDTDINHDALQLSDMTKTIERIKRAIANDEKILVYGDYDADGVTSTTILVTT
                     LQLLGAQVGWHIPNRFTEGYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLG
                     VDVIVTDHHEIGSTLPEAYAIVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFK
                     ALVAIGTIADLVSLTDENRSLVKQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFI
                     IGPRLNAVGRLDDASLACELLMTDDEEEAAFLAEQVEHFNRERKDIVATITEEAMAMA
                     ETKVKKGDLFLLLAKENWHEGVLGIVASKIVETFALPTLILNIDREQNHAKGSARSID
                     QVSMFEILSAHQELIAKFGGHHMAAGMTMDIENIESLAEGLNKWMKELSKTTSLDPVK
                     PVDVLLTENDITIKNIRDMNRLRPFGTDFSRPIFEMDDLSVSSVKAIGQQKNHLKLTL
                     GESNIAALFWQNGHLEPELQDEQPINILGSVQINEWNGNQSPQLIIQDIAMNEQQILD
                     YRSKRKSLPFTENDENIVVLIHPKSDKVNANEYYYGEEIKHQTDKVVLRDLPTSMEDL
                     SNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDIFKKCYKALITKQETNIQKEGMLLCQH
                     LSVKPDTLKFMLKVFLDLKFVTQEDGLIRINQQPDKRSIDSSKVYQLRQQRMDVEKQL
                     LYQDFSEIKNWIKSQLS"
     gene            29761..>30237
                     /locus_tag="OY092_000885"
     CDS             29761..>30237
                     /locus_tag="OY092_000885"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009559512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HCX1075848.1"
                     /translation="MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYA
                     KDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLT
                     MHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKI"
BASE COUNT        10665 a         4132 c         5764 g         9676 t
ORIGIN      
        1 tacaaaaatt ttaaaaataa tgtaagcacg aaacttttaa ttagtacaca attgataaca
       61 tttttcaacg ttcatcattt tgtcaaaaac tcaaaagtaa attagaaaga ttataattta
      121 tttaagcatc gtacttaatt ggattttaaa ttatgttata atatttgtat tgttagtata
      181 tatgggggcg tttcaaatgc attttattgc aattagtata aatcatcgca cagctgatgt
      241 tgcactaaga gagcaagttg cttttagaga tgatgcctta cgaattgccc atgaagattt
      301 atatgaaact aaatctattt tagaaaatgt catattatca acatgtaatc gaactgaagt
      361 atatgctgtt gttgatcaaa ttcacacagg tcgttactat attcaacgat ttctagctcg
      421 tgcatttgga tttgaagtag atgatattaa agcaatgtca gaagtaaaag tgggggacga
      481 agcagtagaa catttattgc gtgtcacttc tggtttagat tcaatcgtac ttggagaaac
      541 tcaaatttta ggtcaaataa gagatgcatt tttcttagcg caaagcacag gtacgacagg
      601 aacaattttt aatcatctat ttaaacaggc aattactttt gcaaaaagag cacataatga
      661 aacagatata gctgataatg ctgtaagtgt gtcttatgct gcggtcgagt tggcgaaaaa
      721 agtatttggc aaattgaaaa gtaagcaagc tatcattatt ggtgcagggg aaatgagtga
      781 attatcacta ttaaatcttc ttggttctgg aattactgat attacagtag taaatagaac
      841 aattgaaaat gctatgaaat tagcagcaaa gcatcaagtg aaatatgatg aactatcatc
      901 attaccaaat ttacttgaaa gtgcagatat tgtgattagt tcaacgagtg cacaatctta
      961 tatcattaca aatgaaatga tagaaagaat tgcagaaaat agaaagcaag attcactagt
     1021 attgattgat attgcagttc ctcgagatat tgaacctggt attagtgcca tcacaaacat
     1081 ctttaattat gatgttgatg acttaaaagg tttagttgat gcaaacttac gtgagcgaca
     1141 attagcggct gcaacaattt cggaacaaat tcctgcagaa atacatgcac acaatgagtg
     1201 gattagtatg ttgggtgttg ttccagtgat tagagcttta cgtgaaaaag ctatgacaat
     1261 tcaagcagaa acgatggaca gtattgatcg taaattgcca gggttaagcg aaagagaacg
     1321 taaaattata tcaaaacata caaaaagtat catcaatcaa atgttgaaag atcctattaa
     1381 acaggccaaa gaattaagta gtgataagaa aagtaatgaa aaattagagc tatttcaaaa
     1441 tatatttgat atcgaagctg aatgtcctca tgagcaagcg aagcaacaaa aagaaagcaa
     1501 ggtcaaggaa atttcagcac gacgtatctt tagttttgaa taagcatatt aatatggtga
     1561 taatatgcaa gaaaacctgt ttattcgatt caatgaaatt atattattaa tatacttaat
     1621 cagtatcatt tgctattttt atgattttgt ccaaaaaagt cataagatta gaagtttagg
     1681 catatattta ttggggattg tttgggtttt acaaacaatc tctttatcta tttttattat
     1741 acaaactaga catattccat tagggtctat ttcagatgta ttctatactt taagttggct
     1801 gattatttca atctctttaa ttcttaacct tatcaaagtt ttgaatttct cagtgttttt
     1861 cttgaattta atagggctaa cacttttagg gatgaataca tttcaaccga cacattatac
     1921 taataaggtt cagaaaattg ctgttgtaga cgagttactg ttagtccata tcggtctagc
     1981 tgtgttaagt tatgtcttct ttgccttagc ttttgtcaat gcattactgt atatcatgca
     2041 ataccgtaat ttgaaggaaa agcgttttga tcaaaaatac tttagaatag gtagcgttgc
     2101 tacacttgaa tcaattgtgt tttactcaac gttaagtggg tggataattc tcatatttag
     2161 tattatttta ggtacacagt ggggtgtaat ttcagttggt gaacgtatat tcattgaccc
     2221 gaaggtaata ctctcttcaa ttattacagt attatatgga agttatattt tacttagaat
     2281 caacaaatgg ttgaattcaa gatatttaat atactataac attattttat tttgcttaaa
     2341 tatgattaat ttattttttg caacacattt tgtgaattga gaaaataatc tagagcaatc
     2401 cgttcctagg aggaattgaa catgcgtaaa ttagtcgttg gctccagaag aagtaaatta
     2461 gctttaacac aaagccagca atttattgat aaattaaaag ctgtcgagcc aaatctagaa
     2521 attgaaatta aagaaattgt cacgaaaggc gatcgtatag tagataaaca attgtctaaa
     2581 gtcggaggca aaggcttatt tgttaaagaa atacaacatg aactttttga aaaaaatatc
     2641 gatatggcaa tacactcact taaagacgta ccaagtgtaa ttccggaagg tttaacatta
     2701 ggttgtatcc ctgatagaga attacctttt gatgcgtata tttctaaaac acatacacca
     2761 ctatcccaat tgccagaagg cagtattatt ggtactagtt cattacgtcg tggtgcacaa
     2821 atattatcta agtatcctaa tttagagatt aaatggatta gaggtaatat agatacacga
     2881 ttagaaaagt tacaaactga agattatgat gcgattattt tagctgcagc tggtttaaga
     2941 agaatgggct ggtcagatga tattgtaaca tcttatcttg atagagatac attgttacct
     3001 gcaatcggac aaggtgcttt agggatagaa tgtcgtagtg acgatgaaga actattaaca
     3061 ttattaagca aagtacataa tgatgaagtt gcaaaatgtg tgactgctga acgaacgttt
     3121 ttagcagaaa tggatggtag ttgtcaggtg ccaattgcag gatatgctac aatctcagat
     3181 caaaaagaaa tcgaatttac aggtttaatt atgaccccag atggtaaaga acgatttgaa
     3241 tatacaatga acggaacaga tccggttgag ttaggcaaaa cagtgagtaa caaattaaaa
     3301 gagcaaggtg cttatgaaat tataaaacgc ttaaatgaac aacattaaat aatggagtga
     3361 cgtttaaata tgaagccagt tgtagttatg acacaaacaa atgacatgca aagtgattta
     3421 gtatcaatta ttcacaaacc ctttattgat ataaagccac taaattttga tattcatttg
     3481 ttaaatcaac gctatgactg gcttgttttt tcatctaaaa atgctgtgaa attcttttat
     3541 aaatatctaa aaggaattaa tgttgataac attgctgtga taggaagtaa gacagcgcaa
     3601 tattgtgaat cacttggcat tcgagttgat tttatgccaa acgacttttc tcaagaagga
     3661 tttttaaaat catttaatca aactaaccaa aaaatacttt tgccttcgag tgaattggcg
     3721 agaccattgt tattagcagc gttatctaaa aataatgaag ttgttaaaat agatttatat
     3781 acttcagtgc ctaacaaaca aaatatacaa gatgttaaaa aaatgataga acatcaacaa
     3841 atcgatgcat taacattttc aagttcgtcg gcagtacgtt attattttaa tgaaggattt
     3901 gtaccaaaat tcaagtcgta ttttgctatt ggagaacaaa cagcacggac cattaaatca
     3961 tatcaacaac cagtaacaat tgcagaaatt caaacactcg aatcactaat tgaaaagatt
     4021 ttagaaagta ggggctaaaa atgaaatttg atagacatag aagattgaga tcatcagcga
     4081 caatgagaga tatggttaga gagaatcatg taagaaaaga agatttaata tatccaattt
     4141 ttgtagttga aaaagacgat gtgaaaaaag aaattaagtc attgccaggt gtataccaaa
     4201 tcagtttgaa tttacttgaa agtgaattaa aagaagctta tgacttaggc atacgtgcca
     4261 ttatgttttt cggtgttcca aactcaaaag atgatatagg tactggtgca tacattcacg
     4321 atggtgttat tcaacaggcg acacgtattg ctaaaaaaat gtatgatgac ttattaattg
     4381 ttgcagacac ttgtttatgt gaatatactg atcatggtca ttgtggtgtg attgatgacc
     4441 atacacatga cgttgacaat gataaatcat tgccactact tgttaaaaca gcaatttctc
     4501 aagtggaagc tggtgctgat attattgcgc caagtaatat gatggatggt tttgttgctg
     4561 aaattcgtcg tggattagat gaagccggct attacaatat tcctataatg agttatggtg
     4621 tcaagtatgc atcaagtttc tttggacctt ttagagatgc agcagattca gcgccatcat
     4681 ttggggatag aaaaacgtat cagatggacc ctgctaaccg tttggaagca cttcgtgaat
     4741 tagaaagtga tttaaaagaa gggtgcgaca tgatgattgt taaacctgct ctaagttatt
     4801 tagacatagt tcgagatgtt aaaaatcata cgaatgttcc agttgttgca tataatgtga
     4861 gtggagaata tagtatgact aaagcggcgg cacaaaatgg ttggatagat gaagaacgtg
     4921 tcgttatgga acaaatggtt tcaatgaaac gtgcaggtgc tgatatgatt attacgtatt
     4981 ttgcaaagga catttgtcgc tatttagata aataaggttt tatatgtatg attttccata
     5041 aactatagga ggaatttact ttatgagata tacgaaatca gaagaagcaa tgaaggttgc
     5101 tgaaacttta atgcctggtg gtgtaaatag tccagtacgc gcatttaaat cagtagatac
     5161 accagcaatt tttatggatc acggtaaagg ttcaaaaatt tatgatatcg atggtaacga
     5221 gtatatcgac tatgtactaa gttggggacc acttatttta ggacatagag accctcaagt
     5281 tattagtcat ttacatgaag caattgataa aggtacaagt tttggtgcat caacattact
     5341 tgaaaataaa ttggcgcagc tcgttattga ccgagtacct tcaatagaaa aagtgcgtat
     5401 ggtgtcatct ggtacagaag ctacattgga tactttaaga ttagcacgtg gttatactgg
     5461 cagaaataaa attgtgaaat ttgaaggttg ctatcatggt catagtgatt cgttattaat
     5521 caaagctggt tctggggtgg caacattagg attgccggat tctcctggtg tgcctgaagg
     5581 tattgctaaa aatacaatta cagttccata caatgattta gatgcactta aaatcgcttt
     5641 cgaaaaattt ggagacgata ttgctggggt aatcgtagaa cctgttgctg gtaatatggg
     5701 tgtcgtaccg ccgattgaag gttttttaca gggattaaga gatattacga ctgaatacgg
     5761 agcattgcta attttcgatg aagtaatgac tggtttcaga gtcggttatc attgtgcaca
     5821 aggtcacttt ggtgtgacac cagatttaac ttgcttagga aaagttatcg gtggaggact
     5881 acctgtaggt gcttttggtg gtaaaaaaga aatcatggat catatagcac cattaggaaa
     5941 tatttatcaa gcgggtacgt tatcaggaaa tcctcttgca atgacaagtg gttatgaaac
     6001 gttaagccaa ttaacgccag agacatatga gtattttaat atgttaggcg atatacttga
     6061 agacggttta aagcgtgtat ttgctaaaca caatgtacca ataactgtaa atagagcagg
     6121 ttcaatgatt ggttatttct taaatgaagg acctgtaact aattttgaac aagcgaataa
     6181 aagtgatttg aaattatttg cagaaatgta tcgagaaatg gcaaaagaag gtgtgttttt
     6241 accaccatct caatttgaag gtacattctt atctacggca cacacgaaag aagatattga
     6301 aaaaacgatt caagcatttg atacggcttt aagtcgtatt gtaaaataaa tatacggaca
     6361 aattgagagc ctgaactttg ttcaggctct ttttaaatgt atatcagaca tgggcggcga
     6421 cttgatagtg aaagtccata tatgctttgt agtcaaaact gctagcggat attgttatct
     6481 taacaaacgt gaagctcaag cagcaattta gtcattttat tttttattga aagaagtgga
     6541 aaacatgaca atgatatata gaaataattt cattgtgttc gttttatcat tttttattag
     6601 tattatattg tattcatcgc acgtattact cccatttatg tttggtccta ttatcgcatc
     6661 aatcatttgt gtgaaagttt tcaaacttga tattaaatgg ccattcttac ttagtgaatt
     6721 aggtattgta ctattaggtg tgcaaatcgg atcaacgttt acgaaaaatg tcgttatgga
     6781 tattaaagac aattggcttt cgattattgt tgtatctatt tcgatattat taattgcatt
     6841 agtaatggca tttattttta aaaaaattgc acgtattaat acagaaacag ctattttaag
     6901 tgttatacca ggagcactaa cacaaatgct ggtcatggct gaacaagaca aacgtgctaa
     6961 tttgttagtt gttagcttaa cgcaaacatc acgaattata tttgttgttg ttttagtacc
     7021 gttcatttca tatttttttc atgatggtaa catgcatgcg aatggaaagt taacaaaagt
     7081 cttgccttta tcacaagtat taaacatagg gcaaatagtt attttagcga tagctatctt
     7141 tatagtttat ctaattatgt ctaaaataaa gtttccaaca tttcaattat tagcaccact
     7201 cattgtatta attgtttgga atttttctac agatttaaca tttacactag atcattggtt
     7261 gttgaacatg gcacaactaa tatatatgat tagaattgga gttcaaattg cgcatttatt
     7321 gtcagattta aaaggtagac tagcaatcgc aattacaatt caaaatatta tgttgataat
     7381 tggtgcgcta atcatggttt atgttataca tttctttgat aataatccta ttaatgaatt
     7441 gtttcttggt gcagcaccag gaggggttaa tcagatagtt ttagttgcat tagctactgg
     7501 tgccgatgtt gctatgatta cgagttatca tattttccga atctttttca tcctatttat
     7561 tattgcacca ggaattaatt actttttaaa atatcgttcg aataagcgtg aagattagaa
     7621 actatcatcc atttaagttg aattatgctt aggatagaat tcattattaa ggtttaagca
     7681 aaggttgtac atctatattt agattaagat atctaatatt cgcagtgcat taacttggaa
     7741 ctttaactta tgatttgaat aaattttcac atcaaaaaac gagacagtct attagttaaa
     7801 aatagacgat gtctcgttta ttttatgatg ctatagcaaa ttaattgtgt ttaggctttg
     7861 atggacaatc ttttaaatgt gcatcatata aaccggctgc ttctaaaaac gaaaatactg
     7921 ttactggacc taaaaattta aacccgtatt gttttaaatc tttagatagt tgtgttgcag
     7981 tatcatcaac tgtgatacga tcagaagcat gttcatactg caaatcttta ggcttaccat
     8041 ttacatatga ccataaaaat ttactaaaac taccatatgc ttgttcaatt tttaaatacc
     8101 cttgagcttg attaacaatt gcttctaatt ttttacgatg atgaacgata tttggaaaag
     8161 tcattaagcg gtcgatatct tgagcggtca tttgcgctac cttttctggt tcgaaatcat
     8221 aaaatgcttc ttcataggct tctttctttt ttaaaatagt taaccaagat agcccagcat
     8281 gttgtgattc taatgctaaa agtttaaaca atgctttgct atcatagagc ggttgtcccc
     8341 atacataatc atgatagtct aagtagactg gatctttagt tccaaatgcg caatcattca
     8401 ttttattccc acctatacat tgacttattt tgtcaatcat tatactataa gttaagagtt
     8461 taatatatga tttgggaaga gtaagttcaa attattttaa agagagcata tgatttggtg
     8521 tgagtatgta aatgattttt actgaaggta gcccacagag tatcttagct gaacgtgatt
     8581 aatagtaggc taagacgtgt ttgagcgtta atcataatct agagtgcttg aagagatgaa
     8641 gcatttcaaa tttcacgatg atagtattgg tatgattatt ccaattatgt taaaagagtg
     8701 aatttgatat taatcatcct tcttgaatat aggtggtacc acggaatatc cgtcctattt
     8761 gtatatagga tggatatttt ttattttttt aggaggtata gcaaatggaa atgaaaccaa
     8821 aatatgatcc tcgtgaagtt gaagcgggac gttatgaaga atgggtaaag aatggttatt
     8881 ttaaaccgtc agaagataaa tcaaaagaaa catatacaat cgttatcccg ccaccaaatg
     8941 taactggtaa attacattta ggacatgcat gggatacaac tttacaagat atcattacac
     9001 gtatgaaacg tatgcaaggg tacgatacgt tatacttacc aggtatggat catgctggta
     9061 ttgcgacaca ggcaaaggta gaagctaaat taaatgaaca aggaataact agatatgatc
     9121 ttggtcgtga aaagttttta gaacaggcat gggattggaa agaagagtat gcgtcattta
     9181 ttcgtgcgca atgggctaaa ttaggtctag gtttagatta tagtagagaa cgttttactt
     9241 tagatgaagg tttaagtaaa gcagttaaaa aagtttttgt tgatttatac aataaaggaa
     9301 ttatttatcg tggcgaacgt attataaatt gggatcctaa agcacgtaca gctttatctg
     9361 atattgaagt aatacatgaa gatgttcaag gtgcgtttta tcattttaaa tatccttacg
     9421 ctgatggtga aggttttatt gaaattgcaa caacaagacc agaaacgatg ttaggtgata
     9481 cagcgattgt tgttaaccct aatgacgaac gatacaaaga tgtaatcggt aaaactgtta
     9541 tattaccaat cgtaggacgc gaactgccta ttttagcaga tgagtatgtt gatatagact
     9601 tcggttctgg tgctatgaaa gtgacaccag cacatgaccc taatgatttt gaaattggtc
     9661 aaagacatca attagaaaat attatcgtta tggatgaaaa tggtaaaatg aacgacaaag
     9721 ctggtaaata cgaaggtatg gaccgttttg attgtcgtaa acagctagtt gaagatttaa
     9781 aagaacaaga tttagttatc aagattgaag atcatgttca ttctgtaggt cattcagaac
     9841 gatctggcgc tgttgttgaa ccatatttat caacacaatg gtttgtgcgc atggaagact
     9901 tagcgaaacg ttcattagat aaccaaaaaa cagatgatcg tattgatttt tatccgcaac
     9961 gtttcgaaca tacatttaac caatggatgg aaaatattag agactggacg atttcaagac
    10021 aattatggtg gggtcatcaa attccggctt ggtatcataa agaaacaggc gaaatatatg
    10081 ttggagaaga agcgccaact gatattgaaa attggcaaca agatgaagat gtattagata
    10141 cgtggttctc aagtgcttta tggcctttct ctacgttagg ttggcctgat ttagaaagtg
    10201 aagactttaa acgatactac ccaacaaatg ccttagttac aggttacgat attatcttct
    10261 tctgggtagc acgcatgata ttccaaggct tagaatttac agatcgtcgt ccatttaatg
    10321 atgtattatt acacggttta gttcgtgctg aagacgggcg taagatgagt aaatcattag
    10381 gtaatggtgt ggatccaatg gatgttattg acgaatacgg tgctgatagc ttgcgttact
    10441 tcttagcaac gggttcatct ccaggacatg atttaagata ctcaactgaa aaagttgagt
    10501 cagtgtggaa ctttatcaat aaaatctgga atggggcacg tttcagttta atgaatatcg
    10561 gtgaagactt taaagttgaa gatatcgatt taagtggtaa cttatcatta gcagataaat
    10621 ggattctaac acgtttaaat gaaacgattg caacagttac tgatctaagt gacaaatatg
    10681 aattcggcga agttggacgt gcattatata atttcatttg ggatgatttc tgtgattggt
    10741 acattgaaat gagtaaaatt ccaatgaatg gtaatgatga agaacaaaaa caagttacac
    10801 gttcagtatt gagttatact ttagacaata ttatgagaat gctacatcca ttcatgccat
    10861 ttgtaacaga gaaaatatgg caaagtttac cacatgaagg tgacacaatt gttaaagctt
    10921 catggccaga agtgcgtgaa tcattgattt ttgaagaaag taaacaaaca atgcaacaac
    10981 ttgttgaaat cattaaatct gtaagacaat cacgtgtaga agtaaatacg ccattgtcta
    11041 aagaaatacc tattttaatt caagctaaag ataaagaaat tgaaacaact ttatcacaaa
    11101 acaaagatta tttaatcaaa ttctgtaatc ctagtacctt aaatattagc actgacgtgg
    11161 aaattcctga gaaagcaatg acatcagttg taattgcagg taaagtggta ttaccattag
    11221 aagggctaat tgatatggat aaggaaatca gccgtttgga aaaagaatta gctaaacttc
    11281 aaagcgaatt agatagagta gataaaaagc tctctaatga aaactttgta agtaaagcac
    11341 ctgaaaaggt tataaatgaa gaaaaacgta aaaaacaaga ttatcaagaa aaatatgatg
    11401 gtgtgaaggc aagaattgaa caattaaaag cataggagtt agtaacaatg aattacctag
    11461 agagcttgta ttggatacac gaaagaacta aatttggcat caaaccaggt gttaaacgta
    11521 tggaatggat gctagcacaa tttaataatc ctcaaaataa cattaagggt attcatgtag
    11581 gtggcacaaa tggtaaagga tctacagttg cttaccttag aacagcttta gttgaaaatg
    11641 gttatgaagt aggtacattt acgtcgccgt ttattgaaac atttaatgaa cgaattagtc
    11701 taaatggtgt gccaatatca aatgacgcta ttgtagaatt agtatcacgt attaaaccag
    11761 taagtgaaat gatggaacgt gaaacagatt taggtgttgc aactgaattc gaaataatca
    11821 cagcgatgat gtttttatat tttggtgaaa tacatcctgt tgattttgtc attgttgagg
    11881 ctggattggg tataaagaac gattcgacaa atgtctttac accggtttta tcaatcttaa
    11941 ctagtatcgg tctagaccat acagatattt taggtggtac gtatctagat attgctaggg
    12001 ataaaggcgc gattataaag cctaacgttc cagtgatata tgctgttaaa aatgaagatg
    12061 cattaaaata tgttcgtgaa cgcgcaattg aacaacatgc aaagccaatt gaattagata
    12121 gagaaattgt tgttgtatcg caaaatgatg aatttactta ccgttataaa gattatgaat
    12181 tagaaacaat cattttaagt atgttaggtg aacatcagaa acaaaatgct gcattagcca
    12241 taacagctct tattgaatta aatgaacaag gattaattga attagatttc aataagatga
    12301 tagacggtat tgaatcagtt cgttggactg gacgtattga gcaggtgcat gacaaacctt
    12361 taatcatttt ggatggcgca cataattcag agagtataga tgctctaatt gatacaatta
    12421 aacagtacca tgataaagaa aaagtagata ttttgttctc agcaataaac ggaaaaccga
    12481 ttaacgagat ggtcaaacat ttaagtttaa ttgcgcatac gttttatgca actgaatttg
    12541 attttccgaa agcgttacgc aaagaagaaa ttgtaggtag tattgaaaat gatgaaatac
    12601 aattagtaga tgactacgtt gaatttataa aaaattatca aggtgataca ttagtaatta
    12661 ccggtagtct gtatttcata agtgaagtta aatcaaaatt agactttgaa gcattataaa
    12721 actaaaacta aaatagccat gaagaatcta tttaatcaat aggtagagct tcatggttat
    12781 tttttatgct ctaaatcgta tgtgtttata aggttcaatt tcttgccatt attaattttg
    12841 ccgagcagta atgggctgtt aaagtatcca tcaattatgc ttagcaatat tgaaaaattt
    12901 aaatgaaaaa gcgattcaat tcttgaaaaa tagtgtatat ttacattttg ataataacta
    12961 actataattt acataaggag gttgtcattt ggtagtattg ttatcttata gttgcagttg
    13021 tatctttagt tttctatatc aatttatatc tatagaagaa acgtcatttg attatttaca
    13081 tagaagatcg aaatgtgatt attgtaattc atcactcaaa tggtatgaat taatgccgat
    13141 tattagtttt ttattattaa aagggcgatg tcgaaactgt cgaaagcgta tttccctaac
    13201 acatttctta ggggaaacct ttgctataat acctatcgtc tttattaagt atgatttcac
    13261 atacgtaaat gctacgctat ttataactac atatgttttt ctgcttattt ttactatgac
    13321 cgatatcact tctttaatgt tagattgtcg cttaattata atttattgta tcgtttctct
    13381 ctcgttaagt atgatttatc cagtagcttt tatcattatt agtatgacca cgcatatatt
    13441 ctacttttta tttcgggcat atattggtta tggtgacgtt ttactaatat ctgcactttc
    13501 tttgtttttc cctctccaat tcactattta tgtcatttta tttacatttg tcattgctgg
    13561 tttagttgct ttaattacca tgatatttaa gccgattaaa ctattacccc ttgttccatt
    13621 tatatttatt tcatttttta tcaattcact tttttataat gatatccatc aatttttagg
    13681 aggcgtatat ttttgaaaat taaagaaatg gtaacttcag aaatgccaag agaacgtttg
    13741 ttaagccatg gtgcaaaaag tctttcgaat acagaattat tagctatatt aattaacacc
    13801 ggaagaaaag gattctcgag catagacatt agtaatgaac tgcttaaatc tgcttcgaat
    13861 ctgaatgaat tgaaaaaatc ttcaattaac gatttgatac aagttaaagg gattggatta
    13921 caaaaagcaa ttactttaaa agcagcattt gagctagggg aaaggatggg gagaagagct
    13981 gaaaataatc gtataaaaat aacgcaacca agtgatgttg ctgattatat gattccaaca
    14041 atgaaagatt taacacaaga acattttgtc attttattgt taaattcaaa aaatgtagtg
    14101 attaaagaaa cctgtgtttt taaaggtaca ttaaatagtt cgattgtaca tccacgtgaa
    14161 atttttagta ttgcggtgag agaaaatgcc aatgcaatca tcgcagttca taatcatcca
    14221 tccggtgatg taacgccctc acaagaagat atcataacaa caatgaggtt gaaggagtgt
    14281 ggtttgattt tagggataga tttattggat catattataa tcggtgataa tagatttacg
    14341 agtcttgtag aagcgggtta ctttgatgaa aatgattgaa gttgatagaa ttaatgacgt
    14401 atcttgtgta taatacctac gaagtacttt cattggagga aaaatagtga ctctatttat
    14461 tattatcggg gttctcgtgc caatggttta taccatgcag ttaaatatta aaaatgaacc
    14521 tgtaacaaag cgcaatctat taataacatt agctttatct acgttaggta ttttagtaac
    14581 ggcattagca ggtgtgattg ttacaaaaca agcttttcct ttattaagtg tagcaatagg
    14641 ctcaattttt acaggaatcg tttggggcct tttactaagc ggtagctatg cgctgatacg
    14701 atttttatct aacgcatttg ggcgtaagta atagtaatct gttcatcaag tagtatacgt
    14761 gcttgaaaac aaattaaaac tcctaatgtg gaactagtta aaaaattcta aactagtaca
    14821 ttaggagttt tgttatgcag aataaattta attgttaaat tgaaagtgtg gtaaaaaccc
    14881 actatttatt tgaaaaaaat cgagcaacca tattaaacct tgatatccta agtaaataca
    14941 taataaaaca agtccgacat aaattaaaaa tcgcaaaata gaaagtccaa ctctaaaaag
    15001 gaggatgact aatagtgcta ttaaaataat tgttagtata ctcaatgcta caaacctcct
    15061 catatgcttt taaatcataa caaaattata agctatttta aatgaacgtg catcagtcct
    15121 aagatatatc atgattaagg ctgaagactg aggaaaatat acataataaa atatataatt
    15181 agatgaagac attggaggcg aactatgaga ttgatattta gtatgattaa aaacattata
    15241 gcagtaatag caattgtgat aattgtttat atcgccttga aatacgcacc ttttttaaaa
    15301 gaacaagatt ggaatcctgt aaatcacgat aatgatcaaa tgaatcaagt tacgcaaccc
    15361 actaatgatg cccaacatgt ttatgtaagt ggtgagaaat attcattaaa agaaaatgat
    15421 ttaataaaga atgtaccatt aagccaaatt aaaaatgtat ttaaaatgat agataaacaa
    15481 gagtttatgg ctgtgtctgg aatgaatcgc atggcttata atgatcaata tattataggt
    15541 caaagaggag acgaatttat tctttataaa tttggagatg agtcaatgcg tgtttacaat
    15601 actgaatttg aaatgcaaca agacttaaat gaattagggc aaaatttaca actaaaaccc
    15661 gaaaatgctt atcaatagga aattattgca taagaaatat attttagtta tcctgtcact
    15721 agaataaatt taaaaggttg gtgtagttca aatggcagaa caatcaaaac agaaacaagc
    15781 taatgaacaa caaaaggccc agaacttatt cgcacgttgg agacaacttc agaattcgaa
    15841 cagtgaatcc tcgaacgata caaacaaata attttaaaat ttaaatcgat tatttaaact
    15901 actagtgact ggaatgtttg ctagtagttt ttttgctttt aaaatgccac aaatttttta
    15961 cggagttgtt cattttcaaa ctaattcgta gttagtgctt tatttcataa tgggagtaat
    16021 ataaaataga aaaggatata caatattttg acataataga ggtgttctgg gtgcttaagt
    16081 tttttaaaaa taacaaatta attgttgttt tatgtgcaat tatcgttttt attgcattaa
    16141 ttgggctgtc catacgttca caatctcaat cacctcctga acaatatata ggtgattctg
    16201 tgtcttttgg acaacgagtt gtgagttatc cagttaattt tgttgctggt acgattgggg
    16261 acttttttaa aaaaggagat tctaaagaat ctaaaaataa gattagccag ttagaatcta
    16321 agaaccaaca attagaagcg gaaaatgaaa aattaaaaaa agagcttgat ttaaaagata
    16381 tttcaaaatt tgatcctatt tctactacgg ttttagcaag aaatccggat cagtggatga
    16441 atacaattgt tattgataag ggatctaaat taggtataac ttcaaatatg gctgtgatga
    16501 catcaaaagg ttttgttgga agagttacta aagttaataa attttcttca caagttgatt
    16561 taatctcaac taatacacgt gcgggtaaat tatctgtaaa tatacaacac ggctctaaaa
    16621 atatatttgg cttaattgat cgttatgatg aaaagaactc agaacttgta attagtgata
    16681 ttaataatag agataatatc tcaaaaggtg ataaagtcgt tacaagtgga ttagctgatc
    16741 aattaccaag tgatttatat ataggagaag tgactaaggt tcaaaatgat caatatggct
    16801 tagctaaaga agttaggatt aagactggtg cagacttaac agatttgagt catgtttatg
    16861 ttgcaaaaag agatcctaaa acaattcctg atgatgaaag cagggataaa taatgcgtac
    16921 actgtattat tttttgatag gtattttact attttatata gatactgcaa ttgggcttct
    16981 tattccaatg aacataggta agtttgaact tgtatttgta ccacacctta catttatgta
    17041 tattttaatg atggtagtgt atcgtggctt tggcgtatca ttattgctca gcatattttt
    17101 aggcgtaatg actgatgtat actttggtag tatttatgga gtgtacttat ttggctatat
    17161 attgttttta gcacttatag atcgattctt taaaattttt tacaaagatc attcgatgtt
    17221 attcattatt atattagcca gcaccttatt attagaagtc tatgtggcat taatatacgg
    17281 tatgttagga ttcattcaat ttgatattat tcattttgta gtctttagat tattgccaac
    17341 attaattatg aattttgtac tgttgattat gctttatccg ttgattataa agttccttaa
    17401 aaaaacaaac aatgacattg acatgaaacg tcgtcaatgg taagatgcaa tagttgagta
    17461 gttataagta gctacataca accgctcaaa tataggttca agaacatttt taatgaagaa
    17521 agcgattttc aatcaaggcg ttgaaggaag aaacgagaag agtttatctt tataaatgac
    17581 tcgagttacg accgaaacaa cgtagagtgc aaacgcttga ctcaataacg aaatgtcacc
    17641 tatgtatggc gtgacttatt atacaggagg tgcaaagtat gtttgctatt attgaaacag
    17701 gtggaaaaca aatcaaagta gaagaaggtc aagaaatctt cgttgaaaaa ttagacgtaa
    17761 acgaaggaga tacttttaca tttgataaag tattatttgt aggtggagat tcagttaaag
    17821 ttggagcgcc aacagttgaa ggtgcaacag ttactgctac tgttaataaa caaggtcgcg
    17881 gtaaaaaaat tactgtattc acatacaaac gtcgtaaaaa ttcaaaacgt aaaaaaggcc
    17941 atcgtcaacc atacactaaa ttaacaatcg ataaaatcaa cgcgtaatta ttatgattac
    18001 tgttgatatt acagttaatg atgaaggcaa agtaacagac gttattatgg atggccatgc
    18061 tgaccatggt gaatatggtc atgatatcgt ttgtgctgga gcttcagctg tattgtttgg
    18121 tagtgttaat gcgattatag gattgacatc tgagagacca gatatcaatt atgacgacaa
    18181 tggtggtcat tttcatataa gaagcgttga tacaaataac gatgaagcgc aactaattct
    18241 tcaaacaatg cttgtgtctt tacaaactat tgaagaagaa tataatgaga atattagatt
    18301 aaattataag tgaggtgcat tccgatgtta aaattaaact tacaattctt cgcatctaaa
    18361 aaaggggtaa gttctacaaa aaacggacgt gactctgaat caaaacgctt aggtgctaaa
    18421 cgtgctgacg gtcaattcgt aacaggtggt tcaattttat atcgccaacg tggtactaaa
    18481 atttaccctg gtgaaaatgt aggtcgtggt ggcgatgata cattattcgc taaaatcgac
    18541 ggcgttgtta aattcgaacg taaaggtcgc gacaaaaaac aagtttctgt atatgcagta
    18601 gctgaataat tttgtctagt taacaccaga agtgaatctt ctggtgtttt ttacttttta
    18661 taaaacgttt ttcattatta ttttcatttt gttattaaaa aatgggaatt ttagacgtta
    18721 tactaaatgt gcgactgcat aagagcccct aatcgctaaa ctataagggg ctctaatatg
    18781 ctataattat tgggaaaatg aaaattatat gtaaaagagg tgagatatat gtttgtcgat
    18841 caagtcaaaa tatctcttaa agccggtgat ggtggtaatg gtattaccgc atacagaaga
    18901 gaaaaatatg taccatttgg tggaccagct ggcggtgacg gtggtaaagg tgcttcagtc
    18961 gtatttgaag tggatgaagg tttaagaacg ttattagatt ttagatatca acgtcatttt
    19021 aaagcaagca aaggtgaaaa tggccaaagt agtaatatgc atggtaaaaa tgcggaagat
    19081 ttagtattaa aagttccacc tggtacaatt attaaaaatg ttgaaacaga cgaagtgtta
    19141 gcagatcttg ttgaagatgg tcaaagagct gtagtagcga agggcggtcg aggtggccga
    19201 ggtaattcac gttttgcaac acctagaaac cctgcacctg acttcagtga aaaaggtgaa
    19261 ccaggcgagg aattagatgt atctttagaa ttgaaattat tagctgatgt aggattagta
    19321 ggtttcccta gtgtgggtaa atcgacttta ttatctatcg tttcaaaagc taagcctaaa
    19381 attggggcat atcattttac aacgattaaa ccaaatctag gtgttgtttc aacacctgat
    19441 caacgtagtt ttgttatggc agatttacca ggtttaattg aaggtgcatc tgatggcgtt
    19501 ggattaggac atcaattttt aagacatgta gagagaacaa aagttattgt tcacatgatt
    19561 gatatgagcg gttctgaagg tagagaacct attgaagatt ataaagtcat taatcaagaa
    19621 ttagctgcgt acgagcaacg tttagaagat agacctcaaa tcgtagtagc taacaagatg
    19681 gatttacctg aatcacaaga taatttaaac ttgtttaaag aagaaattgg cgaagatgtg
    19741 ccagttattc cagtttcaac aataacgcgt gataatattg atcaattatt atatgcaata
    19801 gcagataaat tagaagaata taaagatgtt gacttcacag ttgaagaaga ggagtcagtt
    19861 ggcattaacc gagtattata taaacataca ccgtcacaag ataaatttac aatttcaaga
    19921 gatgatgatg gtgcttatgt ggtaagtggt aatgctattg aaagaatgtt taaaatgact
    19981 gactttaaca gtgatccagc agtacgtcga tttgctcgtc aaatgcgttc gatgggtatt
    20041 gatgatgcac ttagagaacg tggttgtaaa aatggtgata tcgttagaat tcttggcgga
    20101 gaatttgaat tcgttgaata ggagcgtaac atgatggaca ataaagatta taaaaagttt
    20161 tatttaatta gagaagatgt cttgcctgaa tccgtggtta aaacattgaa gattaaagat
    20221 gccttaaaaa gtgatccgac attgtccatt tatgatgccg ttaaacagtt tgatctatct
    20281 agaagtgctt tttataaata tagagaaacg atatttccag tagacgataa aatgcttgac
    20341 catcgagaat ttacattaat tttatatgta acagatattg tgggtatgtt ggcacgtgta
    20401 ctagatgtta tatcaaagtt agaactatct gtattaacga ttcatcaaag tattccaatg
    20461 gaagaaaaag caacaataac attatcactg aatgctaaat ctaaagaaac tgcagtagaa
    20521 gatgttattg gcgctttgag aaatttagat tatgtatcaa aagtagaatt aattagtatg
    20581 agtatgtaag gatgtgccta taatgtacgc gtatgtcaaa ggtaagttaa cacatttata
    20641 tcctacacac gtagttgttg aaactgctgg tgttggttat gaaattcaaa caccaaattc
    20701 ttatcgtttt caaaagcaac tagatcatga agttttaatt catacatctt taattgttcg
    20761 tgaagatgca caattattgt atggatttag tagtgaagaa gagaaagata tgttcttgag
    20821 tttaattaaa gttactggta ttggtccgaa atcagcttta gctattttag cgacaagtac
    20881 gcctaatgaa gtaaaacgtg ccattgaaaa tgaaaatgat acgtatttaa ctaaattccc
    20941 aggaattggt aagaaaacgg caagacagat tgtcttagat ttaaaaggta aagtgaaaat
    21001 cactgaagaa gatagcgatt cattattaca agtagacgct acttcgacgg tgcaagatca
    21061 attcgtgcaa gaagcaatgt tagcgttaga agcattaggt tattctaaac gagagcttgc
    21121 aaaagttgag aaaacgttaa ataaaaataa atatgactca gttgatgaag ctgttaaggc
    21181 aggtcttcaa ttagttgtat cttaatttta aatagattaa taggggaagt gttgtcatga
    21241 atgagcgtat ggttgatcaa tcaatgcata gtgaagaaac tgatttcgaa ttgtcgctta
    21301 gacctacgag attacgacaa tatattggtc aaaattcaat aaaaagtaat ttagaagtat
    21361 ttattaaagc ggctaaactt cgtcatgaac cattagatca tgtattgctt tttggccccc
    21421 ctggattagg taagacaaca ttatctaata tcattgccaa tgaaatggaa gttaatatac
    21481 gtacagtatc agggccttca ttagaaagac ctggtgattt ggctgcaatt ttatcaggac
    21541 ttcaacctgg agatgttttg tttattgatg aaatacacag actgagtagt gttgttgaag
    21601 aagtgttata ccctgcaatg gaagatttct ttttagatat tatcattggt aaaggcgatg
    21661 aggctagaag tatccgtatc gacttacctc cattcacttt ggtaggtgca acaacgcgag
    21721 ctggcagctt aacaggtcca ctaagggatc gatttggtgt gcacttaaga ttagaatatt
    21781 ataatgaatc agatttaaaa gaaatcatta ttagaacagc tgaggtttta ggcacaggta
    21841 ttgatgaaga aagtgccatt gaacttgcta aacgttctag agggactcca agagtagcaa
    21901 atcgactatt gaagcgggta agagacttcc agcaagtgaa tgaagatgaa caaatataca
    21961 ttgaaacaac gaagcacgca ttaggtttac ttcaagttga tcaacacgga ctagattaca
    22021 ttgatcataa aatgatgaac tgtattatta agcagtataa tggtggacct gttggtttag
    22081 atacgattgc cgtaacaatt ggtgaagaac gtattacaat tgaggacgtt tatgagccat
    22141 ttcttattca gaaaggcttt ttagaacgta cgccacgtgg cagaaaagca acaccattag
    22201 cttatgaaca ttttgcaaag tcgaatgagg agagagaata acgtgaattt tgaagaattt
    22261 gactatgact taccagaatc attaattgct caaacgcctt taaaagatcg tgatcatagt
    22321 cgtttattag tcatggatag agaaactggt gaaatgaaac atttacattt caaagatatc
    22381 attgagtatt ttagacctgg tgatacatta gtgcttaacg atacgcgagt aatgccagct
    22441 agactttttg gtttaaaaga agaaactggt gcaaaagttg aaatgttaat gttaactcaa
    22501 attgaaggta atgattggga agtcttactg aaaccagcta agcgtattaa agttggtaat
    22561 aaattgaatt ttggtaatgg caaaattata gctgaatgca taaaagaaat ggatcaaggt
    22621 ggacgcatca tgcgtttaca ttatgaaggt attttacaag aaagattaga tgaattaggg
    22681 gaaatgccac tgccaccata catcaaagaa cgtttagatg atccagatcg ttatcaaaca
    22741 gtttacgcta aagaaagtgg ttcagcggca gcaccaacag caggattaca ttttactgat
    22801 gagttattaa ctgaaattaa aaataaaggt gttaatatcg catttgttac attacatgtt
    22861 gggttaggta cgtttagacc ggtgagcgtc gatgatgtga atgaccacga aatgcatagt
    22921 gaatattatc aaatgacaca agaaacagct gatttattaa atgatactga gtccaaagga
    22981 catcgcatta tatcagttgg tacaacttca acacgtacac ttgaaacaat tcgacgcgat
    23041 catgataaat ttgttgaaac gagtggctgg actaatatat ttatttatcc aggatttgat
    23101 tttaaagcaa ttgatggcca gattactaat tttcatttac caaaatcaac attagttatg
    23161 ctagtatcag cgtttagtac tcgtgaaaat gttctgaatg cttataaaac ggcagtaaat
    23221 ttagaatata gattctttag ttttggcgat gcaatgttaa ttatataaaa agaatgtgag
    23281 gattttgaat atgcctgcag taacatacga acacattaaa acttgtaaac aatcaggtgc
    23341 gcgtttaggt atcgtgcaca caccacacgg ttcatttgaa acacctatgt ttatgccagt
    23401 tggtactaaa gcaaccgtta aaacaatgag tccagaagag ttaagacaaa ttgaagcaaa
    23461 aatcattttg ggcaacacat atcatttgtg gttacaaccc ggaaatgata ttatcaaaca
    23521 cgctggggga ttacataaat tcatgaattg ggatggtccg attctaacag attcaggcgg
    23581 tttccaagtg tttagtttaa gtaatttacg taaaattaca gaagaaggcg tggaatttag
    23641 acatcatact aatgggtcta aattattttt gagtcctgag aaatcaatgc aaattcaaaa
    23701 tgatttaggt tctgatatta tgatggcatt tgatgaatgt ccaccaatgc ctgctgaata
    23761 tgattatgta aaaaaatcta ttgaacgtac aacacgttgg gcgaaaagat gtctagatgc
    23821 acaccaaaga cctgaagatc aagcattgtt cggcattata caaggtggcg aatatgaaga
    23881 tttaagagaa caaagtgcaa aggatttagt agaattagat tttcctggtt atgcaatcgg
    23941 cggtttgtca gttggtgaac ctaaaccggt tatgtataaa atggttgaac atacagagca
    24001 gtttatgcct aaagataaac caagatattt aatgggtgta ggatctccag atgcgttaat
    24061 cgaatgtagt attcgcggca tggatatgtt tgattgtgtc ttaccgacac gtattgccag
    24121 aaatggtact tgtatgacat cgcaaggtcg tttagttatt aaaaatgcaa aatttgcaga
    24181 tgatttaaga ccgttagatg agaattgtga ctgttataca tgtcaaaact attcaagagc
    24241 gtatatacgt catttaatca aggcagagga aacttttggt attcgtctta ctactattca
    24301 taatttacat tttctgctaa aattaatgga agatataaga caagccattc gagaagatcg
    24361 tcttttagat ttcaaagaag aattcttcga gcaatatgga ttaaatgttg agaacccaaa
    24421 aaacttttaa gcaagaggag cgtataaaat gcaattttca ttactaatat atatagtcgt
    24481 aatttttgcg gttatgtatt tcttgatgat tagaccacaa caaaaacgtg cgaaacagca
    24541 tcgtgagttg attaataaca ttcaatctgg tcaaagaatt acaactattg gtggtattaa
    24601 aggtactgtt aaagcagtag atgaaacaac tgttgttatt acagttaatg gtcatggtac
    24661 tgaattaact ttcgaaaaac ctgctattaa acaagttgac ccttcataac gagaagtggt
    24721 attaaaaagg atgaaacgaa tagcgtttca tcctttttaa gttataagta gtatgtagaa
    24781 tagcttattt ttattccaaa aaaagaaatt gtgatacata ataattgtta aatttaaatt
    24841 aaatatatct atgactattt ttactccctg ctctagtatg ttaatatgta taaggctaat
    24901 aaattttgta agaaagattt aacttgcgtt ataaaatagt attcaagtat tctaaataca
    24961 tacgtaaata atgaggtgtt catgtgaaga aaagtagtag aataattgcg ttcttgcttt
    25021 tagtcgtatt gttgtttgcc ggaatggctg caacttataa aagtgttata aagaatgtca
    25081 atttaggact tgatttgcaa ggtggatttg aggtgcttta tcaagtcgat cctttaaata
    25141 aaggcgacaa aatagataaa aaagccttac aatcaacagc gcaaacatta gaaaatcgtg
    25201 ttaacgtttt aggtgtttcc gaacctaaaa ttcaagttga agaacctaat agaattagag
    25261 ttcaacttgc tggtgtaaca gaccagaatg aagcacgtaa aattttatct tctcaggcta
    25321 atttaacaat tcgcgatgca gaagataaag taaaattaag cggttctgat attaaacagg
    25381 gatctgccaa acaagaattt aaacaggaaa caaaccagcc tacagttact tttaaagtaa
    25441 aagacaaaaa caaatttaaa aaagtaacgg aagaaatctc taagaaacgt gataatgtca
    25501 tggttgtttg gttagatttc aaaaaaggtg acagctataa aaaagaagca caaaagaaaa
    25561 accctaaatt tatttctgca gcaagtgttg atcaaccaat caattctgat agcgtagaaa
    25621 tctctggtgg atttaaagga caagaaggcg ttaaaaaagc aaaacaaatc gccgaattgt
    25681 taaatgcagg ttctttacca gttgacttga aagaaattta ttcaaactca gtaggtgcac
    25741 aatttggtca agatgcatta gataaaactg tgtttgcatc gtttattggt gtagcattaa
    25801 tttatttatt catgcttgga ttctaccgat tacctggttt agtagcgatt attgcattga
    25861 caacttatat ctatctaacg ttagtagcat ttaatttcat ttccggggtt ctaactttac
    25921 caggattagc ggcgttggta ttaggtgtag gtatggctgt agatgccaat attatcatgt
    25981 atgagcgtat taaggatgaa cttcgaatag gtagaacgat aaagcaagcc ttttctaaag
    26041 caaacaaaag ttcgttccta acaatttttg attctaactt aacaacagtt atcgccgcag
    26101 cagtattatt cttcttcggt gaaagttcag ttaaaggttt cgcgacaatg ttattattag
    26161 gtattctaat gatctttgtt acagccgtgt tcttatcaag attcttatta tcattacttg
    26221 tttcatcaaa tatattcaaa aatcaatttt ggttatttgg tgttaaaaag aataaacgac
    26281 atgatattaa tgaaggtgta gatgttcatg accttaaaac ttcattcgag aaatggaatt
    26341 ttgttaaatt agctaagcca ttaattggag taagtatttt aattgtagtt gtcggtttag
    26401 ttattcttta tatcttcaag ttaaacttag gaattgattt ctcaagtggt acacgtgtag
    26461 atttccaatc taaacaagca attactcaac aaaaggttga gcaagttgta aaagatagtg
    26521 gacttaaagc ggatcaaatt caaatcaatg gtaaagataa taaagtagca actgttcaat
    26581 ttaaagacga tttaacgcgt gctcaagata ataaattgag tgataatatt aaatcgaaat
    26641 tcggtgacac acctcaaatt aatactgtat caccaattat tggacaggaa ttagcaaaaa
    26701 atgcaatgct tgcattaatc tatgcatcga taggtatcat catctatgta tcattacgat
    26761 ttgaatggcg catgggtctt tcatctgtat tggcattatt acatgatgta ttcattatag
    26821 tagcgatttt cagtttattt agaattgaag tagatttaac atttatcgcc gctgtattaa
    26881 caattgtcgg ttattcaatt aatgatacaa tcgtaacgtt tgaccgtgta cgtgaaaact
    26941 tacaaaaggt taaagtgatt acgacaacag aacaaattga tgatatcgtt aatagatcaa
    27001 ttagacagac aatgacacgt tcaattaata cagtattaac agttattgta gtagtagttg
    27061 ctatactatt cttcggtgct cctacgatat tcaactttac tttagcatta tttatcggat
    27121 tgatttctgg tgtattctct tcaatcttca ttgccgttcc gctatgggga ataatgaaaa
    27181 aacgtcagct gaaaaaatcg ccgaaacaca aattagttgt atataaagaa aagaaatcga
    27241 acgatgaaaa gattttagtt taaaatgaat taagcggtat gtgaaacaat aaagagttca
    27301 cataccgctt tttactttgt ttaaatttaa caaaatatat ataaataagt tcccgcattc
    27361 atttttaaaa aatggtataa ttaaagtctt gattatttag ataagtgctt tttatttaaa
    27421 gtaattttag atataatgtc ttttggaaat gaggcgtaaa tatatatgat taaaccgaag
    27481 tataagtgga aattaactaa accagctgaa tacataagtg atgaattaac atcaaaatta
    27541 aagttaacgc caatcgtaaa aaaaatatta gaaagtaaat cgattattga tgaacaaaca
    27601 atagaagcca tcatctcaga tacagatatc aatcatgatg cactgcaatt gagcgatatg
    27661 actaagacta ttgaaagaat taaaagagcg atagcgaatg atgagaaaat cctagtttat
    27721 ggtgattacg atgccgacgg tgttacctca actacaattt tagtgacaac attacaactt
    27781 ttaggtgcac aagtaggatg gcatattcct aaccgcttta ccgaaggata tggaccaaac
    27841 gaactagcat ttagaaatgc tcatgatgaa ggcataacat taatcataac tgttgataat
    27901 ggcatacaag gtcataatga aattaaaatg gttcaagatt taggagttga tgtcattgta
    27961 actgatcatc atgaaattgg tagtacatta ccagaagcat atgcaatcgt acatccaatg
    28021 catccatcgt ttaattatcc gttccaacaa ttgtgtggtg caggtgttgc gtacaaatta
    28081 gcacaagcat tgattgaaaa tgtacctgat tattttaaag cattagttgc gataggtacc
    28141 attgcggatt tagtatcctt aactgatgaa aatcgatcat tagtgaaaca aggattaaaa
    28201 gtcttaaatg atcaatgtcc gacctctgtt aaagcgttgc taaaagaagc gggatacaat
    28261 gacaatattg atgaagaaac aattggtttt attattggac ctagacttaa tgctgtaggt
    28321 cgtttagatg acgcatcatt agcttgcgaa ttgttgatga ctgacgacga agaagaagct
    28381 gcatttttag cagaacaagt tgaacatttt aaccgtgaaa gaaaagatat tgtagcaact
    28441 atcacagaag aagcaatggc tatggcagaa acgaaagtta aaaagggaga tttattttta
    28501 cttttagcaa aagaaaattg gcatgaaggt gtcttaggta ttgttgcttc gaaaattgtc
    28561 gaaacatttg ctttgccaac attaatttta aatattgata gggagcaaaa tcatgcaaaa
    28621 ggttccgcca gatcaattga tcaagtgtcg atgtttgaaa tactatcagc acatcaagag
    28681 ttaatcgcta aatttggcgg ccatcatatg gctgcaggta tgacgatgga tattgaaaat
    28741 atagaatcgt tagctgaagg tttaaataaa tggatgaaag aattatctaa aacaacttcg
    28801 ttagatcccg taaagccagt agacgtatta ttaacagaaa atgatataac gattaaaaat
    28861 attcgtgata tgaatcgttt aagacccttc ggaacagatt tttctagacc tatttttgaa
    28921 atggatgatt tgtcagtttc ttcagttaag gcgatcggtc aacaaaaaaa tcatctaaaa
    28981 ttgacacttg gtgaaagtaa tatcgccgcg ctattttggc aaaatggtca cttagaacct
    29041 gagttacaag atgaacagcc aattaatata ttaggatctg ttcaaatcaa cgaatggaat
    29101 ggtaatcaat caccgcaatt aattattcaa gatattgcga tgaatgaaca gcaaatatta
    29161 gattatagaa gtaagcgaaa aagtttacct tttacagaaa atgatgaaaa tattgtcgtg
    29221 cttattcatc ctaaaagtga taaagtaaat gcgaatgaat attattatgg tgaagaaatt
    29281 aaacatcaaa ctgataaagt agtattaaga gatttaccaa cgtcaatgga agacttgtct
    29341 aattccttgc aacaactgca attttctcaa ctttatatag ttttgcaaca taatcattcg
    29401 atttacttcg atggtatacc taatatggat atttttaaaa agtgttataa agcattaata
    29461 actaaacaag aaacaaatat ccagaaagag ggtatgttat tgtgtcaaca tttaagtgtg
    29521 aaaccagata cacttaaatt catgttgaaa gttttcttag atttaaaatt tgtaacacaa
    29581 gaagatggtt taattcgaat caatcaacaa cctgataaaa gatcgattga ttccagcaaa
    29641 gtatatcaat taagacaaca acgtatggat gttgaaaagc aattattata tcaagatttt
    29701 tcagaaataa aaaattggat aaagtcacaa ttgtcgtgag caatttagga ggaaatatta
    29761 atggatttaa agcaatacgt atcagaagtt caagattggc cgaaaccagg tgttagtttc
    29821 aaggatatta ctacaattat ggataatggt gaagcatatg gctatgcaac agataaaatt
    29881 gtagaatacg caaaagacag agatgttgat atcgttgtag gacctgaagc gcgtggcttt
    29941 atcattggct gtcctgtagc ttattcaatg gggattggct ttgcacctgt tagaaaagaa
    30001 gggaaattac ctcgtgaagt cattcgttat gagtatgacc tagaatatgg tacaaatgtt
    30061 ttaacaatgc acaaagatgc aattaaacca ggtcaacgtg tgttaattac agatgattta
    30121 ttagctactg gtggtacgat tgaagcagca ataaaattag ttgaaaaatt aggcggtatc
    30181 gtagtaggta ttgcatttat aattgaattg aaatatttaa atggtattga aaaaatt
//
LOCUS       DAKPJH010000024        27791 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.024, whole genome shotgun sequence.
ACCESSION   DAKPJH010000024 DAKPJH010000000
VERSION     DAKPJH010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 27791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27791
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.024"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(196..1551)
                     /gene="brnQ"
                     /locus_tag="OY092_000886"
     CDS             complement(196..1551)
                     /gene="brnQ"
                     /locus_tag="OY092_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HCX1075849.1"
                     /translation="MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIA
                     NLGFLITAIGLPFLGIIAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPR
                     LATTSFEIAFSPFLSPKQITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLV
                     LLAIILLFAFIHPLGGISDAPISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATI
                     KKLGIENPTDIAKETIKSGTISIIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQIT
                     QYYLGNYGIVLLSLIVMVACLKTAIGLITAFSETFEHLFPKMNYLAIATVVSFISFLF
                     ANVGLTKIIMYSVPVLMFLYPLAIALIVLTLFSSKFHHSKIIYQCTIFFTMIAALVDG
                     LKASPEFISSTSFSQTLINFSQKYLPLSDIGMGWVVLSLIGFIIGFIIFKIKHRKIPQ
                     A"
     gene            complement(1827..2384)
                     /locus_tag="OY092_000887"
     CDS             complement(1827..2384)
                     /locus_tag="OY092_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HCX1075850.1"
                     /translation="MINFNKTALVLIDLQEGILKMDYAPHTAENVVQNANKLIDVFRK
                     NNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSA
                     FVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
                     QFPIDNVFPLMGQTITTNDFLNILN"
     gene            complement(2451..4091)
                     /locus_tag="OY092_000888"
     CDS             complement(2451..4091)
                     /locus_tag="OY092_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-keto acid decarboxylase family protein"
                     /protein_id="HCX1075851.1"
                     /translation="MKQRIGAYLIDAIHRAGVDKIFGVPGDFNLAFLDDIISNPNVDW
                     VGNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPT
                     RAVEQAGKYVHHSLGEGTFDDYRKMFAHITVAQGYITPENATTEIPRLINTAIAERRP
                     VHLHLPIDVAISEIEIPTPFEVTATKDTDASTYIELLATKLHQAKQPIIITGHEINSF
                     HLHQELEDFVNQTQIPVAQLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLIL
                     NIGAKLTDSATAGFSYQFNIDDVVMLNHHNIKIDDFTNDEISLPSLLKQLSNISYTNN
                     ASFPAYHRPTSPDYTVGTEPLTQQTYFKMMQNFLKPNDVIIADQGTSFFGAYDLALYK
                     NNTFIGQPLWGSIGYTLPATLGSQLADKDRRNLLLIGDGSLQLTVQAISTMIRQHIKP
                     VLFVINNDGYTVERLIHGMYEPYNEIHMWDYKALPAVFGGKNVEIHDVESSKDLQDTF
                     NAINGHPDVMHFVEVKMSVEDAPKKLIDIAKAFSQQNK"
     gene            4284..4385
                     /locus_tag="OY092_000889"
     CDS             4284..4385
                     /locus_tag="OY092_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075852.1"
                     /translation="MIPQNTIAKKKQARHLMKVYAPVYSKHYLASNN"
     gene            complement(4364..6409)
                     /locus_tag="OY092_000890"
     CDS             complement(4364..6409)
                     /locus_tag="OY092_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HCX1075853.1"
                     /translation="MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGESLQHY
                     LPFIQNGGVQTVAKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMN
                     KTMGDFLQVTPKNIGDPASGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPS
                     YLGFFAGKRFVPIMMATTSFILAFPMALIWPTIQTGLNAFSTGLLDSNTGVAVFLFGF
                     IKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQG
                     EFPVMMFGLPAAALAIYHTAKPENKKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPL
                     LFFIHAVLDGLSFLTLYLLDLHLGYTFSGGFIDYFLLGILPNKTQWWLVIPVGLVYAV
                     IYYFVFRFLIVKLKYKTPGREDKQSQAATASATELPYAVLEAMGGKANIKHLDACITR
                     LRVEVNDKSKVDVPGLKNLGASGVLEVGNNMQAIFGPKSDQIKHEMQQIMNGQVVENP
                     TTMEDDKDETVVVAEDKSATSELSHIVHAPLTGEVTPLSEVPDQVFSEKMMGDGIAIK
                     PSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLELLIHIGLDTVKLNGEGFTLHVEEGQ
                     EVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITNLDFKQGEHGNISFGNQLFEAK"
     gene            6994..8049
                     /locus_tag="OY092_000891"
     CDS             6994..8049
                     /locus_tag="OY092_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000145567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HCX1075854.1"
                     /translation="MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYH
                     YFTKLLNLLKHEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMA
                     QGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQ
                     FNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIE
                     MRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPH
                     SIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSC
                     IEPNDTFDFQKTRECKK"
     gene            8049..8945
                     /gene="murQ"
                     /locus_tag="OY092_000892"
     CDS             8049..8945
                     /gene="murQ"
                     /locus_tag="OY092_000892"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HCX1075855.1"
                     /translation="MENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVRKAIP
                     QLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQH
                     AMTMAVEGAEDHKKLAEEDLKNIDLSSKDVVIGIAASGKTPYVIGGLTFANTIGATTV
                     SISCNEHAVISEIAQYPVEVKVGPEVLTGSTRLKSGTAQKLILNMISTITMVGVGKVY
                     DNLMIDVKATNQKLIDRSVRIIQEICAITYDEAMALYQVSEHDVKVATVMGMCGISKE
                     EATRRLLNNGDIVKRAIRDRQP"
     gene            8957..10411
                     /locus_tag="OY092_000893"
     CDS             8957..10411
                     /locus_tag="OY092_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCX1075856.1"
                     /translation="MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQ
                     ELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHHHNDSEKMDYK
                     SYAADKAKANKEAHKAKQKNGKSNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLM
                     VAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTG
                     IAGKNILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPTIAL
                     LIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFT
                     PIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGI
                     GEPLIYGVTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYL
                     GYIAGLLAAYAGGFVCTYLFGTTKAMRQTDLLGD"
     gene            10414..11289
                     /locus_tag="OY092_000894"
     CDS             10414..11289
                     /locus_tag="OY092_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCX1075857.1"
                     /translation="MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADV
                     TNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENEPVETLKNKMIA
                     RATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVR
                     LLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPV
                     AQIADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMA
                     LDNYRKHLATIDFKH"
     gene            11512..12366
                     /locus_tag="OY092_000895"
     CDS             11512..12366
                     /locus_tag="OY092_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000422380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075858.1"
                     /translation="MELNEMINFVKENNKIMVTLSLTIFTSVIFPELKSWYSKIINTE
                     NKYRIFDRAIIMIGTVLPMYFLLGFLNYKIYIKLLERPHSEFINTIWFSLIGISYGLI
                     LFIAISTYRNYLAIVNRFQLYKMCENCDYIHPYRFVVNKESTLIKDCFKVGNNDLYEP
                     GSNYKIINLNQTIYGHYEKVESFYQNKNDKIFHIITLNRKNLIRSWLFINNWSIILCR
                     FTMPIVFTLFIFSLSYFDNGIYNAFIPIVMYIFTFVFQSIIFNKIYTENKQLRTQYIQ
                     KLNSGIEV"
     gene            12545..15334
                     /locus_tag="OY092_000896"
     CDS             12545..15334
                     /locus_tag="OY092_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HCX1075859.1"
                     /translation="MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNER
                     HADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSW
                     CKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQN
                     YTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRP
                     CQLAKMISRYMIINETDRILMAMRPYQVYAVEALIQQATETGNNGYIWHTTGSGKTLT
                     SFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDK
                     SLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQ
                     YFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKA
                     LKAEDNSMVEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIK
                     YYETFKRLNKKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNF
                     STDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLI
                     QAYSRTNRVEKESKAFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFM
                     DAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMD
                     EQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQI
                     DLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNF
                     ESIKKEAEFKGFAGERSIDEQALKTISNDYQNSGVVNPHHLKKMIGDLPLKEKRKARK
                     AIESFVAETTEKYGV"
     gene            15534..16376
                     /locus_tag="OY092_000897"
     CDS             15534..16376
                     /locus_tag="OY092_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HCX1075860.1"
                     /translation="MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINV
                     IQKMKSLYNYLKKSYRNEYFYKNTMLNKLLLGRHSVNTTTALSEMPIGKSIADFILLN
                     GKGVVYEIKTELDKLDRLDNQINDYYEVFNYVVVITNNKHLNKVMARYKDTTVGILVL
                     TTRNTLSEVQKPKENNSLLNTKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFD
                     VFKEIPMTKLHNNMISELKKRGNMKEYKDEFLAAPTEIKFLLYFAKMTKKDKNKLYHF
                     LKED"
     gene            16378..17301
                     /locus_tag="OY092_000898"
     CDS             16378..17301
                     /locus_tag="OY092_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7725 family protein"
                     /protein_id="HCX1075861.1"
                     /translation="MYYPYLRGKQNELFAIKELLEKGLIGDCIQPIIEPIKYTTTFKN
                     TLQYCGEKAFSINLVVNSKLTEEEISNETVEHLTEIITKNKSVIQKAYLGPSDEGNDR
                     LKQQFSSNSLAILTSVDDWEMFGDKNKLEMVFIPDDRHIKRKLRNIPNKGIIMDPFNK
                     LSRNVDYLDNDDEFYSDDHLYYKEDGYVAFSDYSVIGGEYVDGGFSPLAIAIHIVYFD
                     EANELRVKHFVSDSNNDRSNPGKKFFEAVDKLVTWSKNLDIKNRSYALGQFEELNENN
                     KYPGLGLIKRLSIMHHLEIMNRYLESQNENM"
     gene            17288..18400
                     /locus_tag="OY092_000899"
     CDS             17288..18400
                     /locus_tag="OY092_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HCX1075862.1"
                     /translation="MKICEKCFNNTEIVEIIANDNSKIDNCDIDNNHLGVKIFDTTKD
                     KDKLELIRDYLRPALELYDISINLPDTFSPKEGKKIEIALKDDWSIFKVEEAQISCIL
                     NELFKDDENLDRRVLEDLVGAKIINDKKYTNENLIVANNDWDGFCESLKYNNRFHNNM
                     INLENLAFFLDITTNYYSIEEFRERFEPLYRSRIVKFITEKSELMSPPKGFATAGRLN
                     SKWISVLYLSTKEQVSIEEVKPKHNDIIYIGKVKLQKNVTKEKLKIANLTNLTSNAIK
                     AGDDGFRKYFVNYQTLKKIHKGITNPSDEQGIDYLPFQYLADYIRSLKYDGIMYESIL
                     QDGTFNFVFFDQSLFECVNYERKRVSDVKYTLTKLS"
     gene            complement(18665..20257)
                     /locus_tag="OY092_000900"
     CDS             complement(18665..20257)
                     /locus_tag="OY092_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075863.1"
                     /translation="MSNLLEVNSLNVQFNYDETTVQAVKNVSFELRKKHILGIVGESG
                     SGKSITAKSILGLLPDYPDHTLTGEIIFNGQSLTNLSTSALQQIRGKDISMIFQDPLS
                     SLNPRLTIGKQITEVLFQHKRVSKSEAKSMTIDILEKVGIKHATRQFDAYPHELSGGM
                     RQRVMIAMALILKPQILIADEPTTALDASTQNQLLQLMKSLYEYTETSIIFITHDLGA
                     VYQFCDDVIVMKDGSVVESGTVESIFKSPQHTYTKRLIDAIPDIHQTRPPRPLNNDIL
                     LKFDRVSVDYKLPSGSLYRAVNDINLAIRKGETLGIVGESGSGKSTLAKTVVGLKEVS
                     EGFIWYNELPLSLFKDDELKALRQEIQMIFQDPFASINPRFKVIDVIKRPLIIHGKVK
                     DNDDIIEIIVSLLEKVGLDQSFLYRYPHELSGGQRQRVSIARALAVESKVIVCDEAVP
                     ALDVSIQKDIIELLKQLQLDFGITYLFITHDMGVINEICDRVAVMKNGEIVELNNTED
                     IIKHPQSDYAKQLISEVAVIAK"
     gene            20214..21692
                     /locus_tag="OY092_000901"
     CDS             20214..21692
                     /locus_tag="OY092_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075864.1"
                     /translation="MNCTFRLLTSNKFDMMLCLPIHKCVNLFYTFVYHSNLLKIILQG
                     VIIIITYLESFKSLYHKAFYKFVLSVLSLPIFLYAVIKFFFSAKRKNFYANNSEISEI
                     EQALHQKYKYLSQQKLSTQIHKEALKIFKAQSSNTNSKNIEQAHFSTYFENVLFHKFI
                     IIKVILALPMFILLTIYLQPLVRYIFERIVMAVIVIIGVIVSVFTILYFSPLDAAYSI
                     LGQNATKAQIHQFNVLHHLNEPYFIQLWDTIKGVFTFDLGTTYKGNEVVTKAVGERIP
                     ITIIVAVLALIVALIIAIPIGIISAMKRNSWLDITLMIIALIGLSIPSFWQGLLFILA
                     FSLKLDILPPSYMPEHPISLILPVLVIGTSIAASITRMTRSSVLEVMRSDYVLTAYAK
                     GLSTTQVVIKHILKNAIIPIVTLVGLLVAELLGGSAVTEQVFNINGIGRYIVQKQLIP
                     DIPAVMGGVVYISIVISLANLIIDIFYALIDPKLRSEINERK"
     gene            21698..22861
                     /locus_tag="OY092_000902"
     CDS             21698..22861
                     /locus_tag="OY092_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1075865.1"
                     /translation="MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYI
                     AETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYE
                     RTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNAL
                     LHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHI
                     DNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIK
                     RMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAP
                     DVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH"
     gene            22878..24653
                     /locus_tag="OY092_000903"
     CDS             22878..24653
                     /locus_tag="OY092_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1075866.1"
                     /translation="MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIH
                     FLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGD
                     PNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP
                     LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTL
                     DPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDY
                     FAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDID
                     QLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYL
                     THSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATF
                     QRNPGFNETEKGSYGPAKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKS
                     DKNLSIIRKNGRKSVFLMLNIKKGIFKTHSNLRQAVVNAINQDQFIKFYRGDKFKIAS
                     PITPLVDTGNEQRQDLEKVEKAINQ"
     gene            24691..26697
                     /gene="ggt"
                     /locus_tag="OY092_000904"
     CDS             24691..26697
                     /gene="ggt"
                     /locus_tag="OY092_000904"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HCX1075867.1"
                     /translation="MVINLNDKQTKTSKEGLISVSHPLAAKIGKDVLDQGGNAMDAVI
                     AIQLALNVVEPFASGIGGGGYLLYYEQSTGSITAFDARETAPAHVDKQFYLDDSGEYK
                     SFFDMTTHGKTVAVPAIPKLFDYIHKRYAKLSLEDLINPAIELAIEGHSANWATEKYS
                     RQQHARLTKYHETAQVFTHENQYWREGDWIVQPELGKTFQILREQGFNAFYKGDIAKQ
                     LVNVVKACGGTITLEDLAKYDIQIKAPISATFKDYDIYSMGPSSSGGITVIQILKLLE
                     HVDLPSMGPRSVDYLHHLIQAMHLAYSDRAQYLADDNFHEVPVQSLIDDDYLKARSTL
                     IDSNKANIDIEHGVVSDCISHTDVEENHTETTHFCVIDKEGNIASFTTSIGMIYGSGI
                     TIPGYGVLLNTTMDGFDVVDGGINEIAPYKRPLSNMAPTIVMYHGKPILTVGAPGAIS
                     IIASVAQTLINVLVFGMDIQQAIDEPRVYSSHPNRIEWEPQFSQSTILALIARGHAME
                     HKPDAYIGDVHGLQVDLNTRDASGGADDTREGTVIGGDVLSIRKEPLPSPKIYDNDTH
                     RVYFNDMQLPLYAEQVRWMYDKYWVDESVIRIIFPEVSVHIEDLRSYEIAGKNYIDIA
                     WLARKKGYQVTLKDDSLYLTDETYHSVKANTNAYYRYDRDSITR"
     gene            complement(27010..27783)
                     /locus_tag="OY092_000905"
     CDS             complement(27010..27783)
                     /locus_tag="OY092_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1075868.1"
                     /translation="MKAHKIFWLNLAAIIIISIVVSGGMFLAMKWEQIHLKDGLKKVL
                     STYPIKNLETLYEIDGHDNPHYENNDQDTWYIESSYSVVGSDELFKEDRMLLKVDKNT
                     HKITGEYDTTTNDRKNATDSTYKSYPVKVVNNKIVFTKDVKDPTLKQKIENNQFLIQN
                     GDLTSILNSNDLKVTHDPTTDYYNLSGKLSNDNPNVKQLKRRYNIPRNASTKVELKGM
                     SDLKGNNHQDQKLYFYFSSPGKNQIIYTESLTYNKLSEH"
BASE COUNT         9555 a         4174 c         5167 g         8895 t
ORIGIN      
        1 tgttcaatat aagtgtcaaa tgtaaattta ataatataaa gataaggttg tgtttgtatt
       61 aatgtgattt gtaaaatgaa agtactaata ttttttgtgg ataatcattg atatgtatgt
      121 atacgattgc agtttaatgt agtatgaata aaaaatgcca caagcatatg tttaacatat
      181 gactgtggca tagtattatg cttgtggaat tttacgatgc ttaattttaa aaataatgaa
      241 gccgataatg aaaccaatca aactgagaac aacccagccc ataccaatgt ctgataatgg
      301 taaatatttt tggctgaaat taatcaaagt ttgtgagaat gatgtgcttg aaatgaactc
      361 tggactagct tttaatccat ctactaatgc agcaatcatt gtaaagaaaa tggtacattg
      421 ataaataatt tttgaatgat ggaatttgct actaaataat gttagtacaa tcaaggcaat
      481 tgctaatgga tataagaaca ttaacactgg gactgagtac ataataatct tagttaaacc
      541 aacattcgcg aataagaacg aaataaagct tacaactgtt gcaatcgcta ggtaattcat
      601 tttagggaaa aggtgttcga atgtttctga aaatgccgta atcaaaccga tggctgtttt
      661 taaacaagca accataacga taagtgacaa caggacaata ccgtagttac ctaagtagta
      721 ttgcgtaatt tgcgctaagg caataccacc attttcacta agtttgaaat gaccaatact
      781 taatgtaccc atgattgcta gtagggtata aatgatcccc atcataatga tactgatagt
      841 accagactta attgtttctt tagcgatatc agttggattt tcgataccta actttttaat
      901 cgttgcaaca atgatgatac caaatgccaa tgacgctagc gcatctaagg tattgtatcc
      961 atctaaaaag ccgttaaata aggcatgtga ttgatattgt ttactaatag gtgcatcaga
     1021 tatgccacct aatggatgga taaaagcaaa taataaaata attgctaata atactaagaa
     1081 taccggattt aaaaatttac cgatatattc taaaattctt gatggctttc tcgcaaaaaa
     1141 ccatgcaatc acaaagaaga cgaagctaaa aataaataaa tataaagtga tttgctttgg
     1201 tgataaaaat ggcgaaaatg caatttcaaa tgatgtcgtt gccagtctag gtaaggcgaa
     1261 aaatggtccg ataactagat ataaggcaat cgtgaaaatg taagcatatg ttttattaac
     1321 acgcgatgca atttcaaata aaccagatgt ctttgaaatg ccaatagcaa tgatacctag
     1381 aaatggtaag ccaattgctg taattaaaaa tcctaagtta gcgataaaaa cgttagaacc
     1441 agcagcttga cccaagtgta ttgggaagat aagattgccg gcaccaaaga ataaaccaaa
     1501 taacatagaa cctataaaca tgttttcttt aaatgttagt ttcttcttca tatatgtatt
     1561 tgttctcctt tttagaactt ataaaaatct acttaattaa gataatatca aaaattaaac
     1621 ataaagtgat acataatttt gcaataaata ctaaattttt tgaaaattcc ggaataaata
     1681 ctgtttctta tgtagtaggg gcgtaagtta agaacgattt aacagatata gaatatgtta
     1741 aatatagaag gttagacaac ccgacgtatt aatactttgt gaaataaaga tccccctcaa
     1801 catgatcgaa ggggggaagt atatgtttag ttcaatatat ttagaaagtc gtttgtagtt
     1861 attgtttgtc ccatcaatgg gaatacatta tctattggaa attgatgtag cgtttcgttt
     1921 tgtgcactca tcatatctgt aacaaaaaac tgattgtagt ttaattgata ggcatctcgc
     1981 gctgtcgtat ctacgccaat atgcgttgcg acaccaccaa gaacaatcgt atcaattcct
     2041 cgacgtcgca attgtaagtc caaatctgtt cctacaaatg cactaaaatg tcgtttgtct
     2101 atgacaaaat cgtcatctct cttgtctaat aaatgatgga aacgactgta gtcgtcgcct
     2161 tcttttggtg gtaatgagat cattgcattt ggttgcaata catctttacc atcatagaaa
     2221 ttcacgcgaa caaaagcgat aaagccattg ttttttctaa aaacatctat taatttatta
     2281 gcgttttgaa cgacattttc agctgtatgt ggcgcataat ccatcttaag tataccttct
     2341 tgcaggtcga ttaacactaa agcggtttta ttaaaattaa tcatcttata tcagagtcct
     2401 tttcgtttaa taaagtattc gcttaaactt ataccctgta tacgatgaaa ttatttattt
     2461 tgttgtgaaa aagctttagc gatatcgatc agtttcttcg gtgcgtcttc gacagacatt
     2521 ttgacttcga caaaatgcat cacatcggga tgaccattaa ttgcattaaa cgtgtcttgt
     2581 aaatcttttg atgattcaac gtcatgaatt tcaacatttt taccaccaaa tacagctggt
     2641 aaagctttat aatcccacat gtgaatttca ttataaggtt catacatgcc gtgaataagt
     2701 cgttctaccg tatagccgtc attattaatc acaaataata ccggtttaat atgctgtcta
     2761 atcatagttg aaatagcttg aacagttagt tgcaatgagc catcaccaat taataataag
     2821 ttacgacgat ctttgtctgc taattgtgaa cctaatgttg caggtaatgt atagccgata
     2881 gaaccccata acggttgccc tataaaagta ttgtttttgt ataatgctaa atcataagca
     2941 ccaaagaatg atgtaccttg atcagcaata atgacatcat ttggttttaa gaaattttgc
     3001 atcattttaa aataagtttg ttgtgttaat ggttctgtgc caacagtata atcgggtgat
     3061 gttggacgat gataagcagg gaacgatgcg ttattcgtat atgaaatatt ggataactgt
     3121 tttaacaacg atggtagaga tatttcgtca tttgtaaaat cgtcaatttt gatattatga
     3181 tgatttaaca taacgacatc atcgatattg aattggtatg aaaatcctgc tgttgctgaa
     3241 tctgttaatt tggctccaat atttaaaatt aaatcgctgt tgtccacata atctcgtatt
     3301 ttatcttcgg caattttccc atcgtaaata cccatataat atggattttc ctcattaaaa
     3361 gcaccttttc ctaatgaaag ttgtgctact ggtatctgtg tttgatttac aaaatcttct
     3421 aattcttgat ggaggtgaaa actgttaatt tcatgtccag taatgatgat aggctgcttc
     3481 gcttgatgca gtttagttgc taataactct atatatgttg atgcatccgt atctttagtt
     3541 gccgtcactt caaatggtgt cggtatctca atttcagaga ttgcgacatc gattggtaaa
     3601 tgtaaatgaa ctgggcgtct ttcggcgatt gctgtattaa ttaaacgtgg tatttcggtt
     3661 gttgcatttt caggtgtgat ataaccttgt gcaacggtta tatgtgcaaa catttttcgg
     3721 tagtcgtcaa atgtaccttc accaagtgag tgatgtacat atttaccggc ttgttcaaca
     3781 gcacgtgtcg gcgcacctgt aatcgcaatg acaggtatgc gttcagcata tgaacctgcg
     3841 ataccgttga cggcacttaa ttcgccaaca ccaaatgtag taactaatgc agcgagtcca
     3901 ttaagacggg cataaccgtc cgctgcgtaa cttgcgttta attcatttgt atttcctacc
     3961 caatctacat tgggattgct gataatatcg tctagaaaag cgagattaaa atcaccagga
     4021 acaccaaaaa ttttatcgac gcctgctcga tgaatagcgt caattaagta agctccaatg
     4081 cgttgtttca taaaaaaacc accttttctc tatatttaca cttaaaatga tagcctcgaa
     4141 tacagtgtaa ggtcaagtaa gttgactttg ttgtgaaaac gctaacgata gtgaacaatt
     4201 aatatttttt aggaaatgag tatgaagggg ggctttaatt gatgatctta aaattcaaaa
     4261 tttaagggga gagcgaacta tcaatgatac cgcaaaatac aatagcaaag aaaaaacagg
     4321 cgcgtcacct tatgaaggta tacgcacctg tttatagtaa gcattattta gcttcaaata
     4381 attgattgcc aaatgaaatg ttgccatgtt caccttgttt aaaatcaagg tttgtaatgt
     4441 ttccttgtgt cacgataata ggcgtaatat cactctttgc atgattgcgg atgtagtcta
     4501 aatcaaagtt gattaataaa tcaccttgtt taacttcttg accttcctca acatgtaaag
     4561 taaagccttc tccgtttaat ttaacagtgt ctaaaccgat gtggattaat agttctaaac
     4621 cactatctga tacaagacca attgcatgtt ttgttgggaa aatcatttgt actttaccgt
     4681 tgaatggtgc acgaacttca ccttgtgaag gtttgatagc gataccgtca cccatcattt
     4741 tttcgctgaa cacttgatca ggcacttctg ataatggtgt tacttcacca gttaatggtg
     4801 catgcacgat atggctcaat tcgcttgttg cagatttatc ttctgcaaca acaacagttt
     4861 cgtctttatc gtcttccata gtagtaggat tttctactac ttgaccattc ataatctgtt
     4921 gcatttcatg tttgatttgg tcagattttg gaccaaaaat tgcttgcata ttattaccga
     4981 cttctaatac accggatgca cctaaatttt tcaaaccagg aacatcaact ttagatttat
     5041 cgttgacttc aacacgtaga cgtgtgatac aagcgtctaa atgtttaatg tttgctttgc
     5101 cacccatagc ttctaatact gcatatggta attcagttgc tgaagcagta gccgcttgtg
     5161 attgtttatc ttcacgacct ggtgttttgt attttaattt tacaattaag aatcggaata
     5221 cgaagtagta aataactgcg tatacaagac ctacaggaat aactaaccac cattgtgtct
     5281 tattaggtag tataccgagt aagaagtagt cgatgaaacc acctgagaat gtataaccta
     5341 gatgaagatc taataagtac aatgttaaga atgataaacc atcaagtact gcgtgaataa
     5401 agaataataa tggtgctaca aataagaatg agaattctaa aggttctgta ataccagtta
     5461 agaatgatgt taaagcagca gaacccatta aacctgctac tactttcttg ttttcaggtt
     5521 tagctgtgtg ataaattgct aaagctgctg caggtaaacc gaacatcata acagggaatt
     5581 caccttgcat gaatttacca gctgtcaaat gtgcgccttc acgaatttgt tcgataaaga
     5641 tacgttggtc accgtgaata atttcaccag ctgcattttt ccatgaacca aactcgaacc
     5701 agaacggtgc gtggaaaatg tgatgtagac cgaatggaat taataaacgc ttgatgaaac
     5761 caaataagaa tacggcaaca ccagtatttg agtctaataa tcctgtactg aatgcattta
     5821 atcctgtttg aatcgttggc caaattaatg ccattgggaa tgctaaaata aatgatgttg
     5881 tagccatcat aataggtacg aaacgcttac cagcgaagaa acctaaataa gatggtaagt
     5941 taatgttata gaacttgtta taacaccaag ctgccagggc cccgattata ataccgccga
     6001 acacacctgt ttgtaatgtt gggataccta aaatgctagc gtaaccactc gctggatcac
     6061 caatgttctt aggtgttact tgtaaaaagt cacccattgt tttgttcatg attatgtaac
     6121 cgacgaatgc tgcgatagct gctacaccat caccgccagc taatccgatt gcgacaccta
     6181 atgcgaaaat cataggcaag ttatcaaaaa tgataccacc agcacccgtc attaatttag
     6241 cgacagtttg tacgccacca ttttgtataa acggcaagta gtgttgtaat gattcacctt
     6301 gcatagctgt accgatagct aataacagac cagctgctgg taaaatcgca acaggtaaca
     6361 ttagcgcttt accaatacgt tgcaattgac cgaaaagttt cttcctcact tgtccaacct
     6421 ccaaagttgt atttattatt taagattcaa taaaaaaggc acgagcaaat agactgtgtt
     6481 ggtaaccatc acagcttaat ttaactcatg cctaatctta cttagtaaca cgttggtgta
     6541 tgtaattaat gtaaaagaag caattgacta agtagtatat aaaacggata cgttagttta
     6601 tctagcttac catcacatct tattgaatct tatttgtttg cgactcctat tttagcatgg
     6661 tgaagtatgc gttttcaata caattattaa attcaatttc aaatctctta attgttcaca
     6721 gattattatt aaaacataat ataagataat cttgaataaa atgtataaaa gttgttgtaa
     6781 caattcagca atagcagcta ttatcagcac ttaaaagaaa ggataatctt tgatggtgta
     6841 ataattaact tgtgacaaaa atatgtaaga ttattacaat gaacaggctt taactgatta
     6901 atattgtaat gtgttttctc ttatagtaaa atgtaagcga ttacacaact caactatatt
     6961 ttcctaataa ttatattgtt aaggagggct actttgacag gcttttcagt gtatttagga
     7021 caacctttag atgaagcgta tattaagcga atgattaaac aaggttacca aatgattttt
     7081 acatctgtac aaataccaga agaagatgac gagacaaaat atcattattt cacaaaacta
     7141 ctcaatttat taaaacatga acaagtgact tacctcatag atgctaatcc atctatttta
     7201 acaccatctt tttatgagca tcttcggcaa tatgatgcac aatttatgat tcgtatcgat
     7261 catagtacat caattgaggc aatcgaagcg ataatggcac agggtttaaa gtgctgtttg
     7321 aatgcaagta ttatttcccg ggaattgtta acaagcttac atcaacaatt gaatgatttt
     7381 acattacttt cattttgtca taactattat ccaagaccag atacgggatt atctgttgac
     7441 ttggtcaata agaaaaatga actcatttat caatttaatc caaaggcaca aatatatggt
     7501 tttattgtag ggagtggttt gcgaggtcct ttgcataaag gcttgccaac aattgaagca
     7561 acgagacata gtcatcctgt cgttgcagct aaattactac aagaaactgg tgtatctgaa
     7621 gtgttagttg gagactcatt gattgaaatg aggcaggcaa aacaacttat agatttttgc
     7681 aagcataggc atttcacgtt atgtattgaa gaagtgtttg atacgacggt gacttacctt
     7741 ttcgatatgt gtcataaagt acgcccggat aatccggaaa atgtcattcg ttcggaaacg
     7801 tcaagacaaa tatgtccaca ttcgattcaa ccacagttta cgacgcaacg acgcattggt
     7861 tcagtaaccg ttgataattt gaataacgga cgttatcaag gtgaaatgca aattgtgaga
     7921 caaacgctta gtgcacatga caatgtgaat gttgttgcac aaattattaa agaagactta
     7981 ccactgttaa gttgtatcga gccgaatgat acatttgatt ttcaaaaaac tagggagtgt
     8041 aagaagtgat ggaaaatagt acgaccgaag cgcgtaatga agcgacgatg catcttgatg
     8101 aaatgactgt ggaagaggct ttaattacga tgaataaaga agatcagcaa gtcccgttag
     8161 cagttcgaaa ggcaatacca caattgacaa aagtaattaa aaaaacaatt gcacagtata
     8221 aaaagggtgg acgattgatc tatatcggtg caggtacaag tggaagattg ggtgtcttag
     8281 atgcagcgga gtgtgtacct acattcaata ctgaccctca tgaaattata ggtattattg
     8341 ctggtggaca acatgctatg acgatggctg tagaaggtgc ggaagatcac aaaaaattag
     8401 cggaagaaga tttgaaaaat atagatttat catcaaaaga tgtcgttata ggaattgccg
     8461 cgagtggcaa aacgccatat gttataggcg gtttaacatt tgctaacaca atcggtgcta
     8521 caacagtatc tatttcatgc aatgaacatg cagttataag tgaaattgcg cagtatccag
     8581 tagaagttaa agttggtcca gaagtattaa ctggttcaac gcgtttaaag tctggtacag
     8641 cacaaaaatt aattttaaat atgatttcaa ccatcacaat ggttggtgtc ggaaaagttt
     8701 acgataacct catgattgat gttaaagcaa ccaatcaaaa actgatcgac cgttcagtgc
     8761 gtattattca agaaatatgt gctatcacat atgatgaagc aatggcgtta tatcaggtat
     8821 ctgagcatga tgtgaaagtt gcgacagtta tgggtatgtg tggcatttct aaggaagaag
     8881 caacaagacg gttactaaac aatggtgaca ttgttaaacg agcaatcaga gatagacaac
     8941 cttaggaggg atttaaatga ccaaagaaca acaacttgca gaacgaatta ttgctgcagt
     9001 aggtggtatg gataatatag atagtgtcat gaactgtatg acacgtgtgc gtattaaagt
     9061 attagatgaa aataaagtag atgatcaaga actaaggcat attgatggtg tcatgggtgt
     9121 tatacacgat gaacgcattc aagttgtggt tggacctggt acagtcaata aagtggctaa
     9181 tcatatggcg gaattaagtg gtgttaaact aggtgaccca ataccacacc atcacaatga
     9241 tagtgaaaaa atggactata aatcatatgc agctgataaa gcaaaggcga ataaagaagc
     9301 acataaagca aaacaaaaga atggtaagtc gaataaagta ttgaaatcaa ttgccaatat
     9361 ctttataccg ttgattcctg catttattgg agctggatta attggtggta ttgcagcagt
     9421 actgagtaac ttaatggtgg caggttatat ttcaggtgct tggattacgc aacttataac
     9481 agtatttaat gtcattaaag acggtatgtt agcatactta gctattttca ctggtattaa
     9541 tgcggctaaa gaatttggtg cgacaccagg acttggtggc gtgattggtg gtacaacgtt
     9601 attaacgggt attgctggta aaaatatttt aatgaatgtc ttcactggag aaccattgca
     9661 acctggacaa ggtggaatta ttggcgttat ttttgccgtt tggattttaa gtattgtcga
     9721 aaagagattg cataaaattg tgccaaatgc gattgatatt attgtaacgc cgactattgc
     9781 attgttgatc gtaggactat taactatctt tatctttatg ccattagcag gttttgtttc
     9841 agacagttta gtttcagtag ttaacggaat tattagtatt ggtggcgtat ttagtggatt
     9901 tatcattggt gcaagcttcc taccgttagt tatgttaggg cttcatcata tttttacgcc
     9961 aattcatata gaaatgatta accaatctgg tgctacttac ttattgccaa tagcagcgat
    10021 ggctggtgct ggacaagtag gtgccgcatt agcactttgg gtaagatgta aacgcaacac
    10081 aacattacgt aatactttaa aaggtgcatt gccagttggt ttcctaggta ttggagaacc
    10141 attaatctat ggtgtgactt tgccattagg tcgacctttc ttaactgctt gtattggcgg
    10201 tggtattggt ggtgctgtaa taggtggaat tggacatatt ggtgccaaag caataggccc
    10261 aagtggtgtg tcactattac cattaatctc agataatatg tatttaggtt atattgcagg
    10321 gttacttgct gcgtatgctg gtggattcgt ttgtacatat ttatttggaa cgacaaaggc
    10381 gatgcgacag acagatttgt tgggtgatta atgatgacaa atattttata tcgcattgat
    10441 aagcagttga gtgattttac gaagacagaa aagataatcg ctgattacat tttaaagaat
    10501 ccacataaaa tcattgatat gactgtgaat gatttggcag atgttacgaa tgttagtaca
    10561 gcatcaattg ttagatttag tcggaaaatg acacatcaag gttttcaaga gctaaagatt
    10621 gcgatatctc gatacttacc cgaagatatt gcaaccaatc cacatttgga attgattgaa
    10681 aatgaacctg tagaaacttt gaaaaataaa atgattgcta gagcaacgaa tacgatgcga
    10741 tttgtagcta ctaatattat ggatgcgcaa attgatgcaa tttgtgatgt gttgaaaaat
    10801 gccaggacaa tatttttatt tggatttggc gcatcgagtt tgactattgg tgatcttttt
    10861 caaaagttat ctcgtattgg cttaaatgtc aggttattac atgaaacgca tttacttgtg
    10921 tcaacatttg cgacgcatga tgatagagat tgcatgattt ttgtgacgaa tcaaggtagt
    10981 catagtgaat tgcagtcaat tgcacaggtg gccacacatt acagtattcc catcataact
    11041 atatctagta cagctaataa tccagtggct caaattgcag actatgcatt gatttatggc
    11101 agaactgatg aaaatgaaat gcgtatggcg gctacaacgt cactatttgc acagttattc
    11161 acggtagata tattgtacta tcgatttgta gcattaaatt atcatgcgat tctagattgt
    11221 ataacccaat cgaaaatggc acttgataat tacaggaagc atcttgcgac gatagatttt
    11281 aaacattaga tattgtgcgc gttctaatat aaagttagtt gcaacgtaaa caattgaagt
    11341 ttttgatgtg attcagttgc ttgatgaaaa attgttgcta caagtttgta aaactggcat
    11401 agaggctatt ttgaaaatga taaaggcgtg acaaattaaa gcaaagttca gatttgagct
    11461 ttgctttttt catagatgga aattaaatgc tgttattaag ggggaattaa tttggaactt
    11521 aacgagatga ttaattttgt aaaagaaaac aataagataa tggttacttt atcgctaaca
    11581 attttcacgt ctgtaatatt tcctgagtta aaaagttggt attcaaaaat cattaatact
    11641 gaaaataaat atagaatatt cgatagggca attattatga ttggcacagt gttaccaatg
    11701 tattttcttt taggattttt gaattataaa atatatatta aactgctaga aagacctcat
    11761 agtgaattta ttaatacaat atggttttca ttaataggca taagttatgg attaatctta
    11821 tttatagcta tttcaactta cagaaattat ttagcgattg ttaatagatt tcaattatat
    11881 aaaatgtgtg aaaattgtga ttacatacat ccctataggt ttgttgtaaa caaagaaagt
    11941 acattaatta aagattgttt taaagttggc aataatgacc tttacgaacc tggatcaaac
    12001 tacaaaataa ttaacctaaa tcaaaccata tatggacact atgaaaaagt tgaaagtttt
    12061 tatcaaaata aaaacgacaa aatattccat atcattacgc tgaatagaaa aaacttaata
    12121 agaagttggc tttttataaa taattggtct attattttat gtcgttttac aatgccgata
    12181 gtgttcactt tatttatttt ttctttatcc tattttgata atggcattta taatgctttt
    12241 attccaattg tgatgtacat tttcactttt gtttttcaat caatcatatt caataaaata
    12301 tatacagaga acaaacaatt gaggacacaa tatattcaaa agttgaactc tggcatagaa
    12361 gtataaaaat ataaaggata gtgtgtgttg gtgtttttag tatacgactt acctcaaaga
    12421 caaatattaa aagataagac aataaaatta gaataaattt acgtttgaag ataaaaaaca
    12481 aacatttttc attaaagttt atgatatatt tagagcaata gaaagtgtat ggaaggggat
    12541 atgaatggca taccaaagtg aatacgcatt agaaaatgaa atgatgaatc aacttgaaca
    12601 attgggttac gaaagagtaa cgatacgtga taataagcaa ttgcttgata attttagaac
    12661 gattttaaat gagcgtcatg cggacaaatt agaaggcaat cccttaacag ataaagaatt
    12721 tcaacgtctg ttaacgatga ttgatgggaa aagtattttc gagagtgccc gtattttacg
    12781 tgataaatta ccacttagac gtgatgatga gtctgagatt tatttgtcgt ttttagatac
    12841 gaaaagttgg tgtaaaaata agtttcaagt gacgaatcaa gtatctgtcg aggatacata
    12901 taaagcacgt tatgatgtaa cgatattaat caatggacta ccccttgtcc aagttgaatt
    12961 gaaacgtcga ggcattgata ttaatgaggc gtttaaccaa gtaaaacgtt accgtaaaca
    13021 aaattacaca ggcttattcc gctacataca aatgtttatc attagtaatg gtgttgaaac
    13081 gcgatacttt tctaataatg atagcgaact attgaagagt cacatgtttt attggagtga
    13141 taaacagaat aaccgaatca atacattaca atcgtttgct gagtcattta tgagaccttg
    13201 tcaattagct aagatgatat cgcgctatat gattattaat gaaacagata gaatactgat
    13261 ggcaatgcgc ccgtatcaag tgtatgcggt agaagcacta attcaacaag cgactgagac
    13321 agggaataat ggatatattt ggcatacaac tggaagtggt aagacgttga cttcttttaa
    13381 agcgagtcag attttatcac agcaagatga cattaagaaa gttatctttt tggttgaccg
    13441 caaagacttg gatagtcaaa cagaagagga atttaataaa tttgctaagg gtgctgtaga
    13501 caaaactttt aatacctcgc aactggtacg ccaactaaat gataaaagtt tgccacttat
    13561 tgtaacgacg attcaaaaaa tggctaaagc gattcaaggt aatgcccatt tattagaaca
    13621 gtataaaacg aataaagttg tatttattat tgatgagtgt catcgcagtc aatttggtga
    13681 catgcatcgt ctagttaaac aacatttcaa aaatgcccaa tactttgggt tcactggtac
    13741 gccacgtttt ccagaaaata gtagtcaaga tggtagaaca actgcagata ttttcggtag
    13801 atgcttacat acgtatttaa ttagagatgc cattcatgat ggtaatgtac ttggtttctc
    13861 agttgactat attaatactt ttaaaaataa agctttaaaa gcagaagata acagcatggt
    13921 tgaagcaatt gatacggaag aagtatggtt agcggataaa cgtgtggaat tagtaacacg
    13981 acatatcatc aataatcatg ataaatatac acgtaatcgt caatattcaa gtatatttac
    14041 agtccaaagt attcacgcgc ttattaaata ttatgagaca tttaagcgac ttaacaaaaa
    14101 gttggaacaa ccattaacgg tagctggtat atttacgttt aaacctaatg aagatgatcg
    14161 tgatggtgaa gtgccatatc attcacgtga aaaattagag ataatgatta gcgattataa
    14221 taaaaagttc gagacgaatt tttcaacaga cacaactaat gagtatttta atcatatttc
    14281 aaaaaacgtt aaaaagggcg ttaaagatag taaaattgat atcttaatcg ttgttaatat
    14341 gttcttaact ggttttgata gtaaagtact gaacacttta tatgttgata agaatttaat
    14401 gtatcatgat ttaattcaag cgtattcacg tacaaatagg gttgaaaaag aatcaaaggc
    14461 atttggtaaa attgtaaact atcgtgactt gaaaaaagag acagacgatg cactgagagt
    14521 attctcacaa acaaatgata cggatacaat tttaatgcgt agttatgaag agtataaaaa
    14581 agaatttatg gacgcttatc gtgagcttaa aatgattgtg ccgacaccac acatggttga
    14641 tgacattcaa gatgaagaag agctaaagcg ctttgttgaa gcttatcgtt tattagctaa
    14701 aataatatta cgtttaaaag catttgacga gtttgagttt acaattgatg aaattggaat
    14761 ggatgaacaa gagaatgaag actataaaag taaatattta gctgtgtacg atcaagtaaa
    14821 aagagcgacg gctgagaaaa ataaagtatc cattttaaat gatattgatt tcgaaataga
    14881 aatgatgcgt aatgatacga ttaatgtgaa ttatattatg aatatattga gacaaattga
    14941 tcttgaagac aaagcggaac aacgtcgtaa ccaagaacaa attagacgca ttttagatca
    15001 tgcagatgat ccgacattga ggttaaaacg agatctaatt agagaattca tcgacaatgt
    15061 tgtaccttct ttaaataagg atgatgatat cgatcaagaa tatgttaatt tcgaaagtat
    15121 taaaaaagaa gcggagttca aaggatttgc tggagagaga tctatcgatg aacaagccct
    15181 aaaaacaatt tcaaatgact atcagaatag tggtgttgta aacccacatc accttaaaaa
    15241 aatgattggt gatttgccat taaaagaaaa acgtaaagca agaaaagcca ttgaatcttt
    15301 cgtggcagaa acaactgaaa aatacggtgt gtaatgattc agccccctcg ctagattagt
    15361 gtagggggca taattatttc attagaaaag gctcatttat tttgcaatca tcacttggtt
    15421 tcaataaaat tttatcatcg tatgtgtata gaaataatgt ctataggcat ttaaaatagt
    15481 ttataatatt aacaggataa gtattaaatg tatgttgaag gaggtgcgta gctatggata
    15541 atagaaatat gattaatcgt gtttttagtc aaaagatatt acatcaaatt gcaatcaaaa
    15601 ataaaagtga tgttgttgat gaggcatatg atttttatat acagggacct aaaaatatca
    15661 atgtaataca gaaaatgaag tctttatata actatcttaa aaagtcttat cgtaacgaat
    15721 atttttacaa aaacacaatg cttaataaac tccttctagg acgacattct gttaatacaa
    15781 ctactgcact ttctgagatg cccataggga aaagtattgc tgattttata ttgttaaacg
    15841 gcaaaggcgt tgtctatgag attaaaacag aattagataa gttggataga ttagataatc
    15901 aaattaatga ttattatgaa gtgtttaatt atgtcgtagt cattacaaat aacaaacatc
    15961 tgaataaagt tatggctaga tacaaagata caacagttgg aattttagtg ttaacaacta
    16021 gaaatacact gagtgaagtt caaaaaccta aagaaaacaa tagtctctta aacacgaaag
    16081 cgatgtacaa ctttttacga aaagaagaaa gaaaaagagt tattgcacaa aatcatatgg
    16141 atgtaccaac ttataatgat ttcacagagt atgatgtgtt atttgacgtg tttaaagaaa
    16201 taccaatgac gaaactgcat aacaatatga tttctgagtt gaaaaaaaga ggcaacatga
    16261 aagaatacaa agatgaattt ttagcagctc cgactgaaat taagttcttg ttatatttcg
    16321 caaaaatgac aaagaaagat aaaaataaac tatatcattt tcttaaggag gattaatatg
    16381 tattatcctt atttgcgtgg gaaacaaaat gaactatttg caattaaaga attgttagag
    16441 aaaggtttga ttggtgattg tattcaacct ataattgaac caattaaata tacaaccaca
    16501 tttaaaaata ctttgcaata ctgtggtgaa aaagcattct ctataaattt agtagtaaat
    16561 tcaaagttaa ctgaagaaga gattagtaac gaaactgttg aacatttaac tgaaataata
    16621 acaaaaaaca aaagtgttat tcaaaaagct tacttgggtc cttctgatga aggcaatgat
    16681 aggttgaaac agcaattttc aagtaatagt ttagctattt taacaagtgt agatgactgg
    16741 gaaatgtttg gagataaaaa taaacttgaa atggttttta taccagatga tagacacatt
    16801 aaacgtaaat tgcgtaatat tccaaacaaa ggcatcatta tggatccttt taataaacta
    16861 agtcgtaatg ttgattattt agataatgat gacgagtttt atagcgacga tcacctttat
    16921 tataaggaag atggatacgt agcattttca gactattctg ttataggtgg agaatatgta
    16981 gacggtggct tttcgccatt agctattgcg atacatattg tctattttga tgaggctaat
    17041 gagctaagag ttaagcattt tgtctctgat tctaataatg atagatcaaa tccaggtaaa
    17101 aagttttttg aggctgtaga taaattagta acatggtcaa aaaacttaga tattaaaaat
    17161 agatcttatg cgcttggaca atttgaagaa ttaaatgaaa ataataagta tccaggctta
    17221 ggtttaatta aaaggttatc tatcatgcat catctagaaa ttatgaatag atacttggag
    17281 tctcaaaatg aaaatatgtg aaaaatgttt taataatact gaaatcgtag aaatcattgc
    17341 aaatgataat agcaaaattg acaattgtga tattgataac aatcatcttg gtgttaaaat
    17401 atttgatacg actaaggaca aagataaatt agaacttatt agagattatt taagaccagc
    17461 attagaatta tatgatatta gtataaattt accagatact tttagcccaa aagaaggtaa
    17521 aaagattgaa atagcattaa aagacgactg gagtatattt aaagttgagg aagctcaaat
    17581 aagttgtatt ttaaatgaac tttttaaaga tgatgaaaat ttagatagac gagtgttgga
    17641 agatttagta ggcgctaaaa tcataaacga taaaaaatat acaaatgaaa atctaattgt
    17701 agcaaataat gactgggatg gattttgtga gagcttgaag tataacaata gatttcataa
    17761 taatatgatt aatttagaga atttagcgtt ctttctcgat atcactacta attactatag
    17821 tattgaggaa tttagagaaa gatttgaacc attatataga tctagaatag ttaagttcat
    17881 tacagagaaa agtgaactaa tgtcaccacc aaagggattt gcaacggcag gaagattgaa
    17941 ttctaaatgg ataagcgtat tataccttag tacaaaagaa caggtcagta tagaagaagt
    18001 taaacctaag cataatgaca ttatttatat aggtaaggtt aagttacaaa aaaacgttac
    18061 aaaagagaaa ttgaaaattg cgaatttaac taatttaact agtaatgcaa tcaaagctgg
    18121 cgatgatgga tttagaaagt attttgtaaa ttaccaaaca ttaaaaaaga ttcataaagg
    18181 aataacaaat ccaagcgatg aacaaggaat agattatttg ccatttcaat atttagctga
    18241 ttatattcga agccttaaat atgacgggat aatgtatgag agcatattgc aagatggtac
    18301 ttttaacttt gtgttttttg atcaaagttt atttgaatgt gttaattatg aaagaaaaag
    18361 agtaagtgat gttaaatata cattgactaa gctaagttga cacactcaaa aatctgaata
    18421 ttctaataaa atataaataa tcccccgcac ttcacatagt agcgggggat ttattctggc
    18481 gtcaaaatgc ccaaagtatg ggggtgactc ttaaatcatg gcaaagcacc taaaacttga
    18541 tatggtgccg agccctaact taacacaata tagttagtat gacaaagtca tctaacataa
    18601 cacatcagag attgcctgat ttattccaga ccatacagtg ataaagttac acaacgcatg
    18661 acttttattt agcaataact gctacttctg aaataagttg ctttgcatag tctgactgcg
    18721 gatgtttgat aatatcttct gtgttattaa gttcaacgat ttcgccattt ttcataactg
    18781 caacgcgatc acatatttca ttgataacac ccatgtcatg tgtgatgaat aaataagtaa
    18841 tgccgaagtc taactgtaat tgttttaata actcgatgat atctttttga attgaaacgt
    18901 ctaaagcggg cactgcctcg tcgcaaacaa tcactttaga ttctacagca agtgctctcg
    18961 cgatacttac acgctggcgt tgcccaccag ataattcgtg tggatagcga tataagaaac
    19021 tttgatctag gccaactttt tctaacaacg atacgataat ttcaataata tcatcattat
    19081 ctttgacttt cccgtgaatg attagtggtc gtttaatcac atcaatgact ttaaatcttg
    19141 gattaataga tgcgaatgga tcttggaaaa tcatttgtat ctcttgtcgt aaagctttca
    19201 attcatcatc tttaaataaa cttaatggta attcgttata ccaaataaag ccttctgaca
    19261 cttcctttag accgacgacc gtcttagcta atgtcgattt ccctgaccct gactcaccga
    19321 caatgcctaa tgtttcgcct tttctaatag ccaagttaat atcattaact gctcggtata
    19381 ggctgccact tggtaacttg taatccacgc tcacgcgatc gaattttaat aaaatatcat
    19441 tgtttaacgg tcttggcgga cgcgtttgat gaatatctgg aatcgcatct attaagcgtt
    19501 tcgtataggt atgttgtggc gatttaaaaa tactttcaac cgtgccactt tcaacgacac
    19561 ttccatcttt cattacaatc acatcgtcgc aaaattgata cacagcgcct aaatcgtgag
    19621 tgataaaaat aatagatgtt tctgtgtact cataaaggga cttcattaac tgcagtaatt
    19681 gattttgtgt actggcatct aatgccgttg ttggttcatc tgcgattaaa atttgtggct
    19741 ttaaaatcaa tgccattgct atcatgacac gttgacgcat accaccagaa agttcatgtg
    19801 gataagcatc aaattgtcga gttgcatgtt ttatacctac tttttctaaa atgtctattg
    19861 tcatcgactt tgcttcagat ttagatacac gtttatgttg aaatagtact tctgtaattt
    19921 gtttgccaat cgttaatctt ggattcaacg aagagagtgg atcttgaaaa atcattgaaa
    19981 tatccttgcc tcgaatttgt tgtaacgctg aagttgataa attagttaac gattgcccat
    20041 taaaaataat ttctcctgtt aatgtgtgat ctggataatc tggtagtagc cctaaaatag
    20101 atttagcagt aatacttttt cctgatcctg attcaccaac aatacctagg atatgttttt
    20161 ttcgtaattc gaaagagacg ttttttaccg cttgaactgt agtttcatca taattgaatt
    20221 gtacattcag actgttgact tctaataaat ttgacatgat gttgtgcctc cctattcaca
    20281 aatgtgtaaa tttattctat acttttgtat atcatagtaa tctactcaag attattttac
    20341 aaggagtgat tatcataatt acttatttag aatcttttaa gtcgttgtat cacaaggcat
    20401 tttacaagtt tgtattatcg gtattaagct tgccaatatt tttatatgca gtgataaagt
    20461 ttttcttttc tgctaagagg aaaaattttt acgctaataa ttctgaaatt tcagaaatcg
    20521 aacaggcgtt acatcaaaaa tataaatatt tatcgcagca aaagttatcc acacaaatac
    20581 ataaagaagc attaaaaata ttcaaggcac aaagttctaa tacgaattca aagaatattg
    20641 aacaagcaca tttttcaaca tactttgaaa atgtattatt tcataagttc atcattatca
    20701 aagtgatatt ggccttgccg atgttcatct tattgactat ttatttacag ccattagtta
    20761 gatatatttt tgagcgaatt gtcatggctg tgattgtcat cattggtgtt attgtcagtg
    20821 tgtttaccat tctgtatttt tcaccgcttg atgcggctta tagcatactg ggacaaaatg
    20881 caacaaaggc acagatacat caattcaatg tattacatca tcttaacgaa ccttatttta
    20941 ttcaattgtg ggataccatc aagggtgttt ttacttttga cttaggtacg acttacaaag
    21001 ggaatgaggt tgtgactaaa gcagttggcg aaagaattcc aattacaata attgtcgcag
    21061 tattagcgct aattgtggca ttaattattg cgataccaat tggaattatc agtgcgatga
    21121 agcgaaatag ttggcttgat atcacgttaa tgataattgc attaattggt ttatctattc
    21181 caagtttctg gcaagggcta ttattcattt tagcgttctc attgaaattg gatattttgc
    21241 caccatctta tatgccagaa catccaatat cgttgatttt acctgtactt gtcattggaa
    21301 caagtattgc tgcttctatc acgcgtatga caaggtcttc tgtacttgaa gtaatgcgca
    21361 gtgattatgt tttaactgct tatgcaaaag gattatcgac gacacaagta gttattaaac
    21421 atattttgaa aaatgccatt attccaattg taacgctagt tggtcttcta gtggcagagt
    21481 tactaggcgg ttcagcagtg acggaacaag tatttaacat taatggtatc ggtcgttata
    21541 tcgtccaaaa acaactaata cctgatatcc cagcagtcat gggtggggtc gtatatatat
    21601 caattgtaat atctttagca aacttaatta ttgatatatt ttatgcttta atcgatccaa
    21661 aattacgtag tgaaattaac gaaaggaagt gaggcatatg gtaaaactta caacaaagat
    21721 agcttcctta aaactattcg caagttatgc tattgcaact tatattttag ttatattaac
    21781 gagtgcatta aatcttttta aaggttatgt ggccgatacg ttctatattg ctgaaacatt
    21841 gctaatcgtt ttaactatca ttttaattat catcttaaca acggaacaaa catggaagca
    21901 tcatgaccta tggcgacgta ttgtcgaagt gttgttatta ttgatgacat taacaggcaa
    21961 cgtatttaca ttattaatgt ttgtaagtat tagacgttat gaacgtacat cgcaaataca
    22021 tagttataac ggctgggaat cgtttatacg aaaaactact agacatcgta ttgcgattat
    22081 cgggttactt attttagtct acatgctgac attatcaatt gtgtcacaat ttacatttga
    22141 tacgacattg gctactaaaa atcagttcaa tgcactgtta catggaccga gtctagccta
    22201 tccgtttggt actgatgatt tcggtagaga cttatttaca cgcgtagttg tcggaacgaa
    22261 gctgacattt tcaatttcaa ttatttcagt agttattgca gttatttttg gtgtgttact
    22321 aggcactatc gcaggttatt ttaatcatat tgataattta ataatgcgaa ttttagatgt
    22381 agtgtttgca attccatcat tattgttagc ggtggcaatt attgcatcat ttggagcaag
    22441 tattcccaat ttaattattg ctttaagtat cggtaatata ccatcatttg cacggacaat
    22501 gcgtgccagt gttttagaaa ttaaacgcat ggaatatgta gatgcagcgc gtatcactgg
    22561 tgaaaacact tggaatatca tatggcgtta tattttaccg aatgcgattg cgcctatgat
    22621 tgtacgtttt tcattaaata taggtgtggt tgtattaaca acaagtagtt taagtttcct
    22681 aggacttggt gttgcacctg atgtagctga atggggcaac attttacgta ccggtagtaa
    22741 ctacttggaa acgcacagta atttagctat tgtacctggt gtttgtatta tgttcgtcgt
    22801 tttagcattt aattttatag gtgatgcagt gcgtgatgca ctagatccaa gaattcatta
    22861 aaaaggtagg gatagatgtg aagaaaatca ttagtatcgc aattatagtt ttagcgttgg
    22921 tattaagtgg ttgtggtgtc cctacgaaat cagaagtggc tcaaaagtca tcgaaagttg
    22981 aagtgaaagg cgagcgacca acaatacatt tcctaggaca agcaagttat gaaaatgata
    23041 tgaatatcgt caaagatcaa ttggaaaatg caggatttaa cgtgaagatg aatatccaac
    23101 cagattatgg tagctatcgt acacaacgtc aagccggcaa ttatgatatc caaatcgatg
    23161 actggatgac agtttttggt gacccgaact atgctatgac ggcattattt agttctacag
    23221 gatcaaatag tttattgaaa gataaacatg tagaccagtt gttaaataaa gcttctactc
    23281 aaaatgaagc agatgttaaa caaacatata agcaaattga agatgaagtt gtatttgata
    23341 aagggtatat ggcgccatta tatggatcaa aaaagaattt agtatatgac aataaagtgt
    23401 tagataaaaa tagtgttgga ttgccaaatt cacgtgcatt aatatggcaa caatttgatt
    23461 acaacaatag tagagaacga gatacgcggc cacttgtgat gacacaacaa gatggtgaaa
    23521 ttcctacatt ggatccaata cgttcaattg cgccgtcagt atattcaatt aatatgaata
    23581 tgtacacaag gttattatta ttagatgaaa atgatcactt aacaacgaaa ggttcgttaa
    23641 gtcgtgatta tgctgtgaat aaggacaata aagcgtttta tttcttgtta agagatgatg
    23701 attattttgc gaaagtggtc aatggacaag cacgtaatac tggagagcgt gtatcggctg
    23761 aagatgttaa gttttcttta gatagagcac gtgataaaaa gtctgtgcct aacaataata
    23821 cttacaatat gcacaaacat ataaatgaca tcaagatatt aaaagatgag gacatcgatc
    23881 agttgcgtaa agagaaagac aaggacgata aatcaatcta tgataagttg attaaagcgt
    23941 ataacgtcaa atcgttaacg acagatggtc aaaaagtaaa taataaagac ggtatttatc
    24001 aaattgttaa aattacgaca gatcaatcga tgcctcgaga ggtaaattac ttaacacact
    24061 cttcggcagg cattttatct aaaaaatttg ttaatcaagt aaatcaagaa tatccaaaag
    24121 gatatgggga tagcagtaca attcctgcaa attcagatgg aaaaaatgcg ctttatgcaa
    24181 gtggtgcata cattatgaca cagaaaaatg catatcaagc aacgtttcaa cgtaatccag
    24241 gattcaacga aacagaaaaa ggtagttatg gaccagctaa aattaaaaat attacattga
    24301 agtttaatgg tgacccgaat aatgcattgt cagaacttag aaatcattca attgatatgt
    24361 tggcagatgt gaatcaaaaa cattttgatt taattaagtc ggataaaaat ttaagcatta
    24421 ttcgcaaaaa tggacgcaaa tcagtctttt taatgctaaa tattaaaaaa ggtatattta
    24481 agacgcattc aaacttgaga caagcagtag ttaatgcgat aaatcaggat caatttatta
    24541 agttttatcg tggcgataaa tttaaaattg catcaccgat tacaccactt gtcgatactg
    24601 gtaacgagca acgtcaagat ttagaaaaag tagaaaaagc cattaatcaa taatgtttta
    24661 aatatttaac agaaagtagg aggatataga atggtcatta acttaaatga caaacagaca
    24721 aaaacatcta aagaagggtt aatttccgta tcacatcctc ttgcggctaa aattggtaag
    24781 gatgtattag atcaaggtgg caacgccatg gatgcagtga ttgcaattca actggcattg
    24841 aatgtggtag aaccatttgc atcaggtatt ggtggtggcg ggtacttgtt atattatgag
    24901 caaagtactg gcagtataac tgcgtttgat gcgcgtgaga cagcccctgc acatgtagac
    24961 aaacaatttt atctagatga ttcaggcgaa tataaatcat tttttgatat gactacacat
    25021 ggtaaaactg tcgctgtgcc agcaattcca aagctgtttg attatattca caagcgttat
    25081 gctaaattgt cattggaaga tttaattaat cctgcaattg aactagccat tgaaggtcat
    25141 tcagccaatt gggctactga aaaatattcg cgccagcaac acgcacgatt gacaaagtat
    25201 cacgaaacgg cgcaagtatt tacgcatgaa aatcaatatt ggcgtgaagg tgattggatt
    25261 gtacaacccg aattaggtaa gacatttcaa atattaagag aacaagggtt taatgcattt
    25321 tataaaggtg acattgcgaa acaattagtc aatgttgtca aagcatgtgg tgggacaatc
    25381 actttagagg atctagccaa atatgacatt cagattaaag cgccaatcag tgcaacattt
    25441 aaagactatg acatttattc aatgggacca tctagttctg gcggtatcac ggtaattcaa
    25501 atattgaagt tattagaaca tgtcgattta ccatctatgg gtccaagatc tgttgattac
    25561 ttgcatcatt tgatacaagc gatgcattta gcatatagtg atcgtgcgca atacttggcg
    25621 gatgataatt ttcatgaggt gcctgtacag tcattaattg atgacgatta tttaaaagca
    25681 cgcagtacgc tcattgatag caataaagca aatattgata tagagcatgg tgttgtgtct
    25741 gattgcatta gtcatacaga tgttgaagaa aatcataccg aaacaactca tttttgtgtg
    25801 attgataagg aaggtaatat tgcttcattt acgacatcaa ttggtatgat ttatggttca
    25861 ggtattacga ttccaggcta cggtgtgtta ttgaatacga caatggatgg ctttgatgta
    25921 gtagatggtg gtattaatga aattgcacca tataaacgac cactaagtaa catggctcca
    25981 acgattgtga tgtatcacgg gaagccgata ttaacagtag gtgcacctgg tgccataagt
    26041 atcattgcta gtgttgcgca aacattaatc aatgtattag tgtttggcat ggatattcag
    26101 caggctatag atgaacctag agtttatagt agccatccta atcgcattga atgggagcct
    26161 caattttcac aatctacaat attagcattg attgcacgtg gacatgcaat ggaacataaa
    26221 ccagatgcct atattggaga tgtacatgga ctacaggttg acttgaatac acgtgacgcg
    26281 tcgggaggtg ctgatgatac gagagaaggc acagtgatag gtggcgatgt attatcaatt
    26341 agaaaagaac cattacctag tccgaaaata tacgataatg acacccatcg agtatatttc
    26401 aatgatatgc agttgccatt atatgctgaa caagtgcggt ggatgtatga caaatattgg
    26461 gttgatgaaa gtgttattag aatcattttc cctgaagtta gtgtgcatat tgaagattta
    26521 agaagttatg aaatcgccgg aaaaaattat atagatattg cctggttggc acggaagaaa
    26581 ggttatcaag ttaccttaaa ggatgacagt ttatacttaa ctgatgaaac gtatcattca
    26641 gtgaaagcaa acacaaatgc atactataga tatgatcgag atagtatcac aagataattt
    26701 atgtatttga tatatagttt gaagtggatt ttgatttttg ttgaacgaaa gggttcgatt
    26761 tcaaacttta gagtgatgct tgagtgtagt aatgttgaag ttgttataag aaacgctagt
    26821 cgcctttgta aaatataaaa cgccccacaa attcgttttt gatgtacacc acaatagtta
    26881 gtctaaaatc taacttgatg tgattcggta caattaaatg aatgatgtga ggcgttttta
    26941 taatgtgtga ttttagtatg ttaaacgata ataaatgatt tggttatttc tataattata
    27001 tcataagtat taatgttcac ttaatttatt ataagtaagg ctttctgtgt atataatttg
    27061 gttttttcca ggacttgaaa aataaaaata aagtttctga tcttgatgat tattgccttt
    27121 taaatcactc attcccttta attccacctt tgttgatgca tttctgggaa tattatatct
    27181 acgttttaat tgtttaacgt ttggattatc attcgacaac ttaccagata aattataata
    27241 atcagtggta ggatcatgtg tgactttcaa atcattgcta tttaaaatgc ttgttaaatc
    27301 accattttga atcaaaaatt gattgttttc gattttttgt ttcagcgtgg gatcttttac
    27361 gtcttttgtg aaaacgattt tattattaac tacttttact ggataacttt tgtatgtcga
    27421 gtcagtagca ttttttctat cgtttgtagt tgtgtcatat tcaccagtta ttttatgtgt
    27481 gttcttatct acctttaaca acatacggtc ttctttaaaa agctcatctg atccaacaac
    27541 tgaataagag gattctatgt accatgtgtc ttgatcatta ttttcataat ggggattatc
    27601 gtgaccatca atttcataaa gcgtttctaa gtttttaata ggatatgtac ttagtacttt
    27661 tttaagacca tctttcaaat gaatttgttc ccacttcatt gccaaaaaca taccgccact
    27721 gactacaatt gaaataataa taattgctgc taagtttaac cagaaaattt tatgtgcttt
    27781 catacattca c
//
LOCUS       DAKPJH010000025        27146 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.025, whole genome shotgun sequence.
ACCESSION   DAKPJH010000025 DAKPJH010000000
VERSION     DAKPJH010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 27146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27146
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.025"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..299)
                     /locus_tag="OY092_000906"
     CDS             complement(<1..299)
                     /locus_tag="OY092_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
                     /protein_id="HCX1075869.1"
                     /translation="MIELLSIALKHSNIILNSIFIGAFILNLLFAFTIIFMERRSANS
                     IWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLAALKN"
     gene            465..758
                     /gene="csoR"
                     /locus_tag="OY092_000907"
     CDS             465..758
                     /gene="csoR"
                     /locus_tag="OY092_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HCX1075870.1"
                     /translation="MTEQDIAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDV
                     LTQIRATRSALNSVATKLLEQHMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD"
     gene            770..979
                     /locus_tag="OY092_000908"
     CDS             770..979
                     /locus_tag="OY092_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HCX1075871.1"
                     /translation="MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVT
                     VSYETPANLNSIEKEIYDEGYKIVF"
     gene            1107..1244
                     /locus_tag="OY092_000909"
     CDS             1107..1244
                     /locus_tag="OY092_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075872.1"
                     /translation="MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHEL
                     K"
     gene            complement(1508..2710)
                     /locus_tag="OY092_000910"
     CDS             complement(1508..2710)
                     /locus_tag="OY092_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HCX1075873.1"
                     /translation="MNYSSRQQPDKHWLRKVDWVLVATIAVLAIFSVLLINSAMGGGQ
                     YSANFGIRQIFYYILGAIFAGIIMFISPKKIKHYTYLLYFLICLLLIGLLVIPESPIT
                     PIINGAKSWYTFGPISIQPSEFMKIILILALARVVSRHNQFTFNKSFQSDLLLFFKII
                     GVSLVPSILILLQNDLGTTLVLAAIIAGVMLVSGITWRILAPIFITGIVGAMTVILGI
                     LYAPSLIENLLGVQLYQMGRINSWLDPYTYSSGDGYHLTESLKAIGSGQLLGKGYNHG
                     EVYIPENHTDFIFSVIGEELGFIGSVILILIFLFLIFHLIRLAAKIEDQFNKIFIVGF
                     VTLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSMMTGIGIVLSIYYHEPKRYV
                     DLYHPKSN"
     gene            3028..4098
                     /locus_tag="OY092_000911"
     CDS             3028..4098
                     /locus_tag="OY092_000911"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCX1075874.1"
                     /translation="MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT
                     NDGDWRKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGED
                     GTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEH
                     NILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA
                     REIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNM
                     ALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYSELI
                     TKLIELAKERHQDKQKNKYKID"
     gene            4113..5471
                     /locus_tag="OY092_000912"
     CDS             4113..5471
                     /locus_tag="OY092_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HCX1075875.1"
                     /translation="MINVTLKQIQSWIPCEIEDQFLNQEINGVTIDSRAISKNMLFIP
                     FKGENVDGHRFVSKALQDGAGAAFYQRGTPIDENVSGPIIWVEDTLTALQQLAQAYLR
                     HVNPKVIAVTGSNGKTTTKDMIESVLHTEFKVKKTQGNYNNEIGLPLTILELDNDTEI
                     SILEMGMSGFHEIEFLSNLAQPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKDN
                     GTFIYDGDEPLLKPHVKEVENVKCISIGVAADNALVCSVDDRDTTGISFTINNKEHYD
                     LPILGKHNMKNATIAIAVGHELGLTYNTIYQNLKNVSLTGMRMEQHTLENDITVINDA
                     YNASPTSMRAAIDTLSTLTGRRILILGDVLELGENSKEMHISVGNYLEEKHIDVLYTF
                     GNEAKYIYDSGQQHVEKAQHFNSKDDMIEVLTSDLKAHDRVLVKGSRGMKLEEVVNAL
                     IS"
     gene            5987..7507
                     /locus_tag="OY092_000913"
     CDS             5987..7507
                     /locus_tag="OY092_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCX1075876.1"
                     /translation="MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILG
                     QAQTGTGKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVT
                     VFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGF
                     IDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEF
                     YTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQ
                     AKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRA
                     GKEGIAVTFVNPIEMDYIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSK
                     ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSG
                     SRNRNSKRGNPKFDSKSKRSKGYSSKKKSTKKFDRKEKSSGGSRPMKGRTFADHQK"
     gene            complement(7876..8571)
                     /locus_tag="OY092_000914"
     CDS             complement(7876..8571)
                     /locus_tag="OY092_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1075877.1"
                     /translation="MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQI
                     DKPDVILLDLGLPDKDGLCLISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTK
                     PFNVDELRARIRVIERIAKSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSL
                     LELLSNHKGKVLTYEMILKRIYGYVNKTEMPSLRVHMTSLRQKLSQCHEDAKDIIKTH
                     PRIGYQMLQWKEK"
     gene            complement(8571..11228)
                     /locus_tag="OY092_000915"
     CDS             complement(8571..11228)
                     /locus_tag="OY092_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HCX1075878.1"
                     /translation="MSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNV
                     DIKIGYIEPHQRDETNALAEQLPKIATNFTKHGSHHFQYLDVDRIIKESPTIVLIDEL
                     AHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQHIESLSSQIELMTGVHVKERVPDY
                     FIMSADVLEVVDISPEQLIKRLKAGKVYKKDRLDVAFSNFFTYTHLSELRTLTLRTVA
                     DLMSDKEKVRHNHKTSLKPHIAVAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFE
                     KNRQYKDSQKQVHQHLMLAKSLGAKVKVVYSQTVALGLDEWCKNQDVTKLIIGQHIRN
                     KWRDFFNTPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPYRPKGKRFAIDMLKMIL
                     IQIICVMMGLWIYQLDKHESSTIILMIFLIGIILLSIWTRSYIIGFLAAIINVFVFNY
                     FFTEPRYTFEVYRFDYPITFIVSILTSILTSALLKQIKFQYSITKKQLYRTDLLFQFN
                     DSIKQTYTVENLLINAGYQINQLLQQSITVYVINQSKVIKTIPLQNHIDNTTQQHEQA
                     LSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDYQSSQVINPYDASILESM
                     LNELSLAVENVSLLKQTRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSH
                     SKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTKLQSSNVQIKLQPYLVSELVEEID
                     MILERRHLKKRITVSSSVDLQFIHIDSKLILQALFNLIENAVKHTSTDTKINLSIRYA
                     SDEQIEFAVIDEGPGISLEEQQKIFEPFYTGSNKYFKDNQKESMGLGLYLVQTILHKH
                     QSNLQYKPNQPHGSIFYFNIDTDFNEGDI"
     gene            11366..11476
                     /gene="kdpF"
                     /locus_tag="OY092_000916"
     CDS             11366..11476
                     /gene="kdpF"
                     /locus_tag="OY092_000916"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HCX1075879.1"
                     /translation="MLLCCKEVMAMLIVLLLVVIALVLYLFYALIRSEKF"
     gene            11500..13176
                     /gene="kdpA"
                     /locus_tag="OY092_000917"
     CDS             11500..13176
                     /gene="kdpA"
                     /locus_tag="OY092_000917"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HCX1075880.1"
                     /translation="MEIILFLTMMVMITYVFSGYLYRVALVQSSRVDLIFTRFENMCF
                     KIIGTDLEHMSAKTYVKHFLAFNGFMGGISFVLLIVQQWLFLNPNHNLNQSIDLAFNT
                     AISFLTNSNLQHYNGESGVTYLTQMIVMTYLMFTSSASGYAVCITMLRRLTGLTNIIG
                     NFYQDIVRFIVRVLLPLSCLISILLMTQGVPQTLHANLMIRTLSGHIQHIAFGPIASL
                     ESIKHLGTNGGGFLAGNSATPFENPNIWSNFIEMGSMMLLPMSMLFLFGRMLSRHGKR
                     VHRHALILFVAMFFIFIAILTLTMWSEYRGNPILANLGIYGPNMEGKEVRFGAGLSAL
                     FTVITTAFTTGSVNNMHDSLTPLGGLGPMVLMMLNVVFGGEGVGLMNLLIYVLLTVFI
                     CSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILSLVFSALAFMIPGASESITNPSFH
                     GISQVMYEMTSAAANNGSGFEGLKDDTTFWNISTGIIMLLSRYIPIILQLMIASSLVN
                     KKSYHQDKYTIAIDKPYFGVSLIVFIVLLSGLTFIPVLLLGPIGEFLTLK"
     gene            13195..15222
                     /gene="kdpB"
                     /locus_tag="OY092_000918"
     CDS             13195..15222
                     /gene="kdpB"
                     /locus_tag="OY092_000918"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000546595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HCX1075881.1"
                     /translation="MHHVNKYFNQTMVIEALKMSFYKLNPKQLIKNPIMFVVEVGMIL
                     TLILICFPDIFGTSYLSRGYLITIFIILLITILFANFSEAFAEGRGKAQADSLRQAQS
                     NLTARLIEENGAYRIVNATELKAGQNIRVENGETIPADGVVINGLATVDESAITGESA
                     PVIKESGGDFDGVIGGTLVTSDWLEIRVESEAGTSFLDKMIALVEGAERNKTPNEIAL
                     FTLLTTLTIIFLVVIETLYPIASYLHLILPIAMLIALTVCLIPTTIGGLLSAIGIAGM
                     DRVTQFNVLAKSGRAVEVCGDVDVMILDKTGTITYGNRIASEFLPVNQQMLEKLIVAA
                     YMSSIYDDTPEGKSIVRLAKQMYINELPKDIDGTYKPFTAETRMSGIITNEISVFKGA
                     PNSMINLVKQQQGNIPLNIESLCMDVSSKGGTPLIVIENNVMLGVIYLKDVIKDGLVE
                     RFTELRKMGIETVMCTGDNALTAATIAKEAGVDRFVAECKPEDKIKVIKDEQAKGHIV
                     AMTGDGTNDAPALAQANIGLAMNSGTISAKEAANLIDLDSNPTKLIEVVKIGKQLLMT
                     RGALTTFSLANDVAKYFAILPALMMSTIPEMTSLNIMHLSSPKSAIISALIFNALIIV
                     ALIPIAMKGVKVKGYSIDRIFINNMLIYGLGGLIVPFLGIKLIDMIVQFFV"
     gene            15242..15802
                     /locus_tag="OY092_000919"
     CDS             15242..15802
                     /locus_tag="OY092_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HCX1075882.1"
                     /translation="MNTIRNSICLTIITIVLCGFLFPLAITLIGQIFFYQQANGSLIT
                     YDNRIVGSKLIGQHWTERRYFYGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNNELIA
                     RVKHHVKFGNSNVTIDAATSSGSGLDPHITVENALKQAPRIADVRHISTSRVADLIQH
                     RKQRGVLTNDYVNVLELNIALDNMKD"
     gene            16011..16490
                     /locus_tag="OY092_000920"
     CDS             16011..16490
                     /locus_tag="OY092_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075883.1"
                     /translation="MSDYTKLSKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFE
                     WPHYLLYILLVLGALSTLKLFIKPLWQYHCRFYQVDQLSVQYRTSFLIYKEETSRIER
                     LQYLSIKSNPISKVLNLYKVGFMTAGHTINLPMMSHDDVKIIEARAMSNLRGVESDV"
     gene            16483..18066
                     /locus_tag="OY092_000921"
     CDS             16483..18066
                     /locus_tag="OY092_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HCX1075884.1"
                     /translation="MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPE
                     SYLWIGIVFVFFLISYISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVD
                     MTQGVVNQIIGGVDLQIKTPSDGIVLSVISKKQGEYLERYIDQLQTELKTEGAQKSSA
                     EKNDNCNHDIEGNVEDIAEGRLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGA
                     IGVTLAALVPIYGAVRELIPWSKLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIIT
                     MIRFYGFSVMLENEQLKIEYGLFNKKKVTVPTRRLQAVVERQSYIRRIFGYTAIHFII
                     TSDFENKKIEDDDNDSGSVTILPFIKRDKAYQIIQNLVPDLSYQQVNEGMPFSGFHRH
                     FLMPSIIVIAMAGIGCYFWNQLLLLFTIITIVIIGLFVIKGYLYVKHAGFKMTEEQIT
                     IQNFELLKRNIYYFKAHHIIGFDTWQHTLLKRNNLNNFSFIVAKGVGAQSINLKYARS
                     EDANKLKSWYLRGENDEGL"
     gene            18053..18544
                     /locus_tag="OY092_000922"
     CDS             18053..18544
                     /locus_tag="OY092_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HCX1075885.1"
                     /translation="MRDYNFMSPHAKKVMRLSAVMFWIPIALVLLIAFNILNWLFWEI
                     LDNYISIVSSVIIILLVAVFTLVIAPVYRYKHCRYAFEKHHLRVRNGILFLDEKVIPY
                     FRIQNIDIDVGPIMRRYRLATLTLFTAGGQAEIELIDRSEARRLKRWLNNERHLENNK
                     NEE"
     gene            18548..18907
                     /locus_tag="OY092_000923"
     CDS             18548..18907
                     /locus_tag="OY092_000923"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HCX1075886.1"
                     /translation="MIHGIGVDLIEIDRIKALYSKQPKLVERILTKNEQHKFNNFTHE
                     QRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDELGKPKIDYEGFIVHVSIS
                     HTEHYAMSQVVLEKSAF"
     gene            18973..20121
                     /gene="alr"
                     /locus_tag="OY092_000924"
     CDS             18973..20121
                     /gene="alr"
                     /locus_tag="OY092_000924"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCX1075887.1"
                     /translation="MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYG
                     LGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVA
                     LTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQL
                     VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAI
                     RPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTT
                     IALLPIGYADGYLRIMQGSFVNVNGHQCEIIGRVCMDQTIVKVPNQVKAGDSVILIDN
                     HRESPQSVEVAAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK"
     gene            20206..20376
                     /gene="mazE"
                     /locus_tag="OY092_000925"
     CDS             20206..20376
                     /gene="mazE"
                     /locus_tag="OY092_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HCX1075888.1"
                     /translation="MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDC
                     NESYLSSNSTNE"
     gene            20373..20735
                     /locus_tag="OY092_000926"
     CDS             20373..20735
                     /locus_tag="OY092_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HCX1075889.1"
                     /translation="MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVA
                     AITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEV
                     DNALMISLGLNAVAHQKN"
     gene            21084..22085
                     /locus_tag="OY092_000927"
     CDS             21084..22085
                     /locus_tag="OY092_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000390648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HCX1075890.1"
                     /translation="MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPED
                     IVDIHKNYILTLNLTREDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLAS
                     SLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPA
                     ALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCS
                     SAGHEPGYIYRAEKEEFEEISVRGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEA
                     RNSEGTFIDKQKLLEYIKKHKHMHPQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN"
     gene            22205..22531
                     /locus_tag="OY092_000928"
     CDS             22205..22531
                     /locus_tag="OY092_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HCX1075891.1"
                     /translation="MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRD
                     IYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVN
                     EGTEVE"
     gene            22533..23012
                     /gene="rsbW"
                     /locus_tag="OY092_000929"
     CDS             22533..23012
                     /gene="rsbW"
                     /locus_tag="OY092_000929"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001190828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HCX1075892.1"
                     /translation="MQSKEDFIEMRVPASAEYVSLIRLTLSGVFSRAGATYDDIEDAK
                     IAVSEAVTNAVKHAYKEKNNVGIINIYFEILEDKIKIVISDKGDSFDYETTKSKIGPY
                     DKDENIDFLREGGLGLFLIESLMDEVTVYKESGVTISMTKYIKKEQVRNNGERVEIS"
     gene            22987..23757
                     /gene="sigB"
                     /locus_tag="OY092_000930"
     CDS             22987..23757
                     /gene="sigB"
                     /locus_tag="OY092_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HCX1075893.1"
                     /translation="MAKESKSANEVSPEQINQWIKEHQENKNTDAQDKLVKHYQKLIE
                     SLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDK
                     TWSVHVPRRIKEIGPRIKKVSDELTAELERSPSISEIADRLEVSEEEVLEAMEMGQSY
                     NALSVDHSIEADKDGSTVTLLDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCT
                     FIEGLSQKETGERIGLSQMHVSRLQRTAIKKLQEAAHK"
     gene            24192..26342
                     /locus_tag="OY092_000931"
     CDS             24192..26342
                     /locus_tag="OY092_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HCX1075894.1"
                     /translation="MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQT
                     GGLDEVQIKQIDDEYQYMVNLQKRKEEVIKNIEQQGLLTEELKNDILKQNKLQRVEDL
                     YRPFKQKKKTRATEAKRKGLEPLAIWMKARKHEVSIEEKAQQFINEEVQSVEDAIKGA
                     QDIIAEQISDNPKYRTKILKDMYHQGVLTSSKKKNAEDEKGIFEMYYKYSEPIKRIAN
                     HRVLAVNRGEKEKVLSVKFEFDTTTVEDFIARQEINHNNVNRSYILEAIKDSLKRLIV
                     PSIEREIHADLTEKAENHAIDVFSENLRNLLLQPPMKGKQILGVDPAFRTGCKLAVIN
                     PFGTFIAKGVIYPHPPVSKKEAAEKDFVQMVKAYDVQLIAIGNGTASRETEHFVADLI
                     KKHQLPVQFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKID
                     PKSIGVGQYQHDVNQKALENALTFVVETAVNQVGVDVNTASSSLLQYVSGLSSQIAKN
                     IIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEPLDNTSIHPESYKVTY
                     QLLDKLGFGGNDLGSDALKAKLNSLDMDELAIELQVGVPTLEDIIKSLKAPNRDPRDE
                     FETPILKSDVLSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKN
                     PMDIVSVGDIVDVWIYSIDKNKDKVSLTMIDPHE"
     gene            26335..26790
                     /locus_tag="OY092_000932"
     CDS             26335..26790
                     /locus_tag="OY092_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HCX1075895.1"
                     /translation="MNNDKLQRMVENLSEEKFGRTFQHRAYFNKRLRTTGGRYLLKSH
                     DIEINPKQYEHYGEDAVVKIILHELCHYHLHIAGKGYQHKDRDFKRLSQQVGAPRFCN
                     SIESYQQRANYEYYCTKCHAKYIRIRKVDTTRMRCGHCNGKLRMKKQLK"
BASE COUNT         9658 a         3712 c         5055 g         8721 t
ORIGIN      
        1 tcatttttta aagcagctaa ttgctcatca acgattaact ctaatccttt tttatcttcc
       61 ttatcaattt tgaaaatttg gtcacgttga atttgtcgtc ctaatagtaa gtataaaatg
      121 aagccgaata aaggcaagaa aactaagact agtaaccaag cccagataga attggcagaa
      181 cgtctttcca tgaaaataat ggtaaaggcg aataataagt ttaaaataaa tgcaccaata
      241 aatattgaat ttaaaataat attagaatgc ttgagtgcaa tggataataa ctctatcatt
      301 tgaaacctcc catcgaaaat cttaaacgag tagtatatct tattaattgt atcatgaagc
      361 aatttaaata tcatgacaat ttagtttgaa aaacacactt tgtgttgacg ttgtgtttta
      421 tgggatatag tatagtaagg aatgtaaatg aaggagtgaa tgctatgact gaacaagata
      481 ttgcacatca ttctgaacaa ataaaaacga atcttaaatc acgtttaaat cgaattgaag
      541 gacaagtgag agcgattaat cgcatgattg aagaagatgt ctattgtgat gatgtcctta
      601 cgcaaataag agcgacacgt tcggcgttaa acagtgttgc gacaaagtta ttagaacaac
      661 atatgaaaag ttgtattatg aataaagtta atcaaggtgc tcaggaagag gcaatggaag
      721 agttattagt gacttttcaa aaattgatta aagactaaag gagtttaaga tgatacatca
      781 aaatacgatt tacacagcgg gaattgaaac agaagaacaa gtaagtcaat tgacagaacg
      841 catttcaaat atgataggtg ttcatcaagt gaatattaat ataatagacg gtcaagtaac
      901 tgtatcgtat gagacaccag caaatttgaa tagtattgaa aaagaaatct atgatgaagg
      961 atacaaaatt gtattttagg gtataatgta gagtgcgcta tagattttaa ttttgaaaat
     1021 aaattaaaaa ttttgtaaat gatgtagtaa aggtatgtcg aatagggtaa gataatattg
     1081 aaagcgatcc aaacgaggtg ataataatga aacgtcctga aaagattcaa aatgtagtca
     1141 aactattgtc atcattaggt gtgaatatta aaaaaactaa atctcgttta gacattatta
     1201 atactttgcc agcatctaat aaagtaagtc acgaattaaa ataattgact gtgattgtga
     1261 atcacacacc gttaaagcta tcgtcggact attcgatgat agcttttttg actggattta
     1321 ctaaaatgat agcaagtact atataacaaa atccctcttt agagtgtaca ttttacaatg
     1381 tgtacttcaa agagggattg ttattatcga gtaatatcta tatatgacat tttaaatcga
     1441 cgacataaat agactatata acgtcatctt gaaaagttat gatatttgaa actcaaaata
     1501 gtttaaatta attacttttt ggatggtata aatctacata tcgttttggt tcatgataat
     1561 aaattgataa gactatacct attccagtca tcatactcca tagcgcacta ccaccataac
     1621 taataaatgg taatggaata ccagtgattg gtaacaactg aattgtcata ccaatatttt
     1681 gtaaaatatg gaacacaagt aaagtgacga aaccaacgat aaagattttg ttaaattgat
     1741 cttcaatttt cgcagctaat cttattagat ggaagattaa aaataaaaat attaagatca
     1801 atatgacaga accgataaaa ccaagttcct ctccaatcac tgaaaagata aagtcagtat
     1861 gattttcagg tatataaact tcaccgtgat tgtatccttt acctagtaac tgtccagaac
     1921 cgatagcttt aagtgattca gttaaatgat agccatcacc actactatat gtataggggt
     1981 caagccatga attgattcgt cccatttgat acagttggac acctaataaa ttttcaatta
     2041 atgaaggtgc atatagaata cctaaaatga ctgtcattgc accaacaata cctgtaataa
     2101 agataggtgc taagatacgc catgttattc cacttactaa catcacacct gcaataatag
     2161 cagctaatac taatgtagtt cctaggtcat tttgcagtaa tattaaaata cttggtacta
     2221 acgagacacc aataattttg aaaaataata acaaatcact ttggaatgat ttattgaatg
     2281 tgaattgatt atgtctagaa acgacacgcg ctaatgctaa aattaaaata attttcatga
     2341 attcagatgg ctgaatactg atagggccaa acgtgtacca acttttggca ccattgataa
     2401 taggtgtaat aggtgactca ggaataacga gcaagcctat taataataga cagattaaga
     2461 aatacaataa atatgtataa tgtttaatct ttttaggtga aataaacatg atgatacctg
     2521 caaaaattgc acctaaaatg taataaaaaa tttgtctgat accgaaatta gcactgtatt
     2581 gaccaccgcc cattgccgag ttaataagca gaacactgaa aattgctaaa acagctatag
     2641 tggctactaa tacccagtct actttgcgaa gccaatgctt atccggctgt tgacgagatg
     2701 aataattcat tgcaaactcc ttttatactc actaatgttt atatcaattt tacatgactt
     2761 tttaaaaatt agctagaata tcacagtgat atcagctata gatttcaatt tgaattagga
     2821 ataaaataga agggaatatt gttctgatta taaatgaatc aacatagata cagacacata
     2881 acgcctcgtt tttaaaatgc aaaatagtat taaaatgtga tactattaag attcaaagat
     2941 gcgaataaat caattaacaa taggactaaa tcaatattaa tttatattaa ggtagcaaac
     3001 cctgatatat cattggagga aaacgaaatg acaaaagaaa atatttgtat cgtttttgga
     3061 gggaaaagtg cagaacacga agtatcgatt ctgacagcac aaaatgtatt aaatgcaata
     3121 gataaagaca aatatcatgt tgatatcatt tatattacca atgatggtga ttggagaaag
     3181 caaaataata ttacagctga aattaaatct actgatgagc ttcatttaga aaatggagag
     3241 gcgcttgaga tttcacagct attgaaagaa agtagttcag gacaaccata cgatgcagta
     3301 ttcccattat tacatggtcc taatggtgaa gatggcacga ttcaaggact ttttgaagtt
     3361 ttggatgtac catatgtagg aaatggtgta ttgtcagctg caagttctat ggacaaactt
     3421 gtaatgaaac aattatttga acatcgaggg ttaccacagt taccttatat tagtttctta
     3481 cgttctgaat atgaaaaata tgaacataac attttaaaat tagtaaatga taaattaaat
     3541 tacccagtct ttgttaaacc tgctaactta gggtcaagtg taggtatcag taaatgtaat
     3601 aatgaagcgg aacttaaaga aggtattaaa gaagcattcc aatttgaccg taagcttgtt
     3661 attgaacaag gcgttaacgc acgtgaaatt gaagtagcag ttttaggaaa tgactatcct
     3721 gaagcgacat ggccaggtga agtcgtaaaa gatgtcgcgt tttacgatta caaatcaaaa
     3781 tataaagatg gtaaggttca attacaaatt ccagctgact tagacgaaga tgttcaatta
     3841 acgcttagaa atatggcatt agaggcattc aaagcgacag attgttctgg tttagtccgt
     3901 gctgatttct ttgtaacaga agacaaccaa atatatatta atgaaacaaa tgcaatgcct
     3961 ggatttacgg ctttcagtat gtatccaaaa ttatgggaaa atatgggctt atcttattca
     4021 gaattgatta caaaacttat cgagcttgct aaagaacgtc accaggataa acagaaaaat
     4081 aaatacaaaa ttgactaact gaggttgtta ttatgattaa tgttacatta aagcaaattc
     4141 aatcatggat tccttgtgaa attgaagatc aatttttaaa tcaagagata aatggagtca
     4201 caattgattc acgagcaatt tctaaaaata tgttatttat accatttaaa ggtgaaaatg
     4261 ttgacggtca tcgctttgtc tctaaagcat tacaagatgg tgctggggct gctttttatc
     4321 aaagagggac acctatagat gaaaatgtaa gcgggcctat tatatgggtt gaagacacat
     4381 taacggcatt acaacaattg gcacaagctt acttgagaca tgtaaaccct aaagtaattg
     4441 ccgtcacagg gtctaatggt aaaacaacga ctaaagatat gattgaaagt gtattgcata
     4501 ccgaatttaa agttaagaaa acgcaaggta attacaataa tgaaattggt ttacctttaa
     4561 ctattttgga attagataat gatactgaaa tatcaatatt agagatgggg atgtcaggtt
     4621 tccatgaaat tgaatttctg tcaaaccttg ctcaaccaga tattgcagtt ataactaata
     4681 ttggtgagtc acatatgcaa gatttaggtt cgcgcgaggg gattgctaaa gctaaatctg
     4741 aaattacaat aggtctaaaa gataatggta cgtttatata tgatggcgat gaaccattat
     4801 tgaaaccgca tgttaaagaa gttgaaaatg taaaatgtat tagtattggt gttgctgctg
     4861 ataatgcatt agtttgttct gttgatgata gagatactac aggtatttca tttacgatta
     4921 ataataaaga acattacgat ctgccaatat taggaaagca taatatgaaa aatgcgacga
     4981 ttgccattgc ggttggtcat gaattaggtt tgacatataa cacaatctat caaaatttaa
     5041 aaaatgtcag cttaactggt atgcgtatgg agcaacatac attagaaaat gatatcactg
     5101 tgataaatga tgcctataat gcaagtccta caagtatgag agcagctatt gatacactga
     5161 gtactttgac agggcgtcgc attctaattt taggagatgt cttagaatta ggtgaaaata
     5221 gcaaagaaat gcatatcagt gtaggtaatt atttagaaga aaagcatata gatgtgttgt
     5281 atacgtttgg taatgaagcg aagtatattt atgattcggg ccagcaacat gtcgaaaaag
     5341 cacaacactt caattctaaa gacgatatga tagaagtttt aacaagcgat ttaaaagcgc
     5401 atgaccgtgt attagttaaa ggctcacgtg gtatgaagtt agaagaagtt gtaaatgctt
     5461 taatttcata gaaattagtc gagcgacctt ttacttagaa aatgatttga attaatacta
     5521 aaagattaca aagaagaggt ggttttgtgt gtaaatacaa aattgccttt ttctttttat
     5581 gttaaatcta taaatttgaa actaaatcaa ggttaattct atgtacacac tttatatagg
     5641 aagtagtttg aatgtttata taatatttta caaaaagatg ttgtattata aggtctaatt
     5701 tcacatgtgt ttcagtaaaa tttgttgtga aatgttaacg atatacgtat tttataaaaa
     5761 attttttata atgattattc gaatgatgca taacgcttac atcttatcta atgctagctt
     5821 tttgacaaaa atatgacaat caattaatgt gattctaata aatattcgca aattgcttta
     5881 ttgcgattaa atttttttgg tggtactata tagaagttga tgaaatatta atgaacttat
     5941 atgcaaaagt atattgagaa ataaacaggt aaaaaggaga attattttgc aaaattttaa
     6001 agaactaggg atttcggata atacggttca gtcacttgaa tcaatgggat ttaaagagcc
     6061 gacacctatc caaaaagaca gtatccctta tgcgttacaa ggaattgata tccttgggca
     6121 agctcaaacc ggtacaggta aaacaggagc attcggtatt cctttaattg agaaagtagt
     6181 agggaaacaa ggggttcaat cgttgatttt agcacctaca agagaattgg caatgcaggt
     6241 agctgaacaa ttaagagaat ttagccgtgg acaaggtgtc caagttgtta ctgtattcgg
     6301 tggtatgcct atcgaacgcc aaattaaagc cttgaaaaaa ggcccacaaa tcgtagtcgg
     6361 aacacctggg cgtgttatcg accatttaaa tcgtcgcaca ttaaaaacgg acggaattca
     6421 tactttgatt ttagatgaag ctgatgaaat gatgaatatg ggattcatcg atgatatgag
     6481 atttattatg gataaaattc cagcagtaca acgtcaaaca atgttgttct cagctacaat
     6541 gcctaaagca atccaagctt tagtacaaca atttatgaaa tcaccaaaaa tcattaagac
     6601 aatgaataat gaaatgtctg atccacaaat cgaagaattc tatacaattg ttaaagaatt
     6661 agagaaattt gatacattta caaatttcct agatgttcat caacctgaat tagcaatcgt
     6721 attcggacgt acaaaacgtc gtgttgatga attaacaagt gctttgattt ctaaaggata
     6781 taaagctgaa ggcttacatg gtgatattac acaagcgaaa cgtttagaag tattaaagaa
     6841 atttaaaaat gaccaaatta atattttagt cgctactgat gtagcagcaa gaggactaga
     6901 tatttctggt gtgagtcatg tttataactt tgatatacct caagatactg aaagctatac
     6961 acaccgtatt ggtcgtacgg gtcgtgctgg taaagaaggt atcgctgtaa cgtttgttaa
     7021 tccaatcgaa atggattata tcagacaaat tgaagatgct aatggtagaa aaatgagcgc
     7081 acttcgtcca cctcatcgta aagaagtact tcaagcacgt gaagatgaca tcaaagaaaa
     7141 agttgaaaac tggatgtcta aagagtcaga atcacgcttg aaacgcattt ctacagagtt
     7201 gttaaatgaa tataacgatg ttgatttagt tgctgcactt ttacaagagt tagtagaagc
     7261 gaacgatgaa gttgaagttc aattaacttt tgaaaaacca ttatctcgca aaggccgtaa
     7321 tggtaaacca agcggttctc gtaacagaaa tagtaagcgt ggtaatccta aatttgacag
     7381 taagagtaaa cgttcaaaag gatactcaag taagaagaaa agtacaaaaa aattcgaccg
     7441 taaagagaag agcagcggtg gaagcagacc tatgaaaggt cgcacatttg ctgaccatca
     7501 aaaataattt atagattaag agcttaaaga tgtaatgtct tgagctcttt tttgttttca
     7561 ataattgatt ctctgtagat atcaaagtac taacgtttta aaggttaaat atttgattgg
     7621 attgagatct gtgtgcggtt atatcattct gtttaaatat ggttctccac caaatgtggt
     7681 gggtatataa tttaaagaac tatttttaaa ttaagaataa tcgaacataa ataaacttta
     7741 tgaaatttca gtatcatgtt cttataaaaa acaatagagc attttgctga cactagtgcg
     7801 cgataaataa taagttgaat ataaaaaaga tcactgccaa tcattcgttt aatggcagcg
     7861 atctttttta tttaattatt tctctttcca ctgcaacatt tgataaccaa tgcgtggatg
     7921 tgttttaata atatcttttg cgtcctcatg acattgtgaa agtttttgtc ttaatgatgt
     7981 catatgcact cttaaactag gcatttcagt cttattaaca tagccatata ttcgttttaa
     8041 tatcatctca taagtgagta cttttccttt atgatttgac aatagttcta acaagctaaa
     8101 ttcatttggt gtcaaatgta cctcctgatt attaataaca acagatttgg agccaaagtc
     8161 gatgcttagc aaaccgttag taaatacaat gttagtttct tgatgtgact tagcgattct
     8221 ctcgatgact cgtattcgtg cccgaagctc atcaacatta aaaggtttag tcatatagtc
     8281 attcgcaccg ttatctaaag cttgaataat tgtttgttct tcttgtcttg cacttattac
     8341 aatgatagga atgtcagtat gttgcctgat ttctgaaatc aaacataatc catctttatc
     8401 tggtaaacct aaatctaata aaatgacatc tggtttatca atttgaattt taaagtgtgc
     8461 ttgtgtggca ttgtcggctg tagttacatt gtaataatct aaagttaatg caacatcaag
     8521 taaatgtgtg attgcgtgat catcttcaat tatcaatatt ttagattgca ttatatgtct
     8581 ccttcattaa agtctgtatc tatattgaaa tagaatatac tgccgtgtgg ttggttcggt
     8641 ttatattgta agtttgattg atgtttgtgt aggatagtct gtactaaata taagcctagt
     8701 cccatgcttt ctttttggtt atctttaaaa tatttatttg atcctgtgta aaaaggctcg
     8761 aatatctttt gttgttcttc taaactaatt ccaggtcctt cgtctataac ggcaaattcg
     8821 atttgttcat cgctagcata acgaatagat aaattgattt tggtgtcagt agaagtgtgt
     8881 ttaactgcat tttcaatcaa attgaataaa gcttgtaaaa tcaacttact gtcaatgtgt
     8941 ataaactgta aatctactga ggatgataca gttatacgct tttttaaatg gcgacgttct
     9001 agaatcatat cgatttcttc tactaattca ctaacgagat aaggttgcaa ttttatctga
     9061 acatttgatg actgtaattt tgttaatgat aaaatatttg tcactaatag atataaatac
     9121 tgactttctt gaaaactatg cacaagtaat tgttcttttt ctatgataga catatcttta
     9181 ctatgtgata ctaaaatatc taaatttccc ataattgttg ttaacggtgt acgtatgtca
     9241 tgcgaaattg atcttaaaaa atttgaatgt gtcagttgac gttcagcctg taacatggat
     9301 tctctcgttt gtttaagtaa cgacacattt tcaacggcga gagaaagttc atttaacatt
     9361 gattctaata ttgatgcatc atatggatta atcacttgag aactttggta atcaatggct
     9421 agaatgcctt taatcggaga tgtgccaatt ggtatcaacc atttattaat gcctggaaat
     9481 gtatctgttg ttgcaccagc ttgtctttca tttttaatta cccagcttaa tgcttgttca
     9541 tgctgttgag tcgtattatc gatatggttt tgcaatggta ttgttttaat tactttcgat
     9601 tgattgataa cgtatacagt aattgattgt tgcaataatt gattaatttg gtatccagca
     9661 tttattagta agttttcaac tgtataagtt tgtttaatcg aatcattaaa ttgaaataat
     9721 aaatctgtac gataaagttg ctttttagta atggagtatt ggaatttaat ttgttttaat
     9781 aaagcactcg ttaaaatact tgttaaaatg ctaacgataa atgtaatagg atagtcaaag
     9841 cggtatactt caaatgtata tctaggttcc gtaaaaaaat aattaaaaac aaatacgtta
     9901 ataattgctg ctaaaaagcc aatgatgtag gaccgcgtcc aaatggataa taaaatgatg
     9961 ccgatgagaa aaatcattaa aataatcgta ctagactcat gcttatcaag ttgataaatc
    10021 cacagtccca tcattacaca aattatttga atcaaaatca tttttaacat atctatggcg
    10081 aaacgtttgc ctttaggacg atagggtgat ttgttcattt tcaattcaac aggtatttgt
    10141 ttgattggaa cgatttcgat tttatagcta tgttcaaagg acattaaatg gtcaattaaa
    10201 ggtgtattga aaaagtctcg ccacttattt ctaatatgtt gtccgataat taatttggtt
    10261 acatcttgat ttttacacca ttcgtctaat cctaatgcaa cggtttggct ataaactact
    10321 ttcacttttg ctcctaaaga ttttgcaagc atgagatgtt gatgcacttg cttttgacta
    10381 tctttatatt gcctgttctt ttcgaataca tctatataaa tagcagtgaa ttttgcatgt
    10441 tctttttgag caatatggaa tgcctcttta attactgctt cattataaat gctcccacta
    10501 attgccacag caatatgagg tttgagtgac gttttatgat tgtgtcggac tttttcttta
    10561 tcactcatca agtcggcaac tgttcttaac gtcaatgtac gcagttcgct taggtgggta
    10621 tacgtaaaga aattactaaa tgctacatct agcctatcct ttttatatac cttgccagct
    10681 tttaagcgct taattaattg ttcaggtgag atatctacga cttctaatac atcggcgctc
    10741 attatgaaat agtcgggtac acgttcttta acatgtacac cggtcatcag ttcaatttga
    10801 ctacttaaac tttcgatatg ttgaatgttc aaagtagtat gaacatcgat accatgattt
    10861 aaaatttctt caatatccat atatcgtttc tcatgacgat ctctagaaat gttcgtatgt
    10921 gctaactcat cgataagtac tattgtcggc gattctttga ttatgcggtc gacatctaaa
    10981 tattgaaaat gatgactacc atgtttagta aaattggttg cgattttagg taattgttca
    11041 gctaatgcat ttgtttcatc acgttgatgc ggttcaatat atcctatttt aatatcaacg
    11101 ttactttgaa atagttcaat ggcatttgaa agcatctcaa atgttttacc aacacctgga
    11161 ctgtaaccga tgtaaattgt taaagatcca cgcttttttc ctatgtttag cgattcagtg
    11221 tttgacataa ccttcacctc gatagcaata tcataatatt cttcacaatt aaatgctata
    11281 aaatttattt ctgcatacac atcttaatga tttcttaata actaagtttg aaaattaata
    11341 tttctctcat aaacaagttg ttacgatgtt gttgtgttgt aaggaggtta tggcaatgct
    11401 catcgtttta ttattggtag ttattgcatt agttttgtat ttattttatg ccttaattcg
    11461 tagtgaaaaa ttttagaaat atattaagtg agggttatca tggaaataat tttgtttcta
    11521 acaatgatgg ttatgattac gtatgttttt agtggatatt tatatcgcgt agcattggtg
    11581 caatcgtcaa gagtagattt aatatttact agatttgaaa atatgtgttt taaaattatc
    11641 ggcacagatt tagaacacat gtcagctaaa acatatgtca aacattttct ggcatttaat
    11701 ggatttatgg ggggtatatc atttgtattg ctaatagttc agcaatggct ttttttaaat
    11761 ccaaatcata atttaaacca atcgatagat ttagcgttta atacagcaat atctttttta
    11821 acaaatagta atttacaaca ctataacggt gaatcaggtg tgacatattt aacgcaaatg
    11881 attgtaatga catatttaat gtttacatct agtgcatcag gttacgccgt ttgtataacg
    11941 atgttgagac gtttaactgg attgactaat atcattggta atttttatca agatattgtt
    12001 cggtttattg tccgagtact tttaccatta tcatgtttaa ttagtatttt actgatgact
    12061 caaggtgtac cacaaacgtt gcatgctaat ttaatgatta ggactttaag cggacatatt
    12121 caacatattg catttggacc tattgcatca cttgaatcaa taaaacatct tggtacgaat
    12181 ggtggaggat ttttagcagg aaattctgca acaccttttg aaaatccaaa tatttggagc
    12241 aattttatag aaatgggcag tatgatgtta cttcctatgt caatgttgtt cttatttggt
    12301 cgcatgttaa gtagacatgg taaacgagta catcgtcatg cgctgatatt atttgttgca
    12361 atgtttttca tttttatagc aattcttaca ttaactatgt ggagtgagta tcgtggtaat
    12421 ccaatactag cgaatttagg catttatgga ccgaatatgg aaggtaaaga ggtacggttt
    12481 ggagcaggct tgtcagcact atttacagtt attacgacgg catttacaac gggttctgtt
    12541 aataacatgc atgatagctt aacgcctcta ggtggattag gaccaatggt attaatgatg
    12601 ctaaatgttg tatttggtgg cgaaggcgta ggactcatga atttattgat atatgtctta
    12661 ctgacggtgt ttatatgcag tttgatggtt ggtaaaacac cagaatattt aaatatgcca
    12721 attggcgccc gtgaaatgaa atgtattgtc ttagtctttc tcatacatcc aattttaagt
    12781 ttagtatttt cagcacttgc ttttatgatt cctggagcaa gtgaaagtat aacgaatccg
    12841 tcttttcatg gtatctcaca agttatgtat gaaatgacgt cagctgcagc gaacaatgga
    12901 tcagggtttg aaggactgaa agatgataca acattctgga atatctctac aggaatcatt
    12961 atgttgcttt ctcgttatat accaattatt ttgcaattaa tgattgcatc aagtttagtg
    13021 aataaaaaat cataccacca agataaatat acaatagcga ttgataaacc ttattttggc
    13081 gtatcactaa tcgtatttat cgttttacta agtggtttga catttattcc agtactatta
    13141 cttggtccta ttggtgaatt tttaacttta aaataaagta aagggatgga aaaaatgcat
    13201 catgtaaata aatatttcaa tcaaacaatg gtgatagaag ctttgaaaat gagtttttat
    13261 aagctgaatc ctaaacaatt aataaaaaat ccgataatgt ttgtcgttga ggttggaatg
    13321 attttaacgt tgatattaat atgttttcct gacatatttg gaactagcta tctatcgcga
    13381 ggttatttga ttacaatttt tatcatatta ttaataacta tattgtttgc taatttttca
    13441 gaagcctttg ctgaaggtcg tggaaaagcg caagctgata gtttaagaca agcacaatca
    13501 aatttaactg ctcgattgat agaagaaaat ggtgcgtatc ggatagtgaa cgccacagag
    13561 ttaaaagccg gacaaaatat tcgggtagaa aatggagaaa caatccctgc tgatggcgtt
    13621 gtaataaatg gattagcaac cgttgatgaa tctgcaatta ctggtgagtc tgcacctgtg
    13681 ataaaagaat caggtggcga ttttgatgga gtcattggcg gtacacttgt aacatctgat
    13741 tggttagaaa tacgtgttga gagtgaagcg ggtacatctt ttttagataa aatgattgcc
    13801 ttagttgaag gggcggaaag aaataaaaca ccaaatgaaa ttgcactttt tacattatta
    13861 acaacgttaa caattatatt tttagtcgtt attgaaacgt tatatccaat agcatcttac
    13921 ctgcatttaa ttttacctat tgcgatgctc attgcgttaa cagtatgttt aataccaacg
    13981 acaatcggtg gtttgttatc ggcgattggt attgcaggca tggatcgtgt tactcaattc
    14041 aatgtattag cgaaaagtgg gcgtgctgta gaagtatgtg gagatgtcga tgtaatgatt
    14101 ttagacaaga cagggacaat cacttatggc aatcgaatcg ctagtgaatt tttaccagtg
    14161 aatcaacaaa tgctggaaaa attgatagtc gctgcttata tgtcatcaat ctacgatgat
    14221 acgccagaag gaaaaagtat tgtacgatta gcgaagcaga tgtatataaa tgagctgcct
    14281 aaagacattg atggcacata taagcctttt acagctgaaa ctagaatgag cggaatcatt
    14341 acaaatgaaa tatcggtatt caaaggtgca cctaatagta tgataaatct tgtcaaacaa
    14401 caacaaggca atattcctct taatattgag tctctctgta tggatgtatc gagtaaaggt
    14461 ggcacaccat taatagtcat tgaaaacaat gtcatgcttg gcgtgattta tttaaaagat
    14521 gtgattaaag atggtcttgt agaacgattt actgaattga gaaaaatggg gattgaaaca
    14581 gttatgtgta cgggtgataa tgctttaaca gcagctacaa ttgcaaaaga agcgggtgtt
    14641 gatagatttg ttgcagagtg taaacccgag gataaaatta aagtcatcaa agatgaacaa
    14701 gcgaaaggcc atattgttgc gatgacagga gatggtacaa atgatgcacc tgcgctagca
    14761 caagcgaata taggattagc tatgaactca gggacaatta gtgctaaaga ggcggccaat
    14821 ctaattgatt tagattcgaa tcctacaaag ttaatagagg ttgtaaaaat aggcaaacaa
    14881 ttattaatga cgagaggtgc attaacgaca tttagtttag ctaatgatgt agcaaaatac
    14941 tttgcaattt tacctgcact aatgatgtca acgattccag aaatgacttc actaaatatt
    15001 atgcatttat cgtcacctaa atctgcaatc atatcagctt tgatattcaa tgcattaatc
    15061 attgttgcct taattccaat tgccatgaaa ggtgtaaaag taaaggggta cagcattgat
    15121 agaattttta taaataatat gttgatttat ggattaggtg gattaatcgt cccgttttta
    15181 ggcattaaat taatagatat gattgtacaa ttttttgtgt aaagaggaag gagcctgtac
    15241 catgaatacg ataagaaata gtatttgttt aacgataata actatagtat tatgtggatt
    15301 tttattcccg ttagctatca cgttaattgg tcaaatattt ttttatcaac aagcaaatgg
    15361 tagtttaatt acgtatgaca atcgtatagt tggatcaaaa ttgattggac agcactggac
    15421 agagagacga tatttttacg ggagaccgag tgcagttgat tataatatga atcctgaaaa
    15481 attatataaa aatggcgtat catcaggtgg aagtaatgaa tcgaatggaa acaacgaatt
    15541 aatagcacgt gtgaaacatc atgttaaatt tggtaattca aatgtaacaa tagatgctgc
    15601 aacaagttct gggtcgggct tagatccgca tattacggtt gaaaatgcat tgaagcaagc
    15661 acctcgtatt gctgatgttc gtcatatatc tacttcaaga gtggccgact tgattcaaca
    15721 tcgtaagcag cgtggtgtgt taacaaatga ttatgtgaat gtgcttgaac taaatattgc
    15781 acttgataat atgaaagatt gaatatagat gaaaggcatc atgttgataa aattataaca
    15841 tggtgtcttt ttagcaattc aagcactttc tgcttaacta aatttttaga tgtaccttta
    15901 ggaagaataa attagcatga aatattccat atgctataat tatcaacata taaaaataaa
    15961 atgaaataga ttataaatcc gtataatttt ttatttgggg agaggggtac atgtcagatt
    16021 atactaagtt gtctaagagt cctaagtcag cattgttgta ttactacatt acgaatggct
    16081 tagaatttat attgagtgta gctgtgtatg tcatttttta ttttatatgg ttaagatttg
    16141 aatggccaca ttacttactt tatattttgt tggttttagg tgctctgagt acattaaaat
    16201 tatttattaa gcctttatgg caatatcatt gtcgctttta tcaagttgat caactaagtg
    16261 tacaatatcg tacatcattt ttaatataca aagaagaaac gagtcgaatt gaacgtttac
    16321 aatacttgtc gattaaatct aatccaatta gtaaagtgct taatttgtat aaagttggat
    16381 ttatgactgc aggtcatact attaatttac cgatgatgtc acatgacgat gttaaaataa
    16441 tcgaagcgag agctatgtcg aatttgagag gggttgaaag tgatgtctga acctcaaaaa
    16501 ttacatccga tttcatattt taatggcata attaatgcta tcaaacaaaa catagtcgtc
    16561 ttttttattt tcattatctt tcaattgaag gattttgatt atacgaatcc cgaatcatat
    16621 ttatggatag gtattgtatt tgtattcttt ttaatatcat acatttctca aattgtcgga
    16681 attatgaaca ctcgttattg gattgaggat aattatttca ttttaacaac aggtattttt
    16741 aataaaaagc gtaaagaatt aaatataaaa cgtattcagt ccgttgatat gacacaaggg
    16801 gtcgtcaatc aaattattgg tggtgtggat ttacaaatca aaacaccaag tgatggtatt
    16861 gtcttaagtg ttatttcgaa aaaacaaggt gaatatcttg aacgatatat tgatcaattg
    16921 caaacagagt tgaagacaga aggggcgcaa aagtctagtg ctgagaagaa tgacaactgt
    16981 aatcatgaca ttgaaggtaa tgtggaagat atcgcagaag gtcgcttaga tgaagtgcag
    17041 aacactgata gtatgcttaa tcagaaaaat aaacgcattc ctatatatca gatgaatttt
    17101 aaagaatcac tatttatggc aatgaccagt ggcgccattg gtgtaacgtt agcagcttta
    17161 gtaccgattt acggcgctgt aagagagttg atcccgtggt cgaagctaaa tcatgagatt
    17221 agtcaatggg ttcaaattgt aagtatttca gtattaatca tcattttact agtattaata
    17281 gtggcatata ttattggaac gattataacg atgataagat tttatggctt ttcggtgatg
    17341 cttgaaaatg agcaacttaa aattgaatat ggtctcttta acaagaagaa agtaactgta
    17401 ccaacgagac gattgcaagc tgttgttgaa cgtcagtcat atatacgaag aatatttggc
    17461 tacacagcaa tacattttat catcacaagt gattttgaaa ataaaaaaat cgaagatgat
    17521 gacaatgatt caggtagtgt gacgatattg ccgtttatta aacgagacaa agcatatcaa
    17581 attatccaga atttagtacc agatttatct tatcaacaag ttaatgaagg tatgcctttt
    17641 tcaggttttc acagacactt tttaatgcct agtattattg tcatagctat ggcaggtatt
    17701 ggctgttatt tttggaatca attattattg ttatttacga ttataacaat agtcattatt
    17761 ggtttatttg tgatcaaagg atatctttat gtcaaacatg cgggttttaa aatgacagaa
    17821 gaacaaatta ctatccagaa tttcgagcta ttgaaacgaa atatttatta ttttaaagcg
    17881 catcacatta taggatttga cacttggcaa catacattac ttaaacgcaa caatttaaat
    17941 aattttagct ttattgttgc taaaggtgtg ggagcccaat cgattaactt aaaatacgca
    18001 agaagtgaag atgcaaataa attgaaatca tggtatttga gaggtgaaaa tgatgaggga
    18061 ttataatttt atgtcaccac acgctaaaaa agtgatgagg ttaagtgctg tgatgttttg
    18121 gataccaata gcgcttgtac ttttaatcgc atttaatatt ttgaactggc tattttggga
    18181 gatattagat aactatatat ccattgttag tagtgtgatt ataatattac ttgttgctgt
    18241 tttcacgctt gttatagcgc cagtctatcg atataagcac tgcagatatg catttgaaaa
    18301 acaccatttg cgtgtacgaa acggcatttt atttttggat gaaaaagtaa taccatattt
    18361 tcgtattcaa aatattgata tcgatgttgg tcctataatg agacgctatc gattagcaac
    18421 tttgacactt tttacagcgg gtggtcaagc tgaaattgaa ttaatagata gaagtgaagc
    18481 acgtagattg aaacggtggt taaataacga gagacattta gaaaacaata aaaatgagga
    18541 ataatcaatg atacatggaa ttggtgtaga tttaatcgaa atcgatcgaa taaaagcgtt
    18601 atatagtaag caaccaaaat tggttgagcg gattttaaca aaaaatgaac agcacaaatt
    18661 caacaatttc acacatgagc aacgtaaaat tgaattttta gctggcaggt ttgctacaaa
    18721 agaagcgttc agtaaagcat taggcacagg cttaggaaaa catgtagctt ttaacgatat
    18781 agactgttac aacgacgaac ttggcaaacc aaagattgat tacgaagggt ttatcgtaca
    18841 tgttagtatc tcacacactg agcattatgc gatgagccaa gttgttttag aaaagtcagc
    18901 attttaaatt tgttatacaa tgataattaa gatttagttt taaaacgtgt gggaattaca
    18961 ggaggaagta atatgtcgga taaatattat agatctgcgt atatgaatgt agatttaaac
    19021 gctgttgcat caaatttcaa agtattcagt acattgcatc caaataaaac agtgatggct
    19081 gtcgttaaag ccaatgccta tggactaggt agtgttaaag tagcacgtca tttaatggaa
    19141 aatggcgcca cattttttgc tgtagcaacg ttagatgaag cgatagaact tagaatgcat
    19201 gggattactg ctaaaatttt agtcttaggt gtgttaccag ctaaagatat tgataaagcg
    19261 atacaacacc gagttgcctt aacggttccg tctaaacagt ggttgaaaga agcaattaaa
    19321 aacatttctg gtgagcaaga gaaaaagtta tggttgcata ttaaattaga tacaggaatg
    19381 ggacgtttag gtattaaaga tactaaaacg tatcaagaag tgattgaaat cattcaacaa
    19441 tatgagcaac ttgtatttga aggcgtgttt acacactttg cctgtgctga cgaaccagga
    19501 gatatgacaa ctgaacaata tcaacgtttt aaagatatgg tcaatgaagc aattaaacct
    19561 gaatatatac attgtcagaa ctcagcaggt tctctattaa tggattgcca attctgtaat
    19621 gcaataagac caggaatttc cctttatgga tattatccat cagagtatgt acagcaaaaa
    19681 gttaaagtac accttaaacc aagtgtgcaa ttaattgcta atgtagttca aacaaagacg
    19741 ctacaagcgg gtgagtctgt aagttatggt gcaacttata cagctactga tccaacaaca
    19801 atagcattgt tacctattgg atatgcagat ggctatttac gcattatgca aggtagcttt
    19861 gtaaatgtaa atggtcatca atgcgaaatt attggtcgcg tatgtatgga tcagacaatt
    19921 gtaaaagtgc caaatcaagt taaagctgga gattcggtga ttttaataga taatcataga
    19981 gaaagtccac agtcggtaga ggtggcagct gagaagcaac atactattaa ttatgaagtg
    20041 ctttgtaact tgtcgagacg tttgccgcga atctatcatg atggtgatca acgttttgta
    20101 acaaatgaat tgttaaaata atatggtcag tgcatataaa atttgttatc attagagtaa
    20161 ttaaaggtca tttaataact tttggaatca attggaggtt ctcatatgtt atcttttagt
    20221 caaaatagaa gtcatagctt agaacaatct ttaaaagaag gatattcaca aatggctgat
    20281 ttaaatctct ccctagcgaa cgaagctttt ccgatagagt gtgaagcatg cgattgcaac
    20341 gaatcatatt tatcttctaa ttcaacgaat gaatgattag acgaggagat gtttatttag
    20401 cagatttatc accagtacag ggatctgaac aagggggagt cagacctgta gtcattattc
    20461 aaaatgacac tggtaataaa tatagtccta cagttattgt tgcggcaata actggtagga
    20521 ttaataaagc gaaaataccg acacatgtag agattgaaaa gaaaaaatat aaattggata
    20581 aagactcagt catattatta gaacaaattc gtacacttga taaaaaacga ttgaaagaaa
    20641 aactgacgta tttatccgat gataaaatga aagaagtaga taatgcacta atgattagtt
    20701 tagggctgaa tgcagtagct catcagaaaa attaggcgtc tattatatgt atttttcaga
    20761 gataaataaa atattgatat aaaagacaat aactttataa taattataac tatttctaaa
    20821 ttctgtgcga agaatttctt ataaattaag attttagcaa ataccagtta tgatattcat
    20881 attttttatt ataaaaggat gtcttaagtt ttttaggctt taggtattcc atcctaaagt
    20941 tttttttagc ttaaaagtat catctacagc aaaattgcaa acgacaaaat tgataagtgc
    21001 aattaaataa atgttagtaa gtgaatcata attatccttg cttaagcatt tgctttgtaa
    21061 gggaagtgag gaggcaacta atcgtggaag aatttaagca acattataag ggtttaattg
    21121 atgaaagttt aacgtgccaa gataaagtag aattgataaa aaagtgtgag aaatacactg
    21181 acgaagtgat tcgtaaggac gtcttgcctg aagacattgt cgatattcac aaaaactata
    21241 tattgacgtt aaacttaacg cgtgaagatg tgttcaagac attagatgtc ttacaagaaa
    21301 tcgttaaagg ctttggttat agttatcgag attatcaaag attggtagat aaacttcaag
    21361 ttcacgataa agagatagac ttagcttcta gcttacaaca aacaatgctt aaaacagata
    21421 ttccacaatt tgatagtatt caaattggcg ttatttcagt ggcagcacaa aaagtaagtg
    21481 gagattattt taatttaatt gaccataacg atggcacaat gagctttgct gttgcagatg
    21541 tcattggaaa aggtatacca gctgctttag caatgagtat gataaagttt ggtatggatt
    21601 cttatggaca ctcacaatta ccgagtgatg gcttaaaacg tttaaatcgt gttgttgaaa
    21661 agaatattaa tcaaaatatg ttcgtcacaa tgttttatgg tttatatgaa gaaatgaacc
    21721 atttattgta ttgtagttca gctggtcatg agcctggata tatttatcgc gctgaaaaag
    21781 aagaatttga agaaatttca gttagaggta gagtgttagg aatcagttca caaacacgat
    21841 atcaacaaca agaaattcca atataccttg atgatttaat tatcatttta acggatggtg
    21901 tgactgaagc tagaaatagt gaaggtacct ttatagataa acaaaaactt ttagaatata
    21961 ttaaaaaaca taaacatatg cacccacaag atattgttca aattatctat gaagcaattt
    22021 taaagcttca aaacccaaat aaaaaagatg atatgactat tttgattata aaaagagtaa
    22081 attaatttta aaaaaaaaga ttagaaatta tttcgatggg tatataataa tttgaaatat
    22141 aaatatggtg gatacagcgc ttaaaatgaa gataaatatt tttaataagt aggagtgtaa
    22201 tgaaatgaat cttaatatag aaacaaccac tcaagataaa ttttacgaag ttaaagtcgg
    22261 tggagaatta gatgtttata ctgtgcctga attagaagag gttttaacac ctatgagaca
    22321 agatggaact cgtgatattt atgttaattt agaaaatgtg agttatatgg attcgacagg
    22381 tttaggttta ttcgtaggta cattaaaagc attaaaccaa aatgataaag aactatacat
    22441 tttaggtgtg tcagatcgta tcggtagact atttgaaatt actggtctta aggatttaat
    22501 gcatgttaat gaaggaacgg aggtcgaata acatgcaatc taaagaagat tttatcgaaa
    22561 tgcgcgtgcc agcatcggca gagtatgtaa gtttaattcg tttaacactt tctggcgttt
    22621 tttcgagagc tggtgctaca tatgatgata ttgaagatgc caagattgca gttagtgaag
    22681 ctgtgacaaa tgcagttaaa catgcataca aagaaaaaaa caatgtgggc attattaaca
    22741 tatattttga aattttagaa gataaaatta aaattgttat ttctgataaa ggtgacagtt
    22801 ttgattatga aacaactaaa tcaaaaatag gtccatacga taaagacgaa aatatagact
    22861 ttttacgcga aggtggccta ggtttatttt taatcgaatc tttaatggat gaagtgacag
    22921 tatataaaga atctggtgtg acaatcagta tgactaagta tataaaaaaa gagcaggtgc
    22981 gaaataatgg cgaaagagtc gaaatcagct aatgaagttt cacctgagca aattaaccaa
    23041 tggattaaag aacaccaaga aaataagaat acagatgcac aagataagtt agttaaacat
    23101 taccaaaaac taattgagtc attggcatat aaatattcta aaggacaatc acatcacgaa
    23161 gatttagttc aagttggtat ggttggttta ataggtgcca taaatagatt cgatatgtcc
    23221 tttgaacgga agtttgaagc ctttttagta cctactgtaa tcggtgaaat caaaagatat
    23281 ctacgagata aaacttggag tgtacatgtt ccgagacgta ttaaagaaat tgggccaaga
    23341 atcaaaaaag tgagcgatga actaaccgct gaattagagc gttcaccttc tatcagtgaa
    23401 atagctgatc gattagaagt ttcagaagaa gaagtgttag aagcaatgga aatgggacaa
    23461 agttataatg cgttaagtgt tgatcattcc attgaagctg ataaagatgg ttcaactgtt
    23521 acgctattag atattatggg gcaacaagat gaccattatg acttaactga aaaacgtatg
    23581 attttagaaa aaatattacc tatattatct gatcgcgaac gagaaatcat acaatgtacg
    23641 tttattgaag gattgagtca aaaagagaca ggtgagcgta tcggtttaag tcaaatgcat
    23701 gtatcacgac ttcagagaac ggcaattaag aaattacaag aagcagcaca taaatagaat
    23761 ttgcttatta atgatacgtt ttataatgaa aaatccatat aattatccct tgattattaa
    23821 attgaaatcg aggggtattt ttaatttaat taaggttttc gaattaatgc gttattaacg
    23881 tagtttaatg tgtatccaca taaatgtcgc gatatagtat taataattta agtgaagaag
    23941 atatctaatt gtcggtttaa ttaagtggat tgctattaga ataaaaaaag taggcttaga
    24001 ttatgaaatt taggaaatga tggtgtgtca ttttcaataa tcttagtgca ttttaaaatg
    24061 ttgtatgacc taataattca tttttaaagt tttggaagtt aaaattgcat taagtatcat
    24121 accttaatag aagtatttta gaatatgtta aaataaatga gtaaatttaa gaaaaagtgt
    24181 gggttaagta aatggacaat caattgatta attcaatcat agagaaatat caatttagta
    24241 aaaaacaaat tgaagcagtg ttaacactgc tagaagaaaa aaatacagta ccatttattg
    24301 cgaggtatcg aaaagagcaa actggtggac tagatgaagt tcaaataaag caaattgatg
    24361 acgaatacca atatatggtc aatttacaaa aacgtaaaga agaagttatc aaaaatatag
    24421 aacagcaagg attacttact gaggaattaa agaacgatat tttaaaacag aacaaattac
    24481 aacgtgttga agacctatat agacctttta aacaaaagaa aaagacaagg gcaactgagg
    24541 cgaaacgtaa agggttagaa ccattagcga tatggatgaa ggcacgtaaa catgaagtct
    24601 caattgaaga aaaagcacaa caatttataa atgaagaagt gcaatcggtt gaagatgcta
    24661 tcaaaggtgc acaagatatt attgcggaac aaatttcaga taatcctaaa tatagaacaa
    24721 aaattttaaa agatatgtat catcaaggtg tgttaacttc atctaaaaag aaaaatgctg
    24781 aagatgaaaa aggtattttt gaaatgtact ataaatatag tgagccaatt aaacgcattg
    24841 ctaaccatag agttttagct gttaatcgtg gtgaaaaaga gaaagtatta tctgtaaagt
    24901 ttgaattcga tacgacaaca gtagaggatt tcattgcacg tcaagaaatc aatcataaca
    24961 atgtaaatcg cagttatatt ttagaggcga ttaaagatag cttgaaacgc ttaattgtcc
    25021 cttcgataga gcgtgaaatc catgctgatt taactgaaaa agctgaaaat catgcaatag
    25081 atgtttttag tgaaaactta agaaatctat tactgcaacc tccaatgaaa ggtaaacaaa
    25141 tattaggcgt agatccagca tttagaacag gttgtaaatt agcagtcatt aacccattcg
    25201 gtacttttat agcaaaaggt gtgatttatc cgcatccacc agtttctaaa aaagaggcag
    25261 cagagaagga ttttgtacaa atggttaaag cgtatgatgt gcaattaatt gcaattggca
    25321 atggtactgc aagtcgtgaa acagaacatt ttgttgcaga tttaattaaa aagcatcagt
    25381 tgccagtaca attcatcatt gtcaatgaag cgggcgcttc agtatactca gcatcagaaa
    25441 ttgctagaga tgaatttcct gattttcaag tggaagaaag aagtgccgta tcaattggac
    25501 gacgcgttca agatccatta agtgaattag ttaaaatcga tcctaaatct attggtgtcg
    25561 gacaatacca gcatgatgtt aatcaaaaag cactagaaaa tgcattaact ttcgttgttg
    25621 aaacagcagt taaccaagta ggtgttgatg tcaatacagc atcatcatca ttattacaat
    25681 atgtgtctgg tctaagttcg caaattgcta aaaatataat tgcatataga gaagaaaatg
    25741 gcgcaataaa gcataataaa gagttaagca agattaagcg tttgggtgct aaaacttttg
    25801 agcagagtat aggattttta agaatagtag acgggtcaga gccattggat aatacatcga
    25861 ttcatcccga aagctataaa gtaacgtatc agttattaga taaactcgga tttggtggta
    25921 atgatttagg tagtgatgca ttaaaagcta aattaaattc attggatatg gatgaactgg
    25981 cgattgaatt acaagtcggt gtacctacat tagaggatat tattaaatcc ttgaaagcac
    26041 ctaatcgaga tccaagggac gagtttgaaa caccaatcct taaatccgat gtgctatcaa
    26101 ttgaagattt aaaagaagga atgaaattga gtggcacggt tagaaatgta gtagattttg
    26161 gagcatttgt agatataggt gttaaacaag atggacttgt ccatgtttcg aaactttcta
    26221 agaagttcgt aaaaaatcca atggatattg tcagtgtcgg tgatatcgtt gacgtttgga
    26281 tttacagtat tgacaaaaat aaagacaaag tatcattaac gatgattgat ccacatgaat
    26341 aatgacaaac ttcagcgaat ggtcgagaac ctttcggaag aaaaatttgg acgtacgttt
    26401 caacatcgtg catattttaa taaaaggtta cgtacaacag gcggacgtta tcttttaaag
    26461 tctcatgata ttgagattaa tccaaaacaa tatgagcatt atggagaaga tgctgttgta
    26521 aaaattatac tgcacgaatt gtgtcattat cacttgcata ttgctggtaa aggttatcag
    26581 cataaagatc gagattttaa acgattgagc caacaggttg gagcacctag attttgtaac
    26641 agcatcgaaa gctatcaaca acgggcaaat tatgaatatt attgcactaa atgtcatgca
    26701 aaatatatac gtatccgtaa agttgatacg actcgtatgc gttgtggaca ttgcaatgga
    26761 aaattaagaa tgaaaaaaca attgaaataa gtacaataca aatagagcta attcatgtat
    26821 atgtaagatt atttatgagt tgtatggaat ttatatagaa tttatcagtg agttattttg
    26881 attggtaaac atagtaattg aataagaaga aattgtgttt ataaaatgtt taaagccgag
    26941 attgtcgtaa tttaatactt cgcaatctcg gcttttctac ttatgatata ggtaatggca
    27001 taaattgtgg cttgatagga tgaaattaaa ttgattagat taaaaatcct ggcgtatttt
    27061 agtaatgaat aatatataaa ctttaccaaa ttaaagcttt aaagtggcat aaaagataat
    27121 tatacatttt taatgacatt ttgatt
//
LOCUS       DAKPJH010000026        26293 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.026, whole genome shotgun sequence.
ACCESSION   DAKPJH010000026 DAKPJH010000000
VERSION     DAKPJH010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 26293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26293
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.026"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..1214
                     /locus_tag="OY092_000933"
     CDS             <1..1214
                     /locus_tag="OY092_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HCX1075896.1"
                     /translation="SEKEKIQLLADIVELQTENNNEIDVCNYLTDLFDKYDIKSEILK
                     VNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWTYPPFQLTEKAGKLYGRGTTDM
                     KGGLMALVITLIELKEQNQLPQGTIRLLATAGEEKEQEGAKLLADKGYLDDVDGLIIA
                     EPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNQFKEKYSELKKH
                     DTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLEFNVR
                     PVPEYDNDFIESFFQNIINDVDSNKLSLDIPSNHRPVTSDKNSKLITTIKDVASSYVE
                     QDDIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKYIDIF
                     KEASIQYLKEK"
     gene            complement(1586..2431)
                     /locus_tag="OY092_000934"
     CDS             complement(1586..2431)
                     /locus_tag="OY092_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1075897.1"
                     /translation="MKQLVGIPESMLIPLIARAKEYENEKPIIKDALSKKIFDGLDDM
                     YKNVTCDDMSQIGISIRTVIIDCVTKRLIKDNKDLIVVNIGCGLDTRFQRFNKEKISW
                     IDLDVPESIEIRKTFFKESNSYKMISKSMLDYSWIDDVKNYKFFNSKSDILFIIEGVL
                     MYFDESVMTQLLDTIIKKMGDHNLTFAIEFCSKTIANNTKRHQSVSKLSSQPVFKYGY
                     NDLKKLNEILPNTIRVIHEYNYFDYYKNRWGLFGYCRFIPYLKKRLNNKIVLMKYKVP
                     KRQRH"
     gene            complement(2493..3404)
                     /locus_tag="OY092_000935"
     CDS             complement(2493..3404)
                     /locus_tag="OY092_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-hydroxamate ABC transporter
                     substrate-binding protein"
                     /protein_id="HCX1075898.1"
                     /translation="MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKV
                     PEKPKRVAVLTGFYVGDFIKLGIKPIAVSDTTKDSSILKPYLKGVDYIGENDVERVAK
                     AKPDLIVVDAMDKNIKKYQKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEW
                     DDKTRKDKKEIQSKIGQATASVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKD
                     KLQEDKKGYASISKENISKYAGDYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYK
                     AEDYWFTDPITLEHLRSKLKKEILNKK"
     gene            3565..4872
                     /locus_tag="OY092_000936"
     CDS             3565..4872
                     /locus_tag="OY092_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HCX1075899.1"
                     /translation="MNKVHKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFI
                     ASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNR
                     FLIMVTWNIDELGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTS
                     VSAFNNAGFALFKNNLIDYSSDPIVIITISILIIFGGIGHFVVIDFINCKKLSKLSLH
                     SKLVLTTTSILIIIGAITFFLLEQFNTMQHMGLVEKIGNSFFQSVTTRTAGFNSIDIA
                     SINKSTALMLMLLMFIGGAPLSAAGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISD
                     KHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYH
                     GITKIIIIFVMLCGKVGLLTLLRTFIPPKNPKNYRYTKGQIYL"
     gene            complement(5715..6158)
                     /locus_tag="OY092_000937"
     CDS             complement(5715..6158)
                     /locus_tag="OY092_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1075900.1"
                     /translation="MSIITRLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITN
                     HDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADS
                     EEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSGFTKQL"
     gene            complement(6264..6701)
                     /locus_tag="OY092_000938"
     CDS             complement(6264..6701)
                     /locus_tag="OY092_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075901.1"
                     /translation="MFISLAIWSINSMGNKQCISLNLLLSDDTFAVISVMTTLGTAIL
                     GGIAPSIYGIFTSPIDKKSSFRAISDWEQEQRNNVKDLMMLLPSTLLSILIVIFIFQF
                     AYSKLFNTIAIIIFIIILVVMFFLILLICYKITVMICRYFSKE"
     gene            complement(7019..7609)
                     /locus_tag="OY092_000939"
     CDS             complement(7019..7609)
                     /locus_tag="OY092_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HCX1075902.1"
                     /translation="MSELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLK
                     KPHIKQYIQEQKDKIIDENVLTAKELLHVLTNATVGDETETKEVVVKRGEYKENPQSG
                     KVQLVYNEHVELIEVPIKPSDRLKAREMLGKYHKLFTDKHDINGNVPIFINIGEWDGG
                     DEGLDKAVKDVSNDNPNHTVIVDDIPLEDYESIRFL"
     gene            complement(7606..7818)
                     /locus_tag="OY092_000940"
     CDS             complement(7606..7818)
                     /locus_tag="OY092_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island family protein"
                     /protein_id="HCX1075903.1"
                     /translation="MTDDNVNDHIIKNHIEMIVDRLATDKEFYIFDSLIQGLSYQDIS
                     SALDCSEQSVILWYETILDKIVGVIK"
     gene            7879..8425
                     /locus_tag="OY092_000941"
                     /pseudo
     CDS             7879..8425
                     /locus_tag="OY092_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002476300.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(8520..10136)
                     /gene="groL"
                     /locus_tag="OY092_000942"
     CDS             complement(8520..10136)
                     /gene="groL"
                     /locus_tag="OY092_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500736.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HCX1075904.1"
                     /translation="MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFT
                     APLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEG
                     LKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYI
                     SEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYI
                     LVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKA
                     PGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGD
                     GDENSIDSRVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIETGVNIVLKALTAPVRQ
                     IAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVA
                     AMFLTTEAVVASIPEKNNDQPNMGGMPGMM"
     gene            complement(10212..10496)
                     /gene="groES"
                     /locus_tag="OY092_000943"
     CDS             complement(10212..10496)
                     /gene="groES"
                     /locus_tag="OY092_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HCX1075905.1"
                     /translation="MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGT
                     GRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE"
     gene            10673..11416
                     /locus_tag="OY092_000944"
     CDS             10673..11416
                     /locus_tag="OY092_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HCX1075906.1"
                     /translation="MTRLWASLLTVIIYLLSQFLPAVIVNTTQFAQYSDLEQLKAGIY
                     IQLVLFLIAATTIIFINFKIKDPTRLESEVKEPNKYIIPWALLGFALVMVYQFIVSIV
                     LTQIYGGQQVSPNTEKIIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGS
                     RIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRIAVPIIIHMLQNG
                     FVVIFQLLNPEALKKATEQANFIYHIFIP"
     gene            complement(11440..12699)
                     /locus_tag="OY092_000945"
     CDS             complement(11440..12699)
                     /locus_tag="OY092_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075907.1"
                     /translation="MSYHWFKKMLLSTSILILSSSSLGLATHTVEAKDNLNGEKPTTN
                     LNHNITSPSVNSEMNNNETGTPHKSNQTGNEETGSNSRDANPDSNNVKPDSNNQNPSP
                     DSKPDSNNQNPSPNPKPNPDNPKPKPDPKPDPDKPKPNPDPKPDPDNPKPNPDPKPDP
                     DKPKPNPDPKPDPDKPKPNPNPKPDPNKPNPNPSPDPDQPGDSNHSGGSKNGGTWNPN
                     ASDGSNQGQWQPNGNQGNSQNTTGNDFVSQRFLALANGAYKYNPYILNQINKLGKDYG
                     EVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYFNPLKSERYYRNLDEQVLALIT
                     GEIGSMPDLKKPEDKPDSKHRSFEPHEKDDFTVVKKQEDNKKSASTAYSKSWLAIVCS
                     MMVVFSIMLFLFVKRNKKKNKNESQRR"
     gene            12896..13522
                     /locus_tag="OY092_000946"
     CDS             12896..13522
                     /locus_tag="OY092_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HCX1075908.1"
                     /translation="MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHA
                     VKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSY
                     GTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYN
                     PLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKTFNPVEDRFVIKK"
     gene            13792..14577
                     /locus_tag="OY092_000947"
     CDS             13792..14577
                     /locus_tag="OY092_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HCX1075909.1"
                     /translation="MKVQIYQLPIIFGDSSKNEIQITQWFEKNMNAEVDVVVLPEMWN
                     NGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSG
                     QLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSNGTYVTQLICYDLRFPELLRYPAR
                     SGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINP
                     NGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK"
     gene            complement(15176..15310)
                     /locus_tag="OY092_000948"
     CDS             complement(15176..15310)
                     /locus_tag="OY092_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="delta-lysin family phenol-soluble modulin"
                     /protein_id="HCX1075910.1"
                     /translation="MSCLILRIFILIKEGVISMAQDIISTIGDLVKWIIDTVNKFTKK
                     "
     gene            15546..16115
                     /gene="agrB"
                     /locus_tag="OY092_000949"
     CDS             15546..16115
                     /gene="agrB"
                     /locus_tag="OY092_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator AgrB"
                     /protein_id="HCX1075911.1"
                     /translation="MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAKNIGKLI
                     VMYTLAYILNIFLFTLITNLTFYLIRRHAHGAHAPSSFWCYVESILLFILLPLVIVNF
                     HINPLIMIILTVISLGIISVYAPAATKKKPIPVRLIKRKKYYAIIVSLTFFIITLIIK
                     EPFAQFIQLGIIIEAITLLPIFFIKEDLK"
     gene            16112..16252
                     /locus_tag="OY092_000950"
     CDS             16112..16252
                     /locus_tag="OY092_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HCX1075912.1"
                     /translation="MNTLFNLFFDLITGILKNIGNIAAYSTCDFIMDEVEVPKELTQL
                     HE"
     gene            16277..17569
                     /locus_tag="OY092_000951"
     CDS             16277..17569
                     /locus_tag="OY092_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HCX1075913.1"
                     /translation="MELLNSYNFVLFVLTQMILMFTIPAIISGIKYSKLDYFFIIVIS
                     TLSLFLFKMFDSASLIILTSFIIIMYFVKIKWYSILLIMTSQIILYCANYMYIVIYAY
                     ITKISDSIFVIFPSFFVVYVTISILFSYIINRVLKKISTPYLILNKGFLIVISTILLL
                     TFSLFFFYSQINSDEAKVIRQYSFIFIGITIFLSILTFVISQFLLKEMKYKRNQEEIE
                     TYYEYTLKIEAINNEMRKFRHDYVNILTTLSEFIREDDMPGLRDYFNKNIVPMKDNLQ
                     MNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIG
                     IILDNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEG
                     RGLGLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN"
     gene            17588..18304
                     /locus_tag="OY092_000952"
     CDS             17588..18304
                     /locus_tag="OY092_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000688500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1075914.1"
                     /translation="MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVL
                     EQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKV
                     AAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
                     FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKER
                     IVYFKNKEHCYASVRNVKKI"
     gene            18376..18483
                     /locus_tag="OY092_000953"
     CDS             18376..18483
                     /locus_tag="OY092_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075915.1"
                     /translation="MHCIAGFLILIAKLNMTRELKNDVTSLCIPIPITT"
     gene            complement(18672..19631)
                     /locus_tag="OY092_000954"
     CDS             complement(18672..19631)
                     /locus_tag="OY092_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HCX1075916.1"
                     /translation="MRRLFSIGEALIDFIPNITNANLKDVQTFTKQIGGAPCNVACTV
                     QKLGQQAYMITQLGNDAFGDSIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERD
                     FSFYRKPSADMLFEPSFVNDIDVNENDVVHFCSVDLIDSPMREAHYQLITKTLNANGT
                     VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIVKVSDEELEFITGIHDENKAIQSLFTG
                     NVTVVIYTKGADGAAVYLKNGINHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLN
                     LTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF"
     gene            complement(19628..21112)
                     /locus_tag="OY092_000955"
     CDS             complement(19628..21112)
                     /locus_tag="OY092_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HCX1075917.1"
                     /translation="MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETG
                     LLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKAEGPILNPDTKYD
                     SHGVYSGSAFEFNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGSVEKFPKPVISQQP
                     EGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDF
                     GYMWECPDYFNVDNQDVILICPQGIEPKGDQFKNIYQSGYILGKFDIEKLTYEHENFV
                     ELDNGFDFYAPQTFLDEKGRRVLIGWMGLPEIEYPTDNEGWAHCLTIPRVLNVENGQL
                     KQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTS
                     KTSSTLIAYNKRENKIILDRSDSGLLPTNVEGTTRSTILETPLKQLQIFVDTSSIEIF
                     CNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK"
     gene            complement(21261..22211)
                     /locus_tag="OY092_000956"
     CDS             complement(21261..22211)
                     /locus_tag="OY092_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCX1075918.1"
                     /translation="MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTKIIAEHDY
                     QPNQFAQSLRARQTHLIGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEA
                     EIQALETLARSKVDGIVLMATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKA
                     GQIIGEWIGQQGYQQIEVFSVSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVE
                     AQKDVANVLENVEQVDAVVGATDTIALAAYKYYSDKKEVMKPHQIYGFGGDPMTQLVS
                     PSIKTIHYNYFEAGQCAMEEIQQMLKKQDMPYSVTVDVNI"
     gene            complement(22394..23644)
                     /locus_tag="OY092_000957"
     CDS             complement(22394..23644)
                     /locus_tag="OY092_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HCX1075919.1"
                     /translation="MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSM
                     AAIVLVTFVWITVGFTISFGEGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQ
                     MMFCTIAISILSGSIAEKMKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFA
                     GGTVVHITSGVSGLVLAIMIGKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFT
                     FDQIAMLAFTNTVISASAGAIGWLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVT
                     YLSATIMALIGGICCYIVINYIKVKLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKAN
                     PDIENGFIYTGDIHIILVQILCVTAVVIFSIVMTFIIAKVIKLITPLSVTEQETNIGL
                     DKIVHGEHAYFEGELNRFNKHIRY"
     gene            complement(23852..24076)
                     /locus_tag="OY092_000958"
     CDS             complement(23852..24076)
                     /locus_tag="OY092_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HCX1075920.1"
                     /translation="MIHELGTVGMVCPFPLIEAQKKMATLQSGDELKIDFDCTQATEA
                     IPNWAAENGYPVTNYEQIDNASWTITIQKV"
     gene            complement(24141..25217)
                     /locus_tag="OY092_000959"
     CDS             complement(24141..25217)
                     /locus_tag="OY092_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HCX1075921.1"
                     /translation="MMWMIFSGLIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYA
                     LLIAITIQSIGLLILTATDILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWYRA
                     GEGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVIL
                     TIITIFLVVRTLNNKKVRVAVPKLKQRYTGIRYYLFEKRYHPFIAAIAIGLIALLAWP
                     MSASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGIFIGSYIAARGSREFKW
                     RLPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTM
                     SHFIFVRPMKKYNNNLQRSNSKRK"
     gene            complement(25518..26153)
                     /locus_tag="OY092_000960"
     CDS             complement(25518..26153)
                     /locus_tag="OY092_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HCX1075922.1"
                     /translation="MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQI
                     DSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTY
                     NFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ
                     KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE"
BASE COUNT         8657 a         4538 c         3642 g         9456 t
ORIGIN      
        1 ttagtgaaaa agaaaaaatt caattactag cagatattgt tgaactacaa actgaaaata
       61 ataatgaaat agacgtttgt aattatttaa cagatttatt cgacaagtat gatattaaat
      121 ctgaaatttt gaaagttaat gaacaccgcg ccaatatcgt tgcagaaatc ggtaacggct
      181 cacctatact cgcattgagt ggtcatatgg atgttgttga tgcaggaaat caagataatt
      241 ggacttatcc cccttttcaa ctcacagaaa aagctggcaa attatacggt cgaggcacaa
      301 cggatatgaa aggcggtctg atggctttgg tcatcacact cattgaatta aaagaacaaa
      361 atcaattgcc tcaaggaacg ataagattac tagctactgc tggcgaagag aaagaacaag
      421 aaggtgccaa attattggct gataaaggct atttagacga tgtagatggc ttaattattg
      481 ctgaaccaac tggatctgga atttattatg cacataaagg gtctatgtca tgtaaagtaa
      541 ctgcaactgg caaagctgtc catagctcag ttccatttat tggtgacaat gcaattgata
      601 cactgcttga attttataat caatttaaag aaaaatattc agagcttaaa aaacatgata
      661 ctaaacatga attagatgtt gcacccatgt tcaaatcatt gataggaaaa gaaatttctg
      721 aagaggatgc aaattatgca tctggtctta cagctgtatg ttcgattata aatggcggca
      781 aacaatttaa ctctgtacca gatgaagctt cacttgaatt taacgtaaga ccagttcctg
      841 agtatgataa cgactttata gaatcgtttt tccaaaatat cattaatgat gtggatagca
      901 ataagctttc actcgatatt ccaagcaatc accgacctgt aacaagcgat aaaaatagca
      961 aattaattac tacgattaaa gatgtagctt ctagttatgt agaacaagac gatatatttg
     1021 tttcggcgct tgtaggtgca acagatgcct ctagtttctt aggtgataat aaggacaatg
     1081 ttgatttagc catttttgga ccaggtaatc cattaatggc acatcaaatc gatgaatata
     1141 ttgaaaaaga tatgtatctg aaatatattg atatttttaa agaagcttcc attcaatatt
     1201 taaaagagaa ataagaacga tgctgtcagc tgccctattc gcgtgctggc agttttttat
     1261 tgcgaatttt aagttgatag aaataacgat gaatattgtt tgaatgtaaa tattcaaata
     1321 tcaacaagca cattttcatt gattaagtga tgtaaaactg aaattattgt gctgatttgt
     1381 catacatata ttgactaatg gtcatataaa aagatagctt ctaatagtta cataaaactc
     1441 gtaaaaacct tctcgtaaaa ggaatgggac ataaatccct agaaaacagc agctcaacga
     1501 gctgtaaatt atcaaataca tttgaaaaaa gctgatttct atcaaataat ttatagaaat
     1561 cagctttttt acattgtcta agaacttaat gtctctgtct ctttggaact ttatatttca
     1621 taagtactat tttattgttt aacctttttt ttaaataagg tataaatcta caatatccaa
     1681 ataagcccca tcgattctta taatagtcaa aataattata ttcatgtatt actcttattg
     1741 tatttggtaa aatttcattc aattttttta aatcattgta accatattta aaaacaggtt
     1801 gtgaggataa ctttgatacc gattgatgtc tctttgtatt attcgcaatt gtttttgagc
     1861 aaaattcaat cgcaaatgtc aaattatgat ctcccatctt tttgataata gtgtccaata
     1921 attgagtcat tacactctca tcaaaataca tcaatacacc ttcaataata aacaatatat
     1981 ctgacttact attaaaaaat ttataatttt tgacatcatc aatccaactg taatctagca
     2041 tagatttaga tatcatctta taactattac tttctttaaa aaatgttttt cgtatttcta
     2101 ttgattctgg tacatctaaa tctatccatg atattttttc tttattaaat ctttgaaacc
     2161 ttgtatctaa gccacaacct atattgacca cgattaaatc tttattatcc ttgataagcc
     2221 tcttagtaac acaatctatt atcacagtac gtatactaat tccaatttga gacatgtcat
     2281 cacatgtaac atttttgtac atatcatcta aaccatcaaa tattttttta gatagtgcgt
     2341 cttttattat tggtttttcg ttttcgtact cttttgctcg agctatcaaa ggaattaaca
     2401 ttgattcggg aattccaacc agttgcttca tttaatcact ccttaaaaac attagtacca
     2461 atgcataaga aaatttttac aacttatttc tattattttt tatttaaaat ttcttttttt
     2521 aatttacttc tcaaatgttc taatgtaata ggatctgtga accaataatc ttctgcttta
     2581 tatgaaatta catgtccttt ttttacagct tcaatattct gccatgtatg tgttttttca
     2641 aaatcaaatt ttccgtacga aggtttactt aaaaatatat aatcaccagc atatttacta
     2701 atattttctt ttgaaatgga agcatagcct tttttatctt cttgtaattt atctttatat
     2761 tgctttgtca ttggcatacc gaatgcatca tgaacaatat ccaaaccacg accccatgta
     2821 gagttatata tgtatatttg cttttcatct ggttcaaaca cagatgctgt tgcttgacca
     2881 attttacttt gaatttcttt tttatctttt ctagttttat cgtcccactc ttcaatccat
     2941 tttttagctt tatcttcatt attagtcaac ttgcctattt cttttaatat ttctttatga
     3001 ttgtatttat tgtatgtata tgggattgtt ggcgctattt tttggtattt ttttatattt
     3061 ttatccatag catctacaac aattaaatct ggttttgctt tagcaactct ttcaacatca
     3121 ttttctccaa tataatcaac cccttttaaa tagggtttta aaattgaaga atctttagtt
     3181 gtatctgaaa cagcaattgg tttgattcct aactttataa aatcaccaac ataaaatcca
     3241 gttaatacag caactctttt aggtttctct ggtactttca gtgtttcacc attttcaatt
     3301 ttatagtctg tagtctttgt cgagttactt gttttatcga cagatgctga acacgcagtc
     3361 aaaataaata aattacataa taaaattcca attaatcttt tcataatatc atccttttgt
     3421 tttttaattg atattcattt tcaattataa aatattaaaa gaattagtca acgcctgtta
     3481 gtaatacaca tcagtaacat ttctattttc atttatgata ttatctaatt attaatttat
     3541 aatataaagg agtatgaaat taaaatgaac aaagtccaca aacctttata tttttattta
     3601 atgcttttct tctctacaac tatcataggt gcacttttat tgtatttacc tttcactggt
     3661 aaaaagccaa tatctttttt agatgcccta tttatagctt caagtgcatt tacagttact
     3721 ggcctatccc cagttgatat aggatcacag tttaatatac ttggtgaaat agtaatacta
     3781 ttattaattc aaataggtgg tctgggtatc gtgaccgtaa ccctattgac actagtattt
     3841 ttaaatagaa agatatcaat gaaaaataga ttcttgatta tggttacatg gaatattgac
     3901 gaacttggtg gtgttattaa actaattaaa cacttggcta tttatagttt agtcactgaa
     3961 ttaattggta tgatttgttt gtgtttatct tttataccaa aatttggtat aggcaaaggt
     4021 ttatttttaa gcttattcac atcagtatca gcttttaata atgctggatt tgcccttttt
     4081 aagaataact taatagatta ttctagtgat ccaattgtca ttattacaat ctcaatactc
     4141 ataatatttg gaggtattgg acattttgtc gtgatagact ttattaattg taaaaaattg
     4201 agtaaattat ctttacattc taaattagtc ttaactacaa ctagtatcct aataattata
     4261 ggagctatta cattcttttt attagaacag tttaatacta tgcaacatat gggactagtt
     4321 gaaaaaatcg gaaattcttt tttccaatca gtaacaacac gaacagcggg ttttaacagt
     4381 atagatatag caagcattaa caaatctacc gccttaatgt taatgctact tatgtttatt
     4441 ggtggtgccc ctctcagtgc agctggagga attaaaataa ctacttttgc agtagcgttt
     4501 atttttgtac taaattatat acgtaaagaa aataatgttt cagtattcaa taaagaaata
     4561 tctgacaaac atataaaact atctattgtt accattaata tctcatttct atttatcagt
     4621 atcattactt ttatattatc gataattaat ccgaacatat cattaatcaa gttattattc
     4681 gaagtggttt ctgcattcgg aacagtaggg ttaagtatga accttaccac agaatatcat
     4741 ggtattacta aaataattat tatattcgtt atgctttgcg gtaaagtagg actattaact
     4801 ttattaagaa catttatacc accaaaaaat cctaaaaatt accgctacac taaaggacaa
     4861 atttatctat aagataacta tcaatattta acaagaaatg aactagtgtt ttaatctatt
     4921 acatttaaaa aactacctaa acaggtagtt tttctattta ttttaggccc attaaatgtc
     4981 ttatgtcttt aattaagtaa aatgcacaag tacaccttta aaaagattta ctcaaaacta
     5041 aactatacct agttaaccgc ttgtgattaa gaaattttaa atgtggtttc ttttaattat
     5101 gtcaaccacc cataaggatt ttaatcaagc actcattcat tcctgcactc gcaatatgca
     5161 ttacttatag aagtggatgc actctcatat tatggcaata ccataactcc cgcaccataa
     5221 tgatttaaat accattatga atctcaatta caaattagca cataaaaaag acgcctccca
     5281 taagtctagt caccaaatgg aaaacgtctc gtaattaaaa tatatttgcg tgcattctaa
     5341 tttgtactta gaatacatca tactcgttca taatgtaatt ttctaattag tcaaaactat
     5401 atacagtttt acatcattcc cggcattatg cactaataaa aacttacttt aatacacgct
     5461 ttaaagatta ttaaatcagc gttttaattt ttagacaacg ctattatttt tagtttttca
     5521 attctattat gtcactcaaa aactgttttc caacattgat ttattgttgg aaaatctcga
     5581 aaatctagtc catttctcca acaatcgaag aattatgccc ttttttctcc ctttaaataa
     5641 gtcataatac gaggcataca tgcaacattt acaataaaat atgttcctac atcgtattat
     5701 acgaatgctc acacttatag ttgtttagta aacccagatg tattgctaac atacccatta
     5761 tcactatata gtttatgtgc agatagtctt tcatttctat taccactatt tagtgttatt
     5821 gctttacaat tcaaccgttt agaaaattct tcagaatcag ctaataatct ctttccataa
     5881 ccttttttcc taaattcaga atgtataaca aacgcaagga ttctcatata ctctgcattt
     5941 ttttcgtaaa acatcatttt acacatacca cttaaaccaa ttattttatt ttcttttatc
     6001 aaaagcagta ggaagtaatc atcatgattc gttattttct ttagtctctt ttttaaatca
     6061 ttctcatttg ttggataacc tagatcatca tataatttac atagttgatt taatttttca
     6121 aaatcactgt tattaaacaa tcttgtaatt atgctcatat aacccaccct aaaaatatta
     6181 tgtacctatt gttacataca atagatacgc aaaatcattt ctcactgcaa atcaggacgt
     6241 ttctcagcgt aaacaaatca ttgctattct tttgaaaaat atctgcatat catcacagta
     6301 attttataac agattaataa aattaaaaaa aacataacaa caagtattat aataaatatt
     6361 ataatagcta tcgtattaaa tagtttagaa tatgcaaact gaaaaataaa aatcacaatt
     6421 aaaatactaa gtaatgtaga tggtaatagc atcatcagat ctttaacatt atttctttgt
     6481 tcttgctccc aatcgctaat agccctaaaa ctactttttt tatctatagg cgatgtaaaa
     6541 ataccatata ttgaaggtgc tatacctcct aaaatagcag ttcccaaagt tgtcattact
     6601 gaaattactg cgaaagtatc atccgaaagc aataaattca aactaatgca ttgtttatta
     6661 cccatcgaat ttattgacca aatagctaga gaaataaaca acccaaaatt taaaataaat
     6721 gatatagtaa tagcaattgt tgacaaaaca cgaaattttt catttttatt tatattatcc
     6781 attttctccc tttttcttaa atcattttat tatatattac aataattaat ctgaaatgtt
     6841 gatgtaattt gaaaaaaaat atcatacttt tactcctgaa aacctcccta aatcatcaat
     6901 atgaaaatca gtattaggat attgcgttta caactctttt aaatctcact cattcttctc
     6961 atcgtcttaa ccgatactat caataaatac tggcaacacc ataaaatata tacccaattt
     7021 ataaaaacct aattgactca taatcttcta acggtatatc atccacaatc acagtatgat
     7081 taggattatc gttagataca tctttcactg ccttatctaa cccctcatca cctccgtccc
     7141 attcaccaat attaatgaat ataggtacat taccgtttat atcatgctta tctgtaaata
     7201 atttatgata tttacccaac atttcacgag cttttaaacg atcactaggt tttattggta
     7261 cctctatcag ttcaacatgt tcattataga ctaattgtac tttgccactt tgtggatttt
     7321 ctttatattc tccacgcttg actacaactt ctttcgtttc tgtttcatca ccgactgtcg
     7381 cattcgttag cacatgtaat aactcttttg cggttaatac attctcatct ataatcttat
     7441 ctttttgttc ttgtatatat tgcttgatgt gcggcttttt caataaccta cacgctgtca
     7501 catgtgcgct atttgcgtta tatcctgctt ttatggcact ttgtgttaca ttcagtgttc
     7561 taatatactc attcacaaaa cgtgcttgct ttgcagttaa ctcactcatt ttatcacccc
     7621 cacaatttta tctaatatgg tttcatacca taatattaca gattgttctg aacaatctaa
     7681 ggcactacta atatcttgat aactaagtcc ttgtataagg gagtcaaaaa tataaaactc
     7741 tttatcggtc gctaatctgt caacaatcat ttctatgtga ttctttataa tatgatcatt
     7801 gacattatcg tctgtcatca attcgtcaga atcttcatca cctattaaaa agaaatcatc
     7861 agtatttatt tcatcatcgc cccgttaact agctttgaag tctttagcac acttgcatat
     7921 accggctgtc gtgctggcga gatactagca ttgaagtggt ctgatattga ttttgaaaac
     7981 aacacgatta gtattactaa aacatattac aatccaaata ataacaagaa gaaatttcag
     8041 atacttcccc ctaaaactga aagttctatc ggtaagattt ccgttgaccc aaatgtaata
     8101 aaggtgttgc gtgattataa gataaacgtt caaaataatt ggaaaaacga attatataat
     8161 gataaccatt gtaatgaaaa aactatcaat gtggatacaa accattatgt cacgtaccag
     8221 catactcaaa aatatctcta cgcactcatt cagatacaca cattgcgcat tgctcataga
     8281 atcaggtgta cacattaaag aaatacaaga acgattacgg cataaagata tcaataccac
     8341 tatgaatatc tatgctaaaa tcacaaattc atacaaaaaa gacgcctccc ataagtttag
     8401 tcaccaaatg gaagacgtct cgtaattaaa atatatttgc gtgcattcta atttatactt
     8461 agaatgaatc atactcgtgc ataatgtaat tttctagtta gtcaaaacta taaacagttt
     8521 tacatcattc ctggcatgcc acccatgtta ggttggtcat tatttttttc tggaattgat
     8581 gctacaaccg cttcagtcgt taagaacatt gctgcaacac ttgctgcatg ttgtaatgct
     8641 gagcgtgtta ctttagttgg atcaacgata cctgcttcta acatattaac ccactcgttt
     8701 gtagcagcgt taaaaccaac acccggctct gcgtttttca aacgttctac aataacagaa
     8761 ccttctaatc ctgcattttc agcaatttga cgaactggtg cagttagtgc tttaagtaca
     8821 atatttacac ctgtttcaat gtcaccttct gcttcaattt cacttacttt ttggtaaaca
     8881 tttactaatg cagtaccacc acctgcaaca ataccttctt caactgctgc acgtgtagaa
     8941 tttaatgcat cttcaatacg taatttacgt tctttaagct ctgtttcact tgctgcacct
     9001 actttaataa ctgcaacacc acctgctaat ttagctaagc gctcttgtaa tttttcacga
     9061 tcaaagtcag attcagtttc ttcaatttga gatttcaatt ggcttacgcg tgaatcaatg
     9121 ctgttttcgt caccgtcacc atcaacaaca gtggtattat ctttagttac ttctacttta
     9181 cttgcagtac ctaacatatc aattgatgca tcttttaaat ctaagcctaa atcatcagta
     9241 atcacttgcg caccagttaa aatagctaaa tcttctaaca ttgctttacg acgatcaccg
     9301 aaaccaggcg cctttactgc aacagctgta aatgtgccac gcatacggtt tagcacgata
     9361 tttgttaatg catcgccttc aacttcatca gctacaatta agattggacg attagattga
     9421 accacttgtt ctaataaagg taagatatct tggaaagacg agattttctt atctgtcact
     9481 aaaatatatg ggcgttctaa ttcagcgacc attttatctg aatcagtaac catatacggt
     9541 gattgataac cacgatcaaa ttgcatacct tcaaccactt caagttctgt attcaagcca
     9601 tttgactctt caattgtaat gacaccatca ttacctactt tttccatagc ttcagaaata
     9661 taacgtccaa tttcttcatc tgctgcagaa attgcaccta cttgcgcaat ttcattttta
     9721 ttttcaactt tttgagaatt ttcatgtaac gcttcaacag caactttaac tgctttgtcg
     9781 ataccttgtc gtaaaccaac tgggttcgca ccacttgtaa catttttcaa gccttcttga
     9841 atcattgctt gagctaatac tgttgcagtt gtcgtaccgt caccagcaat ttcatttgtc
     9901 ttatttgcga cttcttgaac tagtttagcc cccatatttt catatggatc ttctaattcg
     9961 atttctttag caatcgttac accatcgttc gtaattaaag gtgctgtaaa ctctttatct
    10021 aatacaacat tacgtccttt aggaccaatc gttactttaa ctgcatttgc aagttggtca
    10081 acaccacgta acattgcttg acgtgcatct tcagagaatt tcaattgttt aaccataaat
    10141 gataaacctc catttgttta gttgtgtttc attttcgttc tttttaattt atttatgaat
    10201 taagttctgt attattcaat aactgctaaa atatcttctt catttaatac cagatatgtt
    10261 tcattatctc gtttaacttc tgtaccagca tattgttgga acacgacacg gtccccttct
    10321 ttcacttcag gagtcactct tgtaccatca tttaatagac gtccagttcc tactgcaacg
    10381 ataacgcctt cgtttgattt ttctttagca ctatcagtta aaacaatacc acttttagtt
    10441 gtttgttctt gttctttttt ctcaataatc acacgatttc caattggttt tagcatgatt
    10501 gttcctcctt aaaaaaacct aaagtttagc acttaaaatt aaagagtgct aacatacatt
    10561 tataataatc aaatttggtc aaaatttcaa gtcataacct tttaattaag ttttgtaact
    10621 tcaagttatt taagataaaa taagttataa ataaaatatg tggaggaaaa ttatgacaag
    10681 actatgggca tcattgctaa ctgttattat atatttattg tcgcaatttt taccggcagt
    10741 cattgtaaac acaacacaat ttgcacaata tagtgatttg gaacaactta aagccggcat
    10801 ctatattcaa ctcgttctat ttttaattgc ggctactacg attattttta ttaattttaa
    10861 aatcaaagac cctacaagat tagaatctga agtaaaggaa cctaataaat acattattcc
    10921 atgggcatta cttggatttg cacttgtcat ggtttatcaa tttatagtga gcattgtatt
    10981 aacgcaaatt tatggtggac aacaagtaag tcctaataca gaaaagataa ttattattgc
    11041 tcgaaaaata cctatattta tcttctttgt atctattatt ggtcctttat tagaagaata
    11101 tgtattcaga aaagtaatct ttggagaatt atttaatgcg attaaaggta gtcgtatcgt
    11161 ggcatttatt attgctacaa cagtaagttc attaatattt gcattagcac ataatgattt
    11221 caaatttatt ccagtttatt ttggtatggg tgtcattttt tcattagcat atgtttggac
    11281 aaaacggatt gctgttccaa ttattatcca tatgttacaa aacggatttg tcgttatatt
    11341 ccaattactt aatcctgagg ctttgaaaaa agccacggaa caagcgaatt ttatatatca
    11401 catttttatt ccataataaa aaaacgaatc acacacggat tatcgtcgct gtgattcgtt
    11461 tttatttttc tttttatttc gctttacaaa taagaatagc atgattgaaa ataccaccat
    11521 catagaacat acaattgcta gccaactttt actatatgca gttgacgcac ttttcttatt
    11581 atcttcttgt tttttaacta ctgtaaaatc gtctttttca tgcggttcaa atgaacggtg
    11641 ttttgaatcc ggcttatctt cgggcttttt caaatctggc attgatccaa tttcaccagt
    11701 aattaatgcg agtacctgtt catctaaatt acgataatat cgttctgatt ttaaaggatt
    11761 aaaatattgg aacctaaaat agtttgattg ttgttgtaat ccatttaaat atgcatttcc
    11821 gctgaagttt tgttttcgaa taatattata aatgtcttca tcagtaactt ctccataatc
    11881 tttgcccaac ttattaattt gatttaaaat atacggatta tacttgtaag ccccattcgc
    11941 caaggctaaa aatcgttggg atacaaaatc attaccagta gtattttgtg agtttccttg
    12001 atttccattt ggttgccatt gaccttgatt agatccatct gaagcatttg ggttccatgt
    12061 tcccccattt ttcgagccac cagaatgatt ggaatcccca ggttgatcgg gatctggtga
    12121 cgggttagga tttggcttat tagggtctgg ttttggattc ggatttggct ttggtttatc
    12181 tggatctggt tttggatctg gatttggctt tggtttatct gggtctggtt ttggatctgg
    12241 atttggtttc gggttatctg gatctggttt tggatccgga tttggctttg gtttatctgg
    12301 gtctggtttt ggatccggtt ttggtttcgg gttatctgga tttggttttg gattcggact
    12361 tgggttttgg ttatttgagt ctggttttga atctggactt gggttttggt tgtttgagtc
    12421 tggcttcaca ttattcgaat caggattagc atcacgacta ttcgaacctg tttcttcatt
    12481 acccgtttga tttgatttgt gaggtgtccc agtctcatta ttattcattt cactatttac
    12541 tgatggtgaa gttatattat gattcaaatt agtagttggc ttttctccat ttaagttatc
    12601 ctttgcttca actgtgtgcg ttgcaagccc taaactacta ctacttaaaa ttaaaatact
    12661 tgttgaaagt aacattttct taaaccaatg atatgacatt tcacgagaca cctccctttt
    12721 tcatgtaagt attaatctaa gtataatcaa tatgcgttga aaatgcattt atatttggaa
    12781 tttgaaaatg aatattaata ttcttgaaat tttcgtaaat attactttgc aagttcgagt
    12841 ataaatttta tacttagtct attaagtatt ctttactaaa gaaggagcaa taattatggg
    12901 tttatttaaa aaagataaaa aagcaatgac ttttgacaat gcaatggaag aaagacgttc
    12961 aatatataat ttgaaagatt cgatatcaat tagcgatgac gaattagaat caatgattgc
    13021 acatgcagtt aaacatgttc cttcatcatt taattctcaa tcaactagaa ttgttctctt
    13081 gttaaatgac aacaataata aattttggga taacacaaaa gcaattttaa aagaagtcat
    13141 gggagagaat cgtgatttcg agccaactga acaaaaaatt gataacttca aacattcata
    13201 cggcacaatt ttgttttatg aagatcaaga tgttgtaagt ggtttacaag aacaaatgcc
    13261 aaactactat gataattttg caatatggtc aactcaaaca aatgccatgc atcaatttgc
    13321 aatttggact gcattagcta ctaaaggcat aggtgcttca ttacaacact ataatccact
    13381 tgttgatgag atgacttcaa atgaatttaa tattcctaaa agttggaaac ttattgctca
    13441 aatgccattt ggtgatattc gtgaagctgc tggtgaaaaa acatttaatc cagtggaaga
    13501 tcgtttcgta ataaaaaaat aatcaatatt ttgttaggaa tggtacagaa atgataaaga
    13561 atcattagtt atccattatg tagtagttct tacacattag ccgctgctaa tgtgcactta
    13621 agaataggaa tacatgagta aaactcatgt ataagaaata ctaatttcta aagaaaaagt
    13681 atttctttat gttagagcct aggactttga ttttatgtcc tgggctcgtt ttttgcgttt
    13741 caacataact tttagtaagt tatatataag atctatcaag gatgtgatgt tatgaaagtc
    13801 caaatttatc aattaccgat tatttttgga gatagttcta aaaatgaaat tcaaataacg
    13861 caatggttcg aaaaaaatat gaatgctgaa gtagatgtag tcgttttacc tgaaatgtgg
    13921 aataatggct atgatttaga gcatttaaat gaaaaagcag ataataatct aggacaaagt
    13981 ttttcattta ttaaacattt agctgaaaaa tataaagtcg atatcgtagc tgggtcagtt
    14041 tctaacatta gaaacaatca aatatttaat acagctttta gtgtgaataa aagtggccag
    14101 ctgattaatg aatacgacaa agttcattta gttcctatgt taagagagca tgaattttta
    14161 accgctggcg aaaacgtagc tgaacctttt caattgtcta acggtactta tgtgacccaa
    14221 cttatctgtt atgatttacg ttttccagaa ttattaagat atcctgctcg tagtggtgct
    14281 aaaattgcat tttatgtggc gcaatggcct atgtcacgtc ttcaacattg gcattcatta
    14341 ctaaaggcac gtgcaattga aaataatatg tttgtcattg gaactaatag cactggattc
    14401 gatggtaaca cagaatatgc tggtcattcg atagttataa atccaaacgg agatttagtt
    14461 ggagaattaa atgaatccgc agatattttg actgtagatt taaacttaaa tgaagtagaa
    14521 cagcaacgcg aaaatatacc tgtatttaaa agtattaaat tagatttgta taaataagaa
    14581 gcgcctgaaa taatatttaa cacatgtcat gactaaacat agatttatga gagatttttc
    14641 ataagtctat gtttattttt tataatagat aactcagtaa gaatccattt cgccctttgc
    14701 aaatgaatga ttttcttaat taaattgatt aattttttga ccttttccaa cattagactt
    14761 atttatatat tttaacggtg gctctcataa tgaggattaa ctctcccctt ctttattaca
    14821 ataaaaaagg ccgcgagctt gggaggggct cacgaccata cttattatta agggaatgtt
    14881 ttacagttat tttttcaatc tatttttggg gatgttatta attatgaaaa aaattttatt
    14941 tatcaaataa tgataaatcg atgttgttta cgatagctta catgctagaa ataattatct
    15001 gtaatgataa ttaagaaaaa tacatagcac tgagtccaag gaaactaact ctactagcaa
    15061 atgttactca cttgctaatt ttacatggtt attaagttgg gatggcttaa taactcatac
    15121 ttttagtact atacgaagat aacaaattta caatgaaagt aattaattat tcatcttatt
    15181 ttttagtgaa tttgttcact gtgtcgataa tccattttac taagtcaccg attgttgaaa
    15241 tgatatcttg tgccattgaa atcactcctt ccttaattaa gataaaaatt cttaaaatta
    15301 aacaactcat caactatttt ccatcacatc tctgtgatct agttatatta aaacatgcta
    15361 aaagcattta ttttccaatt tttcttaact agtcgttttt tattcttaac tgtaaatttt
    15421 tttatgttaa aatattaaat acaaattaca tttaacagtt aagtatttat ttactacagt
    15481 taggcaatat aatgataaaa gattgtacta aatcgtataa tgacagtgag gagagtggtg
    15541 taaaattgaa ttattttgat aacaaaattg accagtttgc cacgtatctt caaaagagaa
    15601 ataacttaga tcatattcaa tttttgcaag tacgattagg gatgcaggtc ttagctaaaa
    15661 atataggtaa attaattgtt atgtatactc ttgcctatat tttaaacatt tttctgttta
    15721 cgttaattac gaatttaaca ttttacttaa taagaagaca tgcacatggt gcacatgcac
    15781 cttcttcctt ttggtgttat gtggaaagta ttttattatt tatactctta cctttagtaa
    15841 tagtaaattt tcatattaat ccattaatta tgattatttt aacagttatt tctttaggta
    15901 taatctcagt atatgctcct gcagcaacta aaaagaagcc cattcctgtg cgacttatta
    15961 aacgaaaaaa atattatgcg attattgtta gtttaacctt tttcattatc acacttatca
    16021 tcaaagagcc atttgcccaa ttcattcaat taggcatcat aatagaagct attacattat
    16081 tacctatttt ctttattaag gaggacttaa aatgaataca ttatttaact tattttttga
    16141 tttgattact gggattttaa aaaacattgg taacatcgca gcttatagta cttgtgactt
    16201 cataatggat gaagttgaag tacctaaaga attaactcaa ttacacgaat aataaaaata
    16261 gaaagtgtga tagtaggtgg aattattaaa tagttataat tttgttttat tcgtattaac
    16321 tcaaatgata ttaatgttta caataccagc tataattagt ggtattaagt acagtaaact
    16381 tgattatttt ttcatcatag taatttcgac attatcgtta tttctattta aaatgtttga
    16441 tagcgcgtcc ttaatcatat taacttcatt tattattata atgtattttg tcaaaatcaa
    16501 atggtattct attttgttga ttatgacttc gcagattatt ctgtactgtg ctaactacat
    16561 gtatatagtt atatatgcat atatcaccaa aatttctgat agtatatttg taatattccc
    16621 tagctttttt gtagtttatg tgactattag tatactattc tcatatataa taaatagagt
    16681 tctcaaaaaa attagcacac catatctaat actaaacaaa ggatttttaa tagttatttc
    16741 gactatctta ctgcttactt tttcattatt tttcttttat tcacaaataa actcggatga
    16801 agctaaagta ataaggcagt attcttttat ttttattggt atcactatat ttttaagtat
    16861 attaacattt gttatttctc aatttctcct taaagagatg aaatataaac gtaatcaaga
    16921 agaaattgaa acctattatg aatatacatt gaagattgaa gctatcaaca acgaaatgcg
    16981 caagttccgt cacgattatg tcaatatctt aacaacgctt tcagaattca ttcgagaaga
    17041 tgacatgcct ggcctacgtg attatttcaa taaaaatatt gtacctatga aagacaattt
    17101 acaaatgaat gctataaaat taaatggtat cgagaatctt aaagtacgtg aaattaaagg
    17161 cttaattact gcgaaaattt tacgtgcaca agaaatgaat attccgatta gtatagaaat
    17221 acccgatgaa gtaagtagca ttaacttgaa tatgatcgat ttaagtcgca gtattggtat
    17281 tattcttgat aatgcaattg aggcatcaac tgaaattgat gaccctatca ttcgcgttgc
    17341 atttattgaa agtgaaaatt cagtaacgtt tattgttatg aataaatgcg ctgatgatat
    17401 accacgcatt catgaattgt tccaagaaag tttttctact aaaggtgaag gtcgtggttt
    17461 aggtctatca actttaaaag aaattgctga taatgcagac aatgtcttat tagatacaat
    17521 tatcgaaaat ggtttcttta ttcaaaaagt tgaaattatt aacaactagc cataaggatg
    17581 tgaatgtatg aaaattttca tttgcgaaga cgatccaaaa caaagagaaa acatggttac
    17641 cattattaaa aattatataa tgatagaaga aaagcctatg gaaattgccc tcgcaactga
    17701 taatccttat gaggtgcttg agcaagctaa aaatatgaat gacataggct gttacttttt
    17761 agatattcaa ctttcaactg atattaatgg tatcaaatta ggcagtgaaa tccgtaagca
    17821 tgacccagtt ggtaacatta ttttcgttac gagtcatagt gaacttacgt atttaacatt
    17881 tgtctacaaa gttgcagcga tggattttat ttttaaagat gatccagcag aattaagaac
    17941 acgtattata gattgtttag aaactgcaca tacacgctta caattgttgt ctaaagataa
    18001 tagcgttgaa acgattgaat taaaacgtgg cagtaattca gtgtatgttc aatatgatga
    18061 tattatgttt tttgaatcat caacaaaatc tcacagactc attgcccatt tagataaccg
    18121 tcaaattgaa ttttatggta atttaaaaga actgagtcaa ttagatgatc gtttctttag
    18181 atgtcataat agctttgtcg tcaatcgcca taatatcgaa tctatagatt cgaaagagcg
    18241 cattgtctat tttaaaaata aagaacactg ctatgcatcg gtgagaaacg ttaaaaaaat
    18301 ataataagat aataaagtca gttaacggcg tattcaaatg taaatcttgt tggattttaa
    18361 caagataact agcaaatgca ctgtatagct ggctttttaa ttttaatagc aaaattaaat
    18421 atgacgcgtg aattaaaaaa tgatgtaacg tctctttgta tacctattcc tattactaca
    18481 taatttatca atttctattt cactctacaa tcctatagcg caatttttaa caaaatatac
    18541 taaatttgaa atcgacagtt ttcttaaata aaatactaca atttcctacc ccgtgaatct
    18601 tatttttgtt ttaaaaaaca gtgtagcaca agattcaact tgtttcctac actgttttat
    18661 aaatgaatta tttaaaatgc ttgttcaacc tcttgtaaag ttggcaaact attaatagca
    18721 ccatacttcg ttgtcactat tgcagcaacg cgattgctaa acgctaaaat ttcctcacct
    18781 tcattttcaa ataactgagt taaatttaac acatcggttg ctaaaatcct gctaataact
    18841 gcgccaataa aggcatcccc tgccccagtt gtatcaacag gttttacctt atagccacta
    18901 tgataatgat taataccatt tttcaaatat acggcagcac catctgctcc cttcgtataa
    18961 atgactacag tgacattacc tgtaaataat gattgaatgg ctttattttc atcatgaata
    19021 cctgtaataa attctaattc ttcatctgaa acttttacaa tatgcgccaa tggcaaaaag
    19081 gtatgaatag tttgtcttaa atcttcagcg ttatcccata atggcaatct tacattagga
    19141 tcaaatacga cagtaccatt tgcatttaat gttttggtaa tcaattgata atgtgcttct
    19201 ctcatcggac tatcgatcaa atcaacagaa caaaaatgta ctacatcatt ttcattcaca
    19261 tcaatatcat tcacaaaact tggttcaaat aacatatcag cagagggctt acgataaaaa
    19321 gaaaaatctc gctcgcccgc ttcagtcaaa ctcacaaaag ctaacgcagt gtttgcttca
    19381 ttcgtgcgat acacttttga tacatctaca ccaatacttg atatcgtttc aataatgcta
    19441 tctccaaatg catcattacc taattgtgta atcatatacg cttgttgtcc taacttttga
    19501 actgtacaag ctacattgca tggcgcgcca ccaatttgct tcgtaaatgt ttgaacatct
    19561 tttaaattcg catttgtaat atttggaata aaatcaatta acgcttctcc tattgaaaat
    19621 agacgtctca tttatgttca tcctttaaat catatttagt aaattgtaaa tatacttgcc
    19681 ctgattctgt tgatgtttta atacctagtg cgtcttctgt cgggaaaatt cgagatgtca
    19741 aaacacgttc cccatcatta cagaaaattt ctatactaga tgtatcaaca aaaatttgta
    19801 attgctttaa tggcgtttct aatatcgtac tacgcgtcgt accttcaaca tttgtaggca
    19861 ataaaccact gtcgctgcga tctaatatta ttttattttc acgcttgtta taagcgatta
    19921 atgttgaaga agtcttagac gtacgtaatt caaagtacac ttcggtagca tcattatcca
    19981 aaatatctat gattaattca tactgtttac cttcatacgg atgtaatttt cgagtaaatt
    20041 tatttgcgta gcctaatgct gtctctttat tatgacgtaa tttttccaac gctggatatg
    20101 gacgttgctt aagttgacca ttttctacat ttaatacacg aggaattgtt aagcaatggg
    20161 cccatccttc attatcagta ggatattcga tttccggtaa ccccatccat ccaattagta
    20221 ctcgtcggcc tttttcatct aaaaatgttt gaggtgcata gaaatcaaag ccattatcaa
    20281 gctcgacaaa attttcatgt tcatatgtta atttttcaat atcaaacttt ccaagtatat
    20341 aaccactttg ataaatattt ttgaactgat cgccttttgg ttcaatacct tgtggacaaa
    20401 taagtatgac atcttgatta tctacattaa agtaatctgg gcattcccac atatatccaa
    20461 aatcatctaa ctctgtattt atttcaccta aataatgcca attaattata tcttcagtat
    20521 tataaagtaa taatcgacct tgctgatcat tattttgtgc gccaatgatc gcataatatt
    20581 tctcaccata tttaaaaact ttaggatctc taaaatgact tgtatatcct tctggttgct
    20641 ggctaattac tggctttgga aacttttcta ctgaaccgtc ttctttcaat cgtgcgatca
    20701 tctgactcgc atgtcgttgc caatgattat ctcgatgatt tcctgtgtac atataatata
    20761 aatgcccgtt aaattcaaaa gcgctaccgc tataaacacc atggctgtca tatttagtat
    20821 ctggatttaa aattggccct tcagctttaa agtttattaa gtcatcactc gtgtagttat
    20881 accaatactt taagccatgt actgcgccta aagggaacca ttgatgtgaa acataatact
    20941 tccctttata aaaaataagt ccgttgggat catttaataa gcctgtttct ggttgtatat
    21001 gaaattgttg acgaaatttt gattgatcaa cttgttgttt taatgtttta aaatactcag
    21061 tatcaacgtc ctcgattcgt tgataacgtt cttctctagt ccattcggtc ataatattta
    21121 cccagtcctc cttttataat ttatgctgtt aacaatttat attctattat agcaaatttt
    21181 acctacgttc tttaactttt aacctatcca tttatagtta tatggtatcg gttccacatt
    21241 tattttaaaa aatacagcgt ctaaatatta acatctactg tgacgctata tggcatatct
    21301 tgctttttaa gcatctgttg tatctcttcc atcgcgcatt ggccagcttc aaaataatta
    21361 taatgaattg tttttatcga tggagacact aattgtgtca ttggatcacc accaaaacca
    21421 tatatttgat gtggtttcat aacttctttt ttatcagaat aatatttata ggcagctaat
    21481 gcaatcgtat cagttgctcc aacaaccgca tctacttgct ccacattttc caaaacattt
    21541 gcaacatctt tttgtgcttc cacataagta aaatttgttt catgtatatt aggtttaatt
    21601 tggtatttag ctaactggtc aagtaaacca cgttttctat gtataccaac tgcaatatct
    21661 ttttcactca cactaaacac ttcaatttgt tgatatccct gttgaccaat ccattcacct
    21721 ataatttgac ctgctttata atcatcatgc acaatactat gaagttgttc atgttgttga
    21781 ccaacaataa cgattggtac attcattttg ttaatgactt ctatatgtct ctctgttatg
    21841 tctgtagcca ttaaaacaat accatctact ttactgcgtg ctaatgtttc aagcgcttgt
    21901 atttctgctt cgatatttaa acctgtataa tttaaaatta attgtgattc atatttttgg
    21961 cattgttttg ccaatccttt gattgtttca tctactgcat atgaattcat tctaggtata
    22021 atggcaccaa taaggtgtgt ttgtctcgct cttaaacttt gagcaaattg attcggttga
    22081 tagtcatgtt ctgctataat ttttgttaat ttttcacttg tttttttact gacagatcca
    22141 ttatttaaaa atctagatac tgtacttttt gaaacgcctg ccaatttggc aatatcagat
    22201 atatttttca tacttattca cctatcatta tttgtgacac ttagccttat tttagcatat
    22261 gtgtaaccgc tttaaataat atttctgctt ctttcataaa aagatttcaa aataaaactt
    22321 ttgtataaca aaatgtccca acatcaacct ttagttaaat gtcaggacaa taaatattct
    22381 atgtaaatat attctaatat cgaatatgtt tattgaatct atttagctca ccttcaaagt
    22441 aagcgtgttc accgtgaaca atcttgtcta atcctatatt cgtttcttgt tccgtaacag
    22501 ataatggtgt aattaattta attactttcg caataataaa cgtcatgacg atactaaaaa
    22561 ttacaactgc tgttacacat aatatttgta caagtataat atgtatgtca ccagtataaa
    22621 taaagccatt ctcaatgtca ggatttgcct ttttactttg gaaaactgct gttaaaacag
    22681 caccaataat accgccaaca ccgtggatac caaatgcatc taatgcatca tgatacttta
    22741 attttacctt gatgtaattg atgacaatat aacaacagat acctcctatt aaagccatta
    22801 ttgttgcact aagatatgtc acgtatcctg ctgcaggtgt aatgacaact aaaccagcta
    22861 atgcaccgag taaaagtcca agtaaacttg tcgtcttttt aaaaatatat tctaaaatta
    22921 accaacctat agcacctgca ctggcagaaa taactgtatt cgtaaatgca agcattgcaa
    22981 tttgatcaaa tgtaaaagca ctgccaacat taaatccata ccaaccaatc cacacgaata
    23041 taccgccaat caacgtaatg ataagattat gtggtgttga ttcagaatgt ttgtttcctt
    23101 ttccaatcat tatagctaat actaaaccag aaacacctga tgtaatatga acaactgtac
    23161 ctccagcgaa atctaataca ccgagtttgt taatccaacc gccgccccaa acccaatgtg
    23221 ctactggact gtatacaaga gcagtccata ttactacgaa taataaataa ggaataaact
    23281 tcattttctc agcgattgaa ccagataaaa tagaaattgc aatcgtacaa aacatcattt
    23341 gaaataacat aaacaaagcg aaaggaatat gtgggctaat atcttcttgt gtcgcgaaac
    23401 ctacatgatt aagaaatgta tattcccaat ttccgaacca taaattccct tccccaaaac
    23461 taattgtaaa accaactgtt atccatacaa atgtaacaag cacaattgct gccatacttt
    23521 gcatgacagt atttagcgca tttttagatt gaactaaccc accataaaat aaacttaatc
    23581 ctggtgtcat tagccaaact aataatgtac acaaaaacat aaatatcgta tcgttaagat
    23641 tcatacttac cactcccttg ttttcataat aatctgacaa tttataaaaa gcaaaaatgc
    23701 gttaagtttt attacatctt ttggaataaa atatgccaca ctatataaaa ataatttcat
    23761 gaactaaaac aaaaaagact acttactcgc ttttaaacta gcggaagtag tcctaaactc
    23821 taacatctat tttattgtta aaatgataac gttaaacttt ttgaattgta attgtccatg
    23881 aagcattatc aatttgttca tagtttgtta caggatatcc attttctgct gcccaatttg
    23941 gaatagcttc cgtcgcttgc gtgcaatcaa aatcaatttt taattcatct ccagattgca
    24001 atgttgccat tttcttttgc gcttcaatta acggaaatgg acataccatt cctactgtac
    24061 ctaattcgtg tatcataatt atttctcctt ttccaatcac ttttatttga tcaacatcat
    24121 ttgtataata atcttctata ctatttgcgt ttgctgtttg acctttgcag attgttgttg
    24181 tactttttca ttggacgaac aaagataaaa tgactcattg tccatacacc aactatcatc
    24241 gatgctagcg caatccatcc ttgccaagtc atcgttgccg tttcaaccaa accgttaccg
    24301 atagaacaac caccagcaac tgacgcacca aatcccatac atatgccacc aatagcactg
    24361 tttcgtattg taatcttgtc tggcaatcgc catttaaatt ctcttgatcc tctagctgca
    24421 atatatgaac caatgaaaat ccctagaact aaaaagacac cccaatcaat aaatttagtt
    24481 tcacctgtaa tcaaaaagtg tactaaattt gctgatggcg ttgttatacc taaaccgtca
    24541 tttcttccag ttgatgcact cattggccaa gctaatagtg cgataagtcc aattgcaatt
    24601 gctgcaataa atggatggta tcgtttctcg aaaaggtaat atctaatacc tgtataacgt
    24661 tgctttagtt ttggaacagc tactcgaact ttcttattat tgagtgttct tacaactaga
    24721 aaaatggtga ttatagttaa tataacgact aatccccaaa acggaatgcc agttgtttga
    24781 gacatatcac tatttacatt cgttggttga ttaattttat ccattactgg ttttaaaatc
    24841 cctgttttag tgattgctgc agtaacagca tataatacta atgcaatcca actaccaatt
    24901 aacccttcac cagcgcgata ccaagtacct gttgcacacc ctccagccaa tactattcca
    24961 attccaaaaa taaaagaacc tataattgtt cccaatattg gaaaactatg tgcaggaatt
    25021 tgtaaaatat ctgttgccgt caaaatcaat aatcctatac tttgaatagt aatagcgatt
    25081 aataatgcat agaacatctt attattcttt tgcacataca tatctcgaaa gccacctgtt
    25141 aaacaaaatc ttgttctttg catgacaaaa cctaagagtc ccccgacaat taagccacta
    25201 aaaatcatcc acataatcct aacctctcat ttccgataag tttagtatgt attataggtg
    25261 atgattttct tgttttcaac cttatacaca atatttttga tatttatatt atattcatat
    25321 aaggaaggcg attaattacg attcatcatt atatctctac gtgttaattt attaacctat
    25381 actatattta tcaacacaac agtttttcct ttcattttca aacataacag aaaaagcctg
    25441 agacatattt agtcccagac tgctctataa ttaattaaag atataacaag gttaatcatt
    25501 caaagctaac atcacattta ttcactataa tttttcataa agaataataa tgactgtaat
    25561 tctataccta agtcaatttg atgtacttgc acatctgaag gcgtattaat tctaccagga
    25621 gtgaagttta aaataccttt cacaccagct tggacgagtt catctgcaac tttctgtgca
    25681 actctttctg gtgtagttag aatcacaaca tctatttctt ccttcttcaa tgttgttatt
    25741 aattcatcgt tatcttttac aataacgttc cctattttct ggccaataac atcttctttt
    25801 acgtcaaacg cttctgtaat cgtcatatcg tcatgtattg aaaagttata tgtgagcaaa
    25861 gctttcccta ggttcccaac tccgacaatt gcgattttga tcatgtcact ctcgcttagt
    25921 tcagatttaa agaaatccaa taaactatct atattatatc cgtacccttt tttacctaat
    25981 tcgccaaaat atgaaaagtc acgacgaatt gttgccgagt caatttgtaa cgcatcgcta
    26041 atcgcttttg aatttacacg atctatacct ttagatttta atgaactgac aaatctataa
    26101 tataacggca aacgttttaa agttgctcga ggaattttaa cttggtcact cattcgctat
    26161 ttcctccttc gtgtttgaat gaattatatc tatgtattca aacgagttag agcgtaattg
    26221 ttagattatt aaaaaacaaa taattgatta caatgaatac ctaaatatta tacattattg
    26281 aattttaaaa ata
//
LOCUS       DAKPJH010000027        25790 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.027, whole genome shotgun sequence.
ACCESSION   DAKPJH010000027 DAKPJH010000000
VERSION     DAKPJH010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 25790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25790
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.027"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            122..1213
                     /locus_tag="OY092_000961"
     CDS             122..1213
                     /locus_tag="OY092_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1075923.1"
                     /translation="MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKY
                     VQTIAIYSQFGQKPPVDAYLKVIAILLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVK
                     FTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYAD
                     STHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFK
                     AMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTI
                     ILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKDKKVVTEPKNTKVENDKVATSVE
                     TKTEKAQDSLNDNTTKTMTSDKPEDNQPK"
     gene            complement(1728..1832)
                     /locus_tag="OY092_000962"
     CDS             complement(1728..1832)
                     /locus_tag="OY092_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075924.1"
                     /translation="MLLLERTSMSDFEMLMVVLTIIGLVLISNQGHKK"
     gene            complement(1930..2091)
                     /locus_tag="OY092_000963"
                     /pseudo
     CDS             complement(1930..2091)
                     /locus_tag="OY092_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002504693.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            2509..2667
                     /locus_tag="OY092_000964"
     CDS             2509..2667
                     /locus_tag="OY092_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001792784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCX1075925.1"
                     /translation="MRKSSDALFNLLTQSFELIEGVHNELVTDNLKTVMYKPRKERTN
                     GRINRRFK"
     gene            complement(3327..4184)
                     /locus_tag="OY092_000965"
     CDS             complement(3327..4184)
                     /locus_tag="OY092_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCX1075926.1"
                     /translation="MDNVKAIFLDMDGTILHENNQASTYTKDVINRLREKGYKVFLAT
                     GRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQIINLAKRQQIY
                     YEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEG
                     EYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMI
                     AHFGIHQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAK
                     YLAKHFLAD"
     gene            complement(4252..5034)
                     /locus_tag="OY092_000966"
     CDS             complement(4252..5034)
                     /locus_tag="OY092_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1075927.1"
                     /translation="MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTL
                     LNILNAYEPATTGGVNLFGEMPGKVGYSAETVRQHIGFVSHSLLEKFQDGERVIDVVI
                     SGAFKSIGVYQDIDDEVRNEAHQLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQ
                     PQVLILDEPAAGLDFIARESLLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLK
                     DGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE"
     gene            complement(5266..7071)
                     /gene="glmS"
                     /locus_tag="OY092_000967"
     CDS             complement(5266..7071)
                     /gene="glmS"
                     /locus_tag="OY092_000967"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HCX1075928.1"
                     /translation="MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTV
                     FKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGV
                     IENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALG
                     LLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKD
                     EVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEG
                     NLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMP
                     LLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAG
                     PEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIM
                     EQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIE
                     DGTPVVALATQENVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTP
                     LVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE"
     gene            7752..9290
                     /locus_tag="OY092_000968"
     CDS             7752..9290
                     /locus_tag="OY092_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HCX1075929.1"
                     /translation="MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFID
                     NGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPM
                     LLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPIM
                     KFIMHILSVAVESLVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQS
                     ILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLF
                     IAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFV
                     VATLIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETS
                     SSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGIND
                     ITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKK
                     DDQA"
     gene            9325..11457
                     /locus_tag="OY092_000969"
     CDS             9325..11457
                     /locus_tag="OY092_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HCX1075930.1"
                     /translation="MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKG
                     VESYLTSFSLTLERANKKGLRIAGADSDLNDLKQSIAQLQTIDLSVEEQKVIIIYALI
                     QAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKR
                     EFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPY
                     QLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLDQIYD
                     VTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTL
                     VDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEI
                     AFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLK
                     SLDLSQYDGIISTVNLDIDTPYLMVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMN
                     DKDDVHVETKDIDGNTSFENEQTSNLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKI
                     VSTEVKQWQTYIADYLYQCDAIKDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNM
                     IKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLES
                     IDTFMENPQELETLLRSKFLERIKKQFI"
     gene            11469..11903
                     /locus_tag="OY092_000970"
     CDS             11469..11903
                     /locus_tag="OY092_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCX1075931.1"
                     /translation="MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAM
                     KDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGK
                     DGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA"
     gene            11903..13009
                     /locus_tag="OY092_000971"
     CDS             11903..13009
                     /locus_tag="OY092_000971"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCX1075932.1"
                     /translation="MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDH
                     QYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFA
                     SFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNEN
                     ILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFA
                     GKATVLDAVKDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSD
                     EVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTGDQETVEKN
                     NYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS"
     gene            complement(13328..20644)
                     /locus_tag="OY092_000972"
     CDS             complement(13328..20644)
                     /locus_tag="OY092_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HCX1075933.1"
                     /translation="MNLFRQQKFSIRKFNVGIFSALIATVTFISINPTTASAAEQNQP
                     AQNQPAQPADPNAQPNANAGAQANPTAQPAAPANQGGQADPAANQGGQANPAGGAVQP
                     AAGTTQPAGQGNQADPNNAAQAQPGNQAAPANQAGQGNNQATPNNNATPANQTQPANA
                     PAGAQPAAAVAANGQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVN
                     GYSLINNGKIGFVNSELRRSDMFDKNNPQNYQARGNVAALGRVNANDSTDHGNFNGIS
                     KTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPT
                     DADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKAT
                     NNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLK
                     NMTVNYDQTANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNIANIDTPKNIDFN
                     EKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAE
                     YNKLKQQADTILNEDANHVETANRASQADIDGLVTKLQAALIDNQAAIAELDAKAQEK
                     ITAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTAQGVTTEKDNGIAVLEQDVI
                     TPTVKPQAKQDIIQAVTTRKQQIKKSTASLQDEKDVANDKIGKIETKAIKDIDAATTN
                     AQVEAIKTKAINDINQTAPATTAKAEALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIE
                     RINAAKVSGVKAIEATTTAQDLERVKNEEIFKIENITDSTQTKMDAYKEVKQAATARK
                     AQNATVSNATDEEVAEANAAVDAAQTEGLHDIQVVKSQQEVADTKAKVLDKINAIQTQ
                     SRVKPAADTEVDNAYNTRKQEIQNSNASTTEEKEAAYTELDAKKQEARTNLDAANTNS
                     AVTTAKDNGIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTSEEQQAAKDK
                     VDQAVVTANADIDNAAANSDVDNAKTTNEATIAAITPDANVKPQAKQAIADKVQAQET
                     AIDANNGAITEEKAAAKQQVQTEKTTADTAIDGAHSNAEVEAAKNAEIAKIEAIQPAT
                     TTKDNAKQAIATKANERKTAIAQTQDITAEEIAAANADVDNAVIQANSNIEAANSQND
                     VDQAKTTGETSIDQVTPTVNKKATARNEITTTLNNKLQEIQATPDATDEEKQDAETEA
                     NTENAKANQAITAATTNAEVDEAKTNAEAAINAVTPKVMKKQAAKDEIDQLQAAQTAV
                     INNDQNATNEEKEAAIQQLATAVTDAKNNITAATDNNGVDTAKDAGKNSIQSTQPATA
                     VKSNAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVSKAKEKAYQDILNAQTTNDV
                     TQLKDQAVADIQGITADTTIKDVAKGELTAKANEQKALIAQTADATTEEKEQANQQVD
                     AQLTQGNQNIENAQSIDDVNTAKDNAVQAIDPIQASTDVKTNARAELLNEMQNKITEI
                     LNDNTTTNEEKGKDIGPVRAAYEEGLNNINVANSTGDVTTAKDAAVQKVQQLHANPVK
                     KPAGKTELDQAAADKKTQIEQTPNASQQEINDAKQEVDTELNQAKTNIDQSSTDDYVD
                     AAVRDGKAKINAVKTFSEYKKDALAKIADAYNAKVNEADNSNASTSSEIAEAKQKLAE
                     LKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKESATTDLYAYADQKKNNIS
                     ADTNATQDEKQQAIKQVDQNVQTALESINNGVDNSDVDDALTQGKATIDAVQVDATVK
                     AKANQAIDAKAQETKESIDQSDQLTAEEKTEALATIKQITDQAKQGITDATTTAEVEK
                     AKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDSDATTEEKEVFTNALEEI
                     LSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKN
                     ADADASAKEIARTDLGRYFDRFADDLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDAN
                     HSSSDNNDATANTNVNAEPDNAGQPNVTESTDNANADTSSTTTNNHNDAATGETTATS
                     TNNSSTDDANDKPTANNNSSVDASIDNSATGNGTTDKPATTESTEKTSSADSKDNASV
                     NDSNQNAEVNNSAESQPTNGKVAQPKSENKAKVEKDGRDSTNQSMVESTTETLPSADI
                     TEPNVPSNTSKDKEESTSNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASS
                     EAKDKMTSTEDSQKADMATADTKDNQASIGSSADANNKATQNDGANASPATVSNGSNS
                     ANQDMLNVTKPEENKANAKSDQQGKVNKPKQQAKTLPDTGMSHNDDLPYAELALGAGM
                     AFLIRRFTKKDQQTEE"
     gene            complement(20921..22276)
                     /locus_tag="OY092_000973"
     CDS             complement(20921..22276)
                     /locus_tag="OY092_000973"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HCX1075934.1"
                     /translation="MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPR
                     VLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISAS
                     HNPVADNGIKFFESDGFKLSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQK
                     YLSYLKSTVDVNFEGLKIVLDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKC
                     GSTHPEKLAEKVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQE
                     LNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVM
                     MDYNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSLINVRVTDKYRVEENVDV
                     KEVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLD
                     K"
     gene            complement(22303..23235)
                     /locus_tag="OY092_000974"
     CDS             complement(22303..23235)
                     /locus_tag="OY092_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HCX1075935.1"
                     /translation="MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTI
                     QDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQ
                     EKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQ
                     TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNL
                     QVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDL
                     DGISESTEKTVKINLPEHVTKAQPSETKAYINVK"
     gene            complement(23237..24046)
                     /locus_tag="OY092_000975"
     CDS             complement(23237..24046)
                     /locus_tag="OY092_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HCX1075936.1"
                     /translation="MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQL
                     LKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFL
                     KRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNIS
                     QELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEV
                     SDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK"
     gene            complement(24235..25145)
                     /gene="rocF"
                     /locus_tag="OY092_000976"
                     /pseudo
     CDS             complement(24235..25145)
                     /gene="rocF"
                     /locus_tag="OY092_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
     gene            complement(25289..25361)
                     /locus_tag="OY092_000977"
     tRNA            complement(25289..25361)
                     /locus_tag="OY092_000977"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25326..25328),aa:Lys,seq:ttt)
     gene            complement(25365..25439)
                     /locus_tag="OY092_000978"
     tRNA            complement(25365..25439)
                     /locus_tag="OY092_000978"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25405..25407),aa:Gln,seq:ttg)
     gene            complement(25449..25532)
                     /locus_tag="OY092_000979"
     tRNA            complement(25449..25532)
                     /locus_tag="OY092_000979"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25496..25498),aa:Tyr,seq:gta)
     gene            complement(25561..25636)
                     /locus_tag="OY092_000980"
     tRNA            complement(25561..25636)
                     /locus_tag="OY092_000980"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25601..25603),aa:Val,seq:tac)
     gene            complement(25644..25715)
                     /locus_tag="OY092_000981"
     tRNA            complement(25644..25715)
                     /locus_tag="OY092_000981"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25680..25682),aa:Glu,seq:ttc)
BASE COUNT         7636 a         4633 c         4114 g         9407 t
ORIGIN      
        1 ttgacaattt actattataa ttctctaact ttagtcactt taattaattt ttattagata
       61 ttaatatgaa aataacgtgt tttttgttat tgtatttata tgaagaaaag gaggcaccac
      121 tttgtttact tactttaaat cagcatttaa aaatgctaaa ccacaattat taataacatt
      181 gatatatgca cttatagcat ttgctgtaat tgcagttgta tatttacttg ctaatttcca
      241 gcttgctaag tatgtacaaa ctattgcaat ttattcacaa tttgggcaaa aaccaccagt
      301 agatgcatat ttaaaagtta tcgctatatt acttatagca gctgtagttt cactgtttgt
      361 tttagttcaa atttttatcg gaattacaaa tgttatgaaa cgagcaatga gtcatgaaaa
      421 agtaaaattt accgatttat ttattgcatt taaaaaaggt aattatttaa agagcgttct
      481 gatcggtctt gtatctatag caatgattat cgttctttca cttctgacat cattactata
      541 caaattattt tctccagtat cagaaatgat tatgaattca gtacaatcat catatgcaga
      601 tagtacacac ctgattggta ttgctattac aactcaaagc atcataatca ttgttgtttt
      661 attgattaaa gcaattatta cttggttatt gttaatacct attttcaact ttatgactag
      721 tttcgttgaa tcaactaacg ataaagtaaa aacacactta gctaatggat ttaaagcaat
      781 gaaaaatggt caaaaaacat ttttcaaatt tttcattgga atactattat taaacttaat
      841 tattatttta tttaaaacac ctgttggtta cttgatttca tttaatacgc aatcactctc
      901 tcaaagtgtt gcagaaaata tcataagagt ttatacagta atgacaatta ttttattcgt
      961 tgttattcat gcaatcattt taatgggtat cgttcaatat tacttaaaac gtggtcaaaa
     1021 aattactaaa gataaagtaa aaacagctga caaggataaa aaagttgtca ctgaaccaaa
     1081 aaatacaaaa gtagaaaatg ataaagtggc aacatctgtt gaaacaaaaa cagaaaaagc
     1141 acaagattca ttaaatgata atacaacaaa aacgatgact tcagataaac cagaagacaa
     1201 tcaaccaaaa taaattttag agccccttac aactttagtt gttaggggct cttatgcagt
     1261 tgatgcgtag catccaactg tattcctcta tttttcaact ttagttgtta ggggctctta
     1321 tgcagttgat gcgcagcatc caactgtgtt cctctatttt tcaactttag tagctgatac
     1381 cgaaataaca tgatgctaat ttcatggcat gccgaaaaaa tatatgaaga ggtctgcagt
     1441 actttttata tagtccgtga ttacattcta tactttttat tgttttttgt tgtattgata
     1501 gttggcttta ttatttctga ttatgttcag aactacaatt cataagaaaa atgtgttaaa
     1561 atatatttgt agtaagtaga agtaaaagat gaaaatcttt aactcttgaa acacaaaaag
     1621 ggcaacactc agaaacatgt taccctaatg agcccgttaa aaagacggtg accttatatt
     1681 ttatttaaaa atagccttca aaaatgccgg tcaaagcgaa tagaaggtta ttttttatgg
     1741 ccttgattac taatcaatac taaaccaatg attgttaata caaccatcag catttcaaaa
     1801 tcagacatgc tagtcctttc taggagtaac aactataacc ataggcatca cccctttatt
     1861 aagagattag ccaccatcta tccaacttgc tcaataaata ttataacatg cacgctttta
     1921 aacagtaatt catagtataa gttttttcat ttcgttaaca actcgataaa cagttgagcg
     1981 acatacccct gtctgactag ctatttcttc ccctgctatc ttttgttcat catataaaaa
     2041 tttaatttct cactttttat gctctggtaa agaggggcgc ccgctttttc ggctgataag
     2101 ctcccttcaa agtagacatt gaaaaataaa aatttcgaaa gagaaatcgt cagtctatta
     2161 ttgacaatta ttatccgatc atccaaaaga tactttcaga cactagtaaa caatagttct
     2221 actataagca tatattttgg caatatttga aggttaaaca tggattaacc tgtgcctatt
     2281 ctacatttag agctatcctt aagcatgatg aatttaatcg ttattttatg aaaagttatc
     2341 aacagatgtc gcctaaagtt tcaacgagat tcgagacaaa acccagtcat caagtacagt
     2401 ttgactggaa agaaaccatt aattttaaaa agaaagataa tcaaatgatt tcactaaata
     2461 taggagtgct actactttct tattctcgtt ttataatcat gcatgacaat gcgtaaatca
     2521 agtgatgcct tatttaattt attaacacaa tcgtttgagc taatagaagg tgtacataat
     2581 gaacttgtaa cggataactt gaaaacagtc atgtataagc caagaaaaga acgtacaaat
     2641 ggtcgaataa atcgtagatt taaataattc gctgatggtt ttaattttaa agtaaaacct
     2701 tgtatttccg gccgccctag aaaaaaggta aagttgaatc aataacgaaa tcattagatg
     2761 aaattcatgc ttatcaagac gaattgtatt tggaaaaagt tcctaagttt ttttatctta
     2821 atgaacgatt taactactaa gttcatacta gtacaggtaa attgcctatt actgcctaag
     2881 agaaagaaaa aattttctta caaccactac agaatgtgaa tgtaaaaaac tcatataaag
     2941 tgaaacatat cttacttatg gaatgaaatg tttgatgatc tcaaaattgc aaatgcgagt
     3001 ttggagttgt tagggtccct tatgcatgcc cttagcgcaa acactctact taaagaaacg
     3061 gtagttgtta tagtatactt aaatgcataa accatataaa agcggatata actatgacat
     3121 tcggttcaat tgtagctata ctctgtgccc tatttgtgat tttcttcatt ccatatatgg
     3181 agaagaaaga caaaaagaag aaataacact agtacctgga ttactagcat acaaaagagc
     3241 agtaaggcat tttctaacag aaaataactt tactgctctt tgtatattgc tcatcaacta
     3301 ttttggattt attattaaaa caccaattaa tcagctaaaa aatgttttgc taaatatttt
     3361 gctgcgccat cctcttcatt cgtgtatgcc gttacatctg aagttaatgc ttggatttca
     3421 gggcgtgcat ttttcatagc aactgtataa tgaccaaatt caaacattgc tctgtcgtta
     3481 tcactatctc caataactaa agtttcatct tgatgaatgc caaagtgtgc aatcatttct
     3541 ttaataccag tgcctttatc agtttgataa gccattgttt ccgcattaaa tcttgatgaa
     3601 tttgaaacac taatctgtag ttgcacatga ttttgcttta attcatctct aaatgctgtt
     3661 attttttcta aattagaact gaatagataa atttttgaat attcaccttc aggaaactta
     3721 gttacccaat ctatcttacc agcaagcgca tcttgtcttg aagaccattc actatgactt
     3781 acgccattaa taggatcttg actacgaatc atatctcgca tccatgtttc atcttctttt
     3841 aaagaaactc tattaccttc aaaaggaaat acctcataat aaatttgttg gcgcttagct
     3901 aaattaataa tttgttgcac ttgagccaat gataaaccat gtttgaagat aatttctcca
     3961 tctacttctc caattgttcc atttgaacta atgatgccat taaccgcaaa atcttgaggt
     4021 acaagttgat gtatttcaga atgcgaacgt cctgttgcca aaaatacttt atatcctttc
     4081 tctctcaatc gattaatgac atctttcgta tacgttgatg cttgattatt ttcatgtaaa
     4141 attgttccat ccatgtccaa aaatattgct tttacgttat ccatattgcc ctccactgtc
     4201 cattttatct taattaaatt ttgtcattat tacttattat ttgcaaaata tttactctaa
     4261 cattgccata gaaaatcgat tattccatct ttgaactgct acatttttct ggaaaaatcg
     4321 tgacatgttt tcagatgtca aaatatcatc tattaatcct tgttgtacac tttccccatc
     4381 ttttaatagc aaaattttag taaagttacc agtaatttct tcaataaagt gcgtcacata
     4441 aatcatcgca agcgttggat atgaatctga caatgagtca agtatattca atagtgactc
     4501 acgagcaata aagtctaaac cagctgctgg ctcatctaaa attaaaacct gaggttgccc
     4561 cattaaagct cgtgcaatca tcactcgttg tttttcacct gtagataaat aaccaatata
     4621 ttgttgcgct ttagcagata ttccaactaa tttaagtaat tgatgtgctt cattacgtac
     4681 ctcatcatca atatcttgat aaacaccaat tgatttaaaa gcaccgctta tcaccacatc
     4741 gattactctt tcaccatctt gaaacttttc cagtaaacta tgagatacaa aacctatatg
     4801 ttgtcgtaca gtctctgcag aataccctac cttgcctggc atttcaccaa atagattaac
     4861 accgccagtt gtcgcaggct catatgcatt taatatattt aatagcgttg tcttaccagc
     4921 accatttaaa ccatatagaa tccatttgtc acctttagca atttgccacg aaatattttt
     4981 taaaattgtt tttccttgct tcattcgccc aatttgatct aattgaatta acatgcgagg
     5041 tcaccccttt attgctactc catacttctc ataaaatcat attaacataa cacccttaat
     5101 tgtcagacta tttaaataaa taaaacactt catttttacg catttctgcc aaattaagat
     5161 gaagtaaaag ctaagtcgac ctaaaaaagc acccttctag tcgattaatc taaaagggtg
     5221 ccatatactt taattttaat acatgattga ttctaaaaaa gtgaattatt ccacagtaac
     5281 agatttagca aggttacgtg gtttatccac atctaaatct ctgtgtaatg ctgcataata
     5341 tgaaatcaat tgtaatgcaa ctactgaaac taatggtgtc aataattcat gtacatgtgg
     5401 aatgacataa gtgtcgcctt ctttttcaag accttccata gaaatgatac atggatgtgc
     5461 accacgtgct actacttctt taacgttacc acgaattgat aaattaacgt tttcttgagt
     5521 tgctaaagca acaactggtg tgccatcttc gattaaggca attgtaccat gtttaagttc
     5581 tccaccagca aaaccttctg cttgaatgta agaaatttct ttaagtttta acgcaccttc
     5641 taaacttacg ttatagtcaa tagtacgtcc gataaagaat gcattgcgtg ttgtttctaa
     5701 gaaatctgta gcaatttgtt ccataattgg tgcatcgtca acaattgctt ctattgctgt
     5761 tgttactttt gctaattctc tcaataaatc aatatctgct tcacgaccgt gctcttttgc
     5821 aacgatttga gacaagattg ataatactgc aatttgtgca gtatatgctt ttgtagatgc
     5881 aactgcgatt tcaggacccg cgtgtaataa caatgtgtgg tctgcttcac gtgataaagt
     5941 tgaacctgca acattagtga ttgttaatga tttatgacct aatttattag tttcaactaa
     6001 tacggcgcgg ctatctgcag tttcacctga ttgagaaata taaacgaaca atggtttttc
     6061 agataataat ggcatgttgt agacaaactc tgatgcaacg tgtacttcag ttggtacgcc
     6121 agcccatttt tctaaaaatt ctttacctac taaacctgca tggtagcttg tacctgctgc
     6181 aataacgtaa atgcggtctg cttctttaac atcattgatg atgtcttgat caattttcaa
     6241 gttaccttct gcatcttgat attcttgaat aatacgacgc attactgctg gttgttcatg
     6301 aatttctttt aacatgtagt gtgcataaac acctttttca gcatctgatg catcaatttc
     6361 agcaatatat gaatcacgtt ctacaacgtt tccatctgca tctttaataa taacttcatc
     6421 ttttttaaca ataacgattt catggtcatg gatttcttta tattcgcttg tcacttgtaa
     6481 cattgcaagt gcgtctgatg cgataacatt gaaaccttca ccaacaccta ataataatgg
     6541 tgatttattt ttagcaacat agattgtgtc tttgtcttca gcatctaata aacctaatgc
     6601 atatgaacca tgtaataatg acacaacttt tgtaaatgct tcttcagttg aaagtccttg
     6661 atttgaaaag tattcaacta attgaacgat aacttctgta tctgtttctg aaatgaatga
     6721 tacaccttgt aagtattcac cttttaactc ttcatagttt tcaataacac cgttatgaac
     6781 tagagtaaaa cggccatttg atgattgatg tggatgagag ttttcatgat tcggtacacc
     6841 gtgtgttgcc caacgtgtgt gaccgattcc aacaggtcca tcaaaatcgc tactatcagc
     6901 aactttacgt aattctgcaa tacgaccttt ttctttaaat acagttgtat tatcatcatt
     6961 tactactgcg atacctgcag agtcataacc tctgtattct aatttttcta aaccttttaa
     7021 taataattct ttggcattat catagccaat gtaaccaaca attccacaca taacgacatt
     7081 ttcctccata ttggaatagt acgcgtaaat tatgatttat tgccgataat ttagattgac
     7141 aatctgcttt cataatataa ataggaacat gctatcatcg cattcatcca taacaaatta
     7201 agcatagtta tttttacaac tatacaaatt gctcacactg tactttccat attaatattt
     7261 tttatattca atttctggcg atcttattaa ctttgtccat taagtcaccc taatgtttta
     7321 cttaataagc taacgaatga gccacatccg ggatagcatc cgccgatcta ttcgatcact
     7381 atcctcctcg tctacaaata catatattgc actctataaa ggccactcat atattaacct
     7441 ttaatcttca aatacaaata tttatttgca caggcgcttt aactgtactg ccgaactttc
     7501 cccctttcca ttaatcatta ttgtacaacg gtgttgtttt gttttgcaaa tattttcaca
     7561 ataaaatttt aaaaatccta aaacaatttt tttgttttac tttttcaaaa tatctatact
     7621 gtcacattga tgacacttta tttaattttg tcacatttat tttgacaaag ttgatttttg
     7681 tttatattga gtaacaagta acgtctctat acactatata tagtcacata tattaaaaaa
     7741 gaggtgtaaa tatgtcacaa actgaagaga aaaaaggaat tggtcgtcgt gttcaagcat
     7801 ttggatcatt cttaagtagt atgatcatgc caaacattgg cgctttcatc gcttggggtt
     7861 ttatcgcggc catttttata gataatggat ggttacctaa caaagattta gctactttag
     7921 caggaccaat gattacttat ttaatcccat tattgatcgc atttagtggt ggtcgtttaa
     7981 tttatgattt acgtggtggt atcatcgcag caacagcaac tatgggggtc atcgttgcat
     8041 tacctgatac accaatgtta cttggtgcaa tgattatggg tccacttgtt ggttggttaa
     8101 tgaaaaagac agaccaatta atccaaccta gaacaccaca aggttttgaa atgctattta
     8161 ataatttttc agctggtatt ttaggattta tcatgacaat tgcaggattt aaaattttag
     8221 caccaattat gaagtttatc atgcatattt tatcagtagc agtagaatca ttagtgcatg
     8281 cacatctact tccacttgta agtattttag tagaacctgc aaaaatcgta tttttaaaca
     8341 atgcgattaa ccatggtgta ttcacaccgc ttggtgcaga tcaagctgca aaagctggtc
     8401 aatcaatttt atacacaatt gaatctaacc ctggaccagg tttaggtatc ttacttgctt
     8461 atatgatttt tggaaaaggc actgcaaaag caacgtcata tggtgctgga attatccact
     8521 tcttaggtgg tattcatgaa atttatttcc catatgtatt aatgcgtcct ttattattta
     8581 tcgctgttat tttaggtgga atgactggtg ttgcaactta tcaagcaaca ggatttggat
     8641 ttaaaagtcc cgcgtcacca ggttcattta tagtttactg tttaaatgca cctagaggtg
     8701 aattcttgca catgttactc ggtgtgttcc ttgctgcact tgtatcattc gttgtagcta
     8761 ctttaattat gaagttcact agagaaccaa agcaggattt agaagctgcg acagctcaaa
     8821 tggaaaatac taaagggaaa aaatcaagcg ttgcttctaa gttagtatct tctgataaaa
     8881 atgttaatac agaagaaaat gctagtggta atgttagtga aacatcttca tcagatgatg
     8941 atcctgaagc gctattggat aattacaaca ctgaagatgt tgatgcacac aattacaata
     9001 atataaatca tgttattttt gcctgcgatg cgggtatggg ttctagtgca atgggtgcaa
     9061 gcatgttacg taataaattt aaaaaagcgg gcattaatga tattacagtt acaaatactg
     9121 cgattaatca attgccaaaa gatgctcaat tagttatcac tcagaaaaaa ctaactgatc
     9181 gtgctattaa acaaacacca aatgccatcc atatttcagt ggataatttc cttaattcac
     9241 caagatatga agaactttta aataatctaa aaaaagatga tcaagcataa taattaaata
     9301 aattaaaaaa tggaggatac cgccatgtta ttgagtacac gtgaaaaaga aatgatagcc
     9361 ctattgatta agtaccacgg tcaatatatc actatacacg acattgctca gcaacttgcg
     9421 gtgtcctctc gtactattca ccgtgaatta aaaggtgttg aatcatattt aacttcattt
     9481 tcattaactt tagaacgtgc aaacaaaaaa gggctacgca ttgctggcgc agattctgat
     9541 ttaaatgatt tgaagcaatc gatcgcacaa cttcaaacca ttgacttatc tgttgaagag
     9601 cagaaagtaa ttattatata cgctttgata caagccaagg agccagttaa acaatatagt
     9661 ttagcgcaag aaattggcgt ttctgtccag actttagcaa agatgttaga tgatttagag
     9721 ctcgatttaa ataagtacca actatcttta tctcgaaagc gtggcgaagg tatttacttg
     9781 gtaggtactg aatcaaagaa acgtgaattt ttaagtcaat taatggtgaa taacttaaat
     9841 agtactagcg tttattcagt aattgaaaat cattttgtct ttcattcatt aaatcaaatc
     9901 cacaaagact ttgttgactt agagcgtatt tttaatgttg aaagactatt aatggactac
     9961 ctaagtgcct taccctacca acttaccgaa tcaagttatt taactttaac tgtccatatc
    10021 gtgctctcca tttcacgtat aaaaaatgga gagtatgtcg cattaaacga tgatatttat
    10081 gattctgtac aaaacacatt tgaacacaaa gtagcaagcg aacttgctga taaacttgat
    10141 caaatatatg acgtcacgtt taatcaggca gaaattgctt tcattactat ccatttacgt
    10201 ggagctaaac gaaaaaatct taatgataca tcattaaata atcgttgtga agaaaacaaa
    10261 attaaagcgt ttgttaacaa agtagaaatg atttcaggta tgacatttgc agatttggat
    10321 actttagtag atggactgac gctacacctt aatcctgcaa tcaatcgttt gcaagctaat
    10381 atcgagacct ataatccgtt aacagacatg attaagttca aatatccaag actatttgaa
    10441 aatgtaagat tagctttaaa tgattgttgg cctgatttga tttttccaga gagtgaaatt
    10501 gcttttatag ttttacactt tggtggctcg attaaaaacc aaggtaatcg atttttaaac
    10561 atattagtcg tttgcagcag tggtatggga actagtcgtc tattatcaac tcgtctagag
    10621 caagttttta gtgagattga gcgtattaca caagcatcag tcagcgattt gaagtcacta
    10681 gatttaagtc aatatgatgg cattatttct actgtgaatt tagacatcga caccccctat
    10741 ttaatggtaa acccattatt accagatagt gatatcagtt atgtcgcaca gtttttaaat
    10801 acaaagtcta cgttccaaga gacgcatgat aaatcatcaa acatgaatga taaggatgat
    10861 gttcatgttg aaacgaaaga tattgatggc aacacatctt ttgaaaatga acaaacttca
    10921 aacttaactt cagttttcga aaaacattta agtgacgaaa aatcagagca attaatgcat
    10981 catatgcgtt cgggtttaac tttgcttgat tcagtgaaaa tagttagtac cgaagttaaa
    11041 cagtggcaaa catatatcgc agattatcta tatcaatgcg atgcaataaa agatccaacg
    11101 tcattcgctg aactactaga gcaacgattg attgacaatc caggatggat attaagtcca
    11161 tatcctgttg caataccaca cctaagagac aatatgatta aacaccctat gattctaatc
    11221 acagttttag aagaaccgtt aacattgcct agtattcaaa atgacaatca aacaattaaa
    11281 tatatgattt ccatgtttat tcctgacaat gattttatgg catcactggt aagtgacttg
    11341 tccgaatttt taagtttgaa attagaatct attgatactt ttatggaaaa tccacaggaa
    11401 cttgaaacat tattaagaag caaattttta gaacgaatta aaaaacaatt tatttaggag
    11461 tgtacaaaat gagcgaatta tttagtaatg acaatatctt tttaaatgta aatgttaaca
    11521 gccaaaatga agcaattgaa aaagcaggta aagccttagt tgatagtggt gctgtaacag
    11581 atgcttatat tcaagcaatg aaagatcgtg agcaagttgt atcaacattt atgggaaatg
    11641 gcttagcaat tcctcatggc acagatgaag ctaaaacaaa tgtgattcac tcaggtttaa
    11701 cattattaca aatccctgaa ggcgttgact gggatggcga agtagttaaa gttgtcgtgg
    11761 gtattgctgg taaagatggg gaacatttag acttgttatc taaaattgca attacattta
    11821 gcgaagaaga aaatgtggat cgtatcgttc aagcaaaatc tgcagaagaa attaaacaag
    11881 tattcgagga ggcagatgca taatgaaagc agttcacttt ggtgctggta acataggtcg
    11941 tggtttcatt ggttatattc ttgcagacaa caatgttaaa gtaacatttg cagacgtcaa
    12001 tgaagaaatc attaatgctt tagctcatga tcatcaatac gatgttattt tagctgatga
    12061 gtctaaaaca acgacgcgcg tgaataatgt tgatgcaatt aattcaatgc aaccttctga
    12121 agcgttgaaa caagcaattc tagaagctga tattattaca acagctgttg gtgttaacat
    12181 actacctatt attgctaaat cttttgcgtc tttcttaaaa gaaaaaacaa accatgttaa
    12241 tattgttgct tgtgagaatg ccattatggc aactgataca ttgaaaaaag cggtacttga
    12301 tattactggc cctcttggta acaatattca ttttgctaac tcagcagttg atagaattgt
    12361 accattacaa aagaatgaaa atatattaga cgttatggtt gagccatttt acgaatgggt
    12421 tgttgaaaaa gatgcatggt atggtccaga actaaaccat attaaatatg ttgatgattt
    12481 aacaccatat attgaacgta aattattaac tgtgaataca ggacatgcat atttagcgta
    12541 tgctggtaaa tttgcaggta aagctaccgt attagacgct gtaaaagata gttcaattga
    12601 agctggctta cgccgtgttt tagctgaaac aagtcaatat attactaatg aatttgattt
    12661 tactgaagcg gaacaagctg gttatgttga aaaaataata gaccgtttca acaattctta
    12721 tttatctgat gaagtgacac gtgtcggacg aggtacgtta cgtaaaattg gccctaaaga
    12781 tagaattata aaaccattaa catatcttta taataaagat ttagaacgca ctggtttatt
    12841 aaatacagct gcattgttat tgaagtatga tgatacagga gaccaagaaa ctgttgagaa
    12901 aaataattac attaaagaac acggtttaaa agcgttttta agcgaatatg ctaaagttga
    12961 cgatggctta gccgatgaaa taattgaagc gtacaattca ctttcataat ttattgagct
    13021 ttgtttgaaa caagaagttt ccaacgttat tcgttaacaa tcagtaataa tgtagtagtt
    13081 ccgttgaatt aacaatatta aatttctgaa cataaaaaat actcccttca acatagacac
    13141 ttaacttgtg ttatgtatga aaggagtatt tttgcgttaa taatttgttt tattttcgag
    13201 ccacagccac ctattcaatg gctattggtc attactaaaa caaattcata ttaactgtta
    13261 gacttggtta cttagtaagg aatatttccc tatgaaataa ctagatgttc acattcttga
    13321 ataaatttta ttcttcagtt tgttggtctt tcttagtgaa tcttctaatt aagaatgcca
    13381 tacctgcacc tagagctaat tcagcatatg gtaaatcgtc attatgtgac ataccagtat
    13441 ctggtaaagt tttagcttgt tgtttaggct tattaacttt tccttgttgg tctgattttg
    13501 catttgcttt gttttcttca ggcttagtta cattaagcat atcttgatta gcactattgc
    13561 ttccatttga aactgtagct ggagatgcat tggcaccgtc gttttgcgta gctttattgt
    13621 ttgcatctgc agatgaacca attgatgctt gattatcttt tgtatctgct gttgccatgt
    13681 cagctttttg gctatcctca gtcgaagtca ttttatcttt tgcttctgaa gatgcagatg
    13741 ttgatggttt attcgaaact tcagtatcag ctttgcttgg cgatttatct gcttcgttag
    13801 atgcaacgtt agtttcagac ttaagttgtc ctgcatcagt ttgatttgac gtactttcct
    13861 ctttatcttt tgatgtatta gaaggtacat ttggttctgt tatgtctgct gaaggcaatg
    13921 tttcagttgt tgattcgacc atactttgat ttgttgaatc tctaccatct ttttctacct
    13981 tagctttatt ttcagatttt ggttgtgcaa ccttgccatt agttggttga gattcagcac
    14041 tattattcac ttcagcattt tgatttgaat catttacaga tgcattatct ttgctatcag
    14101 cagatgatgt tttttctgtg ctctcagttg ttgctggttt atcagttgtg ccattacccg
    14161 ttgccgaatt gtctattgat gcatctacac tagaattgtt attagctgtc ggtttatcat
    14221 ttgcatcatc agttgatgaa ttgtttgttg atgttgctgt tgtttcacct gttgctgcat
    14281 cattatgatt atttgtcgtt gttgaagacg tatctgcgtt ggcattatct gttgactcag
    14341 ttacattagg ttgtccagca ttgtctggct ctgcattaac atttgtattt gctgttgcgt
    14401 cattattatc tgaactgcta tgattagcat ccggatcatt ctgaggcaca atcgcttcaa
    14461 ttgcaggtat cgttacattt tgtaattctg caacttctgc atttgtttgt gttttatcta
    14521 aatcatcagc aaatctgtca aaatatctac ctaaatccgt acgtgcaatt tctttcgccg
    14581 atgcatctgc atctgcattt ttaattattt ctatttgctt gttaaccact tctctaattg
    14641 cttctaaagc atttttctta acttcaggat taatacgttg tgctttaagt tgttcaagcg
    14701 cactattttt gacagtagcg atttctgcat ttgtagtttg atcagaaata tcttcagttg
    14761 cttttgataa aatctcttct aaagcattcg taaatacttc tttttcttca gttgtagcat
    14821 cagagtcgac atttacacct gcttcaatct ggtctagtgc agtttctaat tcttcgatag
    14881 ctttttgttt ttctgttgag tcgatttgaa tgttatcaaa tgcttcaagt ccttgagctt
    14941 tcgctttttc aacttcggca gttgttgttg catcagtaat accttgttta gcttgatctg
    15001 taatttgttt aatcgttgct aatgcttcag ttttttcttc agcagttaac tggtcacttt
    15061 ggtcaataga ttctttcgtt tcctgtgctt tagcatcaat cgcttggttt gctttagctt
    15121 taacagtagc atctacttga actgcatcaa ttgtcgcttt accttgtgtt aatgcatcat
    15181 caacatcact attatccacg ccattattaa tgctttctaa cgcagtttga acattttggt
    15241 caacttgctt gattgcttgt tgtttttcat cttgtgttgc attagtgtca gctgaaatat
    15301 tatttttctt ctgatctgca taggcatata aatctgttgt agccgattct tttttacctg
    15361 ttggaatcgt ataatcgtta atattatcta agtcattatg aatttgtact tctatgtcat
    15421 ctttagaagt agcttgatta acgttttgat ccgcagtttg tttcaattca gcaagttttt
    15481 gtttcgcttc agcaatttca cttgaagtcg atgcgttaga gttatccgct tcattaactt
    15541 tagcattata tgcatctgca attttagcta aagcatcttt tttgtattca ctaaatgttt
    15601 taactgcatt aattttagct tttccatctc taaccgcagc atctacatag tcatcagttg
    15661 aagattgatc aatatttgtt ttcgcttgat ttaactctgt atcaacttct tgttttgcat
    15721 cattaatttc ttgttgtgac gcatttggcg tttgttcaat ttgtgttttc ttatcagctg
    15781 cagcttgatc taattctgtt ttacctgctg gtttcttaac aggatttgca tgaagttgtt
    15841 gaactttttg tactgctgcg tctttagcag ttgttacatc acctgttgaa tttgcaacat
    15901 taatattatt taaaccttct tcatatgctg ctctaactgg ccctatatct ttaccttttt
    15961 cttcattggt agtcgtattg tcattaagga tttcagttat tttattttgc atttcattta
    16021 acaattcagc tcttgcattc gttttaacat ctgttgatgc ttgaattggg tcgatggctt
    16081 gaactgcatt atcttttgca gtgtttacgt catcaattga ctgtgcattt tcaatatttt
    16141 gattaccttg cgttaactgt gcgtctactt gttgatttgc ttgttctttt tcttccgtag
    16201 tcgcatctgc agtttgtgca ataagtgctt tttgttcatt tgcttttgcc gttaattcac
    16261 ctttagcaac atctttaatt gtcgtatcag cagtaatacc ttgaatgtca gcaactgctt
    16321 gatcttttaa ttgcgtaaca tcgttagtcg tttgcgcatt taaaatatct tgatatgctt
    16381 tttctttagc tttagaaact aaatcttttg ctgcattttt ctcttcagtc gttgcacctg
    16441 tagtattatc aattgcttga ttttgagttg tcacagcttg atcaacatca ttttttgcat
    16501 tcgatttaac tgctgttgct ggttgtgtac tttgaatcga atttttaccc gcatctttgg
    16561 ctgtatctac accattattg tcagttgcag ctgtaatgtt attcttcgcg tctgtaactg
    16621 ctgttgctag ttgttgaatc gctgcttctt tttcttcatt tgttgcgttt tgatcgttat
    16681 taataaccgc tgtttgtgct gcttgtaatt ggtcgatctc atctttcgct gcttgtttct
    16741 tcataacttt tggtgttaca gcgttaattg ccgcttctgc attagttttt gcctcatcta
    16801 cttcagcgtt tgttgtagct gctgtgatag cttgatttgc tttagcattt tcagtattag
    16861 cttcagtttc tgcatcttgt ttttcttcat ctgttgcatc tggcgtagct tgaatctctt
    16921 gcaacttgtt gtttaatgta gtagtgattt cattacgcgc tgttgctttt ttattaacag
    16981 ttggtgtcac ttgatcaata ctagtttcac cagttgtttt cgcttggtct acatcatttt
    17041 gactattagc agcttcaatg ttgctatttg cttgtatcac agcattatct acgtccgcat
    17101 tagccgctgc aatttcttct gctgtaatgt cttgcgtttg agcgattgct gttttacgtt
    17161 cattcgcttt cgtagcaatt gcttgtttcg cattatcttt cgttgttgtt gctggctgaa
    17221 ttgcttcaat tttagcaatt tctgcatttt tagccgcttc aacttctgca tttgaatgtg
    17281 caccatcaat tgctgtatca gctgttgttt tttcagtttg aacttgttgt ttcgcagctg
    17341 ctttttcttc tgttattgca ccgttattag catcaattgc tgtttcttga gcttgtactt
    17401 tatctgcaat tgcttgtttc gcttgaggtt taacatttgc atcaggtgta atggctgcga
    17461 ttgtagcttc atttgtagtt tttgcattat ctacatcact gtttgctgcg gcattatcaa
    17521 tatcagcgtt tgcagtaact actgcttgat caactttgtc tttcgctgct tgttgttctt
    17581 cactagtcga atcattcatt gcttcgattg ctgttttacg ttcacttgct ttttgagcaa
    17641 tttctgcttt agcatccgat ttcttagttg ttgccgcttg aacttgatta attgcagcaa
    17701 taccattgtc tttagctgtt gttacagcac tgtttgtatt tgcagcatca agattcgttc
    17761 ttgcctcttg ttttttagca tctaattccg tatatgccgc ttctttttct tctgtagttg
    17821 aagcattgct attttggatt tcttgtttac gtgtattata tgcgttgtct acttccgtat
    17881 ccgctgcagg tttaactctt gattgtgttt gaatagcatt gattttatct aatacttttg
    17941 ctttagtatc agccacttct tgttgtgatt taacaacttg gatgtcatgt aaaccttctg
    18001 tttgagctgc atctactgct gcatttgcct ctgctacttc ttcatctgta gcatttgaaa
    18061 ctgtagcatt ttgagctttt ctagctgtag cagcttgttt aacttcttta taagcatcca
    18121 ttttagtttg agttgagtcc gtaatattct caattttgaa tatttcttcg tttttaacgc
    18181 gttctaaatc ttgtgcagtc gttgtcgctt ctatcgcttt aacacctgaa actttagctg
    18241 cattaatacg ttcaatggcc tccgctactt cttcatttgt tgtatcagga tttaaaggcg
    18301 cttgatcaat ttgcgcttgt acaacttcat caaattcttc aagagcttct gctttggctg
    18361 ttgttgcagg tgcagtttga ttaatatcat tgattgcttt tgttttaata gcttctactt
    18421 gcgcattcgt agttgctgca tcaatatctt taattgcctt tgtttcaatt ttaccaattt
    18481 tatcatttgc tacatctttt tcatcttgaa gagatgcagt tgacttttta atttgttgtt
    18541 tacgagttgt aactgcttgg ataatatctt gtttcgcttg tggtttaaca gttggtgtaa
    18601 ttacatcctg ttctaacact gcgataccat tatctttttc agttgtgaca ccttgcgcag
    18661 ttgtttgttt attaatttct gcgattgcat tatttttatc attgttaatt ttagttacaa
    18721 gtgctgccac ttcatcttgc gtaacttttt tactttgttg tgctgctgta atcttttctt
    18781 gtgctttagc atctaattca gcaattgctg cttgattatc aattaatgca gcttgtaatt
    18841 tagttactaa accatcaata tccgcttgag atgcacgatt tgcagtttca acatgattcg
    18901 catcttcatt taaaatagtg tctgcttgtt gtttaagttt attgtattct gcaattgatg
    18961 ctgttgtgta atgactatta tcaacttgtg agtttacttg ttgttgtaac gcatctttgt
    19021 tcatttcaac cgctactgaa aatggatctg cagttagtgt aacttctggt tgcgcattat
    19081 taattacaac atctgaagca gtacgatatg ttaatttttc attaaaatca atatttttag
    19141 gtgtatcgat attcgcaata ttaactttat atgataattt taaagattta tctgggaata
    19201 aaacttcttt cgtgtgtgta ccacgagccg ttgtcacacc ttggctagta aatgttactt
    19261 tattcgcagt ttgatcataa ttgacagtca tatttttcaa tactgtactg tcttcgttac
    19321 cattagggaa cgtagtagtt aacgaatcat taacgtacgt tacaccttgt ggtaatgtta
    19381 cttcgtattt gaattgatct gcttttaatg aagcaccaaa attaccattg ttaccgattt
    19441 cagtattaat agtatattct ttattgttag ttgctttcgg tgctaaatct ctatttttga
    19501 catataaatg tgatcctgag aatagaccta cattatcaat gaatgaatag tatttataac
    19561 catctttatt tgttgtaatt cttgaagcat cagcaactgc tgtattgtca ggaataaatt
    19621 gtaaatctaa gcgatcagca tcagttggca ctttaaataa atgtgcagta ccagtcttag
    19681 caacatttac agttgctaat tcagtatttt tcttagcatc tttaataact aaatttgttg
    19741 caccttgctt actattcgtt tgcatagtag taaagttaat aatcaattct gaatctggct
    19801 ttacatttac agtttttgaa ataccgttaa agttaccatg atctgtagaa tcatttgcat
    19861 tcacacgacc taatgcagct acattccctc tagcttgata gttttgaggg ttattcttat
    19921 caaacatatc gcttcgtctt aattctgagt taacgaaacc aatcttacca ttgttaatta
    19981 atgaataacc atttacttta tctgtaacag ttacagttgg atcctgtcta ttctcatctg
    20041 ttgatatggc tggatcatca aatgttaatg tagtattaat actgccttca ccagtattgc
    20101 tagcatttgg atcttgagtt tgtccgtttg ctgctacagc tgctgctggt tgcgctcctg
    20161 ctggagcatt cgctggctgt gtttgatttg ccggtgttgc attattatta ggtgttgctt
    20221 ggttatttcc ttgacctgct tgatttgcag gtgctgcttg atttccaggt tgtgcttgtg
    20281 cagcattatt cggatcagct tgattacctt gtccagctgg ttgtgttgta cctgctgccg
    20341 gttgtactgc gcctcctgct ggattagcct gtccaccttg atttgctgct gggtctgctt
    20401 gaccaccttg gttggcaggt gcagcaggct gtgctgtagg attagcttga gcaccagcat
    20461 ttgcgttagg ctgtgcattg gggtcagccg gttgtgctgg ttgattttgt gcaggctgat
    20521 tttgctctgc tgcagacgct gttgtcgggt taatagatat aaatgtaaca gtggcaatta
    20581 aagctgaaaa aataccgaca ttaaattttc tgatactaaa tttttgttgt ctgaataaat
    20641 tcattaagtc atcctcctgg ttgattattc tcgctgttaa atgatgtcac ttaatcaact
    20701 gttaagatat gtagtagcat ctgcgttaaa aacacaaagc aactctatct aattaaaatt
    20761 aattttatca tcattatata ttgagtacca gtgtatttta tattacatat tgattacttt
    20821 gtttttattt tgtttatatc attttacgtt tgtactataa attatttcta caaacacaaa
    20881 aaaccgatgc atacgcatcg gcttatttgt aatacagtat ttatttatct aatcccattt
    20941 tatcttgaac cacatcagct atttgttgtg caaatctttc agcatcttca tcagttgctg
    21001 cttcaaccat gacacgaact aatggttctg ttccagaagg tcttactaaa attcgacctt
    21061 ctccattcat ttctacttct actttagtca taacttcttt aacgtcaaca ttttcttcaa
    21121 cacgatattt atctgttacg cgtacgttaa ttaatgattg tggatatttt ttcatttgcc
    21181 cagctaattc acttagtgat ttaccagtca tctttattac tgaagctaat tgaataccag
    21241 ttaataaacc atcaccagtt gtattgtaat ccatcataac gatatgtcca gattgttctc
    21301 cgcctaagtt ataattaccg cgacgcattt cttctactac atatctgtcg ccaactttag
    21361 ttttattaga tttaattcct tcttgttcaa gcgctttgta aaaacctaag ttactcataa
    21421 cagtagaaac aatcatgtca ttattcaatt cttgattttt atgcatttct tgaccaataa
    21481 taaacataat ttggtcaccg tcaacgattt gaccattctc atctactgct atgattctgt
    21541 ctccatcgcc gtcaaatgct aacccaaaat cactttcagt ttcaacaact ttttctgcta
    21601 atttttcagg atgtgtagag ccacatttct cattgatatt atatccatca ggactacatc
    21661 caattgtttc agtatctgct tctaaatcac caaataagaa tggcgctagt gatgatgttg
    21721 aaccatttgc accatctaaa acaattttca aaccttcaaa gttaacatct actgttgatt
    21781 ttaaatagct caaatatttt tgtgcccctt caaagtaatc tgaataatgt acaatatcat
    21841 tgccaactgg tcttggtaat tctgggtttt cttgatccaa taatgcttca atttcatttt
    21901 cttgttcatc tgatagttta aaaccatctg attcaaagaa tttaatacca ttatctgcaa
    21961 ctggattatg agaggctgaa atcattacac ctaactctgc acccatatcg cgtgttaaat
    22021 atgcaacacc tggtgttgaa ataataccta atcgcatcac ttctgcacca attgaaatca
    22081 aaccagctat taatgctgat tctaacattt cacctgaaac tctagtatcg cgacctacaa
    22141 gtacacgtgg gtgtttttca cctttattat gtgctaaaac atagccaccg tatcttccta
    22201 atttaaatgc caattcaggt gttagttctt ggtttgcgac acctcttact ccgtctgtac
    22261 caaaatattt tcccattgtt tactctcctt taatttagct atttatttta catttatata
    22321 agccttcgtt tcacttggtt gtgctttagt gacatgttct ggtaaattga tttttacagt
    22381 cttttcagtt gattctgaaa taccatctaa atctacttct gcatcaactt cgcttatatt
    22441 ttgtaagtca tctcgactac cgaagatttc aatttcttta tcttctaaat caatcgaact
    22501 taactcttta tcatctgcta aactaccttt ctgtttaaca tttactttaa cctttttgct
    22561 aaaaggctct actttaactt gtaaattcac ttcattaggt tgaatcgata catttaattt
    22621 attcagtttt ttatcaaaag ccgttacttc tgcgacatct tttgtgtcac cattaatctt
    22681 tttattagtt ttaaaagtgg cttttaaata agcgatatca ttcaattgtt cttctccacc
    22741 tgttacttta actgtttgtg gtgaaacttc ttgctttgta attttataaa gtggatcaat
    22801 atcactctga cttacatcag gttgaactgt catcttttta gttactttgt tttcaagcgt
    22861 aatatttgct aatttaggtt ttacagaata atgaatgtca tcagctaacc ctttaacttg
    22921 atacttctct tgatattttc cagcttttgc atttgataaa tcaatcacta ctcttaaatc
    22981 ttctggattt tcaattttta ttatctttga ttgtggtcct gaaatagtca cattaactgt
    23041 ttcaggcgct tttgttaaat gcaaatcttt agtgttataa agaatttcaa cgggtacatc
    23101 ttgaatcgtt ttactagact tttgaccaag attaccagtg ttaaagatat ttccaaaaac
    23161 attgttaaca gataaaaaga aaaacaatgc caaaagaaag gcaataaatc tcaagcccca
    23221 tttactttct agcatattat ttcacacctt tcttttgaaa gcgtgtgcca aaccaatgtt
    23281 cagcaagcaa ctcttcaaaa atttcgtttg aaatgtctcg tcgtaatttt ccatcaaatg
    23341 ttaccgaaat atcaccagtt tcttcagata caataacggt aaatgcatca gatacttctg
    23401 aaataccaac cgcagctcta tgtcttgtac ccaaactttt agatatctta ggactatcag
    23461 acaatggcaa ataacttgct gctgctgcaa tcttagtgcc ttgaataatc attgcaccat
    23521 catgtaaagg tgtgttaggt ataaagacat taattaaaag ttcttgcgaa atatttgaat
    23581 ccattgcaat acctgtttca atataatctt gaagacctgt ttctttttca aagacaatta
    23641 atgcacctat acgtctttta gccatatatt gcacagcctt tgaaaccgat tgaatcaatt
    23701 tctcttcatc tttactatac gtattagaag tatagcgttt taaaaagcta cctctaccaa
    23761 gttgttctaa cgcacgtcta atttctggtt ggaatattac tattaaagct aatacccccc
    23821 attgaataac gatatcgaat aatttagatg ttgcagtcaa gttcaatatc atacttatct
    23881 gctgaccaat aacaattact aatatccctt taagtaattg tatcgcttta gttcccttaa
    23941 agaccgtgat gagaagataa agtacatacc aaactatcag taaatcaagg atactcgtta
    24001 caatttttaa cgtactgagg ttttgaaaaa agttggaaaa atccataaca tctcctccgg
    24061 gtaatatttt tccataatac ccattatacc aatcatttac atcactgtca tacgaacata
    24121 tatttaaata gaaaaaattt attttaaaga ttataactac tcttaatcat tttagtgaat
    24181 taaaaaaagt agtgcaaaaa gcaaaatata ctttatacac tacaaatcat ttatttataa
    24241 taaagtttca ccgaaaaatg ttccaactaa tgaaaccgct tgttcagcag tatgattatt
    24301 actgtcaatc aatggattta cttcaactaa atccattgat gttactgatt gagactgatg
    24361 taataattcc agcgcaaaat gactttctct atatgtaagt ccacctaata ctcttgtacc
    24421 tgtgcctggc gtttcaagtg gatctaaggc atcaacgtca agagataaat gtataccatc
    24481 tacattatga gtttttaaat aatctaatgt attttcaatt acagtctgaa ttcctagttt
    24541 atctatgtca gccatagtaa atgttttaat atttttatct ttaataaatt gtcgttcacc
    24601 tttatccaaa tctctcatac caattagcac aatattttca ggtttaatgg tattaatatt
    24661 gaattctaat agttcctttg gtccttcacc tgtcaaaatc cgaagtggca taccatgaat
    24721 atttccactt ggtgactctt caggtatatt taaatcacca tgtgcatcat accaaataac
    24781 acctaaatta ttataatgtt tacttattgc tgatactgaa cacctaccgc aatagaatga
    24841 tctccaccaa gaactagagg aaatctgtta ttttcaattg atgctgaaac ttctttattt
    24901 aatttttgag taacatctat aatttcatcg tagtttctta atccattttg ttcactttga
    24961 aatttttcaa tgtctacagc tgatacctta atatcccctt tgtcattgac atcaaggtct
    25021 aattgcttta gtcttggtat taaacctgca tatctaatcg cagttggtcc taaatcaaca
    25081 cctaattttc tttgtccaaa tgttgatggt gcaccaataa tatcaattgc ttttgtcttt
    25141 gtcataagcg tccccccttt gttatacata atttcagaat aatgtatacg cttactataa
    25201 tcaagtaata gccataacat aaccccttag cattctaatt ctcaaaaaat aaaaaaaagc
    25261 acttcccaag aatggaaagt gcaagtagtg agccatagag gattcgaacc tctgaccctc
    25321 tgattaaaag tcagatgctc taccaactga gctaatggct ctaatggctg ggctagctgg
    25381 attcgaacca acgagtgacg gagtcaaagt ccgttgcctt accgcttggc tatagcccaa
    25441 tatatagatg gtggaggggg gcagattcga actgccgaac ccgaaggagc ggatttacag
    25501 tccgccgcgt ttagccactt cgctacccct ccagcttatt cagttaatta ataatcaaaa
    25561 tggtggagaa tgacgggttc gaaccgccga ccctctgctt gtaaggcaga tgctctccca
    25621 gctgagctaa ttctccaata taatgactcc tacgggactc gaacccgtgt taccgccgtg
    25681 aaagggcggt gtcttaaccg cttgaccaag gagccatggc tccacaggta ggactcgaac
    25741 ctacgaccga tcggttaaca gccgatagct ctaccactga gctactgtgg
//
LOCUS       DAKPJH010000028        24995 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.028, whole genome shotgun sequence.
ACCESSION   DAKPJH010000028 DAKPJH010000000
VERSION     DAKPJH010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24995
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.028"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            29..697
                     /gene="queC"
                     /locus_tag="OY092_000982"
     CDS             29..697
                     /gene="queC"
                     /locus_tag="OY092_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HCX1075937.1"
                     /translation="MESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQR
                     HDTEIEVAKQIAQDQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARN
                     LLFLSFAGALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHT
                     PLMWLNKAETWKLSDELEVLDYIRTKTLTCYNGIIGDGCGECPACHLRQRGLNQYLES
                     KGAL"
     gene            699..1118
                     /gene="queD"
                     /locus_tag="OY092_000983"
     CDS             699..1118
                     /gene="queD"
                     /locus_tag="OY092_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HCX1075938.1"
                     /translation="MLQQIYPSTTHPYQFELNKDFNFSAAHHIPCEEAGICQNVHGHT
                     YFVNLKIVGDKLDDTGFLVNFSHLKKMIHGKFDHQLLNNLPAFKNKIPSTEIVAETIY
                     QIVKENLASLEHQPKCIQVFVRETPTSYVVFRPKEQV"
     gene            1122..1835
                     /gene="queE"
                     /locus_tag="OY092_000984"
     CDS             1122..1835
                     /gene="queE"
                     /locus_tag="OY092_000984"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HCX1075939.1"
                     /translation="MAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAF
                     TWDGSAKGDIKLMTAEEIYDELKRIGGDLFNHVTISGGNPALIKGIQELVNLFQDKGI
                     FSALETQGSKFQPWMTQIDDLTISPKPPSSTMTPDLKKLDEVITQCVPSSLNLKVVVF
                     DDKDYDFAKMIHHRYPNIPFYLQVGNPYLSDSVDNHTEKLLERYEQLVDLVMQSNDMN
                     HVYVLPQLHTLLWSNKKGV"
     gene            1934..2518
                     /locus_tag="OY092_000985"
     CDS             1934..2518
                     /locus_tag="OY092_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075940.1"
                     /translation="MIVYILINIAIVILITGFNLYRHQMQHLSLSAMLLSITINAFIN
                     TFIIDKYNFITLCTITMFIIWTILQFYIDKKLKPVYITDQKFIAIILTIVVSLTQRVT
                     DFSSTQSIYMSIPFLAPAIFIIGGIMLFISTFNNLDETAENNNKIKKLMIKGLIIINI
                     SFIVMMVLTPYWYLYLIVYLIFLLFLLWQKVYKF"
     gene            2798..3238
                     /locus_tag="OY092_000986"
     CDS             2798..3238
                     /locus_tag="OY092_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HCX1075941.1"
                     /translation="MNTKYFLAVGAVAAVLTLGACGNSNSQDQGNKTEQKTKSEDSNV
                     KTDKTKHLTGTFSSKNGETVEGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDIKNGK
                     EIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAHVIFGGAKLK"
     gene            3580..4053
                     /locus_tag="OY092_000987"
     CDS             3580..4053
                     /locus_tag="OY092_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCX1075942.1"
                     /translation="MNKLLLLVTFIIRVGSGIVMLMQGYEKLTGGFTLKGLVPVIANN
                     TDSPEWYKWFFANIVAHTTSLFDIIVPLGEIAIGLGLIFGVFAYAASFFGAFVMINYI
                     LADMIFTYPLQLTFFILLLMSHSLLKQISLKEIINYFRGRKNRGEKIDDPLTDRG"
     gene            4028..4714
                     /locus_tag="OY092_000988"
     CDS             4028..4714
                     /locus_tag="OY092_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1075943.1"
                     /translation="MTHLLIVDDEQDIVDICQTYFEYEGYKVTTTTSGKEAISLLSND
                     IDIMVLDIMMPEVNGYDIVKEMKRQKLDIPFIYLTAKTQEHDTIYALTLGADDYVKKP
                     FSPRELVLRINNLLTRMKKYHHQPVEQLSFDELTLINLSKVVTVNGHEVPMRIKEFEL
                     LWYLASRENEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKESFTTYTITTVW
                     GLGYKFERSR"
     gene            4714..5769
                     /gene="saeS"
                     /locus_tag="OY092_000989"
     CDS             4714..5769
                     /gene="saeS"
                     /locus_tag="OY092_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SaeS"
                     /protein_id="HCX1075944.1"
                     /translation="MVLSIRSQIIIGVVSSILLTSTILAIAYILMWFNGHMTLTLTLT
                     TIITSCLTLLICSIFINPLIQKIKQFNIKTKQFANGNYASNDKTFNSPKEIYELNQSF
                     NKMASEITQQMNQIKSEQQEKTELIQNLAHDLKTPLASIISYSEGLRDGIITKDHEIK
                     ESYDILIKQANRLSTLFDDMTHIITLNTGKTYPPELIQLDQLLVSILQPYEQRIKHEN
                     RTLEVNFCSEIDAFYQYRTPLERILTNLLDNALKFSNVGSRIDINISENKDQDTIDIA
                     ISDEGIGIIPELQERIFERTFRVENSRNTKTGGSGLGLYIANELAQQNNAKISVSSDI
                     DVGTTITVTLHKLDITS"
     gene            complement(5841..6824)
                     /gene="csbB"
                     /locus_tag="OY092_000990"
     CDS             complement(5841..6824)
                     /gene="csbB"
                     /locus_tag="OY092_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosylation protein
                     CsbB"
                     /protein_id="HCX1075945.1"
                     /translation="MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFID
                     DGSTDTTIDEMQHLATIDRHVSYISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQH
                     PPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD
                     FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNY
                     GIDGLISFNSKPLRMMIYLGLFIFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLL
                     GGIQLISIGVVGEYIGRIYYEVKARPKYIIQATNLSSIENAEKDTHKVYSK"
     gene            complement(6956..7795)
                     /locus_tag="OY092_000991"
     CDS             complement(6956..7795)
                     /locus_tag="OY092_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCX1075946.1"
                     /translation="MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAF
                     DTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTNYL
                     DLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVN
                     QIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDDPVIVKIAEKYHKTPAQVVL
                     RWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALNRNARQGKDPDDVKIG
                     DLK"
     gene            complement(8017..9366)
                     /locus_tag="OY092_000992"
     CDS             complement(8017..9366)
                     /locus_tag="OY092_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCX1075947.1"
                     /translation="METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEG
                     NKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPTALT
                     TTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
                     GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHA
                     KDIMVPRTQMITLNEPFNVDELLETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEY
                     ASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDEYGGTAGILTMEDIL
                     EEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGW
                     LQSRNTNLQKDDYVDTTYDRWVVSEIDNHQIIWVMLNYEFNEARPTIGQSDEDEKSE"
     gene            complement(9587..10768)
                     /gene="nagA"
                     /locus_tag="OY092_000993"
     CDS             complement(9587..10768)
                     /gene="nagA"
                     /locus_tag="OY092_000993"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HCX1075948.1"
                     /translation="MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEVNDKAAIDN
                     DTTNKIQVIDAKGHHVLPGFIDIHIHGGYGQDAMDGSYDGLKYLSENLLSEGTTSYLA
                     TTMTQSTDKIDNALINIAKYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRP
                     FIDKIKHFQETANGLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVE
                     RGAKHVTHLYNAATPFQHREPGVFGVAWLNDALHTEMIVDGTHSHPASVAIAYRMKGN
                     ERFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGSILKMNHGLRNLISF
                     TGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTF
                     S"
     gene            complement(11076..13034)
                     /locus_tag="OY092_000994"
     CDS             complement(11076..13034)
                     /locus_tag="OY092_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCX1075949.1"
                     /translation="MRVTELLTKDTIAMDLMANDKNGVIDELVNQLDKAGKLSDVASF
                     KEAIHNRESQSTTGIGEGIAIPHAKVAAVKSPAIAFGKSKAGVDYQSLDMQPAHLFFM
                     IAASEGGAQTHLDALAKLSGILMDENVREKLLHASSPEEVLAIIDHADDEATKEEEAE
                     AEAQQVAAAEQSSKQSNEPYVLAVTACPTGIAHTYMARDALKKQADKMGIKIKVETNG
                     SSGIKNHLTEQDIENATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELINKALD
                     TSRKPFVARDGNRKGHSNDNQEKLSPGKAFYKHLMNGVSNMLPLVISGGILMAIVFLF
                     GANSFDPKSSDYNAFAEQLWNIGSKSAFALIIPILSGFIARSIADKPGFASGLVGGML
                     AISGGSGFIGGIIAGFLAGYLTQGVKAMTRKLPQALEGLKPTLIYPLLTVTATGLLMI
                     YVFNPPASWLNHLLLDGLNNLSGSNIVLLGLVIGAMMAIDMGGPFNKAAYVFATGALI
                     EGNAAPITAAMIGGMIPPLAIATAMLIFRRKFTKEQRGSIIPNYVMGMSFITEGAIPF
                     AAADPLRVIPSMMIGSGIGGAIALGLGSRITAPHGGIIVIVGTDGAHLLQTLIALVVG
                     TLVSALIYGLIKPKLTETEIEASKSMDE"
     gene            complement(13040..13960)
                     /gene="pfkB"
                     /locus_tag="OY092_000995"
     CDS             complement(13040..13960)
                     /gene="pfkB"
                     /locus_tag="OY092_000995"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HCX1075950.1"
                     /translation="MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSR
                     VLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEIN
                     APGPHITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVV
                     DAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL
                     GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLTIEKAFQQAVACG
                     TATAFDEDLATRDAIEKIKSQVTISVLDGE"
     gene            complement(13957..14721)
                     /locus_tag="OY092_000996"
     CDS             complement(13957..14721)
                     /locus_tag="OY092_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCX1075951.1"
                     /translation="MMIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSK
                     LQQLGKLQRVHGGAMLKENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDA
                     GSSTLELIKYIQAKDIIVVTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEI
                     LRRYCFDKAFIGMNGLDIELGLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFA
                     RVPLLESTTVITSEKALNQESLKEYQQKYHFIGGTL"
     gene            complement(14971..15453)
                     /gene="ybaK"
                     /locus_tag="OY092_000997"
     CDS             complement(14971..15453)
                     /gene="ybaK"
                     /locus_tag="OY092_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HCX1075952.1"
                     /translation="MAKNKKTNAMRMLDRAKIKYDVHSFEVPEEHLSGVEVAELIQAN
                     VKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAALVGEKKLQLMPLDNLKNVTGYIR
                     GGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLIAITKGKIGEVIHE
                     "
     gene            complement(15627..16079)
                     /locus_tag="OY092_000998"
     CDS             complement(15627..16079)
                     /locus_tag="OY092_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075953.1"
                     /translation="MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNA
                     INVSTEDTYKKKMDILNIHTAKASEVNENVKKQNHFKHRVNANKSNSFNEQECQVIAD
                     RYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK"
     gene            complement(16376..17542)
                     /gene="norA"
                     /locus_tag="OY092_000999"
     CDS             complement(16376..17542)
                     /gene="norA"
                     /locus_tag="OY092_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorA"
                     /protein_id="HCX1075954.1"
                     /translation="MNKQIFVLYFNIFLIFLGIGLVIPVLPVYLKDLGLTGSDLGLLV
                     AAFALSQMIISPFGGTLADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGG
                     MSAGMVMPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFY
                     FAGALGILAFIMSVVLIHDPKKSTTSGFQKLEPQLLTKIDWKVFITPAILTLVLAFGL
                     SAFETLYSLYTSYKVNYSPKDISIAITGGGIFGALFQIYFFDKFMKYFSELTFIAWSL
                     IYSVIVLVLLVIADGYWTIMVISFVVFIGFDMIRPAITNYFSNIAGDRQGFAGGLNST
                     FTSMGNFIGPLIAGALFDVHIEAPIYMAIGVSLAGVVIVLIEKQHRAKLKQQDL"
     gene            17751..18173
                     /locus_tag="OY092_001000"
     CDS             17751..18173
                     /locus_tag="OY092_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCX1075955.1"
                     /translation="MKLQKSNHTILLVLEKGEDIVECITNFADDQDLTFTSVSGIGAC
                     DDVVLKFFNLTTKQYEEKHITEPLELTSLLGNISRLENGHFAHLHATFGTQSYETFSG
                     HLAKAIVSATAEIILTVTDLDIQRSFKDAVGLNLLDPQ"
     gene            18359..18976
                     /locus_tag="OY092_001001"
     CDS             18359..18976
                     /locus_tag="OY092_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HCX1075956.1"
                     /translation="MQSRYIARIYFLILFIVSLFETKIFQFMTLNLFLAYIPFELSLL
                     LRLFKPNKKYEWPLFIIYSFIFVLLLPNTFYMVTDLIHLNQFQFNFYAGLNLSEWKYF
                     TYLLLGVFLAVYVMILIYFEILTLTSHRWLNRLIVVVLMFLNGFGIYIGRFLRLHSVY
                     FFNEPLHVLNHILESLTLKTAMFVCFMVVMQAAILLFGKGVRLNK"
     gene            18973..19257
                     /locus_tag="OY092_001002"
     CDS             18973..19257
                     /locus_tag="OY092_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075957.1"
                     /translation="MTINIIVLIVSIIVFQLIIGHIWHDIGLSYLRSILLMMLPFGLG
                     VFIQQVSYYERQYPKWQVPQNIKVRLKYIYLATFLEYVVLYLTLFTDILR"
     gene            complement(19412..20785)
                     /locus_tag="OY092_001003"
     CDS             complement(19412..20785)
                     /locus_tag="OY092_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HCX1075958.1"
                     /translation="MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSA
                     SDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYHLE
                     EYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYKKWRPYLRHRD
                     VYHYDLKSFEDFVIASPDDLVFDDITFGSSQIIEQNKWQHFLDQDIQNYESGRDYLPE
                     VLTSQLSVALAYGLLDIIEIFNDLLARYDEDEANYEAFIRELIFREFYYVLMTQYPET
                     SYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQF
                     LTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERF
                     DAKALYIKTYLPIFNQIDAKYLHDTQRNESNLFEQGIELGSHYPRQMVDHQEKRTQVL
                     ATFKALD"
     gene            complement(20871..22424)
                     /locus_tag="OY092_001004"
     CDS             complement(20871..22424)
                     /locus_tag="OY092_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HCX1075959.1"
                     /translation="MSEEKHVVEHEQQKKEKTKKQYKPFWIVMSFIILIVVLLLPAPS
                     SLPIMAKAVLAILAFAVIMWVTEAVSYPVSATLIIGLMILLLGFSPVQNLGEKLGNPK
                     SGSAVLAGSDLLGTNHALTLAFSGFATSAVALVAAALFLAAAMQETNLHKRLALLVLS
                     IVGNKTRNIVIGAIIVSIVLAFFVPSATARAGAVVPILLGMIAAFKVSKDSKLASLLI
                     ITSVQAVSIWNIGIKTAAAQNIVAINFINHQLGFDVSWGEWFLYAAPWSIVMSIALYF
                     IMIKVMPPEINTIEGGKDLIKEELHKLGPVSAREWRLIVISMLLLLFWSTEKVLHPID
                     SASITIIALGVMLMPKIGVMTWKHVENKIPWGTIIVFGVGISLGNVLLKTGAAQWLSD
                     QTFGVLGLKHLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLTSTLHLGDQS
                     IGFVLIQQFVISFGFLLPVSAPQNMLAYGTGTFTVKDFLKAGIPLTIVGYILVIVFSM
                     TYWKWLGLL"
     gene            complement(22707..22994)
                     /locus_tag="OY092_001005"
     CDS             complement(22707..22994)
                     /locus_tag="OY092_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075960.1"
                     /translation="MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMT
                     LFGLFFAYNVVILFIAFIKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF"
     gene            complement(23029..23937)
                     /locus_tag="OY092_001006"
     CDS             complement(23029..23937)
                     /locus_tag="OY092_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HCX1075961.1"
                     /translation="MEQIMINHYVHFSRLVQGFWRANEWKMTAKELNYFINELVERGI
                     TTMDHADIYGDYQCESLFGNALDLSPELRNKIQIVTKCGIILPSKQFDFTNGHRYDLS
                     SKHIVKSVEQSLINLNVDYLDSLLIHRPSPLMDPEQVADALTKLVKQGKLKSFGVSNF
                     NHSQYQLLNQYIMKERLHISINQLELSPYHVDSLQDGTMDSMYQNHVQIMAWSPFAGG
                     KIFDKEDIKAQRIMKVVQSIADKYGVSDTAVMIAWLVKIPHRIMPILGTSQLKRIDQA
                     IEGLQLNLDDQSWFDIYTAIIGQDIP"
     gene            complement(24040..24966)
                     /locus_tag="OY092_001007"
     CDS             complement(24040..24966)
                     /locus_tag="OY092_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HCX1075962.1"
                     /translation="MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIM
                     NEFGTFDIDSNSISNEIEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGI
                     AHSLELLVACQDPQIVNFFEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMII
                     INKIDLVTDDSLEKIDKQLSIICASIPTYKTTYGQVSLEELDLPGKDREISSHHHHHH
                     GIKSMTYTFTGPIDRQLFYQFIMKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYG
                     IIGMHLPLTIVIIGETLDTNHIRNQLDMLQFT"
BASE COUNT         8379 a         4505 c         3531 g         8580 t
ORIGIN      
        1 tattattaat gataggagca attacaaaat ggaaagtgta ttaaataatg aaaaagccat
       61 cgttgtcttt agtggtggtc aagacagtac aacatgtctc ttttatgcaa aaaaacattt
      121 caaagaagtt gaactcgtaa cgtttaatta tggccaaaga catgatactg aaattgaagt
      181 cgcaaaacaa attgcacaag atcaaggaat gaaacatcac gttttagata tgtcattatt
      241 atcacaactt actccaaacg cattaacaca acatgatatg gaaattacta ataatgaaga
      301 tggtatacct aatacatttg ttccagctag aaatttactt ttcttgtcgt ttgcaggcgc
      361 tctagcttat caaattgggg ctaagcatat tattacaggc gtatgtgaaa cagacttttc
      421 aggctaccca gactgtcgcg atagttttat aaaatcaatg aacgtaacat taagcctagc
      481 tatggacaaa gattttgtca ttcatactcc tttaatgtgg ttaaacaaag cagaaacgtg
      541 gaaattaagt gatgaactcg aagttttaga ttatattcgt acaaaaacat taacatgcta
      601 taacggtatc attggggatg gctgtggtga atgtccagct tgtcatttac gtcaacgtgg
      661 actaaatcaa tatcttgaaa gtaaaggagc gctttaaaat gttacaacaa atctatccta
      721 gtacaacaca tccatatcaa ttcgaattaa ataaagattt taatttttca gctgcacatc
      781 acattccatg tgaagaagca ggtatttgtc aaaatgtcca tggtcatact tactttgtta
      841 atttaaaaat tgtcggtgat aaactagatg acactggctt cttagtgaac tttagccatt
      901 tgaaaaagat gatacacggt aaatttgacc atcaactgtt aaataactta cctgctttta
      961 aaaacaaaat cccttcaact gaaatcgtag cggaaacaat ttatcaaatt gttaaagaaa
     1021 atttggcatc gctcgaacac caaccaaaat gtattcaagt atttgtaaga gaaacaccaa
     1081 caagttatgt cgtatttaga ccaaaggaac aggtgtaact aatggctaaa attcctgtac
     1141 tcgaaatatt cggcccaacc attcagggtg aaggtcgagt aatcggtaga aaaacgatgt
     1201 ttgtgagaac agctggatgt gattatcgct gtagctggtg tgattctgca tttacttggg
     1261 atggtagtgc taaaggcgat ataaaactca tgaccgctga agaaatttat gatgaattaa
     1321 aacgtattgg tggcgattta tttaaccacg ttacaatttc tggtggtaac ccagcattaa
     1381 ttaaaggtat ccaagagtta gttaacttat ttcaagataa aggtattttc agcgcactgg
     1441 agacacaagg cagtaaattc caaccttgga tgacacaaat tgatgattta acgattagtc
     1501 caaaaccacc aagttcaact atgacaccag atttaaaaaa gttagatgaa gtgattacac
     1561 aatgtgtacc ttcctcatta aacttaaaag tagttgtatt cgatgataaa gattatgatt
     1621 ttgccaaaat gatacaccac cgttatccaa atattccctt ctatttacaa gttggtaacc
     1681 catatttatc agacagcgta gataatcata ccgaaaagtt gttagaacgc tacgagcagt
     1741 tggtggattt agttatgcaa agtaatgata tgaatcacgt ttatgtgtta ccacaacttc
     1801 atacattact ttggagtaat aaaaaaggtg tataaaggat aacttatttt actttttaca
     1861 agtcatatct aatgaataac aatatattaa ttgatataat agttgattga agtataacga
     1921 acaggagtcc atcatgattg tatatatatt aattaatatt gctatcgtca tacttataac
     1981 tggattcaat ttatataggc atcaaatgca acatttatca ttaagtgcaa tgttgttatc
     2041 tattacgata aacgccttta taaatacatt cataattgat aaatataact ttattactct
     2101 gtgtactata acaatgttta tcatttggac gatactacag ttttacattg ataaaaaatt
     2161 aaaacctgta tacattacag accaaaaatt tattgctatc atattaacga ttgttgtcag
     2221 tttaacacaa cgtgttaccg acttttcaag tacacaatca atatatatgt ctattccatt
     2281 tttagcccct gccattttca tcattggtgg tattatgttg tttatttcaa catttaataa
     2341 cttagatgaa actgctgaaa ataataacaa aataaagaaa ctaatgatta aaggacttat
     2401 cattattaac atttcattta tcgttatgat ggttttaaca ccatattggt acttgtattt
     2461 aatcgtctat cttattttct tgttgttttt attgtggcaa aaggtttata aattttaata
     2521 ccaaaactat aaaacacttc tgatattctt agttcgatat atcagaagtg ttttatagtg
     2581 ataactagtt tagataaata ttttcttact taaaaaaccg ccctcttctt attttgcctc
     2641 ctatttattt aaatcagaca attattttca ttttcaaatt attctttctt caatattagt
     2701 taagcgatat ttaaacgaag ttaagaatta gttaatggca tattatttgc cttcatttta
     2761 aacttaactt atcaaattga agaaatgagg agttagcatg aatacaaaat attttttagc
     2821 agttggtgct gttgccgctg tattaacttt aggcgcttgt ggtaattcta attcacaaga
     2881 tcaaggtaac aaaactgaac aaaaaacaaa gtcagaagac agcaatgtta aaactgataa
     2941 aacaaaacac ctaacaggta cattcagttc taaaaacggt gaaactgttg aaggtaaagc
     3001 tgagattaaa aatggtaaat taatgcttac taactacaaa tcatcaaaag gtccagattt
     3061 atacgtctac ctaacaaaaa atggcgacat taaaaacggt aaagaaatcg caatggttga
     3121 ctacgataaa gaaaaacaaa catttgatct taaaaatgta gatttaagca aatatgatga
     3181 agtaacaatc tattgtaaaa aagctcacgt catcttcggc ggcgctaaat taaaataatc
     3241 aatttctgag ttaaactttt atttacaaca tactattact atacattaca aattttaaaa
     3301 atatacatta cactcattac tcaatggaaa gcgtatgatt tcacagcccc cctagcttgt
     3361 agaaatcata ctttcctttt ttcaatatat atacaactat taaatcccat aagattgtag
     3421 agcacataag taaatatttt tagagcttga ggtttgttta gcttaagcag cccatgagct
     3481 caaacacttc ctgttcacat aacactacaa atcgcattat gttgcttaat cttatgttta
     3541 tataaattac acacaataaa tagaaagaat gtgaacatca tgaataaatt attgctactc
     3601 gttacattta tcattcgtgt gggttcaggt attgttatgt taatgcaagg ctacgaaaaa
     3661 ttaacgggcg gatttacgct gaaaggttta gtcccagtca tagctaacaa tactgattca
     3721 ccagagtggt ataagtggtt tttcgcaaat atagttgcac atacgacgtc attatttgat
     3781 attattgttc cacttggaga gattgcaatt ggattaggtt taatttttgg agtttttgca
     3841 tatgctgcta gtttctttgg agcctttgtt atgataaatt atatcttagc agatatgata
     3901 tttacgtatc ctcttcaatt aactttcttt atccttttac taatgagtca ctcattgtta
     3961 aaacagattt cacttaaaga aatcattaat tactttagag gtcgtaagaa cagaggtgaa
     4021 aaaatagatg acccacttac tgatcgtgga tgatgaacaa gacattgtag acatttgtca
     4081 aacctatttt gaatatgaag gttacaaagt aacaacgaca actagcggta aagaagcaat
     4141 ttctttacta tcaaatgata ttgatatcat ggtacttgat atcatgatgc cagaagttaa
     4201 tggttacgac attgtcaaag aaatgaaaag gcaaaaatta gatatcccct ttatctattt
     4261 aactgccaaa acacaagaac atgataccat ttacgcctta actttaggtg cagatgacta
     4321 tgtcaaaaaa ccatttagtc caagggaact cgttttacgt attaataatt tacttacaag
     4381 aatgaagaaa taccatcatc aaccagttga acaactgtcg tttgatgaat taacacttat
     4441 taacttaagt aaagttgtga ctgtaaatgg tcacgaagtc cctatgcgta ttaaggaatt
     4501 tgagttattg tggtatttag cttctagaga aaatgaagtt atttctaaat cagaattact
     4561 tgaaaaagtt tggggatatg actattacga agatgctaat accgtgaatg tccatataca
     4621 ccgtattaga gaaaaattag aaaaagagag ctttacaaca tataccatca caactgtatg
     4681 gggattagga tataaatttg aaaggagccg ataatggtgt tatcaattag aagtcaaatc
     4741 attattggcg tcgtatcgag tatactatta acttcaacta ttttagcaat tgcatatatt
     4801 ttaatgtggt ttaacggcca tatgacacta actttgacct taacgacaat aattacaagc
     4861 tgtttaacct tattaatatg tagtattttt attaatccac ttatacaaaa aattaagcag
     4921 tttaatataa aaactaagca atttgctaac ggaaattacg caagcaatga taaaacgttt
     4981 aattcaccaa aagaaattta tgaattaaat caatctttta ataaaatggc ttctgaaatt
     5041 acgcaacaaa tgaatcaaat taaatccgaa caacaagaaa aaacagaact gattcaaaac
     5101 ttagcccatg atttaaaaac acctttagca agcattattt catattctga aggactacgt
     5161 gatggtataa tcacaaagga tcatgagatt aaagagtcat acgacatatt aattaaacaa
     5221 gcaaacagat tatcaacatt atttgatgat atgactcata ttatcacttt aaatacaggt
     5281 aaaacatatc ccccagaatt aatacaacta gaccaattac ttgtatcaat attgcaacca
     5341 tatgagcaac gtatcaaaca tgaaaaccgc acattagaag tgaatttctg tagcgaaatt
     5401 gatgcatttt atcaatatcg aacgccactt gagcgtattt taacaaactt acttgataat
     5461 gcgctaaaat tttcaaatgt tggtagtcgc attgatatta atattagtga aaacaaagat
     5521 caagatacta tcgacattgc tattagcgat gaaggtattg gcattatacc agaactacaa
     5581 gaacgtatat tcgaacgtac attcagagta gaaaactctc gtaatacaaa aacgggtggt
     5641 tctggattag gcttatatat agctaatgaa ctcgcgcaac aaaataacgc aaaaatcagt
     5701 gtaagcagtg atatagatgt aggaactacg ataactgtga cattacacaa attagacatt
     5761 acgtcataat ccgatttatt tataaaataa aatgcaaaga ctaaaaagaa gctcccatta
     5821 atgagggctt ctttttttgt ttatttagaa taaactttat gggtatcctt ctcagcattt
     5881 tcaatacttg aaagatttgt agcttgaata atatatttag gacgtgcctt aacttcataa
     5941 tatatcctgc caatatattc acctacaaca ccaattgaaa ttaactgtat gccgcctaat
     6001 aataaaatag ctgcaatcgt tgaaaaatat cccggaatat taacaccaga tatcataata
     6061 ttgatgaata aatagataat atatagaacg cttattgaaa agataaataa accaagataa
     6121 atcatcattc tcaaaggttt actattaaag gaaatcaatc catcaatacc ataattaaat
     6181 aactttttaa atgaccattt agattcacct ttttgtctct caacattttg atacgtaaac
     6241 actttagtat tatagcctat ccattcaaat aacccttttg aaaatcgatt atattcttca
     6301 agtgatgcaa tggatttaac agctctttgg cttaaaagtc taaaatcacc aacaccatca
     6361 tcaaattgta cttcttctac aaagcaatta actaacttat aatacaaatg gcttaatgtt
     6421 ttgcgactaa aattttcacc acttctatca cgctttgcaa tcacttgatc atagccttcc
     6481 ataaaacctt caaccatttt cggaatatat tcaggtggat gttgcaaatc acaatctatc
     6541 atgatgactg catcaaattc agtactatgc tggtaacctg caatcatagc tgcttctttt
     6601 ccaaaatttc tactaaaaga aatatagctg acatgtctat ctattgtggc aagatgttgc
     6661 atttcatcta tagtggtatc cgtactacca tcatctatga aaagcatatt ataatcatag
     6721 cctttcacac tactatcttg tgaaagtatt tcagttaatt gttgatgtgt ttgtgtaatg
     6781 acttcccctt cattaaaaca aggaatgacg actctaattt tcatctatgt ccatcctttt
     6841 tatttaaaag attttgaatg tacctgagta ttgttttatc aaatagtaaa aaccaactca
     6901 tttattttaa tgtacacatt aaaaggcatt cataaacgta aaatttaaca tccagttatt
     6961 ttaaatcccc aattttcaca tcatctggat ctttaccttg tcttgcattt ctatttaaag
     7021 catcaatttc agctacttct gttaattcta aattaaaatc taaaatatct atattttctt
     7081 gaatgcgttt aggtgtctga gattttggaa taataattct attgtgtgct aaatgccaac
     7141 gcaatacaac ttgtgctggt gttttatgat atttttcagc aattttaaca atgacagggt
     7201 cgtctagtag tcctctattt ctcatcaaag gcatccatgc agtcacttta atatcgtgac
     7261 gatcacaaaa ttcttgtaat tcttgttggt taaaatatgg atgtacctca atttgattca
     7321 ccattggttt gatacttgat tgagccatta atttttctag atgatgaaca ttaaaattac
     7381 atacacctat tgcttttacc ttaccttgct cgtaaagttc ttccatagct ttatatgttt
     7441 ctaaaaatag accatctgct tcacaaggcc aatgtattag aaataaatca agataattag
     7501 tttgtaaatt ttcaatcgat ttgttgaaat attcgaatgt tttctcataa ccttgatagt
     7561 cattccataa cttcgttgtt ataaacaaat cttctctatc gacgccatta tcctttaatg
     7621 ctcgacctag tgaagcctca ttatcataaa agtatgcagt atcaaacgct ctatagcctg
     7681 cgtcaattgc agcatttaca actttagtca tatcttcgtc agagatttta taaacaccta
     7741 atccaactga aggcatcggg tatccattat ttaatatttg tatctcattc aacatcttta
     7801 tatctctcca atctatgtat cttttatatc tttacattac cctaattttt tcaacaaact
     7861 caattaatac gaattatcgc tttcaataaa aaatattcat taaatcatta aagatattaa
     7921 gttccaatac tattttcact tttcattaat tttagtcaaa aaaataacca accaaaaatg
     7981 aattaaatca ttcttagttg gtttatatat tattatctat tctgattttt catcttcatc
     8041 agactgtccg atagtaggtc tcgcttcatt aaactcatag tttaacatca cccaaataat
     8101 ttggtggtta tcgatttctg aaacaaccca gcgatcataa gttgtatcca cgtaatcatc
     8161 tttttgtaag ttggtattac gagattgtaa ccatccacct atcgtatcaa tatcctcaga
     8221 gtcatcaaat tctataccga actcttcagt taaatcatcc aatagtactc taccatttac
     8281 ttggaatgtc ttattatcaa ttttaacgat atcattcact tcatcatcat caaattcatc
     8341 acgaatttcc ccaacgattt cttctaaaat atcttccatc gttaaaatac ctgccgttcc
     8401 accatattca tctataataa gactcatatg tacatgttca cgttgcattc taattaatgc
     8461 atcactgata cgtgttgtct ctgaaatcat tggcaactca tgtatatagt ttgctatttt
     8521 aatagttttt ccagaagcat attcagttaa aaattctttg acgttaataa atcctttaat
     8581 gtggtcttta tcaccatcat cagtaattgg ataacgcgta aattgatgtt cttttattgt
     8641 ttctagtaat tcgtctacat taaaaggttc atttagtgta atcatttgag ttctaggtac
     8701 cattatatct tttgcatgtc tttcatcgaa tgaaaagata ttttgcatat acgccaattc
     8761 agtttggttg atttctccac cattataact attgttaata ataattttga tttcttcttc
     8821 tgacattgca tcggtttggg catcaggatt tacaccaaac attctaataa taacacgtgc
     8881 agaaccattc atcagccaaa tcaatggttt cataatgtta ccgaaataga acaatggtct
     8941 tgcatatact aaagcaagct tttcagtatg ttgaatcgct atagatttag gcgctaattc
     9001 accaagtact acatgcaaat acgtaacgat tataaatgat actgcaaacg aaatcgtcgt
     9061 cgttaatgca gttggtaaat tgattgcttc aaatatcggg tgtaatagct tttcaaacgt
     9121 tggttcacca agccaaccta accctaaaga tgttactgtt atacctaact gacaagcaga
     9181 aagataataa tctagattag caatcatctt ttttactatt ttagcaggtt tatttccttc
     9241 atctgctagc tgttcaattc ttgttgctct aatttttact aatgcaaatt ctgaaccaac
     9301 aaatacagtg gttaatgcaa ttaatagaat aaatataatc aaactaatta tggtcgaagt
     9361 ttccaattaa ttccctattt ctagggattc acctccatgt tatatgtgtc actcatgggt
     9421 aacacgcatt caaatttatc actatgactt aaattacaac tacatgttat cgccttccca
     9481 tttagacacc cccagaaaaa aatgttattg cttctatttt atcataatat aaagtgctta
     9541 tgttaacaga ttaaatctat tgcatacatt taattatgat tatctattag ctaaatgtgt
     9601 gaaccttacc ttgttttatt gtagatttta cattcatgtc atcatctaga ataacaaggt
     9661 ctgcatcctt atttacttta atactacctt ttctatcatc gatacctaat gcaatggctt
     9721 gatttaaact tgttacacgc cataaatgat ctaatgtatc acctgtaaat gatattaagt
     9781 tacgtaaccc atgattcatt tttaaaatac taccagcaag cgcaccattt gcaagacgtg
     9841 cttgttgtga ttgaacagtt actttttgtc cacccaaatc atattctcct tcaggcatac
     9901 cttttgcacg cattgcatct gtaattaaat aaaaacgttc attacctttc atacggtaag
     9961 caattgcaac cgatgccgga tgagaatgtg tgccatcaac aatcatttcg gtatgtagag
    10021 catcattcaa ccatgctact ccaaaaacac ctggttctct atgttggaat ggcgtcgctg
    10081 cattatataa atgcgtgaca tgtttagctc ctcgctcaac agcttcaact gcttcttcgt
    10141 atgttgccac tgtatgacca attgaaaaaa taatgtcatc tttatacgtt tcaagcgctt
    10201 cttttgcacc ttcaacttca ggtgcaaacg tcataatctt tattaatccg ttagcagtct
    10261 cttgaaaatg tttaatttta tcgataaatg gacgtacaac gtattgcgga tgttgagcac
    10321 caactttatt ttcagatata aatggccctt ccaaatgtat acctacaatt tccgctgcat
    10381 tgtgaacatc ttgctccgct tcatatttag caatatttat aagtgcatta tctattttat
    10441 cagtagattg cgtcattgta gtggccaagt atgatgtcgt cccttcagac aacaaatttt
    10501 cggatagata ttttaagcca tcgtatgacc catccattgc atcttgacca taaccaccat
    10561 gaatatgtat atcaataaaa cctggtaata catgatgacc tttagcatca atcacttgaa
    10621 ttttatttgt cgtatcatta tcaattgctg ctttatcatt tacttctcca attgcaacaa
    10681 tctgtccatc tttcacatga atgtaaccat tatcgatttt gccatcttca gtataaactt
    10741 tgccgttata tataattaat tctgacacgt ataaaccctt ctttatttat aaattttcac
    10801 tttaagacac tcatatttta ctatatctgc ttcgtttggc ataacttttt gcaaaatatt
    10861 aaaaaagtct atacatttgt ggtgtctatt tcttcattca tttatctaaa aataaaaaca
    10921 ccttcatatc aattcataaa aactgaatta atagaaagtg tttttacagc tttatataaa
    10981 ctaccgttaa cacgataaat aaaactaaca tatattcatt gaacatacaa cttaatatga
    11041 agctctttgc taacaatcat tttaaatcat taaaactatt cgtccattga ttttgaagct
    11101 tcgatttctg tttcagttaa ctttggttta ataagtccat aaattagcgc tgaaactaat
    11161 gtacctacta caagtgcaat aagtgtttgc agtaaatgtg caccatccgt accgacaatt
    11221 acgataatac caccgtgtgg cgcagtaatt cgagaaccta aacctaaagc gattgcgcca
    11281 cctatacctg acccaatcat cattgaaggg ataacacgta atggatcggc agccgcgaat
    11341 gggatcgcac cttctgtaat aaaggacata cccatcacat agttagggat aattgaacca
    11401 cgttgttctt ttgtaaattt acgtctgaaa attaacatcg ctgtcgcaat tgctaacggt
    11461 ggaatcatac caccaatcat tgcagctgta attggtgctg cattaccttc aatcaacgca
    11521 cctgttgcaa aaacatatgc cgctttgttg aatggaccac ccatatcaat cgccatcata
    11581 gcgccaataa ctaaacctaa taatacaata ttagaacctg ataaattgtt taatccatct
    11641 aataacaaat gatttaacca agatgctggt ggattaaaga cataaatcat caataatcct
    11701 gtagctgtca ctgttaatag tgggtaaatt aatgtcggct ttaatccctc taatgcttgt
    11761 ggtaacttac gtgtcatggc tttaacacct tgtgttaagt aacctgctaa gaaacctgca
    11821 ataataccac caataaatcc tgaaccacct gaaattgcta acataccacc tacaagacct
    11881 gacgcgaatc caggtttatc tgcaatacta cgtgcaatga aaccagataa aattgggata
    11941 attaatgcga atgcactttt actaccgata ttccaaagtt gttctgcaaa cgcgttataa
    12001 tctgaacttt tcggatcaaa tgagtttgca ccaaataaaa acacgattgc cattaaaata
    12061 ccaccagata ttacaagtgg tagcatgtta gaaacaccgt tcattaagtg tttatagaat
    12121 gctttacctg ggcttaattt ttcttggttg tcatttgaat gaccttttct gttaccatca
    12181 cgagcaacaa aaggtttacg acttgtatct aatgctttat taattaattc ttctggtcgt
    12241 ttaataccgt ctgcgactgg tacttctacg acatttttac catcaaatcg atccgtctca
    12301 acatgaacat ctgcagcaac aatgatacct gttgcatttt caatatcttg ttcagttaaa
    12361 tggtttttaa taccgcttga accattcgtt tctactttaa ttttaatacc catcttatcc
    12421 gcttgctttt tcaatgcatc acgtgccata tatgtgtgtg caatacctgt tggacaagca
    12481 gttacagcta atacatatgg ctcattagat tgtttagatg attgttctgc agctgcaact
    12541 tgttgtgctt cagcttctgc ctcttcttct tttgtcgctt catcatcagc atgatcaata
    12601 attgctaaca cttcttctgg agacgatgca tgtaataatt tctcacgaac attttcatcc
    12661 attaaaatac cagatagttt agctaaagca tctaaatgtg tttgggcacc accttctgac
    12721 gctgcaatca taaagaataa gtgtgctggt tgcatatcca aactttgata atctacgcct
    12781 gctttagatt taccaaatgc aatagctggt gacttaactg ctgccacttt ggcatgtgga
    12841 atagcaatac cttcaccgat accagttgta ctttgtgatt ctcgattgtg aatcgcttcc
    12901 ttaaatgacg cgacatcact taatttacct gctttgtcta attgatttac taactcatca
    12961 ataacaccat ttttgtcatt tgccattaaa tccattgcta tcgtatcttt tgttaataac
    13021 tctgttactc tcattatttt cactccccat caagtacgct aatcgtaact tgtgatttta
    13081 ttttttctat agcgtcccgt gttgctaagt cctcatcaaa tgccgtggca gtaccgcatg
    13141 caactgcttg ttggaatgct ttttcaatcg ttaaacctga agcaattcca gccaccatgc
    13201 ctgcaactgt actatcacca gagccaactg tattaaccac tttcccttgt ggattaactg
    13261 ctttaatact gatttcttta tcaatataaa tagcaccatc accgccaagt gagacaataa
    13321 cagattgcgc acctttatca actaacaaac gaccatattt aataacatct gcgtctgagt
    13381 tcactgttgt attaaacatc acttctaatt catctttatt aggtttaata aatagtggat
    13441 gatatggtaa aacgctttca gccaattctt tttcagcgtc gactactaat ttagcacctg
    13501 tctgtgctgt aatttgtgca atttgcgcat acgcatcgct tggaatacta cttggtacac
    13561 ttccagcaac aataactata tcttcgcttg ttgtattttt aatttgttgt aacagttgtt
    13621 caaattgtgt tgacgttata tgaggaccag gtgcattgat ttctgtttct tgtcctgttt
    13681 ttaatttcac attaatacgt gtatcttcat caacttcaat aaaattcgat tgaattgcac
    13741 tgttatttaa tgtatctata atgaatttcc caggaaatcc acctgcaaat cccaaggcag
    13801 ttgactcaac atccaatgtc tttaaaacac gtgagacatt aatacctttt cccccagcga
    13861 atttatatgt tgctgttgct ctattcaaac catcaatttt aaaatcattc gtaaaaatga
    13921 catagtcaat tgaaggattg aaagtcactg tataaatcat aaagtccctc ctataaagtg
    13981 atacttttgt tggtattctt ttaacgattc ttgatttaat gctttttcag atgtgatgac
    14041 ggtcgtactt tctagcaaag gtacacgagc aaaatatact ttattaaact tagaatgatc
    14101 tataagtaca aatgattgat tggctaatga cattgctgtt tgtttaacta atgcctcttg
    14161 ctcatcggga gtagttaatc caagttcaat atctaatcca ttcatcccga taaaagcttt
    14221 atcgaaacaa tatcgtctta atatctccat ggcacttgaa ccaatcgtag caagtgtatt
    14281 ttctttaact tgaccaccta gcataattgt tttaatacct tttttaagta aagcttctac
    14341 atgtgttaaa ccattggtta ccacaatgat atctttcgct tgaatatatt taattagctc
    14401 caatgtagat gaaccagcat cgataaataa gcattcatta tcgttgattt gattagctgc
    14461 tattttagca atcattttct tttcatcgag attagttgct aatttttcag ttaaattcgc
    14521 ctcaaccata cgattttctt ttaacattgc accaccatgc acacgttgca atttccctaa
    14581 ttgttgtagt ttagataaat ctcttcgtat tgttgaagca ctgcagccag ttcgatctat
    14641 taattcttgt aaagtcaaaa aatctttgtg cgaaagttct tctaatatta actcgtgtct
    14701 tttttctgta attatcatca tcaccccatc tcactctgta ttataatgag tacgctttca
    14761 cttttcaatc ataaattacc aaaaacaatc aaaaacaacc aaattgtgac gataaaatta
    14821 catttttata ttcaaatact catttgtaat gactgtttat gatcgtaata tgctaattca
    14881 atcaaaaagg agtgtggcag aaatgaattt tataaaaatt tcatctctgt cacactccta
    14941 atcttgcccc atactttttg ttgttattaa tcattcatgg ataacttctc caattttgcc
    15001 tttagttatt gcaatcaaat cctcaacagc tattgtgatt tgcattgttc gaagcccacc
    15061 actcacactg atatgactat aattttcaca ggatttgtca acgactgttg gaaacaatgt
    15121 tttcatacca acaggcgaac acccaccacg aatgtatccc gttacatttt tcaaattatc
    15181 taaaggcata agctgcaatt tcttctctcc aaccaaagca gctgcctttt tcatatctaa
    15241 agtttcactt actgggataa caaatacaaa atgttcatgt tttgtatttt ctagaacaag
    15301 cgttttaaat actgttttaa catttgcttg tatgagttct gcgacttcta cacccgataa
    15361 atgttcttct ggtacctcaa agctatgaac atcgtattta atttttgcac gatcaagcat
    15421 acgcatcgcg ttcgttttct tatttttagc catttcaaca cctcatttat acttcttcag
    15481 aactatatta acattttaaa atacattacg gattggttga ttttgacata acatttacat
    15541 catttaataa gttgagttca ccttttcaaa ttaaattatt gcaaaataaa aacagtatat
    15601 ccaattagaa tacactgttc catctattat ttcgttatta tgccttgatt tgaaatactt
    15661 acatgttgct tactagttga attatcattg gaatacacat aattatatcc atgatttgtc
    15721 ttagaaattc tttctaaacc ataattatca ttgatatgct tatctgcata acgatcagca
    15781 ataacttggc actcttgttc gttaaaagaa tttgatttat ttgcattcac acgatgctta
    15841 aaatgatttt gctttttcac attttcattc acttcagatg ctttagcagt atgaatattg
    15901 agaatatcca ttttcttttt ataagtatct tcagttgata catttatcgc gttaagtgta
    15961 ttaatcgttt tatgtacctt agcaagcgca tcttcatttg ttgctaatat taataaacca
    16021 attaaacaaa cggttaatat tacagcaaca aagcctaaaa ataaattttt tactgtcatc
    16081 cccttaccca catttcctta ctcatttttt atcatcttaa cacattaatg ttaatgaatt
    16141 aggtatgtgg attgcaattt aaaaagaatg taatatttgt aacatgttta ttactcaaaa
    16201 tcattttttg ttacatataa catttaaata taaagactaa aacatttaaa agtttttaat
    16261 ctttataaat gtaaagcatc gacttttctt cactataatt gtaagaaaat cgatgcttat
    16321 tttgaaatgc tttagttgtc gaaatacatt aatcgaatga caaccatgtg cgatattaca
    16381 aatcttgttg ttttaactta gctctatgtt gcttttcaat taaaacaata acaacacctg
    16441 ctaatgacac acctatagcc atataaattg gtgcttcaat gtgtacatca aataacgcac
    16501 ctgcgattaa aggacctatg aaattaccca tactagtgaa tgtcgagttt aacccacctg
    16561 caaatccctg tctatcacca gcaatatttg agaaataatt tgtaatagca ggtcttatca
    16621 tatcgaaccc gataaagaca acaaagctaa ttaccataat tgtccagtaa ccatcggcaa
    16681 taactaatag cactaataca ataactgaat atattaatga ccatgcaata aatgttaact
    16741 cagagaagta tttcataaat ttatcaaaga aataaatttg gaaaagtgca ccaaagatac
    16801 cgccacctgt aattgcaatc gaaatatctt taggtgaata atttacttta tacgatgtat
    16861 ataaagaata cagtgtttca aatgccgata aaccgaacgc taagacgagc gttaaaattg
    16921 ctggcgtaat aaagactttc caatcaattt tcgttaacaa ttggggctca agtttttgga
    16981 aaccacttgt cgtagacttt ttcggatcat gaatcaatac aactgacatt atgaaagcta
    17041 aaatgcctaa tgcacctgca aaataaaatg gcatacgatg tgaaacttct gccataaatc
    17101 caccaatccc tggtcctaaa atgaatccag aattgataat cgctgacatg tagccaaagt
    17161 tttttgcttt ttgatggctt ggtgaaacat ctgcaatcaa acctgtcaca ccaggcatta
    17221 ccataccagc actcatacca ccaatcactc tcgataacat caataccgaa aaattgtggc
    17281 caactgcaaa cataaattct gacactgaga ataaaattaa ccctatacat ataattaatt
    17341 tcttccctaa tttgtcagct agcgtaccac caaacggcga tataatcatt tgagataacg
    17401 caaaagcagc aactagtaat cctaaatcac taccagttaa tcccaaatct tttaaataaa
    17461 caggcaagac tggtattact aaaccgatac ctaaaaaaat caagaaaata ttaaaatata
    17521 agacaaaaat ctgtttattc atatgctcac ctcttttttc tccatgtcat gcttaaagct
    17581 gttattcttc ttttccacga cagattgcaa ttcatgctaa atattcgtaa aaagtttcta
    17641 tattgtatta caacattgct acatttgaca atattttttc tttgtaatta tcactatttt
    17701 ccatttaatt gtataattaa tgacatatta aaataaaggg gattgatcat atgaaattgc
    17761 aaaaaagtaa tcatactata ctactagtgt tagaaaaagg cgaagatatc gttgaatgta
    17821 taacaaactt tgcagatgac caagacttaa catttacatc tgtcagcggc attggtgcgt
    17881 gtgatgacgt cgttttaaaa tttttcaatt taacaacgaa acaatacgaa gaaaaacata
    17941 ttactgagcc actggaattg acgagcttat taggtaatat ttctcgtcta gaaaatggtc
    18001 attttgcaca tttgcatgct actttcggta ctcaatcata tgaaactttt agcggacatc
    18061 tcgctaaagc aattgtttct gcaactgctg aaatcattct tactgtaact gatttggaca
    18121 ttcaacgttc attcaaagat gcagtcggtt taaatttact tgatcctcaa tagcacttta
    18181 ctttttagtt gaatcaaatt ttattacaag ttatcataag tgcttaatca taaatgcatt
    18241 ctcgtttatt aatatacttc aacgagttaa attaaatttt taattaggaa ttgaatgcgt
    18301 ttataactat cacatttgaa tgaataactt tttcattaga aagtagtgtt tattattgat
    18361 gcaatctcga tacatcgcta gaatttactt tttaatttta tttatcgtct ccctttttga
    18421 gactaaaatt tttcaattta tgactttaaa tttgttttta gcatatatac cttttgagct
    18481 tagtctatta ttacgattat tcaaaccgaa taaaaagtat gaatggccac tatttatcat
    18541 atatagtttt atatttgtgt tacttttacc aaatacattt tatatggtaa ctgatttaat
    18601 ccatttgaac caatttcaat tcaactttta cgcaggacta aatttaagtg agtggaaata
    18661 ctttacctat ttactgcttg gtgtcttctt agcggtttat gtgatgattt taatctattt
    18721 tgaaatacta acattgactt ctcaccgttg gcttaataga ttaattgttg tcgtgctaat
    18781 gtttttaaat ggattcggaa tttatattgg tcgtttctta cgcttacatt ccgtttattt
    18841 ctttaatgag cccttacatg ttctaaatca cattctagaa agtctaacgc ttaaaactgc
    18901 tatgtttgta tgttttatgg ttgtcatgca agcagcaatt ctattatttg gaaaaggagt
    18961 gcgtttgaac aagtgacaat aaatataatc gttttaatag tatctatcat tgtctttcaa
    19021 ttgattattg gacacatatg gcatgatatt ggtttaagtt atttaagaag tatcttactc
    19081 atgatgctgc catttggact aggtgtattt atacaacaag tgtcgtatta cgaacgacaa
    19141 tatcctaaat ggcaagtgcc tcaaaacata aaagttagat tgaaatatat ttatctcgct
    19201 acgtttttag agtatgtcgt actatacctc actttattta cagacatact aagataacat
    19261 caaattaata agaaaactaa atacaactta tatatttgag gaaagccaat ttctatcaca
    19321 tcaataatag aaattggctt atttatattg cttaagaact ttatattctg ctccagattt
    19381 tactcatgcc agatctatca attgagccga attagtctag cgctttaaat gtagctaaaa
    19441 cttgtgtacg tttttcttga tgatctacca tttgtcttgg ataatgacta cctaattcaa
    19501 tcccctgttc aaaaaggttg gactcattgc gttgtgtatc atgcaaatat tttgcatcaa
    19561 tttgattaaa aatcggaaga tatgttttga tatacaaagc tttagcatca aagcgttcac
    19621 tctgtcttat tggattaaac attctaaaat acggcactgc atccgtacct gtagaagcag
    19681 accattgcca tccatgaata tttgatgctg catcatagtc aataaggtgc tttctaaaga
    19741 atttttctcc ccatgtccaa tctataaata aatctttggt taaaaattgc gacacaacca
    19801 ttctcattcg attatgcata aaaccagttt gtgtcaattc cattattgct gcatcaatga
    19861 ttggaaatcc tgtttgccct tcgcaccatg cattaaaatt cgcttcattt tgcgaccatt
    19921 ttatctgtcg atatttaggt ttgaaagctt ggtatgaggt ttcaggatac tgtgtcatta
    19981 acacataata aaattctcta aaaatgagtt cacgtataaa tgcttcatag tttgcctcat
    20041 cttcatcata acgcgccaat aaatcattaa aaatttcaat aatatctaat aatccatatg
    20101 ctaaagcaac acttagctga cttgttaaca cttcaggtaa atagtctctt ccgctttcgt
    20161 aattctgtat atcttgatct aaaaaatgtt gccatttatt ctgttcaatt atttgtgagg
    20221 atccaaatgt tatgtcatca aacactaaat catcaggtga tgcaatgacg aagtcttcga
    20281 atgattttaa atcatagtga tatacgtctc tatgcctcaa gtaaggtcgc cattttttat
    20341 agaaactagt aaaaactttg tatggctccc cttgttgatt cattgtttta ctcgctttaa
    20401 agtaatgatt cccacgtatt aaagtaacgg caatacgtgc ttcattgaat aaagaacgtt
    20461 gatgtaaaat atcatattct tcaagatgat aactcataat atcacccgca atcactactt
    20521 cagatatatt gttttcttta caaaatgaaa tgatatcgtc ataagacatg acataaggtg
    20581 tgagcttttc tgcgtgcaac gattggtaaa agcgctgcaa agtaccgcga taaaactgtg
    20641 ctttcaaatc agaagctgaa gacatgtcct cttccggaat gataaaataa catgcatcaa
    20701 tgtcttcttt ttgttgataa atatattcaa ataatggatt gtgttccatt cgaaacattc
    20761 gatttaataa cacagcaatt gccataaaca aaacaccctt caattatctt tttattttat
    20821 taagcttttt gtcactttaa aataacctag attcttaatt atatttttaa ttaaagcaaa
    20881 cctaaccatt tccaataagt catactaaaa actatcacta gaatataccc tacaattgtc
    20941 aatggtatac ctgccttcaa gaaatcttta accgtaaaag taccagtgcc ataagccaac
    21001 atattttgag gtgcactaac cggtaataag aacccaaagc taataacaaa ttgttgaatt
    21061 aaaacaaatc ctatagactg gtctcctaag tgtaacgtag aggttagcga aataaaaaca
    21121 ggtattaagg ctgatgataa acttgttgca ctcgcaaagc ccaaatgaat caatatatta
    21181 aaaagcgtga taagtgcaat tgtcgcgata ataggtaaat gttttaaacc taaaacacca
    21241 aaagtttgat cacttaacca ttgagctgca cctgttttca aaagaacgtt acctaatgaa
    21301 atacctacac caaacacgat aattgttccc catggtattt tattttcaac atgtttccat
    21361 gtcatgacac caattttcgg cattaacata acacctaaag caataatagt aatggatgca
    21421 gagtcaatcg gatgtaatac tttttcagtt gaccaaaaca gtaataataa catggatata
    21481 acaattaaac gccattcacg tgcgctaacg gggccaagtt tatgcaattc ttcttttatt
    21541 aaatctttgc caccttctat tgtattgatt tctggaggca tcactttaat catgatgaaa
    21601 tataaagcta tggacataac tatggaccaa ggcgctgcat ataagaacca ctcgccccat
    21661 gaaacatcaa atcctaattg atggtttata aaattaatcg ctacgatatt ttgtgctgcc
    21721 gccgttttga taccaatatt ccaaattgac acagcttgta ctgaggtaat tattaataaa
    21781 gacgctaact tgctatcttt ggaaacttta aatgccgcaa tcatacccag caagattggt
    21841 acaactgccc ctgctctagc tgttgcagaa ggaacgaaaa atgcaagtac aattgaaaca
    21901 ataattgctc caataactat atttctagtt ttattaccaa caattgataa cactaaaaga
    21961 gctagtcttt tatgcaaatt cgtttcttgc atagcagcag ccaaaaataa tgcggctgca
    22021 acgagagcta cagctgaagt tgcaaatcca ctaaacgcta atgttaatgc atgattagtt
    22081 cctagaaggt cacttccagc taaaacagca ctgccacttt tcggattacc tagcttctcc
    22141 cctaaatttt gaaccgggct aaatcctaaa agtaatatca ttaagccaat aattaaagtt
    22201 gctgacaccg gatatgatac agcttccgtt acccacataa taactgcaaa agctaaaata
    22261 gctagtactg ccttagccat tattggcaga cttgaaggtg ccgggagtaa tagtacaact
    22321 ataagtatta taaaactcat gacaatccaa aatggcttgt attgcttttt tgtcttttct
    22381 ttcttttgtt gttcatgttc cactacatgt ttttcttctg acataacagt cacccctttg
    22441 tttaatctta atttaattat aacaattttt taaaacatac atttttaatt tatgcaaaat
    22501 acacaatttt atcgaaatat tttgtaaata atattgctag gtgatgagtt atctcggtta
    22561 attacaaaac gatatctaag tttaaatatt agatcataaa aaaactatct actgaatatc
    22621 ctcatagcat catttttcta agcaaaagtt aaacttagtt agataaaatg caaatgagat
    22681 tattgtagat agtctctttt taatatttaa aaatgattaa tgccataaac ataaataatt
    22741 ccaaagaatg ccgcgccact aagcactgtt aatataagac ttagtaacaa tgtgcgttta
    22801 taatgtttaa taaatgctat gaacaaaatg actacattat acgcaaagaa aagtccgaat
    22861 aatgtcattg ttattttcaa atcagaatag aaaatattta atagtaatac aatgactgca
    22921 taaattaaat acggaataac tataaatttg cgttcaaatc ttaattgttc gaaacgttta
    22981 tcttcgtttg tcatgatatg ctcctttatg atttaaaagt aaataagttt acggaatatc
    23041 ttgtccgata atagcggtgt aaatgtcaaa ccacgactga tcatctaaat taagttgtag
    23101 cccttcgatt gcttgatcaa tacgctttaa ctgacttgtt ccaagtatcg gcatgatacg
    23161 atgcggtatt tttactaacc atgctatcat cacagctgtg tcactcacac catatttgtc
    23221 agctattgat tgaacaactt tcataatacg ttgcgcttta atatcttcct tgtcgaaaat
    23281 tttaccgcct gcaaaaggac tccaagccat aatttgaaca tggttttgat acattgaatc
    23341 cattgttcca tcttgtaaac tatcaacgtg atatggcgat aattctaatt gattgatgct
    23401 aatatgtagt ctttctttca taatatattg atttaacaat tggtattgtg aatgattaaa
    23461 attcgacacc ccgaatgact tcaacttacc ttgtttaaca agtttagtta atgcatcagc
    23521 aacttgttct ggatccatca atggtgaagg acgatgaatg agtagactat ctaaataatc
    23581 tacattcaaa ttgattaatg actgttcaac agatttcacg atgtgcttac tactcaaatc
    23641 ataacgatgt ccatttgtaa aatcaaattg cttagaaggc aaaatgatac cacatttcgt
    23701 aacaatttga attttatttc ttaattcggg tgataaatcc aaagcattac caaacagtga
    23761 ttcacattga taatccccat aaatatcagc atgatccatc gtggtaatcc cacgttcaac
    23821 taattcattt ataaaataat ttaactcttt cgcagtcatc ttccattcat ttgcacgcca
    23881 aaaaccttgt acaagcctag aaaaatgaac atagtgatta atcattattt gttccatatc
    23941 tcatccactc catccctcaa tgtcacaaaa tattcacaat aaaagtatta agaaattaat
    24001 gtgctatttc cgttaaattg aaacaacaca ttttctgatt tacgtaaatt gtagcatatc
    24061 caattgatta cgtatgtgat ttgtatctaa agtttcacca ataataacaa tcgttaatgg
    24121 taagtgcatg ccaattattc catagtctgg taaaccatat gcatattgaa attcataaat
    24181 tgcatttggt tgatctctaa atgatacata acctttcaaa cgtagaacag attccggtaa
    24241 tttcattata aattgataaa acaattgacg atcaatcgga cctgtaaatg tgtaagtcat
    24301 acttttaatc ccatgatgat ggtgatgatg agacgatatc tctctgtctt taccaggtaa
    24361 gtccaattct tccaacgaaa cttgtccata ggttgtttta taagttggaa tacttgcaca
    24421 aattatactt aattgcttat caattttttc aagactgtca tcagttacaa gatcaatttt
    24481 attaataata atcatgtcac ttagtttcaa ctgatcttcc atcagcgaaa ctgtattttc
    24541 ggtatattga tgacgttcca aaaatcgagt cgcatctaat acaccataaa taattggttt
    24601 ttcaaagaaa ttaacgattt gcggatcttg acatgcaact agtaattcca aagaatgcgc
    24661 aatgcctgtc gcttctatga tgacatgatt aacgtcccct tttaaagcaa tggcttttag
    24721 ttcatagaca agttcttgtt taagatcgca acaaacacaa ccattaatca atgaatggac
    24781 ttcaatttca tttgaaatac tattgctatc aatatcaaaa gtaccgaatt cattcatgat
    24841 gattttaatt ttctcatcat tttttaataa ttcactaata taatgtgtca gtaacgtggt
    24901 tttaccacta cccaaaaatc cgttaattat ggatattctt attttttcat ctttattatt
    24961 tttcatttta tattctcttt tctattacag ttatt
//
LOCUS       DAKPJH010000029        24911 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.029, whole genome shotgun sequence.
ACCESSION   DAKPJH010000029 DAKPJH010000000
VERSION     DAKPJH010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24911
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.029"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(3..635)
                     /locus_tag="OY092_001008"
     CDS             complement(3..635)
                     /locus_tag="OY092_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HCX1075963.1"
                     /translation="MLCEVIAIYKNPKYRIIKYNDEYLMVNIINNWLVLFIPLLNWLT
                     PKRYIKISQEELESLNTFKPAKNNAFWPALGSSVLFSVTFRKYMPLFNVRLEKTIVIA
                     IFFVVFLGILFFYLNLNRRLALSVFTMNKEKSQKMILLPNLKHFFFIIFAYLYFGGFS
                     FFTLYALITIDVQNIIIFICWGAVTMFFFFINIVPIGIKKAHVILLKKAE"
     gene            complement(775..1395)
                     /locus_tag="OY092_001009"
     CDS             complement(775..1395)
                     /locus_tag="OY092_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 domain-containing protein"
                     /protein_id="HCX1075964.1"
                     /translation="MLCESKIINKNPKYRIIKYNDEYLMIDIISTWISLFFPFINWFI
                     TKRYVKISREEFENLNIVKPAKKNVFWPVAGSSALLGVALRKYTHLLDVQLDKKLVIA
                     ICCITFIGILIFYVRLIKKSSLNIYNTKNKRSKIFLIPTLKNVCFTLFGYILFGGLTM
                     LFLDALLSMSYQNIIVYFAWITAIMGFFLVNIALIIDKNIHVILKN"
     gene            complement(1442..2077)
                     /locus_tag="OY092_001010"
     CDS             complement(1442..2077)
                     /locus_tag="OY092_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 domain-containing protein"
                     /protein_id="HCX1075965.1"
                     /translation="MLLCESKVINKNPKYRIIKYESEYLMIDLASNWIVFFFPFINWL
                     IPKTYVKITKNDYEKLNIVKPVKNKSIGWTIFAGIVLLGGTVRRNTYLFDFQLEKLIV
                     WSSCFISFLGVIFFYCYLNKKLTLNVYKENKNNELKLRLLPSFKNMCFTIFYYLFTGF
                     MSYGAFYLLVFENVQNLILYISWLFMTMLFMLMNMHSIIDKKVHIFLKSNK"
     gene            complement(2078..3472)
                     /locus_tag="OY092_001011"
     CDS             complement(2078..3472)
                     /locus_tag="OY092_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1075966.1"
                     /translation="MSIDMYLDRSRNQASSVGNLSQTMNSNYDALEKAITQFINDDAL
                     KGKAYTSAKQFFSTVLIPLSTSMKTLSDLTKQACDNFVSRYTSEVDSISLKESELEED
                     IRSLSQQITRYENLTNNLKKHASDNQQAISSNQQIIQTLGQQKHELEEKLRKLREFNQ
                     KSPEIFKEVEEFQKIVQQGLTQAQNFWNFSTNQFNIPSGKELDWAKASHEKYLKVAMG
                     KIEHKAEKETLNKADFAVIKAYAKEHPEDDIPKSIMKYINDNKDSIKRDIGLDITSTL
                     LEQGGINASKFGVFINTAGGVKGPAGPNSFVEVKRTSGNVFIENGSKFAKGGKYLGKG
                     VAGVGFGIGMYDDLANDDKTFGEALSHNGMTLAAGSVAAFGVAALVSNPVGWAVVGIL
                     TAGIIGSIVSDYLYQNNYFGIKDKVDWAGHKIDEGIDAVNKTAEKAVDSVGNTIGDAT
                     KSISNHINPMKWSW"
     gene            complement(3937..4038)
                     /locus_tag="OY092_001012"
     CDS             complement(3937..4038)
                     /locus_tag="OY092_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075967.1"
                     /translation="MCQYLCLKSVELGVVIVMIYCLKVVALTVRLHN"
     gene            4096..4536
                     /locus_tag="OY092_001013"
     CDS             4096..4536
                     /locus_tag="OY092_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006189740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HCX1075968.1"
                     /translation="MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTT
                     QLVDLKMINTIRGKDGGYLANDQSADVSLATLYKHFVLEKKHHTRLFTGDEGSHCQIA
                     RNIATTMSHYQQDEQNIIINFYNGKTIKDVIEDIQKEDLCHENI"
     gene            4523..5845
                     /locus_tag="OY092_001014"
     CDS             4523..5845
                     /locus_tag="OY092_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HCX1075969.1"
                     /translation="MKTYDLIVIGFGKAGKTLAKYAASTGQHVAVIEQSSKMYGGTCI
                     NIGCIPSKTLVHDGLEGKSFEASYNRKNDVVNALNNKNYHLLADDNNIDVLDFKAQFK
                     SNTEVNLLDQHGDIADSITAPHIIINTGATSVIPNIKDLDQAKHVFDSTGLLNINYQP
                     KHLVIVGGGYIALEFASMFANLGSKVTVLERGESFMPREDQDVVAHAITDLENKGIAL
                     HTNVETTELSSDDHHTTVRTNVGNFEADAVLLAIGRKPNTDLALENTDIELGDRGEIK
                     VNAHLQTTVPHIYAAGDVKGGLQFTYISLDDYRIIKSALYGNQSRTTDNRGSVPYTVF
                     IDPPLSRVGLTSKEAAAQHYDYTEHQLLVSAIPRHKINNDPRGLFKVVINNENNMILG
                     ATLYGKQSEELINIIKLAIDQNIPYTVLRDNIYTHPTMAESFNDLFNF"
     gene            complement(5897..6238)
                     /locus_tag="OY092_001015"
     CDS             complement(5897..6238)
                     /locus_tag="OY092_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1450 domain-containing protein"
                     /protein_id="HCX1075970.1"
                     /translation="MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGR
                     RKTFTFVNNRPLAALTEEELIEKVSQQLKKPRDSEEEERLRKRHEERKRRKEEQDRKL
                     KEKLEKRKAQQ"
     gene            complement(6415..7491)
                     /locus_tag="OY092_001016"
     CDS             complement(6415..7491)
                     /locus_tag="OY092_001016"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HCX1075971.1"
                     /translation="MIQVKAPGKLYIAGEYAVTEPGYKSVLIALDRFVTATIEEADQY
                     KGTIHSKALHHNPVTFSRDEDSIVISDPHAAKQLNYVVTAIEIFEQYAKSCDIAMKHF
                     HLTIDSNLDDSNGHKYGLGSSAAVLVSVIKVLNEFYDMKLSNLYIYKLAVIANMKLQS
                     LSSCGDIAVSVYSGWLAYSTFDHEWVKHQIEDTTVEEVLIKNWPGLHIEPLQAPENME
                     VLIGWTGSPASSPHFVSEVKRLKSDPSFYGDFLEDSHRCVEKLIHAFKTNNIKGVQKM
                     VRQNRTIIQRMDKEATVDIETEKLKYLCDIAEKYHGASKTSGAGGGDCGITIINKDVD
                     KEKIYDEWTKHGIKPLKFNIYHGQ"
     gene            complement(7504..8487)
                     /gene="mvaD"
                     /locus_tag="OY092_001017"
     CDS             complement(7504..8487)
                     /gene="mvaD"
                     /locus_tag="OY092_001017"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HCX1075972.1"
                     /translation="MIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTE
                     TKVTFNDQLTQDQFWLNGEKVSGKELEKISKYMDIVRNRAGIDWYAEIESDNFVPTAA
                     GLASSASAYAALAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYSDE
                     TSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLA
                     EAKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECREAGY
                     PCYFTMDAGPNVKILVEKKNKQQIIDKLLTQFDNNQIIDSDIIATGIEIIE"
     gene            complement(8492..9412)
                     /gene="mvk"
                     /locus_tag="OY092_001018"
     CDS             complement(8492..9412)
                     /gene="mvk"
                     /locus_tag="OY092_001018"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HCX1075973.1"
                     /translation="MTRKGYGESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEAL
                     ESGNYSSIKSDVYDGMLYDAPDHLKSLVNRFVELNNITEPLAVTIQTNLPPSRGLGSS
                     AAVAVAFVRASYDFLGKSLTKEELIEKANWAEQIAHGKPSGIDTQTIVSGKPVWFQKG
                     HAETLKTLSLDGYMVVIDTGVKGSTRQAVEDVHKLCEDPQYMSHVKHIGKLVLRASDV
                     IEHHNFEALADIFNECHADLKALTVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLL
                     LAKDLPTAKNIVKAVEKAGAAHTWIENLGG"
     gene            complement(9999..10835)
                     /locus_tag="OY092_001019"
     CDS             complement(9999..10835)
                     /locus_tag="OY092_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HCX1075974.1"
                     /translation="MDLASKYFNGVNWRYIDHSSGLEPMQSFAFDDTFCESVGKDISD
                     NVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAIVRNSGGLGVVLDQGVLNI
                     SLMFKGQTETTIDEAFTVMYLLISKMFEDENVDIDTMEIEHSYCPGKFDLSIDGKKFA
                     GISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEVTKFKYPEIEPSCMASL
                     ETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTYFDKMIERNKKMIDQ
                     MQ"
     gene            complement(10838..11824)
                     /gene="pta"
                     /locus_tag="OY092_001020"
     CDS             complement(10838..11824)
                     /gene="pta"
                     /locus_tag="OY092_001020"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCX1075975.1"
                     /translation="MADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQATDYVTP
                     IVLGDETKVQSLAQKLNLDISNIELINPATSEFKAELVQSFVERRKGKATEEQAQELL
                     NNVNYFGTMLVYAGKADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKGDE
                     QYIFGDCAINPELDSQGLAEIAVESAKSALSFGMDPKVAMLSFSTKGSAKSDDVTKVQ
                     EAVKLAQQKAEEEKLEAIIDGEFQFDAAIVPGVAEKKAPGAKLQGDANVFVFPSLEAG
                     NIGYKIAQRLGGYDAVGPVLQGLNSPVNDLSRGCSIEDVYNLSIITAAQALQ"
     gene            11992..12744
                     /locus_tag="OY092_001021"
     CDS             11992..12744
                     /locus_tag="OY092_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HCX1075976.1"
                     /translation="MSQAAETLDGWYSLHLFYAVDWASLRLVPKNERDALVTEFQSFL
                     ENTATVRSSKSGDQAIYNITGQKADLLLWFLRPEMKSLNHIENEFNKLRIADFLIPTY
                     SYVSVIELSNYLAGKSDEDPYENPHIKARLYPELPHSDYICFYPMNKRRNETYNWYML
                     TMEERQKLMYDHGMIGRKYAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMR
                     FDETTARYGEFGSFFVGHIINTNEFDQFFAVS"
     gene            13292..14056
                     /locus_tag="OY092_001022"
     CDS             13292..14056
                     /locus_tag="OY092_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HCX1075977.1"
                     /translation="MDINSEEYKQEVLIKDVVMLAARILLESGAEGTRVEDTMTRIAK
                     KLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNNEISL
                     AEAKTQLEKIYVAKRDSSLPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYLVT
                     EILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAI
                     QDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLILV"
     gene            14069..14521
                     /locus_tag="OY092_001023"
     CDS             14069..14521
                     /locus_tag="OY092_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HCX1075978.1"
                     /translation="MFWILNFIFSFLASMFFCVIFDAPRKLYLSCGFVGTCGWMVYTL
                     FFNGFNVHTIYSSFFGSLALGLLSHYMARKQKEPAIIFMVTGIIPLVPGGLAYDATKN
                     LVLLNFSTAINTMLEVTLIAGAIALGLLFADQISKLIVSGFVKSFKRL"
     gene            complement(14662..16146)
                     /locus_tag="OY092_001024"
     CDS             complement(14662..16146)
                     /locus_tag="OY092_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HCX1075979.1"
                     /translation="MEKKNKQIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIK
                     QSGPIAASIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSFLSFGRYVSFFSSWFL
                     TFGYVCVVALNATAFSLLVKFLLPDVLNNGKLYTIAGWDVYITEIIIATVLLLVFMLV
                     TIRGASVSGSLQYYFCVAMVIVVLLMFFGSFFGNNFALENLQPLAEPSKGWLVSIVVI
                     VSVAPWAYVGFDNIPQTAEEFNFAPNKTFKLIVYSLLAASLTYVVMILYTGWLSTSHQ
                     SLNGQLWLTGAVTQTAFGYIGLGVLAIAIMMGIFTGLNGFLMSSSRLLFSMGRSGIMP
                     TMFSKLHSKYKTPYVAIIFLVGVSLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAA
                     KLFSYNKQSNTYAPVYKTFAIIGSFVSFIFLALLLVPGSPAALTAPSYIALLGWLIIG
                     LIFFVIRYPKLKNMDNDELSRLILNRSENEVDDMIEEPEKEKTK"
     gene            complement(16267..16635)
                     /locus_tag="OY092_001025"
     CDS             complement(16267..16635)
                     /locus_tag="OY092_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HCX1075980.1"
                     /translation="MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTY
                     QMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIG
                     GVLFIIGWIMLIIATFKFAG"
     gene            complement(16768..17148)
                     /locus_tag="OY092_001026"
     CDS             complement(16768..17148)
                     /locus_tag="OY092_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HCX1075981.1"
                     /translation="MVNRETLIARIEQELVQAEQAQHDHDFEKHMYAIHILTSLYAST
                     SNTPHIGEQQMNRRIANHNQMPQSQITQPTHQVTAAEIEAMGGKVNTHSAHHHNKSYS
                     QPSNQQQRLATDDDIGNGESIFDF"
     gene            complement(17149..17805)
                     /locus_tag="OY092_001027"
     CDS             complement(17149..17805)
                     /locus_tag="OY092_001027"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HCX1075982.1"
                     /translation="MEWSQIFHDITTKHDFKVMHDFLEKEYSTAIVYPDRENIYQAFD
                     LTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTP
                     HLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKP
                     AQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
                     "
     gene            17989..18819
                     /gene="thiD"
                     /locus_tag="OY092_001028"
     CDS             17989..18819
                     /gene="thiD"
                     /locus_tag="OY092_001028"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001185456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HCX1075983.1"
                     /translation="MALKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTM
                     DKDTWSHDVTPLPMDVFEKQLETALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYF
                     VVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKK
                     AATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAA
                     ATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIEHIDVEVTEV
                     "
     gene            19326..19493
                     /locus_tag="OY092_001029"
     CDS             19326..19493
                     /locus_tag="OY092_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraX"
                     /protein_id="HCX1075984.1"
                     /translation="MIIYRQYHHEGAPVYEIITKTFQHVSIKCDDSFSDTEIFKLLSL
                     LQDDIDHMKVS"
     gene            complement(19694..19963)
                     /locus_tag="OY092_001030"
     CDS             complement(19694..19963)
                     /locus_tag="OY092_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075985.1"
                     /translation="MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETN
                     QCQINYVKPILINENIEFIEQHEQEIIAINDDGEIKIKISLSTKK"
     gene            complement(19966..20331)
                     /locus_tag="OY092_001031"
     CDS             complement(19966..20331)
                     /locus_tag="OY092_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraC"
                     /protein_id="HCX1075986.1"
                     /translation="MQHYSLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASL
                     WSKFDLFKKYANSELILTKSAINQTQKIEVDTIYVGRLEDIECRQIRNITRYTMALTL
                     TKNDQHVITVTQTFIKAMK"
     gene            complement(20306..21445)
                     /locus_tag="OY092_001032"
     CDS             complement(20306..21445)
                     /locus_tag="OY092_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HCX1075987.1"
                     /translation="MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEV
                     ISKIDDVVLGNVVGNGGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQA
                     GAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVA
                     KMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDN
                     FGRFKPVIKGGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSN
                     FPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGAL
                     ASGHPYGASGAQLVTRLFYMFDKETMIASMGIGGGLGNAALFTRF"
     gene            complement(21447..22823)
                     /locus_tag="OY092_001033"
     CDS             complement(21447..22823)
                     /locus_tag="OY092_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HCX1075988.1"
                     /translation="MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESL
                     QKYSLNPVVAINMKSPVQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVI
                     GDTGLMQSIDSPMFIDSTQLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEM
                     LMLKNENAIAAPGPLSHSLTLYALLFALSSGRTFIGQTTFHPEKLLNQCRKISSYKVA
                     MFLVPTMIKSLLLVYNNEHTIQSFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETS
                     FISYNLNQQAPVESVGVLFPNVELKTTDHDHNGIGTICIKSNMMFSGYVSEQCINNDE
                     WFVTNDNGYVKEQYLYLTGRQQDMLIIGGQNIYPAHVERLLTQSSSIDEAIIIGIPNE
                     RFGQIGVLLYSSDVTLTHKNVKQFLKKKVKRYEIPSMIHHVEKMYYTASGKIAREKMI
                     SMYLRGEL"
     gene            complement(23367..24767)
                     /locus_tag="OY092_001034"
     CDS             complement(23367..24767)
                     /locus_tag="OY092_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1075989.1"
                     /translation="MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYI
                     GANFFSPVENADIRQMLTFAALAIAFLLRPIGGVVFGIIGDKYGRKVVLTSTIILMAF
                     STLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKLRNSLGS
                     GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEES
                     PVFENDVATQPERDNINFLQIIRFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVI
                     KLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGGLTLFSIIAFMLLHS
                     QSFVVIVIGIFILGFFLSTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPL
                     VATWLVTKTGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYY
                     AEHPKEALWWVKERKN"
BASE COUNT         8111 a         4563 c         3616 g         8621 t
ORIGIN      
        1 tattattcag cttttttaag aagtattaca tgagcttttt taatgccaat gggaacaatg
       61 tttataaaaa agaaaaacat agttactgca ccccaacaga taaatataat tatattttga
      121 acatctatag ttatcagggc atataaagtg aaaaatgaaa aaccaccgaa atataaatat
      181 gcaaatatta taaagaaaaa atgttttaaa ttaggtagca atatcatttt ctgacttttt
      241 tctttattca tagtaaaaac acttaatgct agcctacgat ttaaatttag gtagaaaaat
      301 aaaataccaa gaaatacaac aaaaaatatg gctattacta ttgttttttc caatctaaca
      361 ttaaataaag gcatatactt tctaaaagtc acactaaata aaactgaact acctaatgct
      421 ggccaaaatg cattgttttt agcaggtttg aaagtattta aactttctaa ttcttcttga
      481 ctgatcttga tgtatctttt tggtgtcaac caattaagca atggaatgaa taaaactaac
      541 caattattta ttatattcac catcaaatat tcatcattat atttaataat tctatatttg
      601 ggatttttgt atatagctat tacctcgcaa agcaatgtct ccacatccct ttaattttat
      661 gtgtaataca tttttcgata cttcaaaaga cattaaaata ttatcaactt actatcatta
      721 aaaattttat tcattgttat ttgcatatct ttaatctgaa tttattacta ccacttaatt
      781 tttaagtatg acatgaatgt ttttatctat aattaaagct atattcacta gaaaaaaacc
      841 cattattgct gtaatccaag caaaatatac tattatgttt tgataactca ttgataatag
      901 agcatctagg aatagcatag tcaatccgcc aaataaaata tatccaaata atgtgaaaca
      961 aacatttttt agtgtaggta ttaaaaaaat ttttgacctt ttatttttag tattataaat
     1021 atttaaagat gattttttaa ttaggcgtac ataaaatatt aaaatcccta taaatgtgat
     1081 gcaacatatg gcaataacta attttttatc aagttgaacg tcaagtaaat gtgtatattt
     1141 tcttaatgca actcccagca aagcagagct acctgcaact ggccaaaaaa cattcttttt
     1201 agcaggttta acaatattta aattttcaaa ctcttctcta ctaattttga cgtatctttt
     1261 ggtgatgaac caattaataa aaggaaaaaa caaactaatc caagtgctta ttatatcgat
     1321 cattaagtac tcatcattat atttaataat tctatattta ggatttttat tgatgatttt
     1381 agattcgcac agcaatgttt acacccccta attagcaatt gaaaaccaac taaatttgta
     1441 actatttatt agactttaaa aatatatgta cttttttatc tataattgaa tgcatattca
     1501 ttaacataaa tagcatagtc atgaaaagcc aagaaatata taagattaaa ttttgtacat
     1561 tttcaaacac caacaagtaa aatgccccat aagacatgaa accagtaaag aggtaataaa
     1621 aaattgtgaa acacatattt ttaaaggagg gtaataatct taatttaagt tcattatttt
     1681 tattttcctt ataaacattt aatgttaatt tcttatttag ataacaataa aaaaatataa
     1741 cccctaaaaa actaataaaa cagctgctcc aaacaattag tttttctaat tgaaaatcaa
     1801 ataaataagt atttcttctt acagtaccac caagtaacac aatacccgcg aatatagtcc
     1861 atcctatcga tttattttta actggtttga caatatttaa tttttcataa tcattcttag
     1921 tgattttgac atatgttttc ggtatgagcc agttaataaa tggaaagaag aaaacaatcc
     1981 aattacttgc taaatcaatc attaagtatt cactttcgta tttgattatt cgatatttag
     2041 gatttttatt aataacttta gattcgcaaa gcaatattta ccaactccat ttcataggat
     2101 taatatgatt actaatactt tttgtggcat caccaatggt attaccaaca ctatctacag
     2161 ctttttctgc agttttgttt acagcatcaa taccctcgtc tattttatgt cctgcccagt
     2221 ccactttatc ttttatgcca aaataattat tttgataaag ataatcagaa acaatagatc
     2281 caataatacc tgctgttaaa atacctacca cagcccaacc gactggatta cttactaaag
     2341 ccgctacacc aaatgctgca acagatccag ctgcaagcgt cataccatta tgcgacaacg
     2401 cctccccaaa tgttttatca tcatttgcaa ggtcatcata catacctata ccaaatccta
     2461 cacctgcaac acctttacct agatattttc cacctttagc aaatttacta ccattttcta
     2521 taaacacatt acctgatgta cgtttgactt ccacaaatga atttggaccg gctgggcctt
     2581 tcactccacc tgctgtattg ataaatacac cgaatttact tgcatttata ccgccttgct
     2641 ctaaaagtgt tgacgtaata tctaatccta tatctcgttt aatactatct ttattgtcat
     2701 ttatatattt cattatactt ttcgggatat cgtcttctgg atgttctttg gcatatgcct
     2761 ttataacagc aaagtctgct ttatttaaag tttctttctc tgctttatgt tcaattttcc
     2821 ccatagcaac tttcaaatat ttttcatgac ttgctttggc ccaatcaagt tctttacctg
     2881 aaggaatgtt aaattgattt gttgaaaagt tccaaaaatt ttgcgcttgg gtaagtcctt
     2941 gttggacaat tttttgaaat tcttcaactt ctttaaatat ttctggtgat ttttgattaa
     3001 actcacgcaa tttgcgtagc ttctcttcta attcatgttt ttgttgacct aatgtttgta
     3061 ttatttgttg gttcgatgaa atggcttgct gattatcgga agcatgcttt ttcaaattgt
     3121 tagttaaatt ttcatatcgc gtaatttgtt gacttaatga tctgatatct tcttcaagct
     3181 ctgattcttt taaagatatg ctatcaacct cactcgtata acgtgacaca aaattatcgc
     3241 aagcttgctt cgttaaatca ctcaatgttt tcatacttgt tgataatgga attaacaccg
     3301 tactaaaaaa ttgtttagct gacgtatacg ctttaccttt aagcgcatca tcattgataa
     3361 attgagtaat tgctttttcc aacgcatcat aatttgaatt cattgtttga ctcaaattac
     3421 ccacacttga agcttggttt cgagatctgt ctaaatacat gtcaatactc atcggcatgc
     3481 tcctttttca aaaatatatg attttcaaac tatttaaaat taaatgcttt ttacatctat
     3541 aaagttgtaa aattttaaaa ctcagcgatg attatttctt atgtaaaggg gtctagatgc
     3601 aggtaaattg agataacatg tcgccttttt tcttatttta gcatatggat ataatggtgt
     3661 ctttgtatat tcacaattaa tcaataaaaa ttatctttca atattttaat tttattgcga
     3721 caacatcctt aatctaatat atattaatat ctcaaaatat atttacgatt taaatatgtc
     3781 accagttgtt gaaaatactt cctcatcatg cgaaatatca aaaaatatct aaaatacgaa
     3841 taagtttaca aaatcacaca acatcatcat tcaaaatttt attgccctca tttcaatatt
     3901 catttcatat ttaacagttc atacataact aaaatttcaa ttgtgcaatc tcaccgttaa
     3961 tgcaacaact ttcaaacaat aaatcatcac aataaccaca cctaattcaa cacttttcaa
     4021 acataagtat tgacacattg agcaaaatga tttttaattg taactaatac agttacaatt
     4081 atgaggtgag aaacattgaa tttagaattt aacattgccg tgcatgtatt agctttttta
     4141 actaagcatc attcagaaaa attcaatagt agttcattag ctgaattaac ttgtttaaat
     4201 cctgttcaat tacgacgcgt gacgactcaa cttgtcgatt taaaaatgat taacacaata
     4261 cggggtaaag atggtggata tttagcaaat gatcaaagtg ctgatgtctc tctagcaaca
     4321 ttatataaac attttgtctt agagaaaaaa caccacacac gtctatttac tggcgacgaa
     4381 ggcagtcact gtcaaattgc tcgtaatatt gcaactacca tgtcacatta tcagcaagac
     4441 gaacagaata tcattattaa tttttataat ggaaaaacaa tcaaagatgt cattgaagac
     4501 attcaaaagg aggatttatg tcatgaaaac atatgattta attgtaatag gatttgggaa
     4561 agctggtaaa actttagcga aatacgctgc atcaacaggt caacacgtcg cagttatcga
     4621 acaatcttcg aaaatgtatg gaggcacttg tatcaatata ggatgtatac cttcgaagac
     4681 acttgtacat gatggattag aaggcaaatc ctttgaagca agttataatc gtaaaaacga
     4741 tgttgtcaat gcgctaaaca ataaaaatta ccacttatta gcagacgata acaacattga
     4801 tgtactggat tttaaagcgc agtttaaatc taatactgaa gtgaatttat tagatcagca
     4861 tggcgatatc gccgatagta ttactgcacc tcatatcatt attaataccg gtgctacctc
     4921 tgtcattcct aacataaaag accttgatca agctaaacat gtcttcgatt caacaggttt
     4981 attaaacatt aactatcaac ctaagcacct cgttattgta ggtggcggtt atatcgcctt
     5041 agaatttgct tcaatgtttg cgaatttagg tagtaaggta acagtattag aacgtggtga
     5101 atcatttatg ccacgcgaag atcaagatgt cgttgcacat gctattactg acttagaaaa
     5161 taaaggcatt gcattgcata caaatgttga aacgactgaa ttgtcatctg acgatcatca
     5221 tacaacagtc cgtactaacg ttggcaactt tgaggctgat gcagtacttt tggctatcgg
     5281 acgcaaaccg aatacagatt tagctttaga aaatactgat atcgaattag gcgacagagg
     5341 cgaaattaaa gtcaatgctc atcttcaaac aactgtgccg catatttatg ctgcaggtga
     5401 tgttaaaggc ggacttcaat ttacgtatat atctttagat gattatcgaa ttatcaaatc
     5461 agcgttatat ggtaatcagt cacgtacgac tgacaataga ggcagcgtgc cttatacagt
     5521 atttatagat ccaccattat cacgtgttgg attaactagt aaagaagcag ccgctcaaca
     5581 ttatgattac actgaacacc aacttttagt aagtgcaata cctcgtcaca aaattaacaa
     5641 tgatccaagg ggtttattta aagtagtcat taataatgaa aataatatga ttttaggtgc
     5701 tacattatat ggtaagcaat ctgaagaatt aattaatata attaaacttg cgattgatca
     5761 aaacattcca tataccgtat tacgagataa tatttataca catcctacga tggccgaatc
     5821 atttaatgat ttatttaatt tctagacaaa acataaaaac ctggtggcac gcattgaatg
     5881 atgctgccat caggttttat tgttgtgctt ttcgcttttc taatttttct ttaagctttc
     5941 tatcttgttc ttctttacga cgtttacgtt cttcatgtcg ttttcttaaa cgctcttctt
     6001 cttcagaatc acgtggtttc tttaattgtt gagaaacttt ttcgattaat tcttcttcag
     6061 taagcgcagc cagtgggcgg ttattaacaa aagtgaatgt ttttcggcgt ccaggtccac
     6121 aataagattg acaacctatc acgatttcag catcgggatc taatttttcc aacttctttt
     6181 gtaacgttct tatattgact gcctgacatt catcacaaat aaggaatgta tttttcatat
     6241 tgctacccac ctttctttat catatctata tcgtcgattt cattaatttt ttcgttaact
     6301 ctatctattt tactcttttt aatatttttt tcaagatacg taacacggct ggcaataaaa
     6361 aatggagcat ttatcttcta attaaattag atgattgctc ccctatcaaa tcatttattg
     6421 cccatgataa atattaaatt ttaatggttt aataccatgt tttgtccatt catcataaat
     6481 tttttcttta tctacatctt tattgataat tgtaatacca cagtctccac caccagcgcc
     6541 tgatgtttta gatgcgccgt gatacttttc agcaatatca cacaaatatt ttagcttttc
     6601 agtttctata tcaactgtag cttctttatc catacgttga ataattgtac gattctgacg
     6661 caccatcttt tgcacacctt taatgttatt tgttttaaaa gcatgaataa gcttttcaac
     6721 acaacgatgt gaatcttcta agaagtcacc gtaaaatgaa ggatctgatt tcaaacgttt
     6781 cacttcgcta acaaagtgtg gtgatgacgc cggtgagcca gtccaaccga taagtacttc
     6841 catattttca ggtgcttgta atggttcgat gtgcaatcca ggccagtttt tgattaaaac
     6901 ttcttcaacc gtagtatctt caatttgatg cttaacccat tcatgatcaa aagtactata
     6961 cgctagccat ccactatata cactcacagc aatatctccg catgaactta aactttgtaa
     7021 cttcatattt gcaatcactg ctagtttata aatgtataaa ttagataact tcatatcata
     7081 aaattcattt aatactttta taactgacac aagtactgct gcacttgaac ctaatccata
     7141 tttatgacca tttgaatcat ctaaattact atcaatagtc agatgaaaat gcttcatcgc
     7201 tatatcgcaa cttttcgcgt attgttcaaa tatttcaata gctgtgacca cataatttaa
     7261 ttgttttgct gcatgtggat ctgaaatgac aatactatct tcatctctac taaatgtaac
     7321 tgggttatga tgtaatgctt ttgaatgaat ggtaccttta tattggtctg cttcttcaat
     7381 agtagcagtt acaaaacgat ctaacgcaat aagtacagat ttatatcctg gttctgttac
     7441 agcatattct ccagcaatat aaagttttcc gggtgctttg acctgaatca ttttatctct
     7501 tccttactca attatttcaa ttcctgtggc aataatgtca ctatcaataa tttggttatt
     7561 atcaaactgt gttaataatt tatctataat ctgttgcttg tttttctttt ctacaagtat
     7621 tttcacatta ggacccgcat ccatcgtaaa ataacacgga tatcccgctt ctcggcattc
     7681 gtgaacgagc gccattacat cataactttc ttgcacaaga tatgtgaacg gcggtgttga
     7741 tcctagattc gtggcatgca tacgcaaacc attttcttca attacttcac caagacgttt
     7801 aaaatctttg tcttgaatcg ctgcttttgc ttcagctaaa tcttcatcaa tatgatctaa
     7861 ccaatattga taaaaccttg atgtgtttcg tgtcaatgac ataccatatc gactaggtac
     7921 ctttttagaa tgttgattaa tcacaacaaa tatcatggca aggtcatctt caaaatgatt
     7981 cgattcaagt ggaacggcat atgacgtctc atcactatac cctttttccc attctgcaaa
     8041 tccaccataa atactacgcg acgcagaacc cgaaccaatt cgcgccaatc tcgataaatc
     8101 cttatctgac agctgcatgt ctagcgcttg attacaagct gctgctaaag ctgcatatgc
     8161 gcttgccgat gaagccaacc ctgctgctgt tggtacaaaa ttgtcgcttt caatttctgc
     8221 ataccaatcg atgccagctc tatttctgac aatatccata tattttgaaa ttttctctaa
     8281 ttctttgcca ctaacctttt caccattcaa ccaaaattga tcctgtgtta actggtcgtt
     8341 aaaagtgact ttcgtttcag tgtaaaattt ttctaatgta acagatatgc tattattcat
     8401 tggaatgatt agtgcttcat cttttttacc ccaatatttt ataagtgcaa tattcgtatg
     8461 tgcacgtgct ttgccacttt taatcaacgc attaacctcc taaattctca atccaagtat
     8521 gtgctgcacc agctttttct acagctttta caatattttt cgctgttggt aaatctttgg
     8581 caagcaataa catacttccg ccacgaccag caccagtaag ttttccagca atcgcaccat
     8641 tttctttacc aattttcatt aattgttcta ttttatcatg actaactgtc aacgccttta
     8701 aatccgcatg acattcatta aaaatatccg ctaaggcttc aaagttatga tgttcaatca
     8761 catcactcgc acgtaaaact aacttaccga tatgttttac atgtgacatg tactgaggat
     8821 cctcacaaag tttatgaaca tcttctaccg cttgtcttgt tgaacctttc acaccagtat
     8881 caataacaac catatagccg tctaaactta acgttttcaa tgtttcagca tgaccttttt
     8941 ggaaccaaac tggtttgcct gatacaatcg tttgcgtatc aataccactt ggtttaccat
     9001 gtgcaatttg ctctgcccaa ttagcctttt caatgagttc ttctttcgtt aatgatttcc
     9061 ctaaaaaatc ataacttgca cgaacaaaag caaccgcgac agctgcactc gatcctaatc
     9121 cacgtgatgg tggtaaattc gtttggatcg ttactgctag cggctctgta atattattta
     9181 attctacaaa acggttcacc aaagacttaa gatggtcagg cgcatcatat aacataccat
     9241 cgtaaacatc gcttttaata gacgaatagt tcccgctctc taaggcttct attaaaactt
     9301 tgattttacc tgcgttaaac ggtactgcaa tagcaggctc tccaaatgta acagcatgtt
     9361 ctcctattaa aataatctta cctgtcgatt ccccatatcc ttttcttgtc atgtcaatat
     9421 caccttttat atttatccta tacttgattc attattttta tttattagta aaagacatca
     9481 tattctaagt tgcatacgca ttcgcgtcaa atttcattgc agtctttatc tcacattatt
     9541 catattatgt ataatcttta ttttgaattt atatttgact taacttgatt agtataaaac
     9601 taactttcgt ttacttcaaa gtttaaatct tatcgagtga tatttcagat tctttatctt
     9661 tttataaaat agccctacaa tttataattt tccaccctaa ctataatact acaaataata
     9721 attggaatat atagatttac tactaaagta ttagaacatt tcaatagaag gccgtttctt
     9781 tcatagtcat acgcattata tataccctat tctcaatcta tttaatacgt aaaacatgaa
     9841 attttcttat taaatttatt atttcaatca tatcattact tttaatttaa tgatgttcaa
     9901 tttaaatatt aggccaataa catatttatg ctatttatgg atactttcaa aaataacagc
     9961 cccaaacgat aacttgaaag gggctgttaa atatttaact attgcatttg gtctatcatt
    10021 ttcttgtttc tttcaatcat tttatcaaaa tacgtatcgt atctttgcca ttcttcttga
    10081 gtaatgggcg tcatatttaa tacaccgcca agatctttga ttgcatataa tagtaaaaac
    10141 attacatctt gaacagtaat cgttttgtta agcaatgtct ctaatgaggc catacaagat
    10201 ggttcaattt caggatattt aaatttagtc acttcacctt ttaaagcatg ttcataaaat
    10261 gtttgcatca tcaatgcacg ttctgaacca gagccttcaa cacaaagata aatttgtaca
    10321 gcaataccgc ctctaactct tcgttgcgat atgcctgcaa attttttacc atcgatactt
    10381 aagtcaaatt ttcctgggca ataagaatgt tcaatttcca tcgtatcaat atcaacattc
    10441 tcatcttcga acattttgct aattaaaaga tacatcacag taaacgcttc atcaatcgtt
    10501 gtttctgttt gtcctttgaa catcagcgat atatttaata caccttgatc tagaacgaca
    10561 cctaagccac cagaatttct aacaatggca ttataaccaa tctcattcgt taaataatca
    10621 atgccatctt ttaaaaacgg caatcttgaa tcatgaatac caagaataac agtatgttga
    10681 tgaatccaag tacgcacaac attatctgat atatctttgc ccacactttc acaaaatgta
    10741 tcatcgaatg cgaaagattg cataggctct aatccagaag aatgatcgat atatcgccag
    10801 ttgacgccat taaaatattt actcgctaaa tccatcgtta ttgtaaggct tgcgctgctg
    10861 tgataattga aagattgtat acatcttcaa ttgaacagcc acgtgataag tcatttactg
    10921 gagaatttaa accttgtaat actggaccaa ctgcatcata tccacctaaa cgttgtgcaa
    10981 ttttgtaacc aatattacca gcttctaaac ttgggaatac aaagacattt gcatcacctt
    11041 gtaatttagc acctggcgct tttttctcag caacacctgg tacaatcgca gcatcaaatt
    11101 ggaattctcc atcaatgatt gcttctaatt tttcttcttc agctttttgt tgtgctaatt
    11161 tgacagcttc ttgaactttt gtcacgtcgt ctgatttagc agaccctttt gttgaaaagc
    11221 ttaacattgc aacttttgga tccatgccaa agcttaatgc tgattttgca ctttctactg
    11281 caatttctgc aagtccttgt gaatcaagtt ctggattgat tgcacaatca ccaaagatgt
    11341 attgttcatc acctttaatc ataaagaaga tacctgatgt tcttgataca cctggtttcg
    11401 ttttgatgat ttgtaaagct ggacgcacag tgtctcctgt tgaatgtgct gcaccactaa
    11461 ctaaaccatc tgctttacca gcataaacaa gcattgtacc gaagtagttc acattgttta
    11521 ataattcttg cgcttgttct tcagtcgctt tacctttacg tcgttcaaca aatgattgga
    11581 ctaattcagc tttaaattca cttgtcgcag gattaattaa ttcaatatta gaaatatcaa
    11641 gattaagttt ttgcgctaaa gattgaacct tagtctcatc acctaacacg attggtgtaa
    11701 cataatctgt tgcttgtaat tgtgttgcag ctgttagaac acgctcgtcc tctccttcag
    11761 gtaatacgat tttaacgttt ttaccagaaa gtttgtcttt taatacattt aataaatcag
    11821 ccataatgtc ctcctgtaat ataaatctta ttaatcattc acggtataat tatacgccat
    11881 tttatttcat aatgccacgt caccaatttg taatcataat tttatcgtta cccctttgct
    11941 ttatgataaa atttataaag aactgatgat ttttgaaaag gagcgataaa catgagtcaa
    12001 gcagccgaaa cattagatgg ttggtatagt ctacatttat tttatgcagt tgattgggca
    12061 tcattacgtc tagttccaaa gaacgaacgc gatgcacttg tcactgaatt tcaatcattt
    12121 ttagaaaata cagcaactgt aagatcatca aaatctggtg atcaagctat ttataatata
    12181 actggtcaaa aagcagattt gttattatgg ttcttacgtc ctgaaatgaa gtctttaaat
    12241 catattgaaa atgaatttaa caaattgcgc attgctgact tcctaatccc tacatattca
    12301 tatgtttcag tcattgaatt gagcaattat ttagctggta aatctgatga agatccttat
    12361 gagaaccctc atatcaaagc aagattatac ccagaattac cacattctga ttatatttgt
    12421 ttctatccaa tgaacaaacg tcgtaatgaa acttataact ggtacatgtt aactatggaa
    12481 gaacgccaaa aattaatgta tgaccatggt atgattggta gaaaatatgc tggcaaaatc
    12541 aaacaattta ttactggttc tgtagggttt gatgatttcg aatggggcgt aacattgttc
    12601 tcagatgacg tattacaatt caaaaaaatt gtatacgaaa tgcgctttga tgaaacaaca
    12661 gcacgatacg gtgaattcgg tagtttcttt gtaggacata ttattaacac aaacgaattc
    12721 gatcaattct ttgcggtttc ttaatacatt ggtacgttta taaattaata aaaaattcca
    12781 agcttatcgg tttaagcttg gaatttttcg tttatcttca gtatattccc gtatacataa
    12841 gacgtgattt ggtaaatagt tgaaatctgt atgtttaaac ttatatatat gtgctaatgt
    12901 attatcaata acaaagtaca ctttgctcat agcaaagtgt acccgagtag tcttccttgg
    12961 gagaacttta actactatca ctacatataa acgttaacct caatagaaat tatacagtcg
    13021 ctactctata caatttttgt aatggttaac taatattatt ttaacctatt tgaaatattt
    13081 gaaacatatt tttgtcgaat ttttttcaat aatttttcct ttttatactt caagagaatt
    13141 ttaactacta aaaattccga tgattattat tacaatagta tcaaatatta gttttttaaa
    13201 atcaataaca acttatcaaa aagctcatgt ggttatttta tagtgtataa actataatga
    13261 gtattaaatt cttataaaca atggtgatga aatggacata aattcagaag aatacaaaca
    13321 agaggtactt atcaaagacg ttgtcatgct tgctgctcgc atactattag aatctggtgc
    13381 agaaggtacg cgtgtagaag ataccatgac acgtattgca aaaaaacttg gttacagtga
    13441 aagtaacagc tttgttacaa acactgtcat ccagtttacg ttacattcgg aatcgtttcc
    13501 tagaatattt agaattacct ctcgagatac aaacttaata aaaatttctc aagctaataa
    13561 aatttcgcgt caaattacaa acaatgaaat ttctttagcc gaagcaaaaa cgcaacttga
    13621 aaaaatatat gttgctaagc gtgacagcag tcttcccttt aaaggttttg ctgcagcaat
    13681 gattgcaatg agtttcttat atttacaagg tggtagattg attgatgttt taactgcgat
    13741 attagcaggt agtctaggat acctagtcac tgagatttta gatcgcaagt tacatgcaca
    13801 gtttatccca gaattcattg gttcattagt tattgggatt atcgccgtta ttggacatac
    13861 acttatccca acaggtgact tggcaactat tatcattgcg gcagtcatgc ctattgttcc
    13921 tggtgtatta ataacaaacg caatacaaga tttatttggt ggacacatgt tgatgttcac
    13981 aacgaaatca ttagaagcat tggttactgc gtttggcatc ggtgctggcg ttggtagcgt
    14041 attaatttta gtataggagt atcagactat gttttggatc ttaaacttta tctttagctt
    14101 tttagcttca atgttcttct gcgtcatttt tgatgcacct agaaaattat atctatcatg
    14161 tggtttcgtt ggtacatgtg gatggatggt ttacacctta ttcttcaacg gctttaatgt
    14221 gcacactata tactctagtt tctttggtag tttagcatta ggcttgttaa gtcattatat
    14281 ggctcgtaaa caaaaagaac ctgccatcat ttttatggta acgggtatca ttccattagt
    14341 acctggtgga ttagcttacg atgcaacgaa aaatttagtc ttattaaatt tcagcacagc
    14401 aataaataca atgttagaag taacacttat tgcaggcgcc atcgcattag gtttattatt
    14461 cgccgaccaa atttccaaat taattgtttc tgggttcgtg aaatctttta aacgattata
    14521 aatattgtta gaaatggctc agcccaaact cttagcaatt atatataagg ttcagctgcc
    14581 tcgtcttaaa tgtcaattta taatacaaaa aatcgcacga tacgcctccg aatgaagaag
    14641 gtatattgtg cgattctttt attatttagt tttttctttt tcaggttctt caatcatatc
    14701 atcaacttca ttttcacttc tatttaaaat caagcgactt aattcatcat tatccatatt
    14761 tttcaattta ggatatcgaa tcacaaagaa tattaaaccg atgattaacc atccaagtaa
    14821 tgcaatataa gacggtgcag tcagtgctgc aggagaacct ggcactaata acaacgctaa
    14881 gaaaatgaat gatacaaatg agccgataat agcaaacgtt ttgtaaaccg gtgcatacgt
    14941 attactttgt ttgttataac tgaataattt cgctgcagac aaacatgtaa taaagtaggc
    15001 aatggataca cctgtagatg acatatctac aatccaagtc aatgcagttc ttcctagcca
    15061 aggtgcaatt aacgacacac ctactaggaa tatgattgcg acatatggtg ttttgtattt
    15121 actatgtaat ttactaaaca ttgttggcat aatacctgaa cgtcccatag aaaataacaa
    15181 gcgacttgaa ctcatcaaga atccatttaa accagtaaat atacccatca taattgcaat
    15241 tgctaataca cctaatccaa tataaccaaa tgctgtttgt gtaacagcac ctgttaacca
    15301 caactgccca tttaaacttt gatgacttgt tgataaccaa ccagtgtata aaatcatgac
    15361 aacataagtt aatgatgctg ctaataaact gtacacgata agcttaaatg tcttgtttgg
    15421 tgcaaagtta aactcttctg ctgtttgtgg aatattatca aatccaacat atgcccatgg
    15481 tgccacggat acaataacca caatagacac taaccatcct ttgctaggtt cagctaacgg
    15541 ttgtaaattt tcaagtgcaa aattattacc aaagaatgaa ccaaagaaca tcaataatac
    15601 gacgattacc atcgccacac agaaataata ttgtaatgat ccagatacac ttgcgccacg
    15661 aatcgttact agcatgaata caagtagtaa tacggtcgca ataatgattt ccgtaatata
    15721 aacgtcccag cccgcaatgg tgtatagttt cccattattt aagacatctg gcaataagaa
    15781 tttaactagt aaactgaatg cggtcgcatt taaagcaacg acacagacat aaccaaaagt
    15841 taaaaaccat gatgagaaga aactcacata tctgccgaaa cttaagaaac taaaggcaaa
    15901 cgcgccccct gatactggaa atctctctac taatgcgcca taactaaccg caattaatat
    15961 cattaataat gcaccaataa caataccaat tgatgctgca atcggacctg actgcttaat
    16021 ccagtctcct ggtaagatga atgcgcccca tccgatacat gaaccatatg caatcgccca
    16081 tacaaacttt tcagataggt tttgttttaa atcgcctcta tctatttgct tattcttttt
    16141 ttccataaat aaaaactcac ctcgaaggta ttctataccc aaaagatgag tttgtaactc
    16201 tttttcttga ttatttttat taaaaattta atgtttagtt acataggtaa tctaaagttt
    16261 taaaatttaa ccagcaaatt tgaatgtcgc aatgattaac attatccatc caatgatgaa
    16321 caatacgcca ccaattggcg taatcgcacc taaaacttta atttgagtta atactaaaat
    16381 atataatgat ccactaaaga aaataatacc agcaaatatt aaccagccag cccagttaac
    16441 attgattgaa gttgtaccac taattacacc tataattaat aatgctaagc catggtacat
    16501 ttgatacgtc gttgcttttt cccatactga taaatagtga tcacttattt ttccttgtaa
    16561 accatgcgca ccaaatgcac ctgttccgac agccatcatc gcgtttaatg cacctaaaat
    16621 aataaataat ttcattgcta cctctcctta tataattcag tattaataaa tgtttaaatc
    16681 cgaacactcg aatataagta tatgtgtctt gattattaac ctacatactt aacaagctat
    16741 taagtaatta tgtttcattg ttgcttttta aaaatcaaat atggattcac cattgccaat
    16801 gtcatcatct gtcgctaatc tttgttgttg gtttgaaggt tgtgaatatg acttattatg
    16861 atgatgtgct gaatgcgtat ttactttacc acccatcgct tcaatttcag cagctgtcac
    16921 ttgatgagtt ggctgcgtta tttgtgattg tggcatttga ttatggttag caatacgacg
    16981 gttcatttgt tgttcaccaa tatgtggtgt atttgatgtt gaagcatata aagatgttaa
    17041 tatatgtatg gcatacatat gtttttcaaa gtcatggtca tgctgcgcct gctctgcttg
    17101 tactaattct tgctcaattc gtgctattaa agtttctcta ttcaccatct atgcctcact
    17161 ttcacaccaa ttaattggtg attttcctac tgactctaaa taggcattcg ctttggaata
    17221 cggttttgat ccaaagaatc ctctatatgc agacagtgga ctaggatgca ctgattttat
    17281 aatacaatgt ttagatgtat cgataagctt tattttttgc tgtgcaggtt tcccccacaa
    17341 aataaagaca acatgttctt tataatcaga cactgcttta ataatttcat cagtaaatgt
    17401 ttcccaacca atatcacgat gagaatttgc ttcaccctgt cttacggtta aaactgtatt
    17461 caataacaag acgccttctc ttgcccaatc ttgtaaatgc ggtgtttgtc taacacatcc
    17521 aatatcatct gctaattctt tatacatatt acgtaaagat ggagggaatt ttgcgttagg
    17581 ttgcactgaa aatgctaatc catgtgcttg gtttggacca tgatacgggt cttgtcctaa
    17641 tataacaact ttgatatttt caaacggtgt taaatcaaac gcttgatata tattttccct
    17701 atcagggtat acgattgcag tcgaatattc tttttctaaa aaatcatgca taactttaaa
    17761 gtcatgtttc gttgttatgt catgaaaaat ttgcgaccat tccattcaat ctcacctcag
    17821 gacatatttt aacatatcac acttatctaa agtgaatgac attttcaaaa gttacaatag
    17881 tatgaatgat tcatttcaac aatcatcaaa tattgaatgc ttaatatttt tcaattaggt
    17941 taaaaatgat atgatgaata caatattatt atgtaggagt gaagctcaat ggctttaaag
    18001 aaagttttaa caattgccgg ttctgacaca agtgctggcg caggtatgca ggcagattta
    18061 aaaacatttc aagaattaga tacgtatggt atggtcgctt taactgccat cgttactatg
    18121 gataaagata catggtcaca cgatgtcaca ccattaccta tggatgtatt tgaaaagcaa
    18181 cttgaaacgg ctttatcaat cggacctgat gctattaaaa caggtatgtt aggtactgag
    18241 gagataatca aacgtgctgg agaagtatat gaggcatcta atgcacaata ttttgtagta
    18301 gatcctgtca tggtttgtaa aggcgaagat gaagtgctta atcctggaaa tactgaggcg
    18361 atgattaaat atttactacc taaagcaacg gtagtgacgc caaacttatt tgaagcgggt
    18421 caattatcag gattaggtaa attaaattca attgaagata tgaaaaaggc tgcaacaatt
    18481 atctttgata aaggcgcaca gcatgtcatc attaaaggtg gcaaagcttt agatcaagat
    18541 aaatcgtatg acttatacta tgatggtcaa acattttatc aactaacaac agacatgttc
    18601 caacaaagtt ataaccatgg tgctggttgt acatttgctg cggcaacaac tgcatattta
    18661 gctaacggta agtcaccgaa agaagctgtg attagcgcga aagctttcgt cgcttctgct
    18721 attaaaaacg gttggaaaat gaatgatttt gttggtcctg tggatcacgg tgcatacaac
    18781 cgtattgaac atatcgatgt tgaagtaaca gaggtttaac gattaggcgg ttcatctata
    18841 aatcaacatt attagccaca ccacttaaat tgggtatgaa ctcaatttat gtgatgtggt
    18901 tattttttta taatcatcat gctctgtata taatttgaat ttgaaagtta catataagcg
    18961 ttattagctt ttattgaaaa tttcatacat atcgaacaat acatacaaat atttcctata
    19021 catctacatc tatgactaaa taacccttta ttttcaagat gaacttaaac tcatctatat
    19081 gctcaatacc tctatcatta tcattctttt gcgatagatg cctctctaat catatatgtt
    19141 atatttccca aatgactgcc aggcgactca ttaaatatat atttatttag aacttttata
    19201 cataaatagt cttagtaaat catacgttct atgtctgata aaaagttgat acttaaggtt
    19261 gatgtcacac ataaaaatgt tatttataat ataaccatag agtagcaaag gaggtaatat
    19321 aggttatgat tatttatcga cagtatcacc atgaaggcgc accagtttat gaaattataa
    19381 ccaaaacgtt tcagcatgtt tcaattaaat gtgacgattc atttagtgat actgaaatat
    19441 tcaaattgct ctctttatta caagacgata tagatcatat gaaagttagt taaattgact
    19501 aatcgttcca ataatccaga atttattaaa cattgatata gttgttatta ttattttaga
    19561 ttaatgcatc cccgtgcaaa gaaagaatcg taacctatat tcatctctgt tcccaataat
    19621 aataacaata cataactgat attagctgtc ctttcatctc ctaattaata tgcgttcatg
    19681 cagctaatat cggttatttt tttgtgctca aagaaatttt tattttaatc tctccatcgt
    19741 cattaattgc tataatttct tgctcgtgtt gttcaatgaa ttcgatattt tcatttatta
    19801 aaataggttt aacgtagtta atttgacact ggtttgtctc taatgacata gccatcagca
    19861 tcatttgact cactaattgt cctggcacaa tctcattatg tattggatta tcatcattta
    19921 cgagcgccaa atattcattt atccatatct cattaaactt catctctact tcatcgcctt
    19981 aataaaagtt tgtgtaaccg ttatgacatg ttgatcattt ttagttaatg ttaaagccat
    20041 tgtataacgt gtgatattgc gaatctgtcg gcattcaata tcttctaaac gtcctacata
    20101 tattgtgtct acttctatct tttgagtttg attaattgct gattttgtta aaatcagttc
    20161 gctatttgca tattttttaa ataaatcaaa ttttgaccat aatgacgcac acattaatgg
    20221 tggtacttct tttctataag gttggttaaa acactgataa tatgcagcca cactatcctt
    20281 agaaaatgac acatttaatc gctggttaga atcgagtgaa taatgctgca tttcctagac
    20341 ctcccccaat ccccatagat gcaatcatag tctctttgtc aaacatataa aataatcgcg
    20401 tcactaattg ggcaccgctt gcaccgtatg gatgacctga tgctaatgca ccaccccata
    20461 tatttaattg cgtatttgaa atatttaaag cttgttggca ggcaaccacc tgtgcactga
    20521 acgcttcgtt aatttcaatg acttcaatat tttctatcgt taattgattt ctttttagta
    20581 agttggaaat ggctggtact ggaccaatgc caggaaaatt agaatcaaca cctaccgtaa
    20641 caccatcttt aaataataaa ccatgctcga aacctaattc gtatgccata tctttttcca
    20701 taataagcaa taaaactgca ccatcatttt tcatacaact attcgcagcg gtaacggtcc
    20761 cacctttgat cacgggctta aatcggccaa agttatcttt cggaatatgt gattttagac
    20821 tttcatcagt gttgaatatt tctcctttaa cggttatagg taatatttcc tgagaaatat
    20881 ttccattctt tacattttcc gctgtcaatt gatgacttcg ataagcaaat tcatcttgta
    20941 attctcttga aacatcatac atcttggcca cattttcagc accttgaatc attgatgggt
    21001 cgctcatttc aggtgcaaat gatgcacgct cataaaactc aggtaatgct gtttcgtaca
    21061 cagaatgcgg tcgtttgatt ttccaaggtg ctcgacttgt actttcaaca ccacctgcaa
    21121 tatatacctt gccagctccg gcttggatca tgcgacatgc atattgaaca ctttcaagtc
    21181 cagacccaca ttgccgatcg attgtgacgc caggtattga atctttaagc cccgcttcaa
    21241 gcaatgcttt tcttgcaata ttgccaccat tcccaacaac attacctaaa actacatcat
    21301 ctattttaga tattacctct ggatacttct ctttaaaatg ttggaataaa ggtttaagca
    21361 attgttctgg ctctaaatgt tttaaagtgc caccatattt cccaaatgca gttcgtttag
    21421 ctgcaactat gactgcttga ttcatattat aattcacctc tcaaatacat cgatatcatt
    21481 ttttctctag caattttacc acttgcagtg taatacatct tttctacatg atgaatcatc
    21541 gatggaattt catagcgttt cactttcttt tttaaaaatt gttttacatt tttatgtgta
    21601 agtgtcacat cactagaata aagcaatacg cctatttgac caaaacgctc atttggaata
    21661 ccgatgataa ttgcttcatc aatgctcgac gattgcgtta aaaggcgttc aacatgtgct
    21721 ggatatatat tttgaccacc aataattaac atatcctgtt gacgtcccgt taaatataaa
    21781 tactgctctt ttacatagcc attatcatta gtaacaaacc attcatcatt atttatacat
    21841 tgttcactta catagccact aaacatcata ttacttttta tacaaatagt tcctatacca
    21901 ttgtgatcgt gatccgttgt tttcaattcc acatttggaa atagcacacc tactgattca
    21961 actggtgctt gctgattcaa gttatagctg ataaaactgg tttccgatgt accaaaaaat
    22021 tcaatcaaat ttatgtcatt tgcttgattt tttatctttt taaaaataga agaatgcagc
    22081 ttatctccac tgctaaaaaa tgattggatt gtatgttcat tgttgtaaac taacaataat
    22141 gatttaatca tcgttggaac aagaaacata gcaactttgt atgatgatat tttacgacat
    22201 tgattaagta acttttcagg atgaaaagtg gtctgtccta taaaagtacg accggaactt
    22261 aaagcaaaca ataacgcata taatgttaac gagtgcgata gtggtccagg ggctgctatt
    22321 gcattttcat tttttaacat caacatttca ttaacttcaa aagaagccaa ccatgaatct
    22381 tcatcacgat aatatgcttt tggcagtcca gttgtccctg aagtaaaacc aatatgtaat
    22441 aaattgggat agtgctgtaa ttgcgttgaa tcaataaaca tcggtgaatc tatactctgc
    22501 atgagacctg tatctccaat tacatcttta ataccatatt tttcaatcaa ttgacgatgt
    22561 atagtacttt gccatttacc ttccatcatc ataggcactt tatgtaaacg atgcaaagct
    22621 aaataacaaa taatactttg caccggtgat ttcatattaa tagcaacgac aggattaagt
    22681 gaatatttct gcaaagattc aactgcacta gtgatgcggg catttagttg actatatgta
    22741 attgtttcat catcgatatg taatgctatg tcattaggtt tattttgagt atgtgttttc
    22801 aactgttcta aaattacgtt catcaatatc cctcactcaa tgtaaacttt aaaatacatc
    22861 ttgttaacat tatataatga ataagtattt ttatcaggta aacctgccta ttataaaaat
    22921 caaacttaag ccctagataa atttgatact gtagtaccat gttttttatt agataagacg
    22981 ttactatatg tatatagaga aaagaagtta tcgcaatcgc aataactgac acaaataagt
    23041 cacccaatct atttaagttt gtgttctcta taataatatt gaaggttaga gtctcaatat
    23101 taattgcgtt ggacaaaata ctctaagaca tatttacatc ctaacatttc aatagcaaga
    23161 gaattttaag tattcaaagc taaacatatg ctttaagtcc cctctttccc ccattgcgat
    23221 aatcattgca gtgggggttt atgtatatac aaaaacttta ttacggctaa ttacagttct
    23281 caatttaaaa agcactttaa agttagcaga acctactagc tttaaagtgc ttatatacga
    23341 ttgatttata ctttttatta aaatctctaa ttcttacgtt ctttaaccca ccataatgct
    23401 tcttttgggt gttctgcata ataagctcta tcttgctcgt tatctacatt tggatacgaa
    23461 ccttttagag attttcctgc tgtacttaaa tgtaagaatg taataactaa aaagccaata
    23521 acactgattg ctgttaaata atacgcaggt gctaatggat ctccagtttt cgtaactaac
    23581 catgttgcaa ctaatggcgt cgtaccacca aatatcgaaa cagagatatt aaatgttact
    23641 gataaagttc gatatcttat atgactgtaa aacatcgttg gtaacgaccc tggcattgtc
    23701 gcttcgtaag ttgataagaa aaatcctaat ataaatatac cgattactat tacaacaaat
    23761 gattgtgaat gtaataacat aaatgcgatg atactaaata atgttagccc accagtacca
    23821 attagaaata ctttcttttc acctatttta tccgctaact taccaaacat taatgctaat
    23881 ggaatcatta ttgccatgac acaagtaatt aatacacttg ttgtcgttgc atctaattta
    23941 ataacttgtt ctaaataggt tggtaaatat gcagttacca tatagttcgt aacattgaag
    24001 aatacaacag ctacaaaaca cacaaatata tctttgtaat aaaatctgat gatttgtaaa
    24061 aagttaatgt tgtctcgttc tggttgtgtt gcaacatcat tttcgaaaac tggtgattct
    24121 tcaagcttac gacgtaaata taagccgaat aatcctagga ataaaccaag taagaatggg
    24181 attctccaac caaatgatgc catttgttca tctgttaaaa agaatgttaa tacagcaatc
    24241 ataattgaag cagctatgta acctgataat gtcccaattt ctagtccact acctaatgag
    24301 ttacgaagct tatctggaga tgattcggca acatatgtca ttgcccccgc atactctcca
    24361 cctgttgaaa atccttgcag tactcttgca agcaataata gtattggtgc ccaaagtcca
    24421 atttgatcat agcttggcaa taatccaatg gttaatgttg aaaatgccat taaaataatt
    24481 gtagatgtta atacaacttt acgtccatat ttgtcaccaa taataccaaa tacgacacca
    24541 ccaattggtc ttaataaaaa cgcaatggct aatgctgcga aagtcaacat ttgtcgaatg
    24601 tctgcattct ctactggaga gaagaagttc gctccaatgt acgcagttgt atatgcatag
    24661 acaccaaaat cgaaccattc cattgcatta ccgataccgg ttgcaacaac ggttttttta
    24721 gctttctttg catccaccat gttaatattc tctttattaa aatccatgaa ttcatacact
    24781 ccctcttgta tgtttcataa ttatacggag ttaattagtt ttgtcaaatt tataagaatt
    24841 taaactttta tataaataca aaagtatgtt tgttcaaaaa tttcacttta tcgaattaaa
    24901 ttcaatgatt t
//
LOCUS       DAKPJH010000030        24007 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.030, whole genome shotgun sequence.
ACCESSION   DAKPJH010000030 DAKPJH010000000
VERSION     DAKPJH010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24007
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.030"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(140..553)
                     /locus_tag="OY092_001035"
     CDS             complement(140..553)
                     /locus_tag="OY092_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075990.1"
                     /translation="MKPTKVILRDASYLHSKTSITFILKDVVIEEDNKIYYFDTSATF
                     EDQEVKFEFALFDSDMDNLKHMDYDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDS
                     GLRHSNMATESGISLRINVAKSDFTKFINELASLH"
     gene            complement(582..692)
                     /locus_tag="OY092_001036"
     CDS             complement(582..692)
                     /locus_tag="OY092_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075991.1"
                     /translation="MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT"
     gene            complement(778..1509)
                     /locus_tag="OY092_001037"
     CDS             complement(778..1509)
                     /locus_tag="OY092_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HCX1075992.1"
                     /translation="MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINE
                     TEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGK
                     KYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTL
                     GHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPK
                     EIDNEAEIQAKQVLIDRANRQKKSR"
     gene            complement(1511..2824)
                     /gene="murT"
                     /locus_tag="OY092_001038"
     CDS             complement(1511..2824)
                     /gene="murT"
                     /locus_tag="OY092_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II isoglutaminyl synthase subunit MurT"
                     /protein_id="HCX1075993.1"
                     /translation="MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLA
                     EQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKT
                     KIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKL
                     LLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQ
                     IGHYHCQCGFKREQAKYEISSFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYSVLR
                     ELGLNEQTIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEK
                     VYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPI
                     IVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS"
     gene            3116..3616
                     /gene="ftnA"
                     /locus_tag="OY092_001039"
     CDS             3116..3616
                     /gene="ftnA"
                     /locus_tag="OY092_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-type ferritin FtnA"
                     /protein_id="HCX1075994.1"
                     /translation="MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFI
                     QQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFY
                     NLSEIARQDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGA
                     RTFDEE"
     gene            complement(3698..3790)
                     /locus_tag="OY092_001040"
     CDS             complement(3698..3790)
                     /locus_tag="OY092_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1075995.1"
                     /translation="MTKNTIISLENEKTQINDSENESSDLRKAK"
     gene            4006..4560
                     /locus_tag="OY092_001041"
     CDS             4006..4560
                     /locus_tag="OY092_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HCX1075996.1"
                     /translation="MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNP
                     QDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQ
                     NIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITF
                     RLLKNYENLTYVTNIYGKNLKDKG"
     gene            complement(4628..5698)
                     /gene="dinB"
                     /locus_tag="OY092_001042"
     CDS             complement(4628..5698)
                     /gene="dinB"
                     /locus_tag="OY092_001042"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HCX1075997.1"
                     /translation="MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVS
                     TASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPM
                     SLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKP
                     DGLTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFG
                     KRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERL
                     NKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRL
                     IGVTVGNLEQSTYKNMTIYDFI"
     gene            complement(5945..6475)
                     /locus_tag="OY092_001043"
     CDS             complement(5945..6475)
                     /locus_tag="OY092_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HCX1075998.1"
                     /translation="MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQ
                     NIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKW
                     QFSIIMLSPLFLLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYV
                     QQDEDSIYLYHQKPTQ"
     gene            complement(6645..8006)
                     /gene="rlmD"
                     /locus_tag="OY092_001044"
     CDS             complement(6645..8006)
                     /gene="rlmD"
                     /locus_tag="OY092_001044"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HCX1075999.1"
                     /translation="MQAIAKNDIKMGTVVDLTHEGHGVVKIDRFPIFIPQALINEQIE
                     YKIIKVKKNFAIGKLLNINTRSENRVAPPCIYYERCGGCQLQHLSYEAQLEMKKEQVI
                     NLFQRKAHFDNSKFNDTVGMTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDME
                     SCLIQDSQHQEVMNEVKSILKDLNVSIYQEQLKKGLMRHLVVRTGYHTDEMMIIFVTN
                     GKKWPQKNAVVEKILDAFPNVTSIKQNINDSHSNVIMGRQSITLYGKDTIIDQLTDST
                     FKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVLDTYCGIGTIGLYMAPHAKHVYG
                     VEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVILQWKAQGIKPDVVMVDPPRKGCDE
                     TFIQTLLTLEPKRIVYISCNPATQQRDALLLAEKYQLEEVTPVDMFPQTTHVETVALF
                     NLK"
     gene            complement(8087..9034)
                     /locus_tag="OY092_001045"
     CDS             complement(8087..9034)
                     /locus_tag="OY092_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HCX1076000.1"
                     /translation="MRKRARIIYNPTSGKELFKRELPDALIKLEKAGYETSAYATEKI
                     GDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRAL
                     HIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPF
                     AYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGY
                     FTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGG
                     KLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE"
     gene            complement(9672..9818)
                     /locus_tag="OY092_001046"
     CDS             complement(9672..9818)
                     /locus_tag="OY092_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076001.1"
                     /translation="MIADLDAIEGLFISIEVILLLTLFIVHVNGKNINFINALALIIL
                     RQTV"
     gene            complement(9858..11285)
                     /gene="gatB"
                     /locus_tag="OY092_001047"
     CDS             complement(9858..11285)
                     /gene="gatB"
                     /locus_tag="OY092_001047"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HCX1076002.1"
                     /translation="MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAY
                     PGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGEN
                     GYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSP
                     KEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFN
                     YVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIV
                     PLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHG
                     ADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPE
                     LAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNNEQSVEDYKNGKGKAMGFLVGQ
                     IMKASKGQANPQLVNQLLKQELDKR"
     gene            complement(11298..12755)
                     /gene="gatA"
                     /locus_tag="OY092_001048"
     CDS             complement(11298..12755)
                     /gene="gatA"
                     /locus_tag="OY092_001048"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HCX1076003.1"
                     /translation="MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFL
                     ALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPI
                     YESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
                     AVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTR
                     NVKDNAIVLEAISGADANDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDV
                     KEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSK
                     EAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKV
                     FENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRP
                     IGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEKL"
     gene            complement(12757..13059)
                     /gene="gatC"
                     /locus_tag="OY092_001049"
     CDS             complement(12757..13059)
                     /gene="gatC"
                     /locus_tag="OY092_001049"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HCX1076004.1"
                     /translation="MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDS
                     ADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA"
     gene            13425..14963
                     /gene="putP"
                     /locus_tag="OY092_001050"
     CDS             13425..14963
                     /gene="putP"
                     /locus_tag="OY092_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HCX1076005.1"
                     /translation="MLTMGTALSQQVDANWQTYIMIAVYFLILIVIGFYGYKQATGNL
                     SEYMLGGRSIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAMWITIGLTLGAYINY
                     FVVAPRLRVYTELAGDAITLPDFFKNRLNDKNNVLKIISGLIIVIFFTLYTHSGFVSG
                     GKLFESAFGLDYHFGLILVAFIVIFYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVAM
                     MNLNGWGTFHDVAAMKPTNLNLFKGLSFIGIISLFSWGLGYFGQPHIIVRFMSIKSHK
                     MLPKARRLGISWMAVGLLGAVAVGLTGIAFVPAYHIKLEDPETLFIVMSQVLFHPLVG
                     GFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEKAKTHQKEFVMIGRLSVLAV
                     AIVAIAIAWNPNDTILNLVGNAWAGFGASFSPLVLFALYWKGLTRAGAVSGMVSGALV
                     VIVWIAWIKPLAHINEIFGLYEIIPGFIVSVIVTYVVSKLTKKPGAFVETDLNKVRDI
                     VREK"
     gene            complement(15052..16251)
                     /locus_tag="OY092_001051"
     CDS             complement(15052..16251)
                     /locus_tag="OY092_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HCX1076006.1"
                     /translation="MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIA
                     TDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQ
                     DGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEK
                     SPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDSEVK
                     KQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNE
                     WHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRL
                     VVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEP
                     QVHIYSN"
     gene            complement(16264..18267)
                     /gene="ligA"
                     /locus_tag="OY092_001052"
     CDS             complement(16264..18267)
                     /gene="ligA"
                     /locus_tag="OY092_001052"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HCX1076007.1"
                     /translation="MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIK
                     IEEEHPEYKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQI
                     GNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPL
                     NVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFI
                     YSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYD
                     IDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTA
                     ILEPVKVAGTTVSRASLHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDA
                     VTYHMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKI
                     IQQLYQSELIKDVADIFYLTEEDLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLG
                     IRHLGVKASQVLAEKYETIDRLLTVTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQ
                     KLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTGKLHQMTRNEASKWLASQGAKVTSS
                     VTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVDKQNELNS"
     gene            complement(18271..20463)
                     /gene="pcrA"
                     /locus_tag="OY092_001053"
     CDS             complement(18271..20463)
                     /gene="pcrA"
                     /locus_tag="OY092_001053"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HCX1076008.1"
                     /translation="MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     LDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADR
                     IGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKE
                     ATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHV
                     DEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTI
                     FLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIR
                     EIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLS
                     YLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSK
                     KVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENID
                     EFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIV
                     FIMGMEESLFPHIRAIKSEDDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQS
                     NMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGD
                     KVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED"
     gene            complement(20460..21152)
                     /locus_tag="OY092_001054"
     CDS             complement(20460..21152)
                     /locus_tag="OY092_001054"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HCX1076009.1"
                     /translation="MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVT
                     EDNVIHLMSRVRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGILLEALK
                     TYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYI
                     EYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKK
                     ALKTVKIKESSK"
     gene            complement(21324..21626)
                     /locus_tag="OY092_001055"
     CDS             complement(21324..21626)
                     /locus_tag="OY092_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076010.1"
                     /translation="MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLS
                     QRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE"
     gene            complement(21735..23030)
                     /gene="purB"
                     /locus_tag="OY092_001056"
     CDS             complement(21735..23030)
                     /gene="purB"
                     /locus_tag="OY092_001056"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HCX1076011.1"
                     /translation="MIERYSREEMSDIWTDQNRYEAWLEVEILACEAWSELGHIPKAD
                     VQKIRQNAKVNVERAQEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTAL
                     SFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTE
                     MQRNLQRFKQVREEIEVGKMSGAVGTFANIPPEIESYVCKHLGIGTAPVSTQTLQRDR
                     HAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSEN
                     ITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIVDRL
                     TVFEDNMRNNIDKTFGLIFSQRVLLALINKGMVREEAYDKVQPKAMISWETKTPFREL
                     IEQDESITSVLTKEELDECFDPKHHLNQVDTIFKRAGLA"
     gene            23617..23970
                     /locus_tag="OY092_001057"
     CDS             23617..23970
                     /locus_tag="OY092_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000612779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
                     /protein_id="HCX1076012.1"
                     /translation="MPRKYLNPKIPQGRGKIKWQAFATLPQQFEILEQIIKDQNKIEK
                     PLLTHDSLDNLDQIFQIKIQNDELCTISYWEDGSISNYTGKILKIDTINGYFTFYDST
                     NTKHTFFNTNVYNIS"
BASE COUNT         7340 a         4420 c         3397 g         8850 t
ORIGIN      
        1 gcctcttttt atcgtatata gcatgtccct ttttaaaatt acaagcataa atattcagac
       61 tcaaatatag ccacacgcct aaactacgga gggatgtggc tgtctttttt gattgtaatt
      121 atgtatcaga tttaaatcat taatgtaaag aggctaattc attaataaat ttagtaaaat
      181 ctgatttagc aacatttatc cttaatgaaa taccagattc tgttgccatg tttgaatgcc
      241 ttaaaccaga atcaaaatca atataaatac aaagcagttc ttgattaaaa tcaataatcg
      301 taaaatgtaa atcaggttct ataaaatata tttcggtaac aggattgtcg taatccatat
      361 gtttcaaatt gtccatgtca ctatcaaaaa gtgcaaattc aaatttaact tcttgatctt
      421 cgaaagttgc actagtgtcg aaataataaa ttttattatc ttcttcgata actacatctt
      481 ttaaaataaa tgttatcgat gttttgctat gtaaataaga tgcatctctt aaaatcactt
      541 tagtgggctt catcgtcaaa ttcctttcat cattcatttt ttcatgttgc ataatcacca
      601 ttactattga taattctagg atagatactc attgtataat aattattcac tagaacaaaa
      661 aaacacacat caatttggtt gtttccatcc aaaataatgt gtgtgtttat acatatatga
      721 ttaattacta aacttcatcg tttatcaata ttaaatccat tgatgcgata ttcagagtta
      781 acgagatttc ttctgtctat ttgctctgtc tattaatact tgtttcgctt gtatttccgc
      841 ttcattatct atttctttag gctcaaacgg aataccctta cgttcacaag ctttttctaa
      901 cagataatca gtgatttcgt aatttttagg taaaattggt ccgtgtaaat aagtacctaa
      961 taaattttta taatgaatgc cttctttttt atcttcatca ttattaccat aaccaaaagt
     1021 aacatgacca agtgtaccga aatcatgata tgttctacca ccgtgatttt caaaacctac
     1081 aatagttcca aaagtatcac tttcgataac aatatctcct gttaatcggt ttgtctttga
     1141 ttcagtataa aaatctaaaa tacctaaccc ttctaattct gtaccatcag gcgtgatata
     1201 tttttttcct aaaaattgat agcctccaca aattgttaat cccggcatac catcttcaat
     1261 cgcttcttta agtggtgtct taattttact taattctttt gttgctaatg cttgttctct
     1321 atcacttcca ccaccgataa agaaaatatc acattcatca aaggtaatac cttctgtttc
     1381 attgatttct acgacattaa ctttaatatt tcgtttttta gcacgttgtc ttaaagcaat
     1441 aatatttcct atatcactgt ataaattcaa tttatctgac ataaaatgat aaatagtcaa
     1501 ttcatgcata ttatgattga cctccttcaa acgaacggtt taattgttca agcataggcg
     1561 ctaatgatgt atagtttggt attgcaactg tgaaaccttt ataatccata gtctttgccg
     1621 ttgctttata aatatcacgc tcaactataa ttggtacttc aacctctgct aacttcaatc
     1681 gcaattgaag ttcttctgct cgtgtacctg tcacgatgat agcttcaatt tgttgcttag
     1741 ataatttttc aaaatctgca tcataaatcc atgaagtatc tcgaccatct gcagcgttat
     1801 catttagcga aataacatac actttttcgc cttctaattg ttcaccaact gataaacttg
     1861 cattcattcc tgcagggttt ttagctaaat tgatcatcgc ttcttttcgt tcttttttaa
     1921 agtactgcat acgaccattg tctgatgtat acgtttcaaa gccattttta attgtttgtt
     1981 catttaaccc aagctctctt aaaactgaat atgctgctaa cgcgttataa gcgttaaagt
     2041 cacctgcaat tttcatatca tatttttcat cattgatatt taaatgtaaa aacggtgcca
     2101 catcaaaact tgatatttca tattttgctt gctctcgttt gaaaccacac tgacagtgat
     2161 aatgaccaat ttgattataa tgaatataat cgtattgcaa taagcgacca cagtttggac
     2221 aatatctact ttcattcatc gtactttgtt caaattcatg ggcatgtgct ttcataccat
     2281 agtacacaat cgtatcactt gcgattttca aacgactcac aaatggatca tcagcattta
     2341 gcaataattt gatgccttta ttactaattg tctctgcaat gttattaacc ataatatcaa
     2401 tttcaccgaa gcgatccatt tgatctctaa agaaattagt aaataccatc attgaaggtg
     2461 taacttcttt taacacacgt ggaatcgaac cttcatcaat ttcgattacc gcaattttag
     2521 tcttaggtgt tgattgcatg atgaatgcag aagttatacc tgcagccata ttagcacctt
     2581 cattattgtg tataatttga atattatttg cttttaaagt atgtccaatt aagtttgaag
     2641 tcgttgtttt accatttgtt ccactgataa atacaatatc atcaacttgc tctgctaatt
     2701 ttcttaatat atctgtatcc acttttctag cgatttgtcc aggtaaatct gttcctcttt
     2761 tacctactgc tctacttgct ttacgcgcca atttcgctag atggattgcc gtccactgtc
     2821 tcatgtgttt cctcctcaaa tttccactcg catcattata acatgacaag gcaacttcaa
     2881 aaaagtttct caatcacaaa ttgatacagt gtttctaaat tataatcatt ctcatttaga
     2941 taattaaaaa tgatatttat tctcaattaa atatcgctaa atgatatatt ttctcaatta
     3001 gagtgctaaa ataaggtgtt aaattataat tattattatt tacaattgag aatgagtttg
     3061 ttatactaag tttaattcat agtaatttta atttacaaat aagaggtgta tcaaaatgtt
     3121 aagtaaaaat ttattagaag cattaaatga tcaaatgaac catgagtact ttgcagcaca
     3181 cgcatatatg gcaatggcag catactgtga taaagaatcg tacgaaggat ttgcaaactt
     3241 cttcattcaa caagctaaag aagaacgttt ccatggacaa aagatttata actatattaa
     3301 cgacagaggt gcacatgcag aattcagagc agtttcagca ccaaaaattg acttttcaag
     3361 catactagaa actttcaaag acagcttatc tcaagaacaa gaagtaacaa gacgtttcta
     3421 taacttatct gaaatcgctc gtcaagataa agattatgca actatctcat tcttaaactg
     3481 gttcttagat gaacaagtcg aagaagaatc aatgtttgaa actcacatca attatttaac
     3541 tcgtatcggc gatgacagca atgcattata tctttacgaa aaagaacttg gcgctcgtac
     3601 attcgacgaa gaataattaa acatcactac aatagacaga taaatatcat acgacatgat
     3661 aggcatttgg gtcacttaca ataacccaat gtctatatta ttttgcttta cggagatcac
     3721 tagattcatt ttctgaatca ttgatctgcg ttttttcatt ttcaaggcta attattgtat
     3781 ttttagtcat ttatttttta aactactaat gttaataact ctaaatttga tgttgaatta
     3841 atttgaccga ttttaaagca tatcatcatt tactttttaa tcagagttac atccaaatga
     3901 tagatttcac gttatacctt cacgtataat attatgtatc gtttgtaagc aaatgactaa
     3961 aagtctatta atatatacat ttaattaatt gaaaggattg actacatgat acaagatgcg
     4021 tttgttgcac ttgattttga aacagcaaat ggtaaacgta caagtatttg ttctgtcgga
     4081 atggttaaag tcattgatag tcaaataaca gaaacatttc atactcttgt gaatccgcaa
     4141 gactattttt cacaacaaaa tattaaagtt catggcatac aaccagaaga tgttgaaaat
     4201 gcacctacgt ttgactacgt atttccatat atgatgcaat ttattgcaga tttacctgtt
     4261 gtcgcacata acgcggcatt tgatatgaac gtcttacatc aaagcattca aaatattggt
     4321 ttaccaactc caaatttaac ttacttttgt agttatcaac ttgctaaaag aaccgttgat
     4381 tcgtatcgat acggtttaaa acatatgatg gagttttatc aattagattt tcatggtcat
     4441 catgatgcat tgaatgatgc caaagcatgc gcaatgatta cttttaggct actgaaaaat
     4501 tatgaaaatt taacatatgt aactaatatt tatggtaaaa atctaaaaga taaaggctag
     4561 gactaaataa aatactccct tcaaaagtaa gcattgtaaa aatgtaaact ttgcagggag
     4621 ctttatttta tataaagtca tatatcgtca tatttttata agttgattgt tctaaattac
     4681 ctacagtgac accaataagt cgaattggta catctgggtc ttttaaatcg ttataaagta
     4741 aatatgcaat attataaata tcttcttcag aactaaccga atctcttaaa ctcatctgtt
     4801 tagatagcgt ttcaaattga taagttttaa ttttaaccgt tacagtttta gctgacttct
     4861 gtaatttatt tagacgttca gctgttttac ctgacaattc ccatactttt cttaaaatct
     4921 cttcatcatc attcacgtct gttgcaaatg tgcgttcagt ccctactgat tttcttactc
     4981 ttgatgattt cacttcacta tggtcaatac cgcgtgcctt gttatataaa ccccgacctc
     5041 tttttccaaa caaacgtatt aattcaaatt ccgttttctc atataaatct ctaccgttaa
     5101 aaataccatt atcatgcatt acttttttgg aagctttacc tacgcctgga aaatctccaa
     5161 tatccaatgt catcaaaata tcatggacat tttgataatc aatcacagtc aaaccatcag
     5221 gtttattcat accactcgct aatttagcta aaaatttgtt ataagaaaca cctgcagatg
     5281 ctgttaaatg tgtctgctct agaatatctt ttctaatata ctgagcaatt ttcgaagcag
     5341 gaaggtctgg tctcactaat tctgtaatat ctaaatacgc ttcatccaat gacatcggtt
     5401 ctaccttatc tgtataactt cggaaaatag acataatctg cgcagatgtt tctcggtaag
     5461 caccaaaatt acttgtgaca aagtatccat ttggacataa tttatgcgct tgtgacatag
     5521 gcattgctga atggacgccg tattttcgtg cttcatagga tgccgtagag acaacacccc
     5581 tactgcttgc tttaccacca acaatgactg gtttcccttt caatttgggg ttatctctca
     5641 tttcgacttg tgcaaaaaaa tagtccatat ctatatgaat aattcgtctc tcagtcaagt
     5701 gctcacctcc ctactaattt ttacttttat aacgcacaaa aatatctcaa cataattata
     5761 cgctgtgtac gattttttta cataaatctt gcacttagcg ataactatat tgagataact
     5821 acaagttgtt ataaaatcaa ttgctattta agcatgatga tgaagacgat tgagtaagaa
     5881 aacataggta atctgaaata attcaagcaa attcattttg ttggtatcat catattaaaa
     5941 tttattattg agtcggcttt tgatgataca aataaatact atcttcatct tgttgaacat
     6001 atttaaaact actagatatt gttaatgcaa caagcagaat atctataaag caataagcag
     6061 tatgcatact aaacataaaa ataagtgatg aataaccaaa taccttaatt aaaataagca
     6121 agccagtact taataggaat agtggtgaca gcataataat tgagaattgc catttgttga
     6181 agcaagcatc tgctgtttgg aataagattc tgtctttttt tatattaaac ataggtttgc
     6241 tatctttttt aaataaaaga aataatgctc tatggataag ttcatgtaaa atcaataaaa
     6301 taatgaatcc agcaaaccca tatacaagat tgatgatgat attttgatcg acaaccgctg
     6361 tgacacctaa cgcccactta tacgtaaata aaatcacgaa taacgcaata acaagttgca
     6421 agataataaa ccttcgcatt tgaaaattat ttgtcgttaa atcaatttta tgcattacca
     6481 accctcccga tcatgacatt cttattcttc tttaaatata gtatacaatg tcacatttaa
     6541 tttaaaaagt tcatatcaag aaagtaaatt ggctgtaata aaattttaat gtacgacttc
     6601 tttcttcact tattaaggcg aaattttatc tcaaatcatg tgcgctattt caaattgaat
     6661 aatgccactg tctcaacatg tgttgtttgt ggaaacatat ctaccggtgt tacctcttca
     6721 agttgatatt tttcagctaa taataatgca tcacgttgct gtgttgcggg attacatgaa
     6781 atatagacaa tacgcttagg ttctaatgta agcaaagtct gaataaacgt ttcgtcacag
     6841 ccctttcttg gcggatcaac cattacaaca tctggtttaa tcccttgtgc tttccattgt
     6901 aaaataactt cttcagcttt cccacagaca aaagttgtat tattgcattg gtttatagtc
     6961 gcattttgtt gtgcgtcttc aattgcagaa ggtactactt caacaccgta tacatgtttt
     7021 gcatgtggtg ccatatatag ccctattgtt ccaataccac aataggtatc taatacaact
     7081 tcattacctg tcaattgcgc atactcaatt gctttattat ataatttctc tgtttgttca
     7141 gaattaattt ggtagaatga ctgatcactt attttaaatg tactatctgt taattgatca
     7201 ataattgtat ctttaccata tagcgttata gactgacgtc ccataataac attagagtgg
     7261 ctatcattaa tgttttgttt aatgcttgtc acattaggaa atgcatctaa tatcttctca
     7321 acaacagcat ttttttgtgg ccacttttta ccattagtta caaaaataat catcatttcg
     7381 tctgtatgat atcctgttct tacaaccaaa tgtctcatta aacctttttt caattgttct
     7441 tgataaatac ttacatttaa atcttttaaa atagatttaa cttcattcat cacttcttga
     7501 tgttgtgaat cttgtattaa acaactttcc atgtcaataa tgtcatggct tctttgacga
     7561 taaaagccca taataacttc attctgttca ttcttaccaa ctggaatctg ggacttgttt
     7621 cgatatcgcc aaggatctgt catgccaact gtatcgttaa acttagaatt atcaaaatgc
     7681 gcttttcgct gaaacaaatt aatcacttgt tcctttttca tttcaagttg tgcttcgtat
     7741 gataaatgtt gaagttggca cccaccacaa cgttcataat atatacatgg cggtgcaaca
     7801 cgattctcac ttctcgtatt tatattaagc aacttaccta tcgcaaagtt cttttttact
     7861 ttgataattt tatattcaat ttgttcatta attaaagctt gtggtatgaa aataggaaag
     7921 cgatctattt ttacaacacc atggccttca tgcgttaaat caacaactgt tcccattttt
     7981 atgtcatttt tagctattgc ttgcaaaatt ttacctccaa aatgaacagg ttaggaacaa
     8041 aattatgcgc ttcctaacct gccattatat atttcactat ttctgtttat tcttcgatta
     8101 aattgtcatc aacatgatca ttatttatta actcttcatt tacaatatca ttaggtgcaa
     8161 agacatctat atgacgttct agatttaaga aattcgctgg taatttacca ccatattctc
     8221 catctacatt tagttgtaag tctgtgaatg atgaaatatt aattgccttt gctttttcat
     8281 aaataacttt aggatgctta gtatgttctc ctcttgaagc taaagtcata atatgaccaa
     8341 gttctgcaag gtttgatttt tcaactataa ttaacgtaaa atagccgtca tctaacttag
     8401 cgtccggcac taatttttca aatcctgcca ttgaatttgt taaacctaaa aagaataata
     8461 atgcttctcc ttggaaaaca ttaccatcat attcaattct taaatctaca gctttcattt
     8521 gaggtaacat ttcgaaacct ttgatgtaat aagcaaatgg accaacaata gatttcaatt
     8581 tactcggtgt ttcataagag acttgcgtca attgtccgcc tgcagctaaa ttaataaagt
     8641 atcgattatt cattttacca atatctactt tagtagaatg accttcaatg atgacatcaa
     8701 gtgcccccat gatgtcatta ggtatatgca atgcacgtcc aaagtcatta acagtaccca
     8761 taggaatgac acctaactta ggacgattag gcttttctgc gataccatta actacttcat
     8821 ttaatgttcc gtcaccacct gcagcgatta atacatcata attttcatgc atagctcttt
     8881 ctgcttcaag tgtggcatca cctattttct cggttgcata tgcactcgtt tcatatcccg
     8941 ctttttctaa ttttattaag gcatcaggta attctctttt aaatagctct ttacctgatg
     9001 tcgggttata aatgattcta gcacgtttcc tcatatctta tccctctact taaaattcat
     9061 atattttaac ttcatcttgg tttcgtctaa tagggagtgg gacagaaata atatttaaca
     9121 aaatttattt cgttctaccc caacttacat tgtctgtaga atttcctttc gaaattctct
     9181 ttgttgaggg ccccacccca acttgcacat tattgtaagc tgacagaaag tcagcttcta
     9241 tgttggggcc ccgccccaac ttgcattgtc tgtagaattt cctttcgaaa ttctctttgt
     9301 tggggccccg ccaacttgca ttgtctgtag aattttcttt cgaaattctc tttgttgggg
     9361 ccccactaga attgaaaaaa gcttgttaca agcgtatttt ctttcagtca actactgcca
     9421 atataacatt gtagtgccta ggacattgaa tttatgaccc aggctcagtc ttatttcatc
     9481 attcttaata tcgttaaaga ccaacttgta tcttaaacaa atactatctc aatatgtaca
     9541 aaggttgtta tttattcagc attttttgcc gttcttcgtt atatagactt cgtcagttat
     9601 gctattttac ctttaaaatg atgttgtaaa tataatgttg tctttataca aaaatgtttt
     9661 ataccttttt attatacagt ttgccttaat ataattaaag ctaacgcatt aataaaatta
     9721 atatttttac cattaacatg tacaatgaat aaagttaaaa gtaatatgac ttctatagat
     9781 ataaataaac cctcgattgc atctaagtca gcaatcaagg gtatattttt taaatcttca
     9841 tagtttgatg atttaaatta tcttttatct aattcttgtt ttaatagttg atttactaat
     9901 tgtggattag cttgaccttt agacgctttc ataatttgac caactaagaa gcccatagct
     9961 ttgcctttac catttttgta atcttcaact gattgttcgt tattgtctaa tgcttcattt
    10021 acaaatttta gaagtgttgc ttcatcagaa atttgaacta agccattatc ttccataatc
    10081 tgtttagcat taccaccttt agctgctaac tctgggaaga ctttcttcgc aattttactg
    10141 ctcattgttc cgtcttcgat aagtttaatc atacctgcta aattttctgg tgttaattta
    10201 gtatctaata attctacttg atttttattt aaatattcgt ttacgccacc cattaaccag
    10261 ttagatgtta atttaacatc tgcaccgtgt tcaattgttg attcaaagaa atctgacatt
    10321 tctttagtca atgttaatac gtgtgcatcg tatgcaggta aacctaattc atttacatac
    10381 ttagctttac gctcatctgg taattcagga attgtctgac gaacacgctc tttccaagca
    10441 tcatcaatat ataaaggtac aatgtcaggc tctgggaagt aacggtaatc atcagaacct
    10501 tctttaacac gcattaaaat tgttttacct gtagattcat caaatcgacg tgtttcttgt
    10561 ccgatttctc caccatttaa caattcttct tcttggcgtt tttcttcata ttctaaacct
    10621 ttacgtacat agttaaatga gtttaagttt ttcaattcgg ctttagtacc aaatttttct
    10681 tgaccatatg gacgcaaaga gatgttagca tcacaacgta aagatccctc ttccatctta
    10741 acgtctgata caccagtgta ttgaataatt gaacgtaatt tttctaaata tgcatatgct
    10801 tctttaggtg aacgaatatc tggttcagat acgatttcaa ttagcggtgt accttgacgg
    10861 ttcaagtcaa ctaatgaata ctcaccttta tgtgttgact taccagcatc ttcttccatg
    10921 tgaagacgag taataccgat tcgttttgtt tcaccgtcga cttcgatatc gatatatcca
    10981 ttttcaccaa ttggttgatc aaattgagaa atttgatatg cctttggatt atctggatag
    11041 aaatagtttt tacggtcaaa cttagattct gttgcgattt ccatatttag tgccattgca
    11101 gcacgcattg cccagtctac tgcacgctta ttaacaactg gtaagacacc tggatatgct
    11161 aagtcgataa catttgtatt tgagttaggt tctgctccaa aatgcgctgg tgatggagaa
    11221 aacatttttg agtccgtttt taactctacg tgaacttcaa gtcctataac tgtttcaaaa
    11281 tgcatgattt ccactcctta taatttttca taaacgtcat gtaaattgta ttgtgtttca
    11341 tattgataag cgacacgata taacgttttt tcatcgaatg gtttaccaat gaactgtaaa
    11401 ccgattggtc ggccatttga ttgtccacaa ggaacagaaa taccaggtaa tccagctaag
    11461 tttactggtg ttgttaataa atcattggca tacattgtta atggatcatc aatttcttca
    11521 cctaaattaa acgcagttgt aggcgctgtt ggaccaacta ctacatcata attttcgaat
    11581 actttatcaa agtcattttt aatcaatgtt ctaacttttt gagatttttt atagtaagca
    11641 tcgtagtaac ctgaacttaa tgcaaatgta cctaagaaaa tacgacgttt tacttcttta
    11701 ccgaaacctt cagatctcga cattttatat aattcttcta atgaatgagc ttctttagaa
    11761 tgataaccat aacgaattcc gtcaaaacga gaaaggtttg acgaagcttc tgatgatgca
    11821 atcacgtaat atgatggaat accaaattta gtatttggca atgatacttc ctcaacgaca
    11881 gcacctaaag attttaaagt ttctacagcg ttttgaactg cttcttttac gtcatcagct
    11941 acaccttcac ctaagtattc tttaggtaat gcaactttta atcctttaat atctttacca
    12001 atttcagatg taaagtctac atcatcaaca ggtgcacttg tagagtcatt agcatctgca
    12061 ccagaaatag cttctaatac gattgcatta tcttttacat ttcgagtcaa tggaccaatt
    12121 tggtctaatg aagatgcaaa tgcaactaat ccaaatcgag atacacgacc gtatgttggt
    12181 ttcataccga caacgccaca atatgcagcc ggttgtctaa ttgaaccacc tgtgtctgaa
    12241 cctaagctaa atggtactaa gccagctgca actgctgctg cagatccacc tgatgaacca
    12301 cctggtactg ctttatggtc aaatggatta actgtttttt tgaaataaga tgtttctgtt
    12361 gaaccgccca ttgcaaactc atccatattt aatttaccga ttaaaacggc attctcatta
    12421 tgtagttttt ccattacagt agattcgtaa attggcacaa aaccttctaa cattttactt
    12481 gcacatgttg tttctaatcc gtttgtaata atgttatctt ttatacccat tggaatacca
    12541 aataatttgc catccatttg gtcttttgct tgtaattcat ccaattcttg cgctttttta
    12601 attgcatttt ctttatccag cgctagaaaa gacttgattg ttggatcagt ctcttcaatt
    12661 gcatcatata tatctttaac aacatcagat ggtttgattt ttttgtcttt tattaaagtt
    12721 aataaattct caaccgattc gtagcgaatg ctcatcttac gcgtcctcct cattcatgat
    12781 tgtaggcact ttaaattgtc catcttctgt ttctttggca tttttcaaag ctaattcttg
    12841 cggaatacct ttaattgctt tatcttcacg taaaacgttt tgtaaatcta aaacgtgata
    12901 tgtaggttca acgccttctg tatcagcgct atcattttgt tttgcaaaat ctaaaatgct
    12961 ttctaatgtg ttggccattt cttccgtttc ttcaggagaa atttgaagtc ttgcaagatt
    13021 cgcgatatgc tcaacttctt cacgtgttac ttttgtcatt aataaaagcc tcctttaagt
    13081 cattcatcac taaattgtat caaatttcca attaaaaatc taagtattta tgaggtacta
    13141 ctttaatttc atataaactg tataaacatt atcattcatt tatcaaatca ttttttataa
    13201 aaacaacacc ctttaatatt agacaaccca attcaatatt atgattatgc aattttaatt
    13261 ataaaaattt gcccatatcc aaaaaatacg aaagcgtttt ctatattgat atacaagtat
    13321 ttcaaaaaga ataaatttaa ttttcctact tttctaaaca tttatcttta tgtataatgt
    13381 tttcaagtaa ctaaattata aattaaataa agggagtgtt tatcatgctt acaatgggga
    13441 cagcattaag tcaacaagta gatgccaatt ggcaaactta tattatgatt gccgtctact
    13501 ttttgatact aatcgttatt ggcttttacg gttacaagca agcaactggt aacctaagcg
    13561 agtacatgtt aggtggacgt agtattggac cgtatattac tgcattatca gctggagctt
    13621 cagatatgag tggatggatg attatgggtc tacctggctc tgtctatagc actggtctat
    13681 cagctatgtg gattacaatc ggtttaacat taggtgctta tataaattac tttgttgttg
    13741 ctcctagact tcgtgtttat accgaattag ctggagatgc aatcacatta ccagatttct
    13801 ttaaaaatag actaaacgat aaaaataatg ttctaaagat tatttctgga ttaattatcg
    13861 ttatattctt tactttatat acacattctg gtttcgtatc tggtggtaaa ttatttgaaa
    13921 gtgcttttgg attagattat catttcggtt taatattagt tgctttcatt gtcattttct
    13981 atactttctt tggtggatat ttagctgtat caattacaga tttcttccaa ggtgtcatta
    14041 tgttaattgc gatggttatg gtccctattg ttgctatgat gaatttaaac ggctggggaa
    14101 cgtttcatga tgtagcagct atgaaaccta caaatttaaa tttatttaaa gggttatcat
    14161 ttataggaat tatctctcta ttttcatggg gattaggtta tttcggtcaa cctcatatca
    14221 ttgtaaggtt tatgtctatt aaatcacaca agatgctacc taaagctaga cgtttaggta
    14281 ttagctggat ggcagttggt ttgttaggcg ctgtggctgt tggtttaaca ggtattgcat
    14341 tcgtacctgc ttatcatatt aaactagaag atcctgagac attattcatc gtgatgagtc
    14401 aagtactctt ccatcctctt gtaggtggtt tcttacttgc tgcgattcta gctgcaatta
    14461 tgagcacgat ttcttcacaa ttacttgtaa catctagttc attaacggaa gacttttata
    14521 aattaattcg tggtgaagaa aaagctaaaa cgcaccaaaa agaatttgtt atgattggac
    14581 gtttatctgt attagcagta gcaatcgttg ctattgcaat tgcatggaat ccaaatgaca
    14641 caatactaaa cttagtaggt aatgcttggg ccggatttgg tgcatcgttc agtccacttg
    14701 tgctatttgc actttactgg aaaggtttga cacgtgccgg tgctgtaagt ggaatggttt
    14761 caggtgcctt agtcgttatc gtttggattg cgtggattaa accattggca catatcaacg
    14821 aaatattcgg cttatatgaa attattcctg gatttattgt aagtgtaatc gttacatatg
    14881 ttgtaagtaa acttactaaa aaacctggtg catttgttga aactgactta aacaaagttc
    14941 gtgacatcgt tagagaaaaa taattcataa gtcttaacaa attaaaaagg tactaatgtt
    15001 aatcaaaatt ctgactaaca ttggtacctt tttattatct ttaatttaca attaattact
    15061 ataaatgtga acttgcggtt ctttgtcatc ttttgtctta ctaattaaag ctcgtggttg
    15121 gttaccatct ttaatacgaa tttcatagtt atcgatttta tcgaaatatt tattcgcttg
    15181 ttcagtaacg tactgtgtaa taccaattgt ttcagcttgt ccatagtaat cgattggtaa
    15241 atctactact aatcgttgtg gctttttatc aacaaattta actttcccta ctgcttgtgt
    15301 gaaattagaa aaatatgatt gcaaattatc attaaattgc ttgaaattat tatttaaatt
    15361 ttcatcataa tctgctgctg ttgaagaagg taataaagct gatttttcat tgatattatg
    15421 ccattcatta agctttgttt gactcttttc tgcagtcgct tgagtgataa attcacctgg
    15481 tgtgattgaa tcttcacttg attgcttata aattgcaaaa tgaattggta tatcttttaa
    15541 atcatcattt tcacgtaacc ttgataatat ctcactagcc atttgtttac cttgcttttt
    15601 aacttcgcta tcatctagtt ttttactaaa agtcggtcca tctttttctt ttttatagta
    15661 ataaacacta ttcatagcta aaccaatcgt cataccttta atattcttac cttttgtatc
    15721 tccaccacca taaaaatctt gctctaaaat gttagataaa taggctggtg atttttctgc
    15781 aatcttttca ggatctgttt caccttcgtg tgatggatta agtcctaaat tttcattcgc
    15841 tttcttgtct tttttatctt tttcagacat tttatcgatt tcacgttttg tatacttagg
    15901 atttaaatag gcattaattg ttttcttgtc caaaaattga ccatcttgat acaaatattt
    15961 atctgttgga aatacttctt tacttaagtt caataaacca tcttcaaagt cgccgccatt
    16021 ataactattt gccatgttat cttgtaaaag tcctcttgcc tggctttctt taaatggtaa
    16081 caatgtacga tagttatcac cttgtacatt tttatccgta gcaatttctt ttacttgatt
    16141 tgaactattg ttatgttttt gattatcttt tccagcctgg tcatccttat ggttaccaca
    16201 agcagcgagt ataaagatag ctgtaatcaa taatactaat gtacgcttca tcgacatacc
    16261 cctctaacta tttaattcat tttgcttatc tacaaattgt tgctctgtcc aaatttcaat
    16321 acctaaactt tgtgcttttg ttaattttga acctgcatct tcaccagcaa taacgacatc
    16381 tgtattttta gtaacgctac ttgtaacttt agcaccttgt gatgcaagcc atttagatgc
    16441 ttcattgcgt gtcatttgat gtagcttacc agttagtact atcgttttac cactaaattc
    16501 aggatgtcct tcaatatctg atgttttgat acctttataa atcatattaa catgtttatc
    16561 ttttaatttt tgaattaaag cacgaatatc ttcattttct aagtaagtaa ctacagattg
    16621 tgctacttta tcacctatat catgaatttc tactaattcc gcttcagtta ccgttagtaa
    16681 tcgatctatc gtttcatatt tttctgctaa cacttggctc gctttaacac ctaaatgcct
    16741 aatacctaga ccaaataata aattttctaa agagttgtcc ttagcttgtt gaatggcagc
    16801 taataaatta tcaacttttt tctgccccat tctgtctaaa ggtaataaat cttcttctgt
    16861 taaatagaaa atatcagcaa catctttaat taattcactt tgataaagct gttgaataat
    16921 tttagtgcct aaaccatcaa tattcatggc ttgtcttgat acaaagtgaa tcaatccttc
    16981 aacaagttgc gcttgacatt ttggattaat gcaacgaagt gctacttcgc cttcaatacg
    17041 tactaattca tgtccacaac ttggacaatg ggttggcata tgatatgtga cagcatcctc
    17101 aggtctacgt tctggaatac tacgtacaac ttcaggtatg atgtcacctg cttttttcac
    17161 tacaacacta tcaccaattc gaatatctct gtcatgaatt aaatcctcat tgtgcaaaga
    17221 tgctcttgat acagttgtac cagctacttt tactggttct aaaatagcag taggtgtgac
    17281 tacacctgtt cgtccaatac ttaattcaat atctaataat ttagttacta cttcctcagc
    17341 tggaaattta taagcaatgg cccatctagg agatttttgt gtgaatccca tctcatcctg
    17401 ttgatctaaa tcattaacct taataacaat cccatcaata tcataaggta atgactctct
    17461 ttggcttgtc catttttcaa tatactctaa aacaccatcg atattattta cacgcgctct
    17521 atttttattc gttgtaaaac ctaatttatc taactcatct aatgcttcac tttgcgaacg
    17581 cgcattgaaa tcagtgaaat cattgacact atatataaat acgcttagct ttcgttttgc
    17641 cgttaattta gaatctaact gtcttaatga tcccgcagca gcgtttcttg gatttgcaaa
    17701 taactgctca tcattttttt ctttttcttc atttaatcgt aaaaatgaac gtctcggcat
    17761 atatgcttca ccacgaactt ctacatttaa tggttctttc attttcaaag gtatcgcatg
    17821 aattgttttt aaattttcgg taatatcttc acctgttgtt ccatcaccac gtgttaaacc
    17881 ttgaacgaag tatccatcaa catatttcaa tgatactgct aagccatcaa tttttaattc
    17941 gcacatatat tcaacgttgc caatttgttc acgtatgcgt tggtcgaatt ttctcaaatc
    18001 atcctcatta aatgcattcc ctaaacttaa cattggcgtg tcatggttga ctttattgaa
    18061 agaggcttgg gcttcaccac caactctaac tgttggagaa tctacagtct tatactcagg
    18121 atgctcctct tctattttaa tcagttcatg aagtaatttg tcatattcac tatctggtac
    18181 agatggatta tcctctacat agtattcata actgtattga tttaataaat catgtaactc
    18241 gttcacacga gacgataaat cagccatccc ttaatcctcc tttttttcaa ttggtgcaaa
    18301 ttgcgctaac aaacgttttg gcccttgtga tttaaagata atatctagtt cgattgagcc
    18361 atttttctcg tttacattac tcaccatgcc ttctccccag gctttatgca tcactttgtc
    18421 acctacattc caatcagatg acgatacttg ttttttcgtt gacgttgttc gttgactaaa
    18481 tccgcgttta gcaaaaggtt ttgccttagg ttgtatcgtt tgtcgtttgc cacttgaatg
    18541 attttctaat agtgattctg gaatttcctt taaaaatcta gatggcatat ttgactgagg
    18601 gcgaccaaat aacattcttg atgtcgcatg agtgatatat aacacctctt cagcccttgt
    18661 aattgctaca taacaaatac gacgttcttc ttgcatttcg tgatcatctt cactcttaat
    18721 cgctctaata tgtgggaata aagattcttc catccccatt ataaagacaa ttggaaattc
    18781 aaggccctta gccgagtgca ttgtcattag tgttacgcca ttttcagtat ctgcctcatc
    18841 aatatcagct actaacgata aatccgttaa aaagttaatt aatgactgtt cttctaatgg
    18901 ggtattttcc tcatagtctt ttggtactga cataaattca tcgatgtttt ctaatctact
    18961 tcgagattct aatgtatttt cacgttcaag catttctcgg tagccagact tttgtaatac
    19021 ttcgtcaact atttcatgaa tttctaaaaa ttcttgttct tttatcaagc tttggatcaa
    19081 ctcgtaaaaa ttaagacact cttgtgtcac tttttttgac aatccgataa aatcagcttc
    19141 tccaagtgca tcaaacatac tgatattgtt ttgaagtgca tagttttgaa ctttttcaac
    19201 agatgaagga cctacacctc tttttggaac attaataata cgttgcaaac taatgtcatc
    19261 attactattg gcaattatac gcaaataact taataaatct ttgatttctt tacggtcata
    19321 gaacttttgg ccaccaacca ttgtgtatgg catattagat ttcatgaatg tttcctcaag
    19381 tacacgtgat tgtgcatttg ttctatataa aattgccata tcttgatatt tcttaccatt
    19441 acgttgatgc ttcataattt ctcgtattac aaattccgct tcatcacgtt ctgtcattgc
    19501 ttcatagtaa tgaattttct caccattcgt atttgcagtc cacagtcctt ttggcttacg
    19561 ttcagaatta tttttaatca cttcgttagc cgcatttaaa atcgttttcg tcgaacgata
    19621 attttgctct aaaaagattg tattcgcttc tgggtagtct ttttcaaatg ataagatatt
    19681 ttgaatatca gcaccacgcc aaccataaat tgactgatct gagtcaccta caacacataa
    19741 gtttttaaac ttacttgcta ataatttaac taatgtatat tgtgctttat tagtatcttg
    19801 atactcatct acatgaatat attggaattt gttctgataa tattctagaa cttctggtac
    19861 acgctcaaat aagttaatcg ttgtcataat aaggtcatca aaatctaacg cttcattacg
    19921 cgacaattgg cgttgatatc cactataaac cgttgctacc atttgcgagt gataatctgt
    19981 ggcttctttt tgagcatctg caggtgtttt aagttcattt ttcaaattac tgatcgcacc
    20041 gataaacata cgaggttcaa actttttact atcaatattt tcatttttta agacgtcttt
    20101 aataacagat ttttggtctg taggatcaat tatcgtaaaa ttgcgttcta tacctattcg
    20161 atctgcatca cgacgtaaaa tacgaacaca cattgagtgg aatgttgaca tccaaataac
    20221 ttctgcttga tcacctacta atttttgaac acgttctttc atttctcttg cagctttatt
    20281 tgtaaaagta atagccaaaa cattgtatgg tgagacatct ttttcgtcta ataaataagc
    20341 aattctatgt gttaaaacac gtgtcttccc tgaaccagca cctgccataa ttaacaatgg
    20401 tccttctgtt gtctttacag cttcactttg ctctgtattc atatgattta ataacgcatt
    20461 catttactag actcctttat ttttactgtt tttaaagctt ttttaatatc tttataaata
    20521 atatcaccga cgataattgt atctgcaata gctgccatct ctgtcgcttg ttgttctgag
    20581 gaaataccgc caccataaaa aagttgcgtt tctgttagat gttctgagac agcttgaacc
    20641 tttgatacgt cgccataaat gccactatac tctatataca taaccggtaa tcgatacata
    20701 tgattgacca tttgggcata tgcttctaaa tcttctgttg ttaaatctgt atttgctttg
    20761 gtatgttttg ccactttgct atcagcattg cacacgacat acccttcaaa tattacttct
    20821 tcaaaatcta tactatgtcc atatgtttta agcgcttcta ataatatacc attgtgaaat
    20881 gcaacatctg tactgttcag tactgtaggt acaaaataaa aatcaaaacc aggcattaca
    20941 ctttcgatgt ttgatatttc aagtactaaa ggcaatgggt atcttcttac cctgctcatt
    21001 aaatgaatga cattatcttc agtaacgtca tcagttccac caatcataat tgcatctgtt
    21061 tgagacatac aaatcgcatc taaatcatca tctgaaatat gtttagctgg gtctaattta
    21121 aaaatatggc gccatttttt aatgtcatac attttccgaa actccttttt taacatacat
    21181 atgattatag catttttaag tgtcgagttc taaagactta atatgaattt taagttcttt
    21241 tactctgtaa attttttcgt gaaaaaacaa tgattatcta ccttattagt gcagatagat
    21301 aaccattgtt tatcgttcat ttattattca tttgtttcaa tattcatacg atctaaaatc
    21361 attgtataag catcattacc ccattgtaat gaacgcttca ctctagaaat cgttgcagtc
    21421 gatgctccag attcttgttc aatcgttgca taggtataac cttgcttaat cattttagca
    21481 acttgtaatc tttgagacag tgattgaatt tcatttacag tacacaaatc atcgaaaaat
    21541 tggtaacatt cttctctatt ttctaacgtt agtattgcat caaacaattc atctaacgct
    21601 gcacctcgta atttttcaat ttgcatatcg aaacaacccc tataatttta ttctttatgt
    21661 cattttaacg cattaaccta ttaaagtgta gcgatttata ttttattaaa tctgaatcgt
    21721 tactttattt aattttatgc taatccagcg cgtttgaaaa tagtgtcaac ttgattcaaa
    21781 tgatgtttag gatcgaaaca ttcatccaat tcttcttttg ttaaaacact tgtaatagac
    21841 tcatcttgtt cgattaattc acggaaaggt gttttcgttt cccaagatat catcgctttt
    21901 ggttgtactt tgtcgtatgc ttcttcacga accatacctt tattaattaa tgctaataag
    21961 acacgttgtg agaaaatcag accaaatgtt ttatctatgt tattacgcat attatcttca
    22021 aatacagtta aacggtccac aatattcgtg aaacgattca atgcataatc tagtgctatt
    22081 gtaacatctg gtaacataat acgctcagct gaagaatgag aaatatctct ttcatgccat
    22141 aatggcacat tctcataagc tgtagtaata taaccacgaa tgactcttga aatacctgtg
    22201 atattttcag agccaattgg atttcgttta tgaggcattg cagatgaacc tttttggcct
    22261 tttgcaaatg cttcttcaac ttctcttgtt tcggtttttt gaaggttacg aatttcaacg
    22321 gcaaattttt ctagtgacgt cgcgattaat gctaatgtcg caatgtagta tgcatgtcga
    22381 tcgcgttgca atgtttgcgt tgatacaggc gctgtgccaa tacctaaatg tttacacaca
    22441 taactttcta tttcaggagg aatgttagca aaagtaccta ctgcaccact cattttccct
    22501 acttcaattt cttctcttac ttgtttgaaa cgttgtaagt tacgttgcat ttccgtgtac
    22561 cacaatgcca ttttgacacc aaatgtagtt ggttctgcat gcactccatg tgtacgtccc
    22621 atcatcaatg tatatttata attttttgct ttttcagcta aaacgtcgat aaatctttct
    22681 aaatcttttt caataatgtc atttgcttgt ttaataacga aacttaaagc tgtatctaca
    22741 acatcagtag aagttaaacc ataatgtacc cacttacgtt cttcacctag cgtttcagaa
    22801 acttgtctag taaaggctac aacatcatgg cgcgtttctt gttcaatttc ttgtgcacgt
    22861 tcgacattta cctttgcgtt ttgacgaatt ttttgtacgt cagctttcgg tatatgtcct
    22921 aattcactcc atgcctcaca tgctaaaatt tccacttcta accatgcttc atagcgattt
    22981 tgatcagtcc aaatatcaga catttcttct ctagaataac gttcaatcat ttttttaact
    23041 cctatcgtat gtatactcga attttcaaaa acagaacatt tttaataaaa ataaataaaa
    23101 agttcgtttt taactctact cttcacagtt taacagaatt ggttataaat gtataaaaaa
    23161 tttccgtata ttctcattct attttatttt ttacattaat acaattatct atggcagatt
    23221 aatactgatt tctaattgta aatgttcgca acactttaat ctaactggta tttataatga
    23281 tccattaaga atataatatt gcattttaat ttttctcccc tcaactacac tatccaactt
    23341 tttattacaa ttaggacaat caatagcttt agtaatacca gattttattc actttacttc
    23401 tcctattgta tggaattttc aacaatctac tttacctagt ttcataatat tccttcttac
    23461 attccataat gccttttaaa attattcgct tctaatttaa caaattttct actcacaaaa
    23521 agaatatatg ttctattgca taggtgtagc attttaaaca taagccatta atatcgacct
    23581 ccagaatcgt ataaatacga aactgattat agaaaaatac caagaaaata tttaaaccct
    23641 aaaatccctc aagggcgtgg aaaaatcaaa tggcaagctt ttgcgactct cccgcaacag
    23701 tttgaaattt tagaacaaat tataaaggat caaaataaaa tagaaaaacc attgctaaca
    23761 catgattcat tagataattt agatcagatt tttcaaataa aaattcaaaa tgatgagtta
    23821 tgtacaatct catattggga agacggcagc atttcaaact atacaggaaa aattttgaaa
    23881 attgatacaa tcaatggtta ttttacattt tacgattcta caaatactaa acatactttt
    23941 ttcaatacta atgtgtataa tatctcttaa acttgaatta tttctcttta cctgtgtatt
    24001 aaatatc
//
LOCUS       DAKPJH010000031        23235 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.031, whole genome shotgun sequence.
ACCESSION   DAKPJH010000031 DAKPJH010000000
VERSION     DAKPJH010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23235
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.031"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            299..1210
                     /gene="rapZ"
                     /locus_tag="OY092_001058"
     CDS             299..1210
                     /gene="rapZ"
                     /locus_tag="OY092_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HCX1076013.1"
                     /translation="MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPP
                     VLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEAS
                     TEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK
                     ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDK
                     DVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERL
                     GNYLNEVFEYNVYVHHRDAHIESGEKK"
     gene            1207..2202
                     /locus_tag="OY092_001059"
     CDS             1207..2202
                     /locus_tag="OY092_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HCX1076014.1"
                     /translation="MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGK
                     IRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITN
                     DFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLE
                     PNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVM
                     TQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKA
                     ELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK"
     gene            2313..3257
                     /gene="whiA"
                     /locus_tag="OY092_001060"
     CDS             2313..3257
                     /gene="whiA"
                     /locus_tag="OY092_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HCX1076015.1"
                     /translation="MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVI
                     NVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGI
                     LKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGL
                     TKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNS
                     VNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLK
                     ELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL"
     gene            3820..4407
                     /gene="clpP"
                     /locus_tag="OY092_001061"
     CDS             3820..4407
                     /gene="clpP"
                     /locus_tag="OY092_001061"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HCX1076016.1"
                     /translation="MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSI
                     VSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSF
                     LLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQ
                     SIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK"
     gene            4589..6223
                     /locus_tag="OY092_001062"
     CDS             4589..6223
                     /locus_tag="OY092_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000675915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HCX1076017.1"
                     /translation="MKGIELLNNPFLNKGTAFTNEERKQLGLEGLLPANVRTLEQQAE
                     QCYEQFKAKQTDFEKRLFLMAIFNRNRTLFYKLTSKHLVEFMPIIYDPVIAQSIEQYN
                     ENFSRPQDAVFLSVDRQDQIEQELRNVANGRDIRLIVVTDAEGILGIGDWGVDGVDIA
                     IGKLIVYTAAAGINPSQVLPVSLDVGTNNEQLLKDDLYLGNRHKRVDDETYYAFVDKF
                     VSAVRKEYPNALLHWEDFGRGHAKNILDKYEDTLPTFNDDIQGTGIVTLAGVLGALNI
                     SKVDYTNQTFLVYGGGTAGMGITNILKDELIKQGVSEEKANQHFFIMDKQGLLFDDMD
                     DLTEAQQVFAKNRNEFSNTVNWKNLKEVIENIKPTVLIGTSTQTGAFTEDAVKEMLKH
                     TERPMIFPLSNPTKLAEATAQDLLKWTNGKALIGTGIPYNDIEYNGVNYSIGQANNAL
                     MYPGLGLGLIASKAKKVNQQILSAASHALGGMVNPDEPGAAVLPPVEKIHQCSRAIAK
                     AVAQSVIDQGLNAETIDDIDKAIEAEIWYPEYKSYI"
     gene            complement(6432..7334)
                     /locus_tag="OY092_001063"
     CDS             complement(6432..7334)
                     /locus_tag="OY092_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HCX1076018.1"
                     /translation="MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKIS
                     YVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSR
                     NKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
                     IGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESA
                     SGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPN
                     KIQALGFQFKYSNLKMALEDLISK"
     gene            8037..8666
                     /locus_tag="OY092_001064"
     CDS             8037..8666
                     /locus_tag="OY092_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4887 domain-containing protein"
                     /protein_id="HCX1076019.1"
                     /translation="MSNQNYDYNKNEDGSKKKMSTTAKVVSIATVLLLLGGLVFAIFA
                     YVDHSNKAKERMLNEQKQEQKEKRQKENAEKERKKKQQEEKEQNELDSQANQYQQLPQ
                     QNQYQYVPPQQQAPTKQRPAKEENDDKASKDESKDKDDKASQDKSDDNQKKTDDNKQP
                     AQPKPQPQQPTPKPNNNQQNNQSNQQAKPQAPQQNSQSTTNKQNNANDK"
     gene            9365..10378
                     /locus_tag="OY092_001065"
     CDS             9365..10378
                     /locus_tag="OY092_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HCX1076020.1"
                     /translation="MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHM
                     DMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIK
                     NKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAI
                     HLLPYNVFFVPARGGLGENVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLL
                     EPSVINTLDKIKQANVILHGIGDALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQ
                     GQIVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKI
                     ILE"
     gene            10431..11441
                     /gene="gap"
                     /locus_tag="OY092_001066"
     CDS             10431..11441
                     /gene="gap"
                     /locus_tag="OY092_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCX1076021.1"
                     /translation="MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHL
                     LKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTD
                     KDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVA
                     KVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIG
                     KVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTED
                     EIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAEL
                     SK"
     gene            11580..12770
                     /locus_tag="OY092_001067"
     CDS             11580..12770
                     /locus_tag="OY092_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HCX1076022.1"
                     /translation="MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTI
                     QYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEA
                     AIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHAS
                     NVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIAD
                     KIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSN
                     DAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTI
                     GVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKA
                     IDNK"
     gene            12892..13653
                     /locus_tag="OY092_001068"
     CDS             12892..13653
                     /locus_tag="OY092_001068"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HCX1076023.1"
                     /translation="MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAI
                     QLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRE
                     LFHETDKEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSENQ
                     LKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKP
                     NNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK"
     gene            13656..15173
                     /locus_tag="OY092_001069"
     CDS             13656..15173
                     /locus_tag="OY092_001069"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HCX1076024.1"
                     /translation="MAKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQ
                     IEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFENDVLNNAIA
                     HVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSA
                     LKYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKE
                     GVEASYNEGLTDEFVVPFIVENQNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGF
                     KVEQVKDLFYATFTKYNDNIDAAIVFEKVDLNNTIGEIAQNNNLTQLRIAETEKYPHV
                     TYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILN
                     FANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD
                     QPMTTHTTNPVPVIVTKEGVTLRETGRLGDLAPTLLDLLNVEQPEDMTGESLIKH"
     gene            15303..16607
                     /gene="eno"
                     /locus_tag="OY092_001070"
     CDS             15303..16607
                     /gene="eno"
                     /locus_tag="OY092_001070"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HCX1076025.1"
                     /translation="MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTG
                     EHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIALDGT
                     PNKGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQLPVPMMNIVNGGSHSDA
                     PIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTE
                     DAVETIIQAIEAAGYKPGEEVFLGFDCASSEFYENGVYDYSKFEGEHGAKRTAAEQVD
                     YLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIEN
                     GIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQ
                     IKTGSLSRTDRIAKYNQLLRIEDELFETAKYDGIKSFYNLDK"
     gene            16958..17416
                     /locus_tag="OY092_001071"
     CDS             16958..17416
                     /locus_tag="OY092_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076026.1"
                     /translation="MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLN
                     LTNQNTSDKAIDYILNSFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFT
                     LINLSITIQAIKAAHGAYLTLPILIVIIGSVALAIYMLVVSIKRKSTFNR"
     gene            17483..17716
                     /gene="secG"
                     /locus_tag="OY092_001072"
     CDS             17483..17716
                     /gene="secG"
                     /locus_tag="OY092_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HCX1076027.1"
                     /translation="MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAEQLFGK
                     QKQRGVDLFLNRLTIILSILFFVLMICISYLGM"
     gene            17832..18572
                     /locus_tag="OY092_001073"
     CDS             17832..18572
                     /locus_tag="OY092_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HCX1076028.1"
                     /translation="MQIKLPKPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYT
                     SYAPQYEGHAAPPEEILQSSPFVWFKDALDGYDYLVEQGYDEIVVAGLSLGGDFALKL
                     SLNRDVKGIVTMCAPMGGKTEGAIYEGFLEYARNFKKYEGKDQETIDNEMHHFKPTET
                     LKELSEALDTIKDQVDEVFDPILVIQAENDNMIDPQSANYIYEHVDSDDKNIKWYSES
                     GHVITIDKEKEQVFEDIYQFLESLDWSE"
     gene            18606..20978
                     /gene="rnr"
                     /locus_tag="OY092_001074"
     CDS             18606..20978
                     /gene="rnr"
                     /locus_tag="OY092_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HCX1076029.1"
                     /translation="MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLV
                     ELEQSGLIERTKTDRYQKKHSSKGHSKLIKGTLSQNKKGFAFLRPEDEDMEDIFIPPT
                     KINRALDGDTVIVEIHQSKGEHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDD
                     KRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSI
                     IYQHGIEIEFPDEVLQEAEAVPDHIENTEIKGRHDLRDELTITIDGADAKDLDDAISV
                     KKLANGNTQLTVSIADVSYYVTEDSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICS
                     LNPHVDRLTLSCRMEIDASGRVVKHEIFDSVIHSDYRMTYDAVNQIITEKDPAIREQY
                     NEITPMLDLAQDLSNRLIQMRKRRGEIDFDISEAKVLVNEDGIPTDVQLRQRGEGERL
                     IESFMLIANETVAEHFSKLDVPFIYRVHEQPKSDRLRQFFDFITNFGIMIKGTGEDIH
                     PTTLQKVQEEVEGRPEQMVISTMMLRSMQQAHYDDVNLGHFGLSAEYYTHFTSPIRRY
                     PDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELAEHTSKRERRAIEAERDTDELKKAE
                     YMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHIANMTDDYYRFEERQMALIGERQ
                     AKVFRIGDTIKVKVTHVDVDERLIDFQIVGMPLPKNDRSQRPARGKTIQAKTRGKSLD
                     KSKSDDKGHKKKGKQRKGKNERKNDKSGNSKHKPFYKDKSVKKKARRKKK"
     gene            21000..21464
                     /gene="smpB"
                     /locus_tag="OY092_001075"
     CDS             21000..21464
                     /gene="smpB"
                     /locus_tag="OY092_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HCX1076030.1"
                     /translation="MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGS
                     ANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGDQTREI
                     GYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY"
     gene            21555..21916
                     /gene="ssrA"
                     /locus_tag="OY092_001076"
     tmRNA           21555..21916
                     /gene="ssrA"
                     /locus_tag="OY092_001076"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(22393..23121)
                     /locus_tag="OY092_001077"
     CDS             complement(22393..23121)
                     /locus_tag="OY092_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
                     /protein_id="HCX1076031.1"
                     /translation="MKKVMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNE
                     ELKEFKSKKNMDIKIKGDTIVSDKFEAKIKEPFIINEKDEKKKYIAFKMEITAKKDDK
                     DLNPSSISHDYINITQDDKNTVNKLRDGYLLSDKKYKDWTEHNQDQIKKGKTAQAMFI
                     YELRGDGNINLNVHKYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEY
                     KKEQEREKEKEKHKDDDHSGLDEV"
BASE COUNT         8253 a         3382 c         4409 g         7191 t
ORIGIN      
        1 gtcccacccc aactcgcatt gcctgtagaa attggaaatc caatttctct gtgttggggc
       61 ccctgactag agttgaaaaa agcttgttgc aagcgcgttt tcattcagtc aactactagc
      121 aatataatat tatagaccct aggacattga tttatgtccc aatctccttt taaatgatgt
      181 atatttttag aaatttaatc taggcatagt taaaaataaa tataaaacat cgttgcttaa
      241 ttttgtcata gaacatttaa attaacatca tgaaattcgt tttggcggtg aaaaaataat
      301 ggataataat gaaaaagaaa aaagtaaaag tgaactatta gttgtaacag gtttatctgg
      361 cgcaggtaaa tctttggtta ttcaatgttt agaagacatg ggatattttt gtgtagataa
      421 tctaccacca gtgttattgc ctaaatttgt agagttgatg gaacaaggaa atccatcctt
      481 aagaaaagtg gcaattgcaa ttgatttaag aggtaaggaa ctatttaatt cattagttgc
      541 agtagtggat aaagttaaaa gtgaaagtga cgtcatcatt gatgttatgt ttttagaagc
      601 aagtactgaa aaattaattt caagatataa ggaaacgcgt cgtgcacatc ctttgatgga
      661 acaaggtaaa agatccttaa tcaatgcaat taatgatgag cgagagcatt tgtctcaaat
      721 tagaagtata gctaattttg ttatagatac tacaaagtta tcacctaaag aattaaaaga
      781 acgcattcgt cgatactatg aagatgaaga gtttgaaact tttacaatta atgtcacaag
      841 tttcggtttt aaacatggaa ttcagatgga tgcagattta gtatttgatg tacgattttt
      901 accaaatcca tattatgtag tagatttaag acctttaaca ggattagata aagacgttta
      961 taattatgtt atgaaatgga aagagacgga gattttcttt gaaaaattaa ctgatttgtt
     1021 agattttatg atacctgggt ataaaaaaga agggaaatct caattagtaa ttgccatcgg
     1081 ttgtacgggt ggacaacatc gatctgtagc attagcagaa cgactaggta attatctaaa
     1141 tgaagtattt gaatataatg tttatgtgca tcatagggac gcacatattg aaagtggcga
     1201 gaaaaaatga gacaaataaa agttgtactt atcggtggtg gcactggctt atcagttatg
     1261 gctaggggat taagagaatt cccaattgat attacggcga ttgtaacagt tgctgataat
     1321 ggtgggagta cagggaaaat cagagatgaa atggatatac cagcaccagg agacatcaga
     1381 aatgtgattg cagctttaag tgattctgag tcagttttaa gccaactttt tcagtatcgc
     1441 tttgaagaaa atcaaattag cggtcactca ttaggtaatt tattaatcgc aggtatgact
     1501 aatattacga atgatttcgg acatgccatt aaagcattaa gtaaaatttt aaatattaaa
     1561 ggtagagtca ttccatctac aaatacaagt gtgcaattaa atgctgttat ggaagatgga
     1621 gaaattgttt ttggagaaac aaatattcct aaaaaacata aaaaaattga tcgtgtgttt
     1681 ttagaaccta acgatgtgca accaatggaa gaagcaatcg atgctttaag ggaagcagat
     1741 ttaatcgttc ttggaccagg gtcattatat acgagcgtta tttctaactt atgtgtcaat
     1801 ggtatttcag atgcgttaat tcattctgat gcgcctaagc tatatgtttc taatgtgatg
     1861 acgcaacctg gggaaacaga tggttatagc gtgaaagatc atatcgatgc gattcataga
     1921 caagctggac aaccgtttat tgattatgtc atttgtagta cacaaacttt caatgctcaa
     1981 gttttgaaaa aatatgaaga aaaacattct aaaccagttg aagttaataa ggctgaactt
     2041 gaaaaagaaa gcataaatgt aaaaacatct tcaaatttag ttgaaatttc tgaaaatcat
     2101 ttagtaagac ataatactaa agtgttatcg acaatgattt atgatatagc tttagaatta
     2161 attagtacta ttcctttcgt accaagtgat aaacgtaaat aatatagaac gtaatcatat
     2221 tatgatatga taatagagct gtgtaaaaaa atgaaaatag acagtggttc taaggtgaat
     2281 catgttttaa ataagaaagg aatgactgta cgatgagctt tgcatcagaa atgaaaaatg
     2341 aattaactag aatagacgtc gatgaaatga atgcaaaagc agagctcagt gcactgattc
     2401 gaatgaatgg tgcacttagt ctttcaaatc aacaatttgt tataaatgtt caaacggaaa
     2461 atgcaacaac ggcaagacgt atttattcgt tgattaaacg tgtctttaat gtggaagttg
     2521 aaatattagt ccgtaaaaaa atgaagctta aaaaaaataa tatttatatt tgtcgtacaa
     2581 agatgaaagc gaaagaaatt cttgatgaat taggaatttt aaaagacggc atttttacgc
     2641 atgaaattga tcattcaatg attcaagatg atgaaatgag acgcagttac ttgagaggag
     2701 cttttctggc aggtggctca gtgaataacc ctgaaacatc ttcgtaccat ttggaaattt
     2761 tttctcaaaa tgagagtcat gcagaaggct taacgaaact aatgaatagt tatgagttga
     2821 atgccaaaca tttagagcga aaaaaaggaa gtattacgta tttaaaagaa gcggaaaaga
     2881 tttcggattt tcttagtttg ataggtggct atcaagcgtt attaaaattt gaagacgtac
     2941 gtattgtaag agatatgcgt aattctgtta accgactcgt taattgtgaa acggcaaatc
     3001 taaataaaac agttagtgct gcgatgaaac aagttgagag cattaaattg attgataaag
     3061 aaattggtat tgaaaattta ccagacaggt tgagagagat tgctagaatt cgagtagaac
     3121 atcaagaaat ttcgttgaaa gagcttggag aaatggtatc aactggtcca atttcaaaat
     3181 caggtgtaaa tcaccgatta agaaaactta atgatttagc cgataagatt agaaatggtg
     3241 aacaaataga attataagta agaaggtgtt tttggtagtg aattatcaaa aacacttttt
     3301 tatgattaaa aagtgtttaa tgaataatag tcgactaact attaaattga gctggaaagt
     3361 ttaatgaagg aaattcaata accaagtgat gcctaatttt ctcattaaat agcatcatat
     3421 gtatcaattt ggtcataaga aaatatgaat gtgataatta attgagtccc tgatcataga
     3481 caaaaacaaa atcagcataa ataagaatcc cgacattgcg ggattctcag tattgaaaag
     3541 tattgtattt tattaaaaca gcctccttga agggaattga acccctatct taagaaccgg
     3601 aatcttacgt gttatccatt acaccacaag gagcaaatat gtaatcatat ctctgtacta
     3661 tgagaagtaa aataagtaca atctaaaata gatattatca gtttacaaag gaaagagaaa
     3721 agcgtcaaac aatgtaacta tttaaagtca aagtgtttga ccaaatttga cttaatatgt
     3781 aaaataatga gtaacagtta ttacaaggag gaaatataga tgaatttaat tcctacagtt
     3841 attgaaacaa caaaccgcgg tgaacgtgca tatgatatat actcacgttt attaaaagac
     3901 cgtattatta tgttaggttc acaaattgat gacaacgtag caaattcaat cgtatcacag
     3961 ttattattct tacaagcgca agactcagag aaagatattt atttatacat taattcacca
     4021 ggtggaagtg taacagctgg ttttgcgatt tatgatacaa ttcaacacat taaacctgat
     4081 gttcaaacaa tttgtatcgg tatggctgca tcaatgggat cattcttatt agcagctggt
     4141 gcaaaaggta aacgtttcgc gttaccaaat gcagaagtaa tgattcacca accattaggt
     4201 ggtgctcaag gacaagcaac tgaaatcgaa attgctgcaa atcacatttt aaaaacacgt
     4261 gaaaaattaa accgcatttt atcagagcgt actggtcaaa gtattgaaaa aatacaaaaa
     4321 gacacagatc gtgataactt cttaactgca gaagaagcta aagaatatgg cttaattgat
     4381 gaagtgatgg tacctgaaac aaaataattc aaagtaaaga gtagactaag cagtctgctc
     4441 tttttgtatg agtaaaccaa ggcatcaata aattgtttaa aatattttga gtaaaagcaa
     4501 aaaataacgg gtaaaaatat ttgtgagaat ttaattagac acgttgtttc tgcggttcta
     4561 caatctaaca aatataaagg atgattttat gaaaggcatt gaattactta acaatccatt
     4621 tttaaacaaa ggtacagctt ttactaacga agaaagaaaa cagttagggc ttgaaggttt
     4681 attacctgcg aatgttcgaa ctttagaaca acaagcagaa caatgttatg aacaattcaa
     4741 ggcgaaacaa accgattttg agaaacgttt atttttaatg gcaattttta atcgtaatcg
     4801 tacattgttt tacaaattga cttcaaagca tttagttgaa tttatgccaa ttatttatga
     4861 ccctgttatt gctcaatcga ttgaacaata taatgagaac ttcagcagac cccaagatgc
     4921 agtattttta tctgttgata gacaagacca aattgaacaa gaattgcgca acgttgcaaa
     4981 tggcagagat attcgattaa ttgtagtgac agatgcggaa ggtatattag gtatcggcga
     5041 ttggggtgtt gatggtgtag atattgcgat aggaaaatta atagtatata cagcagcagc
     5101 tggaataaat ccttcacaag tactacctgt atctttagat gtaggtacta ataatgaaca
     5161 attactaaag gatgaccttt atttaggaaa tcgtcataaa cgtgtcgatg atgagacata
     5221 ttacgcattt gtagataaat ttgtgagtgc agtgcgtaaa gaatatccta atgcactatt
     5281 acattgggaa gattttggta gagggcatgc caaaaatatt ttagataaat atgaagatac
     5341 gttaccaact tttaatgatg atattcaagg tacaggtata gttacattag ctggcgtact
     5401 aggtgcatta aatatttcta aagtagatta tacgaatcag acgtttttag tttatggtgg
     5461 tggtacagct ggtatgggta ttaccaatat tttaaaagat gaactaatta aacagggtgt
     5521 ttcagaagaa aaagcaaatc agcatttctt cattatggat aaacagggat tgttgtttga
     5581 tgatatggat gatttaactg aagcgcaaca agtatttgct aaaaatagga atgaattttc
     5641 aaatacagta aactggaaaa atttaaaaga agtaattgaa aatattaagc ctactgtttt
     5701 aatcggtaca tcaactcaga caggtgcatt tacagaagat gcagtaaaag agatgttaaa
     5761 acatacagaa cgtccaatga ttttcccatt gtctaatcct acaaaattag cagaagcaac
     5821 tgcacaagat ttattaaaat ggactaacgg aaaagcatta attggaactg gtatcccata
     5881 taatgacatt gaatacaatg gtgtgaatta cagtattggt caagcaaata atgcattgat
     5941 gtatcctggt ttaggtttgg gacttattgc gtcaaaagcg aagaaagtaa atcaacagat
     6001 tctatcagct gcgagtcatg cacttggtgg catggtcaat ccagatgaac caggtgctgc
     6061 agtcttacca cctgtcgaga aaatacatca atgttctcgt gccatagcca aagcggttgc
     6121 acaaagtgtc attgatcaag gattaaacgc tgaaactatt gatgatattg acaaagcaat
     6181 tgaagctgaa atttggtatc ctgaatacaa atcatacatt taattttata aagtagtaaa
     6241 aggtcatttg aatattttgt ttcaagtggc cttttcgtat ttactttaaa attaatcaac
     6301 caatattcat aagtgacttt aaagttatat ctatatgtaa tatcagcaaa tagaaaagtc
     6361 tagagagatt taacgaatta tctcctagac tttttgcttg aagtggagta ggagagagat
     6421 caatgtccca ctcacttact aattaaatct tcaagtgcca tttttaaatt actatattta
     6481 aattggaatc ccaatgcttg aattttatta ggtaatactt tttgagtatc caatactact
     6541 gttgacattt gaccaagtat gagacgcatt gcaagacttg gtgcccaagt ttcatgaggc
     6601 ttatgcatag ctcttgctaa agtgtagcca aataaatttt gacgctcagg tataggtgca
     6661 gttaaattaa acggaccact agctgactcg ttatttatta aaaataaaat agcttgaatt
     6721 aaatcattga tatgaatcca tgaataccat tgttgaccag aacctaattt accaccaatg
     6781 taatattcgt atggcagttt cattgtttgt aacgcaccgc cttcattcga taaaattata
     6841 ccgaaacgac cgatgacaac tcgtgtacct aattgttcaa attgttgtgc gaaacgttcc
     6901 cattgataca caatatctga taagaaatca aaaggtaaag ttttataaac ttctgtgtaa
     6961 ctcataaata aatcaggagg atagtaacca gtggcactag cattaaataa aactttaggt
     7021 gctttattac gtgatttaaa caattcatat aaagcttgcg tagattgaat tctacttagc
     7081 attagcgttt gtttatattc cggtgtccat cgtttattca atgtagcacc tgctaagttg
     7141 atgaccacat cgatattttg aggaactttg tgttcccacc cagatttagc ccagttgaca
     7201 tatgaaattt tcttatcatt tgaaatttgg tcgtgtcgcg ttaatatcgt gatatgtgaa
     7261 tctgattttt taatttcatt aactaattga gatccaacca taccagtccc accagtaatt
     7321 aagtattgtt tcattatcat tcaccccatg taattttgta tttagttact atttaataat
     7381 cattattgtt gttcaaaggt tatacattat ttagacaata atatgtcaat aacttttttt
     7441 gaattgtatt ttaataaaaa tgatataagt tataataaag gtgtaccttc gataacgaat
     7501 aaacatctct taaaagtatg tgtaaaacgc tgcatgatac aaacgaaggt aaaaatttga
     7561 ctccctttag tagtggaccc gtacgtttat cgtgcgggtc gtttttattt atttcttatt
     7621 cccattatac atcaatttaa agcattaatt ttttaaacaa atttaagaat acatagtaat
     7681 ataacaatct aaacataaaa acttttaacc caacgcttaa actaatgctt taattttcaa
     7741 tacgtagcta taatttgttg taaaatcaaa aaggttaata tgttaatttt caaaaaaagg
     7801 ctcaaaatat gtttgattta gttattaaat gttaagatat ataagactac tatttctttg
     7861 taaaaatgaa tccgatttac gagtgagtaa tagtgaaggc agttttaagt tgaagaaggc
     7921 aaaaagagta aatgtttatt aatatttgta gaaactaggt aaacaaatta gttgtgaaaa
     7981 tgttaatggt tgcgtgataa tttctatatt taaattagtt tgaagtgagg gagagtatgt
     8041 cgaatcaaaa ttacgactac aataaaaatg aagatggaag taagaagaaa atgagtacaa
     8101 cagcgaaagt agttagcatt gcgacggtat tgctattact cggaggatta gtatttgcaa
     8161 tttttgcata tgtagatcat tcgaataaag ctaaagaacg tatgttgaac gaacaaaagc
     8221 aggaacaaaa agaaaagcgt caaaaagaaa atgcagaaaa agagagaaag aaaaagcaac
     8281 aagaggaaaa agagcagaat gagctagatt cacaagcaaa ccaatatcag caattgccac
     8341 agcagaatca atatcaatat gtgccacctc agcaacaagc acctacaaag caacgtcctg
     8401 ctaaagaaga gaatgatgat aaagcatcaa aggatgagtc gaaagataag gatgacaaag
     8461 catctcaaga taaatcagat gataatcaga agaaaactga tgataataaa caaccagctc
     8521 agcctaaacc acagccgcaa caaccaacac caaagccaaa taataatcaa caaaacaatc
     8581 aatcaaatca acaagcaaaa ccacaagcac cacaacaaaa tagccaatca acaacaaata
     8641 aacaaaataa tgctaatgat aagtagtatt tagtcaaaca aaaatgaacc agtatgacag
     8701 acaacacaat taattaggtt gtctcgaata ttggttctta tttttataat tgttaattag
     8761 gggagagatg atacttaaat agttagttgt ttattttgaa gatagtgaaa tttattttga
     8821 gtgaggtggg acagaaatga tattttcgca aaatttattt cgtcgtccca ccccaacttc
     8881 cattgcctgt agaaattgga aatccaattt ctctatgttg gggcccaccc caacttgcac
     8941 attattgtaa gctgactttc cgccagcttc tatgttgggg cccctgactt taattgaaaa
     9001 atgcttgtta caagtgcatt ttcgttcggt caactactac taatgtaact ttttggattc
     9061 tagagcattg atttatgtct tagttcaaat aataagcaaa tgattagcga gtcagtataa
     9121 gggtatacat ttgactacag cgaataaaat aaaacgtttt gttgaataac aaatcgaaaa
     9181 tgtattgcaa gcgctttatc aaattattta gaaaatttaa gttttatgct tgcaattttt
     9241 gaaatagaat agtactattg caagtgtaaa gaggttaatt tttgtcccac gcgggactta
     9301 aaaaggcaac cactggttgt gacatatcct tatttacatt tataaatata aggaggaggt
     9361 agtagtgaaa gacttattgc aagcacagca aaagcttata ccggatctca tagataaaat
     9421 gtataaacgt ttttctattc ttactactat ctcaaaaaat cagcctgtcg gacgtcgaag
     9481 tttaagcgaa catatggata tgactgaacg tgtactgcgt tctgaaacag atatgcttaa
     9541 gaaacaagat ttgataaaag ttaagcctac cggaatggaa attacagctg aaggtgagca
     9601 actgatttcg caattgaaag gttactttga tatctatgca gatgataatc gtctgtcaga
     9661 aggtattaag aataaatttc aaattaagga agttcatgtt gttcctggtg atgctgataa
     9721 tagtcaatct gttaaaacag aattaggtag acaagcaggt caattacttg aaggcatatt
     9781 acaagaagac gcgatagttg ctgtaactgg cggatccacg atggcatgtg ttagtgaagc
     9841 aattcattta ttaccatata atgtattctt cgtaccagcc agaggtggac taggcgaaaa
     9901 tgttgtcttt caggcaaaca caattgcagc cagtatggca caacaagctg gcggttatta
     9961 tacgacgatg tatgtacctg ataatgtcag tgaaacaaca tataacacat tgttgttaga
    10021 gccatcagtc ataaacactt tagacaaaat taaacaagca aacgttatat tacacggcat
    10081 tggtgatgcg ctgaagatgg cgcatcgacg tcaatcacct gaaaaggtca ttgaacaact
    10141 tcaacatcat caagctgtcg gagaggcatt tggttattat tttgatacac aaggtcaaat
    10201 tgtccataag gttaaaacaa ttggacttca attagaagac cttgaatcaa aagactttat
    10261 ttttgcagtt gcaggaggca aatcgaaagg tgaagcaatt aaagcatact tgacgattgc
    10321 acccaagaat acagtgttaa tcactgatga agccgcagca aagataatac ttgaataaga
    10381 gataaaaagt ttaatacttt ttaaatatca ttttaaagga ggccattata atggcagtaa
    10441 aagtagcaat taatggtttt ggtagaattg gtcgtttagc attcagaaga attcaagaag
    10501 tagaaggtct tgaagttgta gcagtaaacg acttaacaga tgacgacatg ttagcgcatt
    10561 tattaaaata tgacactatg caaggtcgtt tcacaggtga agtagaggta gttgatggtg
    10621 gtttccgcgt aaatggtaaa gaagttaaat cattcagtga accagatgca agcaaattac
    10681 cttggaaaga cttaaatatc gatgtagtat tagaatgtac tggtttctac actgataaag
    10741 ataaagcaca agctcatatt gaagcaggcg ctaaaaaagt attaatctca gcaccagcta
    10801 ctggtgactt aaaaacaatc gtattcaaca ctaaccacca agagttagac ggttctgaaa
    10861 cagttgtttc aggtgcttca tgtactacaa actcattagc accagttgct aaagttttaa
    10921 acgatgactt tggtttagtt gaaggtttaa tgactacaat tcacgcttac acaggtgatc
    10981 aaaatacaca agacgcacct cacagaaaag gtgacaaacg tcgtgctcgt gcagcggcag
    11041 aaaacatcat ccctaactca acaggtgctg ctaaagctat cggtaaagtt attcctgaaa
    11101 tcgatggtaa attagatggt ggtgcacaac gtgttcctgt agctacaggt tcattaactg
    11161 aattaacagt agtattagaa aaacaagacg taacagttga acaagttaac gaagctatga
    11221 aaaatgcttc aaacgaatca ttcggttaca ctgaagacga aatcgtttct tcagacgttg
    11281 taggtatgac ttacggttca ttattcgacg ctacacaaac tcgtgtaatg tcagttggcg
    11341 accgtcaatt agttaaagtt gcagcttggt atgataacga aatgtcatat actgcacaat
    11401 tagttcgtac attagcatac ttagctgaac tttctaaata attttagtat agtttttatt
    11461 caaatacgct agtgctcaga actatttagc attaattaaa gcttatgagt aagcggggag
    11521 cacaaacgct tctccgctta tttttatata aaatttccta attacaagga ggaaacacca
    11581 tggctaaaaa aattgtttct gatttagatc ttaaaggtaa aacagtccta gtacgtgctg
    11641 attttaacgt acctttaaaa gacggtgaaa ttactaatga caaccgtatc gttcaagctt
    11701 tacctacaat tcaatacatc atcgaacaag gtggtaaaat cgtactattt tcacatttag
    11761 gtaaagtaaa agaagaaagt gataaagcaa aattaacttt acgcccagtt gctgaagact
    11821 tatctaagaa attagataaa gaagttgttt tcgtaccaga aacacgcggc gaaaaacttg
    11881 aagctgctat taaagacctt aaagaaggcg acgtattatt agttgaaaat acacgttatg
    11941 aagatttaga cggtaaaaaa gaatctaaaa atgatccaga attaggtaaa tactgggcat
    12001 ctttaggtga tgtgtttgta aatgatgctt ttggtactgc gcatcgtgag catgcatcta
    12061 atgttggtat ttctacacat ttagaaactg cagctggatt cttaatggat aaagaaatta
    12121 agtttatcgg tggcgtagtt aacgatccac ataaaccagt tgttgctatt ttaggtggag
    12181 caaaagtatc tgacaaaatt aatgtcatca aaaacttagt taacatagct gataaaatta
    12241 tcatcggcgg aggtatggct tatactttct taaaagcgca aggtaaagaa attggtattt
    12301 cattattaga agaagataaa atcgacttcg caaaagattt attagaaaaa catggtgata
    12361 aaattgtatt accagtagac actaaagttg ctaaagaatt ttctaatgat gccaaaatta
    12421 ctgtagtacc atctgattca attccagcag accaagaagg tatggatatt ggaccaaaca
    12481 ctgtaaaatt atttgcagat gaattagaag gtgcgcacac tgttgtatgg aatggaccta
    12541 tgggtgtatt cgagttcagt aactttgcac aaggtacaat tggtgtatgt aaagcaattg
    12601 caaaccttaa agatgcaatt acgattatcg gtggcggtga ttcagctgca gcagcaatct
    12661 ctttaggttt tgaaaatgac ttcactcata tttcaactgg tggcggtgcg tcattagagt
    12721 acctagaagg taaagaattg cctggtatca aagcaatcga taataaataa taaagtgata
    12781 gtttaaagtg atgtggcatg tttgtttaac attgttacgg gaaaacagtc acaagatgac
    12841 atcgtgtttc atcacttttc aaaaatattt acaaaacaag gagtgtcttt aatgagaaca
    12901 ccaattatag ctggtaactg gaaaatgaac aaaacagtac aagaagcaaa agacttcgtc
    12961 aatgcattgc caacattacc agattcaaaa gaagtagaat cagtaatttg tgcaccagca
    13021 attcaattag atgcattaac tactgcagtt aaagaaggaa aagcacaagg tttagaaatc
    13081 ggtgctcaaa atacgtattt cgaagataat ggtgcgttca caggtgaaac gtctccagtt
    13141 gcattagcag atttaggcgt taaatacgtt gttatcggtc attctgaacg tcgtgaatta
    13201 ttccacgaaa cagataaaga aattaacaaa aaagcgcacg ctattttcaa acatggaatg
    13261 actccaatta tatgtgttgg tgaaacagac gaagagcgtg aaagtggtaa agctaacgat
    13321 gttgtaggtg agcaagttaa gaaagctgtt gcaggtttat ctgaaaatca actaaaatca
    13381 gttgtaattg cttatgaacc aatctgggca atcggaactg gtaaatcatc aacatctgaa
    13441 gatgcgaatg aaatgtgtgc atttgtacgt caaactattg ctgacttatc aagcaaagaa
    13501 gtatcagaag caactcgtat tcaatatggt ggtagtgtta aacctaacaa cattaaagaa
    13561 tacatggcac aaactgatat tgatggggca ttagtaggtg gcgcatcact taaagttgaa
    13621 gatttcgtac aattgttaga aggtgcaaaa taatcatggc taagaaacca actgcgttaa
    13681 ttattttaga tggttttgcg aaccgcgaaa gcgaacatgg taatgcggta aaattagcaa
    13741 acaagcctaa ttttgatcgt tattacaaca aatatccaac gactcaaatc gaagcgagtg
    13801 gcttagatgt tggactacct gaaggacaaa tgggtaactc agaagttggt catatgaata
    13861 tcggtgcagg acgtatcgtt tatcaaagtt taactcgaat caataaatca attgaagacg
    13921 gtgatttctt tgaaaatgat gttttaaata atgcaattgc acacgtaaat tcacatgatt
    13981 cagcgttaca catctttggt ttattgtctg acggtggtgt gcacagtcat tacaaacatt
    14041 tatttgcttt gttagaactt gctaaaaaac aaggtgttga aaaagtttac gtacacgcat
    14101 ttttagatgg tcgtgacgta gatcaaaaat ccgctttgaa atacatcgaa gagactgaag
    14161 ctaaattcaa tgaattaggc attggtcaat ttgcatctgt gtctggtcgt tattatgcaa
    14221 tggaccgtga caaacgttgg gaacgtgaag aaaaagctta caatgctatt cgtaattttg
    14281 atgccccaac ttatgcaact gccaaagaag gtgtagaagc aagctataat gagggcttaa
    14341 ctgacgaatt cgtagtacca ttcatcgttg agaatcaaaa tgacggtgtt aatgatggag
    14401 atgcagtgat cttctataat ttccgacctg atagagcagc acaattatcg gaaatttttg
    14461 cgaacagagc attcgaaggc tttaaagttg aacaagttaa agacttattc tatgcaacat
    14521 tcactaagta taacgacaat atcgatgcgg ctatcgtttt cgaaaaagtt gatttaaata
    14581 atacaattgg tgaaattgca caaaataaca atttaacaca attacgtatt gcagaaactg
    14641 aaaaatatcc tcacgttact tactttatga gtggtggacg taacgaggaa tttaaaggtg
    14701 aacgccgtcg tttaattgat tcacctaaag ttgcaacgta tgacttgaaa ccagaaatga
    14761 gtgcttatga agttaaagat gcattattag aagagttaaa taaaggtgac ttggacttaa
    14821 ttattttaaa ctttgctaac cctgatatgg ttggacatag tggtatgctt gagccgacaa
    14881 tcaaagcaat cgaagcggtt gatgaatgtt tgggtgaagt cgttgataag attttagaca
    14941 tggacggtta tgcaattatt actgctgacc atggtaactc tgatcaagta ttgacggatg
    15001 atgatcaacc aatgactacg catacaacga acccagtacc agtgattgta acaaaagaag
    15061 gcgttacact tcgagaaact ggtcgcttag gtgacttagc acctacatta ttagatttat
    15121 taaatgtaga acaacctgaa gacatgacag gtgaatcttt aattaaacac taatattgta
    15181 aaagatgtta agtaaacgct taatgacact tattttttga aaataatagt aatatcattt
    15241 tgttaaatga aagaataaag ctataataat tatagaataa ctatttaaag gagattataa
    15301 acatgccaat tattacagat gtttacgctc gcgaagtctt agactctcgt ggtaacccaa
    15361 ctgttgaagt agaagtatta actgaaagtg gcgcatttgg tcgtgcatta gtaccatcag
    15421 gtgcttcaac tggtgaacac gaagctgttg aattacgtga tggagacaaa tcacgttatt
    15481 taggtaaagg tgttactaaa gcagttgaaa acgttaatga aatcatcgca ccagaaatta
    15541 ttgaaggtga attttcagta ttagatcaag tatctattga taaaatgatg atcgcattag
    15601 acggtactcc aaacaaaggt aaattaggtg caaatgctat tttaggtgta tctatcgcag
    15661 tagcacgtgc agcagctgac ttattaggtc aaccacttta caaatattta ggtggattta
    15721 atggtaagca gttaccagta ccaatgatga acatcgttaa tggtggttct cactcagatg
    15781 ctccaattgc attccaagaa ttcatgattt tacctgtagg tgctacaacg ttcaaagaat
    15841 cattacgttg gggtactgaa attttccaca acttaaaatc aattttaagc aaacgtggtt
    15901 tagaaactgc agtaggtgac gaaggtggtt tcgctcctaa atttgaaggt actgaagatg
    15961 ctgttgaaac aattatccaa gcaatcgaag cagctggtta caaaccaggt gaagaagtat
    16021 tcttaggatt tgactgtgca tcatcagaat tctatgaaaa tggtgtatat gactacagta
    16081 agttcgaagg cgaacacggt gcaaaacgta cagctgcaga acaagttgac tacttagaac
    16141 aattagtaga caaatatcct atcattacaa ttgaagacgg tatggacgaa aacgactggg
    16201 atggttggaa acaacttaca gaacgtatcg gtgaccgtgt acaattagtg ggtgacgatt
    16261 tattcgtaac aaacactgaa attttagcaa aaggtattga aaacggaatt ggtaactcaa
    16321 tcttaattaa agttaaccaa atcggtacat taactgaaac atttgatgca atcgaaatgg
    16381 ctcaaaaagc tggttacaca gcagtagttt ctcaccgttc aggtgaaaca gaagatacaa
    16441 caattgctga tatcgctgtt gctacaaacg ctggtcaaat taaaactggt tcattatcac
    16501 gtactgaccg tattgctaaa tacaatcaat tattacgtat cgaagatgaa ttatttgaaa
    16561 ctgctaaata tgacggtatc aaatcattct acaacttaga taaataatca ttttaaacat
    16621 taagtactgc cataatttta gttgaggatt attatgtcgg tataaattga ataaagtttt
    16681 tgagttcacg cttaaaaagt tcacgcttgt atttataacc tgccacagag ttgagactgt
    16741 ggtaggtttt ttattttgga tggcttcaaa tcatgattta taaggggctt gataaatcat
    16801 gaggtaacta ataacacata tttaacttgt attcttaaac tggtataata aatttatgtt
    16861 gaaatgaata ttgtatgaca gggtattcac ttttattaag aggtaaaatt aaataaaggt
    16921 tttatagaac gtatttaaat atatgaggag taaacaaatg gctgatagaa cgaataaaga
    16981 aattaaaaca ggacgcttta ttgcaactgc atcaatcgta ttctcaatat tattgattat
    17041 tcattacttt gtttcgttgg ataatgcgac tgccaaagca ttacttaatt taacgaatca
    17101 aaacacttca gataaagcga ttgattacat tttaaacagc tttagattca ctggtattat
    17161 gtatattttg gcttatctag caggcttcat cactttttgg aatcgacata cttatgtgtg
    17221 gtggtttatg tttgcagttt atgtatcaaa tagtttgttt acgttgatta atttatcaat
    17281 cacaattcaa gcaataaaag ctgcacacgg tgcgtactta acattgccaa ttttaattgt
    17341 tattataggt tcggttgcat tagcgattta tatgcttgtt gtttcaatta agcgtaaaag
    17401 tacatttaat cgctagaaaa ttgattttaa caataaaaat atgatatact acttgtcgta
    17461 tataaggaac ggaggacaat ttatgcatac atttttaatc gtattattaa tcattgattg
    17521 tattgcatta ataactgttg tactactcca agaaggtaaa agcagtggac tttcaggtgc
    17581 catcagtggt ggtgctgagc agttattcgg taaacaaaaa caacgtggcg tcgatttatt
    17641 cttaaataga ttaacaatta ttttatcaat attatttttt gtacttatga tttgcataag
    17701 ttatcttggt atgtaaggtc cggcgatgta aatgtcgggc ttttttattt ataattaaga
    17761 atgtaatagt ttaacaataa gctatgtaaa atatatagcc tagttaagta tgcaaaggga
    17821 gcgttagatt tatgcagata aaattaccaa aacctttctt ttttgaagaa ggcaaacgtg
    17881 ccgtgttatt attacatgga tttacaggca attcgtctga tgtacgtcaa ttaggtcgat
    17941 ttttacaaaa aaagggatat acttcgtatg caccgcaata tgaaggtcat gcagcaccac
    18001 cagaagagat acttcaatca agtccttttg tttggtttaa agatgcttta gatggctatg
    18061 actaccttgt tgaacaaggt tatgatgaaa tcgttgttgc tggcttgtca ttaggtggcg
    18121 attttgcatt aaaattaagc ttaaatagag atgtaaaggg tattgtaacg atgtgtgcac
    18181 ctatgggtgg caaaactgaa ggtgccattt atgaaggctt tttagaatat gcacgcaatt
    18241 ttaaaaagta tgaaggtaaa gatcaagaaa cgattgacaa cgaaatgcat cattttaaac
    18301 caactgaaac tttaaaagaa ttaagtgaag cattagatac gattaaagat caagttgatg
    18361 aggtgtttga cccaatttta gtgattcaag cagaaaacga caatatgatt gatccacaat
    18421 ccgcaaatta tatatatgaa catgtagact ctgacgataa aaatatcaag tggtacagtg
    18481 aatctggaca tgttattacg attgataaag aaaaagaaca agtatttgaa gatatttatc
    18541 aatttttaga gtcattagat tggtcagaat aaaaagagat tttaacatta gaaaggaggg
    18601 gcataatgaa tttaaagcaa tcaatagaag agattattaa tcaacctgaa tatgaaccta
    18661 tgtcagtgtc agattttcaa gatgcattag gtttaagtag tgccgactca tttagagatt
    18721 taattaaggt gctcgtagaa ttagaacaat caggattaat tgaacgtaca aaaacagaca
    18781 gatatcaaaa aaagcatagt tcaaaaggtc attcaaaatt gataaaggga acgttaagtc
    18841 aaaataaaaa aggctttgca ttcttaagac ctgaagatga ggatatggaa gatatattta
    18901 ttcccccaac aaaaattaat cgtgccttag atggagatac tgtaattgta gaaatacatc
    18961 aatctaaagg tgaacataaa ggtaaaattg aaggggaagt taagtcgatt gagaagcatt
    19021 cagtaactca agttgttggt acgtatagtg aagctagaca tttcggattt gttattccag
    19081 atgataaacg tattatgcaa gatattttca ttcctaaagg acaaagttta ggtgcagtag
    19141 atgggcataa ggtacttgtt caaattacta aatatgctga tggttcagat aatccagaag
    19201 gacatatttc tgctatttta ggacataaaa atgatcctgg cgtagatatt ttatctatta
    19261 tctatcaaca tggcatagaa attgaatttc ctgatgaagt gttacaagaa gctgaagcag
    19321 tacctgatca tattgagaat actgaaatta aaggccgtca tgatttacgt gatgaattga
    19381 caatcacaat tgatggtgct gatgctaaag acttagatga cgcaattagt gttaaaaagt
    19441 tagcgaacgg taatacgcaa ttaactgtaa gtattgctga tgtcagttat tatgtaactg
    19501 aagattcagc tttagataaa gaagcttatg atagagcgac aagtgtatat cttgttgacc
    19561 gtgtgatccc gatgattcca catcgattaa gcaatggtat ttgttcatta aatcctcacg
    19621 ttgatcgttt aacgttaagc tgtcgcatgg aaattgatgc tagtggtcgc gttgttaaac
    19681 atgaaatttt tgatagtgtt atacattctg attatcgaat gacgtatgat gcggtaaatc
    19741 agattattac tgaaaaggat cctgcgattc gagagcagta taatgaaatt acgcctatgc
    19801 tagatttagc acaagattta tctaatcgtt tgattcaaat gagaaaacga cgtggtgaaa
    19861 tcgattttga tattagtgaa gcaaaagtat tagttaacga agatggtata cctacagatg
    19921 ttcaattaag acaacgtggc gagggtgaac gtctaattga atcatttatg ttaattgcaa
    19981 atgaaacagt tgctgaacat tttagtaagt tagatgtacc ttttatttac cgagtgcatg
    20041 agcaacctaa atcagatcgc ttaagacaat tctttgattt tattacaaac tttggcatca
    20101 tgattaaggg tactggcgaa gatattcatc caacaacact tcaaaaggtt caagaagaag
    20161 tagaaggtcg acctgaacaa atggtcattt caacaatgat gttacgttca atgcaacaag
    20221 cgcattatga tgatgtgaac ttgggacatt ttggcttatc agctgaatat tatacgcatt
    20281 ttacatcacc aattagacgt tatcctgatt taacagttca tcgtttaatc cgtaagtatt
    20341 taattgagaa atcaatggat aacaaagaag tgaagcgttg ggaagacaaa ttgcctgagt
    20401 tagctgaaca tacttctaaa cgtgaacgtc gtgctattga ggcagaacgt gatactgatg
    20461 aattgaaaaa agcagaatat atgattcaac atattggtga tgaatttgaa ggtattgtca
    20521 gctcagtagc taacttcggt atgttcattg aattgccaaa tacgatagaa ggtatggttc
    20581 atattgcgaa tatgactgat gattattacc gttttgaaga gcgtcaaatg gcattaattg
    20641 gtgagcgtca agctaaagta tttagaattg gtgacacaat taaggttaaa gtgacgcatg
    20701 ttgatgtaga tgaacgatta attgattttc aaattgtagg tatgccttta ccgaaaaatg
    20761 atcgatcaca gcgcccagcg cgaggtaaga caattcaagc taaaacgcgt ggtaaatcat
    20821 tagataaatc gaaatctgat gataaaggtc ataagaaaaa aggtaagcaa cgtaaaggta
    20881 aaaatgaacg taaaaatgac aaatcaggaa acagtaaaca taagccattt tataaagata
    20941 aaagtgtgaa aaagaaagca cgtcgtaaga aaaaataagc agcaatgagg tgagtatgaa
    21001 tggctaagaa gaaatcacca ggtacattag cggaaaatcg taaagctaga catgattata
    21061 atattgaaga cacgattgaa gcgggaattg tattgcaagg cacagaaata aaatcaattc
    21121 gccgaggtag tgctaacctt aaagatagtt atgcgcaagt taaaaacggt gaaatgtatt
    21181 tgaataatat gcatatagca ccatacgaag aagggaatcg ttttaatcac gatcctcttc
    21241 gttctcgaaa attattattg cacaagcgtg aaatcattaa attgggtgat caaacacgtg
    21301 agattggtta ttcgattgtg ccgttaaagc tttatttgaa gcatggacat tgtaaagtat
    21361 tacttggtgt tgcacgaggt aagaaaaaat atgataaacg tcaagctttg aaagaaaaag
    21421 cagtcaaacg agatgttgcg cgcgatatga aagcccgtta ttaagcgatt tagttgctta
    21481 atcgggctat atttgatata gttatatgtg cttttgtaaa ttacaaaagt atgatttgtt
    21541 tgatttatta tttcggggac gttcatggat tcgacagggg tcccccgagc tcattaagcg
    21601 tgtcggaggg ttgtcttcgt catcaacaca cacagtttat aataactggc aaatcaaaca
    21661 ataatttcgc agtagctgcc taatcgcact ctgcatcgcc taacagcatt tcctatgtgc
    21721 tgttaacgcg attcaacctt aataggatat gctaaacact gccgtttgaa gtctgtttag
    21781 aagaaactta atcaatctag catcatgttg gttgtttatc acttttcatg atgcgaaacc
    21841 tttcgataaa ctacacacgt agaaagatgt gtatcaggac ctctggacgc gggttcaaat
    21901 cccgccgtct ccataaaaat atgcttggaa accttgattt aatggggttt taatctagca
    21961 agtgtcaaat atgtgtcaag aaaataattt tctgacacgt tgaccttgct cttttttatg
    22021 ttttttatct tttcttgtga ggaaggttaa attagctgtg tactttgata tgatagtatc
    22081 tgcttaggtt caaattttca tgaatgaaaa attaatagtt gtgtacatat aagattttgc
    22141 gttaagggtt gaaagaatat gtgtcaaata agtgtcaaaa aagttgagct ttgagtttta
    22201 atattgttca taaaaaaaat tctttatata agataattct tcattcaaaa caacaaaaaa
    22261 gagtaggcga gctactcttt tttattatat ttaacaatta aattagtatg tcattatgag
    22321 tgtaagtaag ctaatctata atgacaataa taacagtaaa gattataacg ttgaatgcga
    22381 gcattcataa atttatactt catctaaacc actgtggtcg tcatctttat gcttttcttt
    22441 ttctttctct cgttcttgtt cttttttgta ctcttcttca aattcttttt ctttcttttc
    22501 tacttcttct cttgtttccg ctctatgaga aaaatcttcg gttttaagtt tactaaattt
    22561 gaatgattta gaatcaactg ttttatcttc tgagtattta tggacattta aattaatatt
    22621 tccatcacct cttaattcat agataaacat ggcttgtgca gttttgcctt ttttaatttg
    22681 atcttggtta tgttctgtcc aatctttata ttttttatca cttaaaagat aaccatctct
    22741 taatttattt actgtatttt tatcatcttg agtgatatta atatagtcat gagaaataga
    22801 agatggattt aaatctttat cgtctttttt agcagtaatt tccattttaa aagcgatata
    22861 tttctttttc tcatcttttt cattgatgat aaacggttct tttattttag cttcaaattt
    22921 gtcactaaca atagtatcgc ctttaatttt tatatccata ttttttttgc ttttaaattc
    22981 tttaagttct tcatttaatt cttcattgtc attttctttc tttttgtgac tagtgctctc
    23041 tttttttgca ctatcttgat gatgtccaca agcacctaag ataagtgtac ttgctaataa
    23101 tatccccatt acttttttca tttaacatgt ctcctttatt tcgcaaaaat ttattttaaa
    23161 aactctaaac gacttatcgt tttgagtaat taaacaaagt tgatattttg tgagattcta
    23221 agatgatatt aaata
//
LOCUS       DAKPJH010000032        23175 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.032, whole genome shotgun sequence.
ACCESSION   DAKPJH010000032 DAKPJH010000000
VERSION     DAKPJH010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23175
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.032"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            215..1210
                     /locus_tag="OY092_001078"
     CDS             215..1210
                     /locus_tag="OY092_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HCX1076032.1"
                     /translation="MASLKNKHFMIGLSLTFIVALFSFLAAKLPILDKVGALTIAILI
                     AILYRHFRGYPEQYSSGITFSSKYLLRFAIILYGLKLNIFDIIGQGSRLLAIDVGVVI
                     FSIVMMLFVNKLLHGDKNIALLLGVGTGVCGAAAIAAVAPIFKSREKDTAISIGIIAL
                     IGTIFSLIYTAIYAIFSMTTNVYGAWSGVSLHEIAHVVLAGGFGGSDALKIALLGKLG
                     RVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIGFVIMALVNTYVTIPSALLNIL
                     NTVSTICLLMAMVALGLNVAFKDLKNRALKPLMTIIITSICLSSLAFIVVHWLYS"
     gene            complement(1269..1835)
                     /locus_tag="OY092_001079"
     CDS             complement(1269..1835)
                     /locus_tag="OY092_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HCX1076033.1"
                     /translation="MNIVLLSGSTVGSKTRIAMDDLKNELEVINEGHQIELMDLRDLE
                     LEFSVGKNYLDTTGDVYKLTTSLMQADVIFIGFPIFQASIPGALKNVFDLLPVNAFRD
                     KVIGLVATAGSSKHYLIPEMHLKPILSYMKAHTMQTYVFIEEKDFSNQQIVNDDVVFR
                     LKALAQSTMRTAKVQQHVLEEENNQYDF"
     gene            complement(1849..2910)
                     /locus_tag="OY092_001080"
     CDS             complement(1849..2910)
                     /locus_tag="OY092_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCX1076034.1"
                     /translation="MAKLEMNKNTPLEFGLYSLGDHLLNPLKGEKVSYEQRINEIIEA
                     SKLADEAGIDVFAVGESHQEHFTTQAHTVVLGAIAQATKHIKVSSSSTIISATDPVRV
                     FEDFATLDLISHGRAEIVAGRASRTGIFDLFGYDLKDYDELFEEKLGLLLELNKTERI
                     TWSGKYRPELRNMKIFPRPIDNTLPIWRAVGGPPASAIKAGKQGVPMMITTLGGPAMN
                     FKGSIDAYRQAATEAGFDASPKSLPVSTASLFYTAETTQDAMREFYPHLNTGMSFIRG
                     VGYPKQQFANSSDYREALMVGSPQQIIEKILYQHELYGHQRFMAQLDFGGVPFENVMK
                     NIELIGNDIIPAIKKHLSK"
     gene            complement(2924..3850)
                     /locus_tag="OY092_001081"
     CDS             complement(2924..3850)
                     /locus_tag="OY092_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076035.1"
                     /translation="MNIVGHHHISMYTKDAKRNKDFYTNVLGLRLVEKSVNQDNPSMY
                     HLFYGDEVGTAGTILSFFEIPNAGHKQPGTETIYRFSLLVPNQAALHYFEKRLDNNGI
                     KSERLYYLGQEGIVFKDEDDLEIILLVNDSFEVPHQWQHNAYSEIPQAYQILGIGPVE
                     LRVRNAARTVEFLENVLGYRKRDNKSFDVLTLAPQGLYSDFVVIEQQGQRERPGRGYI
                     HHIAVNTPQMSDLDAIYKKLQQQPQSNSGIIDRYFFKSLYYRHNSIMYEFATEAPGFT
                     IDTPLEQLGSQLNLPDFLEAEREQIESKLHEI"
     gene            4162..5520
                     /gene="glpT"
                     /locus_tag="OY092_001082"
     CDS             4162..5520
                     /gene="glpT"
                     /locus_tag="OY092_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HCX1076036.1"
                     /translation="MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLR
                     KNFSLAMPALQEQGFTKAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALT
                     AIVNLLMGFVPFFTSGIGIMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALW
                     NVAHNVGGGIMAPIAAWGITTTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDT
                     PQSQGLPPIEIYKNDFATSDKKTLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVR
                     YGVLDWAPVYLSEEKHFDLKASGWAYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFF
                     FMLGVTVFVLIYWLNPPGNAWLDNVSLIAIGFLIYGPVMLIGLQALDYVPKKAAGTAA
                     GLTGLFGYLFGAVMANIVLGAVVDKFGWDVGFILLTAISVFAMLSFILTWNKVGQETV
                     HH"
     gene            complement(5480..5956)
                     /locus_tag="OY092_001083"
     CDS             complement(5480..5956)
                     /locus_tag="OY092_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MepB family protein"
                     /protein_id="HCX1076037.1"
                     /translation="MYKSKILLKYIFSEELDVKDLTEEKYNQDYEALTFSFKEETYQS
                     RLAKKTPTKAGYFVACWTKDENNCNQPYSKEAFADYLMIIVIDEELSGYFLFPRELLV
                     EKGILTTFEHKGKMAFRVYPKWCNQLNKTAGQTQKWQCKYFLSFNDERFLVLLYSK"
     gene            complement(6059..7414)
                     /gene="mepA"
                     /locus_tag="OY092_001084"
     CDS             complement(6059..7414)
                     /gene="mepA"
                     /locus_tag="OY092_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498905.1"
                     /note="MepA (multidrug export protein A), as described
                     originally in Staphylococcus aureus, is a MATE transporter
                     shown to be over-expressed after culturing in the presence
                     of tigecycline, owing to mutation of its repressor MepR,
                     and then to be one of several factors contributing to
                     elevated tigecycline resistance; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MepA"
                     /protein_id="HCX1076038.1"
                     /translation="MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYVIG
                     FLEDSHMISAISLTLPVFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYG
                     GIALGLIVILVTLPFSDQIAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFAR
                     AIGAPMISMIGMLASVGLNIILDPILIFGFDLNVVGAALGTAISNVAAALFFIVYFMK
                     NSDVVSVNIKLAKPNKEMLSEIFKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASY
                     GISFRLVQFPELIIMGLCEGVVPLIAYNFMANKGRMKDVIKTVIMSIGVIFVVCMIAV
                     FTIGHHMVGLFTTDQAIVEMATFILKVTMTSLLLNGIGFLFTGMLQATGQGRGATIMA
                     ILQGAIIIPVLFIMNALFGLTGVIWSLLIAESLCALAAMLIVYLLRDRLTVDTSELIE
                     G"
     gene            complement(7521..7940)
                     /gene="mepR"
                     /locus_tag="OY092_001085"
     CDS             complement(7521..7940)
                     /gene="mepR"
                     /locus_tag="OY092_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor MepR"
                     /protein_id="HCX1076039.1"
                     /translation="MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQ
                     QDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVE
                     AFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ"
     gene            8152..10107
                     /locus_tag="OY092_001086"
     CDS             8152..10107
                     /locus_tag="OY092_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HCX1076040.1"
                     /translation="MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIE
                     QYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETT
                     DPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDYYRKAY
                     AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIA
                     IQRLNENFSFDIPINEINKWRHTNQYAIASKMIENLERSCNVTFPESEIIFITLHLLG
                     SKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRI
                     KYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIER
                     VATHKQSMIKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNID
                     YVISTVPCEISAVPVIHVDPFINQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPE
                     HRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISPHIALIH
                     AGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSS
                     DLYRQDFLDGNIFKIKQHIALTMTKEA"
     gene            10112..10555
                     /locus_tag="OY092_001087"
     CDS             10112..10555
                     /locus_tag="OY092_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCX1076041.1"
                     /translation="MSLDILSTTRIIVKEQVNDWTEAITIASQPLLQEQIIEQGYVQA
                     MIDSVNELGPYIVIAPEIAIAHARPNNDVHQVGLSLLKLNQHVAFCDENHYASLIFVL
                     SAIDNHSHLSVLQNLATILGDNQTVQQLLTATNAQDIKNILKEHD"
     gene            10557..10841
                     /locus_tag="OY092_001088"
     CDS             10557..10841
                     /locus_tag="OY092_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCX1076042.1"
                     /translation="MKILVVCGHGLGSSFMVEMNAQEALRQLNAPSDIEVEHSDIMTA
                     SPEMADLFICGRDLAENAERLGDVLVLDNILDKAELQQKLSEKLQQLNMI"
     gene            10856..12202
                     /locus_tag="OY092_001089"
     CDS             10856..12202
                     /locus_tag="OY092_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HCX1076043.1"
                     /translation="MQAILNFIVDILSQPAILVALIAFIGLIVQKKPAATITSGTIKT
                     ILGFLILSAGADVVVRSLEPFGKIFQHAFGVQGIVPNNEAIVSLALKDFGTTAALIMV
                     CGMIVNILIARFTNLKYIFLTGHHTFYMAAFLAIILTVSHIKGWLTIVIGALVLGLIM
                     AVLPALLQPTMRKITGNDQVALGHFGSISYFAAGAVGQLFKGKSKSTEEIKFPKGLSF
                     LRESTISISITMALLYFIACLFAGVSYVHESISDGQNFIVFSLIQGVTFAAGVFIILT
                     GVRLILAEIVPAFKGISEKLVPNSKPALDCPIVFPYAQNAVLIGFFVSFITGVIGMFI
                     LFLFGGVVILPGVVAHFFLGATAAVFGNARGGIKGAVAGAALNGILITFLPLLFLPFL
                     GELGGAATTFSDTDFLAVGIVFGNAVKYMGLFGAILFIIIVGATAILLKGRQKPQQ"
     gene            complement(12296..13321)
                     /locus_tag="OY092_001090"
     CDS             complement(12296..13321)
                     /locus_tag="OY092_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HCX1076044.1"
                     /translation="MNNKVLVTGGTGFVDMRIISRLLEQGYEVKTTIRDLSKADKVIK
                     TMQDNGISTERLMFVEADLSQDEHWDEAMKDCKYVLSVASPVFFGKTDDAEVMAKPAI
                     EGIQRILRAAEHAGVKRVVMTANFGAVGFSNKDKNSITNESHWTNQDEPGLSVYEKSK
                     LLAEKAAWDFVDNENTTVEFATINPVAIFGPSLDAHVSGSFHLLENLLNGSMKRVPQI
                     PLNVVDVRDVAELHILAMTNEQANGKRFIATADGQINLLEIAKLIKEKRPEIAQKVAT
                     KKLPDFILSLGAKFNHQAKEGKLLLDMNRNVSNERAKTLLGWEPIATQEEAILAAIDS
                     MVKFHLI"
     gene            complement(13637..14659)
                     /locus_tag="OY092_001091"
     CDS             complement(13637..14659)
                     /locus_tag="OY092_001091"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HCX1076045.1"
                     /translation="MYLIEPIRNGEYITDGAIALAMQVYVNQNIFLDDDILFPYYCDP
                     KVEIGRFQNTAIEVNQDYIDKHSIQVVRRDTGGGAVYVDKGAVNMCCILEQDTSIYGD
                     FQRFYQPAIKALHTLGARDVIQSGRNDLTLNGKKVSGAAMTLMNNRIYGGYSLLLDVN
                     YEAMDKVLKPNRKKIASKGIKSVRARVGHLREALDEKYRGITIEEFKNLMVTQILGID
                     DIKEAKRYELSEADWEAIDELADKKYKNWDWNYGKSPKYEYNRSERLSSGTVDITISV
                     EQNRIADCRIFGDFFGQGDIKDVEQALQGTKMTREDLTHQLKQLDIVYYFGNVTVESL
                     VEMILS"
     gene            complement(14637..15581)
                     /locus_tag="OY092_001092"
     CDS             complement(14637..15581)
                     /locus_tag="OY092_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HCX1076046.1"
                     /translation="MQSSKWNAMSLLMDDKTKQAEVLRTAIDEADAIVIGIGAGMSAS
                     DGFTYVGERFTENFPDFIEKYRFFDMLQASLHPYGSWQEYWAFESRFITLNYLDQPVG
                     QSYLALKSLVEGKQYHIITTNADNAFDVADYDMTHVFHIQGEYILQQCSQHCHAQTYR
                     NDDLIRKMVVAQQDMLIPWEMIPRCPKCDAPMEVNKRKAEVGMVEDAEFHAQLQRYNA
                     FLEQHQDDKVLYLEIGIGFTTPQFVKHPFQRMTRKNENALYMTMNKKAYRIPNSIQER
                     TIHLTDDISTLITTALRNDSTTKNNNIGETEDVLNRTD"
     gene            complement(15571..16371)
                     /locus_tag="OY092_001093"
     CDS             complement(15571..16371)
                     /locus_tag="OY092_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-ADP-ribose hydrolase"
                     /protein_id="HCX1076047.1"
                     /translation="METLKSNKARLEYLINDMRRERNDNDVLVMPSSFEDLWELYRGL
                     ANVRPALPVSDEYLAVQDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAI
                     VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYN
                     LPAKYIIHTVGPQIRRLPVSKMNHDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAF
                     PQDEAAEIAVRTVESYLKETNSTLKVVFNVFTDKDLQLYKEALNRDAE"
     gene            complement(16372..16704)
                     /locus_tag="OY092_001094"
     CDS             complement(16372..16704)
                     /locus_tag="OY092_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HCX1076048.1"
                     /translation="MKKLANYLWVEKVGDLYVFSMTPELQDDIGTVGYVEFVSPDEVK
                     VDDEIVSIEASKTVIDVQTPLSGTIIERNTKAEEEPTILNSEKPEENWLFKLDDVDKE
                     AFLALPEA"
     gene            complement(16738..17739)
                     /locus_tag="OY092_001095"
     CDS             complement(16738..17739)
                     /locus_tag="OY092_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCX1076049.1"
                     /translation="MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTE
                     HHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRI
                     DLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
                     PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMD
                     AKVMASVFVIVADNEAEVAALQHALDVWLLGKLQFAEFEHFPSVDTAQKYKLNDRDKE
                     MIQAHQARIIAGTQEQVRAQLDDFIATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL"
     gene            complement(17853..17951)
                     /locus_tag="OY092_001096"
     CDS             complement(17853..17951)
                     /locus_tag="OY092_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076050.1"
                     /translation="MESIFKIKIELMNVICRSENMNMKKKNTSEKI"
     gene            18047..19246
                     /locus_tag="OY092_001097"
     CDS             18047..19246
                     /locus_tag="OY092_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HCX1076051.1"
                     /translation="MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADL
                     AYAARRSNSAGMQVTGAAYIEPYGQLFEYGFNIDHDACIPGLTNMASTMKQHGSLAII
                     QLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHDVIAMSHEKINSIIQQYRDATLRAI
                     KAGFDGVEISIAQRLLIQTFFSTFSNKRTDHYGADSLKNRARLCLEVMCAVQEVIDKE
                     APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS
                     RTPGEHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGMSSPFVTEPD
                     FVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQ
                     NYHDSSS"
     gene            19319..20146
                     /locus_tag="OY092_001098"
     CDS             19319..20146
                     /locus_tag="OY092_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076052.1"
                     /translation="MTEIKDKVITKDAFELPYTIIKAKHQPTKGAIVYIHGGGLMFGK
                     ANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFG
                     RSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTS
                     PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVFIAHCN
                     GDYDVPVEESEHIMNHVPHSTSERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMV"
     gene            complement(21282..22736)
                     /locus_tag="OY092_001099"
     CDS             complement(21282..22736)
                     /locus_tag="OY092_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HCX1076053.1"
                     /translation="MLMTKNQAEKWFDNSLGKQFNPDGWYGFQCYDYANMFFMLATGE
                     RLQGLYAYNIPFDNKAKIEKYGQIIKNYDSFLPQKLDIVIFPSKYGGGAGHVEIVESA
                     NLNTFTSFGQNWNGKGWTNGVAQPGWGPETVTRHVHYYDNPMYFIRLNFPNNLSVGNK
                     AKGIIKQATTKKEAVIKPKKIMLVAGHGYNDPGAVGNGTNERDFIRKYITPNIAKYLR
                     HAGHEVALYGGSSQSQDMYQDTAYGVNVGNKKDYGLYWVKSQGYDIVLEIHLDAAGES
                     ASGGHVIISSQFNADTIDKSIQDVIKNNLGQIRGVTPRNDLLNVNVSAEININYRLSE
                     LGFITNKNDMDWIKKNYDLYSKLIAGAIHGKPIGGLVAGNVKTSAKNQKNPPVPAGYT
                     LDKNNVPYKKEQGNYTVANVKGNNVRDGYSTNSRITGVLPNNTTITYDGAYCINGYRW
                     ITYIANSGQRRYIATGEVDKAGNRISSFGKFSTI"
     gene            complement(22748..23050)
                     /locus_tag="OY092_001100"
     CDS             complement(22748..23050)
                     /locus_tag="OY092_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HCX1076054.1"
                     /translation="MDAKVITRYIVLILALVNQFLANKGISPIPVDDETISSIILTVV
                     ALYTTYKDNPTSQEGKWANQKLKKYKAENKYRKATGQAPIKEVMTPTNMNDTNDLG"
BASE COUNT         7238 a         4519 c         3617 g         7801 t
ORIGIN      
        1 ggccccgcca acttgcacat tattgtaagc tgacttttcg tcagcttctt tgttggggcc
       61 ccaccaataa gggttgtagt gcctattact ttgattgatg tccttgatac ctatcacaca
      121 acttaattta ataactactt tattaaccat tccaaattta tatttaaaaa tactacaaaa
      181 cagtgctaaa atgctattaa aggaggcact gctcatggca tcattgaaaa ataagcattt
      241 tatgattgga ctatcactaa catttatagt cgcattattt agctttttag cagctaaatt
      301 gccaatccta gataaggttg gcgcattaac tatcgcgata ttaatcgcta ttctatatcg
      361 tcactttaga ggatatcctg aacaatatag ctcaggtatt acgttttcat ctaaatattt
      421 attaagattt gcaattatcc tgtacggact taaactcaat atatttgata ttatcggtca
      481 aggtagtaga ctattagcca tcgatgtagg tgtcgttatt tttagtattg taatgatgct
      541 ctttgtcaac aaactgttgc atggtgacaa aaacatcgca ttattactag gtgtaggtac
      601 aggcgtttgt ggtgctgccg ctattgctgc agtagctcca atattcaaat cacgtgaaaa
      661 ggatacagct attagtatcg gtatcatcgc attgattggt acgatatttt cacttatata
      721 tacagctatc tatgctatct tttcaatgac gacaaatgtt tatggcgctt ggtccggcgt
      781 tagtcttcat gaaattgcac acgttgtctt agctggtggc tttggtggta gtgatgcact
      841 taaaattgca cttcttggta aacttggtag agtattctta ctgattccat taaccattgt
      901 acttatttta attatgcgtt tccgttcatc agaatcatct agcaagggtc gaataagcat
      961 tccttacttt ttaattggat ttgtcattat ggccttagtg aatacatatg taactattcc
     1021 gtcagcattg ctaaatattt taaatactgt atcaacaatt tgcttattaa tggccatggt
     1081 tgctttaggg ttaaatgtgg catttaaaga tcttaaaaat cgcgcactta aaccgcttat
     1141 gacaatcatt attacctcaa tatgcttgtc atcacttgcc tttatcgtcg ttcactggct
     1201 atatagttaa ataaaaagac gctcaaacac ttacaaattt agtgtgccga gcgtcttatt
     1261 tttatacttt aaaagtcgta ttggttgttt tcttcttcaa gcacatgttg ttgtacttta
     1321 gcagttcgca ttgtggattg tgccaacgct tttaaacgaa atacaacatc atcattgaca
     1381 atttgttgat ttgaaaaatc tttctcttca ataaatacat acgtttgcat cgtatgtgct
     1441 ttcatgtaac tcaatattgg ttttaaatgc atttcaggaa ttaaataatg tttactagaa
     1501 cctgctgtcg ctacaagtcc tattaccttg tcacgaaacg cattgaccgg aagcaaatca
     1561 aatacatttt tcaaagcacc agggatggaa gcttgaaaaa ttggaaaacc aataaaaatc
     1621 acatcagcct gcattaacga cgtcgttaat ttatatacat ctcctgtagt atctagataa
     1681 ttctttccaa cactaaattc taattcgagg tctcgtaaat ccatcaattc tatttggtgt
     1741 ccctcattga tgacttctag ttcatttttt aaatcatcca tagcaattct cgttttagaa
     1801 cctactgtgg aacctgacaa taatacaata ttcatgatga cgcccctcct attttgataa
     1861 atgcttttta atcgccggta taatgtcgtt gccaattaac tctatattct tcataacatt
     1921 ttcaaatggc acaccgccaa aatcaagctg tgccataaaa cgttgatgac catacaactc
     1981 gtgttgatac aatatctttt caataatttg ttgcgggctt ccaaccatta gcgcttctcg
     2041 ataatctgac gaattagcaa attgctgttt cggataacca acgccacgaa taaatgacat
     2101 ccctgtattc aaatgtggat aaaattctct catagcatcc tgagttgttt cagctgtata
     2161 aaacagactc gctgtactta ctggtaaaga cttaggcgaa gcatcgaaac ctgcttcagt
     2221 tgctgcttga cgataagcat ctatagaacc tttaaagttc attgctgggc caccaagagt
     2281 tgtaatcatc attggcacac cttgttttcc cgctttaata gcacttgcag gtggaccacc
     2341 aacagcacgc catattggca atgtattatc gattggtctt gggaatattt tcatatttct
     2401 aagttctgga cgatattttc cagaccaagt aatacgctca gttttattta actctaaaag
     2461 taaacctaat ttttcttcaa acaattcatc atagtctttt aaatcatagc caaacaagtc
     2521 aaaaatacct gttcttgatg ctctgccagc tacaatttcg gctctaccat gagaaatcaa
     2581 atctaatgtc gcgaagtctt caaatactct tacaggatct gttgcactaa taatcgttga
     2641 agaacttgaa actttaatat gctttgtcgc ttgggcaatt gcacctaaca caaccgtatg
     2701 tgcctgtgtt gtaaaatgct cctgatgact ttcaccaact gcaaaaacat caatacctgc
     2761 ttcatctgct aatttacttg cttcaataat ttcattaata cgttgctcat aactaacttt
     2821 ttcacctttc aatggattca ataaatgatc acctaaggaa tacaaaccaa actcaagagg
     2881 cgtattttta ttcatttcta attttgccat taaacattct cctttatatt tcgtgtaact
     2941 tactttcaat ttgttcacgt tctgcttcta aaaagtcagg caagttcaat tgacttccta
     3001 attgttcaag aggtgtatca atagtaaatc caggcgcttc agtcgcaaat tcatacataa
     3061 ttgaattatg gcgatagtat aatgatttaa agaaatagcg atcaattata cctgaattac
     3121 tttgtggttg ttgttgtaat ttcttgtaaa ttgcatctaa gtcactcatt tgaggtgtat
     3181 taactgcaat atgatggata taacctcgtc caggtctttc acgttgtccc tgttgctcaa
     3241 taactacaaa atccgaatat aaaccttgtg gtgctaatgt cagcacatcg aatgatttat
     3301 tatctctttt gcgataacct aagacatttt ccaaaaattc taccgtacgc gctgcatttc
     3361 taactcttaa ttcgactggc cctattccta aaatttgata tgcttgaggt atttcactat
     3421 aagcgttatg ttgccattga tgtggtactt caaaactatc attaacaagc agtatgattt
     3481 ctaagtcgtc ttcatcttta aagacaatac cttcttgtcc aagatagtac aaacgttcag
     3541 acttaatacc attattatca aggcgttttt caaaataatg aagtgccgct tgatttggta
     3601 ctaataatga aaatcgataa atcgtttcag tacctggctg cttatgaccc gcattgggaa
     3661 tttcaaaaaa gcttaaaatt gttccagctg tacctacttc gtccccataa aacaaatgat
     3721 acattgacgg attgtcttga ttaaccgact tttcaactaa tcgtaatcca aggacatttg
     3781 tgtaaaaatc cttattacgt tttgcgtctt ttgtatacat ggatatgtga tgatgcccta
     3841 ctatattcat actatctctc ctattagtat aaattttata ccaacctaca taaaaaagat
     3901 agttatatgc catttacccc ttttctgcaa ataaaaatat gtttgcactc cattcgtaga
     3961 tacacagcta gtaagtataa cgacataata attgcataat tattaattta tgttcgacca
     4021 tttacttttc tgactgttta taaaatgctt caaaaactaa atctgcaaga tttcacaaaa
     4081 gtatattgac aacgctttca tacatgtcta atataagttt atcgcacaaa atgcatataa
     4141 atacatatta aggaggattt tatgaatttt cttaaacctg caaagcatat taagcctttg
     4201 ccagaaaatc agatagatga tacctataaa cgattacgtc tccaagtatt tcttgggatt
     4261 ttcatcggtt acgctgggta ctatttatta cgtaaaaact tttcattagc gatgccggca
     4321 ttgcaagagc aaggttttac aaaagcggaa ctaggttttg cactttctgc tgtttccatc
     4381 gcatatggat ttagtaagtt ctttatgggt actgtaagtg atcggagcaa tgctcggata
     4441 ttcttagttc ttggattagc actcactgct atcgtcaatt tgttaatggg atttgtaccg
     4501 ttctttacat caggtatcgg tattatgttt gtcctattat tcttaaatgg atggtttcaa
     4561 ggtatgggct ggccaccttc aggtcgtgtt ctcgttcact ggtttagtgt aagtgaacgc
     4621 ggaagtaaga ctgccctttg gaacgttgcg cataatgttg gtggaggtat tatggcacct
     4681 attgctgctt ggggtattac aacaacagca tttatcaact ttggttattt aaaaggtttc
     4741 gaaggtgtat tcatttaccc tgcactctta gcacttatca ttgccgcaat ttcatacgta
     4801 ttgattagag acacacctca atctcaaggt ttacctccaa tcgaaattta taaaaatgac
     4861 tttgctacaa gcgataagaa aacattagaa acagaattaa ctacaaaaga aattttattt
     4921 aaatatgtac taaacaataa atgggtatgg gcaattgcct ttgcaaatat atttgtttat
     4981 ttcgtgcgtt atggtgtact tgattgggcg ccagtctact taagtgaaga aaaacatttc
     5041 gacttaaaag catcaggttg ggcatacttc ttatacgaat gggctggaat tcctggtaca
     5101 ttattatgtg gttacatttc tgataaatta ttcaaaggtc gtcgtggacc tgcaggtttc
     5161 ttctttatgt taggtgtcac agtatttgta ttaatttatt ggttaaatcc tccaggcaat
     5221 gcttggttag acaatgtctc attaattgcc attggtttct taatatatgg accagttatg
     5281 ttaattggtt tacaagcatt agattatgta cctaaaaaag cagctggcac agcagctgga
     5341 ttaacaggat tatttggtta tctgtttggt gctgtaatgg ccaacatcgt cttaggtgct
     5401 gtagttgata aattcggatg ggatgtcggt tttattttat taacagcaat cagtgtgttt
     5461 gcaatgttga gctttatcct cacttggaat aaagtaggac aagaaaccgt tcatcattaa
     5521 atgataaaaa atatttacat tgccactttt gtgtttgccc tgctgtttta ttcaattgat
     5581 tacaccactt aggataaact ctaaaagcca tcttaccttt atgttcaaat gtagttaaga
     5641 tacctttttc taccaataat tccctaggaa ataaaaaata accgcttaat tcttcatcaa
     5701 taactataat cattaagtaa tctgcaaacg cctctttcga gtatggttga ttacaattgt
     5761 tctcatcttt tgtccaacat gcaacaaaat aacctgcttt agtcggtgtt ttcttagcta
     5821 acctactttg atatgtttcc tctttaaagc taaatgttaa tgcttcgtaa tcttgattat
     5881 atttttcttc agttaaatct ttaacgtcta attcttcact aaaaatatat ttcaacagta
     5941 ttttagattt atacatatgc caatctcact ttatttttca taatcgtatc atatatttat
     6001 ttttttcgaa aaatacactt ccgaccgaaa tatactcagc cagaggtgta cgaaatattt
     6061 aaccttctat taattcagat gtatcaactg tcaaacgatc acgtaataaa tagacgatta
     6121 acattgctgc taaagcacaa agtgactcag caattaataa tgaccaaatg acacctgtta
     6181 gtccaaacaa agcattcata ataaataata caggaatgat aatcgcacct tgtaaaatgg
     6241 ccataattgt agcaccgcga ccttgaccag ttgcttgaag cataccagta aacaagaaac
     6301 ctataccatt taataacaat gatgtcattg ttactttcaa aataaatgtc gccatctcaa
     6361 caatggcttg atcagtagta aatagtccga ccatatgatg tccaattgta aatacagcaa
     6421 tcatacatac aacaaagata acgccgatag acatgataac tgttttgata acgtctttca
     6481 tacggccttt atttgccata aagttatatg caattagtgg tacaacacct tcacataatc
     6541 ccatgataat aagttctgga aattgcacaa gtctaaatga gataccataa cttgcaatcg
     6601 cgaagtttcc ataatgtgct aaaaataaat ttaaaactaa tcctgtgaat cccattaaga
     6661 tactcattaa aaatgcagga ataccgattt taaagatttc agaaagcatt tctttattag
     6721 gtttcgcaag tttaatatta actgacacaa cgtcactatt tttcataaaa taaacgataa
     6781 agaatagagc agcagcaaca ttactgattg cagtacccaa agctgcacca acaacgttta
     6841 aatcaaaacc aaaaattaaa attggatcta aaataatatt taagcctaca ctagctaaca
     6901 taccaatcat agaaatcatt ggtgccccaa ttgcacgtgc aaattgttct aatatgaaga
     6961 acaaaattac aaaaggtgca cttaaaaaca ttactttcaa ataattactt gttaaagcta
     7021 acgtttcacc tctcgcccct aaaattgctg cgatttgatc actgaatggt aaagtaacta
     7081 aaatcacgat aagtcctagt gcaataccac cataaataga gaaactactt acaaatttac
     7141 tcttactata gtctttcgca cctaataaac gtgaaatata agttcctgca ccaacgccaa
     7201 ataaattacc caaccccatt aagatagcaa aaactggcag tgttagagag atagcagaaa
     7261 tcatgtggct atcttctaaa aatcctataa cgtaaatatt taatatgcca taaataacgc
     7321 ttaataaagt ccctatcatc attggcaatg agaaatgcat catcgcttta aatactggcg
     7381 atttctcaaa ataatataat tgttcgtctt tcattgttca atactccttg tctttttcaa
     7441 taattagctt actaacaatt agatatctaa ctataatatt aaagataaag tgactgattt
     7501 ctaccagtca cgcttaccat ttattgtaaa ctagataaca ttttagttaa gtttgctttc
     7561 atttgttcat tttcttcttc agataactgc gatacgagtg tttgctccat ttcatcaaat
     7621 atcgaagtga atgcttctac aagtttaatc ccagaggtag tcagtcctat attctttctt
     7681 ctcgtatctt gtgcatcgac atagcgatag atcagctttt tacgttcaag gttccttaat
     7741 aaattactga cagttggacc tgttcgttgt aatgctttag caatatcatt ttgtgtcagt
     7801 ccatcttgtt gatgtgcata aagataacct aacgtatgac cttgctcatt tgtaatatca
     7861 aattgctcta acttttgatc agccttttgt ttcatctcat gactaatcat tctaaataaa
     7921 tacgaataag tgaattccat ttattgcacc accatttcgt tagatgtcta actaaatata
     7981 ctgcgacatt tttaaattgt caacatgaat atctaattta ttttaaaaat tcctataaaa
     8041 tcttgcgcca taaacatttt gatatgcaat ttttcggatt aaaatatgaa agagattgca
     8101 tatctacgtt ttcgagaaat cgcttacaat tacaaatagg aggatattac gttgttaagt
     8161 tatagacaaa tcgaaatttt gtatctttta attcatgagc aaacgtttat tccaatcaat
     8221 accattgcta atcaacttgg tgtatcacct cgtaccattc aatatgatat agcatatatt
     8281 gagcaatatg ctgaaactta tcattaccaa gtcagtcgta ataaagctgc aggcatcaaa
     8341 gtaacaacag ctcacgcgac actattaaat gaattagagc acaatctaac gaatcaaatt
     8401 catttttcaa aagatgagcg actcacacat atcgctttaa agttattcga aacaactgac
     8461 cctgtttcaa caaagcaact tgcgcaagat gttaatgttt cgcgtcggac aattgcagat
     8521 gatattaaaa tgattcaagc ccaactagat caataccatt taaagttaaa ttatgtccac
     8581 aataaaggat tcaatattat tggtgaggaa gattattatc gtaaagcgta tgcacacttt
     8641 atacatcaat atatgaaaca agctgcacct tttatagagg ctgatatctt taattcagaa
     8701 tcaatcgcat tggttcgccg tgccattatt aagacattaa atagtgaaaa ttatcattta
     8761 gttcagtcgg ctatcgatgg cttaatctat catatactca ttgccattca gcgtctaaat
     8821 gaaaattttt cgttcgatat acctatcaat gaaattaata aatggcgaca tactaatcag
     8881 tatgctattg cttcaaaaat gatagaaaac ttagaacgca gttgtaatgt cacatttcca
     8941 gagtctgaaa ttatctttat cacgttacat ttactaggct ctaaaatgac cgaacataca
     9001 gcatcttcaa ttacctttga atatcatgat ttatcgcaaa atatacatga attgatcact
     9061 tgtgttagcc aagaattagg cattgatatg tcaaaagaca acaagttgca taccagtctg
     9121 atcacacata tcaaaccagc tatacatcgt attaaatacg atatgctaca acctaatcct
     9181 ttgaggcaag aagttatgcg tcgctatcct caaatcatag aagccgttag caagcatatt
     9241 agcccaattg aacaggatgc tgctattcgc ttcaacgaag atgaattaac atacattaca
     9301 attcatttcg catcaagtat agagcgtgtt gcaacacata agcaatcaat gattaaggtt
     9361 gtcttactat gtggttctgg tataggcacg tcgcaacttt taaaatcaaa actaaatcat
     9421 ctgtatcctg agtttcacat ttgggatgcc tattccattt atcaattgga agaaagtcga
     9481 ttattgcaag ataacattga ttatgtcatt tcaacagtac cttgtgaaat atcagctgta
     9541 ccagttattc atgtcgatcc atttatcaat caacaatctc gtcaaaaatt gaatcaaatt
     9601 atcaatgact caagagaaca acgagtcatg aaaatggcaa ctgatggcaa gtcactcgca
     9661 gatttattgc ctgaacatcg catcattata aataaacaac cattatcaat tgaatccgca
     9721 attgcagtgg ctgtgcaacc tttaatcaat gatggcattg tctattcaaa ttatacagct
     9781 gcaattttaa aacaatttga acaattcggg tcatatatgg tcattagtcc acatattgca
     9841 cttattcacg ctggtactga ttatgtacag aatggtgtag gtttcgcact aacatatttc
     9901 actgaaggga ttatctttgg tagtaaagct aacgatcccg ttcaccttgt aattacatta
     9961 gcaacggacc accccaatgc acatttaaag gcattgggac agttaagcga atgcttaagc
    10021 agcgacttat atcgacaaga tttcttagat gggaatattt ttaaaattaa acaacacatt
    10081 gctttaacta tgacaaagga ggcttaataa cgtgtcatta gacattttgt caacaacacg
    10141 catcattgta aaagaacaag taaatgattg gactgaagct ataactatag cttctcagcc
    10201 attactacaa gaacaaatta ttgaacaagg ctatgttcaa gcaatgattg atagcgttaa
    10261 tgaacttgga ccttatatcg ttatcgcacc tgaaattgca attgcacatg caagaccgaa
    10321 caatgacgta catcaagttg gtttaagtct attaaagttg aaccaacatg tggcattctg
    10381 tgatgaaaat cactacgcat cactcatttt tgtattgagt gccatcgaca atcattcaca
    10441 cttatctgta ttacaaaatt tagcaaccat actgggcgat aaccaaacag tccagcaact
    10501 attaactgca acaaacgcac aagacattaa aaacatttta aaggagcatg attaatatga
    10561 agattttagt agtatgtggc cacggtttag gaagtagttt tatggtagaa atgaacgcac
    10621 aagaagcact taggcaactt aatgcaccat ctgatatcga agttgaacat agtgacatta
    10681 tgacagcaag tccagagatg gctgacttgt ttatttgtgg tagagattta gctgaaaatg
    10741 ccgaacgtct aggggatgtc ttagttcttg ataatatttt agataaagct gaattacaac
    10801 aaaagctctc agaaaaatta caacaactta acatgattta aaggaggtac gacctatgca
    10861 agcaatcctt aattttatag tcgatatttt aagtcaacca gccattcttg ttgcactgat
    10921 tgcctttata ggtttaatcg ttcagaaaaa acctgccgca acgatcactt caggaaccat
    10981 taaaacgata ttaggcttct taattttaag tgcaggtgct gatgtcgtcg ttcgatctct
    11041 tgagccattc ggcaaaatat ttcaacacgc attcggtgtg caaggtatcg tacctaacaa
    11101 cgaagctatc gtctcactag ccttaaaaga ttttggaaca acagctgcac tcatcatggt
    11161 ctgtggcatg attgttaata ttttaattgc ccgcttcact aatttaaaat atatcttttt
    11221 aacaggtcat catacatttt acatggctgc gtttttagca atcattttaa cagtcagtca
    11281 tattaaaggc tggctaacga ttgttatcgg cgcactcgta ttaggattaa tcatggcagt
    11341 cttacctgca ttactccaac ctacgatgcg aaaaattaca gggaatgacc aagtagcgtt
    11401 aggtcatttt ggctcaatca gttactttgc cgcaggtgct gtaggtcaat tattcaaagg
    11461 taagtctaaa tcaacggaag agattaaatt tccaaaaggc ttaagtttct tacgagaaag
    11521 tacaattagt atctcgatta cgatggcatt actttacttc atcgcatgct tatttgcggg
    11581 cgttagttat gtacacgaat ctattagtga tggtcaaaac tttattgtct tttcattaat
    11641 tcaaggtgtg acatttgctg ctggtgtatt tattatttta accggcgttc gtttaatctt
    11701 agctgaaatc gtcccagcat ttaaaggaat ttctgaaaag cttgtaccaa attctaaacc
    11761 tgcattagac tgccctattg tgttccctta tgcacaaaat gcagtattaa ttggattctt
    11821 tgtcagcttt attacaggtg tcatcggtat gtttatctta ttcttatttg gtggcgtcgt
    11881 cattttacct ggcgtagttg cacacttctt cttaggtgca acggctgctg tattcggtaa
    11941 tgcaagaggc ggtattaaag gtgctgttgc tggcgccgct ctaaatggta tcctaatcac
    12001 gtttttacca ttattattct tgccattttt aggcgaatta ggtggtgctg caacaacatt
    12061 ctcagataca gactttttag ctgtcggtat cgtgttcggt aacgcagtaa aatatatggg
    12121 attatttggt gcgattctat ttattattat cgtaggtgcg acagcaattt tattaaaagg
    12181 tcgtcaaaag ccacagcaat agtgttaacg taaaaatata aaacaccgtc acatattgag
    12241 tgaatgcccc ttttatcaag aggaaagcca cttacttatg gacggtgttt ttgtattata
    12301 ttaaatgaaa tttaaccata ctatcaattg ctgctaaaat tgcttcttct tgtgtcgcaa
    12361 tcggttccca accaagtaat gtttttgcac gttcgttact tacattgcgg ttcatatcta
    12421 ataaaagttt accttcttta gcttgatgat taaatttagc acctagactc aaaataaagt
    12481 ctggcaattt tttagtagca actttttgag ctatttcagg tcgtttttct ttaattaatt
    12541 ttgcaatttc caataaatta atttgtccat cagccgtagc aataaatcgc ttgccattag
    12601 cctgttcatt tgtcattgcc aaaatgtgta gttctgctac atctctcaca tcaacaacat
    12661 ttaatggaat ttgaggtaca cgtttcattg aaccattcaa taaattttct aataaatgaa
    12721 agcttcctga aacatgtgca tctaatgatg gtccaaaaat tgcaactgga ttgattgtgg
    12781 caaattctac tgtcgtattt tcattgtcaa caaaatccca cgctgccttt tcagctaaca
    12841 attttgattt ttcatatact gataagcctg gttcatcttg atttgtccaa tgactttcat
    12901 ttgtgattga atttttatct ttattactaa aaccaactgc accaaagttt gcagtcatca
    12961 ccacacgctt cacgccagca tgttctgcag ctcttaaaat acgttgtatg ccttcaatgg
    13021 caggcttcgc catcacttct gcatcgtctg ttttaccgaa aaacactgga gatgccacac
    13081 tcaacacata tttacaatct ttcattgctt catcccaatg ttcatcttgt gataaatccg
    13141 cttcgacaaa cattaatcgc tctgtggaaa taccattgtc ttgcattgtt ttaattactt
    13201 tatcagcttt acttaaatca cgtatcgtcg ttttgacctc ataaccttgt tctaataatc
    13261 gtgaaatgat tcgcatgtca acaaaccctg taccacccgt cactaatact ttattattca
    13321 tcacataatc tcctctttgt gtctattgat tactcattat agcagtcatt atattttgac
    13381 gtatataaat agactttggt agctagtatt taatcttact ggtataaatg aaaatgaatt
    13441 tattccttta aaaactatca ttgaccattt tcaaataccc aatcactaat aaacacaaac
    13501 gctataaata tgatgtcttt gctaattaac taaattcatt ttcaatcgta tgttcaaatt
    13561 acataactac atagtcacca ttttaaaagc aaatacacat attcaacgag ggtgcgacat
    13621 taacgcctaa acaaaattaa cttaaaatca tctcaaccaa tgattcaacc gtaacattac
    13681 caaaataata aacgatgtct aattgcttta actgatgcgt taaatcttct cttgtcattt
    13741 ttgttccttg tagcgcttgt tccacatctt ttatatcacc ttgtccaaag aaatcaccaa
    13801 aaattctaca atctgcaata cgattttgtt caacagaaat ggtaatatct acagtacctg
    13861 atgataatct ttcacttcga ttatattcat atttgggtga cttgccataa ttccaatccc
    13921 aatttttata ctttttatca gctaattcat caatcgcttc ccaatctgct tcggataatt
    13981 catacctttt tgcctcttta atgtcatcga ttcccaaaat ctgcgtcacc attaaatttt
    14041 taaattcttc aatggttata ccacgatact tttcatccaa tgcttctcta agatgaccaa
    14101 cacgtgcgcg cacagattta atccctttcg atgcaatctt tttgcgatta ggctttaaca
    14161 ctttatccat tgcttcataa ttaacatcaa gtaatagcga ataaccgcca taaatacgat
    14221 tgttcattaa tgtcattgcg gcgcctgaca cttttttgcc gttcaatgtt aaatcatttc
    14281 taccgctttg tatcacatct cttgcaccta atgtatgcaa tgcctttata gctggttgat
    14341 aaaatcgttg aaaatcacca taaattgaag tgtcttgttc taaaatacaa cacatattaa
    14401 cggcaccttt atcaacatac acagcgccac caccagtatc tcggcgaact acttgaatac
    14461 tgtgtttatc tatataatct tgattcactt ctatagcagt attttgaaaa cgtccaattt
    14521 ccacttttgg atcacaataa taagggaata aaatatcgtc atctaaaaag atattctgat
    14581 taacataaac ttgcatggcg agtgcaatcg caccatcagt aatatattct ccattcctaa
    14641 tcggttctat taagtacatc ttctgtctct ccaatgttgt tatttttcgt tgtgctatcg
    14701 ttccggagtg ctgttgtaat caatgttgag atatcatcag tcaaatgtat ggtacgttct
    14761 tgaattgaat tcggaatgcg atatgccttt ttattcatcg tcatataaag tgcattttca
    14821 tttttacgtg tcatacgctg aaaaggatgt ttcacaaatt gtggtgtagt aaaaccaatt
    14881 ccaatttcca aatacaacac tttatcatct tgatgttgct ctagaaaagc attataacgt
    14941 tgcagttgcg catgaaattc agcatcttca accatgccaa cttccgcttt acgtttattc
    15001 acttccattg gagcatcaca ttttggacat cttggaatca tctcccaagg tataagcata
    15061 tcttgttgcg caacaaccat tttacgaatt aaatcatcat tgcgatacgt ttgagcatga
    15121 caatgctgac tacactgttg cagtatatac tcgccttgta tatgaaatac atgcgtcata
    15181 tcataatcag ctacatcgaa agcattatct gcattcgtag ttataatgtg gtactgttta
    15241 ccttccacca aggattttaa agcgaggtaa gactgaccta caggttgatc taaatagttt
    15301 aatgtaataa aacgactctc aaacgcccaa tactcttgcc aactgccata aggatgtaaa
    15361 ctcgcttgca acatatcaaa gaagcgatat ttttcaataa aatccgggaa attttccgta
    15421 aaacgctctc ctacatatgt aaatccgtca gatgcagaca tgcctgcacc aattccaatc
    15481 actatcgcat ctgcttcatc aatcgcagta cgcaatactt cagcctgctt tgtcttgtca
    15541 tccattaaca gagacattgc attccattta ctactctgca tcacggttca atgcctcctt
    15601 atacagttgt aaatccttat ctgtaaatac attgaacacg actttcaatg ttgaatttgt
    15661 ttctttgaga tagctttcta ctgttcgaac agcaatttct gctgcttcat cttgaggaaa
    15721 agcaaataca cctgtagata tacagcaaaa agcgacatga tttaaactat gttgatcagc
    15781 caatttaaga cagctaagat aacatttagc taacaagtca tgattcatct ttgaaacagg
    15841 caatcgacgt atttgcggac caaccgtatg aattatatac tttgctggca aattatatcc
    15901 acgtgttatt ttggctttac ctacaccttc attgcgccct tgttgtcgaa tgatctctgc
    15961 acaatcaagt cgaacttgaa cacccgcttt tgtatgaata atattatcaa tgcagtcatg
    16021 attagcttgc atacatccta gaaaacgact atttgcagca ttaacaatag catcgatttt
    16081 taacgtcgtg atatcacctt gccaaacaaa gatattgtca ccttttatcg gcttcaaatc
    16141 cttcaaatcc gtaacatgtt gacgattcaa atcacttaac atagcatctt gtacagctaa
    16201 atattcatca cttacaggta atgccggtct gacatttgct aagcctcgat ataattccca
    16261 caaatcttca aatgaagatg gcattaccaa tacgtcattg tcatttctct ctcgacgcat
    16321 atcattgatt aaatattcaa gtctcgcttt atttgatttt aacgtttcca tttaagcctc
    16381 cggtaatgct aggaatgctt ctttatcgac atcatccaat ttgaacaacc aattttcttc
    16441 tggtttttca gagtttaaaa ttgtcggttc ttcttccgct tttgtatttc gctcaataat
    16501 cgttcctgac aatggcgttt gcacatcaat gaccgttttc gatgcttcga tactcacaat
    16561 ttcatcatcc actttaactt catctggact tacgaattca acataaccta ctgtcccaat
    16621 atcatcttgc aattcaggtg tcatactaaa cacatacaaa tctcctactt tttctaccca
    16681 taaataattg gctaactttt tcatcttatc ttcatccttt ctcttctatt taaaatgcta
    16741 caaatagatt tccgcgagta attttaatgt tttacaacgc tgttcaatgc ctggaataag
    16801 cggtgctact aacacctcat caacttcaaa cgtagcaatg aaatcatcta attgtgctct
    16861 aacctgttct tgtgtacctg caatgatgcg tgcttgatgt gcttgaatca tctctttgtc
    16921 tcgatcatta agcttatact tttgcgctgt gtctaccgat ggaaaatgtt caaattctgc
    16981 aaattgtaat ttacctaata accaaacatc taaggcatgt tgtaatgctg ctacttccgc
    17041 ttcgttatca gctacaatga caaatacaga tgccatcacc tttgcgtcca ttttaatcgt
    17101 tgatgcttgg aaatgttttt tgtaaatatc aatgttatcc ttcgctgcat gtatcgcatt
    17161 tatatccggt agcaaaaatg ttccaacaga aagtcctata cctagttcag cagctatttt
    17221 ggcagatgtt gcgctactac ttaataacca catttctgga aaatgatcaa tgtgtggttg
    17281 gacacctaac gtatgcgcac ttggtttatc ctttattgta agataatcac gtaataacga
    17341 aatcgattca tcgtaactat catatgtagg atttattcca tctaaagctt gctttaccat
    17401 agtagtacct ggattattac caatacctaa atcaatacga tttggatata acgctgccat
    17461 cattctaaaa tgctcagcaa ttttataagg gcgatagtgc ggcaacatca caccaccaga
    17521 accaactcgt atgtgatttg tctgcgccaa tgtatgcatc atcaaaagtt ctggactact
    17581 acacgcaaac gctggtacat tatgatgttc cgtaaaccaa attcgcttaa agccaagtcg
    17641 atctgctaat tttgcaagtg tcactgaatc ctgcaacgcc ttttgtgcat ccttaccttc
    17701 atctattaag gcatagtcta atacgcttaa tttaaccaat ccgtcatctc caaacttatc
    17761 ctgtcatgtc aaacagacat aacattttag cgttcttaat accattccct cttcatatac
    17821 ccacgtatat gataacgttt ttcaattaac ttttatatct tttcgcttgt atttttcttt
    17881 ttcatattca tattttcaga cctacaaatg acattcatta gttcaatttt aattttaaaa
    17941 atgctttcca tgtaccaatt ctattctatc aagactgttc atcattgatt attcattctt
    18001 tccatggtac tttgaaaaca atattgaata gaaaaggaat catagtatgt accgatacaa
    18061 accactttta caatcaatcc acttacctaa tggcatcaaa atttcgaatc gctttgtatt
    18121 atcaccaatg accgtaaacg catcaacaaa agaaggctat attacaaaag cagacttggc
    18181 ttatgctgca cgtcgctcta attcagctgg tatgcaagtc accggcgctg cttacattga
    18241 gccatatggt caattgtttg aatacggctt taatattgat catgatgctt gtatccctgg
    18301 attaactaac atggcatcta cgatgaaaca acatggtagc ctcgctatta ttcagctagc
    18361 gcatgctggt cgtttttcaa atcaagcaat tttaaatttt ggaaaggtgt atggaccaag
    18421 ccctatgacg ttacattcac cgattgaaca cgatgttatc gccatgtctc atgagaaaat
    18481 caatagcatc attcagcagt atcgcgatgc tacattacgc gcgattaaag caggttttga
    18541 tggtgtggaa atttcgattg cacaacgttt gctgattcaa acatttttct caactttttc
    18601 gaataaacgt acagaccatt acggtgccga ctcattaaaa aatcgtgcaa gattatgttt
    18661 agaagttatg tgtgcggtac aagaagtgat tgataaagaa gcacctgaca attttatttt
    18721 aggatttcga gcaacgccag aagaaaccag aggtagtgat ttaggatata ccattgacga
    18781 gttcaatcaa ttaatcgatt gggtcatgga cgtttcaaac atccaatatt tagcaatcgc
    18841 tagctggggg cgacatattt atcaaaatac gtctcgtaca ccaggtgaac atttcggtcg
    18901 accagttaac caaattgtct atgaacattt agctggtcgc atccctttaa ttgcaagtgg
    18961 cgggattaat tctccagagt ctgctttaga tgctttacaa catgcagata tggtcggcat
    19021 gtcttcgcct tttgtcacag aacctgactt tgtgcataaa cttgctgaac agcgacctca
    19081 tgatatcaat cttgaatttt ctatggcaga tttagaagat ttagccattc cacatgctgc
    19141 ttttaaagat attgttaaaa tgatggatta tggggaaggt ctaaagaagc atacccgtga
    19201 cgctttacgt caattggaac agaattatca tgactcatcg tcttaagact atttttcatg
    19261 gaaatttaag acagtgttat aatgacatca atatcaaaaa taaggagcct gtatagtcgt
    19321 gactgaaatt aaagataaag taattactaa agatgcgttt gaattaccct acacaattat
    19381 taaagcgaag catcaaccaa caaaaggtgc cattgtctac atccacggtg gtggattaat
    19441 gttcggtaaa gctaacgatt tatccccaca gtatatcgat atccttacgg aacattacga
    19501 tttaattcaa ctaagttatc gtttattacc agaagtaagt ctcgattgca ttattgagga
    19561 tgtctacgca tcattcgatg cgattcaatc acaatattct aattgcccta tttttacctt
    19621 tggcagatca tcaggtgcat atttaagtct attaattgca cgagacagag atattgatgg
    19681 tgttattgat ttttatggtt atagtcgcat caacactgaa ccttttaaaa caactaatag
    19741 ttattacgca aaaatagctc aaagcgtaaa cgaaacaatg attgcacaac tcacttcacc
    19801 aacaccggtt gttcaagatc agatcgcaca acgtttttta atctacgttt atgcacgtgg
    19861 cacaggtaaa tggataaata tgattaacat tgctgattat actgattcaa aatataatat
    19921 tgcaccagat gaacttaaaa cacttccacc tgttttcatt gcgcattgta atggcgatta
    19981 tgatgttccc gttgaggaaa gcgaacatat catgaatcat gttccacatt caacatctga
    20041 acgcgtgaat aaaaacgagc atgattttga tcgtagacct aatgacgaag caatcactat
    20101 ttatcgtaaa gttgttgatt tcttaaacgc tataacaatg gtgtaatata tcattatttt
    20161 aaaaaactca atttatcatc atgataaaca gttattcgat caaccatatt attcatacaa
    20221 tttattaagc tcataaaaag atacgcctgt ccctttagtt ttcgctaatg agacaggcgc
    20281 tttatttcac tttactattt tgaaattcaa cactgtgatg ttacttatat ctgctgtgcc
    20341 atgttagtag cacgaaatac atagcatatt aaattcagaa gatgaattta acttgctttc
    20401 aattgtgtac ctttaccttc agttgcttca acacgcaaca agtcatttat aatacctgta
    20461 tagaagttgg cgagttctgc acctttacgc ttgaaatcta ggaaatctac accgataaaa
    20521 tcgacatgat cccatccttg tatgatggta aaccggtcat tctctaacgt acacgagcgt
    20581 ccaaaaacac tgttgtatca aggtttttgt catttttaac cttttagatt ttccacaagc
    20641 gtttgccctt tttcaaataa tctgcccttt ttttgccccg aaaaaacgca aaaaataacc
    20701 acaatcctaa attaatagga tctgtggttt tgttggttgt aggggaataa atataaccgt
    20761 atcgattaag atacggttgt agcgaatgta acatttctat gttgttaaga tatatgtatc
    20821 gagtgatgac aaggaagatg tctcctgtgg gaccaacagt cagatacatg gcctctgccc
    20881 ggctatatag ttcactccta ctatataaaa gtaagtataa cataaaaagc accccgtaaa
    20941 ctgttatacg ggaatgctaa agtcatatat actacgggga gtagtatgaa aactatgctc
    21001 tctatcgtaa gaaaaaaaca cccagtgaca tgcttgggtg aacaaggata gatgtaaata
    21061 gttgatgcat gtgtaaaaca tcatagcaaa aaactagccc gaaggctagc tataacataa
    21121 aaaaataggc aagtaccgaa gtacctgcca gttacgcaca tttaaatctt gagagtaatg
    21181 ttaaaaagtg tataggaata ttaacatcca tccaaatagt tatttaataa ctgtaagatt
    21241 ccctataatt aatgtagcaa aatttttatt ctaagtaaat actaaatcgt gctaaactta
    21301 ccaaaactac ttattctatt acctgccttg tctacctctc ctgtcgctat ataacgacgt
    21361 tgtccactat tagcaatata agtaatccat ctataaccat taatacaata tgcaccgtca
    21421 tacgtaattg ttgtgttgtt gggtaatacc cctgtaattc ttgaattagt tgaataaccg
    21481 tctcttacat tattaccttt aacattagct actgtgtaat tgccttgttc ttttttataa
    21541 gggacattat tcttatcgag tgtataacct gctggcactg gtggattttt ttggttttta
    21601 gctgatgttt taacattacc agctaccaaa ccacctatag gcttaccatg aatcgcaccg
    21661 gctattaatt tagaatacaa gtcatagttt ttcttaatcc aatccatatc atttttatta
    21721 gtaataaaac ctaattcaga taaacgataa tttatattta tttctgctga tacattaaca
    21781 tttagtaaat cattacgagg tgtcacacct cttatttgtc ctaagttatt tttaataaca
    21841 tcttgtatac ttttatcaat agtatctgca ttgaattgac ttgagataat aacatgccca
    21901 ccacttgcgc tttctcctgc tgcgtctaaa tgtatttcta gaacaatgtc atacccctgt
    21961 gatttaaccc aatataagcc ataatctttt ttattgccta cattaacacc gtatgcagta
    22021 tcttgataca tatcttgtga ttgacttgag ccaccgtata atgcaacttc atgtcctgca
    22081 tgtcttaaat acttagcgat attaggcgtt atatatttac gtataaaatc gcgttcgttt
    22141 gttccgtttc ctactgctcc aggatcgtta taaccatgac cggctacaag cataattttt
    22201 ttaggtttaa ttactgcctc tttttttgta gtcgcttgct taataatacc tttagcttta
    22261 ttgccaacgc ttaagttgtt agggaagttt aacctaataa aatacattgg attgtcataa
    22321 taatgaacat gtcttgtcac agtttcagga ccccaaccag gttgcgcaac gccattagtc
    22381 caacctttac cgttccagtt ttgaccaaat gatgtgaaag tgtttaaatt tgcgctctca
    22441 acaatttcaa cgtgtccagc tccgccacca tactttgacg ggaaaatgac aatatccaac
    22501 ttttgcggta aaaagctgtc atagttttta attatttgac catatttttc aatctttgct
    22561 ttattatcaa acgggatatt ataagcatat aaaccttgca gcctttcgcc tgtcgctaac
    22621 ataaagaaca tattggcgta atcataacac tgaaatccat accaaccatc tgggttgaat
    22681 tgtttcccta atgaattgtc aaaccatttt tctgcttgat tttttgtcat taacatatat
    22741 caaccaccta ccctaaatca tttgtgtcgt tcatattcgt aggtgtcatt acttctttaa
    22801 ttggcgcttg ccctgttgct tttctatact tattttcagc tttatatttc tttaattttt
    22861 gatttgccca tttaccttct tgagatgttg gattgtcttt atacgttgta tataaagcga
    22921 ctacagtaag tattattgat gatatagttt catcgtctac tggaattggg ctaatacctt
    22981 tgttcgctaa gaattgattt actaatgcta agatcaatac gatgtatctt gttattactt
    23041 ttgcatccat ttgtttgctc cttttatcca aaataaaaag ccagtgccga agcactgact
    23101 cttaactatt acttacactt accaaaccag aaacacgtcc acagcgaagc tccaaaattt
    23161 aatccgaaca tggta
//
LOCUS       DAKPJH010000033        22734 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.033, whole genome shotgun sequence.
ACCESSION   DAKPJH010000033 DAKPJH010000000
VERSION     DAKPJH010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22734
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.033"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(255..563)
                     /locus_tag="OY092_001101"
     CDS             complement(255..563)
                     /locus_tag="OY092_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HCX1076055.1"
                     /translation="MTEHNHDSQLEINNEEELLTLFDEEGNEVLYRKVLEFYHPEFKK
                     EYVILAEEGAQSDEDDMIELVPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTEMEE
                     "
     gene            complement(578..1006)
                     /gene="ruvX"
                     /locus_tag="OY092_001102"
     CDS             complement(578..1006)
                     /gene="ruvX"
                     /locus_tag="OY092_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HCX1076056.1"
                     /translation="MLQHKILGLDVGSRTVGIAISDIMGWTAQGLDTLRINEENNELG
                     IDQLVDIIKKHNVGTVVIGLPKNMNNSIGFRGEASLTYKEKLLEAYPSIEIVMWDERL
                     STMAAERSLLEADVSRQKRKQVIDKMAAVFILQGYLDSLH"
     gene            complement(1010..1270)
                     /locus_tag="OY092_001103"
     CDS             complement(1010..1270)
                     /locus_tag="OY092_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HCX1076057.1"
                     /translation="MENFDKTMKFDYEELPTQDVRDVLNNVYRTLDERGYNAVNQIVG
                     YLLSGDPAYIPRQNEARNQIRHIDRDVIMEELVSYYLKEQNK"
     gene            complement(1333..3963)
                     /gene="alaS"
                     /locus_tag="OY092_001104"
     CDS             complement(1333..3963)
                     /gene="alaS"
                     /locus_tag="OY092_001104"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HCX1076058.1"
                     /translation="MKKLKASEIRQKYLDFFVEKGHMVEPSAPLVPIDDDTLLWINSG
                     VATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKQ
                     EAIEFAWEFLTSDKWMGMEPDKLYVTIHPEDMEAYNIWHKDIGLEESRIIRIEGNFWD
                     IGEGPSGPNTEIFYDRGEAYGQDDPAEEMYPGGENERYLEVWNLVFSEFNHNKDHSYT
                     PLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIEKVSGKQYLVNSEQDVAFK
                     VIADHIRTIAFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVAD
                     IMEPYYPNVKEKADFIKRVIKSEEERFHETLEDGLAILNELIKKAKATTNEINGKDAF
                     KLYDTYGFPIELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLK
                     NITSASTFVGYDTATAQTTLTHLIYNGEEVSQVEAGETVYFMLTETPFYAVSGGQVAD
                     TGIVYNGNFEIAVSEVTKAPNGQNLHKGVVQFGQVNVGATVSAEVNQNDRRDIQKNHS
                     ATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTKDEIDQVERLVNEEIWKG
                     IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFSIELCGGIHVRNTSEIGLFK
                     IVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKSQLKVKSDDQVVDKLTQLQDE
                     EKALLKQLEQRDKEITSLKMGNIEDQVEEINGYKVLVTEVDVPNAKAIRSTMDDFKSK
                     LQDTIIILASNVDDKVSMVATVPKSLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGG
                     TQPENISKSLSFIKDYIKNL"
     gene            complement(4306..6783)
                     /locus_tag="OY092_001105"
     CDS             complement(4306..6783)
                     /locus_tag="OY092_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HCX1076059.1"
                     /translation="MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDT
                     MPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAETFEKEMPQTKEAIISYLSSDLF
                     KGVGKKTAQNIVNALGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
                     IRLHDLGFGPKLSMAIYQFYLGDTLTILDQNPYQLIYDIKGIGFNKADQLARNIGIAY
                     NDNERLKAALLYTLEEECIKQGHTYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQY
                     LNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQSDLQMHIGEIEDA
                     NQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVN
                     DDYPVVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDE
                     MSMVDTWLFHQFLSAVPLDAQLIFVGDEDQLPSVGPGQVFKDLIESKAIPRVNLTEVY
                     RQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVNKGYTM
                     ADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPN
                     DNIFNGDIGVIVGIFWAKENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQ
                     GSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLGDPEAFDIGLKTNGQARLTQ
                     LCTLLKNYFNSEDEEMLENTATNDTGASQTTIDDQVEAPMPSNDSEEVTSDSTKTDTN
                     VLTEATMFKIDPMINMGEITPYDFIER"
     gene            complement(6785..7453)
                     /locus_tag="OY092_001106"
     CDS             complement(6785..7453)
                     /locus_tag="OY092_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HCX1076060.1"
                     /translation="MIDQQTIYQYIQNGKIEEALQALFGNIEEDPTIIENYINAGIVL
                     ADANEIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQV
                     DCNYMIGMAFNQLESFKLALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQL
                     KHVLTIDKNHVDARYNLGLALFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKM
                     KEEE"
     gene            complement(7970..9088)
                     /gene="mnmA"
                     /locus_tag="OY092_001107"
     CDS             complement(7970..9088)
                     /gene="mnmA"
                     /locus_tag="OY092_001107"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HCX1076061.1"
                     /translation="MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTD
                     ENGVCTATEDYNDVIEVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMC
                     NKEIKFKAFLDHAMNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQ
                     QQLSKVMFPIGDIEKSEVRRIAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQP
                     GDMITLDGKKMGKHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHD
                     ALYSDYLIASDYSFVNPEDNDLDQGFECTAKFRYRQKDTKVFVKRENDHALRVTFAEP
                     VRAITPGQAVVFYQGDVCLGGATIDDVFKNEGQLNYVV"
     gene            complement(9089..10231)
                     /locus_tag="OY092_001108"
     CDS             complement(9089..10231)
                     /locus_tag="OY092_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCX1076062.1"
                     /translation="MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARK
                     YLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSV
                     LHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD
                     IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVT
                     LDYPQLGGEQELKRRAGTENLAQIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQE
                     RAIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHV
                     LDAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES"
     gene            10543..11556
                     /locus_tag="OY092_001109"
     CDS             10543..11556
                     /locus_tag="OY092_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCX1076063.1"
                     /translation="MAIKYSALNLVPIREGEDERTAINDMVKLAQHLDELSYERYWIA
                     EHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIMLPNHAPLIVAEQFGTMATLFPNR
                     VDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGK
                     NVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVI
                     VCLNTIVAENDEEAQYLASSMAQVMVSITRGRMQPVQPPTHDLQNILTPREYAMAMER
                     QKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDSYRRFKNVINQINEK
                     NTL"
     gene            complement(11793..11939)
                     /locus_tag="OY092_001110"
     CDS             complement(11793..11939)
                     /locus_tag="OY092_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076064.1"
                     /translation="MSFMDKAKDAVEKFKNSDNEQVKNVKDKINEYTGSNNEEKKENE
                     DKEK"
     gene            complement(11979..12161)
                     /locus_tag="OY092_001111"
     CDS             complement(11979..12161)
                     /locus_tag="OY092_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HCX1076065.1"
                     /translation="MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVV
                     ENAKNKITDAIDKLKK"
     gene            complement(12261..12683)
                     /locus_tag="OY092_001112"
     CDS             complement(12261..12683)
                     /locus_tag="OY092_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HCX1076066.1"
                     /translation="MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQ
                     LVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQ
                     LWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI"
     gene            12768..14042
                     /locus_tag="OY092_001113"
     CDS             12768..14042
                     /locus_tag="OY092_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500242.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HCX1076067.1"
                     /translation="MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMI
                     FYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKDMQLVVEEAKMSGQVILLLDEIH
                     RLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
                     TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHV
                     TLQDAKDCLQKGAFVSDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTI
                     VRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQAVIELCLSPKSNSA
                     MSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPD
                     KLKNKIYYEPKTTSKSEQQLKEIYNNLLKQRP"
     gene            complement(14203..14976)
                     /locus_tag="OY092_001114"
     CDS             complement(14203..14976)
                     /locus_tag="OY092_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HCX1076068.1"
                     /translation="MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALART
                     NIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYT
                     EETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
                     DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQ
                     MPPSSNAFVPSVVGLICASYVVNDVLKDIPVRRIKDKGQ"
     gene            complement(14976..15104)
                     /locus_tag="OY092_001115"
     CDS             complement(14976..15104)
                     /locus_tag="OY092_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076069.1"
                     /translation="MGLIAFNKCFFVEFLKNNQSNNAKYKILSYYVLMYKSVKEVK"
     gene            complement(15169..15359)
                     /gene="ssrS"
                     /locus_tag="OY092_001116"
     ncRNA           complement(15169..15359)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="OY092_001116"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(15437..17203)
                     /gene="aspS"
                     /locus_tag="OY092_001117"
     CDS             complement(15437..17203)
                     /gene="aspS"
                     /locus_tag="OY092_001117"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HCX1076070.1"
                     /translation="MSKRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDRE
                     GIVQVVFNPAFSEEALKIAETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNI
                     KVINKSETPPFSINEENVNVDENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDD
                     EGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQI
                     VKCFRDEDLRADRQPEFTQVDIEMSFVDQEDVMQMGEEMLKKVVKEVKGVEINGAFPR
                     MTYKEAMRRYGSDKPDTRFEMELIDVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAE
                     QYTRKDMDALTEFVNIYGAKGLAWVKVVEDGLTGPIGRFFETENVETLLTLTGAEAGD
                     LVMFVADKPNVVAQSLGALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAA
                     HHPFTSPKEADIAKLGTAPEEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGF
                     TKEQAQEQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCL
                     LTNAPGEVSDKQLEELSLRIRH"
     gene            complement(17219..18481)
                     /locus_tag="OY092_001118"
     CDS             complement(17219..18481)
                     /locus_tag="OY092_001118"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HCX1076071.1"
                     /translation="MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFE
                     STDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPI
                     KLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLK
                     LVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPMRILDCKVDRDKEAIK
                     TAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLVRGLDYYTHTAFELMMDNPNY
                     DGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFI
                     VTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELE
                     NNKIDVKNMTTGESETIELDALVEYFKK"
     gene            complement(18942..19817)
                     /locus_tag="OY092_001119"
     CDS             complement(18942..19817)
                     /locus_tag="OY092_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HCX1076072.1"
                     /translation="MKKIEAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSG
                     NITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGWHT
                     NLDIVADNTKEKNPLQGKTIVLDPGHGGSDQGASSNTKYKSLEKDYTLKTAKELQRTL
                     EKEGATVKMTRTDDTYVSLENRDIKGDAYLSIHNDALESSNANGMTVYWYHDNQRALA
                     DTLDATIQKKGLLSNRGSRQENYQVLRQTKVPAVLLELGYISNPTDETMIKDQLHRQI
                     LEQAIVDGLKIYFSA"
     gene            complement(19814..20265)
                     /locus_tag="OY092_001120"
                     /pseudo
     CDS             complement(19814..20265)
                     /locus_tag="OY092_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500248.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
     gene            complement(20277..22466)
                     /locus_tag="OY092_001121"
     CDS             complement(20277..22466)
                     /locus_tag="OY092_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HCX1076073.1"
                     /translation="MNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFR
                     KNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIV
                     DGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQ
                     IRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI
                     ETAIDRIRTEMDRMNIEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSIN
                     DCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHE
                     IAEHGVAAHWAYKEGKKVSEKDQTYQNKLNWLKELAEADHTSSDAQEFMETLKYDLQS
                     DKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIV
                     EIRTSKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQDRSSNIEKGRMMVEAEIKEQGFR
                     VEDILTEKNIQVVNEKYNFANEDDLFAAVGFGGVTSLQIVNKLTERQRILDKQRALNE
                     AQEVTKSLPIKDNIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHR
                     TDCPNIKNETERLINVEWVKSKDATQKYQVDLEVTAYDRNGLLNEVLQAVSSTAGNLI
                     KVSGRSDIDKNAIINISVMVKNVNDVYRVVEKIKQLGDVYTVTRVWN"
BASE COUNT         6935 a         4419 c         3179 g         8201 t
ORIGIN      
        1 aatatgatta tgacaataaa ataaatcagc cttcacaatt gattatgatt ttgccaacca
       61 attaaatgac tgatttcgtg ttagacgcaa agctatttta tttatagaag cgaatcattc
      121 atataaaatt taactttaga tattttacca tattttcaat aaaattataa gcgttaatta
      181 tttatacatt gcttgactta aaaaaatact cttgcctccc catcttaagg ttagcaagag
      241 taaaatcttt ttaattattc ttccatttca gtatttacaa cttcttcaat catgtcccat
      301 tcttcatcag tttcgattgg tactaactta ccaccgtcac ctgactcatc tggttcattg
      361 atcattggta caagctcaat catatcgtct tcatctgatt gagcaccttc ttcagctaag
      421 ataacatact cttttttgaa ttcaggatga taaaattcta aaacttttcg gtataaaact
      481 tcatttccct cttcatcgaa taaagttaat aattcttctt cgttattaat ttctagttgt
      541 gaatcatgat tatgttcagt catagtaaaa tctcctttta atgtagtgaa tctaaatagc
      601 cttgtaaaat aaataccgct gccattttat caatcacttg ttttcttttt tgtcttgaaa
      661 catctgcttc taataatgat cgttcagcag ccattgtgct taatctttca tcccacatca
      721 caatctcaat agaaggataa gcttctaata atttttcttt atatgttaac gaagcttcgc
      781 ctcgaaatcc tattgaatta ttcatgtttt taggtagtcc tattacgact gtacccacat
      841 tatgtttttt aataatgtct actaattggt caatacctaa ttcattattt tcttcattga
      901 ttcggagtgt gtctaatcct tgtgccgtcc aacccattat atcactaatt gcaattccta
      961 ccgttctact accgacatcg agtcctaaaa ttttatgttg taacataaat tatttatttt
     1021 gctcttttaa atagtaagaa acaagctctt ccataataac atctctatca atatgacgaa
     1081 tttgatttct tgcttcattt tggcgtggaa tatacgcagg gtcacctgat aataaataac
     1141 ctacaatttg gtttacggca ttatatcctc gttcatctaa tgttcgataa acattattta
     1201 aaacatctct tacatcttgt gttggaagtt cttcatagtc gaatttcatt gttttatcaa
     1261 agttttccat ttgcgacact cctttaatta caaatataac tcactatcat catacaatat
     1321 tatggctata aattatagat ttttaatgta atctttaata aagcttaatg attttgagat
     1381 attttcaggt tgtgtaccgc caccttgagc catatctgga cgaccgccac ctttaccacc
     1441 aacgattggt gccatttgtt tgataagatc accggcttta acgttatttg ttaaagattt
     1501 agggacagtt gcaaccatcg atactttatc atcaacatta cttgcaagaa tgataattgt
     1561 atcttgtagt ttagatttaa aatcgtccat tgtcgagcga attgctttcg catttggtac
     1621 atccacttca gtaaccaata ctttatagcc attgatttct tcaacttgat cttcaatatt
     1681 acccatttta agtgatgtaa tttctttgtc acgttgctct aattgtttta ataatgcttt
     1741 ttcttcatct tgtaattgtg ttaacttatc gactacttga tcatcagatt tcactttcag
     1801 ctgtgatttc atcgtattaa atttctcttg aatatcttct aaatataaga aagctgcttt
     1861 acctgttaat gcttcaatac gacgcacacc agctcctgta cctgactcac ttactatttt
     1921 gaataagcca atttcagaag tattgcggac atgaatacca ccacataatt caattgaaaa
     1981 tggtgccata tttactacac gcacaacatc accatatttt tcaccgaata atgccattgc
     2041 gcccatttct ttagctgaag caatatccat ttcttgaatg ttaacgtcaa tacctttcca
     2101 aatttcttca tttactaagc gttcaacttg atcaatttca tccttagtca ttggaccaaa
     2161 atgagagaaa tcaaaacgta aacgatctgc ttctactagt gaaccagctt ggttaacatg
     2221 atcacccagt actgatttca acgctgcatg taataaatgt gttgcactat ggttcttttg
     2281 aatgtcacgt cgatcatttt ggttcacttc agcagacact gtagcgccaa catttacttg
     2341 gccaaattgt actactcctt tatgcaagtt ttgaccattt ggtgctttgg ttacttcact
     2401 aacagcaatt tcaaaattgc cattataaac aatacctgta tccgcaactt gtccaccact
     2461 gactgcataa aatggtgttt ccgttaacat gaagtatact gtttcacccg cttcaacttg
     2521 tgaaacttct tcgccattgt atatcaagtg tgttagtgtt gtttgagctg tcgcagtatc
     2581 ataaccaaca aaagtacttg cagatgtaat atttttcaat acttcacttt gaacttgcat
     2641 tgattgagaa ttttgacgtg cttgacgtgc acgatcacgt tgttgttgca tttctgactc
     2701 gaatgttgtc atatcaactt tcaatcctgc ttgcactgct atttcttcag ttaattcaat
     2761 tgggaacccg tacgtatcat acaatttaaa tgcatctttc ccattaattt catttgttgt
     2821 cgctttagct tttttaatta attcatttaa aatcgctaag ccatcttcta atgtttcatg
     2881 gaatcgttct tcttcagact ttataacacg cttaatgaaa tctgcttttt ccttaacatt
     2941 tggataatat ggttccataa tgtctgcaac aatatcaaca agtttgtaca taaatggctc
     3001 attgattcct aacgtttgac taaaacgaac ggcacgacgt aacaatcgac gtaatacata
     3061 tcctctacct tcattggcag gtaatgcacc atcagaaatt gcaaatgcaa tcgtacgaat
     3121 gtggtcagca attactttaa atgccacatc ctgttcgctg tttactaaat attgtttacc
     3181 tgatactttt tcgatttcat tcattatagg cataaataaa tctgtttcat agttagtacg
     3241 tacattttga gaaactgagg ccatacgctc aagccccatg ccagtatcaa tgtttttatt
     3301 aggtaatggt gtgtaactat gatctttatt atgattgaat tcactaaata ctaagttcca
     3361 tacttcaaga tagcgttcat tttctccacc tggatacatt tcttctgccg gatcgtcttg
     3421 tccatatgct tctccgcgat catagaaaat ctcagtgttc ggtcctgaag gcccttcacc
     3481 aatatcccag aagttacctt caatgcgaat aatacgactt tcttcaagcc caatatcttt
     3541 atgccaaatg ttgtatgctt ccatatcttc cggatgaatc gtaacgtaca atttatctgg
     3601 ctccattccc atccatttat cactcgttaa aaattcccaa gcaaattcaa tcgcttcttg
     3661 tttaaaataa tcaccaattg agaagttacc taacatttca aagaatgtat ggtgacgcgc
     3721 tgtgaaacca acattttcaa tatcatttgt acgaatagct ttttgagagt ttacaattct
     3781 tggcttttta ggtgtttcac gtccatcaaa atatttcttt aatgttgcta cacctgaatt
     3841 aatccataat aatgtatcat catcaattgg cactaatggt gcagaaggtt caaccatatg
     3901 tcctttttca acaaagaaat ctagatattt ttgtctaatt tcactcgctt ttaacttttt
     3961 catcatttac acatcctatt tactgttttt aaattaccat tccataaaaa ttgatgacac
     4021 agatagtcga tttgaaaaac tagtataaat caatatcatt ttttattatt aaaaaataaa
     4081 aaacgcccat cctcaaaagg gacgaacgtt atcgcggtac caccctagtt ataaatgcaa
     4141 ttcaacacat ttatcacttt aaatcgacta tacagttgtg cataaagtag cgttcactaa
     4201 tgtttgttgt acttttcacc aaccagtaca tctctgataa acaaatcatt aactactcat
     4261 ctttatacga atttaattct attttagtta catttacgct tgttgtcaac gttctataaa
     4321 gtcatacggc gtgatttctc ccatattaat cattgggtca attttaaaca ttgtagcttc
     4381 cgttaataca tttgtatctg tttttgttga atcagacgta acttcttcac tatcattcga
     4441 tggcattggc gcttctactt gatcatctat tgtcgtttgt gaagctcctg tatcattagt
     4501 tgctgtgttt tctagcattt cttcatcttc tgaattaaaa taatttttca acaatgtaca
     4561 taattgtgtt aaacgcgctt gaccatttgt tttcaatcca atatcaaatg cttctggatc
     4621 accaagtaaa actaaactcg ttttcgctct agttaaacca gtatataata tcggtctttg
     4681 taacattcta aaatactgtt taacaatagg catgataaca ataggaaatt ctgaaccttg
     4741 tgatttatgg attgatgtac aataagcatg cgttaattcc atcatatctt gtttcgtaaa
     4801 tgtaatttca ttaccttcga aatccacaac aagtacatct ttattaaggg cattttcttt
     4861 cgcccaaaaa ataccaacaa taactcctat gtcaccattg aatatgttat catttggcct
     4921 attaacaagt tgtaatactt tgtcaccttt tctaaagact acatcaccaa actcaatttc
     4981 tcgtgtgtct ttctttttag ggtttaaaat atcttgtaaa acttgattta aacgtttaat
     5041 accggcattt cctttataca ttggtgcaag cacttgaata tcagccatag tatacccttt
     5101 attaacagca ctagtaacta ccttctcaac aactgttggt atttggtttg cctgacagtt
     5161 aataaaactt ctatcatgaa aacgctgtgt aatatcaatt ttctgaccca atttcattcg
     5221 atgtgctaat tctataatgc ttgaaccatc ttgttgacga tatacttcag tcagattaac
     5281 tcgtggtata gctttcgatt caattaaatc tttaaatact tgaccaggac ctacagaagg
     5341 caattggtcc tcatcaccta caaatatcaa ttgtgcatct aaaggaactg cacttaaaaa
     5401 ttggtgaaac aaccaagtat ctaccataga catctcatca atgattatga gtcgtgcgtt
     5461 tatttcattt tctaatatat cctctggctt tgtgtcttga ttccaaccta ttaaacgatg
     5521 aatcgtcata gcttctaatc cagttgactc ttgtagtctc ttggacgctc ttcctgttgg
     5581 cgctgctaat acaactggat aatcatcatt gacataatca tcataatcta atgataagcc
     5641 atgaatctca gcatataatt ctacaatgcc tttaattact gtcgtttttc cagttcccgg
     5701 tccaccggtt aatagcatca ccttagaatt gatagccgtt tgcaaagctt ctttttgtga
     5761 agctgcatag ttcacttgat tcgcatcttc tatttcacca atatgcattt gtaaatctga
     5821 ctgttcaatt tctgtaagtt tatttgtatg cgtctttatt ctgaataagt tttgaacact
     5881 tttgatttca gaataataca aacttggaat tgcaacttgt tcattgtcaa taattagtcg
     5941 tttttcctca tttaagtatt gcaacatttc gtctaatttt tcaggttcga tgacctcttc
     6001 atcttgataa tttaatacat caaccgttaa atctataaca acattgatag gcaaatatgt
     6061 atgtccctgt ttaatacatt cttcttctaa cgtatagagc aacgcagctt ttaatcgttc
     6121 attatcgtta taagcgatac caatatttct agcaagttga tctgctttat taaaaccaat
     6181 acctttaata tcataaatca attgatatgg attttggtct aaaatagtca gtgtatcacc
     6241 gagataaaac tgataaattg ccattgaaag tttagggcca aaccctaaat catgtaaacg
     6301 aatcattatt ttttcagatt cttggtttgc tgaaatttgt tctgcaattt gtttctgttt
     6361 ctttttagat aatcccgata ctttttctag cactgaatgg tcatctaaga tatcatttat
     6421 cgcattgtca cctaatgcat taacaatatt ttgagctgtc tttttaccta cacctttaaa
     6481 caaatcactt gataaataac ttataattgc ttctttcgtt tgtggcattt ctttttcaaa
     6541 agtctctgct tttaattgtt taccataacg tggatgatca acaacttgcc ctttaaatgt
     6601 gtagacatcg ccttcaacaa tattcggaag aaaccctaca acagttggca ttgtatcaaa
     6661 gtcttcattt gtttcaatag tatctacttt aagcactgta taaaaattat cactgttttg
     6721 aaacaatatc gcttcaacag tacctttgat cattgaataa tcaaatagtg tagggtctga
     6781 catgctattc ctcctctttc attttagtga atgttttcag cgcatgctga cttaataagt
     6841 gtttagggtc gatagtcaca gcttctttaa aatgagttat ggcttcatca atatcttcat
     6901 ttttcataaa taacgctaag cccaaattgt atcttgcatc aacatgattt ttatcaatcg
     6961 ttaatacatg tttaagttga gttatggctt cattaaacat ttctaattga cataatacaa
     7021 gaccatattg aaattgaact tctgcatctt tgtctttatc tagttccgca gcagtcatta
     7081 aatacggcaa tgccagctta aatgattcta actgattaaa cgccataccg atcatataat
     7141 tacaatcaac ttgttcaatc tctgtttgta atgcttgttg atataattta atagcttctt
     7201 gataacgctg ctgattataa tatacatttg ctagattata aaatactacg ccattcttcg
     7261 gatctattgt taaagctttt tggaaaaagc gctctgcctt ttcaatctca ttcgcatcag
     7321 caagtacgat accggcatta atataatttt caataattgt aggatcttct tcgatatttc
     7381 cgaacaatgc ttgtaacgct tcttctattt ttccattttg tatgtattga taaattgttt
     7441 gttgatctat catttacgaa cctcatttct catcaattat aacatcttga taaattgtat
     7501 gtctcgaatc acttaacaac gaataaaata taatctaata tcatcttcat tcatgaaaaa
     7561 gcgggaatgg aatagaaatg ctaaagaacc attaacggtt tattatgtaa tggttcttcc
     7621 acattagcca ccactattat gtacttaaaa ataggaatac ataattagac tcatgcatag
     7681 ggagtgggac agaaatgata tttttacaaa attaatttgt ttaccccaac ttccattgcc
     7741 ggttgaattt ctttacgaaa ttctctatgt tggggccccg ccaacttcca ttgcctgttg
     7801 aaattggggt tccaatttct ctgtgttggg gccccgccaa tataacattg tagagcctag
     7861 gacattgtga tgtcccagac tctatcatca tgaattattc tcatcaaaaa ctgtctttcg
     7921 tcatttccaa cgctgaaact tcaaataagt aatttattgt tgccattgtt tatacaacat
     7981 aatttaattg accttcattt ttgaacacat cgtcaattgt tgctccacca agacacacat
     8041 caccttgata aaaaacaact gcttgtccag gtgtgattgc tcttactggc tcagcaaaag
     8101 taacacgtag tgcatggtcg ttttcacgtt tcacaaaaac tttcgtatct ttttggcgat
     8161 atctaaattt agctgtacat tcaaaacctt gatctaagtc attatcttct ggatttacaa
     8221 atgaatagtc tgaagcaatt aagtaatcac tgtataatgc atcgtgatgg aatccttgtt
     8281 ctacatataa aacattatct tttagatttt taccgacaac aaaccaagga tcgccatctc
     8341 cacctatacc taaaccatgt ctttgtccta ttgtgtaata catcaaccca ctatgtttac
     8401 ccattttctt accatcaagt gttatcatat cacccggttg cgcaggtaaa tattgagata
     8461 aaaatgtttt aaagtttttt tcgccgataa aacaaatacc tgtagaatct tttttcttag
     8521 cagtaactag tccttgttct tcagcaattc gacgcacttc actcttttcg atgtcgccaa
     8581 ttgggaacat cacttttgaa agttgttgtt gggataattg attcaagaag tatgtttgat
     8641 ctttattatt atctacacca cgtaacattt caacatgacc atcttcatga cgatgtatgc
     8701 gtgcgtaatg ccctgttgct acataatctg cacctaaatt catcgcatga tctaaaaagg
     8761 ctttaaactt aatttcttta ttacacataa cgtctgggtt tggagtacga ccttttttat
     8821 attcatctaa gaaatacgta aagactttat cccaatattc tttttcaaaa ttaacagcgt
     8881 aatatggaat gccaatttga ttacacactt caataacatc gttgtaatct tcagttgcag
     8941 tacatacgcc attttcgtca gtgtcatccc agtttttcat aaatatgcca atgacatcat
     9001 aaccttgttc ttttaagacg tgagctgtta cagaactatc tacaccgcct gacataccaa
     9061 cgacaacacg tatatcttta tttgacaatt atgactcctc cttaaattta aaatatattt
     9121 tatgaatttc agctacaatt gcattaattt cattttcagt agtcaattcg ttaaaactaa
     9181 atcgaatcga atgatttgat cgctcttcat cttcgaacat tgcatctaaa acatgcgacg
     9241 gttgtgtaga gcctgctgta catgcagatc cagacgacac atagatttgt gccatatcca
     9301 acaatgttaa catcgtttca acttcaacaa acggaaaata tagatttaca atatggcctg
     9361 tagcatccgt cattgaacca tttaattcaa atggaatcgc tctttcttgt aatttaacta
     9421 aaaattgttc ttttaaattc attaaatgaa tattgttatc gtctcgattc ttttctgcta
     9481 attgtaatgc tttagccatc ccgacaattt gtgcaagatt ttcagtacct gcacggcgtt
     9541 tcaattcttg ttcaccgcca agttgaggat aatctaatgt gacatggtct ttaactaata
     9601 atgcaccgac accttttggt ccgccaaact tatgagcagt aatactcatt gcgtcgatct
     9661 caaattcgtc aaacttaaca tcaagatgtc caattgcttg aaccgcatca acatggaaat
     9721 atgcatttgt ctcagcaata atatcttgaa tatcataaat ttgttgcact gtgccaactt
     9781 cattatttac aaacataata gatactaaaa tcgtcttatc tgtaattgtt tcttcaagtt
     9841 gatctaaatc aatagcacct gtatcatcaa catctagata tgttacatca aaaccttctc
     9901 gctctaattg ttcaaaaaca tgtaacacag aatgatgttc aatcttcgat gtgataatgt
     9961 gattacccaa ttgttcattt gcttttacta tgcctttaat tgccgtatta ttcgattctg
    10021 ttgcaccact cgtaaatata atttcatgtg tatctgcacc aagtaattgt gcaatttgac
    10081 gtcttgactc atctaaatat ttacgcgcat ctcttccctt agcatgtatt gatgatggat
    10141 taccataatg cgaattgtaa atcgtcatca tcgcatctac tacttcaggt tttactggtg
    10201 tggtcgcagc ataatctgca taaatttcca tgtttggaca ctcctcacaa ttttatcaat
    10261 gttccaataa tagcacctta catactattt ttctactttt ctgtttaact ttatttataa
    10321 tgtttttaat tatattttac cattttctac acatgctttt cgataggctt ttttaagttt
    10381 atcgctttat tcttgtcttt tttataaatt ttagtatttg cagatatttt ttcattcgta
    10441 aaatgtaacg tactattatt ttggttatga gcaatttaat atttatctgg ttattcgatt
    10501 ggtatacttc ttatatcata caaaaggaag gacgatacaa aaatggcgat taaatattca
    10561 gcattaaacc ttgtcccaat tcgagaaggt gaagatgaac gaacagcaat taatgatatg
    10621 gttaagctcg cacaacattt agacgaatta tcatatgaaa gatattggat tgctgaacac
    10681 cataacgctc ccaacctagt aagttcagcg actgctttat tgattcaaca tacgttagaa
    10741 catacgaaac acatacgtgt aggttctgga ggaatcatgt tacctaacca tgctccatta
    10801 atcgttgcgg aacaatttgg cacgatggca acattatttc caaatcgtgt cgatttagga
    10861 ttaggacgtg cacctggaac agatatgatg accgcaagtg cattaagacg agatcaacat
    10921 gatggtgttt ataaatttcc ggaagaagtt tcattattac aacaatattt cggtcccgct
    10981 caccaacaag catatgttcg tgcttatcca gcagtaggta aaaatgtgcc tttatatatt
    11041 cttggttctt caacagattc tgcacattta gctgctcgta aagggcttcc atatgtgttc
    11101 gctggacatt ttgcacctca acaaatgaaa gaagctatcg aaatttacaa aacgttattt
    11161 gaaccttctg atgtattaga cgaaccttat gttattgtat gtttaaacac aatcgttgct
    11221 gaaaatgatg aagaagcaca atatttagct tcatctatgg cacaagttat ggttagtatc
    11281 actcgtggca gaatgcagcc cgttcaaccg ccaacacatg atctacaaaa tatattaacg
    11341 ccgagagaat atgcgatggc tatggaaaga cagaaaatat cattaatagg ttcagaaaat
    11401 actgttcaac aaaaaattca agattttatg gaaacttatg gtgaagtcaa cgaaattatg
    11461 gcaataagtt atatttatga taaagatatg caattagact cttatcgtcg gttcaagaat
    11521 gttataaatc agataaatga aaaaaacact ttataatgtg ataaataaac taagtgaaag
    11581 tatgtatcca taatattaat aaaaataaac agtaacagca ttttgaataa aagatgtctt
    11641 tattgttcaa tcatttattt tagtaatgat tcaaattcac ttaaaattct aatgcaaata
    11701 tgaaagcgcc ccttcaactt tacactgtgt tagtgtttat ttgatggggc gctttcaaaa
    11761 tattgaaaag catatccaaa atttaaagaa atttatttct ctttatcttc attttctttt
    11821 ttctcttcgt tattcgatcc tgtatattca tttatcttat cttttacatt tttaacttgt
    11881 tcattatcgc tatttttaaa tttttctact gcgtctttag ctttatccat aaaactcata
    11941 ttaatcgctc ctcttatatt taattagttt aattgaactt attttttaag tttatcaatt
    12001 gcatcagtta ttttgttttt agcattttca acaacttctt ttgctttacc agtcgcttta
    12061 tcttgctgac cttctttttc taattctttg ttatcagtaa cgttacctac tgtttcttta
    12121 acatttcctt taaattgatc gaacttactt tcgtctgcca tagtgaaacc tccttggatg
    12181 tatatattta tataccacta aggaggttcg ctaaacatta taatatgaag tttttatgtt
    12241 atagtatagt atttatacga ttaaatataa aacatgtatc cgtctaaatc ttcgcttgta
    12301 tctacatatt ccgctaaata tttcaatgtt gtattatcta aaacatctct cactgcatct
    12361 ctcatgcgaa tccatagttg tttttgcgca ggtggttctg attcaatact ttcaacaaat
    12421 gtaattggac cttccaacag tcttataata tcccctgctg agatttcttc cgctggcact
    12481 cttaattggt atccaccttt agcaccgcgt acacttcgaa ttaaccccgc atttcttaaa
    12541 ggacctacaa gctgttctaa atataaatca ctcaaattat tttcttcagc aattgacttt
    12601 aatgatatac atccttgccc ctctttttta gcaagagaaa tcatcaatgt aagtccatat
    12661 ctccctttag tagaaatttt cattgtataa cctcacttaa ttcgaatatt gatattccca
    12721 ttttagcatt ttttgagtta agatagtata agaaaggtgt gacaaatgtg agtacagaac
    12781 cattagcatc gagaatgcgc ccaaaaaata tagatgaaat catttcccaa caacatttag
    12841 ttggaccaag aggcattatc agaagaatgg ttgatacaaa aaaattaact tcaatgattt
    12901 tttatggtcc acctggtata ggcaaaacaa gtattgccaa agcaatttcg ggcagtacgc
    12961 aatataaatt cagacaattg aatgctgtaa ctaacactaa aaaagatatg caacttgttg
    13021 ttgaagaagc taaaatgtct ggtcaagtta tcttgttatt agatgaaata catcgactag
    13081 ataaagctaa acaagacttt ttattacctc atttagaaaa tggcaaaatc gtcttgatcg
    13141 gtgctacaac ttcaaatcct tatcatgcta tcaatccagc gattcgttca agagcgcaaa
    13201 ttttcgagtt atatccttta aatgacgaag atgtgcgcca agcgttaact cgtgcaatag
    13261 aagatgatga gaatggtttg aaaacatatc aacccaaaat tgatgaagat gccatgacct
    13321 acttttctac acaaagccaa ggtgatgttc gtagtgcgtt aaatgcattg gaattagctg
    13381 tattaagcgc agataatgac aaagacggtt atcgacatgt tacattgcaa gatgctaaag
    13441 actgtttaca aaaaggtgca tttgtaagtg ataaggatgg tgacatgcat tacgatgtta
    13501 tgagcgcttt ccaaaaatct atccgtggta gcgacgtcaa tgccgcttta cattatttag
    13561 cacgattaat tgaagctgga gatttaccta caatagttcg acgattactt gtaattagct
    13621 atgaggatat aggcttagcc tcacctaatg ctggtcagag aacacttgct gctattgaat
    13681 cagcagaacg tctaggttta ccagaagcta gaattccact aagccaagca gtaatcgaac
    13741 tatgcttatc acctaagtca aattcagcaa tgagtgccat tgatagtgca ttgtccgata
    13801 ttagaaacgg tcatgtgggc caaattccaa accatttaaa agatggacat tatcaaggtg
    13861 ctaaagatct aggccgatct attggttaca aatatccaca ccaatatgtt aatggctatg
    13921 tttcacagca atatttacct gataaactta aaaacaaaat ttattatgaa ccaaaaacga
    13981 catctaaaag tgaacaacaa cttaaagaaa tatataacaa cttacttaaa caaaggccgt
    14041 aaaaataaga ttaaatcgat tacctttgat attttagcta taatcaaatc aaaactgact
    14101 agtacacgag gcatattcta ctatgcttgc gaactagtca gttttagttt tatggtgcgg
    14161 ttacacttgc cttacgttga aaattatgac tttcaaaatt aattattgcc ctttgtcttt
    14221 aatgcgacga actggaatat cttttaatac gtcattcacc acataacttg cacaaattaa
    14281 tccaacaaca cttggcacaa aggcatttga agaaggtggc atttgtcctt ttcgattgat
    14341 agcattttta tctccaacta tatcttttac atcttctctt atgacaattg gactttcatc
    14401 tgaaaataca actggaatcc ctttacgaat tcctagtttt ttcaattttt gacgaataat
    14461 tttggccatt ggatcggtat gtgttttaga gatatctgaa attgtaaaac gtgttggatc
    14521 tgttttattt gcagcaccca tactggaaat cactttaatc cctcggtcaa gacactcttt
    14581 cattaagtgt actttgtaca ttattgtatc acttgcatct acaaaataat ctatatcgta
    14641 attatcgaaa atttcttcat atgtctcttc tgtataaaac atatgtaaag gtgtgacttt
    14701 acaatctgga ttaattaatt taatacgttc ttccatcaaa gaaactttac tttgtcctac
    14761 cgttgtagtt aaagcatgta attgtctgtt tacatttgta atatcaacat catctttatc
    14821 aattaatata atatgaccaa tattcgttct tgctaatgct tcagcagcaa atgaaccaac
    14881 acctccaacg ccaagtatga caacagtttg ttgcttcaat aaatctaaac cttgttgtcc
    14941 aatcgctagt tcatttcttg aaaattgatg tttcattatt ttacctcttt cactgattta
    15001 tacataagta catagtaact taaaatttta tatttagcat tattgctttg attatttttc
    15061 aaaaattcaa cgaagaaaca tttattaaac gctattaaac ccaactaatt ctttattaaa
    15121 aacttaaaga aacgcataaa aatacgcaag acaaagtctt gcgtatcgat agagtccgta
    15181 ttgccgtagt tataatagct tgatcattcg gcctgttata tacaggtggg tgccctgttt
    15241 cttgttttgt acgtccttca tataaggcgt gtacgctgca agaaaaccca ttgggctccc
    15301 ttgatcaaag agtgttaggc ccaaattaaa aagcaaactt acgaacaact cagatgacta
    15361 tcttatgatg ttatattacc acataattaa aattaatgaa attataacaa accaaagttt
    15421 attgattttt taaaatttag tgacgaattc gcaaagaaag ttcttctaat tgtttatcag
    15481 aaacttcacc aggcgcattc gttaataaac atgtagcaga tgctgtttta gggaatgcga
    15541 ttgtatctct caagtttgtt ctattagtca ataacatgac taatcggtct aatcctaatg
    15601 caataccgcc atgtggtggt gcaccatatt taaatgcatc tagtaagaag ccgaactgtt
    15661 cttgtgcttg ttctttagta aatccaagaa cttcgaacat tttttcttgt aactcaccat
    15721 catgaattct gattgaaccg ccacctaatt cataaccatt taatactatg tcataagcat
    15781 ttgcctcagc ttcttctggc gcagtgccaa gcttagcaat atcagcttct tttggagatg
    15841 taaatggatg atgtgctgca acgtaacgtt tcgcatcttc atcatattct aataatggcc
    15901 aatctgtcac ccataagaag tttaattttg tttcatcgat taaacctaat tctttagcta
    15961 atttgacacg taatgcacct aaactttgtg caacgacatt tggtttgtct gcaacaaaca
    16021 ttactaagtc accagcttca gcaccagtta atgtaagtaa tgtttcaaca ttttctgttt
    16081 caaagaaacg tccaattgga cctgtcaaac catcttccac aactttaacc cacgctaatc
    16141 ctttagcacc atagatgttt acaaattctg ttaaagcatc catatcttta cgagtatatt
    16201 gttcagccgc acctttagcg acaattgctt taatttcacc atcattttca acagtatctt
    16261 taaatacttt aaagtccata tcacgtccta attgagaaac gtcaattaat tccatttcaa
    16321 aacgcgtatc tggtttatca gaaccatagc gacgcatcgc ttctttatat gtcatgcgtg
    16381 ggaaagcgcc attaatttca acgcctttaa cttctttaac aactttttta agcatttctt
    16441 cacccatttg catcacatct tcttggtcta caaaactcat ttcaatatcg acttgtgtaa
    16501 attcaggttg acgatctgca cgtaaatctt cgtcacggaa gcattttacg atttggtagt
    16561 atttgtcaaa tccactaatc atcaataatt gcttaaataa ttgtggtgat tgtggtaatg
    16621 cataaaattc accatcatga acacgagatg gtactaaata gtcacgtgca ccctcaggtg
    16681 ttgacttcgt tagtactggt gtttcgatgt caaagaaacc ttcatcatcc aaatattgac
    16741 gaatagaacg tgtaatttga tgtctcattt taaatgtttg cgctaactct tgacgacgta
    16801 aatctaaata acggtatttt aatcgaatat tttcatcaac gttaacattt tcttcattta
    16861 tagaaaatgg tggtgtctca gatttattaa tcactttaat atttgtaact tgtacttcaa
    16921 cttggccagt tttaatttta ggattaactg tttcagggtc acgcttcgta actgtacctt
    16981 gaacttctac aacatattca gaacgtactg tttcagcaat tttcaatgcc tcttctgaaa
    17041 atgcaggatt aaacacgact tgtacaattc cttctctatc tcttaaatca acgaaaatca
    17101 atccacctag gtcacgacga ttgttaaccc atccttttaa tgtaatttct tgtcctaaaa
    17161 atgcttcagt aactaatcca caataagttg ttctcttact catattttaa cgccctctct
    17221 acttcttaaa atattcgact aatgcgtcta attcaattgt ttcagattca ccagttgtca
    17281 tatttttaac atcgatttta ttattttcta attcttgatc accaataacg attgtaaact
    17341 tggcacctaa acggtctgct tgtttcattt gtcctttaat tttacgctgt aagtagtctt
    17401 tatctgcttt aataccatta tgtctcaaat gatttaataa cttcacagca tatcgatctg
    17461 cttgatcacc cattgtaaca atgaataaat ctaagttttc ttcaatatct aattcgatac
    17521 cttcttcttc aagtgcaagc aataatcgtt ctatacttag cgcaaaacca atacctgttt
    17581 cacttggacc atctagcaat tctaataaac cattataacg gccaccacca caaagcgttg
    17641 taatggcacc atcatagtta gggttatcca tcattaattc aaatgctgta tgtgtataat
    17701 aatccaatcc acgaactaag ttaggatctt caatatatgg aatacctaaa tcatctaaat
    17761 aagcttttac ttgttcataa tatgccttag attcctcatt taagaaatca gtgattctag
    17821 gtgcagtctt aatcgcttct ttatcacggt caactttaca atccaaaatt cgcatcggat
    17881 ttgtatgcaa acgtgattga caatctgaac aaaattcatg aattactggt tcaaagtgtt
    17941 tcactaacgc ttcgttatat tcttttcgag acgccatatc ccctacacta ttaataacaa
    18001 gctttaaatg ttttaatcca aatgattgat aaatatgcat aaccatagct aatacttctg
    18061 catctacgct aggattttca gcaccaatag cttctacacc aaattgatta aattgacgat
    18121 agcgcccttt ttgcttacgt tcatatctaa acatcggtcc attgtaataa agtttaattg
    18181 gttggtttgg attaccttgc attttatgtt caatatatga acgtacaact gcagctgttc
    18241 cttcaggtct taatgtaata cttctatcgc ctttatcttt aaatgtatac atttcttttt
    18301 gtacgacatc ggttgaatca ccaacacctc ttgcaaaaag atctgtactt tcaaaaattg
    18361 gtgttcttat ttctttataa ttataaaatg tcattaattc atctaattga ttttcaatgt
    18421 aacgccattt ctttgaatct tcaggtaaaa tatcctgcgt ccctctaggt attttaatca
    18481 ttttgacatc tccctcggca aactatttta tttaattacc tttttaaaac taaaactata
    18541 tacgatcact taactttgca tgataaatca taattttaaa agcaaaagaa aaagcccttg
    18601 cacagcctga aactgcacaa gggacgaata tccgtgttgc caccctcatt ggtttaaaaa
    18661 acatgcctaa ttgtaatcat cattactttt tataagcgtg cattaaataa acccactcaa
    18721 aacgtttaac gtacgtttaa cggctttact tttcataaag cacctcttct tgtgttcaat
    18781 gtatataaac tactcagcat aatctttcag tctatggatt atattcctac acaatcttag
    18841 ttagattgct acctatttca tttaccattt caagaatact aacggtttta gttataaaat
    18901 tcaatatcaa tgataactac tttcacatat ttttgcaagc cctacgcaga aaaataaatt
    18961 ttaaggccat caacaattgc ttgttctaaa atttgtctat gtaattgatc tttaatcatc
    19021 gtttcatcag ttgggttact aatataacct aattctaata aaacagcagg aacttttgtt
    19081 tgtcttaaca cttgataatt ttcttgtctt gaaccgcgat tagaaagtag acctttcttc
    19141 tgaatcgtag cgtctaacgt atctgctaaa gctctttgat tatcatgata ccaataaact
    19201 gtcattccat ttgcattaga tgattctaat gcatcattat gtatactcaa ataggcatcg
    19261 cctttgatat cacgattttc tagtgaaaca tatgtatcgt ctgttcttgt catcttaaca
    19321 gttgcgcctt ctttttctaa agtacgctgc aattcttttg ctgttttcaa cgtatagtct
    19381 ttttctaaac ttttatattt agtattgctt gaagcaccct ggtcactacc tccatgacca
    19441 ggatcaagca ctattgtttt accttgcaaa ggatttttct ccttcgtatt atccgcgaca
    19501 atatctaaat ttgtgtgcca tccagctatc caaccttttt cattactgga tgtatcttca
    19561 acttcaatcc atttacctac tttaccaatc tttttaaaat ggtcaccttt ctcaacttta
    19621 tatatgactg gatacgcagc gtttggacct gtacgtaatt cagcattttc agttatcgtg
    19681 atgttcccac tatcttcact attgctattc agcaataaaa ataaaaagat gataaataag
    19741 acaaaggcaa tcactactat tagagtacgt ttatttttaa gacccttttt agataaccat
    19801 gcctctattt ttttcattga attttgccgt cctgactttc ataaataata gtgactggac
    19861 catcattatt tatgctaaca ttcatgtgtg ttccaaattc acctgttttc acagtaagac
    19921 catacgctcg tagcgcatca ttaaaatact cataaatttt taccgcttga tcaggatttt
    19981 tagaatttga gaaacctgga cggttacctt ttttacatct gcatagagag taaattgtga
    20041 aactgatagt atttcaccat tcatttgttg gatattaaag tttaatttat tattgtcatc
    20101 ttcaaataat cttgcattag caattttctt tgcaattaca tctgcatctt gctctgtaga
    20161 gttctgaccg ataccgacta ataaacaata tccttttttg atttgattat ttaatgtatc
    20221 attcgtcacc gatgcttctt taactctttg tacaactact ttcatatttt gcacctctag
    20281 ttccaaactc ttgttactgt ataaacatca ccaagttgtt tgatcttttc taccacacga
    20341 taaacatcat tcacgttttt caccatgaca ctaatattta ttattgcatt tttatcaata
    20401 tctgaacgtc ctgaaacttt aattaaattg ccggctgtcg agctaacagc ttgtagtact
    20461 tcattcaaca agccatttcg gtcatacgca gttacctcta aatcaacctg atatttttga
    20521 gttgcgtctt ttgattttac ccattcaaca ttaattagtc gttcagtttc gttcttaata
    20581 tttgggcaat cagtgcgatg tactttaata ccgtgacctt tggtgatata acctacaata
    20641 tcatcacctg gtataggatt acaacatttt gacaacttga taagtacatt ttctaaacct
    20701 tctacataga caccactatc agtaatgatg ttgtctttaa taggcaatga tttcgtaact
    20761 tcttgtgctt catttaaagc acgttgttta tctaaaatac gttgtctttc agttaattta
    20821 ttaacaatct gtagggatgt cacgccgcca aatcctacag ctgcgaataa atcatcttca
    20881 tttgcaaagt tatatttttc attaacaacc tgaatatttt tctctgtcaa aatatcttcg
    20941 actctaaatc cttgctcttt tatttcagct tcaaccatca ttcggccttt ttcaatatta
    21001 gatgaacgat cttgtttttt gaagaaactt ttaattttac ctttggcact agacgattta
    21061 acaattttca accaatcacg acttggtcca tatgaatgtt tactagtacg tatttcaaca
    21121 atatcgcctg tttgtaaaat atagtcaatt ggtacaattt tgccattcac cttggcacca
    21181 atcatcttat tacctacttc actgtgaatc gcataagcaa aatcaatcgg cacagcacca
    21241 tatggcaact caataacatc actcgctggg gtaaatgcgt atactttgtc actctgtaag
    21301 tcatatttta aggtttccat aaattcttga gcgtcagacg atgtatgatc cgcttcagct
    21361 aattctttta accaatttaa cttattttga taagtttgat ctttttcact tactttttta
    21421 ccttctttgt aagcccagtg tgctgcaaca ccatgctcag caatttcgtg catatcaaac
    21481 gttcgtattt ggatttcgag cgggtctcca tttggaccta ctactgtagt atgcaatgac
    21541 tgatacaaat tttgtttagg cattgcaata taatctttaa aacgtcctgg catcggtttc
    21601 cataacgtat gcaccaaccc aagtatcgca taacaatcat taatagaatt gacaataaca
    21661 cgtatcgcca acaaatcaaa aatttgatca aattgttttt tctgcttcat cattttccga
    21721 taaatactgt aaatatgttt aggtctacca tttatatcgc cttcgatatt cattcggtcc
    21781 atttcagtac gtattctatc aatagccgtt tcgatatacg cttcacgttc actacgtttc
    21841 ttcttcatta aattgactat tctaaaatat tgcacattat caatataacg aagagctgta
    21901 tcttctagtt cccatttaat tgtattaata ccaagacgat gtgctaaagg tgcataaatt
    21961 tctaatgttt ctcgagaaat tctaatttgt ttttcacgcg gcatggcttt caaggtacgc
    22021 atattatgta atctgtctgc taatttcacc aaaattacgc gtacatcttt ggcaatcgca
    22081 ataaataact tgcgatgatt ttcagcttgt tgttcttctt ttgagcggta ttttactttt
    22141 ttaagcttcg tcacaccatc aacaattcga gcaacttctt cattgaacat ttcttttaca
    22201 tcttcaaatg tatacggtgt atcttcaatt acatcatgca aaaaacctgc gacaatcgtc
    22261 ggtccgtcta atcgcatttc tgttaaaata cctgcaactt gtataggatg cataatgtat
    22321 ggtaatccgt tttttcggaa ctgaccttta tgtgcttcat aagcaatatg atagcttttt
    22381 aaaacatact catattcatc tgctgacaaa tatgattttg ctttgtgaag aacttcatct
    22441 gcactatatg gatattcgtt gttcattata tgatacaccc cattcatatt tattacttcg
    22501 ccttaaacaa tgatttaggt actcttgttg aatagtattt gtcccacacc aatcatacgt
    22561 ccgtcgacga taaatattta tcctgtcgtc attaatcgta atattaattt tacttgagcg
    22621 agtttaattt gtatactatt cctactttta aaacttttac aaaaattcga cctaaatcta
    22681 ctgtttcatt ttttaaatat tagttctatg atactacaat ttatgaaata aata
//
LOCUS       DAKPJH010000034        22519 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.034, whole genome shotgun sequence.
ACCESSION   DAKPJH010000034 DAKPJH010000000
VERSION     DAKPJH010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22519
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.034"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..100)
                     /locus_tag="OY092_001122"
     CDS             complement(<1..100)
                     /locus_tag="OY092_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding protein"
                     /protein_id="HCX1076074.1"
                     /translation="MKNKLIAKSLLAIAAIGITTTTIASTADASEGY"
     gene            complement(359..865)
                     /locus_tag="OY092_001123"
     CDS             complement(359..865)
                     /locus_tag="OY092_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076075.1"
                     /translation="MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYI
                     SLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVV
                     LEHLIQWFLVYFAIYQAVNEKMGINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIF
                     NYRMRSYK"
     gene            1538..1933
                     /locus_tag="OY092_001124"
     CDS             1538..1933
                     /locus_tag="OY092_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000739582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl peptide receptor-like 1 inhibitory
                     protein"
                     /protein_id="HCX1076076.1"
                     /translation="MKKNITKVIIASTVIATGLLTHSNDAKAFFSYEWKGLEIAKKLA
                     DDEKKDEERADRLIKDAEKERTYTGKTVEDLYVIAKKLGKGNTIAVVRIIDGGKNGYY
                     TFDITRPLEEHRKNIPVVKNGEIDSITWY"
     gene            1914..1985
                     /locus_tag="OY092_001125"
     CDS             1914..1985
                     /locus_tag="OY092_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076077.1"
                     /translation="MQLLGIKKHTELNSCTPNVRKKC"
     gene            complement(2293..2622)
                     /gene="ecb"
                     /locus_tag="OY092_001126"
     CDS             complement(2293..2622)
                     /gene="ecb"
                     /locus_tag="OY092_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement convertase inhibitor Ecb"
                     /protein_id="HCX1076078.1"
                     /translation="MKKNFIGKSILSIAAISLTVSTFAGESHAQTKNAETVKKYNEYQ
                     TNFKKQVNKKVVDAQKAVNLFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLV
                     LKYNTLK"
     gene            complement(2816..2983)
                     /locus_tag="OY092_001127"
     CDS             complement(2816..2983)
                     /locus_tag="OY092_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076079.1"
                     /translation="MKRIVLLRNVIVDGPIWLNHVDYLVKSVLLKSIKLRFQEVRKIE
                     NLVKSMNRIHI"
     gene            complement(3112..3615)
                     /locus_tag="OY092_001128"
     CDS             complement(3112..3615)
                     /locus_tag="OY092_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HCX1076080.1"
                     /translation="MSKWIIVSDNHTESGVLYQIYEMHPDADVYLHLGDSEFAYDDTE
                     LSLFNRVKGNCDFYPEFENEAVAKCNDVYAFYTHGHLYQVNRTRHLLAEQARELGCVF
                     AFYGHTHVAKYEYINGVHVINPGSISQSRSSMEETYAEVLIDDQTLHGTVNFKNRHHE
                     TISHTTF"
     gene            complement(3608..4195)
                     /locus_tag="OY092_001129"
     CDS             complement(3608..4195)
                     /locus_tag="OY092_001129"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HCX1076081.1"
                     /translation="MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGST
                     FEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLL
                     NKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGDNGFGYDPIFYVPKL
                     DKTMAQLSKEEKGQISHRRNAINLLEAYLAGDQHV"
     gene            complement(4207..5007)
                     /gene="racE"
                     /locus_tag="OY092_001130"
     CDS             complement(4207..5007)
                     /gene="racE"
                     /locus_tag="OY092_001130"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HCX1076082.1"
                     /translation="MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPR
                     PGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTA
                     IMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTI
                     TSIVIHQTLKRWRNSESDTVILGCTHYPLLYKLIYDYFGGKKTVISSGLETAREVSAL
                     LTFSNEHASYTEHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND"
     gene            complement(5243..6058)
                     /gene="sdhB"
                     /locus_tag="OY092_001131"
     CDS             complement(5243..6058)
                     /gene="sdhB"
                     /locus_tag="OY092_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HCX1076083.1"
                     /translation="MTDQPVKDTPQHETQSKPKQKTVKLIIKRQDTSDSKPYEETFEI
                     PYRENLNVIACLMEIRRNPVNIKGEKTTPVVWDMNCLEEVCGACSMVINGRARQSCSA
                     IVDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEK
                     KRQTAYELSKCMTCGVCLEVCPNVTENNKFVGAQAISQVRLFNLHPTGSMTKDERLNA
                     LMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRETTFHMFKSFFGSDHEVE"
     gene            complement(6058..7824)
                     /gene="sdhA"
                     /locus_tag="OY092_001132"
     CDS             complement(6058..7824)
                     /gene="sdhA"
                     /locus_tag="OY092_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HCX1076084.1"
                     /translation="MAEKHLIVVGGGLAGLMSTIKAAEKGAHVDLFSVVPVKRSHSVC
                     AQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVM
                     FNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRAYEVDGLVTKYEGWEF
                     LGIVKGDDDSARGIVAQNMTTAEIETFGSDAVIMATGGPGIIFGKTTNSMINTGSAAS
                     IVYQQGAIYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKY
                     PDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEK
                     FTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSL
                     LSAIYGGTVAGPNAIDYIANIDRSYTDMDESIFEKRKAEEQERFEKLMAMRGTENAYK
                     LHRELGEIMTANVTVVRENEKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQL
                     WNMLVLARVITIGAYNRNESRGAHYKPEFPERNDEEWLKTTMASFQGAFEKPQFTYDD
                     VDVSLIPPRKRDYTSKSKGGKK"
     gene            complement(7876..8490)
                     /locus_tag="OY092_001133"
     CDS             complement(7876..8490)
                     /locus_tag="OY092_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b558 subunit"
                     /protein_id="HCX1076085.1"
                     /translation="MAQSKNEFYLRRIHSLLGIIPIGAFLVVHLLVNHQATQGAEAFN
                     KASNFMESLPFLIIVEFLFIYIPLLYHGLFGIHIAFTAKENVGHYSIFRNWMFFFQRV
                     SGILTFIFIGIHLWQTRLQKAFYGKEVNYDLMHETLQHPGWAIFYIICIIAVVFHFAN
                     GLWSFLVTWGGLQSPKSQRVFTWVSLIVFLVISYIGVTAIIAFM"
     gene            complement(8814..10595)
                     /gene="uvrC"
                     /locus_tag="OY092_001134"
     CDS             complement(8814..10595)
                     /gene="uvrC"
                     /locus_tag="OY092_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499646.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HCX1076086.1"
                     /translation="MEDYKQRIKNKLNVVPMEPGCYLMKDRNDQVIYVGKAKKLRNRL
                     RSYFTGAHDAKTTRLVGEIRHFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSY
                     PFIKITKEKYPRLLVTRTVKQGTGKYFGPYPNAYSAQETKKLLDRIYPYRKCDKMPDK
                     LCLYYHIGQCLGPCVYDVDLSKYAQMTKEITDFLNGEDKTILKSLEERMLTASESLDF
                     ERAKEYRDLIQHIQNLTNKQKIMSSDKTIRDVFGYSVDKGWMCIQVFFIRQGNMIKRD
                     TTMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPRNLDKEMIQSVVDTKIVQPARG
                     PKKDMVDLAAHNAKVSLNNKFELISRDESRTIKAIEELGTQMGIQTPIRIEAFDNSNI
                     QGVDPVSAMVTFVDGKPDKKNYRKYKIKTVKGPDDYKSMREVVRRRYSRVLNEGLPLP
                     DLIIVDGGKGHMNGVIDVLQNELGLDIPVAGLQKNDKHQTSELLYGASAEIVPLKKNS
                     QAFYLLHRIQDEVHRFAITFHRQTRQKTGLKSILDDIEGIGSKRKTLLLRSFGSIKKM
                     KEATLEDFKNIGIPENVAKNLHEQLHK"
     gene            10761..10856
                     /locus_tag="OY092_001135"
     CDS             10761..10856
                     /locus_tag="OY092_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076087.1"
                     /translation="MLDYHLTFIDLLIPPFSSRKQYDDLSFNFLY"
     gene            complement(10919..11233)
                     /gene="trxA"
                     /locus_tag="OY092_001136"
     CDS             complement(10919..11233)
                     /gene="trxA"
                     /locus_tag="OY092_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HCX1076088.1"
                     /translation="MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAA
                     DYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDK
                     HL"
     gene            complement(11406..13754)
                     /locus_tag="OY092_001137"
     CDS             complement(11406..13754)
                     /locus_tag="OY092_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HCX1076089.1"
                     /translation="MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVV
                     FQMEETDEIAQIYNKHRLPSLSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQF
                     KTFYNQLVEEDEGVKYPILDDKMNQLPVLTDLFQQINETCDTYDLYDNASYELQGIRS
                     KISSTNQRIRQNLDRIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQS
                     ASGQTLYIEPSSVVEMNNQISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQ
                     LDFLIAKARYSRSIKGTKPIFKEECTVYLPKAYHPLLNRETVVANTIEFMEDIETVII
                     TGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFKNVYCDIGDEQSIEQSLST
                     FSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTH
                     YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINK
                     AKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSKQYQQFQNYE
                     KSLIEEAKEKANQKIKAATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEA
                     KSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLEIVNDEEAIVQMGIIKMKLPIEDLE
                     KKQKEKVKPTKMVTRQNRQTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH
                     GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK"
     gene            complement(13764..15476)
                     /gene="polX"
                     /locus_tag="OY092_001138"
     CDS             complement(13764..15476)
                     /gene="polX"
                     /locus_tag="OY092_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HCX1076090.1"
                     /translation="MTKKDVIKLLEQIATYMELKGENTFKISAYRKAAQSLELDERPL
                     DEISDVTDLKGIGKGVAEVINDYRETGESQYLQQLQEEVPEGLIPLLKIQGLGSKKIA
                     KLYKELNIVDKASLQVACENGKVSELSGFAKKTEQNILEAVKQLGAKKDRYPIDQMRR
                     LNQEIIDYIDTLNYIDQYSSAGSFRRFKEMSKDLDFIISTDNPKAVQQQLLNIPNKVK
                     EVAVGNTKVSLELAYDDETIGVDFRLIEPSAFYHTLQHFTGSKEHNIRIRQLAKARDE
                     KVSEYGIEQADGTLIQYDSEAKIYEHFNVNFIPPAMREDGSEFDKDLSNIITLDDING
                     DIHMHTTYSDGAFSIRDMVEANIAKGYKFMVITDHSQSLRVANGLQVERLLRQNEEIK
                     ALDKEYSEIDIYSGTEMDILTDGSLDYDDEILAQLDYVIGAIHQSFNQSEEQIMERLA
                     NACRNPYVRHIAHPTGRIIGRRDGYKPNIEQLMALAEETNTVLEINANPHRLDLNADI
                     VRKYPNVKLTINTDAHHTNHLDFMNYGVATAQKGFVTKDRVINALSREAFKDFIENNI
                     KLKK"
     gene            complement(15549..16070)
                     /locus_tag="OY092_001139"
     CDS             complement(15549..16070)
                     /locus_tag="OY092_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HCX1076091.1"
                     /translation="MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFY
                     KSIVERLIVFIPYPKTTAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTF
                     DKIIAYQNIHIFSRAMGMIVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLI
                     FHIPYLSAFTINL"
     gene            complement(16071..16337)
                     /gene="zapA"
                     /locus_tag="OY092_001140"
     CDS             complement(16071..16337)
                     /gene="zapA"
                     /locus_tag="OY092_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HCX1076092.1"
                     /translation="MAQFKNKVNVSINDQLFTIVGEDNPEHIRYVAHLVDDKIKELGY
                     KAAGLDTSRKAILTAVNIMHEKVLLEEENRRLKQQIHKLQQREQ"
     gene            16712..17650
                     /locus_tag="OY092_001141"
     CDS             16712..17650
                     /locus_tag="OY092_001141"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HCX1076093.1"
                     /translation="MANIVFKLSDKDITTLMSRISFDTENLPQGMKARAKYQNTTVNI
                     YQSGKVMFQGNHAEAVSQELLPQHSQLNTNKTKKKNMANSFLEQSLMYDQFNCIGSDE
                     AGSGDYFGPLTVCAAFVTKEHVLILKTLGVDDSKKLTDTKIVELAEQLVTFIPHSLLT
                     LHNEKYNIQQAKGWTQVKMKAVLHNEAIKNVLEKIDSSQLDYIVIDQFAKREVYSHYA
                     LSDIPLPKKTKFETKGESKSLAIAVASIISRYAFVTYMDQISKNINMTIPKGAGAKVD
                     VIAAKIIKKYGLSRLDTISKKHFKNREKAQKILKPL"
     gene            complement(17953..20355)
                     /locus_tag="OY092_001142"
     CDS             complement(17953..20355)
                     /locus_tag="OY092_001142"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HCX1076094.1"
                     /translation="MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKN
                     LVVGFVKSKEKHPDADKLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLPGG
                     IKIKRAKLRGERSEGMICSLQEIGISSNYVPKSFESGIYVFSESQVPGTDALQALYLD
                     DQVMEFDLTPNRADALSMIGTAYEVAALYNTKMTKPDTTSNELELSANDELTVTIENE
                     DKVPYYSARVVHDVTIEPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQ
                     DAIGSQQIVVRQANEGEKMTTLDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKE
                     HTSNIVIEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYA
                     NGKVLKDRVSSGELGAFITPIDITADKINRTIGFDLSQNDIVTIFNQLGFDTEINDDV
                     ITVQVPSRRKDITIKEDLIEEVARIYGYDDIPSTLPVFEKVTSGQLTDRQYKTRMVKE
                     VLEGAGLDQAITYSLVSKEDATAFAMQQRQTIDLLMPMSEAHASLRQSLLPHLIEAAS
                     YNVARKNKDVKLFEIGNVFFANGEGELPDQVEYLSGILTGDYVVNQWQGKKETVDFYL
                     AKGVVDRVSEKLNLEFSYRRADIDGLHPGRTAEILLENKVVGFIGELHPTLAADNDLK
                     RTYVFELNFDALMAVSVGYINYQPIPRFPGMSRDIALEVDQNIPAADLLSTIHAHGGN
                     ILKDTLVFDVYQGEHLEKGKKSIAIRLNYLDTEETLTDERVSKVQAEIEAALIEQGAV
                     IR"
     gene            complement(20355..21413)
                     /gene="pheS"
                     /locus_tag="OY092_001143"
     CDS             complement(20355..21413)
                     /gene="pheS"
                     /locus_tag="OY092_001143"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HCX1076095.1"
                     /translation="MSEQQTMSELKQQALVDINEANDERALQEVKVKYLGKKGSVSGL
                     MKLMKDLPNEEKPAFGQKVNELRQTIQNELDERQQMLVKEKLNKQLAEETIDVSLPGR
                     HIEIGSKHPLTRTIEEIEDLFLGLGYEIVNGYEVEQDHYNFEMLNLPKSHPARDMQDS
                     FYITDEILLRTHTSPVQARTMESRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGL
                     VVDKNVKMSDLKGTLELLAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCN
                     VCKHTGWIEILGAGMVHPNVLEMAGFDSSEYSGFAFGMGPDRIAMLKYGIEDIRHFYT
                     NDVRFLDQFKAVEDRGDM"
     gene            complement(21794..>22519)
                     /locus_tag="OY092_001144"
     CDS             complement(21794..>22519)
                     /locus_tag="OY092_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HCX1076096.1"
                     /translation="SAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVIT
                     QLFAIEPARLDQQIIAYAQEIFEINMKVAESLSGTVTPQGFFAIIEKPQYDISKAQQV
                     LLIDRVQDPGNLGTLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQD
                     LDTFITQFNGPVYGTALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIP
                     IYGKAESLNVAIAGSILLYHLKG"
BASE COUNT         7116 a         4242 c         3101 g         8060 t
ORIGIN      
        1 cgtatccttc gctcgcatct gctgttgacg caattgtagt tgtagtaata ccaattgccg
       61 ctattgctaa taaagatttt gctatcaatt tatttttcat gttaattatc ctccaaatca
      121 ttatcttaca tttattaagt tatcctattt atacaacttt tgaaattaac taattattaa
      181 ttaactataa acactttata atatagacaa aatatagcta tctatcttgt gactcatcag
      241 cacttataca ctagtcaaaa aattcatgcc tctacttttt cgaatttcaa aaataaaacc
      301 acacaacaaa aaagacacca tttgaatgtt ggtgtctgat ggtataattt catagatttt
      361 atttgtaact tctcattcta tagttaaata ttgtgaccca gctaatgatt aacgttggta
      421 gaattactaa attcaaatta gacacgtcaa aaaagacaga ttggaaattg tcgatattaa
      481 tatcattaat gcccattttt tcatttactg cttgatagat cgcaaagtaa actaagaacc
      541 attgaattaa atgttctaaa acgacaacct ctgtcaaatc tacattcttt tttctaaaaa
      601 gtaatctaac tataaataat tggaatatac ttgaaatcaa gatcaatata atacccatta
      661 agaaaaaact accaaaatca attgtgataa attgaataat accataaata attacggcag
      721 atattgccag tgaaatatat cctataaaga taaataccac acccataaag agtgtcttta
      781 agaacagaaa aggcttcttt ctatttgtaa ccaaatagct caatatacaa agtagtaata
      841 gaattgttaa aattttaatt atcatcgttt gacctcaata tatttattta tatctttatt
      901 attgaccacg aaaaaataac aatcacttaa gtgattgcca ataatactca atgcctactc
      961 tatagtaatc ttggcacgtg attttacact attttatcta tttaaaaatg taagtgttga
     1021 attatgctta cttcgaaaat gcataattca actaaatagt ataattttta acttatatat
     1081 taatcataac atatcaacct taattagaat atatctctta tttctttata agtaaaatta
     1141 tacatattaa ttacttctct actatgaatc atttctttgt tttataaaca ttaattatca
     1201 aaacagctac atgtataaca atttagagtg tttacctacc caatattgca aacaaaatgt
     1261 agagaaatat aaatatcgtt ttaacaataa aaatcattca atcatagttg agtgacgttt
     1321 actactatta ttatactatc aacaaattca ataatacctc aaataaaaat aataacatca
     1381 aattcatcat tattcttttt cggttgcatt aaaccttatt aatttgcact taattttaat
     1441 taatgaagtg ttaactggta aatgtatgaa accgtttgta aaatagcagt gtactcgcat
     1501 tagtaagtac aaatctattt tacagggaga acttattatg aaaaaaaata ttacaaaagt
     1561 aattattgca tctacagtta tcgctacagg tcttctaact cattcaaatg atgctaaagc
     1621 tttctttagt tatgaatgga aaggtttaga aattgctaaa aaattagcag atgatgagaa
     1681 aaaagatgaa gaacgtgctg atagattaat taaagacgcc gagaaagaaa gaacttatac
     1741 aggtaaaacg gttgaagatt tatatgtcat tgctaaaaaa ttaggtaaag gtaatactat
     1801 agctgtagtg agaattatag atggtggtaa aaacggttac tatacgtttg atatcacgcg
     1861 tccattagaa gaacatagaa aaaatattcc cgtagttaaa aacggcgaaa tcgattcaat
     1921 tacttggtat taaaaaacac actgaattaa atagttgcac gccaaacgtt agaaaaaaat
     1981 gctaacgttt tggcgtgctt ttttatatgc tgcaacttcc aatttattta gcatctttac
     2041 gactgcttaa taaagcacgt atgattaaca cggttgccac tatatccgtt acaattttta
     2101 tgattgttaa tacattcgat ttccttttca caatagccac ctcgcttgat caaaacataa
     2161 acaactattg cattcacttt taaataatta tttttcccaa taagctcacc attcaaatga
     2221 acacaatatt ataaactaat tatacctttg aatatagcaa aaagccacac tctaaagcat
     2281 ggcttctatc aattatttta aagtattata ttttaaaact agatcgattt gtctttgtaa
     2341 ttttttcttt tcatagctgt gttggaaatg aattaaatta acagctcttt gtgctttacg
     2401 gtgtgttgca acagttcttg tacgtttgaa caagtttaca gctttttgtg catccacaac
     2461 ttttttattt acttgttttt taaagtttgt ttgatactcg ttatattttt ttacagtttc
     2521 agcgttttta gtttgtgcat gagattcacc ggcaaacgtt gataccgtta aactaatagc
     2581 agctatgctt aaaattgatt tcccaataaa attctttttc ataattaata acacctatcc
     2641 tcaaatattt attctgtata tatttataat aatagagata tacaaaaaac tacattaact
     2701 atttattaac taaacattaa tatttgtgtc actacatttc tgaatttcaa gaattttgct
     2761 actccatatt ttaaccacca aattattgat ataatttatg cctttagaaa tccttttaaa
     2821 tatgtatgcg attcatgctt ttaactaaat tttcaatttt cctgacttct tggaatctta
     2881 attttatact ttttaacaat acacttttaa ccaaataatc aacatgattc aaccatatag
     2941 gaccatcaac aatcacattc ctcaaaagta caattctttt cataacataa atgtgttatt
     3001 cattccagtt atcttataaa attgtcagaa atacttttaa acaaatattc atgtcacgac
     3061 ctcctagtta aatcagtcta taaactaaaa aaagtcatag ctactttcta tttaaaaagt
     3121 agtatgactg attgtttcgt gatgtcgatt tttgaaattg acagtgccat gtaaagtttg
     3181 atcatcaatc aagacttcag catatgtttc ttccattgaa cttctagatt gagatatact
     3241 tccaggatta atcacatgaa caccattaat atattcatat tttgccacat gtgtatgtcc
     3301 ataaaaagca aatacacaac ctaattcgcg tgcttgctca gctaataaat gtcttgttcg
     3361 attgacttga tataaatggc cgtgagtata aaaagcatac acgtcgttac actttgcgac
     3421 cgcttcattt tcaaattctg ggtaaaaatc acaattgcct tttactctat taaataagct
     3481 aagttccgta tcatcatacg cgaattctga atctcctaaa tgtaaatata catctgcatc
     3541 tgggtgcatt tcataaattt gatataaaac gcctgattca gtatggttat cactcacaat
     3601 aatccattta gacatgttga tcacccgcaa gataagcttc taataaatta attgcatttc
     3661 gtctatggct aatttgacct ttttcttctt tagaaagttg cgccatggtt ttatctaatt
     3721 tcggcacata aaatatcgga tcataaccaa aaccattatc gccatatttt ccatctgcaa
     3781 tttcacctga aaccgtacct ttaaatactt ttgtttccat atcagggcca ctcatactta
     3841 tgacacaaac aaattgcgca cgacgatcag ttgtattacc aagcttattt aataattttt
     3901 caatatttgc ttcatcgctt ttattttcac cagcataacg tgccgagtat atacctggct
     3961 caccatttaa tgcaaaaact tcaagtccac tgtcatcagc tatgaccgtt ttattcaatg
     4021 cttttgctgc agcttctgat tttaatatag cattttcttc aaatgttgat cctgtttctt
     4081 ccacatcaaa atctggtatt agttctgaaa tacctattac gtggtaatct ggaaatatca
     4141 ctttaaagtc atttattttc ccttgattat tcgatgcaat aacaatctct ttcattaaaa
     4201 atcctcctag tcattcactg atatacgttc cacattgaca gataaattta accactcttt
     4261 gataatgtta gtaatgtgag taggatcacc tgttgcaaaa aatcgatgat ctggatgttc
     4321 agtataactt gcatgttcat tactaaatgt tagcaatgca ctaacttcac gagccgtttc
     4381 taatccagac gaaatcactg tctttttacc accaaaataa tcatagataa gtttatagag
     4441 caatggatag tgggtacatc ctaaaatgac agtatcagac tcactattac gccaacgttt
     4501 cagtgtttga tgaatgacaa tgcttgtaat tgttggatca ctatatctca tttgttctac
     4561 aagtggcaca aaacctggac aggcaacgcc atgtacctct acatgtggat tgatacgttt
     4621 aatatgcgta cgatatgctt cagatttaat tgtgccttcc gttcctagta ctaatacatt
     4681 ttgatttcta gtagtcatta ttgctgttct agcacctggt tcaattacgc caatcactgg
     4741 gattgataag gtcttttgta aatattctaa agctacagca gttgctgtat tacaagcaat
     4801 cacgagcatt tttatatcaa attccattaa tttacgagcg atttcaactg tatattgttt
     4861 tacttgttct cctggtcttg gcccatatgg gcatcgccca atatcaccta agtaataaat
     4921 cgtctcattt ggcaactgac gcataatttc tttagctact gtcaaacctc cgacaccaga
     4981 gtctattaca cctattggtt tattcatatt cggtcatcct tacttttaat ttaattttta
     5041 gtttatcata actaagcatt ggattttagt attatgcact gtgtttacca tttttgtcat
     5101 tataatattt attttaaatc agcccactat catattgtca tgtaatctgc ttattaaaaa
     5161 aatcccttcc aagttattgt gtatctccat tcaatttaat tttgaaagga acataacatt
     5221 ttaactcaaa agggattaat ttttattcta cttcatggtc tgaaccaaag aaagatttaa
     5281 acatgtggaa tgttgtttct ctgttcattg ctgcaatgga tgttgttaat ggaatacctt
     5341 tagggcaagc attaacacag ttttgtgaat taccacactg ctgtaagcca ccagtaccca
     5401 ttaatgcatt taaacgttca tctttagtca tagatcctgt tgggtgcaaa ttaaacaaac
     5461 gaacttgcga gattgcttgc gcaccaacga atttattatt ttcagtaaca ttaggacaaa
     5521 cctctaaaca tacaccacat gtcatacatt tagataattc ataagctgtt tgacgttttt
     5581 tctctggcat acgtggtccc ggacctaaat catacgttcc atcaattggg atccatgctt
     5641 tcatacgttt taagttatcg aacattctag aacgatcaac ttgtaagtca cggataactg
     5701 ggaatgtatt cataggctct aatcgaatag gctgttctaa ttgatcaaca atcgctgaac
     5761 atgattgtct tgcacgacca ttgataacca ttgaacacgc accacatact tcttctaaac
     5821 agttcatgtc ccatactact ggcgttgttt tttcgccttt aatattaact ggattacgtc
     5881 taatttccat taaacatgca atgacattta aattttcacg atacggaatt tcaaacgttt
     5941 cttcatatgg ttttgaatca cttgtatctt gacgtttaat aattaatttt actgtttttt
     6001 gtttcggttt agattgtgtt tcatgttgtg gtgtgtcttt tactggttgg tcagtcatta
     6061 ttttttaccc cctttagact tacttgtgta atcacgttta cgaggtggta ttaaactcac
     6121 atcgacgtca tcataagtaa actgtggttt ttcaaatgca ccttggaatg aggccattgt
     6181 tgtttttaac cactcttcgt cattacgctc tgggaattct ggtttataat gggcaccacg
     6241 tgattcatta cgattatatg ccccaatcgt aatcacacgt gcaagtacta acatattcca
     6301 tagttgacga gtgaagaata ccgcttggtt actccaagtt tgtgtatctt ccatatctat
     6361 attttcataa cgcttcatca attcaacaat ctttttatct gtttctaaca gtttttcatt
     6421 ttcacgaaca actgttacat tagctgtcat aatttctcca agttcacgat gtaatttata
     6481 agcattttca gtaccacgca tagccattaa tttttcaaaa cgttcttgtt cttcagcttt
     6541 acgtttttca aaaatacttt catccatatc agtatatgaa cgatcaatat tagcaatata
     6601 atcaatggca ttcgggcctg caactgtacc accgtaaatc gctgacaata atgaattggc
     6661 acctaagcgg ttaccaccat gttgagagaa gtcacattct ccagctgcaa ataacccttt
     6721 aatatttgtc atttgatcat aatctacata tagaccaccc attgaatagt ggacagctgg
     6781 gaaaatcttc attggtactt tgcgtgggtc atcaccagta aatttttcat aaatttcaat
     6841 gataccacct agttttacat ctaactcatg tggatcttta tgtgacaaat caagatatac
     6901 catgttttcg ccattaatac ctaatttttg gttaatacat acatcgaaaa tttcacgcgt
     6961 tgcgatatca cgaggtacta agttaccata atcaggatat ttctcttcta agaagtacca
     7021 aggcttacca tctttatatg tccaaattcg tccaccttca ccacgtgctg attcactcat
     7081 tagtcgaagt ttatcatcac cagggattgc agtaggatga atttgaatga actcaccatt
     7141 agcataaata gcgccttgtt ggtaaacaat ggaagccgct gatcctgtat taatcattga
     7201 gtttgttgtt ttaccgaaaa taataccggg gccacccgtt gccataataa ctgcatctga
     7261 accaaatgtt tcaatctcag cagttgtcat attttgtgca acgatacctc ttgcactatc
     7321 atcgtcacct ttaactatgc caaggaattc ccatccttca tacttcgtaa ctaatccatc
     7381 tacttcatat gcacgaactt gttcatccaa tgcatataat aattgttgtc cagttgttgc
     7441 ccctgcatat gctgttctgt ggtgtaatgt accaccgaaa cgtctaaaat ctaatagacc
     7501 ttcatttgtt ctattgaaca ttacgcccat acggtctaat aaatgaataa ttttaggtgc
     7561 tgcctctgtc atcgctttaa caggtggttg gtttgcaagg aagtcgccac catacactgt
     7621 atcatcaaag tgaatccaag gagaatcgcc ttccccttta gtattgaccg caccattaat
     7681 gccaccttgg gcacaaacag agtgcgaacg ctttactggt acaactgaga acaaatctac
     7741 atgtgcacct ttttctgccg ctttaattgt tgacattaag cccgctaggc cacctccgac
     7801 aacaataaga tgtttctctg ccataaaaat ttcactcccc taaattttca atctatattt
     7861 gttaaatgcg atgtattaca taaaggcaat aattgcagta acaccaatat acgaaataac
     7921 taagaatacg attaatgaaa cccatgtaaa tactcgttgt gattttggag attgaagtcc
     7981 tccccaagta actaagaatg accataagcc atttgcaaag tggaacacaa cagcaataat
     8041 acaaataata taaaatattg cccatccagg atgttgcaat gtttcgtgca ttaaatcgta
     8101 attcacttct ttgccgtaaa atgctttttg taaacgtgtt tgccataaat ggataccaat
     8161 aaagataaat gttaagatac cactcactct ttggaagaag aacatccagt ttctaaaaat
     8221 cgagtaatgt ccaacatttt cttttgctgt aaatgcaatg tgtataccaa acaaaccgtg
     8281 atataacaac ggaatgtata taaataaaaa ttctacaata attagaaatg gtaatgattc
     8341 cataaagtta gatgccttat taaacgcttc agcaccttgt gttgcttggt gattcactaa
     8401 taaatgaacg accaaaaatg cacctattgg gataatacct aataacgagt gaatacgtct
     8461 tagataaaat tcattttttg attgagccaa aaggagtccc ccctgtgaac gaatatttaa
     8521 tttattgagc tatttatatt aaacgtacgc ttaaccccct aaagtgatat cgtttctagc
     8581 gttgtcatta tcattaagcg aaacatttta aagacaaata cacactgtac gatcaccaaa
     8641 ctgcatgtcg aacaatgtaa catttggatt cgatatttaa aattgcttgt gatgataaac
     8701 tttctcattt agaaaacgct tccacgtaca ttcaaaaaaa taactttgtt aaccatattg
     8761 taacattatt tcatatattt tggggcatga gaatgattct cacgcccagt aatttattta
     8821 tgcaattgtt catgtaggtt ctttgcgacg ttttcaggaa tacctatatt tttaaaatct
     8881 tcaagtgtag cttccttcat tttcttgatt gaaccgaatg aacgtaataa taatgtttta
     8941 cgtttgctac cgataccctc tatatcatca aggattgatt tcaagcctgt cttttgacgt
     9001 gtttgcctat gaaatgtgat tgcgaatctg tgaacctcat cttggatacg gtgcaacaaa
     9061 taaaatgctt ggctattttt cttcagtggt actatttctg cactagcgcc atataataat
     9121 tcagatgttt ggtgtttatc atttttctgc aaacctgcaa cagggatatc aagacctaat
     9181 tcgttttgta gcacatcaat aaccccgttc atatgtcctt taccaccatc tactattatt
     9241 aaatcaggta atggtaatcc ttcgtttaaa acgcgagaat atcggcgtct tactacttct
     9301 ctcattgatt tgtaatcatc tggaccttta accgttttga ttttatactt tctataattt
     9361 ttcttatctg gtttaccgtc gacaaatgta accattgctg acactggatc cacaccttga
     9421 atattagaat tatcgaatgc ttcaattcta attggtgttt gaattcccat ttgtgttcca
     9481 agttcttcaa tagctttaat tgttctggac tcatcacgtg atattaattc aaatttatta
     9541 tttaaagata ctttagcgtt atgtgcagct aggtcaacca tatctttttt gggacctcgc
     9601 gcaggttgaa cgattttagt gtccacaaca gattgaatca tttctttatc caaattacgt
     9661 ggtacatgaa cttccttagg taaaatatgt tggtttaagc tataaaattg tccaataaat
     9721 gtataaaatt cttcttcttc tgtttgctgt aatggaatca tcgttgtatc tcgctttatc
     9781 atattacctt gtcgtataaa gaaaacttgg atacacatcc atcctttatc aacgctataa
     9841 ccaaagacat cacgaatcgt tttatctgat gacataattt tttgtttgtt agttagattt
     9901 tgaatatgtt gaattaaatc tctatattct ttagcccgtt caaaatcaag tgattcactt
     9961 gcagttaaca ttcgctcttc taaacttttt aaaattgttt tgtcttcccc attcagaaaa
    10021 tcagtaattt ccttcgtcat ttgtgcgtat ttactcaaat caacgtcata tacacatggt
    10081 cctaaacatt gtccaatatg gtaataaaga cataatttat ctggcatctt atcacatttg
    10141 cgatatggat atattctgtc taataacttt ttagtttctt gagcagaata tgcattcgga
    10201 tacggtccga aatatttgcc agtaccttgt tttacagttc tcgtcactag tagtctagga
    10261 tatttttcct tcgtaatttt aatgaatgga taacttttat catcctttaa taatatatta
    10321 tatcttggtt gatattgttt aatcagattc aattccagta aaagtgactc tgtttcactt
    10381 gacgtgacaa taaattcaaa atgccgtatt tctccaacca gtctcgttgt tttagcatca
    10441 tgagcacccg taaaatatga tctcaatcga tttcttagct ttttagcttt gccaacatat
    10501 atcacttgat cattacgatc tttcattaaa tagcagcctg gttccatagg tacgacattt
    10561 aatttatttt taattcgttg cttatagtct tccaataata tccccccttc taattttaaa
    10621 atgaatgatg ctacaaaagt gcttcaaatt tatcaccact aattctagct cataatcaac
    10681 atcttcgagt atgacttttc atgcacatca tgtaaaattg aacattgttt tatcaaacca
    10741 actgctacaa atctatcagc atgctagatt atcatttaac gttcatagat ttattaatcc
    10801 caccattctc aagtcgtaaa caatatgatg acttatcatt caacttttta tattaaaaac
    10861 acaaacaaaa actggagcaa ttcattaaag aaatgcccca gtcgtcattg gttgtaactt
    10921 ataaatgttt atctaaaact tcagctaagt tttcttttgg ttggaaacca acaactttat
    10981 caactggttg accgtcttta aagacgatta atgttggaat actcatcact tcatatttag
    11041 ctgcagtaga tggattttca tcaacatcta attttaaaat gtcagcttta ccttcatagt
    11101 cagctgctaa ttcttctaat accggagcga tcattttaca tggaccacac catgttgccc
    11161 aaaaatctac taattgtaca ccagattcta cttttgaatc gaaatctgca tctgttactt
    11221 ttacgattgc cataaatgcc aatcctcctt aattattatt atgatgttca aattatatca
    11281 gataacatgc ttcatgtatt tctatttgct caatttttat gcttatttca aataacatgt
    11341 ttgaaatgta ttcttgttgc tttacattat tttaactgca gctatttaat ttatcaaatt
    11401 ataatttatt ttagtgttgc aacggtaacg ccaaatccac cttcgcttgg cataccacct
    11461 ctaaagtcac taacactttt atgctttttc aaatgttgtt gtacaccttt ttgaagtgca
    11521 cctgtacctt taccgtgaat gatataaact tgttcgtaat tacttaaaac tgcttgatct
    11581 aaatattgat ctagttcaat taaagcatcc tcataacgat agcctcgtaa gtctagttca
    11641 gttttaattg tttgacggtt ttgacgtgta accattttcg ttggcttaac tttttctttt
    11701 tgttttttct ctaaatcttc aataggtaac ttcattttaa taattcccat ttgaacaatt
    11761 gcttcttcat cattgacaat ttctaaaact tcaccctttt gaccgtaaga taatactttt
    11821 acttcatcac cagcaacaat tttatcgtat ttttgctttt gtacattttg ctttatagat
    11881 ttcgcttcat aatgatcatc taatcgtttc ttcttatcaa tcaattcatg ttctttaaca
    11941 tctgcacctt tttgttcacg caattgtctt aagtctttaa taatatcgtc agcttctttt
    12001 gttgcagctt taatcttctg atttgctttt tctttcgctt cctctattag agacttttca
    12061 taattttgga attgttgata ctgcttagat aaatcatcat gcacttgctc cgcttctttt
    12121 acaagacggt ccagttctaa cctctgtgtc tctacacgtt tgtaattacg ctctaatgat
    12181 tcaatcattt catttatttc tttttcatca gtaccaatca tcgtcttagc cttattaata
    12241 atattcaaac taagacctaa ctttttagaa atgtcaaaag catttgaacg acccggcaca
    12301 cccattaata acttatacgt tggactcaaa gtatctacat caaattctac actcgcattc
    12361 ataacgcctt ctcgattata actatatgct ttaagttcag gatagtgcgt cgttgccatt
    12421 actagagaac caatttttct aacatgatct aaaatgctca ttgctaatgc agcaccttca
    12481 cttggatctg tacctgcacc taattcatca aataaaacta aactatgttt gtctgcatgc
    12541 tttaaaattt caactatatt cgtcatatga gatgaaaaag ttgataatga ttgttctatt
    12601 gattgttcat ctccgatatc gcaatataca tttttaaata tacttaactg actaccatca
    12661 agtgttggaa tcaacaatcc tgattgagcc ataacaataa ttaaacctaa tgtttttaat
    12721 gttactgttt taccacctgt attcggtcct gtaataatta ccgtttcaat atcttccata
    12781 aattcgatgg tattagctac aacagtctca cgatttaata atggatggta tgctttaggt
    12841 aaatatacag tacattcctc tttaaatatc ggctttgttc ctttaatact tctactatat
    12901 ctcgcttttg cgattaaaaa atctaactga cccatgactt gttctgccac aagtagtgca
    12961 tctttgtccg cagccacata accagttagt tgcgttaaaa tgcgttcttt ttcaattgct
    13021 tcatcatgac gtaatcgact aatttgatta ttcatttcaa caactgatga tggctcaata
    13081 tacaatgttt gtcctgaagc agattgatca tgtacaatcc cattaaaatc ttgtcgatat
    13141 tcagctttga caggtataac gtttctttca ttcctaactg ttacaattgc atctgataat
    13201 tttttctgat ttgcttggct tttaacaata cggtccaaat tttgtctaat acgttgattc
    13261 gtgctagaaa ttttacttct aatcccttgc aattcataac tcgcattatc atataaatca
    13321 tacgtatcgc atgtttcatt tatttgttga aaaagatcgg ttaacacagg taattgattc
    13381 atcttgtcat ctaatattgg gtatttaaca ccttcatctt cttcaaccaa ttgattataa
    13441 aatgtcttaa attgattttg tacttgaatt aatcttttta tcaagttaag ctctgataca
    13501 tttaaaacgc cgccaatatc agcgcgatga atgaatgctg atactttaga taagccactc
    13561 aagcttggta aacgatgctt attatagatt tgagcaatct catccgtttc ttccatttga
    13621 aaaacaaccg tttcaaaatt agtagctggc atcatttgat tgaccttttc caagcctaag
    13681 tcactaattg tttcattggc aacgagtgat tttatttttt caaattctaa gacgtctaat
    13741 gttttttgtc tcataaaatc cctctatttc ttaagtttta tattattttc aataaagtct
    13801 ttaaaagctt cacgcgataa tgcgttaatc actctatctt ttgttacaaa tcctttttgc
    13861 gcagttgcta cgccataatt cataaaatct aaatgatttg tatgatgcgc atcagtgtta
    13921 atagttaatt tcacatttgg atatttacga acgatatcag cgttcagatc caatcgatgt
    13981 ggattggcat taatttctaa tactgtattc gtttcttcag ctaatgccat taattgttca
    14041 atattcggtt tataaccatc tcttctacct ataatacgcc ctgttggatg cgctatatgt
    14101 cgcacgtatg gattgcgaca tgcattagct aatcgttcca taatttgttc ttctgattgg
    14161 ttaaagcttt gatgaatagc tccaattaca taatcaagtt gtgctaaaat ttcatcatca
    14221 taatccagcg agccatcagt taatatatcc atttctgtac ctgaataaat atcaatttca
    14281 ctatattctt tatctaaagc cttaatttct tcgttttgtc ttaaaagtct ttctacttgt
    14341 aagccattag caacacgtaa actttgtgaa tgatcagtaa ttaccatgaa tttataacct
    14401 tttgcgatat ttgcttctac catgtctcga atagaaaacg caccatcact atacgttgta
    14461 tgcatatgaa tatcaccatt aatatcatct aatgtaatga tattacttag atctttatca
    14521 aattcgctac catcttctcg catagcaggt ggtataaaat tcacattaaa atgttcatat
    14581 atcttggctt cactatcata ttgaattaat gtaccatcag cttgttcaat tccatattca
    14641 cttacttttt catcacgtgc tttagcaagt tgtcgaattc ttatattatg ttcttttgac
    14701 ccagtaaaat gctgcaatgt atgataaaaa gcacttggtt caattaatcg aaaatcgaca
    14761 ccaatcgttt catcatcata cgctaattct aatgaaactt ttgtgttccc cactgcaact
    14821 tcttttactt tattgggaat atttaataat tgctgctgca ctgcttttgg gttatcggta
    14881 cttattatga aatctaaatc tttgctcatt tctttaaaac gacggaagct tcctgcagat
    14941 gaatattgat cgatataatt taatgtatct atataatcaa tgatttcttg attaagtctt
    15001 ctcatttgat caattggata tctatctttc ttagcaccaa gttgtttcac agcttctaat
    15061 atgttttgtt ccgttttctt agcaaatccg cttaattcac taacttttcc attttcacaa
    15121 gcaacttgaa gtgacgcttt atcaacaata ttcaactctt tatatagctt agcaattttc
    15181 ttgcttccaa gtccttgaat tttcaaaagt ggaataagac cttccggaac ttcttcctgt
    15241 aattgctgta aatactgaga ttcaccggtc tcacggtaat cattgattac ttctgcaaca
    15301 cctttaccaa tgccttttaa gtccgttaca tcagatattt catctaatgg tcgttcatct
    15361 aattcaagac tttgagctgc ttttcgatac gctgatattt taaaagtatt ttcccctttt
    15421 aattccatat aagtagcaat ttgttctaat agtttgataa catctttttt tgtcataata
    15481 acactccata aaaagaagac caggacgtat cattaatata tacctttgtc ctgacctctt
    15541 atgataattt ataaattaat ggtgaaagcc gataaatatg ggatgtgaaa aatcaatgaa
    15601 tgactcacaa tagatatttt aagctgatgt tgtaatgctt cgttaggata taatgccaat
    15661 agatataacg taaagtgtaa gacaattatc gtcataaaca caccaactat cattcccatt
    15721 gcacgactga aaatatgaat gttttgatac gctattattt tatcaaaagt tacgataatt
    15781 agatacaaaa tgaacttaca aaacaatgta atcattaaaa aagctacaat cgcttcaaat
    15841 cgattttgta gatgattaaa atgaaacgca aaagttgtat taaatgctgt tgttttagga
    15901 tatggaataa atacaattaa tctttctaca atagatttgt aaaattgact ggcaatccac
    15961 aatgatacaa tcgttgcact caaatgtatc atagataacc aaaaacctcg tctgaatcca
    16021 acgatgacaa aatacacaaa gaaaatgatt atgataaaat caatgaccat ttattgctca
    16081 cgctgctgca atttgtgaat ttgttgtttc aaacgtcgat tttcttcttc tagtagtact
    16141 ttttcatgca taatattcac agcagttaat attgcttttc ttgaagtatc taaacctgct
    16201 gctttatacc ctaattcttt tattttatca tcaactaaat gtgctacata tcgtatgtgc
    16261 tctgggttat cttccccaac aattgtaaaa agctgatcat taattgatac atttaccttg
    16321 tttttaaact gtgccattta taatttctcc tgatcctttt tttaaaatct aaattcacgt
    16381 tataaaatat gactggatag tttgtctgaa tttgatacta atattgttat attgcaatta
    16441 tgataaaaca acaacacaat ctctatagat gacttaatgt tctttttata atgaaatgaa
    16501 ataatgtaaa gaattttcta ttcaatactt tatcatgttt aaattgtgtc actataacat
    16561 tttcataaac attatacatg accactatgt attttgtaag tatccgcaat taattcttta
    16621 caacatatat aaatgtttct gacgttatta tcatttatga tatgattatt tttgctaatg
    16681 ataatgaaat tatatgaaag gatttacaca aatggcgaat atcgttttta aattgtcgga
    16741 taaagacata acgacattaa tgtcacgaat ttcttttgat actgagaatt tacctcaagg
    16801 tatgaaagca cgtgcaaagt atcaaaatac aactgtaaat atttaccaat caggtaaagt
    16861 catgtttcaa ggtaatcatg cagaagctgt gtctcaagaa cttctaccgc agcattctca
    16921 attgaatact aataaaacta aaaagaaaaa tatggctaat tcttttcttg aacagtcttt
    16981 aatgtatgat caatttaact gtattggtag tgatgaggct ggaagtggcg attactttgg
    17041 tccattgact gtatgtgctg cttttgttac caaagagcat gtccttattt taaaaacttt
    17101 gggtgtagat gattcaaaaa aattaaccga tactaaaatc gtagaacttg ctgagcaatt
    17161 ggttactttc attccacatt cactattaac actacacaat gaaaaatata atattcagca
    17221 agcaaaaggc tggactcaag taaaaatgaa agctgttctt cataatgaag ccatcaaaaa
    17281 tgtacttgaa aaaattgatt cgtctcaatt ggattatatt gtgattgatc agttcgcaaa
    17341 acgcgaagtg tatagccatt acgcattatc agatatacca cttccaaaga aaacaaaatt
    17401 tgaaacaaaa ggagaatcaa agtcattagc cattgcagtg gcaagcataa tttctcgata
    17461 cgcatttgtt acatatatgg atcaaatatc aaaaaatatt aatatgacga ttcctaaagg
    17521 tgccggtgct aaagtcgatg taatcgccgc caaaattata aaaaaatacg gtctttcacg
    17581 tttagatacc atttcaaaaa agcattttaa aaatcgtgaa aaagcccaaa aaattttaaa
    17641 gcctctttga tttataatca ttagaggctt ttatgcagtt gtgcaaagca ccaactgtaa
    17701 tccgctgtgc ctctttgatt tttaatcaag ataaattgga tcctaatagg aaatcctatt
    17761 aggtaagtca tactaatttg ctttgctcat aagtatgact ttatatgcag tgatgcgaag
    17821 catcaactgt aatccgctgt tcctctttga ctttttaaat gcattggaac ctaattggtg
    17881 aacccaaaaa taaaacccca tgttagggat atcaatctac ttcagatatc cttatacatg
    17941 gggtttaaat cattatctaa taacagcacc ttgttcaatt aatgctgctt caatttccgc
    18001 ttgtactttt gaaacgcgct catctgtcaa tgtttcttct gtgtctaaat aatttaaacg
    18061 tattgcaatt gattttttac ctttttctaa atgttcgccc tgatatacat caaagacaag
    18121 tgtatctttt aatatattgc caccgtgtgc atgaatcgtt gataataaat cagctgctgg
    18181 aatattttga tctacttcta atgcaatgtc acgagacatg cctgggaatc tcggaattgg
    18241 ctggtaatta atgtaaccta ccgacacagc cattaatgca tcaaaattca actcaaaaac
    18301 atacgtacgt tttaaatcat tatcagctgc taatgttgga tgtaattcac caataaaacc
    18361 aacaacttta ttctctaata agatttcagc agtacgacct ggatgtaatc catcaatatc
    18421 agcacgacga taactaaatt caaggtttaa cttttcagat actcgatcca cgacaccttt
    18481 tgctaaatag aaatcaaccg tttctttctt accttgccat tgattgacta cataatctcc
    18541 agttaaaata ccacttaaat attcaacttg atctggtagt tcaccttctc cattagcaaa
    18601 gaagacattg ccgatttcaa ataattttac atctttattt ttgcgtgcca cattatatga
    18661 tgccgcttcg attaaatgtg gtaataaact ttgacgtaat gacgcatgcg cttcactcat
    18721 tggcatcaat aaatcaattg tttgacgctg ttgcatcgca aatgcagtag catcttcttt
    18781 agaaactaac gaatacgtaa tagcttggtc taatccagca ccttctaaca cttctttaac
    18841 cattctcgtt ttatattggc gatcagttag ctgaccacta gtaacttttt cgaagacagg
    18901 taacgttgat ggaatatcgt cgtacccata aatacgtgca acttcttcaa ttaaatcttc
    18961 tttaattgta atatctttac gacgtgatgg tacttgcact gtaataacat catcatttat
    19021 ttctgtatca aaccctagtt gattaaaaat agtaacaata tcattttgtg acaaatcaaa
    19081 tccaatagtg cgattaattt tatcagcagt gatgtcgatt ggtgtaataa atgcaccaag
    19141 ttctcctgaa gacactctat cttttagcac ttttccgttt gcataagttt gtaataaata
    19201 acatgcacgg tcgactgctt catctacaaa ttcagtagct attccttttt caaaacgact
    19261 agatgattca ctgcgtaaat ttaaacgtct tgatgtatga cgaattgaaa ctggatcaaa
    19321 aatagcacct tcaatcacta tatttgatgt atgttcttta acttctgaaa aatcgccacc
    19381 cataacacca gctaatgcaa ttggagtttg tccattagta atgacaatat cgctcgttaa
    19441 taattcacgt tctgtatcat ctaatgttgt cattttttcg ccttcattcg cttgacgaac
    19501 aacaatttgt tgtgaaccaa tcgcatcttg atcaaacatg tgcaatggtt gaccgtattc
    19561 taataacaca taatttgaaa tgtcaacaac attattaata ggacgtatac ccgcttttat
    19621 taagcgtgct tgcatccaaa ttggcgaagg ttcaattgtc acgtcgtgaa caacacgtgc
    19681 actataatat ggtactttat cttcattttc aattgtcaca gtcagttcat catttgcaga
    19741 taactcaagc tcatttgatg ttgtgtctgg cttagtcatt tttgtattat ataatgctgc
    19801 aacttcataa gcagtaccta tcatacttaa agcatcagca cgattcggcg ttaaatcaaa
    19861 ttccattact tgatcatcta aatataaagc ttgtaaggca tctgttcctg gaacttggga
    19921 ttcactaaaa acataaatgc ctgattcaaa acttttcggt acatagttac ttgaaatacc
    19981 aatttcttgt aacgaacaaa tcataccttc tgaacgttca ccgcgtaatt tggcacgctt
    20041 aattttaata ccaccaggca atcttccacc tactttagca acaatgacat attgtcctgc
    20101 atcaacgttc ggtgcaccac atacgatttg tacaggttcg tcttctccga tatcaacttg
    20161 gcaaacattt aatttatcag catcaggatg tttctctttt gacttaacga agccgacaac
    20221 taaatttttg atatcttttg tgtagtcaat taaatcatcc acttcaatac ctgtgcgcgt
    20281 aatacgttct gccaaattac ttacagaatc atcgattgtt acatattctt tcaaccattc
    20341 atttgatatc aacattacat gtcacctcta tcttctaccg ctttaaattg atctaaaaat
    20401 ctcacatcat tagtatagaa atgacgaata tcttctatac catattttaa cattgcaata
    20461 cggtctggtc ccataccaaa tgcaaatcca gagtactctg aagaatcaaa accagccatt
    20521 tctaatacat taggatgtac cattccagca cctaaaatct caatccatcc tgtgtgttta
    20581 cacacattac aaccttttcc tttacattta aaacatgaca catcaacttc tacagaaggt
    20641 tcagtgaatg ggaagtaact tggacgtaaa cgaatttcac gatcagcacc aaataatttc
    20701 ttagctaaca attctaaagt acctttcaaa tcactcattt taacgttttt atcaacaact
    20761 aatccttcaa tttgtgtaaa ttgatgacta tgtgtcgcat catcagagtc acgacgatac
    20821 actttaccag ggcaaataat tttaactgga ccttgaccat gacgtgattc catcgtacgt
    20881 gcctgcactg gtgatgtatg cgtacgtaat aaaatttcat ccgtaatata gaaactatct
    20941 tgcatatcac gtgcagggtg tgatttaggt aaattcagca tttcgaagtt ataatgatct
    21001 tgttcaactt catatccatt cacaatttca taacctaaac ctaagaataa gtcttcaatt
    21061 tcttctattg tacgtgttaa tggatgcttt gaaccgattt caatatgacg acctggtaat
    21121 gatacatcaa ttgtttcttc agccaattgc ttatttaatt tttctttaac taacatctgt
    21181 tgtctttcat ctaattcatt ttgaattgtt tgacgcaatt cattcacttt ttgaccaaat
    21241 gcaggtttct cttcattcgg caaatccttc atcaatttca ttagtccgct aactgaccct
    21301 tttttaccta agtatttcac tttaacttct tgcagtgcac gttcatcatt tgcttcatta
    21361 atatctacaa gcgcttgttg ttttaactct gacattgttt gttgttcaga catatgtcac
    21421 tgacctccct attcgaacta ttcattttct atttatcata tttgttgttt aactaaaaaa
    21481 agactttcat cctcttaaaa aataagggac gaaagtcatt tccgtggtac cacccaaatt
    21541 tatgcctaag catacacttg tttaatattg ataacggatt gtctttccga cttaaatctc
    21601 tttaagtaac caaaaaggtg aaaagacttt aaataattgg aataacttgc agtcacgatt
    21661 attctcccta aaacaattat ttatataaat gtccatgcct ttttattggt ttatattcaa
    21721 ttgtgtatgc aatcacgtag aaatgttctg ttaaacaatt aattataatt atatcggaaa
    21781 actttcaaca cggtcaacct ttcaaatgat aaagtaaaat actacctgca atcgctacat
    21841 ttaaactttc agctttacca taaataggta tgattaaatt ttgtgtagta tgtgctaata
    21901 attcaggatt aacaccttct ccctcattac ctaatagtaa tgcaaaagaa tcacttgaag
    21961 taacttcttt gtatgccact gcgttttcaa gtgctgtacc ataaacagga ccattaaatt
    22021 gagtaataaa cgtatcgaga tcttgagtca taactggcaa atgaaaaaca ctaccttgac
    22081 tcgctcgcaa tactttatct tgataaggat ctgtcgtacc cttctccatt attacagcat
    22141 ccattccagc agcatccgca gttctaatta atgtgcctaa atttccagga tcttgaacac
    22201 gatcgataag caatacttgt tgtgctttag aaatatcata ttgtggcttc tcaatgattg
    22261 cgaaaaaccc ttgtggtgtc actgtacctg ataaagattc agcaactttc atgtttattt
    22321 caaaaatttc ttgcgcgtat gcgataattt gctgatctaa tcttgccggt tcaattgcaa
    22381 ataattgtgt aattacaatc ccactttgat aagcttcttc aattaaatgc acaccttcaa
    22441 ttaaagctaa tccagtttta tccctctcac gtttcttttt tagcttgttc gcttgtttaa
    22501 ttctattatt ttgtgcaga
//
LOCUS       DAKPJH010000035        22395 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.035, whole genome shotgun sequence.
ACCESSION   DAKPJH010000035 DAKPJH010000000
VERSION     DAKPJH010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22395
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.035"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            10..807
                     /locus_tag="OY092_001145"
     CDS             10..807
                     /locus_tag="OY092_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HCX1076097.1"
                     /translation="MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHG
                     KGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRF
                     IQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAM
                     GWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFI
                     TSLPQRHVVPNEGRSVLSGVVIDLDKEGKTKHIERILINDDHPFSTF"
     gene            947..2707
                     /locus_tag="OY092_001146"
     CDS             947..2707
                     /locus_tag="OY092_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HCX1076098.1"
                     /translation="MKPQLSWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSR
                     IKGGHTNNKIRVSTTPVHAISDDLDILIAFDQETIDVNHHEMREDSIILADAKAKPVK
                     PEGCHAQLIELPFTATAKELGTALMKNMVAIGATSALMNLNTNTFEELITNMFSKKGD
                     KVVEVNIQALNEGYQLMQSRLPEIYGDFELESTDALPHLYMIGNDAIGLGAIAAGSQF
                     MAAYPITPASEVMEYMIANISKVNGAVIQTEDEIAAVTMAIGANYGGVRAFTASAGPG
                     LSLMMEAIGLSGMTETPLVIINTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVA
                     PTDAEDAFYLTMEAFNLAEQYQCPVIVLSDLQLSLGKQTVEKLDYNRIEIKRGEIIQS
                     DIEREEDDKGYFKRYALTSNGVSPRPIPGIKGGIHHITGVEHNEEGKPSESASNRQQQ
                     MEKRMRKIEQLLIELPVEANLQHEDADILYIGFISTKGAIQEGSNRLNQQGIKVNTIQ
                     IRQLHPFPTSVIQDAVNKAKKVVVVEHNYQGQLSSIIKMNVNIHDKIENYTKYDGTPF
                     LPHEIEEKGKIIATEIKEMV"
     gene            2708..3574
                     /locus_tag="OY092_001147"
     CDS             2708..3574
                     /locus_tag="OY092_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HCX1076099.1"
                     /translation="MATFKDFRNNVKPNWCPGCGDFSVQAAIQKAAANIGLEPEEVAI
                     ITGIGCSGRLSGYINSYGVHSIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGH
                     TIHALRRNMNMTYIVMDNQIYGLTKGQTSPSSAVGFVTKTTPKGNIEKNVAPLELALS
                     SGATFVAQGFSSDIKGLTKLIEDAINHDGFSFVNVFSPCVTYNKINTYDWFKEHLTSV
                     DDIENYDSTDKQLATKTVIEHESLVTGIVYQDKETPSYESQIKELDDTPLAKRDIKIT
                     EDTFNALTEQFI"
     gene            3668..3961
                     /locus_tag="OY092_001148"
     CDS             3668..3961
                     /locus_tag="OY092_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-binding protein"
                     /protein_id="HCX1076100.1"
                     /translation="MKDTLMSIQIIPKTPNNDNVIPYVDEAIKIIDESGLHFRVGPLE
                     TTVQGNMNECLILIQSLNERMVELECPSIISQVKFYHVPDGITIETLTEKYDE"
     gene            4095..5639
                     /gene="miaB"
                     /locus_tag="OY092_001149"
     CDS             4095..5639
                     /gene="miaB"
                     /locus_tag="OY092_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HCX1076101.1"
                     /translation="MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKR
                     GKQEVRYNRDFQIDEKYRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDI
                     NTADVILINTCAIRENAENKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILK
                     SYQNVDMIFGTHNIHHLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVN
                     IMYGCDKFCTYCIVPFTRGKERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL
                     QDIEYDLGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGN
                     NAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEV
                     GFEHAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT
                     VLCEGSSKKDDQVLAGYTDKNKLVNFKAPKEMIGKLVEVRIDEAKQYSLNGSFVKEVE
                     PEMVIQ"
     gene            5640..6005
                     /locus_tag="OY092_001150"
     CDS             5640..6005
                     /locus_tag="OY092_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HCX1076102.1"
                     /translation="MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKM
                     DMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKM
                     FVSTMETRLNDHNKAKHSD"
     gene            6032..6523
                     /gene="thiW"
                     /locus_tag="OY092_001151"
     CDS             6032..6523
                     /gene="thiW"
                     /locus_tag="OY092_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy coupling factor transporter S component
                     ThiW"
                     /protein_id="HCX1076103.1"
                     /translation="MKSRKLAITALLIAINVVLSSIIIIPLGPVKAAPVQHFVNVLSA
                     VIVGPWYGLAQALISSILRVLFGTGTAFAFPGSMIGVLLASMFYIYRKHIFMAAVGEV
                     LGTGVIGSLICIPLAYFLGLQDFFIKPLMITFIVSSAIGSIISYFLLITLKKRGILQR
                     FIK"
     gene            6826..9444
                     /gene="mutS"
                     /locus_tag="OY092_001152"
     CDS             6826..9444
                     /gene="mutS"
                     /locus_tag="OY092_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HCX1076104.1"
                     /translation="MSNVTPMMQQYLKIKSEYQDCLLFFRLGDFYEMFYEDAKEASRV
                     LEITLTKRDAKKENPIPMCGVPYHSADSYIDTLVNNGYKVAICEQMEDPKQTKGMVRR
                     EVVRIVTPGTVMEQGGVDDKQNNYILSFVMNQPEIALSYCDVSTGELKVTHFNDEATL
                     LNEITTINPNEVVINDNISDNLKRQINMVTETITVRETLSSEIYSVNQTEHKLMYQAT
                     QLLLDYIHHTQKRDLSHIEDVVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWL
                     MDETKTPMGARRLKQWIDRPLISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIE
                     RLVGRVSYGNVNARDLIQLKHSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILE
                     QSLVEEPPISVKDGGLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKIS
                     FNKVFGYFIEITRANLQNFEPSEFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAI
                     ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYNYTRPSFSENKTLE
                     LVESRHPVVERVMDYNDYVPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQM
                     GAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDE
                     IGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEY
                     KGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLK
                     MVENEPEINQENLNLSVEETTDTLSQKDFEQASFDLFENDQESEIELQIKNLNLSNMT
                     PIEALVKLSELQNQLK"
     gene            9457..11466
                     /gene="mutL"
                     /locus_tag="OY092_001153"
     CDS             9457..11466
                     /gene="mutL"
                     /locus_tag="OY092_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HCX1076105.1"
                     /translation="MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEIS
                     IEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALAS
                     ISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYI
                     KSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVAR
                     DLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLT
                     IGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKN
                     NLDYVPKKNKVLHSFEQQKIEFEQRQNTENNQEKTFSSEESNSKPFMEENQNDEIVIK
                     EDSYNPFVTKTSESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDDTTVQ
                     NYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAA
                     QERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGG
                     HDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHY
                     LQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM"
     gene            11472..12014
                     /locus_tag="OY092_001154"
     CDS             11472..12014
                     /locus_tag="OY092_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HCX1076106.1"
                     /translation="MNQVNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIME
                     LLKQNHIECFIHIDLIKGLSHDEFASEFIIQQYKPKGIVSTKSKVIKKAKSLNTLTIF
                     RVFIIDSQALKRSIDLIKKVEPDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDE
                     VNEAVKNGAKYVTTSYDKLW"
     gene            12479..13297
                     /locus_tag="OY092_001155"
     CDS             12479..13297
                     /locus_tag="OY092_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HCX1076107.1"
                     /translation="MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGW
                     GLAVTMGVFAVGQFSGAHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWL
                     MYLPHWKATEEAGAKLGVFSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGL
                     NPLIVGALIVAIGLSLGGATGYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILG
                     PIAGGLLGAVVYAVFYKHTFNIGCAIAIVVVIITLILGYILNKSSKKGDIESIY"
     gene            13426..14922
                     /gene="glpK"
                     /locus_tag="OY092_001156"
     CDS             13426..14922
                     /gene="glpK"
                     /locus_tag="OY092_001156"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HCX1076108.1"
                     /translation="MEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWV
                     EHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQRETTVVWDKHTGRPIYHAIVW
                     QSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLL
                     FGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKA
                     SSEVYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGD
                     KAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATR
                     VDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVME
                     AMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAV
                     GFWESKDDIAKNWKLEEKFDPKMDEGEREKLYRGWKKAVEATQVFKTE"
     gene            15080..16753
                     /locus_tag="OY092_001157"
     CDS             15080..16753
                     /locus_tag="OY092_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HCX1076109.1"
                     /translation="MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMK
                     VALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEW
                     MLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGG
                     GYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNEN
                     YTIKAKKVVNAAGPWVDDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEK
                     DGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDI
                     ESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSK
                     RLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASK
                     YGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIK
                     DVLDYKDSIIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE"
     gene            16903..17817
                     /locus_tag="OY092_001158"
     CDS             16903..17817
                     /locus_tag="OY092_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076110.1"
                     /translation="MTEKQFKLTVQDNTNIEVKVNFTDVDSKGIIHIFHGMAEHMERY
                     DKLAHALSKDGFDVICHNHRGHGINIDESTRGHYDDMKRVIGDAFEVAQTVRGNVDKP
                     YIIIGHSMGSVIARLFVETYPQYVDGLILSGTGMYPLWKGLPTVKVLQLITKIYGAEK
                     RVEWVNQLVSNSFNKKIRPLRTQSDWISSNPTEVDNFIKDPYSGFNVSNQLLYQTAYY
                     MLHTSQLKNIKMLNHAMPILLVSGCDDPLGDYGKGILKLANIYRKAGIKNVKVNLYHH
                     KRHEVLFEKDHDKIWEDLFKWLNQFYKK"
     gene            17835..18770
                     /gene="miaA"
                     /locus_tag="OY092_001159"
     CDS             17835..18770
                     /gene="miaA"
                     /locus_tag="OY092_001159"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HCX1076111.1"
                     /translation="MNKNKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYK
                     HMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAG
                     GTGLYIQSLIYNYELEDETVTPAQLSIVKQKLSALEHLDNQQLHDYLDQFDAVSAENI
                     HPNNRQRVLRAIEYYLKTKKLLSNRKKVQQFTENYDTLLLGIEMSRKTLYSRINKRVD
                     IMLDHGLFREVQQLVEQGYESCQSMQAIGYKELIPVINGQMIYEDAVNDLKQHSRQYA
                     KRQMTWFKNKMSVHWLDKENMSLQMMLDEITTQIK"
     gene            18785..19018
                     /gene="hfq"
                     /locus_tag="OY092_001160"
     CDS             18785..19018
                     /gene="hfq"
                     /locus_tag="OY092_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HCX1076112.1"
                     /translation="MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVV
                     SLNSQGKQHLIYKHAISTYTVETEGQASTESEE"
     gene            complement(19240..19716)
                     /locus_tag="OY092_001161"
     CDS             complement(19240..19716)
                     /locus_tag="OY092_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HCX1076113.1"
                     /translation="METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEG
                     LQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEH
                     QLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL"
     gene            19828..21066
                     /gene="hflX"
                     /locus_tag="OY092_001162"
     CDS             19828..21066
                     /gene="hflX"
                     /locus_tag="OY092_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HCX1076114.1"
                     /translation="MAQQQIHDIKIKLEKAVLVGVHAQDDKQFNFESTMEELSSLSET
                     CQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEFKDIDVVITNDELTTAQSKSLNE
                     ALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGT
                     RGPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFQVALVGYTNAGK
                     SSWFNVLANEETYEKDQLFATLDPKTRQIQINDGFNLIISDTVGFIQKLPTTLIAAFK
                     STLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMSHISQIVIFNKKDLCDHAS
                     NRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRRLTYYDEAIATNNADRLYFLKQHTL
                     VTELKYDEIENVYRIKGFKK"
     gene            21085..22323
                     /locus_tag="OY092_001163"
     CDS             21085..22323
                     /locus_tag="OY092_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCX1076115.1"
                     /translation="MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATE
                     SDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDE
                     LIYITGSPYDTLLEVIGVNGNGIESLMEYGVSYKDIALKEGKIDIESVLDGVSERTKV
                     IAIQRSKGYDQRPSIPLDEIEQVIIRLKEVHPNILIFVDNCYGEFVERREPIECGADL
                     IAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFF
                     LAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKFKTKEQMISFCQSIQ
                     HASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTY
                     EHVKIAVTRAVNQLKEQGLI"
BASE COUNT         8294 a         3047 c         4281 g         6773 t
ORIGIN      
        1 gaacaaaaca tgagaataat gtttataggg gatatcgtag gtaaaattgg acgagacgca
       61 attgaaacgt acatacctca actgaagcaa aagtataaac caacagttac aattgtaaat
      121 gctgaaaatg cagcacatgg taaaggtttg actgaaaaaa tatataaaca attactaaga
      181 aatggtgtag atttcatgac tatgggtaat cacacatatg gtcaacgtga aatttatgat
      241 tttatagatg aagcaaaacg actagtaaga ccagcgaatt ttccggatga agcgccggga
      301 attggtatga gatttataca aattaatgat attaaacttg cagttattaa tctgcaagga
      361 agagcgttta tgccagatat tgatgatcct tttaaaaagg cagatcaatt agtcaaggaa
      421 gcacaagaac aaactccgtt tatatttgtt gattttcatg cagaaacaac ttctgaaaag
      481 tatgcaatgg gatggcattt agatggtaga gctagcgctg ttgttggaac gcatacacac
      541 attcaaacag cagatgaacg tattttacca aaggggacag ggtatataac ggatgttggt
      601 atgacaggtt tttatgacgg cattttagga ataaataaaa cagaggtaat tgagcgtttt
      661 atcactagtt tgccacaaag acatgttgtt ccaaatgaag gtagaagtgt attatctggt
      721 gttgttattg atttagacaa agaaggtaaa acgaagcaca tcgaacgtat attgataaat
      781 gatgaccatc cattttcaac attttaaaat tacgtaagta aacattcgaa ttggacccta
      841 tcgtccatta gtatgaattt aatatagtac cactgtttac atagtaaatc ggtggttctt
      901 tttgttatca tttaatatga aatatatcca taggaggcat ataactatga aaccacaatt
      961 atcgtggaaa gttggcggtc aacaaggcga aggtattgaa tcaactgggg aaatcttcgc
     1021 tacggctatg aatagaaaag gatattattt atatggatat agacattttt caagtcgtat
     1081 caaaggtgga catacgaata ataaaattag agtttctacg acgcctgttc atgcaattag
     1141 tgatgattta gatattttga ttgcatttga ccaagaaaca attgatgtta accatcatga
     1201 aatgagagaa gacagtatta ttttagctga tgccaaggct aaacctgtga aaccagaagg
     1261 atgtcatgca cagcttattg aattaccttt tacagcaacc gctaaagaat taggtacagc
     1321 attaatgaaa aacatggttg caataggtgc tactagcgca ttgatgaatt tgaatacaaa
     1381 tacatttgaa gaacttatta ctaatatgtt ttctaaaaaa ggtgacaagg tagttgaagt
     1441 caatatccaa gcattaaacg aaggttatca attaatgcaa tctcgcttac ctgaaatcta
     1501 cggggacttt gaattagagt caacagatgc actaccacat ctatatatga ttggtaacga
     1561 tgccattgga ttaggtgcaa ttgctgcagg ttcgcaattt atggcggcat atcctattac
     1621 acctgcgtct gaagttatgg aatatatgat tgccaatata tctaaagtaa acggagcggt
     1681 tattcaaaca gaagatgaaa ttgctgctgt aactatggct attggtgcaa attatggtgg
     1741 agtcagagcg tttacggcta gtgctggtcc aggtttatct ttaatgatgg aagcaattgg
     1801 attatctggt atgactgaaa cgccattagt cattattaat acccaacgag gtggaccttc
     1861 tactggatta cctacgaaac aagaacagtc agatttaatg caaatgattt atggtacaca
     1921 tggtgatatt ccaaaaattg ttgtagcacc aactgatgca gaagatgcat tttatttaac
     1981 tatggaagcc tttaatttag cagaacaata tcaatgccct gttatagttc taagtgattt
     2041 gcaattatct ttaggtaaac aaactgttga aaaattagat tataatcgca ttgaaattaa
     2101 acgtggtgaa atcattcaat ctgatattga acgtgaagaa gatgataaag gttatttcaa
     2161 gcgttatgcg ttaacatcca atggtgtttc tcctagacct atccccggta ttaaaggagg
     2221 tattcatcat ataactggtg tggaacacaa tgaagaaggt aaacctagtg aatctgcatc
     2281 aaatagacaa caacaaatgg aaaaacgaat gcgtaaaatt gagcagttac taattgaatt
     2341 gccagtagaa gctaacttac aacatgaaga tgcagatatt ctttatatcg gttttatttc
     2401 tacaaaaggt gcaattcaag aaggtagtaa ccgtttgaat caacaaggca taaaagttaa
     2461 cactatacaa attagacaat tgcatccatt cccaacaagc gttattcaag atgcagttaa
     2521 taaagcgaag aaagtcgttg tagtggagca caattatcaa ggacaattgt ctagtattat
     2581 aaaaatgaat gtcaatattc atgataagat tgaaaattat acaaagtatg atgggacacc
     2641 tttcctacca catgaaatcg aagaaaaagg caaaataatt gctactgaaa taaaggagat
     2701 ggtatagatg gcgacattta aagattttag aaataatgtt aagcctaact ggtgccctgg
     2761 atgtggcgat ttctcagtac aagctgcaat tcaaaaagca gccgcaaata tagggttaga
     2821 acctgaagaa gtagctatca tcaccggtat aggatgttct ggccgtcttt caggatatat
     2881 taattcttat ggcgttcatt ctattcacgg acgtgcatta cctttagctc aaggtgtaaa
     2941 aatggcgaat aaagatttaa ctgttattgc atctggagga gatggtgatg gttatgctat
     3001 aggtatgggg catacaatcc atgctttaag aagaaatatg aacatgacgt atatagtcat
     3061 ggataatcaa atttatggtt tgacaaaggg acaaacatcg ccgtcatcag cagtaggatt
     3121 tgttactaaa acaacgccaa aaggtaatat agaaaaaaat gttgcgcctt tagaattagc
     3181 attatcatct ggtgccacat ttgtagccca aggtttttca agcgatatta aaggattaac
     3241 aaaactaatt gaagatgcaa ttaatcatga tggattttca ttcgttaatg tcttttcacc
     3301 ttgtgtgact tataataaaa ttaacacata cgattggttt aaagaacatt taacaagtgt
     3361 tgatgacatt gaaaattatg attctacaga taaacaatta gcgactaaaa ctgttattga
     3421 acatgaatct ttagtaactg gtattgttta tcaagataaa gaaacaccat catatgaatc
     3481 tcaaattaaa gagttagatg atacaccact tgctaaaaga gatatcaaaa ttactgaaga
     3541 caccttcaat gcattaactg aacaatttat ttaataatta aaactgagtc gtataaatgt
     3601 atttataaca gatccattta tgctactcag ttttttacta ttacaaaaaa taaaggagtt
     3661 tttaaaaatg aaagacacat taatgagtat acaaataatt cctaaaacac caaacaatga
     3721 caatgttatt ccttacgtag acgaggcgat taaaataatt gacgaatctg gtttgcattt
     3781 tagagtaggt ccgttagaaa cgacagtaca aggaaatatg aatgaatgtt taattttaat
     3841 acaatcatta aatgaacgaa tggtggaact tgaatgtcca agtattatta gccaagttaa
     3901 gttttatcat gtgccagatg gcatcactat tgaaacttta actgaaaaat atgatgaata
     3961 acattaaaag tgaagtaaac tggatttgaa ttggcttgtt agagatgacg tataacttta
     4021 actgtttttg cactttatag ttaaatttaa tataattatt aaatgatacg ggcaaataga
     4081 aaggattttg taaagtgaac gaagaacaaa gaaaagcaag ttctgtagat gttttagctg
     4141 agagagataa gaaagctgaa aaagattata gtaaatattt tgaacatgtt tatcagccgc
     4201 ctaatttaaa agaagcgaaa aaaagaggta aacaagaagt tcgttataat agagatttcc
     4261 aaattgatga aaaatatcgc ggtatgggga acgagcgtac atttttaatt aaaacatatg
     4321 gatgtcaaat gaatgcacat gacactgagg tcattgctgg tatacttgaa gcattaggct
     4381 atcaagcaac gactgatatt aacactgcag atgttatttt aattaataca tgtgcgatta
     4441 gagaaaatgc cgagaacaaa gtgtttagtg aaataggtaa tttgaagcat ttgaaaaaag
     4501 aacgacctga tattttaatc ggtgtttgtg gttgtatgtc acaagaagag tcagtagtga
     4561 ataaaatttt aaaatcgtat caaaatgtag atatgatatt tggtacacat aatattcatc
     4621 atttaccaga aattttagaa gaagcatact tatctaaagc aatggttgtt gaagtatggt
     4681 ctaaagaagg agacgttatt gaaaatcttc caaaagtccg tgaaggcaac attaaagcat
     4741 gggtcaatat tatgtatggt tgtgataagt tttgtacata ttgtattgtt ccatttacaa
     4801 gaggtaaaga acgaagccgc agacctgaag acattataga tgaagtacgt gaacttgctc
     4861 gtgaaggtta caaagaaata acgcttttag gtcaaaatgt aaattcttat ggtaaagatt
     4921 tacaggatat agaatatgac ttaggagatc ttttacaagc aatttctaaa atagcgattc
     4981 caagagttcg tttcacaaca agtcatcctt gggactttac agatcacatg attgatgtta
     5041 tttcagaggg tggtaatatc gttccgcata tccacttgcc agttcaatct ggaaataatg
     5101 cagtattaaa aataatgggt agaaaatata cacgagaaag ttatttggat ttagtaaaac
     5161 gaatcaaaga tagaattcct aatgtagcat taactacaga tattattgta gggtatccaa
     5221 atgaatcaga ggaacaattt gaagaaactt taactctgta tgatgaagtt ggttttgaac
     5281 atgcatatac gtatttgtat tcacaacgtg atggtacgcc tgctgctaaa atgaaagata
     5341 atgtaccttt agatgtcaaa aaggaacgat tgcaacgttt gaataaaaaa gttggtcatt
     5401 attcacaaat agctatgagt aagtacgaag gacaaactgt aacagtactt tgtgaaggta
     5461 gtagtaaaaa agatgatcag gttcttgctg gctacactga taaaaataag ctagttaatt
     5521 tcaaagcgcc taaagaaatg attggtaaac tagtggaagt acgaatagat gaagctaaac
     5581 agtattcatt aaatggcagt tttgtaaagg aagtagagcc ggaaatggtg attcaataaa
     5641 tgtataataa agatgacgtg ttgaaacaag cggataatat tgcaaataaa attaaaaatt
     5701 tggatactat caaaacatat caacaaattg aagcacagat tcatcagaac caaacgataa
     5761 agactaaaat ggatatgtta aaaaagcatc aaaaacaagc agtaaacttt caaaattacg
     5821 ggaaacaaaa tgcgctagaa cagtcggaac ataccattca aagtatagaa gcagaaataa
     5881 atacattgcc catagttgaa cagtttcaaa cttcacaata tgaagcgaat caattattga
     5941 aaatgtttgt atcaacaatg gaaacacgtt taaatgacca taataaagcc aagcatagtg
     6001 attaattaca aacaaaaagg agaacaatca tatgaaatca agaaaactgg ctataactgc
     6061 acttttaatt gcaataaatg ttgtattaag cagtattatc atcattcctc taggaccagt
     6121 taaggcagca ccagtacagc attttgtaaa tgtattaagt gcggtcatag taggtccttg
     6181 gtatggatta gctcaagcgc ttatatcatc aattttaaga gttctttttg gtactggtac
     6241 agcttttgca tttccaggta gtatgattgg agttttattg gctagtatgt tttacatata
     6301 tcgtaaacat atattcatgg ccgcggtcgg tgaagtactt ggaactggtg tcatcggaag
     6361 tttaatttgt ataccattag catatttcct tgggcttcaa gacttcttca ttaaaccgtt
     6421 aatgattacg ttcatagtct caagtgctat cggatctatt ataagttatt tcttattaat
     6481 tactctaaaa aaacgtggta ttcttcaaag gtttataaaa taattttatg atatatgatt
     6541 tcaaacagag tcattgttca ttttaatatt gaacgccctt acttaattaa atgtcttgaa
     6601 tgttagaatt ttaatttaat tctaaacatg ctattgacac attttattag gtttgaggcg
     6661 ttttcttata catttaagat gcttcgtgat tatatggtat gaataggttt gtaaaagtaa
     6721 gtatgttaaa atgtataagt taaataatta ataattagaa agcttacaaa cgaatatatt
     6781 gtaaagacaa attttaaaaa gagacaaggg ttgtgaagaa ataatatgtc taatgttaca
     6841 ccaatgatgc agcaatattt aaaaataaaa tcagaatacc aagattgctt attatttttt
     6901 agactaggtg atttctatga aatgttttat gaagatgcca aggaggcatc acgtgtactt
     6961 gaaattactt taactaaaag agatgctaaa aaagaaaatc caattccgat gtgtggtgtt
     7021 ccgtatcatt ctgcagatag ttatatagat acacttgtta ataatggata taaagtagct
     7081 atttgtgaac agatggaaga tccgaaacaa acgaaaggta tggttagacg tgaggtagta
     7141 agaattgtga ctccaggaac tgtgatggag caaggtggtg tagatgataa acaaaataac
     7201 tatattttaa gttttgttat gaatcaacct gaaattgcgc ttagttactg tgatgtttct
     7261 actggcgaat taaaggttac acattttaat gatgaagcga ctttattaaa tgaaattacg
     7321 acgataaacc ctaacgaagt tgttatcaat gacaatattt ccgataattt aaaaagacaa
     7381 attaatatgg tgacagaaac aataacagtc agggaaacgt tatcatcaga aatctatagt
     7441 gtgaatcaaa ctgaacataa attaatgtat caagcgacac aattattgct agattatatt
     7501 catcatacac aaaaacgtga tttatcgcat atcgaggatg ttgttcaata tgcagctata
     7561 gattatatga aaatggattt ttatgctaag agaaaccttg agttaacgga aagcattcga
     7621 ttaaaatcaa aaaaaggaac gctactttgg ctaatggacg aaacgaaaac accaatggga
     7681 gcacgccgct taaaacaatg gatagataga ccactaataa gtaaagaaca aattgaagca
     7741 cgattagata tcgttgatga atttagtgct catttcatag aaagagacac cttaagaaca
     7801 tatcttaatc aagtgtatga tattgaacgt cttgttgggc gtgttagtta tggaaatgtt
     7861 aatgcgagag atttaattca acttaaacat tccatttctg aaataccgaa tattaaagca
     7921 ttactaaatt ctatgaatca gaatactctt gtacaagtta atcaactaga accccttgat
     7981 gatttacttg atatattaga acagagttta gtagaagaac caccaatttc agttaaagat
     8041 ggcggactat tcaaagttgg ttttaatacg caattagatg aatatcttga agcttcaaaa
     8101 aacggaaaaa catggttagc agaattacaa gccaaagaaa gacaacgtac aggaataaaa
     8161 tcattgaaaa taagctttaa taaagtgttt ggttatttta tagaaataac acgtgccaac
     8221 ttgcaaaatt ttgaaccaag tgaatttggt tatatgagga agcaaacgtt atcgaatgcg
     8281 gaacgtttta taactgatga acttaaagaa aaagaagata tcattttagg tgcggaagac
     8341 aaagccatcg aattagaata tcaattattt gttcagctac gtgaagaagt taaaaaatat
     8401 actgaacgtt tacaacaaca agctaaaatt atttcagagc tagattgttt acagagcttt
     8461 gcagaaattg ctcaaaaata taattacact aggccttcat ttagtgaaaa taaaacatta
     8521 gaattagtgg aatctaggca cccagtagtg gaaagagtaa tggattataa tgactatgtg
     8581 cctaataatt gtcgattaga taatgaaaca tttatatatt taattacagg tccgaatatg
     8641 tctggtaaat cgacatatat gagacaagtt gccataatta gtataatggc ccaaatggga
     8701 gcttatgtcc cttgtaaaga ggcagtgtta cctatatttg atcaaatatt cactagaata
     8761 ggtgcggcag atgatttggt ttcaggtaag agtacgttta tggtagaaat gctagaagca
     8821 caaaaggcat taacttatgc aacagaggat agtttgatta ttttcgatga aattggacgt
     8881 ggtacttcaa cgtatgacgg tttagcttta gcgcaggcaa tgatagagta tgtagctgaa
     8941 acatcacatg ctaaaacgtt attttcaaca cattatcatg aattgacaac attagatcaa
     9001 gcattaccaa gtctaaaaaa tgttcacgtc gctgctaatg aatataaagg tgaacttata
     9061 ttcttgcata aagtcaaaga tggtgcagtt gacgatagtt atggtattca agttgcgaaa
     9121 ttagctgatt tacctgaaaa agttattagc agagcacaag tgatcctaag cgagtttgaa
     9181 gcgtctgctg gtaaaaaatc atcgatatca aatttaaaaa tggtcgaaaa tgaacctgaa
     9241 attaatcaag aaaatttaaa cttaagtgtt gaagaaacaa ctgatacttt atctcaaaaa
     9301 gactttgaac aagcatcatt tgatttgttt gaaaatgatc aagaaagcga gattgaacta
     9361 caaattaaaa atttgaattt atctaatatg acaccaattg aggcattggt gaagttaagt
     9421 gaattacaaa atcaattaaa atagaggtgt tgcaaaatgg ggaaaattaa agaactccaa
     9481 acctcattag caaataaaat cgcagcaggt gaagtagttg aaagaccgag ttctgttgtg
     9541 aaagaactgt tggaaaatgc tatagatgca ggcgctacag aaataagcat tgaagtagag
     9601 gaatctggcg tccaatctat tcgcgtagtc gataatggaa gcggaattga agcggaagac
     9661 ttaggattag tatttcatag acatgcgact agtaaattag atcaagatga agatttattt
     9721 catattagga cattaggatt ccgtggtgaa gcactagcca gtatttcatc agttgctaaa
     9781 gtaacattga agacttgcac ggataatgct aatggaaatg aaatatatgt agaaaatggt
     9841 gaaatattaa atcataagcc tgcaaaagcg aaaaaaggaa cagatatact tgtagaatca
     9901 ttattttata atacaccagc acgtttaaaa tatattaaaa gtttatacac tgaactaggt
     9961 aaaataacag atattgtcaa cagaatggca atgagccatc cggacattcg aatagcactc
    10021 atttcagatg gcaaaacaat gttaagtaca aatggttcag gacgaactaa tgaagtgatg
    10081 gcagagattt atgggatgaa agttgcacga gatttagtac atatatctgg agatacaagt
    10141 gattatcaca ttgaaggttt tgttgcaaag cctgaacatt ctagaagtaa taagcactat
    10201 atttctattt ttattaatgg acgatacatt aaaaacttta tgctaaataa agcgatttta
    10261 gaaggctatc atacactctt aacaataggt aggttcccga tttgttatat taatattgaa
    10321 atggatccaa tcttagtaga cgtaaatgtt catccaacaa aactagaagt gcgtttatca
    10381 aaagaagagc aactatacca attgattgtg agcaaaatac aagaagcatt taaagaccgt
    10441 atattaattc ctaaaaataa cttggattat gtgccaaaaa aaaataaagt attacattca
    10501 ttcgaacaac aaaaaatcga atttgaacaa agacaaaaca cagagaataa ccaagagaag
    10561 acgttttcat ctgaagaaag taacagtaag ccatttatgg aagaaaatca aaacgatgag
    10621 atagttataa aagaagattc atataatcca ttcgtaacga aaacatctga aagtttaata
    10681 gctgatgatg aatcttctgg ttataataat acacgtgaaa aagatgaaga ctacttcaaa
    10741 aaacaacaag aaattttaca agaaatggat caaacatttg attcaaatga tgatacaact
    10801 gtgcaaaatt atgagaataa agcgtctgat gattattatg atgtaaacga tattaaagga
    10861 acaaaaagta aagaccctaa acgaagaatt ccatatatgg aaattgttgg acaagtacat
    10921 ggaacgtata ttattgctca aaatgaattt ggcatgtaca tgattgacca gcatgcagct
    10981 caagaaagaa taaaatatga atattttcga gataaaatag gtgaggttac caatgaagta
    11041 caagatttat taatcccgtt aacatttcat ttttcaaaag atgaacaatt agtcattgat
    11101 caatataaaa atgagcttca acaagtaggt atcatgttag aacattttgg tggtcatgat
    11161 tatattgtaa gtagctatcc agtttggttc cctaaagatg aagtagaaga aattattaaa
    11221 gatatgattg agctaatttt ggaagagaaa aaagtagata tcaaaaaatt acgtgaagat
    11281 gtagcaatca tgatgtcatg taaaaaatcc attaaagcga atcattattt acaaaaacat
    11341 gaaatgtctg atttaattga tcaattaaga gaagcggaag atccatttac atgtccacat
    11401 ggtcgtccaa taatcattaa tttttcaaaa tacgaattag aaaaattatt taagcgtgtg
    11461 atgtagagag gatgaatcaa gtgaataaca acatattgcc tgctataaga aacattaaag
    11521 atttagagaa actgattaaa acagattata aaatgtgtgt gcttctagat atgcatatag
    11581 gacatataaa aagtattatg gaattgctga agcaaaatca tatagagtgt tttattcata
    11641 tagatttgat aaaaggttta agccacgatg aatttgcaag tgaatttatt attcagcaat
    11701 acaagccaaa aggtatcgta tcgactaaat ctaaagtaat aaaaaaagct aaatcattaa
    11761 atactttaac gatttttaga gtatttatta ttgatagtca agcattgaaa cgcagtatag
    11821 atttgataaa aaaagttgaa cctgattttg ttgaagtact tccaggtgtt gcgagtaaag
    11881 cgattcatca tattcagaaa gaaacaaaca cacaagtcat tgcaggtggc ctaattaata
    11941 caatagatga agtcaatgaa gctgttaaaa atggagcgaa atatgtaaca actagttatg
    12001 ataaactttg gtaaatcata agtctgcaaa aatttcattt ttcacgagat ttagtcatat
    12061 aacataataa aaaagccgtt ttcatatggg atatgcagta ggtatcatac aaaaaataat
    12121 caaataaaat aattagcacc tctaaaacga ttaaaatcat taaagtttta gaggtgttta
    12181 ttattaaaaa atgcaactgg tcataaaaaa tatggctgaa gaatgtcaat taaacataat
    12241 ggcgtcataa ataaattagt taggattggt atttctagtt ttcaaattaa actactttta
    12301 taaagacttg aaaaattaaa tttgacaaaa tttttacaaa aaccattgac aacgctttca
    12361 tatcgatagt atcataacaa atataataaa agttaataca tagaatagag acgggagatt
    12421 tctacgagcc aaactgctag tgtaggaatc tctttgtctt tttgggagga catttaatat
    12481 gaatgtatat ttagcagaat tcctaggaac tgcaatctta atcctttttg gtggtggcgt
    12541 ttgtgccaat gtcaatttaa agagaagtgc tgcgaatggt gctgattgga ttgtcatcac
    12601 agctggatgg ggattagcgg ttacaatggg tgtgtttgct gtcggtcaat tctcaggtgc
    12661 acatttaaac ccagcggtgt ctttagctct tgcattagac ggaagttttg attggtcatt
    12721 agttcctggt tatattgttg ctcaaatgtt aggtgcaatt gtcggagcaa caattgtatg
    12781 gttaatgtac ttgccacatt ggaaagcgac agaagaagct ggcgcgaaat taggtgtttt
    12841 ctctacagca ccggctatta agaattactt tgccaacttt ttaagtgaga ttatcggaac
    12901 aatggcatta actttaggta ttttatttat cggtgtaaac aaaattgccg atggtttaaa
    12961 tcctttaatt gtcggagcat taattgttgc aatcggatta agtttaggcg gtgctactgg
    13021 ttatgcaatc aacccagcac gtgatttagg tccgagaatt gcacatgcga ttttaccaat
    13081 agctggtaaa ggtggttcaa attggtcata tgcaatcgtt cctatcttag gaccaattgc
    13141 cggtggttta ttaggtgcag tggtatacgc tgtattttat aaacatacat ttaatattgg
    13201 ttgtgcaatt gcaattgttg tagttattat tactttgatt ttaggttaca ttttaaataa
    13261 atcatcaaaa aaaggtgata tcgaatcaat ttactaaaat aaaaagaaac gtaaatagca
    13321 taatttaaca tgtttgattc atggattatg ctattttttc gccaaaattt aacagatttt
    13381 gtacaatggg ttagcgatta ttttttaata aaggagatac tactaatgga aaaatatatt
    13441 ttatctatag accaaggaac aacaagctca agagcgattt tattcaatca aaaaggggaa
    13501 attgcagggg tagcacaacg tgagtttaag caatattttc cacaatcagg ttgggttgaa
    13561 catgatgcaa atgaaatttg gacatctgtg ttagctgtaa tgacggaagt aattaatgaa
    13621 aatgatgtta gagctgatca aattgcaggt atcggtatta caaaccaacg tgaaacaacg
    13681 gttgtttggg acaaacatac tggccgccca atttatcacg caattgtttg gcaatcacgt
    13741 caaacacaat caatttgttc agaattaaaa caacaaggat atgaacaaac atttagagat
    13801 aagacaggat tacttttaga tccgtatttt gcaggtacaa aagttaaatg gattctagac
    13861 aatgttgaag gtgcacgaga aaaagcagaa aatggcgatc tattatttgg aacgattgat
    13921 acttggttag tatggaaatt atcaggaaaa gctgcgcata ttactgatta ttcaaatgcg
    13981 agtcgtacat taatgtttaa tatccatgat ttagaatggg acgatgagtt attagaacta
    14041 cttacagtac ctaaaaatat gttgccagaa gttaaagctt cgagtgaagt atatggtaag
    14101 acaattgatt accacttcta tggtcaagaa gtaccaatcg ctggagtagc tggtgatcaa
    14161 caagcagcat tatttggaca agcttgcttc gaacgtggtg acgtgaaaaa cacatatgga
    14221 actggtggct tcatgttaat gaatacaggt gacaaagcgg ttaaatctga aagtggttta
    14281 ttaacaacaa ttgcttatgg tattgatgga aaagtaaatt atgcgcttga aggttccatc
    14341 tttgtttcgg gttcagcaat ccaatggtta cgtgatggat taagaatgat taattcagca
    14401 ccacaatcag aaagttatgc gacacgagtt gactctactg agggtgttta tgttgttcca
    14461 gcttttgtag gtttaggaac accatattgg gattctgaag cacgtggtgc gattttcggt
    14521 ttaacacgtg gaactgaaaa agagcacttt atccgtgcaa ctttagaatc attatgttac
    14581 caaactcgtg acgttatgga agcaatgtca aaagactctg gtattgatgt ccaaagttta
    14641 cgtgtcgatg gtggtgcagt taaaaataac tttattatgc agttccaagc agacattgtt
    14701 aatacttctg ttgaaagacc tgaaattcaa gaaactacag ctttaggtgc tgcattttta
    14761 gcaggattag cagttggatt ctgggagagt aaagatgata tcgctaaaaa ctggaaatta
    14821 gaagaaaaat tcgatccgaa aatggatgaa ggcgaaagag aaaaattata tagaggttgg
    14881 aaaaaagctg ttgaagcaac acaagttttt aaaacagaat aaacttgtag attagacttt
    14941 tgtataaaca ttgtgataca atcaatttaa gttaatattt gaatcgagaa acgagagatt
    15001 tgttcgaaca tgtacaattg aaggattgtt tatgtgggac aagtctctcg tttttacatt
    15061 ttttaggagg cgttttggaa tggcattgtc tacttttaag agagaacata ttaaaaagaa
    15121 tttaagaaat gatgaatatg atttagtaat tattggtggc ggtattacag gtgcaggtat
    15181 tgcactagac gcgagtgaaa gaggaatgaa agttgcatta gttgaaatgc aagactttgc
    15241 acaaggaaca agctcaagat ctacaaaatt agtccatggt ggtttgcgtt acttaaaaca
    15301 attccaaatt ggagtagttg ccgaaactgg taaagaacgt gcgattgttt atgaaaatgg
    15361 gcctcatgtt acgactccag agtggatgct tttaccaatg cataaaggtg gaacatttgg
    15421 taaattctca acatcaattg gtttaggaat gtatgatcgt ttagcaggtg ttaagaagtc
    15481 tgaacgtaaa aaaatgttat ctaaaaaaga aactttagct aaagaaccat tagttaaaaa
    15541 agaaggtcta aaaggcggcg gttactatgt tgaatatcgt actgacgatg cgcgtttaac
    15601 tattgaagtt atgaagcgtg ctgctgaaaa aggcgcagaa attatcaact atactaagtc
    15661 tgaacacttc acttatgata aaaatcaaca agtaaatggt gttaaagtta ttgataaatt
    15721 aactaatgaa aattatacaa ttaaggctaa aaaagtggtt aatgcagcag gtccatgggt
    15781 tgatgatgtt agaagtggtg attatgcacg caataataaa aaattacgtt taactaaagg
    15841 tgtacatgtt gttattgatc aatcaaaatt cccattaggt caagcagtat actttgatac
    15901 tgaaaaagat ggaagaatga tttttgcaat tccacgtgaa ggaaaagcgt atgtaggtac
    15961 tacagataca ttctatgaca atatcaaatc ttcaccatta actacacaag aagacagaga
    16021 ctatttaatc gatgcgatta attacatgtt ccctagtgtt aatgttacag atgaagatat
    16081 tgaatcaaca tgggcaggaa ttagaccatt aatttacgaa gaaggcaaag acccttctga
    16141 aatctctcgt aaggatgaaa tttgggaagg taaatcaggt ttattaacta ttgcaggtgg
    16201 taaattaaca ggctatcgtc acatggctca agacattgtt gatttagtat ctaaacgctt
    16261 gaaaaaagac tacggtttaa catttagtcc atgtaataca aaaggtctgg caatttcagg
    16321 tggcgatgta ggaggtagca agaactttga tgcgtttgta gagcaaaaag tagatgtagc
    16381 taaaggattc ggcattgatg aagatgttgc aagacgttta gcatctaaat atggttcaaa
    16441 tgttgatgaa ttgttcaaca ttgcgcaaac atctcaatac catgatagca agttaccatt
    16501 agaaatttat gtagaacttg tttatagtat tcaacaagaa atggtataca aacctaacga
    16561 tttcttagtt cgtcgttctg gtaaaatgta cttcaatatt aaagatgtat tagattataa
    16621 agatagtatc atcgatatta tggctgatat gttagactac tcaccagctc aaattgaggc
    16681 ttatactgaa gaagttgagc aagcaattaa agaagcgcaa catggaaata atcagccagc
    16741 agttaaagaa taattaattt gtacaatcat aaactggtgt cctgttttag gggcatcagt
    16801 ttttttatat gagatacatt agtcaattga aactatgcat cactaaatgt atgataataa
    16861 taaaagcgaa tataaaaacg ttgttattaa aggtgtgaga tgatgactga aaaacaattt
    16921 aaattaactg tacaagataa cacgaatatt gaagttaaag tgaattttac agatgtagat
    16981 tcaaaaggaa ttattcatat atttcatggt atggctgaac atatggaacg ttacgataaa
    17041 ttagcacatg cactttcaaa ggatggcttc gatgtgatat gtcataatca tcgaggacat
    17101 ggtattaata ttgatgaatc aacaagaggg cattacgatg atatgaaacg agttatcggt
    17161 gatgcctttg aagtagcgca aacagtgaga ggcaatgttg ataaaccata cattataatc
    17221 ggacattcaa tgggatccgt tatagctaga ttgtttgtag aaacatatcc gcaatatgtt
    17281 gatggtctaa ttttaagtgg gacagggatg tatccattat ggaaaggatt accaaccgtt
    17341 aaggtgttac aactgattac aaaaatttat ggtgctgaga aacgggttga atgggttaac
    17401 cagttagtat caaatagttt taataaaaaa atacgtccat tacgtacaca aagtgattgg
    17461 atttctagta atccaactga agtagacaac tttattaaag atccatatag tggatttaat
    17521 gtgtcaaatc aattattata tcaaacagcc tattatatgc tacatacatc acaattaaaa
    17581 aatataaaaa tgttaaatca tgccatgcct atattattag tttcaggatg tgacgatcct
    17641 ttaggtgatt atggtaaagg gattttaaaa ttggcgaata tatatagaaa agctggcatt
    17701 aaaaatgtta aagtgaatct ttatcatcat aaacgtcatg aagtgttatt tgaaaaagat
    17761 catgacaaaa tttgggaaga cttgtttaaa tggttgaatc aattttataa aaaataaaga
    17821 aagtggaatt aaatatgaat aaaaataagc cttttattgt agtaattgtg gggccaactg
    17881 cttcaggtaa aacagagctt agcatagaac tcgcgaagcg tatcaatggt gaaatcataa
    17941 gcggtgattc tatgcaagtc tacaaacata tgaatattgg aactgcaaaa gtaacacctg
    18001 aagaaatgga tggtattcca catcatttaa ttgatatctt gaatcctgat gatacatttt
    18061 cagcatatga attcaagcga ttagcagaag atttaattac tgatataacg aatagaggta
    18121 aagttccaat catagcaggt ggaacaggct tatatattca atcattaata tataattatg
    18181 aattagaaga tgaaacagtt acacctgcac aattatccat agttaaacaa aagttatctg
    18241 cattagaaca tttagataat cagcaactac acgattattt agatcaattt gatgcggttt
    18301 ctgcagaaaa tattcaccct aacaaccgcc aaagagtgtt gcgcgctatt gaatattatt
    18361 taaaaacaaa aaaacttttg agtaatcgca agaaagtgca acaatttact gaaaattatg
    18421 atacattatt attagggatt gaaatgtcgc gcaaaacatt atattcaaga ataaataaac
    18481 gtgttgatat tatgttggat cacggattat ttagagaagt gcaacaactt gttgaacaag
    18541 gctatgaatc ttgccaaagt atgcaagcta ttggatataa agaattaata cctgtgatta
    18601 acggacaaat gatttatgaa gatgctgtca atgatttaaa gcaacattca cgccaatatg
    18661 caaaacgaca aatgacatgg ttcaagaata aaatgagtgt tcattggtta gataaagaaa
    18721 atatgtcact tcaaatgatg ttagatgaga ttacaaccca gattaagtaa aaggagtccg
    18781 acagatgatt gcaaacgaaa acatccaaga caaagcacta gagaatttta aagcaaacca
    18841 aactgaagta actgtattct ttctaaacgg tttccaaatg aaaggtgtta ttgaagaata
    18901 cgacaagtat gtcgtaagct taaattctca aggcaaacaa cacttgattt acaaacatgc
    18961 gatcagcact tatacagtag aaactgaagg tcaagcatct actgaaagtg aagaataagt
    19021 tgtaatcata tgggcacgat ttaatgactc gtgtacataa cgtttgaagt atgataaata
    19081 gatatagaaa taaagtcata tgtgacatca attaaatgat gttcaaatga caagatacaa
    19141 tagaggaatg tttgtaataa aaacgcttca tataatggtc gagtcaatat atgatacgac
    19201 tttatatgaa gcgttttatt tgctatgagc tagtatattt tataataact tttctatttc
    19261 tctttcgatt tgaacaggtt ttttttgagg tgcaaatcgt ttaacaacgt taccttcgcg
    19321 atccactaaa aacttagtga aattccattt gattttctca ttaaagaatc catgttgtgc
    19381 cgcagtcaaa tatctaaata aaggtaattg atgttcccct tttacgtcta ttttttgatg
    19441 catagggaag gtaacaccat agtttaattt acagttttga gctgcttctt cgcctgatcc
    19501 aggttcttgg ccaccaaatt gattacaagg gaaacctaga attacaaacc cttgatcttt
    19561 gtatttctcg tataatgatt gcaaaccttc aaattgtgaa gtaaagccac attcgctagc
    19621 tgtattaaca attagcataa cgtcaccctt atatgcatct aatttgtaag taacaccttt
    19681 atttgtttct actacaaaat cataaattgt ctccattgaa tcatcctttc gatttactta
    19741 aaatgtacca taaaatcgtg taatagtctt tactaaaact ctatgataga atactttgag
    19801 taggatttta ttaaggagat gtataacatg gctcagcaac aaattcatga tattaaaatt
    19861 aaactagaaa aagctgtctt agtcggtgta catgctcaag atgataagca atttaatttt
    19921 gagtctacaa tggaggaatt atcatcttta tcagagactt gccaacttga agtgttgggt
    19981 caaattactc aaaacagaga tcgtgtagat cgcaaatatt atgttggtaa aggtaaaatt
    20041 gaagaaattc aagcatttat tgagttcaaa gatattgatg tagtcatcac aaatgatgaa
    20101 ttaacgactg cacaatccaa atcactaaat gaagctttag gtgtaaaaat tattgataga
    20161 actcagttga ttcttgaaat atttgcatta agagcaagaa gtaaagaagg taaattgcaa
    20221 gtagagctag cacaacttga ttatttatta cctagattgc aaggccatgg taaaagcctt
    20281 tctcgtttag gtggcggtat tggaactaga ggccctggtg aaacgaagtt agagatggat
    20341 cgcagacata ttcgaactcg tatgaatgaa attaaacatc aattgcggac ggtagaagaa
    20401 catcgcgaaa gatatcgaaa taaaagaaat caaaatcagg tgtttcaagt agctttagtt
    20461 ggttatacaa atgctggtaa atcatcatgg tttaatgttt tagcaaatga agagacgtat
    20521 gaaaaagatc aattatttgc aacgttagat cctaaaacac gacaaattca aataaatgat
    20581 ggatttaatt taattatttc agatactgtt ggttttatac agaaactacc tacgacgtta
    20641 attgcagctt ttaaatcaac tttagaagag gctaaaggtg cggatttatt agtacatgtc
    20701 gtagatagta gccatcctga ataccgtaca cagtatgaca cagttaatga tttaatcaaa
    20761 caattagata tgagtcatat ttctcaaata gttattttta ataaaaagga cttatgtgat
    20821 catgcatcaa atcgtccagc aagtgatttg cctaatgttt ttgtttcttc taaaaatgat
    20881 ggtgataaat tacttgttaa gacgttattt attgatgaaa tcaaaaggcg attaacttat
    20941 tatgatgagg caattgcgac gaataatgca gatcgattat attttctaaa acaacataca
    21001 ttagtgactg aacttaaata tgatgaaatt gaaaatgttt atcgtataaa aggatttaaa
    21061 aaataataaa aggacgaaat tcaaatgaaa gatataagta agatagtagc tgacgtcgaa
    21121 tcaacgttag caccatattt taaagaaatt gaagaaacag catatattaa tcaagaaaaa
    21181 gtattaaatg cgtttcatca tgtcaaagca accgaaagtg atttacaagg atcaacaggt
    21241 tacgggtatg atgattttgg acgtgaccat ttagaagaaa tatatgcgca ggcatttaaa
    21301 gcagaagatg caattgttcg tccgcaaatt atttcaggta cgcatgcgat tactattgca
    21361 ttacaaagtt tattaaaaca tggtgatgaa ttaatttata taacgggtag tccatatgac
    21421 actttacttg aagtcattgg cgtaaacgga aatggtattg aaagtttaat ggagtacggc
    21481 gtatcgtata aagatattgc acttaaagaa ggtaaaatcg atattgaaag tgtgttagat
    21541 ggggtttctg agcgcaccaa agtaatagcg attcaacgtt cgaaaggcta tgatcaaaga
    21601 ccttcaattc ctctagatga aattgaacag gtgattatta ggttgaaaga agtgcatcct
    21661 aatattttaa tatttgtgga taactgttat ggggaatttg tagaaagacg tgaacctata
    21721 gaatgtggtg ccgatttaat agcaggatca ttaattaaaa accctggcgg tggtttagct
    21781 aagattggtg gatacattgc tggtagaaaa gatttaattg aacgatgtgg ttatagattg
    21841 acagcacctg gtattggtaa agaagcaggt gcatcattaa atgcattgct tgaaatgtat
    21901 caaggtttct ttttagcacc acatgttgtc agtcagagtc ttaaaggggc attgtttact
    21961 agtttatttt tagaaaaaat gaatatgaac acaacgccga agtactacga aaaacgaact
    22021 gatttaattc aaacagttaa atttaaaacg aaagaacaaa tgatttcatt ttgtcaaagt
    22081 attcaacacg catccccaat taatgcacat tttagtccag aaccgagtta tatgcctggt
    22141 tacgaagatg atgttattat ggctgctggt acgtttattc aaggttcatc gattgaatta
    22201 tctgcagatg gacctattcg tcctccttat gaagcgtatg ttcaaggagg attaacatat
    22261 gaacacgtta aaattgctgt gacaagagct gttaatcagt tgaaagaaca aggacttata
    22321 taatagatta aatttcaccc taaatgataa tgtattttgg gtgaaatttt tttgcggaga
    22381 tttatcagat tattt
//
LOCUS       DAKPJH010000036        21771 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.036, whole genome shotgun sequence.
ACCESSION   DAKPJH010000036 DAKPJH010000000
VERSION     DAKPJH010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21771
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.036"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..1568
                     /gene="asp2"
                     /locus_tag="OY092_001164"
     CDS             <1..1568
                     /gene="asp2"
                     /locus_tag="OY092_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HCX1076116.1"
                     /translation="PRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAI
                     EAIVEAEGRFDFIYIQAPYSETLTNLFQMISEPYNTYVDESFWSVEYEQDENVQKYVV
                     QPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFG
                     KEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTD
                     DMLDSPLEIPTKPFDAYISVTVKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQ
                     RQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYI
                     GSSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPLV
                     NIGTIAEHMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVFA
                     IAYMQHDDYDPHAFQELLPVLTAHQARVMNCSIPGRHNDDSPTIASWFVNFYNIILED
                     KFGRVQHAEKQNI"
     gene            1546..2505
                     /gene="asp3"
                     /locus_tag="OY092_001165"
     CDS             1546..2505
                     /gene="asp3"
                     /locus_tag="OY092_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HCX1076117.1"
                     /translation="MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVTFINPLMPSGLP
                     IHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNGTKLST
                     EIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQDDLEYKSMRVTKIG
                     DDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLKNDLQS
                     QDTLKAINLISYGSKSNVFATYVAQHLDCKVYRTSHEDDDLKEWLTEHVPGNHELKDT
                     NVEVYFKEEQDNHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET"
     gene            2495..4885
                     /gene="secA2"
                     /locus_tag="OY092_001166"
     CDS             2495..4885
                     /gene="secA2"
                     /locus_tag="OY092_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HCX1076118.1"
                     /translation="MKHKLDVTINELRLKSIRKIVKRINTWSDEVKSYSDDALKQKTI
                     EFKERLASGVDTRDTLLPEAYAVAREASWRVLGMYPKEVQLIGAIVLHEGNIAEMQTG
                     EGKTLTATMPLYLNALSGKGTYLITTNDYLAKRDFEEMQPLYEWLGLTASLGFVDIVD
                     YEYQKGEKRNIYEHDIIYTTNGRLGFDYLIDNLADSAEGKFLPQLNYGIIDEVDSIIL
                     DAAQTPLVISGAPRLQSNLFHIVKEFVDTLIEDVHFKMKKTKKEIWLLNQGIEAAQSY
                     FNVEDLYSEQAMVLVRNINLALRAQYLFESNVDYFVYNGDIVLIDRITGRMLPGTKLQ
                     AGLHQAIEAKEGMEVSTDKSVMATITFQNLFKLFESFSGMTATGKLGESEFFDLYSKI
                     VVQVPTDKAIQRIDEPDKVFRSVDEKNIAMIHDIVELHETGRPVLLITRTAEAAEYFS
                     KVLFQMDIPNNLLIAQNVAKEAQMIAEAGQIGSMTVATSMAGRGTDIKLGEGVEALGG
                     LAVIIHEHMENSRVDRQLRGRSGRQGDPGSSCIYISLDDYLVKRWSDSNLAENNQLYS
                     LDAQRLSQSSLFNRKVKQIVVKAQRISEEQGVKAREMANEFEKSISIQRDLVYEERNR
                     VLEIDDAENRDFKALAKDVFEMFVNEEKVLTKSRVVEYIYQNLSFQFNKDVACVNFKD
                     KQAVVTFLLEQFEKQLALNRKNMQSAYYYNIFVQKVFLKAIDSCWLEQVDYLQQLKAS
                     VNQRQNGQRNAIFEYHRVALDSFEVMTRNIKKRMVKNICQSMITFDKEGMPVIHFP"
     gene            4903..6411
                     /gene="gtfA"
                     /locus_tag="OY092_001167"
     CDS             4903..6411
                     /gene="gtfA"
                     /locus_tag="OY092_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HCX1076119.1"
                     /translation="MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQ
                     SENIQTLTQNIGFKDQEVIWLYQYFSDISIAPTTYTLDDVERELGHDISFRERNGKIV
                     RLYFNGKSSFVTCYLQNEQKDVVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAK
                     LYMRQFYNEDGSIAYNEYIDGDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILD
                     RASDIGQAVLQHKGDSKVGVVIHADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFIT
                     ATDIQNHMVCRQFEQYQGYRPRVYTIPVGSIDALSYPTLSRKPYAMISASRLANEKHI
                     DWLVKAVIVAKRQVPELTFDIYGEGSEKTRLRKIIDTHRAQDYIRLLGHVKLDEIYND
                     YELFLSASTSEGFGLTLMEAVGSGLGMIGLNVNYGNPTFIRDGENGYLVPFDTDEDSV
                     DDVVAKLAHAIVMYFNNGPQTPHDISYEVAQQFMTQDIILKWETLVQEVLHD"
     gene            6404..7762
                     /gene="gtfB"
                     /locus_tag="OY092_001168"
     CDS             6404..7762
                     /gene="gtfB"
                     /locus_tag="OY092_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HCX1076120.1"
                     /translation="MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVIS
                     PYQFFADNHNTENMKPRFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPR
                     IVSRVEWFDDQQRVRFVDYYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVT
                     SDVILDWQGKSYFFPSKLAFVLFFIKQLEITEHHFVINSLALPFSVLYNLPSNGSDVL
                     VWQEQCDGNVPGNMQLMCKGDMKRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLY
                     NYRSRNRYTKEIVILTNSDQLRNIKVLVETLPDFKFHIAAITEMSDKLMQLDQYANVH
                     LYPSINIDRVNELYQLCDIYLDINEGNEILNAVEQAFDYELLILGYRQTAHHAKVTLS
                     EHLFEHNDEITMESKDQLIQMLESLKDQQQFRDALLAQKAHAHEISREQFEQVFKQAL
                     ES"
     gene            8004..9911
                     /gene="sasF"
                     /locus_tag="OY092_001169"
     CDS             8004..9911
                     /gene="sasF"
                     /locus_tag="OY092_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-wall-anchored protein SasF"
                     /protein_id="HCX1076121.1"
                     /translation="MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTE
                     ISKEILSKQDLLDKVDKANRQIEQLKQLSASSKAHYKAQLNEAKTASQIDEIIKRANE
                     LDSKDNKGSQIEMNGQSDIDSKLDQLLKDLNKVSSKVDRGQQSGKDDLNAMKNDMSQT
                     ATTKYGEKDNENDEAMVDKALEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAK
                     TPNNDGSGHVVLNKFLSNEENQSHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTY
                     HKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEELARTDDKKYAT
                     QSILESIFNKDEADKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQ
                     DKSLLISQILQTKLGKAEADKLAKDWTNKGLSNRQIVNQLKKHFASTGDTSSDDILKA
                     ILNNAKDKKQAIETILATRIERQKAKLLADLITKIETDQNKIFNLVKSALNGKADDLL
                     NLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSNLLDSIPD
                     IPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIW
                     LSRRNKLKNKA"
     gene            10078..10638
                     /locus_tag="OY092_001170"
     CDS             10078..10638
                     /locus_tag="OY092_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HCX1076122.1"
                     /translation="MSRKTALLVLDMQEGIASSVPRIKNIIKANQRAIEAARQHRIPV
                     IFIRLVLDKHFNDVSSSNKVFSTIKAQGYAITEADASTRILEDLAPLEDEPIISKRRF
                     SAFTGSYLEVYLRANDINHLVLTGVSTSGAVLSTALESVDKDYYITVLEDAVGDRSDD
                     KHDFIIEQILSRSCDIESVESWKSSL"
     gene            complement(10905..12764)
                     /locus_tag="OY092_001171"
     CDS             complement(10905..12764)
                     /locus_tag="OY092_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase domain-containing protein"
                     /protein_id="HCX1076123.1"
                     /translation="MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSK
                     KSNDDETSKDTTSKDTDKADNNNTSSQDNNDKKFKTIDDSTSGSNNIIDFIYKNLPQT
                     NINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND
                     TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDRANQKSSS
                     KDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKS
                     KPAQSFNNDINQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRI
                     GQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQL
                     YSINAGFRKYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYA
                     TDPNYAKKLNSIIKHYQLTQFDDERMPDLDKYERSIKDYDDSSDEFKPFREVSDSMPY
                     PHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVFEAGQF
                     GADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK"
     gene            12975..15956
                     /locus_tag="OY092_001172"
     CDS             12975..15956
                     /locus_tag="OY092_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HCX1076124.1"
                     /translation="MKNAFKLFKMDLKKVAKTPAVWIILAGLAILPSFYAWFNLWAMW
                     DPYGNTGHIKVAVVNEDKGDTIRGKKVNVGNTMVNTLKKNKSFDWQFVSREKADHEIK
                     MGKYFAGIYIPSKFTHEITGTLRKQPQKADVEFKVNQKINAVASKLTDTGSSVVVEKA
                     NEQFNKTVTRALLEEANKAGLTIEENVPTINKIKNAVYSADKALPKINDFANKIVYLN
                     NHQADLDKYANDFRKLGNYKGDILDAQKKLNEVNGAIPQLNEKAKLILALNNYMPKIE
                     KALNFAADDVPAQFPKINQGLNIASQGIDQANGQLNDAKDFVTQVRSRVGDYQDAIRR
                     AQDLNRRNQQQIPQNSAANNETSNSAPAAGNGVASTPPSVPSGDTAPNNNVTQNTAPN
                     GNNAPVSTTPQSTSGKKDGQSFADITTTQVSTANENTQNITDKDVKSMEAALTGSLLS
                     LSNNLDTQAKAAQKDSQALRNISYGILASDKPSDFRESLDNVKSGLEYTTQYNQQFID
                     TLKEIEKNENVDLSKEIDKVKAANNRINESLRLVNQLSNALKNGSSGTAEATKLLDQL
                     SKLDSSLSSFRDYVKKDLNSSLVSVSQRIMDELNKGQTALSNVQSKLNTIDQVINSGQ
                     AILKNGKTRIDRLQTVLPSIEQQYISAVKNAQANFPKVKSDVAKAANFVRNDLPQLEQ
                     RLTNATASVNKNLPTLLNGYDQAVGLLNKNQPQAKKALSDLADFSQNKLPDVEKDLKK
                     ANKIFKKLDKDDAVDKLIDTLKNDLKKQAGIIANPINKKTVDVFPVKDYGSGMTPFYT
                     ALSVWVGALLMVSLLTVDNKHKSLEPVLTTRQVFLGKAGFFIMLGMLQALIVSVGDLL
                     ILKAGVESPVLFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLQIAGGGGTFP
                     IQTTPQFFQNISPYLPFTYAIDSLRETVGGIVPEILITKLIILTLFGIGFFVVGLILK
                     PVTDPLMKRVSEKVDQSNVTE"
     gene            complement(16068..17006)
                     /gene="manA"
                     /locus_tag="OY092_001173"
     CDS             complement(16068..17006)
                     /gene="manA"
                     /locus_tag="OY092_001173"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HCX1076125.1"
                     /translation="MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGP
                     NTIINGPYKDMTLDQLWSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALK
                     HEGELGKTECWYILDAAPGAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFY
                     YVPAGTVHAIGSGILILETQQSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNH
                     EPNTTPITTHIDTHTVTQFVDNQYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTV
                     NDKHYDIPKGSSFILTTEDEDIHFVGNISAIVSHPG"
     gene            complement(17020..18972)
                     /locus_tag="OY092_001174"
     CDS             complement(17020..18972)
                     /locus_tag="OY092_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIABC"
                     /protein_id="HCX1076126.1"
                     /translation="MKIVAITSCPNGIAHTYMAQEKLEQVAKEMGVDIKVETQGGVGA
                     ENVLTTQDIEEADGVIIAADKQVDLSRFVGKRLINENVREGIHNPRGLIQRIINQDAP
                     IYQSETNYHSKDRGKSKSGIQMVYQHLMNGVSFMVPFIVVGGLLIAIALTLGGETTSK
                     GLVIPDDSFWKSIENIGSLAFKFMVPILAGYIAVSIADKPGLVPGMIGGAIAADGSFY
                     GSDAGAGFLGGIVAGFLAGYIAKWIKDIKVPKAMAPIMPIIIIPIISSVVVGLIFIFL
                     IGAPISNIFEALTTWLKSMQGANIIILAMIIGAMIAFDMGGPVNKVAFLFGSALIAEG
                     NYAVMGMVAVAVCTPPIGLGLATFVQKYKFNHSEREMGKASFTMGLFGITEGAIPFAA
                     QDPLRIIPANIIGAMIASVIAAIGGVGDRVAHGGPIVAVLGGIDHVLLFIFAVIVGSL
                     VTMTTVLLLKRNTPVIAVDAPAQHTQLHDTDITQHDTEVDNVDNTAKHSHHNKPSHVF
                     DQQTMIITDHDMSRNEAIDMLIHKLKICRYVEHTSHLKNAILEREMESTTAIGMNVAI
                     PHAKSDVVKQPIVAVMKNNHGVKWESLDGSLPQLIFLIAVPNNSQDTHLKILQRLSKA
                     LMNDETRQSLINANSTTEIYNLLMKI"
     gene            complement(19049..20923)
                     /locus_tag="OY092_001175"
     CDS             complement(19049..20923)
                     /locus_tag="OY092_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HCX1076127.1"
                     /translation="MLDRHLKLLQFFIKNPSKHISSNEIAEHVNVSNRTVRNDIHVIN
                     SNFMDDIIVSIKSKGYQLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQT
                     LQQLEQDYLLSKTVLNDYFIRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLN
                     QLSSGHVHVEDLILNELPDSHQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKR
                     KQSLSELDTLNHDAKLISQSCIKQINERLGYDLNEQVINMFSFFIAYHFNKLDIGIER
                     IFIQSYIDRLIELMQQRIHVPFNEDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIK
                     KLYPFVFNTLFEAIDKLAVDTDIEMSEDEIAFLTIHFQAAIERRTKTQLNVVIACYYG
                     LGVSNFLETKINNLSEELLVINTIKLENITHYHFDNVDLLITTHDIPKQTLNILPKHL
                     STIKVAPLFSEDDRHKIRHIVKQKQNPVQAHHHMDTVNFLVVNTEQKPRHTVQIFEEA
                     QKILQAHHAIVEGYIESALEREKSSSTYIGNFMAIPHGDPEKVLQSHVLIFRTKDVFP
                     WRQHDVKLVFFLAISQKDTAFTKQMMQLIANLDDDSVNHLCNLDDHSLKQQLFEYLQE
                     "
     gene            complement(21163..21636)
                     /locus_tag="OY092_001176"
     CDS             complement(21163..21636)
                     /locus_tag="OY092_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000714021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076128.1"
                     /translation="MKKFLITVVIILLIGALGFAIYAAINHSTSSNHNNEQDNKATHQ
                     KKDTEVNHQKDENTNNTNENQNNNGVTNGNQSSTPSTVQNNGSTAPANTQPSNPNQSN
                     SNQSNPNQSNSNHGGSSQPSTNNQNHKQQNTPPANKSNNTNTPSKQTPQVQSPKN"
BASE COUNT         7398 a         3263 c         4114 g         6996 t
ORIGIN      
        1 tgccacgtaa atttagagtt ttgcaaattg gaggagacga tttagaacct attttccaac
       61 acaaaaaagg tgtgagttgg gattacttcg atattggatt gtttgaattt gatagtggtt
      121 atgtagaggc tattgaagcg attgttgaag cagaagggcg ctttgatttt atctatattc
      181 aagcaccata ctcggagaca ttaacgaatt tattccaaat gataagcgaa ccatacaata
      241 cgtatgttga tgaatcattt tggtctgttg aatatgaaca agacgaaaat gtccaaaaat
      301 acgttgttca accattacat taccggaaca ttgaagaacg taataataaa ttagaggcag
      361 ttagcttctc aggacagtat ggagataagg tttctcctaa gttagcactt gttcatccga
      421 attttaaagg agatgtcgtt taccaaggta attcagagct cacgttgagt ggagaatttg
      481 gaaaagaatt taaacctatc gcatcttggc aaaataatct cgtttacgat aaagataaag
      541 tcattcaaat atggccagaa tttgatattg atggtgcggt cgagttgcaa tatacattta
      601 gattgattca gactggcgct gatggtgcat taattgagca aatcatatta actgatgata
      661 tgttagacag tcctttagag atacctacga aaccatttga tgcatatata agtgtaactg
      721 ttaaggcgcg tggcaacggg acggtacatt taggacctat acacaaacga tggtctagat
      781 tagacatggg tcaattttta cttggtggta gtcgtttcgt agatagtcaa cgacaggaat
      841 ttatttatta tttccaccct ggtgatatga aaccaccact aaacgtatat tttagtggtt
      901 atcgaacagc ggaaggtttc gaaggatatt atatgatgaa acgtatgaat gcaccgtttt
      961 tacttatcgg cgatcctcgt gttgaaggtg gtagctttta tatcggttca tctgaatatg
     1021 aacaaggtat tatcaatgtt attgacgaga cattagaaaa gctgaatttt aaatcacatg
     1081 aattaatatt atctggttta tctatgggtt catttggtgc cttgtattat ggtgctcagt
     1141 taaatcctca ggcaattatt gttggtaaac cacttgttaa tattggaacg attgctgaac
     1201 atatgcgatt acttagacca gaagagttcg gtacagcatt agacgtcctg gtgtctaatg
     1261 aaggtgatac atctcaagcg tcgatacagg cattaaatca aaaattttgg caaacatttc
     1321 aaaagaaatc attgtcacaa actgtttttg ccatagcata tatgcaacat gatgattatg
     1381 atccacatgc atttcaagag ctattacctg tattgacagc acaccaagca agagtgatga
     1441 attgcagtat tcctgggcga cataatgatg attcacctac cattgcaagt tggtttgtta
     1501 atttttacaa cattattttg gaagacaagt ttgggagagt tcaacatgct gaaaaacaaa
     1561 acatttaaag ttacttggaa ttatatttca caaactacat ttatgtatgg ctctaaagta
     1621 tcattttcaa atggtgaagt gacttttata aaccctttga tgccctctgg attaccgatt
     1681 catgagtggt tgatgttaaa gcaattttca aaatataaaa gtgcgccaag tttaccaatt
     1741 ttgcgtagag gacagcatta taaattgcat tttgattttg atgcaacgcc tgctggttca
     1801 gtgtatttta tcatcatttt ttataataaa aatggcacaa aactaagtac tgagattgta
     1861 aagtcaaata gtatcacgat tcaatatcct gatgaagcct atgcttataa aataaaaatg
     1921 atgaatgcag catcgacgag tcttatattt agatgtttaa caatcacaga gatgacgcat
     1981 caagatgatt tagaatataa aagcatgcgg gtgacgaaga taggcgatga ccaatatgga
     2041 aatgatatga tcaatgtcat tattgcagaa ccatctgaca cctatccaac tatttcgaat
     2101 gattttttga aactgtttgg tcatgtttgg ctcgttgaac gttggatgga cgacaatatc
     2161 gagggaaata ttaagcaact aaagaatgat ttgcaaagtc aagataccct aaaggctatt
     2221 aatttgatta gttatgggtc aaagtcaaat gtttttgcaa cttatgtcgc tcagcatttg
     2281 gattgcaaag tgtatcgtac aagccatgaa gatgatgatt taaaagaatg gcttacagaa
     2341 catgtcccag gaaatcatga actaaaagat acaaatgtcg aggtttattt taaagaagag
     2401 caagacaacc atctaaacta tatgtcacgt ttaatgaatc cagtacgatt tttagattac
     2461 ttagatgtat cgaaactgaa tggtggggaa gtaaatgaaa cataaactag atgttacgat
     2521 aaacgaatta agactaaagt cgattagaaa aatagtgaaa cgcatcaata catggagcga
     2581 tgaagttaaa tcatattctg atgatgcgtt aaaacaaaag acaatagaat ttaaagaacg
     2641 tttagcatca ggagttgata cacgagatac attgttgcct gaagcttatg cagtggcacg
     2701 tgaagcgagc tggagagtat taggtatgta tcctaaagaa gttcagttaa tcggagcgat
     2761 tgtattgcat gaaggtaaca ttgcggagat gcaaacaggc gaaggtaaaa cattaacagc
     2821 aacgatgcct ttatatttaa atgcactttc gggaaaagga acatatttaa ttacaacgaa
     2881 tgattattta gcgaagcgtg attttgaaga gatgcaacca ttatatgaat ggttaggttt
     2941 aactgcttca ttaggttttg ttgatattgt ggattatgag tatcaaaaag gggaaaaacg
     3001 taatatatat gaacatgata ttatatatac aactaatgga cgtctcggtt ttgattattt
     3061 aattgataat ttggctgata gtgcggaagg aaaattttta ccacaattaa attacggtat
     3121 tattgatgaa gtggattcaa tcattttaga tgctgcgcaa acaccattag ttatttcggg
     3181 tgcaccaaga ttacaatcaa atctatttca tattgtgaaa gagtttgtag atacattgat
     3241 tgaagacgtg cattttaaaa tgaagaagac caaaaaggaa atatggctgt taaatcaagg
     3301 tattgaagcg gcacaatcat actttaatgt tgaagattta tatagcgaac aagcgatggt
     3361 cctagtgcgt aatattaatc tagcactgcg cgcgcaatat ttgtttgaat ctaatgtcga
     3421 ttacttcgta tataatggtg atattgtttt aattgaccgt attacaggtc gtatgttacc
     3481 ggggactaag ttgcaagctg gacttcacca agctattgaa gcgaaagaag gtatggaggt
     3541 ttcaacagat aaaagtgtta tggcaacaat taccttccag aatttattta aactttttga
     3601 atcattttca ggtatgacag ctacaggaaa attaggcgaa tcagagttct ttgatttgta
     3661 ttcaaaaata gtcgtacaag taccaactga taaagcgatt caacgtatcg atgaaccaga
     3721 taaagtgttt cgttcagttg atgagaaaaa catcgcgatg attcatgata ttgttgaact
     3781 tcatgaaacg gggagaccgg ttttactcat aacgagaact gctgaagcgg ctgaatactt
     3841 ttcgaaagta ttattccaaa tggatattcc taataattta ctcattgcgc aaaatgttgc
     3901 aaaagaagcg cagatgatag ctgaagcagg gcaaattggt tccatgactg ttgcgactag
     3961 tatggcaggt cgaggcacag atattaaact tggtgaaggt gtcgaagcat taggtggatt
     4021 agctgttatt attcatgaac atatggaaaa tagccgtgta gacaggcaat tacgtggtcg
     4081 ttctggtaga caaggggatc cgggatcatc ttgtatatat atttcactag atgattattt
     4141 agttaagcga tggagcgata gtaatttagc ggaaaataat caattatatt cattagatgc
     4201 acaacgatta tcgcaaagta gtttgtttaa tcgcaaagtt aagcaaattg tagttaaagc
     4261 gcagcgtatc tcggaagaac aaggggttaa agctcgtgaa atggctaatg aatttgaaaa
     4321 aagcattagt atacagcgag atcttgtata cgaggaacgt aatcgagttt tagaaataga
     4381 tgatgctgag aatcgagatt ttaaagcgtt agctaaagat gtgtttgaaa tgtttgtaaa
     4441 tgaggaaaag gtgctaacaa aatcgcgtgt tgtcgagtat atttatcaaa atttaagttt
     4501 ccaatttaat aaagatgtgg cttgtgttaa ttttaaagat aagcaagcag tagtgacatt
     4561 tttattagag caatttgaaa agcaattagc tttgaatcgt aaaaacatgc aaagtgcata
     4621 ttattataat attttcgttc aaaaagtctt tttgaaagca attgattcat gttggttaga
     4681 acaagtcgac tatttacaac aattaaaagc aagcgttaat caacgacaaa atgggcaacg
     4741 taacgctatt tttgaatacc atagagttgc cttagattca tttgaagtta tgacacgaaa
     4801 tatcaaaaaa agaatggtga aaaatatttg tcaaagcatg attacatttg ataaagaggg
     4861 tatgccagtt atacattttc cataaatgaa aaggggtagc gcatgacaat atataatata
     4921 aactttggta taggctgggc gagtagcggt gttgaatatg cacaagctta ccgtgctaaa
     4981 ttattgagac gtacaaatca agacactaaa tttgtgtttt tagattttat acagtcagag
     5041 aacatacaga cattaacgca aaacattggg tttaaagatc aagaagttat ttggttgtat
     5101 cagtatttta gtgatatttc tatagcacca acaacgtaca cgttagatga cgttgaacgt
     5161 gagcttggtc atgacattag ttttagagaa agaaatggta agatagtccg tctatatttt
     5221 aatgggaaat catcatttgt aacatgttat ctacaaaatg aacaaaaaga tgttgtggat
     5281 cgtgcagaat ttgtaattaa tagtatgtta gtacgtaaag atttttatag ttatacgcgt
     5341 atattttctg agtattatgc accagctgat aataaagcga aattatatat gcgacaattc
     5401 tataatgaag atggttccat cgcttataac gaatatattg atggagacag ctctatatat
     5461 gtgtttgaag atgcggtgtt gtataacaaa accgaattta ttgcatactt tttacaacga
     5521 ttgaatttaa cccgagacga tattgtcata ttagaccgcg cttctgatat tggtcaggct
     5581 gttttgcagc ataaaggtga tagtaaagtt ggtgttgtga ttcatgctga tcattatagt
     5641 aataatatga tgagtgagca gcatatacta tggaacaatt attatgaata tcaattttca
     5701 aaagctaaat acattgattt ctttattaca gcaacagata ttcaaaatca tatggtttgt
     5761 cgacaatttg agcaatatca aggttatcgc ccacgtgttt atactattcc tgtgggaagc
     5821 attgatgcat tatcatatcc aacattatca agaaagccat atgcgatgat tagtgcatct
     5881 cgtttagcaa atgagaaaca tattgattgg cttgtcaaag cggttatcgt ggctaaacga
     5941 caagtgccag aattaacatt tgatatttat ggagaaggta gcgagaagac gcgactgcgt
     6001 aaaattattg atacacaccg cgcacaagat tatattcgtt tactagggca tgttaaactt
     6061 gatgaaattt ataatgatta tgagttattt ctttctgcat caactagcga aggttttggg
     6121 ttaacactaa tggaagcggt aggctcagga ctaggtatga ttggattaaa tgtgaattat
     6181 ggtaacccaa cctttattcg agatggggaa aatggctact tggtaccttt tgataccgat
     6241 gaagatagtg tggatgatgt tgtcgcaaaa ctagctcatg ccattgtaat gtattttaac
     6301 aatggtcccc agacaccaca tgacatctct tatgaagtgg cacagcaatt tatgactcaa
     6361 gatattattt taaaatggga aacattagtt caagaggtgc tgcatgatta aattatttga
     6421 ttactttaac gatcattcac gaaagttata tgagtctttt aaagccagta agttggaaga
     6481 agatttaaca attgtactca atgacaatgg ctttttaccg gacgatgtta tatcaccgta
     6541 tcaatttttt gcagataatc ataatacaga aaatatgaaa ccacgatttt ttaatcaggt
     6601 tactgtacca gctttttggg aaattaaagg taacaacaat tcggctacaa ttaatgatat
     6661 gggacgtcta cgaggtaaaa tattttatca aagtggagag cgccctagaa ttgttagtcg
     6721 tgtcgaatgg tttgatgacc aacaacgtgt ccgatttgtc gattattatt ctaagaatgg
     6781 tattaaattt gcacaaactg tttacgattt aaatcgtaaa gcgatcttga agaaatatat
     6841 gacagcagaa ggtaaagaag tgatttatga aaattttgta acatctgatg tcatattgga
     6901 ttggcaaggg aagtcttact ttttcccttc aaagctcgca ttcgtattat tttttatcaa
     6961 gcaacttgaa attacggaac atcatttcgt tattaactca ctagccctac cattttcagt
     7021 gttatataat ttgccatcaa atggtagtga tgttttggta tggcaagaac agtgcgatgg
     7081 taatgtccca ggaaatatgc aattgatgtg taaaggtgat atgaaacgac attgtaatat
     7141 tattattcca gataaaaacg aatatgaaac gatgctcaat atagcagacg caaaggttca
     7201 atctcgtatt ttacaaggcg gatatctata taactatcgt agtcgtaata gatatactaa
     7261 agaaattgta atattaacta actcggatca acttcgtaac atcaaggtat tggttgaaac
     7321 tttaccagat tttaaatttc acatcgctgc tattacagag atgtctgata agctaatgca
     7381 acttgatcaa tatgctaatg tgcacttata cccatctatt aatatagaca gggtaaatga
     7441 actataccag ttatgtgata tttatcttga tatcaatgag ggtaatgaaa ttttaaatgc
     7501 ggtggaacaa gcgtttgact atgagttgtt gattttaggt tatcgtcaaa cagcacacca
     7561 tgctaaagta acactatcag agcacttatt tgagcataat gatgagataa caatggagag
     7621 taaagaccaa ttaatacaaa tgttagagag tttgaaagat cagcaacagt ttcgagatgc
     7681 tttattagca caaaaagcac atgcacacga aatctcgcgt gaacaattcg agcaagtttt
     7741 taaacaggcg ctcgaaagct aaaaagaaaa agcagtctaa aataaagtac catttaatat
     7801 aaaagatttg acgtaatatg atgttagcga catggacaat atgatattac gtcatgcttg
     7861 ttttgtttac ttaaatataa gctaagtaat aagtaaataa ttactaacaa caataactag
     7921 atagataagt gtaaatttct tgtaaacagg tatataatag tatgtaattc ttttaaggaa
     7981 gtaagtgaga aaggagtatg ttggtggcta aatatcgagg gaaaccgttt caattatatg
     8041 taaagttatc gtgttcgaca atgatggcga caagtatcat tttaacgaat atcttgccgt
     8101 acgatgccca agctgcatct gaaaaggata ctgaaatttc aaaagagata ttatctaagc
     8161 aagatttatt agacaaagtt gacaaagcaa atcgtcaaat tgagcaatta aaacagttat
     8221 cggcttcatc taaagcacat tataaagcac aactaaatga agcgaaaaca gcatcgcaaa
     8281 tagatgaaat cattaaacga gctaatgagt tggatagcaa agacaataaa ggttctcaaa
     8341 ttgaaatgaa cggtcaaagt gatatagaca gtaaattaga tcaattgctt aaagatttaa
     8401 ataaggtttc ttcaaaggtt gataggggtc aacaaagtgg caaggacgat cttaatgcaa
     8461 tgaaaaatga tatgtcacaa acggctacaa caaaatatgg agaaaaagat aatgaaaatg
     8521 atgaagcaat ggtagataag gcgttagaag acttagacca tttgaatcag caaatacaca
     8581 aatcgaaaga tgcatcgaaa gatacatcgg aagatccagc agtgtctaca acagataata
     8641 atcatgaagt agctaaaacg ccaaataatg atggttctgg acatgttgtg ttaaataaat
     8701 ttctttcaaa tgaagagaat caaagccata gtaatcgact cactgataaa ttacaaggaa
     8761 gcgataaaat taatcatgct atgattgaaa aattggctaa aagtaatgcc tcaacgcaac
     8821 attacacata tcataaactg aatacgttac aatctttaga tcaacgtatt gcaaatacgc
     8881 aacttcctaa aaatcaaaaa tcagacttaa tgagcgaagt aaataagacg aaagagcgta
     8941 taaaaagtca acgaaatatt attttggaag aacttgcacg tactgatgat aaaaagtatg
     9001 ctacacaaag cattttagaa agtatattta ataaagacga ggcagataaa attctaaaag
     9061 atatacgtgt tgatggtaaa acggatcaac aaattgcaga tcaaattact cgtcatattg
     9121 atcaactatc tctgacaacg agtgatgatt tattaacgtc attgattgat caatcacaag
     9181 ataagtcgct attgatttct caaattttac aaacgaaatt aggaaaagct gaagcagata
     9241 aattggctaa agattggacg aataaaggat tatcaaatcg ccaaatcgtt aaccaattga
     9301 agaaacattt tgcatcaact ggcgacacgt cttcagatga tatattaaaa gcaattttga
     9361 ataatgcgaa agataaaaaa caagcaattg aaacgatttt agcaacacgt atagaaagac
     9421 aaaaggcaaa attactggca gatttaatta ctaaaataga aacagatcaa aataaaattt
     9481 ttaatttagt taaatcggca ttgaatggta aagcggatga tttattgaat ttacaaaaga
     9541 gactcaatca aacgaaaaaa gatatagact atgttttatc accaatagta aatcgtccaa
     9601 gtttactaga tcgattgaat aaaaatggga aaacgacaga tttaaataag ttagcaaatt
     9661 taatgaatca aggatcaaat ttattagaca gtattccaga tatacccaca ccaaagccag
     9721 aaaagacgtt aacacttggt aaaggtaatg gattgttaag tggattatta aatgctgatg
     9781 gtaatgtatc tttgcctaaa gcgggggaaa cgataaaaga acattggttg ccgatatctg
     9841 taattgttgg tgcaatgggt gtactaatga tttggttatc acgacgcaat aagttgaaaa
     9901 ataaagcata attatattgg gggaagagca tctatatatt ttttaagtat ataagacgtc
     9961 ttatttctcc ttaatttatt gtgaagtata tgcaaaatgc aatgaataga ttgtccatca
    10021 ttttaacgtt ataatgaatt taacgactta gaactacaca agtaaaggag aatgaagatg
    10081 tctcgaaaaa cggcgctatt agttttggat atgcaagaag gtatagcgag tagtgtacct
    10141 agaataaaaa atattattaa agcgaatcag agagcaattg aagcagcaag acaacatcga
    10201 ataccagtca ttttcatacg tttagtgtta gataagcatt ttaatgatgt ctcctcgagt
    10261 aataaagtgt tttcaacaat taaagctcaa ggatatgcga ttactgaagc agatgcatct
    10321 acacgaatac ttgaagattt agcaccacta gaagatgagc cgattatttc taagcgacgc
    10381 tttagcgcat ttacaggtag ttacttggaa gtttatttac gtgcaaatga tattaatcat
    10441 ttagtattaa cgggtgtctc tacaagtgga gctgtattga gcacggcatt agaaagtgta
    10501 gataaagact attatattac tgttttagaa gatgctgttg gtgatagatc agatgataaa
    10561 catgacttta ttattgaaca aattttatca cgctcatgtg acattgaatc cgtagagtca
    10621 tggaaaagta gtttataatt aatataacgt caattaaagc tcggcagtaa tgtttgagaa
    10681 taagtacatt tgctcatatt tataaaatgt gtgagatgac aattgaaacg tatatgatga
    10741 ggaacatttg aacataaaat aatatattta tataaaacga cccgaggcgt tcgaactgaa
    10801 tgcctcgggt ttaattgaat aagaaatcgg acttatgaac agaaatatgt ttaagtccga
    10861 actccttgtt tatacttata aattttacgg gtttaatata atacttattt acctgtaata
    10921 tatgataatt cttcagcggc agctgcattg atagttctat gagaaatgat acctaatcct
    10981 ttaacattgg attctgaaat aacgatagaa ccatcactgt taactttttc aacaaatgct
    11041 acatgaccgt aatgttgatc tgcaccaaat tgtccagcct caaatacaac agcagcatga
    11101 cgttttggtg tatgacttac ttgataatca cggtattgag ctcgattatt ccaattatgt
    11161 gcatcaccta aatcacctga gatagatgta ccaaattgtt tcatacggtt atatacgtac
    11221 caagtacatt ggccatgtgg atatggcata ctatcagata cctcacggaa aggtttgaat
    11281 tcatctgatg aatcatcata atccttgata gaacgttcat atttatctaa atctggcatg
    11341 cgttcatcgt caaactgagt taattgatag tgtttaataa tactgtttaa tttcttagca
    11401 tagtttggat ctgtagcata tgttttagat aagtgtgatg ttgcatcttt ataagaatcg
    11461 gcttccgatt tccatgttgg tttataaatt gttcgattgc catcaatacc atttttaata
    11521 aggtcagagt aatcttttag tgattctttc gtgcttggat attttcggaa tccagcatta
    11581 atactataca attgattacc atcagcttct aatgtgttaa aaggaacaga attcccttca
    11641 aaagcacctt tgataccgaa taaattatgg tttggtgact tagctaaagc actacgacct
    11701 gagtcagatt ctaagattgc ttgggcaatc atgacagacg cataaatatc gttatcttga
    11761 ccaatgcgat gtgcatcttt agcaattgat ttgacaaatt gacgtgtatc ttttgagtca
    11821 acaacgttaa attgtccact atcatcattg ttagatatac taggatctgt ttcgaataat
    11881 gatgttgcac gtgtatcctt ttgattaata tcgttattga atgattgagc aggtttagat
    11941 ttatgtttca attcatcttg tgttggtaac tgtggattct ttgtattaga tttttcattt
    12001 ttgtcttttt tagattgaga tgcgtaatct ttttgtgttt tctttgcatc ttcactgtat
    12061 tgatccaaaa tagagtctaa agccgaatct gacattgact gattatcttt cgatgaagat
    12121 ttttgatttg ctctatcgtc acttgctggt tgactatttg attgattagg ttgtgttggc
    12181 tttggcgaat ttggttgctt attagatgta cttggttttg tattgtttga tttaggtgct
    12241 ttttgattgt ctgctttatc ttgtttagat gattgcgtat ccgtgtcatt tttgatgcta
    12301 ttgtcactgt ttttattcga atcatttgtt gacttttcgc cattacgagg ttgttcgtaa
    12361 tcagaaatat ccgaatttaa attgaataag ttttggatta aagttgttaa tgagtaatta
    12421 tcatcgtatt tatttttggt tagcaattgg tttatattgg tttgtggtaa attcttataa
    12481 ataaaatcaa tgatattgtt agagcctgaa gtgctgtcgt ctatagtttt aaattttttg
    12541 tcgttattgt cttggctact tgtattattg ttgtctgctt tatcagtatc tttacttgta
    12601 gtatccttag aagtttcatc atcattagat ttttttgaat catgagatgt tgtcttagct
    12661 gtagtatctt tttgaggtgt atcagcataa gcggtaggtg aaactaaagt aggtaatacg
    12721 agcgtagttg atagcaaata aattaaaatt ttatttttag gcatatttcg tattctccct
    12781 tgaaaaatat aataattaag tgtgataata aactatgatt tgttataatt tatcgtatgc
    12841 tgaaaatagt tgataggtat caatcgacta aatatcttcc agtaaattga ttatactaat
    12901 tcacaacgca aaaataaatt aatttacaaa aaatatataa aaaatatgaa taattcctac
    12961 ataggagtgt gacaatgaag aacgcattta aattatttaa aatggatctg aagaaagtag
    13021 ctaagacgcc agctgtgtgg attatcttag caggcttagc tattttgcca tcgttctacg
    13081 cttggtttaa cttatgggca atgtgggatc catatggcaa cacgggacac atcaaggtcg
    13141 cagtcgttaa tgaagataaa ggcgacacaa tcagagggaa aaaagttaat gtcggtaata
    13201 cgatggttaa tacactcaag aaaaataaaa gttttgattg gcagtttgta agtagagaga
    13261 aagctgatca tgagataaaa atgggtaaat attttgcagg tatttacatc ccatctaagt
    13321 ttacacatga aattaccggg acactacgta agcagcctca aaaagcagat gtagaattta
    13381 aggtgaatca gaagattaac gctgttgcgt ctaagctaac agatactggt tcgtcagttg
    13441 tcgttgaaaa agcgaatgaa caatttaata aaacagtaac tcgagcatta ttagaagaag
    13501 ctaacaaagc aggtttaact attgaagaaa atgtgccgac aattaataag ataaaaaatg
    13561 cggtatattc agcagataaa gctttaccta agattaatga ctttgcgaat aaaattgtat
    13621 atttgaataa ccaccaagcg gatttagata aatatgccaa tgattttaga aaactaggaa
    13681 attataaagg cgatatttta gatgctcaga aaaaattaaa cgaagtcaat ggtgctattc
    13741 cgcaacttaa tgaaaaggct aagttgatat tagctttaaa taattatatg ccgaaaattg
    13801 aaaaagcgtt aaattttgca gctgatgacg tgccagcgca gttccctaaa attaatcaag
    13861 gacttaacat tgcgagtcaa ggtattgatc aagctaatgg acagttaaat gatgccaaag
    13921 acttcgtcac acaagttaga agtagagtcg gtgattatca agatgcaatt cgacgcgcgc
    13981 aagatttaaa tcgaagaaac cagcaacaga ttcctcaaaa tagcgcggcg aacaacgaaa
    14041 catcaaatag tgcacctgca gctggtaatg gtgtagcatc aacgccacca agtgtaccaa
    14101 gtggcgatac tgcaccaaat aataatgtta cgcaaaatac cgcaccaaat ggtaataatg
    14161 cgcctgtatc gactacacca caaagtacaa gcgggaaaaa agatggtcaa agttttgcag
    14221 atataacaac aacacaagtc agcacagcta acgagaacac acaaaacatt acagataaag
    14281 atgttaaatc aatggaagcg gcattaacgg gctctttatt atcattatca aataatttag
    14341 atacccaagc gaaagccgca caaaaagata gtcaggcatt acgtaatatt tcgtatggca
    14401 ttttagcatc ggacaagcct tctgatttta gagagtcttt agataatgtt aagtccggtt
    14461 tagaatacac aacgcaatat aatcaacaat ttatcgatac attaaaagag attgagaaga
    14521 atgaaaatgt tgatttatca aaagaaattg ataaggtaaa ggcagctaat aatcgaatta
    14581 atgaatcatt aaggttagtt aatcaattaa gcaatgcatt aaagaatggt agttcaggaa
    14641 ctgctgaagc tactaaatta ctagatcaac tttcaaaact agattcatca ttatcatcat
    14701 ttagagatta tgttaaaaaa gatcttaaca gctctttagt atcagtatca caacgtatta
    14761 tggatgaatt gaacaaaggg caaactgcat tatccaatgt tcagtctaaa ttaaatacaa
    14821 ttgatcaagt cattaatagt ggacaagcta ttttaaaaaa tggtaaaaca cgtattgatc
    14881 gcttacaaac agtattacca agtattgaac aacaatacat tagtgctgtt aaaaatgctc
    14941 aagcaaactt cccgaaagtg aaaagtgatg tagctaaagc tgctaacttt gtgcgcaatg
    15001 acttaccaca gttggaacag cgattaacta atgcgacagc aagtgtgaat aaaaatttac
    15061 caacgttatt aaatggttat gatcaagcag taggattact aaataaaaat cagccacaag
    15121 cgaaaaaggc tttatcagat ttagctgatt tttctcaaaa taaattgcct gatgttgaaa
    15181 aagatttgaa aaaagcgaat aagattttca agaagttaga caaagacgat gcagtcgaca
    15241 aattaatcga cacacttaag aatgatttaa aaaaacaagc gggtattatt gcaaatccta
    15301 ttaataagaa gactgttgat gttttcccag ttaaggatta tggttcaggt atgacaccat
    15361 tctatactgc actgtcagta tgggtaggtg cactcttgat ggtaagccta ttaactgttg
    15421 ataataaaca taagagctta gagccagtgt taacgacacg acaagtgttc ttaggtaagg
    15481 caggattctt tataatgctt ggtatgttgc aagcgctcat tgtatcggtt ggagatttgt
    15541 taatcctaaa agcaggggtt gagtcacctg tattattcgt acttataacg attttctgtt
    15601 cgattatttt caactcgatc gtatatacgt gcgtatcatt acttggtaac ccaggtaaag
    15661 ccattgcaat cgtattgctt gtattacaaa ttgcaggtgg tggaggaaca ttcccaattc
    15721 aaactacgcc acaatttttc caaaacattt cgccatactt accatttacg tatgcaattg
    15781 attcattacg tgaaacagta ggcggtattg ttccggaaat cttaattaca aaattaatta
    15841 tattaacgtt atttggcata ggattcttcg ttgtaggttt aattttaaaa cctgtaacag
    15901 atccattgat gaaacgcgta tctgaaaaag ttgaccaaag taacgttaca gaataaaaat
    15961 gaaatccaca cattagggtt atagctcctt aatgtgtgga tttttatgtt tttagacaga
    16021 agagatagta atttctgtct tttatgggac gggtgttatc attgctatta tccaggatga
    16081 cttactatag cactaatatt accgacaaag tgaatatcct cgtcttccgt agttaaaata
    16141 aagctagaac cttttgggat gtcatagtgc ttatcgttta ctgttaaagt accagtacca
    16201 tcgataattg taactaagca ataagcatgt ggtttattga attttaaatc tccatgaata
    16261 tcccatttat atactgcaaa atattgatta tctacaaatt gagttacagt gtgtgtgtcg
    16321 atgtgagttg ttataggagt agtatttggt tcatgattgc ctaattcaat cacatcttta
    16381 ctttgctcta agtgcaaatc acgcaattga ccattttgat ctcgtctatc atagtcataa
    16441 atacggtatg tcgtatcgga ggattgttgt gtctctaaaa ttaaaatacc cgaaccaatg
    16501 gcatggacag tgccagcagg aacataataa aagtcaccgg gcttaacagg tatacgtttg
    16561 aaaagactgt caaattcatg attatcaatc atgtctatta acgtctgttt attatgtgca
    16621 tgtacgccat atataatttc agcacctggg gctgcatcta aaatatacca acattctgtt
    16681 ttacctagtt cgccttcgtg ttttaaagcg taatcatcat ccgggtgaac ttgaacagat
    16741 aatttatcat tggcatctaa tactttagtt agcagaggga aactatctcg tgaatcatta
    16801 tcgaataatt cacgatgttg tgaccaaagt tgatctaggg tcatatcctt gtatggacca
    16861 ttgataattg tattaggacc atttggatgt gcagaaattg cccagcattc accagttgtt
    16921 tcattaggga tatcatagtt aaatgctttt aatgcatgac cgccccaaat tctgtcttta
    16981 aaaacgggtt gtaaaaataa tgccatagtt aaaactcctc tatattttca ttaataagtt
    17041 ataaatttct gtagtactgt ttgcattaat tagtgattgg cgtgtctcat cattcattaa
    17101 cgctttagat aagcgctgaa gtatttttaa atgtgtatcc tgactgttgt ttggtacggc
    17161 aattaagaat atcaattgag gtagactacc atctagactc tcccatttaa caccatgatt
    17221 atttttcata acagctacaa tcggttgttt tacaacatca gactttgcat gtggaatggc
    17281 cacgttcatg ccaatagctg tcgtagactc catttcacgt tctaggattg cattttttaa
    17341 atgcgatgtg tgctctacat aacggcaaat tttaagttta tgaatcaaca tatcaattgc
    17401 ttcgtttcga gacatgtcgt gatcagtaat tatcatagtt tgttgatcaa aaacatgaga
    17461 aggtttattg tgatgtgaat gtttcgcggt gttatctaca ttgtcaacct ctgtatcatg
    17521 ttgtgttata tctgtatcat gaagttgcgt gtgttgcgct ggtgcatcta ctgctataac
    17581 tggtgtattg cgttttaata atagtacagt agtcattgtg acaagactac ctactatcac
    17641 tgcaaagata aacaataata catgatcaat accacctaat acagccacga ttggacctcc
    17701 atgtgcgact ctatcgccga caccaccaat ggctgcaatg actgatgcaa tcattgcacc
    17761 aatgatgttt gcaggtataa tgcgcaatgg atcttgggct gcgaaaggaa tagcaccttc
    17821 agtaatacca aatagtccca tagtgaagga agccttaccc atttctcttt cggaatgatt
    17881 gaatttatac ttttgaacaa acgttgctaa acctaaaccg attggtggtg tacatacagc
    17941 aactgcgacc atacccataa cggcgtaatt accttcagca ataagtgctg agccaaataa
    18001 aaatgctact ttgtttactg gaccgcccat atcgaaggca atcatcgcac ctataatcat
    18061 cgcaagtata ataatattag caccttgcat actttttaac caggttgtta atgcctcaaa
    18121 aatattagaa attggtgcac cgattaaaaa tataaatatc aatcctacaa cgaccgatga
    18181 aataatggga ataataatga taggcataat tggtgccatt gcttttggaa ctttaatatc
    18241 tttaatccac tttgcgatat aacctgctaa gaaaccagca acaataccac ctaaaaatcc
    18301 tgcgcctgca tcactgccat aaaaactacc gtcagcagcg atagcgccgc caatcatacc
    18361 aggaacaaga ccgggcttgt cagcgatact aacagcgata tatccagcta gtattggaac
    18421 cataaattta aaggctaaac taccaatgtt ttcaatggat ttccaaaatg aatcatctgg
    18481 gatgactaat ccttttgatg tcgtttcacc gcctagagtc agcgcgatgg cgataaggag
    18541 tccaccaact acgataaaag gaaccataaa cgatacaccg ttcattaaat gttgatacac
    18601 catttgaata ccacttttag acttaccgcg atctttcgaa tgataatttg tttcagattg
    18661 ataaataggc gcatcttgat taatgatacg ttgaattaga cctctcggat tatgaatccc
    18721 ttcgcgaaca ttttcattaa tcaaccgttt accaacaaat cgggacagat caacttgttt
    18781 atcagctgca attatgacac catcagcttc ttcgatgtct tgcgtagtta aaacattttc
    18841 agcaccaaca ccgccttgtg tctctacttt aatatccaca cccatttctt ttgctacctg
    18901 ctcaagcttt tcttgagcca tatatgtatg tgcaatgcca tttgggcatg aggtaatagc
    18961 tacaattttc ataaaatcat ctccttttct atattgtaag cgcattctcg atactaaaaa
    19021 aaagaataat taccgttact agtggcaatt attcttgtaa gtattcaaat aactgttgct
    19081 ttaaactatg atcatctaaa ttacataaat ggttcactga atcatcatcc aagttagcaa
    19141 ttaattgcat catttgtttt gtaaaagctg tgtctttttg tgaaattgct aagaaaaaga
    19201 caagtttgac atcgtgttgt cgccaaggaa aaacatcttt tgtgcgaaaa ataagcacat
    19261 gtgattgtaa aactttttca ggatcaccat gaggaatcgc cataaaatta cctatgtatg
    19321 tagaagatga tttctcacgc tctaaagctg attcgatata tccttctaca atcgcatgat
    19381 gtgcttgtaa tattttttga gcttcttcaa aaatttgcac agtatgtcgt ggtttttgtt
    19441 cagtatttac gacaaggaaa ttgacagtgt ccatatgatg atgtgcttga accggatttt
    19501 gcttttgctt cacaatatgt ctgattttgt gacggtcatc ctcagaaaat aatggtgcaa
    19561 ccttgatagt tgaaaggtgc ttaggaagta tgtttagcgt ttgttttgga atatcatggg
    19621 tcgttattaa taaatctaca ttgtcaaagt gatagtgtgt tatattttct agtttaatcg
    19681 tatttatcac taacaactct tcggataagt tatttatttt agtttctaaa aaattcgaca
    19741 cacctagacc ataataacaa gcaatgacta catttaattg tgttttggta cgacgctcga
    19801 tggcagcttg aaaatgaata gttaaaaaag caatttcatc ttcactcatc tcaatatctg
    19861 tatcaactgc taatttatca atcgcttcaa aaagtgtgtt aaacacaaag ggatagagtt
    19921 ttttaatctc tataactaaa ggattgttta aataaatgtt ttgagtgata cgtaaatatg
    19981 ctttactaaa atgattatat aaattttgtt gtaaaatcga atcttcattg aaaggtacat
    20041 gaatacgttg ctgcatcaat tcgattaagc gatcaatata actttgtata aatatacgtt
    20101 ctatgccaat atcgagttta ttaaaatgat aagcaataaa gaatgaaaac atattgatta
    20161 cttgttcgtt caagtcataa cctaatcttt cgttgatttg cttaatgcaa gattgagata
    20221 tcaattttgc atcgtggttt aacgtgtcta gctcacttaa agattgctta cgtttaatga
    20281 ttaaaatgag atgaattaaa agctgttgta tttgaatatc agttgtttca atactatgtt
    20341 gttgaagtgt ctcttgtata atatgcgaaa tcatcctttg gtgtgaatca ggtaattcat
    20401 ttaaaattag gtcttcaaca tgtacatgcc ctgatgataa ttgatttaaa tggatgatgg
    20461 cattagtgat atcattatct gttccatcga ccacaatacc ttgttttttc ttaattgtta
    20521 aagcgatatt aaatttttga caccattgtt gaatacgaat gaaatagtcg ttgagcacag
    20581 ttttagataa tagataatct tgctctagtt gttgcaatgt ctgcgattta ttgtgcatta
    20641 gcagttgata cgccatagat aataatagtt tttctttata tgattgaata tgcgtgtaac
    20701 gttcagttat cgtttctaag gtatactgcg atgtatttaa ttgatatcct ttagatttaa
    20761 tacttacgat gatatcatcc ataaaattgc tattgataac atggatatca ttgcgaactg
    20821 tgcggtttga aacattgaca tgttcagcaa tttcattaga actaatgtgc tttgatggat
    20881 ttttaataaa aaactggagt agttttaagt gtctatcaag catttaacat gtacctcctt
    20941 tctaaatttt ccgtgtaagc gtttttaaag gtgtattaat tttattaaac atgagagctt
    21001 atacatacgt caatgacatt aaagcgaact tttatatgaa tttaacagag tgcgaattat
    21061 gcaaataaag aacagcagta agatatttca aatagaaaaa tatcttactg ctgtttttct
    21121 gaatttatgt acctgatact tgtggacgta tcaggtaaat gattaatttt taggtgattg
    21181 tacttgaggt gtttgtttag aaggagtatt ggtattattt gatttattag caggtggtgt
    21241 gttctgttgt ttatgatttt ggttattcgt tgaaggttga ctgctaccgc cgtgatttga
    21301 atttgattga ttcggattag attgatttga atttgattga ttcggattag atggttgtgt
    21361 attcgctggt gctgttgaac cgttattttg gacagttgat ggcgtagatg attgattgcc
    21421 attagtaaca ccgttgttgt tttgattttc atttgtgttg tttgtatttt cgtctttttg
    21481 atgatttact tcagtatctt tcttttgatg ggtagcttta ttatcttgct cattattatg
    21541 atttgacgat gtagaatgat ttattgcagc ataaatggcg aatccaagtg caccaattaa
    21601 caagatgata acaacagtaa taagaaattt tttcaaatgt aacgcctccg tttataataa
    21661 aaatagtcat acattgcatg gcatcatgct ttcaatgtcg acaaaatgat gttaactata
    21721 aaacttgaaa tgcggacgat attaatgttt gtgttagttt ttatgtactt c
//
LOCUS       DAKPJH010000037        21636 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.037, whole genome shotgun sequence.
ACCESSION   DAKPJH010000037 DAKPJH010000000
VERSION     DAKPJH010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21636
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.037"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..489
                     /locus_tag="OY092_001177"
     CDS             <1..489
                     /locus_tag="OY092_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001039417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cna B-type domain-containing protein"
                     /protein_id="HCX1076129.1"
                     /translation="KVELYQDGKATGKTATLNESNNWTHTWAGLDEKAKGQQVKYTVE
                     ELTKVKGYTTHVDNNDIGNLIVTNKYTPEKPNKPIYPEKPKDKTPPTKPDHSNKVKPT
                     PPDKPSKVDKADQSKDNKTKPENPLKELPKTGMKIITSWITWVFIGILGLYLILRKRF
                     NS"
     gene            complement(650..1081)
                     /gene="bstA"
                     /locus_tag="OY092_001178"
     CDS             complement(650..1081)
                     /gene="bstA"
                     /locus_tag="OY092_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol transferase BstA"
                     /protein_id="HCX1076130.1"
                     /translation="MGLGYLVNVYDAWKVEKVLDDYHKPFSNTIHWQFGHVLTIFESA
                     LAVAGKENIDLNIYRPLFGNGSSPDEWKDEVPSIERILEGLQTLPERARNLTEDDLAI
                     ELKQPIVGCNNLEELLVLNAIHIPLHAGKIEEMSRILKNLK"
     gene            complement(1166..1804)
                     /gene="pcp"
                     /locus_tag="OY092_001179"
     CDS             complement(1166..1804)
                     /gene="pcp"
                     /locus_tag="OY092_001179"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HCX1076131.1"
                     /translation="MHILVTGFAPFDNQDINPSWEAVTQLENIIGTHTIDKLKLPTSF
                     KKVDTIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARISDNDDFQPIDQAI
                     HLDGAPAYFSNLPVKAMTQSIINQGLPGALSNSAGTFVCNHVLYHLGYLQDKHYPHLR
                     FGFIHVPYVPEQVIGKPDTPSMPLEKIVAGLTAAIEAISNDEDLHLALGTTE"
     gene            complement(1956..2912)
                     /locus_tag="OY092_001180"
     CDS             complement(1956..2912)
                     /locus_tag="OY092_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HCX1076132.1"
                     /translation="MNYQVLLYYKYTTIDDPEQFAQDHLAFCKAHHLKGRILVSTEGI
                     NGTLSGTKEETEQYMAHMHADERFKDMVFKIDEAEGHAFKKMHVRPRKEIVALDLEDD
                     VDPRHTTGQYLSPVEFRKALEDDDTVIIDARNDYEFDLGHFRGAIRPNITRFRDLPDW
                     IKENKALFADKKVVTYCTGGIRCEKFSGWLLKEGFEDVAQLHGGIATYGKDPETKGEY
                     WDGKMYVFDDRISVDINQVEKTIIGKDWFDGKPCERYINCANPECNKQILVSEENEAK
                     YLGACSYDCAKHERNRYVQANNISDNEWQQRLTNFDDLHQHA"
     gene            3156..4127
                     /locus_tag="OY092_001181"
     CDS             3156..4127
                     /locus_tag="OY092_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HCX1076133.1"
                     /translation="MSQQDLPTLFYSGKSNSAVPIISESELQKITAEPWLEISKKGLQ
                     LEGLNFDRQGQLFLLDVFEGNIFKVNPETKEIKRPFISHKANPAAIKIHKDGRLFVCY
                     LGDFKSTGGIFTATENGDNIQDIIEDLSTTYCIDDMVFDSKGGFYFTDFRGYSTNPLG
                     GVYYVAPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP
                     FGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGH
                     MLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ"
     gene            complement(4605..5120)
                     /locus_tag="OY092_001182"
     CDS             complement(4605..5120)
                     /locus_tag="OY092_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HCX1076134.1"
                     /translation="MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFS
                     TLKATTTIIPSSINTKNEARDNHLKSGDFFGTDEFDKITFVTKSITENKVVGDLTIKG
                     ITNEETFDVEFNGVSKNPMDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVK
                     FEASAEFSISE"
     gene            5308..5415
                     /locus_tag="OY092_001183"
                     /pseudo
     CDS             5308..5415
                     /locus_tag="OY092_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501466.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
     gene            5533..6657
                     /locus_tag="OY092_001184"
     CDS             5533..6657
                     /locus_tag="OY092_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCX1076135.1"
                     /translation="MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKYVNPNEYAKHKSK
                     MDEHWETYHGQVYHVFYHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKN
                     NYIIVNPHDVYDLSSHHVKAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDK
                     NKHVVSETTDSKGHATYSDDNDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYR
                     TNELTSKDYTKNKKAVEEVVRAMKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDE
                     VEPIVGKTDMFVFPHGAQDRYTQAYDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRV
                     AIDGLNLFEFKYKLKPFFNPENVYSKQDRQFFKGNRDYEE"
     gene            6961..7779
                     /locus_tag="OY092_001185"
     CDS             6961..7779
                     /locus_tag="OY092_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HCX1076136.1"
                     /translation="MNNSEQLIALKESETAFLKYFNKADYELVDFSVVEKLDWKQLNH
                     EDLQQMGERNFWQHEHQIYALRNDFTDQLLRYYSMYPTAATKVAYTGLIIRNNEAAVQ
                     VGLENYAPSLANVQQSLKLFIQFIQQQLRDNVHFVVLGHYQLLDALLDKSLQTPDILS
                     MIEERNLSGLVTYLSTEHPIVQILKENTQQQLNVLEHYIPNDHPALVELKIWERWLHT
                     QGYKDIHLDITAQPPRSYYTGLFIQCHFAENESRVLTGGYYKGSIEGFGLGLTL"
     gene            7797..8411
                     /locus_tag="OY092_001186"
     CDS             7797..8411
                     /locus_tag="OY092_001186"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HCX1076137.1"
                     /translation="MLRIAIAKGRLMDSLINYLDAIEYTTLSETLKNRERQLLLSVDN
                     IECILVKGSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPET
                     TNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELACVVDMVDGIVDIVQTGTTLKA
                     NGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSLEVSIANA"
     gene            8404..9654
                     /locus_tag="OY092_001187"
     CDS             8404..9654
                     /locus_tag="OY092_001187"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HCX1076138.1"
                     /translation="MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYN
                     LTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESV
                     ECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVL
                     AACYITQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID
                     QIAGPTEIALIIDDTTDLDAIVYDVFAQAEHDELARTYVISEDAQVLKDLESRIAKAL
                     PNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVG
                     ALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIA
                     DSAQHIAHVEALYNHQQSILIRQS"
     gene            9670..10683
                     /locus_tag="OY092_001188"
     CDS             9670..10683
                     /locus_tag="OY092_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HCX1076139.1"
                     /translation="MIYIDKNESPVTPLDEKTMTSIISATPYNLYPDAAYEQFKEAYA
                     KFYGLSPEQIIAGNGSDELIQKLMLIMPEGPALTLNPDFFMYQAYAAQVNREIAFVDA
                     GSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKALNGYFVID
                     EAYLDYGTAYDVELAPHILRMHTLSKAFGIAGLRLGVLISTAGTIKHIQKIEHPYPLN
                     VFTLNIATYIFRHREETSRFLTMQRQLAEQLKQIFDTHVADKISVFPSNANFVLTKGS
                     AAQQLGQYVYEQGFKPRFYDEPVMKGYVRYSIATEPQLNQLEEIVKEWSAKYDLSKTT
                     KHS"
     gene            10652..11230
                     /gene="hisB"
                     /locus_tag="OY092_001189"
     CDS             10652..11230
                     /gene="hisB"
                     /locus_tag="OY092_001189"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HCX1076140.1"
                     /translation="MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFH
                     SGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGAMYIPMDETLAR
                     VVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHE
                     IEAIFKAFSRSLGIALTATDDQRVPSSKGVIE"
     gene            11227..11805
                     /gene="hisH"
                     /locus_tag="OY092_001190"
     CDS             11227..11805
                     /gene="hisH"
                     /locus_tag="OY092_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HCX1076141.1"
                     /translation="MIVIVDYGLGNISNVKRAIEHLGYEVVVSNNQNIIDQAETIILP
                     GVGHFKDAMSEIKRLNLDAILAKNTDKKMIGICLGMQLMYEYSDEGDASGLGFIPGNI
                     SRIQTEYPVPHLGWNNLVSKHPMLNQDVYFVHSYQAPMSENVIAYAQYGTDIPAIVQF
                     NNYIGIQFHPEKSGTYGLQILRQAIQGGFIND"
     gene            11798..12502
                     /locus_tag="OY092_001191"
     CDS             11798..12502
                     /locus_tag="OY092_001191"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-((5-
                     phosphoribosylamino)methylideneamino)imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HCX1076142.1"
                     /translation="MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSRFE
                     CVNRIHIVDLIGAKAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYC
                     IVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRRLSDI
                     PLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAA
                     IIGKAAHQASFWEGLK"
     gene            12499..13257
                     /gene="hisF"
                     /locus_tag="OY092_001192"
     CDS             12499..13257
                     /gene="hisF"
                     /locus_tag="OY092_001192"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HCX1076143.1"
                     /translation="MIKKRIIPCLDVKDGRVVKGIQFKGLRDIGNPVDLAMYYNEAGA
                     DELVFLDISKTEEGHSLMLEVIEQTASRLFIPLTVGGGIQSLDDITQLLNHGADKVSL
                     NSSALKNPQLIKQASDKFGRQCICIAIDSYYDPERKAHYCCTHGSKKMTNIKVYDWVQ
                     QVEQLGAGELLVTSMGHDGMKQGFDIEHLAKIKSLVNIPIIASGGGGNAQHFVELFDQ
                     TDVSAGLAASILHDRETTVQSIKEVIRQGGIAVR"
     gene            13254..13886
                     /locus_tag="OY092_001193"
     CDS             13254..13886
                     /locus_tag="OY092_001193"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000170495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HCX1076144.1"
                     /translation="MTNYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGV
                     VCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTE
                     VPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKA
                     FVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW"
     gene            14072..14251
                     /locus_tag="OY092_001194"
     CDS             14072..14251
                     /locus_tag="OY092_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000837587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076145.1"
                     /translation="MKSKLSNSGIDVTVKDVEKYMNRYNEVMKGKNGEKAKKLYLSLL
                     PINIIVVFIFFVFIL"
     gene            14972..17014
                     /gene="lip1"
                     /locus_tag="OY092_001195"
     CDS             14972..17014
                     /gene="lip1"
                     /locus_tag="OY092_001195"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip1"
                     /protein_id="HCX1076146.1"
                     /translation="MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNS
                     QEDTVTAQSIGDQQTRENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLN
                     KDQLKDDKKSSRNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEAD
                     NSQDSNANNNLPSQSRTKEAPSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNY
                     NFNNEQEVKPQKDEKTLSVSDLKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGT
                     KELTAKAKDDQTNKVAKQGQYKNQDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQ
                     DLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGI
                     YKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGSREEIEYQKKHGGEISPLFKGNNDNM
                     ISSITTLGTPHNGTHASDLAGNEALVRQIVFDIGKMFGNKNSRVDFGLAQWGLKQKPN
                     ESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTGEATHKAL
                     NSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTNATDKIQ
                     KGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKVTDTKQA"
     gene            complement(17405..18457)
                     /gene="icaC"
                     /locus_tag="OY092_001196"
     CDS             complement(17405..18457)
                     /gene="icaC"
                     /locus_tag="OY092_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide intercellular adhesin
                     biosynthesis/export protein IcaC"
                     /protein_id="HCX1076147.1"
                     /translation="MKKIRLELVYLRAIICAIIIVTHLLTQITLKHENMEGGSLVLQF
                     YIRNIVIFGTPCFIILSQLLTTLNYQKVTYRYLTTRVKYILIPYILMGLFYSYSESLL
                     TDSSFNKQFIENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFILQQ
                     SFLYYFTNNTAFHDTVLHYYPLSENTIIFGWIFYFFLGAYMGYNYERVLNFLERYLVI
                     MIVLAVATYFVFIALANGDYWNVTSFSYSLTPYNSIMFIVILGICTHFKTMLFNTIQM
                     ISAFSFFIYLLHPIILDSLFAYTNIFEDNTMVFLAISLLFILGLCIGVGMILREFYIF
                     RFIIGKQPYKLNINAY"
     gene            complement(18444..19316)
                     /gene="icaB"
                     /locus_tag="OY092_001197"
     CDS             complement(18444..19316)
                     /gene="icaB"
                     /locus_tag="OY092_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intercellular adhesin biosynthesis
                     polysaccharide N-deacetylase"
                     /protein_id="HCX1076148.1"
                     /translation="MKYRKLIILVLSILIILPVSTLDGHHIANADDDSPKKLKYKENS
                     ALALNYHRVRKANFLNNFIYFFSSSKEIKNYSVSQSQFESQIKWLKSHDAKFLTLKEF
                     LYYKKKGKFPKRSVWINFDDMDETIYENAYPILKKYKIPATGFIITGHVGEENFHNLD
                     MISKKELKEMYKTGLWEFETHTHDLHNLSKNNKSKLMKSSEATIIKDLNKSEKYLTKN
                     FKKSQKTIAYPYGLMNDDKLPVIKKAGLKYGFSLEEKAVTPNSNDYYIPRILISDDAF
                     EHLIKRWDGFHEKD"
     gene            complement(19313..19618)
                     /gene="icaD"
                     /locus_tag="OY092_001198"
     CDS             complement(19313..19618)
                     /gene="icaD"
                     /locus_tag="OY092_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular adhesion protein D"
                     /protein_id="HCX1076149.1"
                     /translation="MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIG
                     TIFEIHDESINTIRVALNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES"
     gene            complement(19582..20820)
                     /gene="pgaC"
                     /locus_tag="OY092_001199"
     CDS             complement(19582..20820)
                     /gene="pgaC"
                     /locus_tag="OY092_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine synthase"
                     /protein_id="HCX1076150.1"
                     /translation="MQFFNFLLFYPVFMSIYWIVGSIYFYFTREIRYSLNKKPDINVD
                     ELEGITFLLACYNESETIEDTLSNVLALKYEKKEIIIINDGSSDNTAELIYKIKENND
                     FIFVDLQENRGKANALNQGIKQASYDYVMCLDADTIVDQDAPYYMIENFKHDPKLGAV
                     TGNPRIRNKSSILGKIQTIEYASLIGCIKRSQTLAGAVNTISGVFTLFKKSAVVDVGY
                     WDTDMITEDIAVSWKLHLRGYRIKYEPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL
                     RDFFSTMKTKRFPLYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMTYSFSIFL
                     LSSFTMTFINVIQFTVALFIDSRYEKKNMAGLIFVSWYPTVYWIINAAVVLVAFPKAL
                     KRKKGGYATWSSPDRGNTQR"
     gene            20985..21545
                     /gene="icaR"
                     /locus_tag="OY092_001200"
     CDS             20985..21545
                     /gene="icaR"
                     /locus_tag="OY092_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ica operon transcriptional regulator IcaR"
                     /protein_id="HCX1076151.1"
                     /translation="MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSK
                     KSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNT
                     PEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQ
                     KFGAVEESKSQFKDEVYSLLNIFLKK"
BASE COUNT         7820 a         3299 c         3794 g         6723 t
ORIGIN      
        1 aaagttgagt tatatcaaga tggaaaagca acaggaaaaa cggcaacatt aaatgaatct
       61 aataactgga cccatacgtg ggcaggatta gatgaaaaag caaaaggtca acaagtaaaa
      121 tacacagtcg aggaattaac aaaggtcaaa ggttatacaa cacatgtgga taacaatgat
      181 ataggtaact tgattgtaac gaataaatat acgccagaaa aaccgaataa accaatctat
      241 cctgaaaaac caaaagacaa aacaccacca actaaacctg atcattctaa taaagttaaa
      301 ccaactcccc cagataagcc atcaaaagtg gataaggctg atcaatctaa agataataaa
      361 accaaacctg aaaatcctct aaaagaatta ccaaaaactg gtatgaagat tataacttca
      421 tggattacat gggtatttat aggtatattg ggattgtatt taattttaag aaaaagattt
      481 aactcataaa ccattataat tatttttata gatatggcta ttcctagttc tatgtataat
      541 acatgatatt aataggtcac ttttaatctg tatgtaagca gactaaaagt ggccttttaa
      601 aaaataaaaa aatctgttaa cgtgttgtta acggttaata agcacatatt tattttaaat
      661 tttttaatat acgagacatc tcttcaattt taccagcatg aagtgggatg tgaatggcat
      721 ttaatactaa taactcttct aagttattac aaccgacaat tggctgtttc aattcaattg
      781 ctaaatcatc ttcagttaga tttcgtgcac gttcaggtaa agtttggaga ccttctaaaa
      841 tcctttcaat actcggtact tcatccttcc attcatctgg agacgaacca tttccgaata
      901 aaggtctata gatatttaaa tcaatattct ctttaccagc aacagctaag gccgattcaa
      961 aaattgttaa tacatgacca aattgccaat gaatggtatt agaaaaaggc ttatgataat
     1021 catcaagtac cttttcaact ttccaagcat catacacatt tactaaatat cctaacccca
     1081 taaataaaac atacttccgt aagtattacc ctattaacaa agttgttagt catttaagga
     1141 atgtatttta ttggtgtact tataactatt ccgttgtgcc cagggctagg tgtaaatcct
     1201 catcattaga aatagcttca atggctgcag tcaaacctgc aactatcttt tctaatggca
     1261 tagatggtgt atcgggttta ccaatgacct gctctggtac gtatggcaca tgaataaatc
     1321 cgaatcgtag gtgagggtaa tgcttatctt gtaaataacc taagtgataa agtacgtgat
     1381 tacatacgaa cgtacctgcg ctatttgaaa gtgctccagg aagtccttga ttaataatac
     1441 tttgagtcat tgctttaact ggtaaatttg aaaaataagc tggcgcaccg tctaaatgaa
     1501 tggcttgatc aataggttga aaatcatcat tatctgaaat acgtgcatca tcaatattaa
     1561 tggcgacacg ttctggggta atggcatttc taccaccagc ttgtcctata gctagtacaa
     1621 catcatagtg attagatgcc aacgttttat ttataatagt atctactttc ttaaaagagg
     1681 ttggtagttt taatttatcg atggtatgtg tgccaataat attctctagt tgagtcacag
     1741 cttcccaaga aggattaata tcttgattgt caaaaggcgc aaaccctgtt actaaaatgt
     1801 gcattttaag acaccccgca gtattaaaat ttaatttagt ataacatgcg cataattaaa
     1861 aacatatcag gttatgcatg cgcataaaaa acagccttga aaaaccttta taaatcggat
     1921 tttcaaagcg tgttttgaaa ggtattttat taaaactaag catgttgatg taaatcatca
     1981 aagtttgtta aacgttgttg ccactcatta tcactaatat tattcgcttg aacataacga
     2041 ttacgctcat gtttagcaca atcataagag catgcaccta aatatttagc ttcgttttct
     2101 tcggaaacta atatttgttt attacattct gggttagcgc aattaatata acgttcacat
     2161 ggtttgccat caaaccaatc cttaccaata attgtttttt caacttggtt gatatcaaca
     2221 ctgatacggt catcaaatac gtacatttta ccgtcccaat attcaccttt tgtttcagga
     2281 tctttaccat atgtagcaat accgccatga agttgagcta catcttcgaa accttctttt
     2341 aaaagccatc cagaaaattt ttcacatcga atgccaccag tacagtacgt aaccactttt
     2401 ttatctgcaa ataacgcttt attctcttta atccagtcag gcaaatctct aaagcgcgtg
     2461 atatttggac gaattgcacc tcggaaatga cccaaatcaa attcataatc attacgtgca
     2521 tcaataatga ctgtgtcatc atcttcaaga gcttttctaa attctacagg tgataaatat
     2581 tggccagttg tgtgtcttgg atcgacgtca tcttctaaat ctaaagcaac gatttctttt
     2641 cgaggacgta catgcatttt cttaaaagca tgtccttcag cttcatcaat tttaaacacc
     2701 atatctttga atcgttcatc ggcatgcata tgtgccatat attgttcggt ttcttctttt
     2761 gtaccagata atgtgccgtt aataccttct gtagaaacaa gaattctacc ttttaaatgg
     2821 tgtgctttac aaaaggctaa gtgatcctga gcaaactgtt cagggtcatc aatcgtcgta
     2881 tatttataat ataaaagaac ttgatagttc ataggttaat ctccttctaa aaacatgtta
     2941 taagcatgtt aatttttaaa ataaagcgtc aatacgcata tttgtctacg tccttcattt
     3001 taacagagtt gtattgtcat tcaatatttc tagcttgaaa tcagccacta gaccgataaa
     3061 atagataaac gaaaccgtta tcatttgatt taaatgtttc cttgtttaaa ataaaaatga
     3121 tagttaaaac gaatgaaatg aaaggaatga tcatgatgtc acaacaagat ttacctacat
     3181 tattttatag cgggaagtct aatagtgctg ttccaattat atctgaaagt gaattacaaa
     3241 aaattacagc tgaaccatgg cttgaaattt ccaaaaaagg attgcaatta gaaggattga
     3301 actttgatcg gcaaggacaa ctatttttat tggatgtatt cgaaggtaat attttcaaag
     3361 tcaatcctga aacgaaggaa atcaaacgac cttttataag tcacaaagcg aatcctgcag
     3421 caatcaaaat acataaagac ggccgattat tcgtttgtta tttaggagat tttaaatcta
     3481 caggagggat ttttacagct acagaaaatg gtgacaacat acaagatatt attgaagatc
     3541 tttcaacaac atattgtatt gatgacatgg tatttgattc taaaggtgga ttttatttta
     3601 cagattttag aggatactct accaatccac taggaggcgt ttattatgtt gcgccggact
     3661 ttagaacagt gacgcctatc attcaaaata ttagcgtagc aaatggtatt gctctaagta
     3721 cagatgaaaa agtactatgg gtaacagaaa ctacagccaa tcgattacat cgcattgcac
     3781 ttgaagatga tggtgtgacg atacaaccat ttggagctac tataccgtac tattttacag
     3841 gtcatgaagg accagactca tgttgtattg atagtgacga taatttatac gtagcaatgt
     3901 atggtcaagg tcgagtgtta gtttttaata aaaggggtta tccaatagga caaatattga
     3961 taccaggccg agatgaaggg catatgttac gttctactca tccgcaattt atacctggaa
     4021 caaatcaact catcatttgt tccaatgata tagaaatggg cggaggatct atgctttata
     4081 cagttaatgg ctttgcaaaa ggtcatcaaa gttttcagtt tcaataagac ctacctgaat
     4141 gaaaggcgtc ttaatataag tttaaatctt agcaattttt aatttagaag ttaaatataa
     4201 tttgcttcaa tttgtaaaat gaagttttgt ataacgtaaa taggcaatat ttaatataag
     4261 aaagtataaa gaagaatttt cttgattatt tctaatgaag ccaatgccaa tttaataagg
     4321 agttgtttat tttggctatt tatatttttt gtacaatact agttttagtc gcagttggag
     4381 cacttttgac aaatagaata agggataaaa aagataaaag gctagatatt ttatctagtg
     4441 tattactttt aatttcatca ataacattgt tactttatgg tgttattatc aattaagtta
     4501 aatatgattt ttaatttaga agttaaaaaa tgccaactat acctagggat gatatagttg
     4561 gcatttcgta tatatattaa aacaatgagg attgtgtaat gagattattc tgagattgaa
     4621 aattcagctg atgcttcgaa tttcacatct ttacctagca ttactccacc agtttcaagt
     4681 gcttggttga agttaatgcc atatttttct ctattgattg taccagtaac aataatacct
     4741 gttacttgag aaccatccat aggattctta cttactccgt tgaattcaac gtcgaatgtt
     4801 tcttcgttag tgataccttt aattgttaaa tcaccaacaa ctttgttttc tgtaattgat
     4861 tttgtcacaa aagtgatttt atcaaattca tcagtaccaa agaaatcacc agattttaag
     4921 tggttatcac gtgcttcgtt tttagtgtta attgagcttg gaataattgt tgtagtagct
     4981 ttcaaagtac tgaagtcatt aatatctcct tcaacagcta catcaaattg atcaaatgaa
     5041 cctttcactt tagaaaccat taaatgttta atttggaatt ctaaactact gtgtgcacca
     5101 tcaaaagtaa agttagtcat aatataaaac ctccatattt ttatctctta gatatatttt
     5161 ttatacttga tatacataca ataccaccta aaaaacaaag atgcaagcat tttatttcga
     5221 attcgaatat ttttctgtga tgtatttaaa gaatgaccta taaaacacca cactattgtt
     5281 ataccctagt caattaattc aaacataaat aagtgtaacc aacgttcaat aaatttagca
     5341 gaaaggctta aattcaagcg agacaaagct atggacgaca ttatcaatca aggagatatt
     5401 gtgttttata aataaaatac tatgacatta tctaaaaaat aaaattaaaa taccaacagt
     5461 ttcttaaaaa gttatgagcc acataataaa aatgttataa ttgtgcataa taaaacatag
     5521 ggagaatgtt taatgcataa aaaatattta ttgctatttt ttctgttatt atcagttgca
     5581 ttgttatata gctgttccaa gcaaaatgag aaagctcaaa ataaatatgt taatccaaat
     5641 gagtatgcaa agcataaatc gaaaatggat gaacattggg aaacatatca cggccaagtt
     5701 tatcatgtgt tttatcaccc attaattaca gacccaaaag ttgcgtttac aggagataca
     5761 caccaagcta agggcaacaa tgattggatg attactgtaa gtgaatttaa aaaatcattg
     5821 aacgaattat ataaaaataa ttacatcatc gttaatccac atgatgtata cgacttatca
     5881 tctcatcatg taaaagccaa aaaaataaaa ttgccgaaag gtaaaaagcc actaatcatc
     5941 tcaattgatg atatgaatta ctatagttac atgagacacc atggttatgc tgaccgttta
     6001 gtactcgata aaaataaaca tgttgtttct gaaacgacag actcaaaagg ccatgctact
     6061 tattctgatg acaatgatat cgtgccaatt ttaaataaat ttgtaaaaga gcatccagat
     6121 ttttctttaa atggtgaaaa aggtgttgtt gctttaaccg gttatgaggg cgtattaggt
     6181 tatcgcacga atgaattaac gagtaaagat tatacaaaga ataaaaaggc agttgaggaa
     6241 gttgttcgcg caatgaaacg ggatggatgg tcatttgcga gtcattcata tggtcacatt
     6301 aattttgaaa aaacatcttt agaaggtatt aaacgtgata ctaaaagatg gaaagatgaa
     6361 gttgaaccaa ttgtaggtaa aacagatatg tttgtatttc cacatggcgc acaggataga
     6421 tatacacaag cgtatgatta tttggtagat gaagcagagt ttaagtttat tgcaggtgtc
     6481 ggtccaaaca attttacaga tatatcagca acgaacgttt accaagatag ggttgcgatt
     6541 gatggtctaa acttatttga atttaaatat aaactcaaac cgttttttaa tcctgaaaat
     6601 gtatatagta aacaagatag acaattcttt aaaggtaatc gggattatga agaatagtta
     6661 aatttaataa aaagatagaa agaaaataac tttacataat aaggcaagga caatatgtgc
     6721 aagaagtaca acttcaatat aaaaatcttg gttaagcatt tttataggca caaatgtctt
     6781 gcctttttct tttgtaaaaa tttaaaaaca atacaccgaa ttttctgaaa aaggttgtaa
     6841 tgtattgcta aaaatgataa gttattaatc atattacact ttagtgtggt agagaagtaa
     6901 agcgaacaac gaaaatacca agtgatatta aatacagtat tgaaagtaaa gggtggtcga
     6961 gtgaataatt cagaacaatt aattgcgtta aaagaatcgg aaacagcatt tttaaaatat
     7021 tttaataaag cggattatga gttagttgat tttagtgtgg ttgaaaagtt ggactggaaa
     7081 caattgaacc atgaggattt gcagcagatg ggtgagcgaa atttttggca acatgagcat
     7141 caaatttatg cacttcgaaa tgattttaca gatcaattat tgcgttatta ctcaatgtat
     7201 ccaactgcag caacaaaagt ggcatacaca ggtttaatca ttcggaataa tgaagcggct
     7261 gtacaagtgg gtttggaaaa ctatgcacca tcattagcga atgtacaaca gagcttaaag
     7321 ctatttattc agtttattca acagcagttg agagacaacg tgcattttgt tgtattggga
     7381 cattatcaat tgcttgatgc cttgctcgat aaatcgttac aaacaccaga catactatca
     7441 atgattgagg aacgtaattt atcgggattg gttacatatt tgtcgactga acatccaatc
     7501 gtgcaaatct tgaaagagaa tacgcaacaa caattaaatg tattggaaca ctatattcca
     7561 aatgaccatc cagcactcgt tgaattaaaa atatgggaac gttggttaca tacacaaggt
     7621 tacaaagaca tccatttaga tattactgcg cagccaccta gatcctatta cacaggttta
     7681 tttattcaat gtcattttgc tgaaaatgaa tctcgagttt taacaggtgg ttattacaaa
     7741 ggaagcatcg aagggtttgg attaggatta acactttaag taagggagta tgcacaatgt
     7801 taagaatcgc catagcaaaa gggcgtctaa tggatagttt aattaactat ttagatgcaa
     7861 ttgaatatac gacattatca gaaacattaa aaaatagaga acgccaatta ttattaagtg
     7921 tagataatat tgaatgcatt ttagtaaaag gaagtgacgt tccaatctat gtggaacaag
     7981 gaatggccga cataggcatt gttggtagcg acatattaga tgagcgccaa tataatgtta
     8041 ataatttgtt gaatatgcct tttggagcat gtcattttgc ggttgcagcg aaacctgaaa
     8101 cgaccaatta tcgtaaaatc gcaacgagtt atgtacatac tgctgaaaca tattttaaat
     8161 caaaaggtat tgatgtcgaa ttgattaaat tgaatggttc tgttgaatta gcttgtgtcg
     8221 tagatatggt agacggaatt gtcgacatcg ttcaaacagg tactacgcta aaagcgaacg
     8281 gactggttga aaagcaacat attagtgata tcaatgcaag attaataact aataaagcag
     8341 cttattttaa aaaatcacaa ttaatagagc aatttattcg ctctttggag gtgtctattg
     8401 ccaatgctta atgcacaaca atttttaaat caattttcat tagaagcacc attagatgag
     8461 tcattgtatc caattattcg cgatatttgt caggaagtta aagttcatgg agataaggct
     8521 ttgaaaatgt ataatctaac attcgatcat acgaaaacag atcatttaga aattagtcat
     8581 gaacaaatta aagcagcatt tgacacatta gatgaaaaaa caaaacaagc attacaacaa
     8641 agttatgaaa gaattaaagc atatcaagaa agtattaaac agacgaatca acagttagaa
     8701 gaatcagtgg agtgttatga aatataccat ccactagaaa gtgtgggtat ttatgtgcct
     8761 ggtggcaaag caagttatcc atcaacggtt ctaatgacag cgactttagc acaagtagca
     8821 ggtgtagaaa atattgttgt tgtgacacca cctcaaccta acggagtatc ccaagaggta
     8881 ttagctgcat gttatattac gcaagttaat caagtgtttc aagttggtgg tgctcaaagt
     8941 attgctgcat tgacttatgg aacagaaacg atacctaaag ttgataagat tgtaggtcca
     9001 ggtaaccaat ttgttgcata tgccaaaaaa tatttatttg gacaggtagg tattgatcaa
     9061 attgcaggac caacagaaat agcactgatt attgacgaca ccacagattt agatgccatc
     9121 gtatatgatg tatttgcgca agcagaacat gatgaattag cacgtacata tgtcattagt
     9181 gaagatgcgc aagtccttaa agatttagaa tcacgtattg ctaaagcatt gcctaatgtg
     9241 gacagatacg acattgtttc taaaagtatc gctaatcaac actaccttat ccatgctagt
     9301 aattttgatg aagcatgcca tgtcatgaat acaatcgcgc ctgaacatgc gtcgattcaa
     9361 acagtaaatc ctcaaccata tattgaaaaa gtgaaatatg tgggtgcatt gtttattgga
     9421 cattattcgc cagaggtcat aggagattac gttgcaggtc caagtcatgt attacctaca
     9481 aatagaacag ctagatttac caatgggtta tcggtcaatg atttcttaac acggaacacg
     9541 gtcatccatt tatcaaaaga tacgtttgaa caaattgctg attcagcaca acatattgct
     9601 catgttgaag cattatacaa tcaccagcag tctattttaa tacgtcagtc ttaggggagt
     9661 gtaattgaaa tgatttatat tgataaaaat gaaagtccag ttacgccgtt ggatgaaaaa
     9721 acaatgacgt ctattattag tgcaacgcca tataatttat atcctgatgc agcatatgaa
     9781 caattcaagg aagcttatgc taagttttac ggattatcgc ctgaacaaat tattgcagga
     9841 aatggatctg atgaattgat tcaaaagtta atgctgatca tgccagaagg tccggcttta
     9901 acgctaaatc ctgatttttt tatgtatcaa gcatatgcgg cacaagtaaa tcgtgaaatt
     9961 gcatttgtag atgcaggatc agatttaacg tttgatttgg aaaccatttt aacgaaaatc
    10021 gatgaagtac aaccatcatt ttttattatg agtaatccac ataacccttc aggcaagcaa
    10081 tttgatacgg catttttaac agctattgca gataagatga aagcattaaa cggatacttt
    10141 gtcattgatg aagcatattt agattatggt acggcatatg acgtggaact ggcaccacac
    10201 atcttaagaa tgcatacatt atcaaaggcg tttggaattg ccggcttaag attaggtgtc
    10261 ttaattagta ctgctggaac gataaagcat attcaaaaaa tagaacatcc atatccatta
    10321 aatgtattta cgctaaatat tgcgacttat atttttagac atagagaaga gacaagtcga
    10381 tttttaacaa tgcaacgaca gttagctgag cagttaaaac aaatatttga tacacatgtt
    10441 gcagataaaa tatcagtatt cccatcaaat gccaattttg tacttactaa aggttcagca
    10501 gcgcaacaat taggacaata cgtatatgaa caaggattta aacctcgttt ttatgatgag
    10561 ccggtgatga agggctatgt aagatactca attgcaaccg aaccacagtt aaaccaatta
    10621 gaagaaattg ttaaagaatg gagcgcaaaa tatgatttat caaaaacaac gaaacacagc
    10681 tgaaacacaa ctaaatattt caatatcaga tgaccagtca ccatcgcata ttaatacagg
    10741 tgtgggcttt ttaaatcata tgttaacatt gtttacattt catagcggtc tgtcattaaa
    10801 cattgaggca caaggtgata tcgatgtaga tgatcaccat gtaactgaag atatcggcat
    10861 tgttattggc caattgttac ttgaaatgat taaagataaa aagcatttcg ttcgttatgg
    10921 agcgatgtac attccaatgg atgaaacatt agcacgtgtc gttgtggata taagtgggcg
    10981 tccatactta tctttcaatg catcattaag taaagaaaaa gttggcacgt ttgatacgga
    11041 gttagtagaa gaatttttta gagcagtcgt aatcaatgca agattaacaa cgcatattga
    11101 tttaattcgt ggaggtaata cacaccatga aattgaagct atattcaaag cgttttcccg
    11161 ttcattaggc atagcgctaa ctgcaactga tgatcagcgt gtgccgtcat cgaaaggtgt
    11221 gattgaatga ttgtcatcgt tgattatgga ttagggaata ttagtaatgt aaaacgcgct
    11281 attgaacatt tggggtatga ggtggttgtc tcaaataacc aaaatataat tgatcaagca
    11341 gaaacaatca tattgcccgg tgtcggccat tttaaagatg cgatgtcaga gataaaacga
    11401 ttaaatctcg atgcaatatt ggctaagaat actgataaga aaatgatcgg tatttgtcta
    11461 ggaatgcagt taatgtatga gtatagtgat gaaggcgatg catctggatt agggtttatc
    11521 ccaggaaata tttcgcgtat ccaaacagaa tacccagtgc cgcacttagg ttggaataat
    11581 ttagtgagta agcatcctat gttaaatcaa gatgtttact tcgtacattc ttaccaagcg
    11641 ccgatgtcag aaaatgtcat tgcatatgcg cagtatggta ctgatattcc agctattgtc
    11701 caatttaaca attatattgg tattcaattc catcctgaaa aaagcggtac atatgggtta
    11761 caaattttgc gtcaggcaat acaaggggga tttataaatg attgaattat ggccagcgat
    11821 tgatttgatt gggtcaacaa gtgtgaggtt aacagagggt aaatatgata gtgaagaaaa
    11881 aatgtcgcgt tcggctgaag aaagtattgc ttactatagt cgatttgaat gtgtgaatcg
    11941 tattcatatt gtcgacttga taggtgctaa ggcacagcat gcccgagagt ttgattatat
    12001 taagtcattg aggagattaa caacgaaaga tattgaagta ggtggtggca ttcgcacgaa
    12061 gtcacaaatc atggactact ttgccgcagg aattaattat tgcatagttg gaacgaaagg
    12121 tattcaagat actgattggc ttaaagagat ggcacataca tttccaggtc gcatttattt
    12181 atctgttgat gcttatggag aagatattaa agtgaacgga tgggaagagg acacagagtt
    12241 aaatttattt agttttgtga gacggttatc ggatatacct cttggcggca ttatatatac
    12301 tgatattgct aaagatggca aaatgtccgg acctaacttt gaattaactg gtcaattagt
    12361 aaaggcaacg acgattcctg tcattgcttc cggtggtatt agacatcagc aagatattca
    12421 acgattagcg tcgctaaatg ttcacgctgc cattatagga aaggctgcac atcaagcatc
    12481 tttttgggag gggctaaaat gattaaaaaa cgtatcattc catgtttaga tgtcaaagat
    12541 ggtcgtgtcg ttaaagggat tcaatttaaa ggattaaggg atattgggaa tcctgttgat
    12601 ttagcaatgt attacaatga agcgggtgct gatgaattag tatttttaga catctctaag
    12661 acggaagagg gtcatagctt aatgctagaa gtgattgaac agacagcgtc acgcttgttt
    12721 atccctctta ctgtaggggg tgggattcaa agtctcgatg atattaccca attgttaaat
    12781 catggtgcag ataaagtatc attaaattca agtgctttaa aaaatccaca gctcattaaa
    12841 caagcgagtg ataaattcgg tagacaatgc atctgcatag caattgatag ctattatgat
    12901 cctgaaagaa aagcacatta ttgttgtacg catggtagta aaaagatgac aaatattaaa
    12961 gtatatgact gggtacagca agtagaacag ttaggtgcag gtgagctcct cgttacaagt
    13021 atgggacatg atggtatgaa acaaggcttt gatattgagc atcttgcaaa aataaaatcc
    13081 cttgtaaata ttccaatcat tgcttctggt ggtggtggca atgcacaaca ctttgtagaa
    13141 ttatttgatc agacggatgt ttctgcaggt ttagctgcaa gtatattaca tgatcgagaa
    13201 acgacggttc aatctattaa agaagtgata cggcaaggag gtatagcagt aagatgacca
    13261 attacaaaat tgattttagc aaaggtttag tgccagcaat tttacaagat aatcaaacaa
    13321 aacaagtatt gatgttaggt tatatgaatc aagaagcttt tgataaaacg atagaagatg
    13381 gtgtagtatg tttctattcg cggtcgaaac aacgtctatg gacaaaaggt gaaacatctg
    13441 gtcatacgca acttgttaaa gatattcatg tagattgcga caatgatact attttaattg
    13501 atgtcatacc aaatggacca acatgtcata caggcagtca aagttgtttc aacacagaag
    13561 ttccattttc agtgcaaaca ttagcgcaga cagttcaaga tagtgcccaa tccaataatg
    13621 aaaagtcata tacaaaatat ttattaacag aaggtataga aaagattacg aaaaaatatg
    13681 gtgaagaagc ttttgaagtc gtaattgaag caattaaagg tgacaaaaaa gcatttgtaa
    13741 gtgaagtagc agatgaactt tatcatttat ttgtcttgat gcatgcgcta ggcgtcgatt
    13801 tttcagaaat tgaggcagaa ttagcgcgta gacatcataa gcgcaataac tttaaaggcg
    13861 aacgacaaaa tatcgaacag tggtaaaaca agtatgggct gagatataga gaaaaggatc
    13921 atgtcttata cacttacaaa tattgtggaa aacgtgacat tttcaagttt aaaatacgac
    13981 accaacatat tttaactatg aatgcggtac taaagttgcg aacgcgttat agataagtag
    14041 tggataatca caatacgaaa ccaaaaataa tttgaaaagt aaattgagca actcaggaat
    14101 agatgtcact gttaaagatg ttgaaaagta tatgaatcga tataatgaag ttatgaaggg
    14161 aaaaaatggc gaaaaagcta aaaagttata tttgtcgtta ctacctatta atatcatagt
    14221 tgtctttata ttctttgtat ttatactgtg aataaaaata tatctagcct gaaatagaaa
    14281 tgtcatagcc tatttaaaag acaatctcca ttagaactaa gatgtgcatc ccgaaagttg
    14341 gactaaacaa ctaactttat gggatgtatt tttatgcaaa tcatcataaa ttcgagatta
    14401 agttaaagtt agttcaagag taattaaaca ataaattaaa aatagtagga tacttacttt
    14461 gagggaagaa aattaactgt atatatttag tttaggaaca agtattacgg tttatcctga
    14521 tacaattatt gtggatggga tgatattttt aggtttaaaa tacgacacca gcaaacatca
    14581 taactgtgat agctcataaa tctccacata tagctaatct aaaaaaataa tacatcattg
    14641 gaatcaagcc ccaagcatgt aaatattaaa aatcacaaaa gatatatgta aaaaagttac
    14701 aatttgcata attaaattgt gtctaattat tgactaatta aattttgcca aatataatat
    14761 taattaatga tttgaaatga ttagcgtata cactttaaat tctctttgga gaatatattt
    14821 tttaaataca aatgtaaacg ctttctcgtc aaattaaaca atagaaagga tggtcattat
    14881 gagtgcttgg ttaagtaaat tatttgagtt tattcctcga ataattatca atttgtttat
    14941 ctaaaataaa aaaatagagg tgctgacaat gatgaaaagt caaaataagt atagtattcg
    15001 taaatttagt gtaggtgcat cttccatttt aatagctaca ttactatttt taagtggtgg
    15061 acaagcacaa gcagctgaga agcaagtgaa tatgggaaat tcacaggagg atacagttac
    15121 agcacaatct attggggatc aacaaactag ggaaaatgct aattatcaac gtgaaaacgg
    15181 tgttgacgaa cagcaacata ctgaaaattt aactaagaac ttgcataatg ataaaacaat
    15241 atcagaagaa aatcatcgta aaacagatga tttgaataaa gatcaactaa aggatgataa
    15301 aaaatcatcg cgtaataata aaaatattca acgagataca acaaaaaata acaatgctaa
    15361 tcctagcgat gtaaatcaag ggttagaaca ggctattaat gatggcaaac aaagtaaagt
    15421 ggcgtcacag caacagtcaa aagaggcaga taatagtcaa gattcaaacg ctaataacaa
    15481 tctaccttca caaagtcgaa caaaggaagc accatcatta aataagttag atcaaacaag
    15541 tcaacgagaa attgttaatg agacagaaat agagaaagta caaccacaac aaaataatca
    15601 agcgaatgat aaaattacta actacaattt taacaatgaa caagaagtga aacctcaaaa
    15661 agacgaaaaa acactatcag tttcagattt aaaaaacaat caaaaatcac cagtagaacc
    15721 aacaaaggac aatgacaaga aaaatggatt aaatttatta aaaagtagtg cagtagcaac
    15781 gttaccaaac aaagggacaa aggaacttac tgcaaaagcg aaagatgatc aaacgaataa
    15841 agttgccaaa caagggcagt ataaaaatca agaccctatc gtgttagtgc atggtttcaa
    15901 tggatttaca gatgatatta atccttcagt gttagctcat tattggggcg gtaataaaat
    15961 gaacattcgc caagatttag aagaaaatgg ttacaaagct tatgaagcaa gtataagtgc
    16021 ttttggaagt aactatgacc gcgcagttga actttattat tatatcaaag gcggtcgtgt
    16081 agattatggt gcagcacatg cagcaaaata tggacatgaa cgttatggaa aaacatacga
    16141 aggaatttac aaagactgga aaccaggaca gaaggtacac ctagttggac atagtatggg
    16201 tggtcaaacg atacgtcaac tagaagaatt actgcgtaat ggtagtcgtg aagaaataga
    16261 gtatcaaaag aaacatggtg gcgaaatttc tccactattc aaaggtaata atgacaatat
    16321 gatttcatca attactactt taggaacgcc acataatgga acgcatgctt cagatttagc
    16381 tggtaatgaa gctttagtga gacaaattgt atttgatatc ggtaaaatgt ttggtaataa
    16441 aaactctaga gtagacttcg ggttggctca atggggtcta aaacagaagc caaatgaatc
    16501 atacattgat tatgtcaaac gcgttaaaca atctaattta tggaaatcaa aagataatgg
    16561 attttacgat ctgacgcgtg agggtgcaac agatttaaat cgtaaaacgt cgttgaaccc
    16621 taacattgtg tataaaacat acactggtga agcaacgcac aaagcattaa atagcgatag
    16681 acaaaaagca gacttaaata tgtttttccc atttgtgatt actggtaact taatcggtaa
    16741 agctactgaa aaagaatggc gagaaaacga tggtttagta tccgttattt cttctcagca
    16801 tccatttaat caagcttata caaatgcgac ggataaaatt caaaaaggca tttggcaagt
    16861 aacgcctaca aaacatgatt gggatcatgt tgattttgtc ggacaagata gttctgatac
    16921 agtgcgcaca agagaagaat tacaagattt ttggcatcat ttagcagacg atttagtgaa
    16981 aactgaaaag gtgactgata ctaagcaagc ataagttaaa aagtaaaggg aggaattaac
    17041 aatgactgca gacttctttc aattaatcgg atcattattt agaattctaa aagaattatt
    17101 caagtaaaac cttggcgggg ccccaacaaa gagaaattgg attcccgatt tctacagaca
    17161 atgcaagttg gcggggcccc aacataaaga atttcgaaaa gaaattctac aaacaatgca
    17221 agttggggtg ggacgacgaa ataaattttg cgaaaatatc atttctgccc cactcccatt
    17281 ggcatttacg aagtttaaat gtgcaattag aatatatgta taacaatatt aaacacgcgg
    17341 taaaacgaag tcagtcaatt caaactgatt tcgcccaccg cgtgttttta acatagctta
    17401 atgattaata agcattaatg ttcaatttat atggttgttt tccaataata aacctaaaga
    17461 tatagaattc acgcaatatc ataccgacac ctatacataa tcctaaaatg aatagtagtg
    17521 atatcgctag aaagaccatt gtattatcct caaatatatt tgtatatgca aacaatgagt
    17581 ctagaatgat tggatgtaat aaataaataa agaatgagaa agcactaatc atttgaatcg
    17641 tattaaataa cattgtttta aaatgcgtgc aaatacccaa gataacaata aacataatac
    17701 tattatatgg tgttaatgaa tatgaaaagc tggtaacatt ccaatagtct ccatttgcta
    17761 acgcaataaa cacaaaataa gtagctacag ctaatacaat cataataact aaataacgtt
    17821 ctaagaaatt taaaacacgt tcgtagttat aacccatata tgcacctaag aagaaataaa
    17881 aaatccatcc gaatattata gtgttttcac ttaatggata atagtgtagc acggtatcgt
    17941 gaaacgctgt gttgttcgta aagtaatata aaaatgattg ctgtaaaata aaagataaca
    18001 ataataatat tttactattg aataggttat agttaatttt aaaaatgata taactcaaaa
    18061 taaagaattg catgataaca acgataaaat agccatacca ttgacctaat aggacatttt
    18121 caatgaattg tttattgaaa cttgaatctg ttaataatga ttcactataa ctgtaaaaca
    18181 atcccattaa tatgtaagga ataagtatat attttacgcg tgtagttaag tatctatagg
    18241 tgactttttg atagtttaaa gtcgtcaata actgcgacaa aataataaaa catggtgtac
    18301 caaaaatgac aatattacga atatagaact gtagtactaa agatcctcct tccatattct
    18361 catgttttaa agtaatttgt gttaataaat gtgtaacaat aataattgca catataatag
    18421 cacgtaaata tacgagttca agtctaatct ttttcatgga atccgtccca tctcttaatt
    18481 aaatgctcaa aagcatcatc actaattagt attctaggga tgtaataatc attggagttc
    18541 ggagtgactg ctttttcctc taatgaaaaa ccgtatttta acccagcttt tttgattact
    18601 ggtaatttat cgtcattcat caagccataa ggataggcta tagttttctg cgacttttta
    18661 aagtttttag ttagatattt ttcacttttg tttaaatctt ttatgattgt agcttcagaa
    18721 gatttcatta attttgactt attattttta gataagttat gcaaatcgtg ggtatgtgtt
    18781 tcaaattccc ataacccagt tttatacatt tcttttagtt cttttttact aatcatatcg
    18841 aggttgtgaa agttttcttc cccaacatga cctgtgataa taaacccagt tgccggtatt
    18901 ttatattttt ttaagattgg ataagcattt tcataaatag tttcatccat atcatcaaag
    18961 ttaatccata cacttcgttt tggaaactta ccttttttct tgtaatataa aaattctttc
    19021 aaggttaaaa atttagcatc atgtgatttt agccatttta tttgagattc aaattgtgat
    19081 tgactaacac tataattttt aatttcttta ctactagaaa agaaataaat aaaattattc
    19141 agaaaattcg cttttcttac acggtgataa tttaatgcca gagcactatt ttctttatat
    19201 ttcagttttt taggtgaatc gtcatctgca tttgcaatat gatgaccatc cagtgtgctt
    19261 acaggcaata tgatcaagat actcaacact aaaattatta attttctata cttcacgatt
    19321 ctcttcctct ctgccatttt tgaatcaata tgctaattgt aaaaaataca aaaatgataa
    19381 tcgcgaaaat gcccatagtt tcaaatatat ctaaaatttc agtattttca atgtttaaag
    19441 caacacgtat tgtattgata ctttcgtcat gaatttcaaa tatagtacca atataaacga
    19501 gtagaacaac taaacaatat atccaaaaga cacacgatat agcgataagt gctgtttctc
    19561 ttacaatatt tagcgatgat tttagcgttg ggtattccct ctgtctgggc ttgaccatgt
    19621 tgcgtaacca cctttcttac gttttaatgc ttttggaaat gcgacaagaa ctactgctgc
    19681 gttaataatc cagtatactg tcggatacca acttacaaat atgagtccag ccatattctt
    19741 tttctcgtag cgactatcaa taaagagtgc gactgtaaat tgaataacgt ttataaaagt
    19801 catagtaaat gatgatagta gaaatattga aaaactatat gtcataaatg tatagtctaa
    19861 gaagtttgct gttatgaaca aatagcctaa atatagaagc actatatata cccataaaat
    19921 tgagatgatt tgctcaaaca tcaaaatata taaaggaaac cttttcgttt tcattgtgct
    19981 aaaaaagtct cgtagtaata cttcgtgtcc cccttgagcc catctcacgc gttgcttcca
    20041 aagacctccc aatgtttctg gaaccaacat ccaacacatg gcaagcggtt catacttaat
    20101 acgatatcca cgtaaatgca atttccaaga aactgcaata tcttcggtaa tcatatcagt
    20161 atcccagtag ccaacgtcga caactgcact ttttttaaat agagtgaaga cacccgaaat
    20221 agtattgact gcgccagcaa gtgtctgact tcgcttaata cagccaatta aacttgcata
    20281 ttctatcgtt tgaattttac ctaaaataga actcttattt cgaattctag gattacctgt
    20341 aactgcacca agttttggat catgtttgaa attctcaatc atataatatg gtgcatcttg
    20401 atcaacgata gtatctgcat ccaagcacat tacataatca tatgaagcct gtttaatgcc
    20461 ttgattgagt gcgttggctt tacctctgtt ttcttgtaaa tcgacgaaaa taaagtcatt
    20521 attttctttg attttataga tgagttctgc tgtattatct gaacttccat cattaatgat
    20581 aataatttct tttttctcgt atttgagtgc aagaacatta gacaacgtat cttcaatcgt
    20641 ttcactttcg ttataacagg caagtaaaaa tgtaatgcct tctaattcat ccacatttat
    20701 gtcaggcttc ttgttcaatg aatatctaat ttctctggta aaatagaaat aaattgaacc
    20761 gacaatccag taaatagaca taaatacagg ataaaaaagc aaaaagttaa aaaattgcaa
    20821 tttctttacc tacctttcgt tagttaggtt gtaagccata tggtaattga tagtatttta
    20881 atttgcaata gattgttgtt ataattaaac ggaaatattt gtaattgcaa cttaattttc
    20941 ctgtaacata gtgtgattaa ttttcagtag gggggtttta aaaattgaag gataagatta
    21001 ttgataacgc aataacctta ttttcagaga aggggtatga cggtacaaca cttgatgata
    21061 tagctaaaag tgtaaatata aaaaaagcga gcttatatta ccattttgac tcgaaaaaaa
    21121 gtatttacga acaaagtgtt aaatgttgtt ttgattacct taataatatt attatgatga
    21181 atcaaaataa atcgaactat tcaattgatg ctttatatca attcttattt gagtttattt
    21241 tcgacatcga agaaaggtat attagaatgt acgttcaatt atctaatacg cctgaggaat
    21301 tttctggaaa tatttacgga caaatacaag atttaaatca atcattaagt aaagagatag
    21361 caaaattcta tgatgaatca aagataaaga tgacaaaaga agactttcag aatttaatat
    21421 tgctgtttct tgaaagttgg tatttgaaag catctttttc gcaaaaattt ggagcagtgg
    21481 aagaaagtaa aagtcaattc aaagatgaag tgtattcgct actaaatata tttttgaaga
    21541 aataattttt gttactagtt tgtaataatt aacttacttt tgtaaaaaaa gacatgagat
    21601 tattttttta aatctatata aagttgacaa tacaac
//
LOCUS       DAKPJH010000038        21405 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.038, whole genome shotgun sequence.
ACCESSION   DAKPJH010000038 DAKPJH010000000
VERSION     DAKPJH010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21405
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.038"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            334..708
                     /locus_tag="OY092_001201"
     CDS             334..708
                     /locus_tag="OY092_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HCX1076152.1"
                     /translation="MKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKKQNQMNKIAS
                     KVQNTIKTDIKQEDSNTHVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREID
                     PIKYMKDHKADYEDENVEVEKD"
     gene            858..1256
                     /locus_tag="OY092_001202"
     CDS             858..1256
                     /locus_tag="OY092_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HCX1076153.1"
                     /translation="MEKSIKIMTIIGIVVQGLATVFSLLFMVLAASGVMTTDVSTTVN
                     GEVDPVDAETAAAIFTVLFLFLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVIS
                     GNIITFALWLISGIKLLTNNKPKDEISDLS"
     gene            complement(1505..2329)
                     /locus_tag="OY092_001203"
     CDS             complement(1505..2329)
                     /locus_tag="OY092_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCX1076154.1"
                     /translation="MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAM
                     MAGFIIGIITVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMY
                     FTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHK
                     TLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYN
                     SCLFMGGLIYQVDTLHFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN"
     gene            complement(2568..3875)
                     /gene="brnQ"
                     /locus_tag="OY092_001204"
     CDS             complement(2568..3875)
                     /gene="brnQ"
                     /locus_tag="OY092_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HCX1076155.1"
                     /translation="MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFA
                     LTGILLPFITVIVVAFYDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAY
                     EIGTRHILPVHNQWTLIIFAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSI
                     AVIFNPESALSAPKDKYITHPFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRM
                     KILKYVCFSGLIAAILLGMIYFALAYVGASTAPGNFKDGTDILTYNSLRVFGSFGNIV
                     FGMTVILACLTTCIGLVNACATFTKKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKI
                     AVPLLTLIYPVSIALVLISFANMFSTFRFSWAYRLATVITLIISILQILNSFNLLHGV
                     ILKWFMMLPLADIDLAWLVPFMLFAIIGFIIDVVIRRPKQATT"
     gene            4459..5349
                     /locus_tag="OY092_001205"
     CDS             4459..5349
                     /locus_tag="OY092_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HCX1076156.1"
                     /translation="MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQAS
                     IPASQKVNLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIAL
                     DLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
                     ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQKDHKLVMLFG
                     DNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKA
                     KDKLRKNAIKQFDPKTGEVK"
     gene            5599..6648
                     /locus_tag="OY092_001206"
     CDS             5599..6648
                     /locus_tag="OY092_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076157.1"
                     /translation="MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNK
                     EGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVL
                     VFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
                     ESAKYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFI
                     ENLPGYKPQNLTLNFMISFLFVISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLAN
                     VVISQTLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLF
                     SILTIRKIDPLKAIG"
     gene            6661..7338
                     /locus_tag="OY092_001207"
     CDS             6661..7338
                     /locus_tag="OY092_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076158.1"
                     /translation="MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIIALVGPSGSGK
                     STFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQ
                     QFTLLKKKNKNVMSNEDYQQLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSI
                     ILADEPTAALDTENAIEVIKILRDQAKKRKKACIIVTHDERLKAYCDRSYHMKDGVLN
                     LENETVE"
     gene            7546..8577
                     /locus_tag="OY092_001208"
     CDS             7546..8577
                     /locus_tag="OY092_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HCX1076159.1"
                     /translation="MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLV
                     EAFNKYVGGEVFGIKFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMD
                     LLPGFFAGYMIGYVMKYTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIG
                     DIIQSSTNTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAF
                     MNGTLFHRLKLGDRKSTIAVSIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGL
                     INDATGTATPIAGFLVMFGFNHPTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQD
                     MINRGAVDA"
     gene            8920..10038
                     /locus_tag="OY092_001209"
     CDS             8920..10038
                     /locus_tag="OY092_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCX1076160.1"
                     /translation="MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQK
                     EYVMGKAYVLNEDYPIVCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAEN
                     LGRLGETVAFLSASGQDSEWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMT
                     YGLADMEVFDYITPEFFNKRSHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVIT
                     TVSSPKMKNMPDSLHAIDWIITNKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIV
                     TNGVKELIYRSGEEEIIKSVMPSNSVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGM
                     VNAKKTIETKYTVRQNLDQQQLYHDMEDYKNGKFTKVY"
     gene            10013..10936
                     /locus_tag="OY092_001210"
     CDS             10013..10936
                     /locus_tag="OY092_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HCX1076161.1"
                     /translation="MANLQKYIEYSREVQQARENNQPIVALESTIISHGMPYPQNVEM
                     ATTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILATSKDVAKVSRRDLAEVVAMK
                     CVGATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNVTVICAG
                     AKSILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADIHLTK
                     QQLNLEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQGIKGKDATPFLLGKIVEK
                     TNGKSLAANIKLVENNAALGAKIAVAVNKLL"
     gene            10947..12167
                     /locus_tag="OY092_001211"
     CDS             10947..12167
                     /locus_tag="OY092_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCX1076162.1"
                     /translation="MNILFAITGIAFALFVAFLFSFDRKNIDFKKTLIMIFIQVLIVL
                     FMMNTTIGLTILTALGSFFEGLINVSKAGINFVFGDIQNKNGFTFFLNVLLPLVFISV
                     LIGIFNYIKVLPFIIKYVGIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRL
                     SRAKLYTIATSGMSAVSMAMLGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDD
                     SDVEIDNLTKSTETKSVNGKTGKPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLM
                     EAINIMFGSVGLNFKQLIGYVFAPIAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDF
                     KNVLGDVSARTQGIISVYLVSFANFGTVGIIVGSIKGISDKQGEKVASFAMRLLLGST
                     LASIISGSIIGLVL"
     gene            complement(12272..13804)
                     /locus_tag="OY092_001212"
     CDS             complement(12272..13804)
                     /locus_tag="OY092_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HCX1076163.1"
                     /translation="MKEVGFGTLNWVAVIIYLLAMLFIGVYFTKRASQSTNSFFTASG
                     RLPSWVVGFSIYATTLSAITFMSTPEKAFLTDWSYIAGNIAIVAIIPLLIYFYVPFFK
                     KLKVTSAYEYLEARFGPSIRVIGSLLFVVYHLGRVAIVIYLPTLAITSVSDMNPYIVA
                     SLVGLLCILYTFLGGFEGVVWSDFIQGVILLGGALVIIILGVMNIKGGFGTVFADAIE
                     HKKLISADNWKLNTAAAAIPIIFLGNIFNNLYQYTASQDVVQRYQASDSLKETNKSLW
                     TNGILALISAPLFYGMGTMLYSFYTHEAVLPKGFNTSSVVPYFILTEMPPFVAGLLIA
                     AIFAAAQSTISSSLNSISACISIDIKQRFFGKGSERHEVNFARFIIIIAGIFGFGMSL
                     YLIASNSNDLWDLFLFVTGLFGVPLAGVFAVGIFTKRTNTFGVICGLILGIIFAYVYN
                     GVGKGNSPFYVSTISFTVAFVFAYILSFIVPSKHKKDITGLTIFEKDKPSTYISKTAT
                     KK"
     gene            complement(13844..14725)
                     /locus_tag="OY092_001213"
     CDS             complement(13844..14725)
                     /locus_tag="OY092_001213"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HCX1076164.1"
                     /translation="MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLY
                     VNGSSGENFLLNTEQKKQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYD
                     ALSAVTPFYYPFTFEEIRDYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEK
                     IVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRAR
                     KIFDLARQGQIQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPF
                     NEAHRQTLDQLIAKYDL"
     gene            14883..15743
                     /locus_tag="OY092_001214"
     CDS             14883..15743
                     /locus_tag="OY092_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HCX1076165.1"
                     /translation="MYYIAIDIGGTQIKSAVIDKQLNMFDYQQIPTPDNKSELITDKV
                     YEIVTGYMKQYQLIQPVIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPY
                     VKVKNDVNAALLGELKLHQYQAERIFCMTLGTGIGGAYKNNQSHIDNGELHKANEVGY
                     LLYRPTENTTFEQRAATSALKKRMIDGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAE
                     DVAEGIAQIQVMYDPGLILIGGGISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSK
                     NDAALYGCLQ"
     gene            complement(16020..16820)
                     /locus_tag="OY092_001215"
     CDS             complement(16020..16820)
                     /locus_tag="OY092_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCX1076166.1"
                     /translation="MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAI
                     GTSPATMTRFSHKLDYENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEF
                     IDNDIIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISA
                     SLLSHSDMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTD
                     QSRNTDHQFINTQIATLFLIDIVSYHLLENTNLSQTYQHTKSIILDNK"
     gene            16960..17628
                     /locus_tag="OY092_001216"
     CDS             16960..17628
                     /locus_tag="OY092_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HCX1076167.1"
                     /translation="MLPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTK
                     EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPK
                     ETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ
                     NDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFVQ
                     VMED"
     gene            complement(17759..19072)
                     /locus_tag="OY092_001217"
     CDS             complement(17759..19072)
                     /locus_tag="OY092_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HCX1076168.1"
                     /translation="MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
                     HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVF
                     KIGPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPI
                     FKTPGKSAVDAVASFVGRYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIV
                     AKTLGLMPHWNLYFWITLVITFVVTAITAWLPPITNESTEYYNGQEGEQEVAIEGSRL
                     KTAYAEAMKQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDW
                     LGYIFYPFIYIFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAII
                     FFSALVPCILATEIKIPVWKLIIIWFLRVALSLLITIPVALLIFG"
     gene            19490..>21405
                     /gene="lip2"
                     /locus_tag="OY092_001218"
     CDS             19490..>21405
                     /gene="lip2"
                     /locus_tag="OY092_001218"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip2/Geh"
                     /protein_id="HCX1076169.1"
                     /translation="MLRGQEERKYSIRKYSIGVVSVLAATMFIVSSHEAQASEKTPTS
                     NAAAQKETLNQPGEQGNTITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQST
                     QNSKTIRTQNDNQVKQDSERQGSKQSHQNNAINKTERQNDQVQNTHHAERNGSQSTTS
                     QSNDVDKSQPSIPAQKVLPHHDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDT
                     HQPAHQIIDATQDDTVRQSEQKPQVGDLSKHIDGQNSSEKPTDKNTDNKQLIKDALQA
                     PKTRSTTNAAADAKKIRPLKANQVQPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNK
                     FKVIEELRKQGYNVHQASVSAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGK
                     TYKGIMPNWEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHKAHGGEISPLFTG
                     GHNNMVASITTLATPHNGSQAADKFGNTEAVRKIMFALNRFMGNKYSNIDLGLTQWGF
                     KQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNMTSMNPNITYTTYTGVS
                     SHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEWRKNDGVVPVISSLHPSNQPFINVT
                     NDEPATRRGIWQVKP"
BASE COUNT         7642 a         3284 c         3934 g         6545 t
ORIGIN      
        1 tactataatt ataaatagtt aaatatttgg ttatgaaata aatgtgtggg aggcaatttt
       61 tagagataca tagcaatgta aaggtatcaa atagttattg cataatttat tatgatgaca
      121 taattttcag tgaatagttg taaattaaca ctgaaataga tgtttatatt aagaagactt
      181 taatatcata attaatcaaa atcttgcgtc aaacatttaa acgaatttta agttgataac
      241 aattggttaa acattgttca aacatcacaa tgataaagca tattatcagt attgtagtgt
      301 gtggaaaatg acagccatct aaggagaaaa atgatgaaaa gaatattggt agtattttta
      361 atgttagcaa ttgtattagc aggttgttct aataaaggag aaaagtatca aaaagatatt
      421 gataaagtgt acaaaaaaca gaatcaaatg aataaaattg cctcgaaagt gcaaaacact
      481 attaaaacag acattaaaca agaagacagt aatacacatg tttataaaga tggtaaagtc
      541 attgttattg gtattcaatt atataaagat cgtgaaaaaa tgtattattt cgcatatgaa
      601 ataaaagatg gtaaggcaga gattaataga gaaatagacc caattaagta tatgaaagac
      661 cataaagcag attatgaaga tgaaaatgta gaagtggaaa aagattaacg taggctttct
      721 ttaaaacttt taaccagttt caaaaagtaa atgagcttta gcgacaataa tttttaaaat
      781 aaatacgata taaatttaaa catttatata taagaacaca aacgtaagtt tgtgaataat
      841 aataaaggag taagacaatg gaaaaatcga tcaaaataat gacaataata ggaattgttg
      901 ttcaaggttt agcaacggta tttagtttac tatttatggt tttagcagca tcaggtgtaa
      961 tgactacaga tgtgtcaaca acagttaatg gtgaggttga cccagttgat gcagaaacag
     1021 cagcagcaat tttcactgta ttattcttat tcctatttat atttggaatc atttcaatta
     1081 ttttaggtgc aatcggtatg tttaaagcat ctaaaaacaa aaaaatgagt ggtatattgt
     1141 tgattattgg agctgtaata agtggtaaca taattacatt tgctttatgg ttaatcagtg
     1201 gtattaaact acttactaat aacaagccta aagatgaaat aagcgactta tcataaacat
     1261 cgtatattga aatttcaaga tttcttaagt aattatattt ctgttagttt ttaacaaatt
     1321 aaccgattaa ataaagtgct ctcttagaag tagattttca gtcaataact gcttttaaga
     1381 gagcattttg tatttgataa tgctcatagc atcggacaaa aagcattgac gaacttaaaa
     1441 aaatacgtta gacaatgcac ttctaaatat taaaggcatc gactaacgca ttgttcaaat
     1501 atagttaatt atttttataa aattgatgat gatcattcaa gtaagcatag aataaaccta
     1561 taatgagtcc gcctccaata tagttaccga taaaagccgc agcgatattc gaaatagctg
     1621 gtatgaagtg caatgtatca acttgataaa ttaaaccacc cataaataag caactgttgt
     1681 aaacgacatg ttcataaccc ataaaggcga atatggtaac accgaacatc atgacaaaca
     1741 tttttgcaag tacatcgtca atttgcatgg cgataactaa tgaaatatta ataaagaagt
     1801 tggcgaatat cgctttcatt aatatactta caaacccagt agacaacgtt ttatgttcta
     1861 taactgctga taattgattt aacatatctg gcgtcattac atttgaaaaa cgcatgaaac
     1921 taaataaaat agcagcacct aaaatatttc ctgcaaagca caataaaaat attttcaata
     1981 ctctagttgg tttaattact ttataataca ggcctacagt aaagtacatg aagttactgg
     2041 ttagtagttc ggagtttgta aataaaatga gtactaacgc aaagctgaat gtaatggcac
     2101 tggccatatt cacaatgcct ggcggtaaat ctggttcgtg tgttgcttta actgataata
     2161 cgaagaccgt aataattccg ataataaatc ctgccatcat cgcgcgtaat aaataacgtt
     2221 ttaaataaac gctttgtaat atatcttttg ttcttattgt ttcgactacg ttatttaccc
     2281 agtcatcccc ataaaatatt ttatcccatt taatatgttt ctccttcaca atgacatcct
     2341 cacttttcat ttgttaatca gagtatacta tgaatcactt tatttgtgaa taatttcaca
     2401 aaattaattt taaaaactaa tatttttgaa taacagctag gattttttaa caaatcattt
     2461 attttaaaat aattaatcgt cagttagtat caatgaataa atacagattt tcatgcaaaa
     2521 aaacctagta atgatgcgac gatcattact aggagattat gcgtctatta agttgtcgct
     2581 tgtttcggac ggcgtataac tacatcgatg atgaaaccga taatagcaaa gagcatgaat
     2641 ggtacaagcc aagctaaatc gatatctgct aaaggtaaca tcataaacca tttcaaaata
     2701 acaccgtgta ataagttgaa actatttagt atttgtaaaa ttgaaataat caatgtaata
     2761 acagttgcga gtcgataggc ccaactgaat ctgaatgtgc taaacatgtt agcaaatgat
     2821 atcagtacaa gtgcaataga cacgggatat attaaagtca ataatggtac agcaattttt
     2881 aaaatcattt ctaaaccaag tgttgtaaat aagaacccta tgatagagaa aataagtgca
     2941 aatattttat aagaaaactt aggtacgtgt ttcttagtaa atgtggcgca agcattgacg
     3001 agtcctatac atgttgttaa acatgcaagt atcactgtca taccaaatac tatgttgcca
     3061 aatgaaccaa atactcgtaa tgagttgtac gtcaatatat ctgtaccatc tttaaagttt
     3121 cctggagctg ttgatgcccc aacgtatgca agtgcaaagt aaatcattcc aagtaatatg
     3181 gctgcaataa gacctgaaaa gcagacatat tttaaaattt tcatgcgatc tgtgaggcct
     3241 ttaaacttat agccattgac aatgactacg gaaaaagcta acgcagcaac aagatccatt
     3301 gtaaaatagc cttccaaact tcctgaaatg aaaggatgtg ttatatattt atccttaggt
     3361 gcacttagtg cagattcagg gttgaaaatg acagcaatac ttaatagagc gaccattaat
     3421 agtaataacg gtgttaataa tttacctaaa ttatcaacga ttttcgatgg atttaaacta
     3481 atccagtaaa cgatggcaaa aaagattgct gcgaatataa ttaaagtcca ttggttgtgc
     3541 acaggtaaaa tgtgtcttgt accaatttcg tacgcgacat ttgcagcacg tggaataccg
     3601 taaaatgctc cgatagacat gtaaatcacg acagcaaaaa taaacccgaa ccatggatgt
     3661 atacgattgc ctacactttc aacaccttca tcataaaatg caacaacaat aacagtaata
     3721 aaggggagta atatgcctgt aagagcaaag cctagcatac caatccacat attttgaccc
     3781 gctgtatggc caagcatggg cgggaatatt aaatttccgg ctccaaaaaa tagtgaaaat
     3841 aacatgaggc ccgaaataat aacttgtttt ttcaatgtaa tttccttcct aaaactagat
     3901 attcataata atttaaaaaa tctgaaaaat aaaaacgttc ttactttatc tttaaatgac
     3961 aatactatga ttctattatt ttataaaaaa gattgcaata ataacgtctt gctattattg
     4021 gataatgaca attaaagtgt cgtttttatg aattaaaata ggtgaaagta agttggaaat
     4081 acgttgaagc gttgtgattt ttatgagaaa ttgtatgagt gaggactgct atttataaaa
     4141 ggtaaactat ggatgagttt atggttgttc caataggtaa ataagagata gcacactgta
     4201 cacataatga tacgtggatg agtgaatatg tctgatagga aggcctagtc actcaaatga
     4261 atttaagttt attacgtgat aaatcacaaa tctctctcat gtgataggtc tcccattaaa
     4321 tcatgcttat atgaaatgtt cacatatttg ttagcttttc aagaaataat attaaatatc
     4381 ttttcatagt atagcaatat taaataaatg catttataat tttaactgta ttttaaatat
     4441 taatcatgag gtgataagat gaataaaatt tcaaagtata ttgcaatagc atcattatcg
     4501 gtagcggtta cagtttcagc gccacaaacg acaaattcta cagcgtttgc caaaagttct
     4561 gctgaagttc aacaaacgca acaagcttct ataccagcat cgcaaaaggt gaatcttggt
     4621 aatcaaaata ttatggcagt ggcttggtat caaaattcag ctgaagcaaa agcattatat
     4681 ttacaaggtt ataacagtgc aaagactcag ttagataaag agattaaaaa gaataaaggt
     4741 aaacataagt tagctattgc tttggattta gatgaaacag ttttagataa ttctccatat
     4801 caaggctatg catcaataca taataaacct ttcccagaag gttggcatga atgggtacaa
     4861 gctgctaaag ctaaacctgt ctatggcgca aaagaattct tgaaatatgc tgacaaaaaa
     4921 ggtgtcgata tctactatat ttctgataga gataaagaaa aagatttaaa ggcaacacaa
     4981 aagaacttaa aacaacaagg tatccctcaa gctaagaaga gtcatatttt actaaaaggt
     5041 aaagatgata agagtaaaga atcacgcaga caaatggttc aaaaggatca taaacttgtc
     5101 atgctatttg gagataattt attagacttt acagacccaa aagaagctac agctgaatct
     5161 cgtgaagcat taattgaaaa acataaagac gatttcggta agaaatatat cattttccct
     5221 aacccaatgt atggtagttg ggaagctaca atttacaaca ataactataa agcaagtgac
     5281 aaagcaaaag ataaattacg taaaaatgct attaagcaat tcgatcctaa aacaggcgaa
     5341 gttaaataat atatgaattg gacgtctaca tgtacttaaa ggtatatgta ggcgttttta
     5401 aattgatcct taaattttaa atgtaccgta caaaaataat agacaattaa ttgcattttc
     5461 cataaatttg cttttaatat aaaaagttcg ggtataatga aggataagtg tatgtataac
     5521 attacagagc gcaacacgac gtacgtgcat ctaagaatat aaacaatgtt taaatcatag
     5581 tagtagggag agaaatgcat gtttttagct tggaatgaaa tacggcgcaa caaattgaag
     5641 tttggactaa ttattggtgt gttaacgatg attagttact tgctattttt attatctgga
     5701 ttggcgaatg gtcttatcaa tatgaataaa gaaggcattg ataagtggca agcagatgcc
     5761 attgttctaa ataaagatgc caatcaaact gtgcaacaat ctgtttttaa caagaaagat
     5821 attgaaaata aatacaagaa gcaagctact ttgaagcaaa caggggaaat tgtgtctaat
     5881 ggccatcaaa aagacaatgt tttagtgttc ggtgttgaaa agtcatcatt tttagttccg
     5941 agtttaatag aagggcataa agcgactaaa gataatgaag tgttagctga tgaaacactt
     6001 aaaaataaag gatttaaaat tggcgacaca ttatcactat ctcaatcaga tgaaaaattg
     6061 catatcgtag gttttacaga aagtgcaaaa tataatgcgt caccagtcat tttcacgaat
     6121 gacgctacca ttgccaaaat caatcctaga ttgactggag ataaaattaa tgcagttgtt
     6181 gtacgtgata caaattggaa agacaaaaaa ttaaaccaag agcttgaagc ggtaagtatt
     6241 aatgacttta ttgaaaattt accaggttat aaaccacaga acttaacatt aaactttatg
     6301 atttcattct tatttgtcat ttcagctaca gttataggca ttttcttata tgtcatgaca
     6361 ttacaaaaaa caagtttatt tggcatatta aaggctcaag gatttacgaa tggctattta
     6421 gcgaacgtag ttatttcgca gacgctcata ttagcattat ttggtacggc atttggctta
     6481 ctgttaacag gcgttacagg tgcattttta cctgatgcag tacctgtcaa attcgatgta
     6541 ctaacattgc tcgtatttgc aattgtgtta atgattgtct ctgtattagg aagtttattc
     6601 tccattttaa caattagaaa aatagatccg ttaaaggcga ttgggtagga ggtgtagcaa
     6661 atgttgaaat ttgaaaatgt aacaaagtca tttaaagatg ggaatcgtaa cattgaagcg
     6721 gttaaagata caaattttga gataaataaa ggtgatatta tagcattggt tggaccttct
     6781 ggctctggta aaagtacatt tctaactatg gcaggtgctt tacaaacgcc gacatctggg
     6841 cacattttaa tcaataacca agatattacg acaatgaagc aaaaagcatt ggcaaaagtt
     6901 agaatgtctg aaataggttt tattttacaa gctacaaacc ttgtaccatt tttaacggta
     6961 aagcaacaat ttacattatt gaaaaagaaa aataagaatg ttatgtctaa tgaagactat
     7021 cagcaactta tgtcacaatt aggtctaact tcattgctta ataagttacc ttcagaaatt
     7081 tcaggtggtc agaaacaacg tgtggcgata gccaaagcgt tatatacgaa tccgtcgatt
     7141 attttagcgg atgaacctac cgcggcgtta gatactgaaa atgcgattga agtcattaaa
     7201 attctacgtg atcaagccaa aaaaagaaag aaagcatgta ttattgttac acatgatgaa
     7261 cgacttaaag catattgtga tcgttcatat catatgaaag atggcgtcct taatcttgaa
     7321 aatgaaacag tagaatagtt ttattaagcc ggtacatcat gtgccggtat ttttatgttt
     7381 atgtattatt tgaataaact ttcacattca attaataata attattatcg aaaattagaa
     7441 atattccgtg aaatataata ttttttgtag taaaatggcc tctaagtatt caatatttaa
     7501 atatggggat tgaatataaa attatcgtaa tgggggtcaa tggttatgga tttattgata
     7561 ggtacattat ttttattttt ggtcttagtg atttttacat tatttacata taaagcacct
     7621 aatggtatgc gtgccatggg agcattagct aatgcagcaa tcgcaacatt tttagtagaa
     7681 gcatttaata aatatgttgg tggcgaagta ttcggtatta aatttttaga agagctagga
     7741 gacgctgcgg gaggtctagg tggtgtcgct gccgctggat taacagcatt agctatcggt
     7801 gtgtcaccag tatatgcatt agttatagca gccgcgtgcg gtggtatgga tttattacca
     7861 ggtttctttg cgggttatat gattggatat gtgatgaaat atacagagaa atatgtgccg
     7921 gatggtgtcg acttaattgg atcgattgtc atcttagcgc cattagctcg tcttattgca
     7981 gtattattaa cgccagtagt gaatagtaca ttgattcgaa ttggtgatat tatccaaagt
     8041 agtacgaata cgaatccaat tatcatgggt atcattttag gtggtattat cacggttgtc
     8101 ggcacagcgc cattgagttc aatggcattg acagcattat taggtttaac gggtgtacct
     8161 atggctattg gtgccatggc agcatttagt tcggcattta tgaatgggac gctattccat
     8221 cgcttaaaat taggtgatcg taagtctacg attgcagtaa gtattgaacc tttatcacaa
     8281 gcagatattg tatcagccaa tccaattcca atctatatta caaatttctt tggtggtgcg
     8341 attgctggtt taattattgc tatgtcaggt ttaattaacg atgcgacagg tacagctaca
     8401 ccgattgcag gatttttagt tatgtttgga tttaatcatc cgacgacaat tgtgatttat
     8461 ggtgtagtaa tggcgattgt aggtgcgctt gcaggttatc ttggttcaat tgtatttaaa
     8521 aaatatccaa ttgttactaa gcaagacatg attaatcgag gtgcagtaga cgcatagcat
     8581 catcatattg aatagtaaaa acaaataaaa catagtaacg tgattcagtc gatgtaacag
     8641 tcgataatga gtcacgtttt tttatagaaa aatataagac ataaaaatgt cataatttat
     8701 tgtcgacaaa tatcatactg tataaacatt tatcattttc tcaagtacct tttacacgat
     8761 ggaatgaact tactttttac gaaattatgc gtattttata aacaaatatc attgatataa
     8821 cggtaaatgt aagcgtttac aacagaaata acagcatgct acgatatttt tgtaaattca
     8881 ctgattcaag tattttaagt caatatgagg agggatgtta tgagcgattc tgagaaagaa
     8941 attttaaaaa gaattaaaga taatccgttt atttcacaac gtgaacttgc tgaggcaatt
     9001 ggattatcta gacccagcgt agcaaacatt atttcaggat taatacaaaa ggaatatgtt
     9061 atgggaaagg catatgtttt aaatgaagat tatcctattg tttgtattgg cgcagcgaat
     9121 gtagatcgta agttttatgt gcataaaaat ttagttgcag aaacatcaaa tcctgtaacg
     9181 tcaacacgct ctattggtgg cgtagcaaga aatattgctg agaacttagg taggcttggc
     9241 gaaacggtcg cttttttatc tgctagtgga caagatagtg aatgggaaat gattaaacga
     9301 ttgtccacac catttatgaa tttggatcat gttcaacaat ttgaaaatgc gagtacaggt
     9361 tcatatacag ctttaattag taaagaaggc gacatgacat atggcttagc agatatggaa
     9421 gtgtttgact acattacgcc tgaatttttc aataagcgtt cacacttatt gaaaaaggct
     9481 aagtgcatta ttgtagattt gaatttaggc aaagaggcat taaacttctt atgtgcctat
     9541 accacgaaac atcaaatcaa attagttatc accacggttt cttccccaaa aatgaaaaat
     9601 atgcctgatt cattacatgc tattgattgg attatcacga ataaagatga aacagaaaca
     9661 tacttaaatt taaaaataga atctactgat gatttaaaaa tagctgctaa acgctggaat
     9721 gatttaggtg ttaaaaatgt tattgtgaca aatggcgtga aagaactcat ttatcgaagt
     9781 ggtgaggaag aaatcattaa gtcagttatg ccatcaaata gtgtgaaaga tgttacaggt
     9841 gcaggcgatt cattctgtgc tgcagtagtg tatagctggt taaatgggat gtctactgaa
     9901 gatatattaa ttgctggtat ggttaacgca aagaaaacga tagaaacaaa atatacagtt
     9961 aggcaaaacc tagatcaaca gcaactttat cacgatatgg aggattataa aaatggcaaa
    10021 tttacaaaag tatattgagt attctcgaga agttcagcaa gcacgggaga acaatcaacc
    10081 gattgtagcg ttagaatcaa caattatatc gcatggtatg ccgtacccac aaaatgttga
    10141 aatggcaaca acagtagagc aaattatcag gaataatggt gccattccag caaccatagc
    10201 cattatagat ggcaaaatta aaattggttt agaaagcgaa gatttagaaa tactggcaac
    10261 tagtaaagac gttgctaaag tatctagaag ggatttagca gaagttgttg cgatgaagtg
    10321 tgttggtgct actactgtag cgacgacgat gatatgtgct gcaatggctg gtattcaatt
    10381 ttttgttaca ggaggtattg ggggcgtcca taaaggtgca gaacatacga tggacatttc
    10441 agcagactta gaagaactgt ctaaaacaaa tgtcactgtt atctgtgcag gtgccaaatc
    10501 aattttagac ttacctaaga cgatggagta tttagaaaca aaaggcgttc cagttattgg
    10561 atatcaaacg aatgaattgc cagcattctt cactcgcgaa agcggtgtta agttaacaag
    10621 ttcggttgaa acgccagaac gacttgctga cattcattta acaaaacagc agttaaatct
    10681 tgaaggtggc attgttgttg ctaatccaat tccatatgag catgccttat caaaagcata
    10741 tattgaagca atcataaatg aagctgttgt tgaagcggaa aatcaaggta ttaaaggtaa
    10801 ggacgccaca ccgttcttgt tagggaaaat tgtagaaaaa acgaatggta aaagtttagc
    10861 agcaaatata aaacttgttg aaaacaatgc ggcgttgggt gctaaaattg ctgtcgctgt
    10921 taataaatta ttgtaggtga tgatacatga atattttatt cgctatcaca gggatagcat
    10981 ttgcactatt tgttgcgttt ttattcagtt ttgatcgtaa aaacatagac ttcaaaaaga
    11041 cgttaataat gatatttatt caagtgttga ttgtgttatt tatgatgaac acaacgattg
    11101 gtttaacaat cttaactgca ttaggctcat tttttgaagg gttaataaat gttagtaaag
    11161 caggtataaa ctttgttttt ggagatatac aaaataaaaa tggctttacg ttctttttaa
    11221 atgtgttgct gccattagtg ttcatttctg tattaatagg catctttaat tatattaagg
    11281 tattaccatt tattatcaaa tatgtaggta tcgctattaa taaaataact agaatggggc
    11341 gcttagaaag ttactttgct atttcaacag caatgtttgg acaaccagaa gtatatttaa
    11401 caataaaaga tattattcca agattatcta gagcgaaatt atatacaatt gcgacgtctg
    11461 gtatgagtgc tgttagtatg gcaatgttgg gttcatatat gcagatgatt gagcccaagt
    11521 tcgtagttac agctgtaatg ttaaatattt ttagtgcgct tatcatcgcc agtgtaatca
    11581 atccctataa atctgatgat agtgatgttg aaattgataa cttaactaaa tcaacggaaa
    11641 cgaaatcagt gaatggaaaa acaggaaaac ctaagaaagt tgcctttttc caaatgattg
    11701 gtgatagtgc gatggatggg tttaaaatcg ctgttgtagt agccgtaatg ttgttagcat
    11761 ttatttcatt aatggaagca attaatatca tgtttggtag tgttggtttg aactttaaac
    11821 agcttattgg ctatgtgttt gcaccaatcg cattcttaat ggggattcca tggagtgaag
    11881 cagttccagc tggctcttta atggcgacca aattaattac aaatgagttt gtagcaatgc
    11941 ttgattttaa aaatgtcctg ggtgatgtat ctgctcgaac acaaggtatc atttcagttt
    12001 acttagtaag cttcgctaat tttggtacgg ttggtatcat cgtaggttca attaaaggca
    12061 ttagtgataa acaaggagaa aaagttgcat cctttgcaat gaggctgtta cttggttcaa
    12121 ctctagcttc aatcatttca ggatcaatta ttggcttagt attgtaaatt aatcgaagta
    12181 tctaaattaa attcatggca aagctaaacc ccatcaccaa gttggcgcaa cagcgcatca
    12241 taacttggtg atgggatttt atcataacaa tctacttttt cgtagccgtt tttgaaatgt
    12301 atgttgatgg tttatctttt tcaaaaattg ttaatcccgt tatatctttt ttatgttttg
    12361 aagggacaat gaagctaagt atataagcaa agacaaaagc aactgtaaat gaaatggtag
    12421 atacatagaa aggtgagtta cctttgccaa caccattata gacataagca aagatgatac
    12481 ccaatattaa tccacaaata acaccgaatg tattcgtacg tttagtgaaa ataccaactg
    12541 caaatacacc agctaatgga acaccgaata atccagttac aaacaagaat aaatcccata
    12601 agtcatttga attagaagca attaagtata gtgacattcc aaaaccgaaa atacctgcaa
    12661 tgatgataat gaaacgtgca aagttaactt cgtgtcgctc gctacctttt ccgaagaagc
    12721 gttgcttaat gtcgattgaa atacaagcag atatagaatt taaactagat gaaatggtag
    12781 actgtgcagc ggcgaaaatg gctgcaataa gtaatcctgc tacaaatggt ggcatctcag
    12841 tcaaaatgaa atatggcact acagatgatg tattgaagcc ttttggtaaa acagcttcat
    12901 gtgtataaaa tgaatacagc attgtaccca taccataaaa taagggtgct gaaattaaag
    12961 ctaggatacc atttgtccat aacgatttat ttgtttcttt taaactatca gaagcttgat
    13021 aacgctgcac gacgtcttga ctcgctgtgt attgatacaa gttgttgaaa atatttccta
    13081 ggaaaataat tggaatggca gctgccgcag tatttagttt ccaattgtct gcactaatta
    13141 attttttgtg ctcaatcgca tctgcaaaga cagtgccaaa accgccttta atgttcataa
    13201 cacctagaat aatgataact aaagcaccac ctaataaaat gacgccttga atgaaatcac
    13261 tccaaaccac accttcgaat ccacctaaaa atgtatataa aatacatagt aaaccaacga
    13321 gtgatgcaac gatataaggg ttcatgtctg atacagatgt aatcgctaat gttggtaagt
    13381 agataacgat tgctacacgc cctagatgat aaacgacaaa taataatgag ccaataacac
    13441 gtatgctagg gccgaatcta gcttctaaat attcatatgc agatgttacc tttaactttt
    13501 taaagaatgg aacatagaaa taaatgagta atggaataat tgctacgata gcgatgttac
    13561 ctgcaatata tgaccaatct gttaaaaatg ctttctctgg tgtagacata aacgtaattg
    13621 cacttaatgt agtagcataa atggaaaaac caactaccca agatggcaag cgaccacttg
    13681 cagtaaagaa actattcgta ctttgactcg cgcgcttggt aaaataaacg ccaatgaaca
    13741 acatagctag tagataaatg ataacggcaa cccagtttag tgtgccaaat ccaacttctt
    13801 tcatgggcaa catccccttt acaatgtatt gattctttga tgtctataaa tcgtattttg
    13861 caatgagttg atctaatgtt tgtcgatgtg cttcgttaaa aggtttgaaa ggtcttttcg
    13921 gtaatcctgc atcaatgcca cgatgacgta atatttcttt caatgttgga taaatcccca
    13981 ttgataacac tgtttcgata atgtcgtttg aatcatgttg tagttggtaa gcttcttgaa
    14041 tttgaccttg tcttgctaag tcgaagattt ttcttgcacg gcgaccatta acgttatatg
    14101 tagaaccaat tgcaccatct acgccagaaa tcgtagcttg aactaacatt tcatcaaagc
    14161 cagataagat taatttgtct gggaatgctt ttctaatacg ttcgagtagg aagaagttcg
    14221 gcgctgtata tttaacacca acaatttttt cgtgattaaa tagctcgctg aattgttcaa
    14281 tagaaatatt cacacctgtt aaatctggta ttgcataaat aatcatattg ttctgtgttg
    14341 cttcgataat atcgaaatag taatctctaa tttcttcaaa agtaaatgga tagtagaatg
    14401 gtgttacggc agaaagtgca tcataaccga gttctgtggc atatttccca agttcaatgg
    14461 cttcatttaa atctaacgaa cctacttgag caatcaattt cactttatcc ccaactgcct
    14521 ctttggcaac tttgaaaact tgcttcttct gctctgtatt taataaaaag ttttcgcctg
    14581 agctaccatt tacataaaga ccgtctaatt cttcagtttc aatggcattt tgagcaattt
    14641 gtttaagtcc ttgttcattt acttgaccat tttcatcaaa aggaacgagt aacgctgcat
    14701 ataaaccttt taaatctttg ttcattatga agtccctcca aaaatcattt gataatatag
    14761 tttacagtta taattgtaaa cgctatcata aaatgtaaca atatcttttt gaaaattgaa
    14821 gtcatattta tgtataatta atgaaaatat ttttcaaaat caatagaaat ggagtgagta
    14881 aggtgtatta catcgcaatc gatattggag gcactcaaat taaatcggcg gttattgata
    14941 agcaattaaa tatgtttgac tatcaacaaa taccaacgcc ggacaacaaa agtgagctta
    15001 ttactgacaa agtatatgag attgtaacag gatatatgaa gcaatatcag ttgatccaac
    15061 ctgtcatagg tatttcatca gcaggcgttg ttgatgaaca aaaaggcgaa attgtatacg
    15121 cagggccaac cattccgaat tataaaggta ctaattttaa gcgattatta aaatcactgt
    15181 ctccttatgt caaagtaaaa aatgatgtaa acgctgcatt actaggcgaa ttgaaattac
    15241 atcaatatca agcagaacgg atcttttgta tgacgcttgg tacaggcatt gggggtgcgt
    15301 acaaaaataa tcaaagtcat attgataatg gtgaacttca taaggcaaat gaagttgggt
    15361 atttattgta tcgtccaact gaaaatacaa cgtttgagca acgtgctgca acgagtgcat
    15421 tgaaaaagcg catgattgac ggaggattta cgagaagcac acatgtgcca gtgttgtttg
    15481 aagcagctga agaaggtgat gatattgcaa aacaaatatt gaatgagtgg gcagaagatg
    15541 tagcagaagg gattgcccaa atacaagtca tgtatgatcc agggcttata ttaattggtg
    15601 gcggtatatc tgaacaagga gacaatctca ttaaatatat cgagccgaaa gttgcacact
    15661 atttaccaaa agactatgtt tatgcaccaa tacaaacgac taagagtaaa aatgatgcag
    15721 cattatatgg ctgtttgcaa tgatgattga aagaaggagt cattctaaaa tagaatttga
    15781 aaccgttacg agagatgaga gctgttgtta gttccacaca tcacactcta tctaggacca
    15841 atctaaacta tatcaaccaa cagtgtgcca cgggcatatt aaattgaaga cgcttgaacg
    15901 tatagatctc aaaaatgtaa aaaaatattt ggtattgaaa ttaaaaaagc acctagcaac
    15961 tcgttgggac aatcacgatg attatctaca gttgcaggtg gatttgaata tacaactagt
    16021 tatttgttgt ctaggataat agatttagta tgttgataag tttgactcag attcgtattt
    16081 tctaataaat gataacttac gatatcgatt aaaaagagtg tcgcaatttg tgtgttgata
    16141 aattgatggt cggtattacg cgattgatcc gttgttaaaa gtactaaatc tgcacaatct
    16201 gtaagtttac taccttcgaa atttgtgatg gcaacgacat atgcaccatg agatttggcg
    16261 acttccgctg cagaaattaa ttccgaagta ttaccactat ttgacatagc aataaacata
    16321 tccgaatgag atagtaggga tgccgatatt ttcattaaat gtgaatcggt agtaacatta
    16381 ccttttagcc ccatacgaat catacgataa taaaattcag tcgctgataa accagagcta
    16441 cctagtccag caaagagtat atgtcgactt gattgaagtt tgtcgataaa ggtttggata
    16501 atgtcgttat caataaattc accagtttgt tgaatgattt gttgatgata tttatgaatt
    16561 ctttgaataa ttgggctatt ttcaataact gtctctgtca tttcttgttg aatattaaat
    16621 tttaaatctt ggaaattctc ataatccagc ttatgactaa agcgtgtcat cgttgctggt
    16681 gatgtaccaa tcgcatgggc taaggagtta atcgttgaaa aggcatcgct atagccattt
    16741 tgtcttatat aattgacgat gcgtttatca gtttttgtaa ataaatgttg ataacgttga
    16801 acacgattct caaatttcat tgtgtcaccc cttcatctta atgattacta ttatatatga
    16861 aaaatatttt caagatagta aaaagcattg ataaaaatta tcttaatgat atattgtaaa
    16921 tgactttacg tgaaaaaacg acttatggag tgaggaataa tgttaccaca tggattaata
    16981 gtatcttgtc aggcactacc agatgaacca ttgcattcat cttttattat gtcgaaaatg
    17041 gcattagctg cgtatgaagg tggtgctgtt ggtattcgcg caaatactaa ggaagacatt
    17101 ttagcaatta aagaaacggt agatttacca gttattggca ttgtgaaacg tgactatgat
    17161 cactcagatg ttttcattac tgcaacgtca aaagaagttg atgaactgat agaaagccaa
    17221 tgtgaagtca ttgcattgga tgcaacgtta cagcaacgtc cgaaagaaac gttagacgaa
    17281 ttagtatcat atattagaac acatgcaccg aacgttgaaa tcatggctga tatcgcgacc
    17341 gttgaagaag ctaaaaatgc cgcacgactt ggctttgatt atattggcac gacgttacat
    17401 ggctatacta gttatacgca aggacaatta ctttatcaaa atgacttcca atttctaaaa
    17461 gatgtactac aaagtgttga tgcaaaagtt attgcggaag gtaatgtcat tacaccggat
    17521 atgtataaac gcgtgatgga cttaggcgtt cattgttcag tcgttggtgg tgcgataaca
    17581 cgaccaaaag aaattacgaa acgttttgtt caagttatgg aagattaaat gataacgata
    17641 aaaaaacgag atgaccatca ttaattaaag gtacctaatt atcttaggtg gctgaatgaa
    17701 tgtaatgggt tcatctcgtt ttgtttgttt acgatagtga ttttattttc aatttgaatt
    17761 atccaaaaat aagtaaagcg acggggatgg tgattaatag cgacaatgcc acgcgtaaaa
    17821 accaaatgat gatgagtttc cagacaggta ttttaatttc agttgctagt atacatggca
    17881 ctaatgctga gaaaaagata atggctgata cgcttactac accgacgaca aatttagtac
    17941 tcattgcagc tttagttact aacaaagatg gtagaaacat ctctacaata gaaatcgctg
    18001 acgcttttgc aagtaaagcc tgatcagcaa ttgggaaaat ataaataaat ggatagaaga
    18061 tatagccaag ccaatcaatg aatggtgtat agttcgctac aatcagtcct aaaaaaccaa
    18121 tcgataatat agaaggcaaa ataccaacag tcatttctaa accgtctttc aaattgtccc
    18181 aaacgttctt cacgagggat ggtgttaatg cattttgttt catcgcctct gcatatgcag
    18241 ttttcagtct gcttccttca atagcaactt cttgttctcc ttcttgtccg ttataatatt
    18301 ctgttgattc attggtgatt ggcggtagcc atgcagtaat tgcagtcacg acaaatgtga
    18361 tgactaaagt tatccaaaag tataaattcc aatgcggcat taatcctaaa gttttagcaa
    18421 cgataatcat aaaagttgct gaaactgttg aaaagccagt cgcaataatc gtggcttctc
    18481 gtttgttgta cattccttgc ttatagacac gattagtaat caataatcct aaggaataac
    18541 ggccgacaaa cgaagctact gcatcgacag cggattttcc tggtgtttta aaaataggtc
    18601 tcataatagg ctccatataa acaccgacaa attctaataa gccatagcct actaataaag
    18661 aaagcgcaat tgcacctact ggaattaaga tacttaatgg catcattaat ttttcaaaca
    18721 agaacggacc atagttagct ttaaatagta ttgatggacc gattttaaat acatacatta
    18781 taccaatcat tgcacctgca actttaaata atgtaatgac caagtttgtg attgaagtca
    18841 taaaagtacg tctcactatt ggtaacgctg taccaattaa aatcataatc agtgcaacat
    18901 agggcataag tggacctatg attgagcgaa tggctagatg aacatgatcg acgaaaatag
    18961 tgttgttacc attaatcgta aaaggaataa agaaacatag tatgcccact aaactataga
    19021 caaaaaaacg ccatgcactt ggttgttgtg cattagaatg atattgattc attaaagcaa
    19081 cccctttgtt taaatgaata cacaaaactg tatgatgcat cttccccttg atgagatgaa
    19141 tcattatttt aatttagaaa aatctgaaaa cttactataa ttgtatagtt tgaattattt
    19201 tcataccaat acaaattaac taattatata tagattgaaa ctatattact taataaaata
    19261 tttatcttaa atgttgttgt gttgattcaa cgccacaact aaaagtgttt ataaattatt
    19321 tggaaatgta catatttgta aatgattagt atcgatttaa tatcgtatta ttaaattttt
    19381 attaattttg tagtcttaat caaaaaataa tatatgtcat gttatattga aggtgcagtt
    19441 gtttttcatt ctcaagaggg ggtcaaaaaa atacttttga ggtgattata tgttaagagg
    19501 acaagaagaa agaaagtata gtattagaaa gtattcaata ggcgtggtgt cagtgttagc
    19561 ggctacaatg tttattgtgt catcacatga agcgcaagcc tcggaaaaaa caccaacgtc
    19621 taatgcagcg gcacaaaaag aaacactaaa tcaaccggga gaacaaggga atacgataac
    19681 gtcacatcaa atgcagtcag gaaagcaatt agacgatatg cataaagaga atggtaaaag
    19741 tggaacagtg acagaaggta aagatacgct tcaatcatcg aagcatcaat caacacaaaa
    19801 tagtaaaaca atcagaacgc aaaatgataa tcaagtaaag caagattctg aacgacaagg
    19861 ttctaaacag tcacaccaaa ataacgcgat taacaaaact gaacgccaaa atgatcaggt
    19921 tcaaaatacc catcatgctg aacgtaatgg atcacaatcg acaacgtcac aatcgaatga
    19981 tgttgataaa tcacaaccat ccattccggc acaaaaggta ttaccccatc atgataaagc
    20041 agcaccaact tcaacaacac ccccatctaa tgataaaact gcacctaaat caacaaaagc
    20101 acaagatgca accacggaca aacatccaaa tcaacaagat acacatcaac ccgcgcatca
    20161 aatcatagat gcaacgcaag atgatactgt tcgccaaagt gaacagaaac cacaagttgg
    20221 cgatttaagt aaacatatcg atggtcaaaa ttcctcagag aaaccgacag ataaaaatac
    20281 tgataataaa caactaatca aagatgcact tcaagcgcct aaaacacgtt cgactacaaa
    20341 tgcagcagca gatgctaaaa agattcgacc acttaaagcg aatcaagtac aaccacttaa
    20401 caaatatcca gttgtttttg tacatggatt tttaggatta gtaggcgata atgcacctgc
    20461 tttatatcca aattattggg gtggaaataa atttaaagtt atcgaagaat tgagaaagca
    20521 aggctataat gtacatcaag caagtgttag tgcatttggt agcaactatg atcgtgctgt
    20581 agaactttat tattacatca aaggtggtcg cgtagattat ggtgcagcac atgcagctaa
    20641 atacggacat gagcgctatg gtaaaacata taaaggaatc atgcctaatt gggaacctgg
    20701 taaaaaggta catcttgtag ggcatagtat gggtggtcaa acaattcgtt taatggaaga
    20761 gtttttaaga aatggtaaca aagaagaaat tgcctatcat aaagcgcatg gtggagaaat
    20821 atcgccatta ttcactggtg gtcataacaa tatggttgca tcaatcacaa cattagcaac
    20881 accacataat ggttcacaag cagctgataa gtttggaaat acagaagctg ttagaaaaat
    20941 catgttcgct ttaaatcgat ttatgggtaa caagtattcg aatatcgatt taggattaac
    21001 gcaatggggc tttaaacaat taccaaatga gagttatatt gactatataa aacgcgttag
    21061 taaaagcaaa atttggacat cagacgacaa tgctgcctat gatttaacgt tagatggctc
    21121 tgcaaaattg aacaacatga caagtatgaa tccaaatatt acgtacacga cttatacagg
    21181 tgtatcatct catactggtc cattaggtta tgaaaatcct gatttaggta catttttctt
    21241 aatggataca acgagtagaa ttattggtca tgatgcaaga gaagaatggc gtaaaaatga
    21301 tggtgtcgta ccagtgattt cgtcattaca tccatccaat caaccattta ttaatgttac
    21361 gaatgatgaa cctgccacac gaagaggtat ctggcaagtt aaacc
//
LOCUS       DAKPJH010000039        21151 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.039, whole genome shotgun sequence.
ACCESSION   DAKPJH010000039 DAKPJH010000000
VERSION     DAKPJH010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21151
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.039"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(174..1433)
                     /gene="femB"
                     /locus_tag="OY092_001219"
     CDS             complement(174..1433)
                     /gene="femB"
                     /locus_tag="OY092_001219"
                     /EC_number="2.3.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemB"
                     /protein_id="HCX1076170.1"
                     /translation="MKFTELTVTEFDNFVQNPSLESHYFQVKENIVTRENDGFEVVLL
                     GIKDDNNKVIAASLFSKIPTMGSYVYYSNRGPVMDFSDLGLVDYYLKELDKYLQQHQC
                     LYVKLDPYWLYHLYDKDIVPFEGREKNDALVNLFKSHGYEHHGFTTEYDTSSQVRWMG
                     VLNLEGKTPETLKKTFDSQRKRNINKAINYGVKVRFLERDEFNLFLDLYRETEERAGF
                     VSKTDDYFYNFIDTYGDKVLVPLAYIDLDEYVLKLQQELNDKENRRDQMMAKENKSDK
                     QMKKIAELDKQIDHDQHELLNASELSKTDGPILNLASGVYFANAYEVNYFSGGSSEKY
                     NQFMGPYMMHWFMINYCFDNGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVQIEELI
                     GDFYKPIHKVKYWLFTTLDKLRKKLKK"
     gene            complement(1452..2714)
                     /gene="femA"
                     /locus_tag="OY092_001220"
     CDS             complement(1452..2714)
                     /gene="femA"
                     /locus_tag="OY092_001220"
                     /EC_number="2.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemA"
                     /protein_id="HCX1076171.1"
                     /translation="MKFTNLTAKEFGAFTDSMPYSHFTQTVGHYELKLAEGYETHLVG
                     IKNNNNEVIAACLLTAVPVMKVFKYFYSNRGPVIDYENQELVHFFFNELSKYVKKHRC
                     LYLHIDPYLPYQYLNHDGEITGNAGNDWFFDKMSNLGFEHTGFHKGFDPVLQIRYHSV
                     LDLKDKTADDIIKNMDGLRKRNTKKVKKNGVKVRYLSEEELPIFRSFMEDTSESKAFA
                     DRDDKFYYNRLKYYKDRVLVPLAYINFDEYIKELNEERDILNKDLNKALKDIEKRPEN
                     KKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFEVVYYAGGTSN
                     AFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIE
                     YVGDFIKPINKPVYAAYTALKKVKDRIF"
     gene            complement(3036..3764)
                     /locus_tag="OY092_001221"
     CDS             complement(3036..3764)
                     /locus_tag="OY092_001221"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HCX1076172.1"
                     /translation="MTKLFIPYIMGNKDLIENATLLSENGTDIIEIGVPFSDPVADGP
                     VIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDT
                     GVYGLIIPDLPYELSQRLKEQFSHYGVKIISLVAMTTDDKRMKDIVSHAEGFIYTVTM
                     NATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIV
                     KRFKSNTREEIIKYLQSIQQTLNN"
     gene            complement(3757..4971)
                     /gene="trpB"
                     /locus_tag="OY092_001222"
     CDS             complement(3757..4971)
                     /gene="trpB"
                     /locus_tag="OY092_001222"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HCX1076173.1"
                     /translation="MNKQIQTEADELGFFGEYGGQYVPETLMPAIIELKKAYKEAKAD
                     PEFQRELEYYLSEYVGRATPLTYAASYTESLGGAKIYLKREDLNHTGAHKINNALGQA
                     LLAKRMGKKKLVAETGAGQHGVASATVAALFDMELVVFMGSEDIKRQQLNVFRMELLG
                     AKVVAVEDGQGTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKE
                     IKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGEDTDKHALA
                     IGKGSPGVLHGTKMYLIQDEGGQVQLAHSISAGLDYPGIGPEHSYYHDIGRVTFENAS
                     DTQAMNALINFTKHEGIIPAIESAHALSYVERLAPTMSKEDIIVVTISGRGDKDMETI
                     RQYMAERGLAND"
     gene            complement(4964..5596)
                     /locus_tag="OY092_001223"
     CDS             complement(4964..5596)
                     /locus_tag="OY092_001223"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HCX1076174.1"
                     /translation="MKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKK
                     LASAVPNHIDKVCVMVNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKI
                     TKALAADENIIQNINKYKEFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGG
                     INSENIQKVNQLKLSHQGYDLASGIEVNGRKDIEKMTAIVNIVKGDRENE"
     gene            complement(5596..6378)
                     /gene="trpC"
                     /locus_tag="OY092_001224"
     CDS             complement(5596..6378)
                     /gene="trpC"
                     /locus_tag="OY092_001224"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HCX1076175.1"
                     /translation="MTILSEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEK
                     EPKLAIIAEIKSKSPTVNDLPERDLSQQISDYDQYGANAVSILTDEKYFDGSFERLQA
                     LTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEV
                     LVEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIH
                     DASDVRKILHSGIDGLLIGEALMRCDNISEFLPQLKMQKVKS"
     gene            complement(6380..7378)
                     /gene="trpD"
                     /locus_tag="OY092_001225"
     CDS             complement(6380..7378)
                     /gene="trpD"
                     /locus_tag="OY092_001225"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HCX1076176.1"
                     /translation="MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSE
                     REIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGV
                     KVIKHGNKSITSNSGSTDLLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQ
                     PVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGA
                     NGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAITLNI
                     LNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEALKKYHQMRGE"
     gene            complement(7384..7950)
                     /locus_tag="OY092_001226"
     CDS             complement(7384..7950)
                     /locus_tag="OY092_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HCX1076177.1"
                     /translation="MILVVDNYDSFTYNLVDIVAQHTDVIVQYPDDDNVLNQSVDAVI
                     ISPGPGHPLDDQQLMKIISTYQHKPILGICLGAQALTCYYGGEVIKGDKVMHGKVDTI
                     SITSNTHKVLYQDVPEQFSIMRYHSLISNPDNFPEELKITGRTKDCIQSFEHKERPHY
                     GIQYHPESFATDYGVKIITNFINLVKEG"
     gene            complement(7947..9353)
                     /locus_tag="OY092_001227"
     CDS             complement(7947..9353)
                     /locus_tag="OY092_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HCX1076178.1"
                     /translation="MDIFYKKIKANVTPEVLAQLHSKKIILESTNQQQTKGRYSVVIF
                     DIYGTLTLDNDVLSVSTLKESYQIIERPYHYLTTKINEDYHNIQDEQLKSLPFISGYV
                     GTCSFDLVRHEFPKLQSIQLEDHKQHDVRLYMVEQVYVFDHYKDELYIIATNQFSNST
                     KSDLENRVNKSIEDLTKIQPFMPTQDFDFKTKEIQSNISEERFIEMIQYFKEKITEGD
                     MFQVVPSRIYKYAHHASQHLNQLSFQLYQNLKRQNPSPYMYYLNIDKPYIVGSSPESF
                     VSVKDQIVTTNPIAGTIQRGETTQIDNENMKQLLNDPKECSEHRMLVDLGRNDIHRVS
                     KIGTSKITKLMVIEKYEHVMHIVSEITGKINQNLSPMTVIANLLPTGTVSGAPKLRAI
                     ERIYEQYPHKRGVYSGGVGYINCNHNLDFALAIRTMMIDEQYINVEAGCGVVYDSIPE
                     KELNETKLKAKSLLEVSP"
     gene            complement(9845..10876)
                     /locus_tag="OY092_001228"
     CDS             complement(9845..10876)
                     /locus_tag="OY092_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HCX1076179.1"
                     /translation="MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNK
                     GALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDGRLAIELIGGFTYNAIEGEYCQI
                     KTDAGQIYTGTICLHETSVHVYKNNHEITRDQKHMEIRVDEVTTSEEDTKSLGISVGD
                     FVSFDPRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPHTTQFYISNNEEI
                     GYGANASIDSKIKEYIALDMGALGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCK
                     INNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAMERTHIDSIKATEKLL
                     YAYCLSPIE"
     gene            11041..12132
                     /locus_tag="OY092_001229"
     CDS             11041..12132
                     /locus_tag="OY092_001229"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HCX1076180.1"
                     /translation="MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKS
                     IGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSKLIDMPTKPGVIVSDTGSTKAMI
                     QQHECNLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEARNEQAANTLK
                     ELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGF
                     RNITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAEA
                     KSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNISISNLRILEVREDI
                     YGALKISFKNPTDRERGMQALSDFDCYIQ"
     gene            complement(12269..13531)
                     /locus_tag="OY092_001230"
     CDS             complement(12269..13531)
                     /locus_tag="OY092_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HCX1076181.1"
                     /translation="MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPLETKLAVVADT
                     KRQGSVVLAATPKLKELGIKTGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRY
                     IPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLL
                     SKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGD
                     LAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRDYHFDEA
                     KVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVM
                     HFADKLCNKQALYRTLSISLSQFINEDERQLSLFEYEYQRKRDECLAKTIDQLHLKYG
                     KGIVSKAVSFTEAGTKHGRLGLMAGHKM"
     gene            13679..13864
                     /locus_tag="OY092_001231"
     CDS             13679..13864
                     /locus_tag="OY092_001231"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HCX1076182.1"
                     /translation="MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIE
                     EMKPNHYGVAGVRKSDQ"
     gene            complement(13952..14935)
                     /locus_tag="OY092_001232"
     CDS             complement(13952..14935)
                     /locus_tag="OY092_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HCX1076183.1"
                     /translation="MDKETNDNEYRRQSEHRTSAPKRKKKKKIRKLPIILLIVVILLI
                     ALVVYIVHSYNSGVEYAKKHAKDVKVHQFNGPVKNDGKISILVLGADKAQGGQSRTDS
                     IMVVQYDFINKKMKMMSVMRDIYADIPGYGKHKINSAYALGGPELLRKTLDKNLGINP
                     EYYAVVDFTGFEKMIDELMPEGVPINVEKDMSKNIGVSLKKGNHRLNGKELLGYARFR
                     HDPEGDFGRVRRQQQVMQTLKKEMVNFRTVVKLPKVAGILRGYVNTNIPDSGIFQTGL
                     SFGIRGEKDVKSLTVPIKNSYEDVNTNTDGSALQINKNTNKQAIKDFLDED"
     gene            15072..15581
                     /gene="msrA"
                     /locus_tag="OY092_001233"
     CDS             15072..15581
                     /gene="msrA"
                     /locus_tag="OY092_001233"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCX1076184.1"
                     /translation="MNINTAYFAGGCFWCMTKPFDTFDGIEKVTSGYMGGHIENPTYE
                     QVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYT
                     NDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKKNPERYAEEQK
                     IRQEYKNKQ"
     gene            complement(15784..18306)
                     /gene="mprF"
                     /locus_tag="OY092_001234"
     CDS             complement(15784..18306)
                     /gene="mprF"
                     /locus_tag="OY092_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HCX1076185.1"
                     /translation="MNQEVKNKVFSILKITFATALFIFVVITLYRELSGINFKDTLVE
                     FSKINRMSLVLLFIGGGASLVILSMYDVILSRALKMDISLGKVLRVSYIINALNAIVG
                     FGGFIGAGVRAMVYKNYTHDKKKLVHFISLILISMLTGLSLLSLLIVFHVFDASLILD
                     KITWVRWVLYVVSFFLPLFIIYSMVRPPDKNNRFVGLYCTLVSCVEWLAAAVVLYFCG
                     VIVDAHVSFMSFIAIFIIAALSGLVSFIPGGFGAFDLVVLLGFKTLGVPEEKVLLMLL
                     LYRFAYYFVPVIIALILSSFEFGTSAKKYIEGSKYFIPAKDVTSFLMSYQKDIIAKIP
                     SLSLAILVFFTSMIFFVNNLTIVYDALYDGNHLTYYILLAIHTSACLLLLLNVVGIYK
                     QSRRAIIFAMISILLITVATFFTYASYILITWLAIIFVLLIVAFRRARRLKRPVRMRN
                     IVAMLLFSLFILYVNHIFIAGTLYALDIYTIEMHTSVLRYYFWLTILIIAIIIGMIAW
                     LFDYQFSKVRISSKIEDCEEIINQYGGNYLSHLIYSGDKQFFTNENKTAFLMYRYKAS
                     SLVVLGDPLGDENAFDELLEAFYNYAEYLGYDVIFYQVTDQHMPLYHNFGNQFFKLGE
                     EAIIDLTQFSTSGKKRRGFRATLNKFDELNISFEIIEPPFSTEFINELQHVSDLWLDN
                     RQEMHFSVGQFNEEYLSKAPIGVMRNEENEVIAFCSLMPTYFNDAISVDLIRWLPELD
                     LPLMDGLYLHMLLWSKEQGYTKFNMGMATLSNVGQLHYSYLRERLAGRVFEHFNGLYR
                     FQGLRRYKSKYNPNWEPRFLVYRKDNSLWESLSKVMRVIRHK"
     gene            complement(18787..19995)
                     /locus_tag="OY092_001235"
     CDS             complement(18787..19995)
                     /locus_tag="OY092_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCX1076186.1"
                     /translation="MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIF
                     IFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAV
                     VGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
                     SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTN
                     IMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIA
                     AVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLK
                     IHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEY
                     DIKESNKIVE"
     gene            complement(19988..20155)
                     /locus_tag="OY092_001236"
     CDS             complement(19988..20155)
                     /locus_tag="OY092_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076187.1"
                     /translation="MKKGLIIPKLSALYGRFVTVKGICMVSLMLVILHKWTVFIQHLM
                     NILSGGESIIE"
     gene            complement(20130..20981)
                     /locus_tag="OY092_001237"
     CDS             complement(20130..20981)
                     /locus_tag="OY092_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HCX1076188.1"
                     /translation="MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMTLNDQ
                     TITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVVSLT
                     DHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
                     ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRR
                     LRRKEYIHAQDDFVSMIKNHYPICYNTAYKILTMIQKQFDVTISESEIIYLTLHIHHF
                     EERINHS"
BASE COUNT         6918 a         3795 c         2963 g         7475 t
ORIGIN      
        1 gcataatatt ttaatcataa aattaaatca ataaaacagc attataatga aaaacattag
       61 attgacaaat acatactagt ttttcttagt gtgaaataat taaaatttcg ctaaaaaaca
      121 tataaaaaag agcctatagc atcaataact ataagcccta acatcattta catctatttc
      181 tttaattttt tacgtaattt atccaatgtt gtgaacaacc aatatttcac tttatgaatt
      241 ggtttataga aatcccctat taattcttcg atttgtacat taaatccacg tttaaagcgg
      301 tatacgccat aatcttcact gttttctgtg aaatcacctg ataaaccata gaaattataa
      361 cgatcataac cattatcgaa gcaatagtta atcataaacc aatgcatcat gtatggtccc
      421 ataaattgat tatatttttc tgatgaacca ccagagaaat aattcacttc atatgcattt
      481 gcaaaataaa cgccagaagc aaggtttaga attgggccgt ccgttttgct caattcactt
      541 gcattcaata attcatgctg atcatgatca atttgcttat ctaattctgc aattttcttc
      601 atttgcttat ctgatttgtt ttctttcgcc atcatttgat cacgacgatt ttctttgtca
      661 ttcaattcct gttgcaactt taacacatat tcatcaaggt caatatatgc taatggtact
      721 aatactttat ctccatatgt gtcaataaag ttataaaaat aatcatctgt ttttgataca
      781 aatccagcac gctcttcagt ttcacgatat aaatctaaga aaagattgaa ctcatcacgt
      841 tcaaggaatc tgactttaac accatagttt atcgctttat taatattacg tttacgttga
      901 ctatcaaatg tctttttcaa tgtttcgggt gttttacctt caaggtttaa tacgcccatc
      961 catcgtactt ggctcgatgt atcatactca gttgtaaagc catgatgctc gtaaccatgt
     1021 gatttaaaca agtttactaa ggcatcattt ttctcgcgac cttcaaatgg cacgatatct
     1081 ttatcatata gatgatataa ccaatacgga tctaatttaa catataaaca ttgatgttgc
     1141 tgtaaatatt tatctaactc ttttaaataa taatcaacta atcctaaatc tgaaaaatcc
     1201 attactggac cacgattcga atagtaaaca taacttccca tagtaggaat tttagagaaa
     1261 aggcttgctg caattacttt gttattgtcg tctttaatac ctaataaaac tacttcaaag
     1321 ccatcattct cacgggtaac tatattttct tttacttgga aataatgact ttccaatgat
     1381 ggattttgta caaagttgtc aaattcggta acagttaact ctgtaaattt catgttttga
     1441 taattccctt cctaaaaaat tctgtcttta acttttttaa gtgcggtata tgctgcgtaa
     1501 acaggtttat taattggttt aataaagtca ccaacatatt caataatttc agcattgtaa
     1561 ccttttttga atttaactac accagcatct tcagcatctt ctgtaaattt accactaaca
     1621 ccatagaaat tataacggtc aatgccatga tttaatgcat aattaatcat ttcccattgc
     1681 actgcataac ttccggcaaa atgacggaat gcatttgatg taccaccagc ataataaaca
     1741 acttcaaatg gattgataaa gaagaaacca gcagagatag gtaattcatt accatgttct
     1801 tcttgtagac gtttaccttc ttcaatcttt tgctcatttg catcaagttg ttgttgtaag
     1861 ttatctcgct tgttatgcgc ttttttattt tcaggacgtt tttcaatatc ctttaatgct
     1921 ttatttaaat ctttatttaa aatatcacgc tcttcattta gttctttaat atattcatca
     1981 aagttgatat acgctaaagg cactaacaca cggtctttgt agtattttaa gcgattgtag
     2041 taaaatttgt catcacgatc agcaaaagct tttgattctg acgtatcttc cataaatgat
     2101 ctaaaaattg gcagttcttc ttcagataaa tatcttactt taacaccatt ctttttaact
     2161 tttttcgtgt ttctttttct aagtccatcc atatttttaa tgatgtcatc tgctgtttta
     2221 tcttttaaat ctaacactga gtgataacga atttgtagca caggatcaaa tcctttatgg
     2281 aatccagtat gttcaaatcc taagttactc attttatcaa agaaccaatc attaccagca
     2341 ttacctgtaa tctcgccatc atgattcaag tattgatatg gtaaatatgg atcgatatgt
     2401 aggtatagac aacgatgttt tttaacatat tttgataatt cattaaagaa aaagtgtacg
     2461 agttcttgat tttcataatc gatcactgga ccgcgatttg aataaaaata cttgaacact
     2521 ttcataacag gtacagcagt aagtaagcaa gctgcaataa cctcgttatt attgtttttt
     2581 attcccacta aatgtgtttc ataaccttca gcaagtttta actcatagtg gccaacagtt
     2641 tgcgtgaaat gactgtatgg catgctatct gtaaaggcac caaactcttt agctgttaaa
     2701 tttgtaaact tcattatcat tactcctatt tgtctctcgt taattaattt catttccgta
     2761 tttgcagttt ttctatttcc cctctgcaaa tgtcaaaaat aataaatcta atctaaataa
     2821 gtatacaata gttaatgtta aaactaaaac ataaacgctt taattgcgta tacttttata
     2881 gtaatattta gatttttgca tacaatttca aaaaaagtaa tatgaacgtt tgggtttgct
     2941 catattactt ttgtatcatt tctattcaat tttataattc accgtttttc actttttcaa
     3001 acagtattcg actaattttt ttaaatcaag taaacttaat tattcaatgt ttgttggata
     3061 gattgtaaat atttaatgat ttcttcacgc gtgttagatt taaatcgctt aacgatttcg
     3121 ctaccaatga cgatgccatc tgcaacctct tttatatctg caacatgttg aggtgttctt
     3181 ataccaaatc ctgcgacaac tggcacattg gctatcgctt taattgactc aatttttcgt
     3241 tttaattctg gatgaaacgc accgttttgc cctgttgtcg cattcatcgt cacagtataa
     3301 ataaagcctt ccgcatggga tacgatatct ttcatacgtt tgtcatcagt agtcatcgca
     3361 actaacgata tgattttgac gccatagtga ctaaattgtt cttttaaacg ctgcgataat
     3421 tcatatggta aatcaggaat aattaagccg tagacaccag tatctcgaca tttttcaaaa
     3481 aacgcttgtt ctccataatg acaaataata ttataatacg tcattaatac atagttacac
     3541 ttaatttgat caccatgttt ttctaattga ttgaaaatat aatctatcgt gatgccttgt
     3601 ttaatcgcct gttgacctgc ttccatgata actggaccat cagcaaccgg atcagagaaa
     3661 ggtacaccaa tttcaattat atctgtacca ttttcactca acaatgttgc attttcaatc
     3721 aaatctttat tgcccataat ataaggtata aataatttag tcatttgcaa gacctcgctc
     3781 tgccatatat tgtctaattg tttccatatc tttatcgcca cgtccagaaa tagttactac
     3841 aataatatct tctttcgaca tcgtaggcgc tagtctttca acataactca gtgcatgtgc
     3901 actttcaatt gcaggtataa taccttcatg ttttgtaaag ttgattaaag cattcattgc
     3961 ttgtgtatca cttgcatttt caaaagttac tctaccaatg tcgtggtaat aagaatgttc
     4021 tggcccaata ccaggataat caagtcctgc tgaaatagaa tgtgctagtt gcacttgccc
     4081 accttcatct tgaattaaat acattttagt accatgtaat acgccaggtg atcctttgcc
     4141 aattgcaagt gcatgtttat cagtatcctc gccttgacct gcggcttcaa caccgtataa
     4201 tgcaacatca tctttaataa atggataaaa tgtaccgatt gcatttgagc caccaccgat
     4261 acatgctaca attgcatccg gaagtcgacc ttctttcttc aatatctgtg attttatttc
     4321 tttaccaatc acactctgaa aatctctaac aatcgttggg aacgggtctg gacctaatgc
     4381 agaacctaat aaataatgtg tatcatctac atgacttacc caatattgca atgctttatt
     4441 aactgcatcc gataaagtcc cttgaccatc ttcaactgcc acaacctttg caccaagtaa
     4501 ttccattcta aatacattaa gttgttgtct tttaatatct tcacttccca taaagacaac
     4561 aagttccata tcaaataatg cagcaaccgt agcactagct acaccatgtt gacccgcacc
     4621 agtttcagca acaagcttct tcttgcccat tcttttagca agcaacgctt gacctaacgc
     4681 attattaatt ttatgggcgc ctgtatgatt tagatcctct cgtttcaaat atattttagc
     4741 gccacctagg ctttcagtat atgatgcagc atatgtaagt ggcgtcgcgc gtcctacata
     4801 ctctgataaa tagtattcca gttctctttg aaactctggg tctgcttttg cctctttata
     4861 agcttttttc aactcaataa ttgctggcat taatgtttct ggaacatatt gccctccgta
     4921 ttcaccaaag aaacctaatt catctgcttc tgtttgtatt tgtttattca ttttctctat
     4981 ctcctttcac aatatttaca attgctgtca ttttttctat atcttttcgc ccatttactt
     5041 ctatacctga tgcaagatca taaccttgat gtgataattt aagttgatta actttttgaa
     5101 tattttcaga gttaatgcct cctgctatca agtaaggtat gtcttttatg tgcttcaaaa
     5161 tagtccagtc atatgtttga ccggtaccac catacgacac tgagggtgtg tcgataataa
     5221 ataaatctac gaactcttta tatttattta tgttttggat tatgttttca tctgcagcta
     5281 aagctttagt gattttaatg cttgaatatt tctttttaat ttcctgtata aaatcaatag
     5341 attctgtgcc gtgtaactgt attgtgttaa ttgacgtatt gcttaatacg tgttcaattg
     5401 ttgttaaatc aggatttacc atgacacata ctttatcgat atgatttgga acagcagacg
     5461 ctaacttttt tatttgggta attgtttgat gccttttact tttttcataa tggatgaaac
     5521 ctatcgcatc aataggtaat tgactggccg ctgtaacatc ctttattgat gtaaagccac
     5581 aaaatttcaa tttcatcatg acttcacctt ttgcattttc agttgtggta aaaattcaga
     5641 tatattgtca caacgcataa gcgcctcacc tattagtaag ccatcgatac cactatgcaa
     5701 gatttttctt acatcagatg catcgtgaat accactttca gaaatataat gatgatttgg
     5761 ttttttattt tctaaaatag tatttgtatg ttccacattt gtgacaaatc gttttaagtc
     5821 cctgttattc acaccaatca atttagcatt aaccttatag gcacgttcta attcatggcg
     5881 atcatgtact tcaactaaca cttctagatt ttgcgatata gcgtagttat ataaatcttt
     5941 caattgttta tcagataaga tgttaacgat caataaaatc atagatgcac cagcttgttt
     6001 agcaacatca atttgaagcg ggtctataat aaagtctttg cataatacgg gtaatgttgt
     6061 ttttgtcgtc aatgcttgta atctttcaaa actaccatca aagtactttt catcagttaa
     6121 aatagacacg gcatttgcac catattggtc ataatctgag atttgttgcg ataaatctcg
     6181 ttcaggtaag tcattaactg taggactctt cgatttgatt tctgcaataa ttgctagctt
     6241 tggttctttc tcaattgcgt ttataaaaga ttttttattc tgaatcttca cacttttcaa
     6301 ggtattaagt ttgtcttgat aatagccatt ttgtaaaagt gactgtttat atttaacaat
     6361 ttctgataaa atcgtcatat tattcacctc tcatttgatg gtattttttc aatgcttcac
     6421 cattatcaat caatgtagtt gcaagttcta tgccttctgc gatggtatcc actttctctg
     6481 caacataaag gcttaaaccc gcatttagta agacaacatc acgtcgactt gactgatctt
     6541 taccattcaa gatattcagt gtgattgcta aattttcttc aggtgaaccg cctttaaaat
     6601 cactattcgg cgcatgtttc aaaccataat cagtcgcatt taatgtgtaa tttttgattt
     6661 ctccatcttc agtcaattca tatatcaaat tatcaccaga tagtgttgct tcatccatac
     6721 catttgcacc atgtaaaacg attgcacgtt ttctacctaa atctttaatc gttttagcaa
     6781 ctaactttaa ctttgtagga tcaaagacgc ctaccatttg atacgttaag tgatatggat
     6841 taattaatgg acccacaagg tttaatattg taggctttcc aatcattttt ctaactggtt
     6901 gcatatactt catgattgga tatgattcag ttgcaccaat gaatacaagg tctttttcat
     6961 ttaattggtt aggtgtatca tcaacagttg ttgtttgtat gttcatttga tttaacaaat
     7021 ccgtactacc tgaatttgag gtaatacttt tattaccatg ttttataact tttacgccag
     7081 cacttgctac aacaaaagca acagtcgttg aaatgttgaa actatttgac ttgtcaccac
     7141 ctgtgccgca cacacacata gccccttcat aacatggttg atgtggatac attgtattaa
     7201 ttaagctacg tacaatatat gttaattctt gttgttggat ttctcgctcc gaataggaac
     7261 taagtaattc atatttaata tcagttccaa tactaggaga aataagtata tcgattagct
     7321 ctttaatgtc gctttcaagt aatatagttt cagtttttat tcttgttagt aatgtcatgg
     7381 ttttcatcct tccttcacta gattaataaa atttgtaatt attttgacac catagtctgt
     7441 agcaaatgat tcaggatggt actgaatacc gtaatgcggt ctttctttat gctcaaatga
     7501 ctgtatacaa tctttggtac gtccagtaat tttcaattct tctggaaaat tgtcagggtt
     7561 acttattaat gaatgatatc tcataattga aaactgttct ggaacatctt gatataacac
     7621 tttgtgagta tttgaagtga tacttatagt atcaactttg ccgtgcataa ccttgtcgcc
     7681 tttaatgact tctccaccgt agtaacaagt cagtgcctga gcccctaaac atatacctaa
     7741 aatgggtttg tgttgatagg ttgatatgat tttcatcaac tgttgatcgt ctaatggatg
     7801 ccctggacca ggagatataa taacagcgtc caccgattga ttcagcacat tatcatcatc
     7861 agggtattga acaatgacgt cagtatgttg agcaacaata tccactaggt tatatgtaaa
     7921 ggaatcataa ttatctacaa ctaagatcat gggctcacct ccaataagct tttagctttc
     7981 aatttcgttt catttagttc tttttcagga atagaatcat atacaacgcc acaaccagct
     8041 tctacgttga tatactgctc atctatcatc atcgttcgaa ttgctaaagc aaaatctaag
     8101 ttatgattac aatttatgta tccaacacca ccactataaa cgcctcgttt atgtggatat
     8161 tgttcatata ttctttcaat tgcacgtaat tttggtgcac ctgaaacggt acctgttggt
     8221 aataaattcg caataactgt cattggtgat aaattttgat ttattttacc tgtgatttca
     8281 cttacgatat gcataacatg ttcatatttt tcaataacca ttaatttagt aatttttgag
     8341 gtaccgattt tacttactct atgaatatca ttacgtccta aatcaactag catacgatgt
     8401 tcgctgcatt cttttggatc attaagtagt tgtttcatat tctcattatc tatttgtgtc
     8461 gtctcaccac gttgaatcgt acctgcaata ggattagttg ttacaatttg atctttgaca
     8521 cttacgaaac tttcgggaga actaccgaca atatagggtt tatcgatatt aagataatac
     8581 atatatggac ttgggttttg tcgttttaaa ttttgataca gttgaaacga aagttgattt
     8641 aaatgctgac tagcatgatg cgcatatttg taaattcttg atggcacaac ttggaacata
     8701 tccccttctg ttattttctc tttgaaatac tgaatcattt cgataaatct ttcttcagaa
     8761 atatttgatt gaatttcttt agttttaaaa tcaaaatctt gtgtaggcat gaatggttgg
     8821 attttagtta agtcttcgat agacttatta actcgattct caagatctga ttttgttgaa
     8881 tttgaaaatt gattcgtcgc gatgatatat aactcatctt tgtaatggtc aaatacataa
     8941 acttgttcaa ccatatataa ccttacatcg tgctgcttgt gatcttctaa ttgtattgat
     9001 tgcaatttag gaaattcatg tcttactaaa tcaaagctac acgtcccaac atatccagat
     9061 ataaacggta atgacttaag ttgctcatct tgaatattat ggtagtcttc atttatttta
     9121 gtcgttaaat aatggtacgg tctttcaatg atttgatacg attcttttaa agtgcttact
     9181 gataatacat cattatctaa agttaaagtg ccataaatat caaaaataac aactgaatag
     9241 cgacctttag tttgttgttg atttgtactt tccaaaatga tcttcttgga atgaagttgt
     9301 gctaaaactt ctggcgttac atttgctttt atttttttat aaaatatatc cattctatac
     9361 gctcctttca aaaaagcgcc agcatcctta tcaatataaa ggacgctgac gcgtggtacc
     9421 acctaaatta accgaatatt cgaaatattc atagttcact ctttactata tataattttt
     9481 ctgttgcaga caaaacccaa tttcattaat ctcggtgtta gttcacatca tccactaact
     9541 ttctgttgct acctttaatt aactactaca ttttgtctaa ataaaaagac accacataac
     9601 gcatatacct gtaaggacgc gttaccgtgg tgccacctta gttaacataa ttcatgttca
     9661 ctttcaaaac tcattcaatt gttttccaaa gtccaattca caagatatgg cgtgctaatt
     9721 cccatcaccc attagctttc tatttgctac gtttcatatc tgctactatt tctttagaaa
     9781 attctaatta tttttatagt tcattatatt acataggtcg ttcacatttg tcaacactaa
     9841 ttgtttactc aattggtgat aagcaatatg catatagtaa tttctctgtc gctttaatag
     9901 aatcaatatg tgttcgttcc attgcatgag atgattcaat gccagcgcca aataaaccat
     9961 gtctgatatc cgcaccagca tgtaaagctg ctgaagcatc tgaaccataa tatggatata
    10021 tgtcgacttt atatggaatg ttatttattt tgcaaagatt aactaggtgc gatttcaatt
    10081 gcttatgata tggacctgaa gcatctttgg cacaaataga aactgtatat tcatccgatg
    10141 cttgaccgtc tcccaacgcg cccatatcta atgcaatata ttctttgatt ttcgaatcaa
    10201 ttgatgcatt tgcaccgtaa cctatttctt cgttattaga aatataaaat tgcgttgtat
    10261 gtggtaatat tatttgctct tcttttaatt tctttagtaa ttgtagtatc atcgctacgc
    10321 tagctttatc atctaaatgg cgagatttaa tgaaacctga tgacgtgata actgtacgtg
    10381 gatcaaagct aacaaaatca cctactgaaa tacctaaact ctttgtatct tcttctgatg
    10441 tagttacttc atcaactctt atttccatat gcttttggtc tctagttatt tcatgattat
    10501 ttttatatac atgaacactt gtttcatgca gacaaattgt tcctgtatat atttgaccag
    10561 catcagtttt aatttggcaa tattcaccct caatcgcgtt atacgtgaat cctccaatta
    10621 attctattgc taagcgccca tcttctttaa tttctttaac cattgcacct aaagtatcaa
    10681 catgagcagt aatacagcgt tgtacttcat catttttgcc tggcactgtt attaataacg
    10741 cacctttatt tgttagtgtt gtttgataac ccaagtcttt tgcatatttt tcgacaaatt
    10801 gaattgcttc ttctgtgtct cctgaaggac tattaatacc tgttaatgtt ttaatcattt
    10861 ctaatattgg ttccattgat ttacccctcc gttgccattg tgttactata ctctttattg
    10921 tagatgattt atctccgttt atctattaat gctattatcg atttttattt actattgcac
    10981 tgtgtcaaca gctcatttac aatgttatta ttctgaaaat ttcgaaataa ggtgatttat
    11041 atgacaacag ttttatttgt tgggcttgga ttaattggtg gaagtcttgc tagcaatata
    11101 aaataccata accctaatac taatattatt gcatacgatg cagatacttc tcagttagat
    11161 aaagctaaat caatcggtat tattaatgaa aaatgtttaa attatagtga agctattaaa
    11221 aaagccgatg taattattta tgcaacacct gttgctatca caaataaata tcttagcaag
    11281 cttatagata tgccaactaa acctggtgtt attgtttctg atactggtag tactaaagca
    11341 atgatacagc aacacgaatg caatttatta aagcataata ttcatctagt cagtggtcat
    11401 ccaatggctg gtagtcataa atctggtgta ctaaatgcta aaaagcactt atttgaaaac
    11461 gcttattata ttttagtcta caatgaggca agaaatgagc aagcagcaaa cacgttaaaa
    11521 gaactgttat cacctactct tgctaaattt attgtaacta ctgctgaaga acacgactac
    11581 gtaacaagcg tcgtaagtca tttacctcat atcgttgcat ctagtttagt tcatgttagt
    11641 caaaagaacg gtcaagaaca tcatttagtc aataaacttg cagctggtgg ttttcgtaat
    11701 atcactcgta tagctagtag taatgcacaa atgtggaaag atatcacctt gagtaataaa
    11761 acgtatattt tagaaatgat tcgacagcta aaaagtcagt ttcaagattt agaaagacta
    11821 attgaaagca atgattctga aaaattgtta tcattttttg ccgaagctaa atcgtatcgt
    11881 gacgcactgc ccgctaaaca actaggtgga ctaaatactg cgtatgatct atatgtggat
    11941 attccggatg aatcaggtat gataagtaaa gtgacttata tcctgagttt acataacata
    12001 tctataagca acttaagaat cttagaagta cgcgaagata tatacggtgc tttaaaaatt
    12061 agtttcaaaa atcctactga ccgagaacgc ggtatgcaag cattgagtga ttttgattgt
    12121 tatatccaat aattattaag tctcttttga taaattccca tgtattctta gatattattg
    12181 tgaaatctat tgtgatatat gaaatattta tctttagaga cttattttat acgaatcaca
    12241 gttatatatt ccttaaaccg tataatcatt acattttatg tccagccatt aaacctaatc
    12301 tgccgtgttt tgtacctgct tctgtaaacg atactgcttt ggacacaata cctttgccgt
    12361 atttcaaatg taattggtct atcgttttag ctagacattc gtcacgtttg cgttggtatt
    12421 catattcaaa cagacttaac tgtcgctcat cctcattaat aaattgactc aaagatatac
    12481 ttagcgtacg atatagtgct tgtttattac ataatttatc tgcgaaatgc attactactt
    12541 tataaatatc tttttctaag tttgttggat ctttcaaagt atattgctta tgtacaccgc
    12601 cttcatcact atagccaaag gcaaaatgta tcgttcttgc cacttttttt cttgctcgaa
    12661 ctctgctagc aacatcttca attaactctt gcattactac ttttgcttca tcaaaatgat
    12721 aatctctcat taatatttga cttttgcata tcgatggatt gctgatcttg tgcttttcac
    12781 gtactttact ctgatctatc ccattcgcat gtagatgcat atcaacacct aaaataccga
    12841 actctttttt taaaaattta tatggatatt tcgctaaatc tcctatagta aaaattcctc
    12901 ttttattcaa tttggcttct gttcgacgat taatacccca aaaatctcgc aagggctgaa
    12961 ttggccataa tttcgttggt acatcttgat atcgccattc agctatacca ttttgactat
    13021 gcttcgcttc aacatccata gcaattttac ttaataacat attagaacca atgcccacag
    13081 tacaataaat gcctgtttct tcataaattt cacgtttaag tctttcgcaa aatgcatgta
    13141 ctgtagaact aaatctatga tagctatcag taacatccat aaaaaattcg tcaatactat
    13201 attggtgtaa atcttcaggt ggaatataac gcaatgcaat cttagaaata gcaactgaaa
    13261 cattaagata tttacgcata cttggattga taatgtaaat atcatttcta tgtggtattt
    13321 caaacaatcg cgaccctgtc ttgatgccta attcttttaa tttaggtgtc gcagccaata
    13381 ctacagaacc ctgacgctta gtatctgcaa caacagctaa ctttgtttct aatggatcta
    13441 gccctttttc aatacaagaa acactcgcaa aaaaactttt ttggtcaata catagaacat
    13501 ccctatcttc taataaatga taattataca ctgttattcc tcccttactt gaattctatt
    13561 atatacgaac acgtgttcta tttcaactat tttagaacaa gtgttctgtt aatttgcaaa
    13621 tgaattttta agtattacat gatatactca aattaataat gattaggagg tttggatgat
    13681 gccaatcgtc aatgtaaaat tattagaagg tcgttcggat gaacaattaa aaaatttagt
    13741 tagcgaagtt actgacgccg tagaaaaaac aacgggagca aatagacaag caattcacgt
    13801 tgttatagaa gaaatgaaac caaaccatta tggtgtggct ggcgtaagaa agtcagatca
    13861 atagttcttc ataagatgca tgccaaataa ttctttgaaa acgaacaagg cgacttctat
    13921 ctgagtatga tagaaatcgc cttgtttatt tttaatcttc atctaaaaag tctttaatag
    13981 cttgtttatt tgtgttttta ttaatctgta atgcactacc atcagtattt gtattgacat
    14041 cttcgtatga gttcttgatt ggcacagtca atgacttaac atctttttca cctcggatac
    14101 caaaactcaa acctgtttgg aaaatccctg aatcaggaat gtttgtattc acatagcctc
    14161 ttaaaatacc tgcgactttt ggtaatttaa caactgttct aaaattaacc atttcttttt
    14221 tcaatgtttg catcacttgt tgctgacgtc gcacgcgtcc gaagtcacct tcagggtcgt
    14281 gacggaatct tgcataacca agtaattctt taccattcaa cctatggtta ccctttttca
    14341 aagatacacc aatatttttc gacatatctt tttcgacatt aattggtaca ccttctggca
    14401 ttaattcatc aatcattttc tcaaatccag taaaatcaac tactgcataa tattcaggat
    14461 taattcctaa atttttatca agtgtttttc taagtagctc tggaccacct aaagcgtatg
    14521 ctgaattaat tttgtgtttt ccatatcctg gaatatctgc ataaatatca cgcatgacag
    14581 acatcatttt catcttttta ttgataaagt catattgaac aaccatgata gaatctgttc
    14641 ttgattgtcc accttgtgct ttatctgcac cgagtacaag aatagaaatt ttaccatcat
    14701 tttttactgg tccattaaat tgatgtactt taacatcttt cgcatgtttc ttggcatatt
    14761 ctacaccgct attgtaacta tgcacaatat atacaactaa tgcgataagt aaaattacaa
    14821 caatcagaag aatgataggt aatttcctaa ttttcttctt cttttttcgc ttaggcgccg
    14881 aagtgcgatg ttcactttga cgtctatatt cgttgtcatt agtttcttta tccatattta
    14941 cctaccttat atcttcaaaa atagattttt gtgtactata ataatcacat attaacgtta
    15001 tataaaaaca attcaaaaag caagtgattt cttaataaat cgtactaagg tctaatgaaa
    15061 ggatgtcaaa aatgaatatt aatacagctt attttgccgg aggttgcttt tggtgtatga
    15121 cgaaaccatt tgacaccttt gacggcatag aaaaagtaac ttctggatat atgggcggac
    15181 atattgaaaa tcctacttac gaacaagtaa aatcaggtac gagtggtcat ttagaaactg
    15241 ttgaaattca atatgatgtt gcattattct catacaataa gttattagaa atatttttct
    15301 cagtcattga cccattagat acaggtggtc aatatcaaga ccgtggccct caatatcaaa
    15361 cagctatttt ctacactaat gatcatcaaa aagaactcgc tgagacttat atcgagcagc
    15421 ttaaaaatac gattaatgct gataaggcaa ttgcaacaaa aatattacca gcgtcacaat
    15481 tttacaaagc cgaagactat caccaagatt tttataagaa aaatccagag cgctatgcag
    15541 aagaacaaaa aatacgccaa gaatacaaaa ataagcaata acatttatac ttgatgaaac
    15601 tgattggact gataataaaa gttaggcgac ttaacttaag ctcatttcaa tattaaaata
    15661 cggtacagat aggaaactta aatattctta tctgtaccgt tttttataaa tcattcttta
    15721 tagaaaccaa aaaatccaag cgcttcaggc ataactgtat acctcttagc acttggattt
    15781 taattatttg tgacgtatta cacgcattac tttagaaagt gattcccaaa gcgaattatc
    15841 tttacgataa actaaaaagc gtggttccca attcggatta tatttagatt tataacgacg
    15901 taatccttgg aaacgatata gaccgttgaa atgttcaaag acacggcctg caagtcgttc
    15961 tcttaaatat gaataatgca attgaccaac gtttgataac gttgccatac ccatattaaa
    16021 ttttgtataa ccttgttctt tactccaaag taacatgtgc aagtataatc catccattaa
    16081 tggtaaatct aactctggca accatctaat taaatcgact gaaatggcat cattaaagta
    16141 tgttggcatt aaactacaga atgcaattac ttcattttct tcatttcgca ttacaccaat
    16201 tggcgcttta gataagtatt cttcattaaa ttgaccaaca gagaaatgca tttcctgacg
    16261 attatctagc cataaatcac ttacatgttg aagttcattt ataaattcag ttgaaaacgg
    16321 tggttcaata atttcgaacg aaatattaag ttcatcgaat ttatttaaag tcgctctaaa
    16381 tccacggcgt tttttacctg aagttgaaaa ttgcgttaaa tcaataattg cttcttcacc
    16441 taatttgaaa aattggttac cgaaattatg atataaaggc atgtgttgat ctgtaacttg
    16501 atagaatata acatcatagc ctaaatactc agcgtaatta tagaatgctt ctaacaattc
    16561 atcaaaggca ttttcatcac ctaacggatc tccaagaacc actaatgaac ttgctttata
    16621 acgatacatt aaaaatgctg ttttattttc attagtgaaa aactgcttgt caccactata
    16681 tatcaagtga ctcaaataat taccgccgta ctgattaata atctcctcgc aatcttcaat
    16741 tttagaagaa atacgtactt tgctaaattg ataatcaaac aaccatgcaa tcatacctat
    16801 gatgatagcg atgattaaaa tcgtaagcca gaagtaatag cgcaatacag atgtatgcat
    16861 ttcaatcgta taaatatcta atgcatataa cgttccagca ataaatatat ggttaacata
    16921 taaaataaat aaactgaata aaagcattgc aactatattt ctcattctta ctgggcgttt
    16981 caacctacgt gctctacgga aagctacaat aagcagaaca aaaataatag ctaaccatgt
    17041 tattaaaata tatgaagcgt aagtgaagaa tgtcgccact gtgattaata aaattgaaat
    17101 catagcaaag ataatggcac gtctactttg cttataaata ccaactacat tcagtaaaag
    17161 taataaacaa gcactagtat gaattgccaa tagaatataa tacgttaagt gatttccatc
    17221 atataaagca tcgtaaacaa tcgttaagtt atttacaaaa aagatcatac ttgtaaagaa
    17281 tactaaaatt gctaatgata atgatggaat tttagcaata atatcctttt gataagacat
    17341 taaaaatgac gtaacatctt tagcaggaat aaagtattta gatccctcaa tgtacttctt
    17401 agctgatgta ccaaattcaa atgatgataa aattaatgca ataattaccg gtacaaaata
    17461 gtacgcaaaa cgatatagaa gtagcattaa taatactttt tcctcaggga cacctaaagt
    17521 tttaaatcct agtaatacaa ctaaatcgaa agcgccgaaa ccaccaggaa taaagctgac
    17581 taaacctgat aatgcagcaa tgataaatat tgcaataaag gacatgaatg atacatgagc
    17641 gtcaacaatt acaccacaga aatataatac aactgcagct gctaaccatt caacacacga
    17701 cactaaagtg cagtacaatc ctacaaaacg attgttttta tcgggtggtc taaccattga
    17761 ataaataatg aataatggta agaaaaatga cactacatat aatacccatc ttacccatgt
    17821 aatcttatct aagattaaag atgcatcgaa aacatggaat acaattagca atgataataa
    17881 gcttaaacct gtcaacattg aaatcagtat taatgaaata aagtgaacca atttcttttt
    17941 atcatgcgta tagtttttgt aaaccattgc tcttacaccg gcaccaataa agccaccaaa
    18001 gcctacaatc gcatttaatg cattaatgat ataacttact cttaaaactt ttcctaatga
    18061 aatatccatt tttaaagctc tagataaaat cacatcatac attgagagaa taacaagcga
    18121 tgccccacca ccaataaata ataagacaag ggacatacgg ttgattttac taaattcaac
    18181 caaagtatct ttaaagttaa ttccagataa ctctcgatac aacgtgatta ctacaaaaat
    18241 aaataaagct gtagcaaacg taatttttaa gattgaaaat actttgtttt taacttcctg
    18301 attcattttt tcacatcaat tctaattatt tctgttataa atcaaaatat atcatataaa
    18361 ccataaaaat agcatatcat ttacctttga tttatataac acttttgtca tattgacatc
    18421 tgtattaaga agtaaataga aaatatttct atctcaaaca gaacaatatg gttatctata
    18481 ctgattcata tttaacataa agaaaatgat gaatcaatac ttatgaaaaa tattattaat
    18541 taacagctga ttatgagtgc ttcttaatat attaaaaata ccacttgttt ttattttcga
    18601 cataataatg aagtactaat caagtggcaa atactcgttt tattattatg tactttagaa
    18661 acggctaaac tttcgtaaaa atttataagc taaacatgtg ctgataatca taaatgtgag
    18721 tgcccaacat tataagcacc ataaaaaata ccaacaaacg tatagtctat tggtattttt
    18781 aattacttat tcaactattt tattactttc tttaatatca tattcaccta catcattacc
    18841 atagaaacga ttgtatcgac gtttaaataa ttggaataaa tgagtaacta atacttttaa
    18901 aatagcatat cccggaatac ctaaaataac gcctacaata ccaagcaatt tgcctgcaca
    18961 aagtaaaatg aaaatgattg taagtggatg aatcttaagt gttttaccca tgatatttgg
    19021 tgaaatgaag tgcccttcaa caaattgtac taaagtccat actactgcta attttaagag
    19081 catccacggc gaagttatag cagctattac aatagctggt gaaatcgcta ttgtaggccc
    19141 taaatatggt acaacacttg taactgccgc aatactagct aatactaagc tatatttcaa
    19201 cccgataacc gaataaccga taaacaacaa tataccgata cagaatgaaa caataatttg
    19261 tccttgaatg tatgaaccaa cttgaacact cattttttca agtagatcat gaaaatcttt
    19321 tcggaatttc ggtggcataa tattcgttga aaattctttg aagtgatgtc catctttaag
    19381 cataaagaat agtacaaatg gtgttgttac aatcacaacg ccaatattag caatcgtttc
    19441 tgcaaacgtt gcaattttag acccaaagcc atctgtaaat tcacttaaca tagatggtat
    19501 tttcttaggt aaagaattta accaatcatt aatttgacta taatacgaag agaaaaacgt
    19561 attatttgct attttatcaa tagaattaat taatttttct agatattgcg gtgaattttt
    19621 aactaaacta tctacttgcg aaccaataat aggtatcaat aaattaacaa ttaacgtaat
    19681 aacacctact acagctagat aaataataga aatacctgca actcttggta ttctataacg
    19741 ttccatcata tttacgattg ggttaaatag atagaataga attaaagaga cgatgatagg
    19801 tgctgctatc gtcttaaaaa cgatgataaa aggatcaaaa acgtatgata ctttttcgaa
    19861 aataaaaata acaataccca acaatactag agctattaat gagaagacta aatcattccc
    19921 accaacaaac ttcatatacc gtgattcggt aaattttaaa aagttctttc ttatattctt
    19981 ttcattttca ttcaattata gattcaccac cacttaaaat attcataaga tgttgtataa
    20041 aaacagtcca cttatgtaaa attactaaca tcaatgatac catacaaata ccctttacag
    20101 taacgaaacg cccgtataat gcacttaatt taggaatgat taatcctttc ttcaaaatga
    20161 tgaatgtgta atgttaaata tataatttca gactcactga tagtaacatc aaattgtttt
    20221 tgtatcatag ttaaaatttt atatgctgtg ttatagcaaa tcggatagtg atttttaatc
    20281 atagacacaa aatcatcttg tgcatgtata tattcttttc ttcttaatcg gcgaattaaa
    20341 aattgtacat gtcttataaa acgttggtat tgtaatgatt ccttatcaac agttgtcaca
    20401 aggtctgatt caatgatatc tatacctttt ttaataacat tattgatcaa agtcatctca
    20461 tgcatagata aatcttctgt gttagatgca atatgtaatg caataaatcc tatctcatct
    20521 tcaggaaaat gtacatctaa tgctgcattt aactgatcaa ttacctgttt agcaatatga
    20581 tatgcatcac tatataactg catagtttcc ataacaaatg gattgctaat aacttgattt
    20641 tgttttaagc gtttatatgc aaatataata tgatccgtta atgaaactac aagttgtttt
    20701 gaatcaacat tcatcgcagt attagaaata aaatttaacg aatcaataat tacttgtaat
    20761 acattatcat cagcgatttc aactaaactt ttataatgtg ctttttgttg ctcactctct
    20821 aatttataaa ttttctctat tgtaatagtt tggtcgttta acgtcattcc ctcttttttg
    20881 ttaaaaccaa tacctttacc gattaaaata acttcttgat cattattagt acatactacg
    20941 acattgttgt tcaatgtttt agtaacaata tattctccca ttatcatcac ctatttttct
    21001 attattaaga ttatatatcg gaaatgccta acttgaaagt ataataaatt aaatacttgt
    21061 gttctattac acgcctatcc tatatgatac atcttaattt aatttcgatg cctctcaaag
    21121 tggaataact ataataaaaa aatctgactc c
//
LOCUS       DAKPJH010000040        21047 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.040, whole genome shotgun sequence.
ACCESSION   DAKPJH010000040 DAKPJH010000000
VERSION     DAKPJH010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21047
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.040"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..578)
                     /locus_tag="OY092_001238"
     CDS             complement(<1..578)
                     /locus_tag="OY092_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HCX1076189.1"
                     /translation="MKVNPNNIELIISAVKEEQYPETELSEVALSGRSNVGKSTFINS
                     MIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYI
                     TKRENLQLVIQLVDLRHDPTQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKN
                     IKTQLDMDPDDTIVSYSSIKNNKQQQIWNLIEP"
     gene            complement(732..1994)
                     /gene="clpX"
                     /locus_tag="OY092_001239"
     CDS             complement(732..1994)
                     /gene="clpX"
                     /locus_tag="OY092_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HCX1076190.1"
                     /translation="MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSE
                     IVEEELAQNTSEAITELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPK
                     EDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENIL
                     LRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTA
                     SVPPQGGRKHPNQEMIQIDTTNILFILGGAFDGIEEVIKRRLGEKVIGFSSNEADKYD
                     EQALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVTALKNILTQPKNALVKQYTKM
                     LELDDVDLEFTEEALSAISEKAIERKTGARGLRSIIEESLIDIMFDVPSNENVTKVVI
                     TAQTINEETEPELYDAEGNLINNSKTSA"
     gene            complement(2145..3446)
                     /locus_tag="OY092_001240"
     CDS             complement(2145..3446)
                     /locus_tag="OY092_001240"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HCX1076191.1"
                     /translation="MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGF
                     RKGKVPRPIFEQRFGVEALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQIEKGK
                     DFIFEATVTVEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVV
                     ENGDTVNIDFSGSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVT
                     FPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRL
                     AEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTY
                     FQISGQDESQLREQMKDDAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNI
                     SVEDIKNTLGNTDIIKNDVRIQKVIDLLRDNAKFVEGTKED"
     gene            complement(3494..3604)
                     /locus_tag="OY092_001241"
     CDS             complement(3494..3604)
                     /locus_tag="OY092_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076192.1"
                     /translation="MQNNTQHFNIVLTKKVDLQIYKRCDFNVCIGNRPMI"
     gene            complement(3609..4538)
                     /locus_tag="OY092_001242"
     CDS             complement(3609..4538)
                     /locus_tag="OY092_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076193.1"
                     /translation="MSDIIQFPNSSIKLYKDIKRAEQDQNYDLMYEYIVQYERQFELT
                     EEIAMMKCRMLYETGSFLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEV
                     IHQIIDEVKDHKTRMALHPLKEFAKSKLIEDEKRLTQSLTDFDTLSMREQTHLILKLI
                     DIGHFQFQETVLYILKSNTYSYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLN
                     GLEHTTLKEKVIPNVMETLNDGALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINA
                     YECYFKNMLGLKCELQSIDAFNFIQQLDLNNNS"
     gene            complement(4557..5165)
                     /locus_tag="OY092_001243"
     CDS             complement(4557..5165)
                     /locus_tag="OY092_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HCX1076194.1"
                     /translation="MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQ
                     YEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMN
                     DVPGAESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKI
                     TVSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL"
     gene            complement(5307..5663)
                     /gene="rplT"
                     /locus_tag="OY092_001244"
     CDS             complement(5307..5663)
                     /gene="rplT"
                     /locus_tag="OY092_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HCX1076195.1"
                     /translation="MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQ
                     YAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISD
                     EKAFAQLVTKAKDALK"
     gene            complement(5710..5910)
                     /gene="rpmI"
                     /locus_tag="OY092_001245"
     CDS             complement(5710..5910)
                     /gene="rpmI"
                     /locus_tag="OY092_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HCX1076196.1"
                     /translation="MPKMKTHRGAAKRVKRTASGQLKRSRAFTSHLFANKSTKQKRQL
                     RKARLVSKSDMKRVKQLLAYKK"
     gene            complement(5939..6466)
                     /gene="infC"
                     /locus_tag="OY092_001246"
     CDS             complement(5939..6466)
                     /gene="infC"
                     /locus_tag="OY092_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HCX1076197.1"
                     /translation="MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAER
                     VDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHD
                     FQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKM
                     DGRQMFIMLAPTAEK"
     misc_feature    complement(6495..6620)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            complement(6695..8188)
                     /locus_tag="OY092_001247"
     CDS             complement(6695..8188)
                     /locus_tag="OY092_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1076198.1"
                     /translation="MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHD
                     AGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYW
                     FNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL
                     ALIKVVTVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLI
                     AGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAL
                     MGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDK
                     LAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGI
                     AVSHYRFRRAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNF
                     SRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQVDLRQDVSMDEIKG"
     gene            complement(8614..10551)
                     /gene="thrS"
                     /locus_tag="OY092_001248"
     CDS             complement(8614..10551)
                     /gene="thrS"
                     /locus_tag="OY092_001248"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HCX1076199.1"
                     /translation="MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNG
                     QLVDLTKPLETDGSIEIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEG
                     GFYYDFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELI
                     DAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIY
                     GTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRRE
                     IERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPM
                     NCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP
                     DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEA
                     ADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDG
                     EHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQ
                     DELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQE
                     TVEKDEFIWNLVDEIRLKKHR"
     gene            complement(10749..10871)
                     /locus_tag="OY092_001249"
     CDS             complement(10749..10871)
                     /locus_tag="OY092_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076200.1"
                     /translation="MFDENMVNKLGDYYFIYGICNEYPDQDRYLKQRYLIHKLY"
     gene            complement(10964..11884)
                     /gene="dnaI"
                     /locus_tag="OY092_001250"
     CDS             complement(10964..11884)
                     /gene="dnaI"
                     /locus_tag="OY092_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HCX1076201.1"
                     /translation="MKQFKSIINTSQDFEKRIEKIKKEVINDPDVKQFLEAHRAELTN
                     AMIDEDLNVLQEYKDQQKHYDGHKFADCPNFVKGHVPELYVDNNRIKIRYLQCPCKIK
                     YDEERFEAELITSHHMQRDTLNAKLKDIYMNHRDRLDVAMAADDICTAITNGEQVKGL
                     YLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLPEFIRTLKGGFKDGSFEKKLHRVRE
                     ANILMLDDIGAEEVTPWVRDEVIGPLLHYRMVHELPTFFSSNFDYSELEHHLAMTRDG
                     EEKTKAARIIERVKSLSTPYFLSGENFRNN"
     gene            complement(11884..13284)
                     /locus_tag="OY092_001251"
     CDS             complement(11884..13284)
                     /locus_tag="OY092_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation and membrane attachment
                     family protein"
                     /protein_id="HCX1076202.1"
                     /translation="MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQA
                     VGLYHFMTQFVKESHNETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDE
                     QETQFVYQLIQPPSAHLFFNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVT
                     RQFTDVFKVPSTKIDIDTSDIPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTK
                     DAKRLITQLATLYGLTADGMKHVILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKL
                     QVKSPVTSSSTGKSSEVNPKPQSDEWFELLEQTSPIDMLASWSESEPTISQKTMVEEL
                     IEREKMSFGVINILLQFVMLKEDMKLPKAYILEIASNWKKKGIKTAKEAYNYAKKVNQ
                     PKNEGSSGNYQKRGSYYGQRNRISKEKTPKWLENRDKPSEEDSAKDNSVDDQQLEQDR
                     QAFLDKLSKKWEEDSQ"
     gene            complement(13285..13755)
                     /gene="nrdR"
                     /locus_tag="OY092_001252"
     CDS             complement(13285..13755)
                     /gene="nrdR"
                     /locus_tag="OY092_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HCX1076203.1"
                     /translation="MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHI
                     EVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTE
                     VSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA"
     gene            complement(13965..14990)
                     /gene="gap"
                     /locus_tag="OY092_001253"
     CDS             complement(13965..14990)
                     /gene="gap"
                     /locus_tag="OY092_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCX1076204.1"
                     /translation="MSTNIAINGMGRIGRMVLRIALQNKNLNVVAINASYPPETIAHL
                     INYDTTHGKYNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNH
                     GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQLDIEAFDIFSNASCTTNCIGP
                     VAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALK
                     EVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAGLEGIIEVEHQ
                     PLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQIGALLTS
                     KETVSAS"
     gene            complement(15160..15783)
                     /locus_tag="OY092_001254"
     CDS             complement(15160..15783)
                     /locus_tag="OY092_001254"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HCX1076205.1"
                     /translation="MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGS
                     KGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQE
                     YLKQGYNVIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYS
                     QISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED"
     gene            complement(15799..16671)
                     /gene="mutM"
                     /locus_tag="OY092_001255"
     CDS             complement(15799..16671)
                     /gene="mutM"
                     /locus_tag="OY092_001255"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HCX1076206.1"
                     /translation="MPELPEVEHVKRGIEPYVINQKIEHVKFSDKVIEGKAQGKETII
                     KGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELED
                     IMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEAL
                     TYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQ
                     EMVFYYVREVLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKI
                     IATRNSHYCPVCQK"
     gene            complement(16687..19317)
                     /gene="polA"
                     /locus_tag="OY092_001256"
     CDS             complement(16687..19317)
                     /gene="polA"
                     /locus_tag="OY092_001256"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HCX1076207.1"
                     /translation="MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKI
                     LKEEKPNHFLVAFDAGKTTFRHEKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKRY
                     ELDNYEADDIIGTLSKEADKAGFQTIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYT
                     PDFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFDTVEGVYEHL
                     DEISGKKLKEKLQNSKEDALMSKELATINVDSPIEVKLEDTLMTHQDEQQEKIELFKK
                     LEFKQLLADIDQSASVEDAIEKTIEIETSFDNVDFTSLKEAAIHFELDGGNYLRNNIL
                     KFSLFTGEKHIVINADDINNYAELVSWLENPNTKKVVYDAKKTYVASHRLGIDIQNIS
                     FDIMLASYIIDPSRTISDVQSVVSLYGQSFVKDDVSIYGKGKKFKVPEDDVLNPYVAS
                     ITDAIYFAKPNMDKQLEEYNQVELLADLELPLAKILSEMEEIGIFTDVHDLEEMEKEI
                     QEKLDVLIRNIHDAAGEDFNINSPKQLGVVLFETLQLPVIKKTKTGYSTAVDVLEQLQ
                     GEHPIIDYILEYRQLSKLQSTYVEGLQKVISDDQRIHTRFNQTLAQTGRLSSVDPNLQ
                     NIPVRLEEGRKIRKAFKPTSKDSVILSADYSQIELRVLAHITQDESMKEAFINGDDIH
                     TATAMKVFGVEADQVDSLMRRQAKAVNFGIVYGISDYGLSQSLGITRKKAKAFIDDYL
                     ASFPGVKQYMSDIVKDAKALGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQG
                     SAADIIKLAMVKFAQKMKETTYQAKLLLQVHDELIFEVPKSEVDSFSEFVEEIMENAL
                     QLDVPLKVDSSYGATWYDAK"
     gene            complement(19611..>21047)
                     /locus_tag="OY092_001257"
     CDS             complement(19611..>21047)
                     /locus_tag="OY092_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076208.1"
                     /translation="LFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNIF
                     EIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTY
                     GWFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLF
                     HCIILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSN
                     NQGIFSKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMI
                     GFITLPLYYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQIT
                     LYSLLIAICVSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKVA
                     SLVLAMIYLSAFIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINK
                     NYQEWFNNYEELPKMTKVKYIPFGSDDS"
BASE COUNT         6486 a         3992 c         2843 g         7726 t
ORIGIN      
        1 ggttcaatta aattccatat ttgttgttgt ttattatttt taattgatga ataacttaca
       61 attgtatcgt ctgggtccat atctaattgt gtcttaatat ttttaatatg cttttgaact
      121 ttaccttttg gaattttgtc ttctttagtg catataacta aagtaggaat atcaaaatgc
      181 ttcaaataat tgtacattaa gatatcatct tgtgttggat catgtcttaa atcaactaat
      241 tgaataacta attgcaaatt ctctctctta gttatatatt cctcaatcat tttcccaaat
      301 ttttcacgtt gtgttttact tactttagca tatccatacc ctggaacatc cacaaaaata
      361 agttgttcat ctatattata aaaatttaac gtttgcgttt tgccgggttg ctgtgatgta
      421 cgtgccatat tttttctgcc aatcatacta ttgataaatg tagacttacc tacattagat
      481 cgaccgctca gtgcaacttc agacaattct gtttctggat attgttcttc ttttactgca
      541 ctaatgatta attctatatt attaggatta actttcattt tatatcctca cttttttata
      601 ttctctttca actctaccat tatataatat ttgaaccttt cggtatacat tataaaaaag
      661 ctccgatcaa agttaaacta tttgagcgtc aactttgatt ggagcttttc acttttataa
      721 cacatcaatg attaagctga tgttttacta ttattaatta aattaccttc tgcgtcgtat
      781 agttctggtt cagtttcttc attaattgtt tgtgctgtaa taactacctt cgttacattt
      841 tcgttagaag gcacatcaaa cataatatcg attaacgatt cttctatgat tgaacgtaaa
      901 ccacgcgcac ctgtttttct ttcaattgct ttttcactaa ttgctgataa agcttcttca
      961 gtgaactcta aatccacatc atctaattcc agcattttag tatattgttt cacaagtgca
     1021 tttttaggtt gcgttaagat gtttttcaac gcagttacat ctaatgtttc taaattagct
     1081 acaattggca cacgtccgat aaattcagga atcaaaccat aggcttgcaa atcttctggg
     1141 cgaatttgtg ctaataatgc ttgttcgtca tatttatcag cttcattgct tgagaaacca
     1201 ataacttttt caccaagacg gcgcttaatc acttcttcaa taccatcaaa ggcaccacca
     1261 agaataaata agatatttgt tgtatcaatt tgaatcattt cttggtttgg atgtttgcgt
     1321 ccaccttgtg gcggaacact cgcagttgtg ccttctaaga ttttaagcaa tgcttgttga
     1381 acaccttcac ctgaaacgtc acgtgttata gatgtgtttt cagatttacg tgcaatttta
     1441 tcaatttcat ctacataaat aatacctttt tcggctttat caatgtcaaa gtcagctgct
     1501 tgaattaatc tcaacaagat attttcaaca tcatcgccta catagccagc ttcagttaaa
     1561 cttgtcgcat ctgcaattgc aaatggtaca ttcaacgtct tggctaaggt ttgagctaat
     1621 aatgttttac cactacctgt tggcccaatt aaggcaatgt tacttttttg taactcaaca
     1681 tcatcttctt ttggtcctaa ttgttgaata cgcttatagt ggttataaac agccacagct
     1741 aaagattttt tagctttttc ttgaccaata acatattcgt ttaaatgatc cataatttct
     1801 ttaggagtag gtaattctgt aatcgcttca gaagtatttt gagctaattc ttcttcgacg
     1861 atttctgagc ataattcaat acactcatta caaatatata caccacttcc tgctacaagt
     1921 ttttttactt gatcttggtc ttttccgcag aaagagcatt tcaaattttc ttcatcttca
     1981 ttgaatttaa acattctttt tacaccccta ttcgttaaag actatactag attggatatt
     2041 acaatgcaac atattaacat acaaactttt tgcttaaaga atagtagcag atacataagc
     2101 tatgcatctg ctactcattt ttgtaattta atatttaatg aagattaatc ttctttagtt
     2161 ccttcaacga actttgcgtt atctcttaat aaatcgataa ctttttggat acgaacatca
     2221 tttttaatga tatcagtatt acctaaagta tttttgatat cttcaactga gatattaaat
     2281 tgtttactca ttttttctaa ttctttatcg atatcttcat cagtagcttc gattttttca
     2341 gcttcagcga tcgcagttaa agttaagtta gttttaacac gttgttctgc atcgtctttc
     2401 atttgctctc ttaattgaga ttcatcttga cctgagattt ggaagtacgt ttgtaaatct
     2461 aaaccttgtt gttgaattct ttgtgcaaat tcagacacca tacgatctaa ttcagtatta
     2521 accattgctt caggaatatc gattgttgta ttatcagtag cttttgtaat cgcttcttct
     2581 ttttcaacat tttcagcatc tgtagctttt tgttcagcta aacgtttacg taagttttct
     2641 ttatactcgt ctactgtatt tgcttccgca tctaattcat tagcaatttc atctgttaat
     2701 tctggaactt ctttaaattt aatttcgtta acttttgttt taaaagttgc ttctttacca
     2761 gctaattctt cagcatggta ttcttctggg aatgttacga caacatcttt ttcttcgtca
     2821 actttcatac cttctaattg ctcttcgaaa ccaggaatga atgaacctga accgatttct
     2881 aaatcgtaac cttcagcttg tccaccttcg aattcttctc cgtcaactga accactaaag
     2941 tcgatgttaa ctgtgtcgcc attttcaaca acaccatctt ctttaactac catttcagct
     3001 aaatgtccta agctgtggtc aatcgcttct tgtaactcat catcagataa ttcagtttct
     3061 tgtttttcaa tttcaagacc tttatagtct cctaatttaa cttctggctc aactgtaact
     3121 gttgcttcaa aaataaaatc tttacctttt tcaatttgag taacacttac ttctggttgt
     3181 gcaactggtt taatatcagt ttcgtcaatt gcttcaccat aagcatctgg taataaaatg
     3241 tcgatagcat cttgatataa tgcttctaca ccaaagcgtt gttcgaaaat tggacgtggt
     3301 actttacctt tacggaatcc aggtacgtta atttgtttaa ccactttttt gaatgcttga
     3361 tctaacgctt tgtttacttt ttctgcagga acagtaacag ttaataaacc ttcgttacct
     3421 tccttttttt cccaagttgc tgtcatgtat atatacctcc atgattaact aatttatttt
     3481 ttcaacttcc ctattatatc ataggtctat tccctataca aacattgaaa tcacaacgtt
     3541 tatatatttg taaatcaact tttttcgtca aaactatatt aaaatgctga gtattatttt
     3601 gcaacaattt aactattatt attcaaatct aattgctgaa taaaattaaa tgcatcgata
     3661 ctttgtaatt cacatttaag tcctaacata tttttgaaat aacattcgta tgcattaatc
     3721 catttattcg tttcaaacaa agtttcaata tcaattggat aaatcatgat agagtgatta
     3781 ttcataatat ggtgtgcttc ttcagcgata tgtaaagcac catcatttaa tgtttccata
     3841 acgttaggta taactttttc tttcagcgtt gtatgttcta gcccatttaa attagctggt
     3901 acaaaagtta catccatacc atacttttca attgtcagtt cttgtgtaca atttgcaaac
     3961 cttaaatact caatcattaa actaattagg ttataactgt acgtattaga ttttaatata
     4021 tataataccg tttcttgaaa ttgaaaatga ccaatgtcta ttaacttcaa aatcaagtgc
     4081 gtctgttccc tcattgataa cgtatcaaaa tcagttaatg actgagtcaa tcgtttttca
     4141 tcttcaatta attttgactt agcaaattct ttaagaggat gtaatgccat tcttgttttg
     4201 tgatctttga cttcatcaat aatttgatga attacttcta ccgcttcaaa atattgtccc
     4261 aaaccaatca aacttttcac gtaataaatc atcaatgcat catattgttg tatgccagtt
     4321 ttcaataaga caattgtttc ttctcttaat tcaagaaatg accccgtctc atataacata
     4381 cggcatttca tcattgctat ttcttcagtg agttcaaatt gacgttcata ttgcacaata
     4441 tattcataca tcaggtcata gttttggtct tgttcagcac gttttatatc tttatataac
     4501 tttatcgaag agttaggaaa ctgaataata tctgacatat atgtcacctc gtttgattat
     4561 aaatcttgaa ggattaatgc gctccacgtt tcgaaatcat catatgactc tatgttgcct
     4621 ttttcaaccc attttattcg taaagtatct gtttctttag cttctacatc attcgtactt
     4681 acagtgattt taaatacaac accaatatgt accttgccca cttcattatt atcgtcatta
     4741 ataaaaccga tatactccat attttgtgaa tcttgctcac ttaaacctac ttcttcttct
     4801 aattctctct gagcattaac tctcaatact tcgttaatag attctgctcc tggaacatca
     4861 ttcatatgac cgcctacacc tattgaagat tgtccatgca atcgagcttc tccaccgcca
     4921 gataatcgtt catacactaa tatctcgcca tgctcatttt caagtaaaca ataagaaatg
     4981 agttgtttat atgatggatc ctcttccata tcgccgcgtc gcttaacttc atattgactt
     5041 agcgcatcaa aaatattttg accttctggt ttattcttat ttaaaaaccc attaaaagta
     5101 ttcttttcat tattaaaaat aatttctcta ggtactacaa tgatttgttc atcaaattta
     5161 gacatcgtat aaaactcctc actttaatgt ttgttctctt aaatgcattt tagcaaatat
     5221 gtcatatttt agcgattaaa tgtggcattt tgctatttaa aaaataaaaa agagatgaca
     5281 atgccatctc ttttttataa gtgttattat tttaaagcat ctttagcttt agttactaat
     5341 tgagcaaatg ctttttcatc agaaattgca atttctgata acattttacg gttaatgtcg
     5401 ataccagctt ttttcaaacc gttcattaaa cgtgagtagc tcatttcatg ttgacgagct
     5461 gctgcgttga tacgtgtaat ccataattta cggaagtcac gtttacgttg acgacggtca
     5521 cggaaagcgt attgacctga tttcattact tgttgcttag ctactttgta taatgtatgt
     5581 tttgaaccga agtaaccttt agctaattta atcgtttttt tacgacgcgc tcttgttact
     5641 gttccacctt taactcgtgg cataaaaaat tcctccttag gtaattccta ccgatttctg
     5701 tatttgttct tattttttgt atgctaataa ttgttttaca cgtttcatgt cgctcttaga
     5761 cactaatcta gctttacgta attgacgttt ttgtttagtg ctcttgtttg cgaataagtg
     5821 agatgtgaaa gctcttgaac gttttaattg acctgaagca gttcttttaa cacgtttagc
     5881 tgctccgcgg tgagttttca tttttggcat aatataagtc ctcctgtaat agctttaatt
     5941 atttttcagc tgttggcgct aacatgataa acatttgacg cccgtccatt ttaggttttt
     6001 gttcaactgt tgctatatct ttgcattcat ctgcatattt ttctagcaca cgttgaccaa
     6061 tttccttatg cgtaatggca cgccctctga aacgaataga tactttacat ttatcgcctt
     6121 tagttaagaa tttacgtccg tttttcaact tagtttggaa atcatgttcc tcaattgttg
     6181 gacttaaacg aatttcttta acattgataa ttttttgttt ctttttcatt tctttttctt
     6241 ttttctgttg ttcgaatttg aatttaccgt aatccataat tcttgcaact ggtggtttcg
     6301 cattcggtgc aacgaccact aagtctaaat ctacacgttc agccatttct aaagcttctc
     6361 gctttgattt aacaccaatt tgttcaccat cttgaccgat taaacgtaat tcttttgcac
     6421 gaattttgtc attgatttga gtttgatctt ttgctatggt tgacacctcc aaaattttta
     6481 cgaaatttgc accaagcaaa aaggaagagc aggtataaaa tacccgctct tccttataca
     6541 cagatatgtg taatgtgatt aacctgccaa ctgctttatg cgtcgctaca ggtgagaagc
     6601 gggtgcttct acttggttcg tttcgtattc aacgttgtta atcatatcaa caattcacat
     6661 ttaagtcaac actataactg taattatttt tattttaacc ttttatttca tccattgaca
     6721 cgtcttgacg taaatctact tgttctaatg gaattttttt cgttttatat cgaagcttat
     6781 gataaataaa gaatgctaaa aatactggaa ttcccatata cgtaattaag aagcgactaa
     6841 aattaaaatc tcctgtttta ataaagtcaa catcttgacc aataattact acaatacata
     6901 aaaagccagc aaataatggt ccgaatggga ataatttagc agtatatttt aatttagatt
     6961 tgtcataatt ttgtttatca aatgctcttc taaatcgata atgacttact gctataccta
     7021 cccaagcaat aaaaccagtt aaaccacttg ctgcaacgat atattcgtat gcaccttttg
     7081 taaggctttg taatacgaaa ataatcacta caatgattgc tgtaacgagt aacgacatat
     7141 atggcacacc gtttttattt gttttaccaa atgcttcaaa cgctaattta tctttactca
     7201 ttgaatatag cattcgagtt gaagcataca tacctgagtt acctgctgat aacacagacg
     7261 ttaaaatgac tgcattcata aatgatgctg caaacgcaaa tccagcattt ttaaacacta
     7321 atgtgaatgg agacgttgct acattatcac taccacccat taatgcacta ctatcataag
     7381 gaattaacat accgataaca aaaatggcta aaatgtaaaa taataaaatt ctccagaata
     7441 cttgtttaat tgctttcggc acagcacgtt caggattttc tgattcacca gccgtaatac
     7501 caattaactc agtaccttgg aatgagaaac cagcgattaa gaatacacct agaattgata
     7561 acaaacttcc gcctagattg ccaccaagaa taggaccttc acctttatta aatatttcga
     7621 atcctacaac atgaccaccc atgattccga caatcgttaa taaaccaatt gcaatgaaaa
     7681 caataactgt aaccactttt atcaatgcca accagtattc actttcacca tagacgcgaa
     7741 ctgataacga attcagacta aaaattataa ctaagaacaa cgcactccat gcccaagcgg
     7801 gtatgccttg caatggtgtc caatattgaa tgacttgtgc tgcaatcgta atatctgctg
     7861 ctacagttac tacccagtta aaccaatagt tccagccaag cgcaaatcct aaagatggat
     7921 caacaaatct tgtagcatat gtactaaatg aacctgatac tggcaaatac gtagccattt
     7981 cgccaagtga cgtcattaag aaaaatacca ttattccgat aattgcgtat cctattaatg
     8041 cacccaaagc acctgcatca tgaattgctc caccagaagt tacaaataaa cctgtaccaa
     8101 tacaaccccc aatcgcaatc atagaaatat gacgatcttt aagtcccctt ttgacaacat
     8161 tgttactttc attttgaact tttgacatat aagctccctt tccatgtttt agaggccaag
     8221 aaataaataa cctttattca ctttcatacc cttttttaca gaacatagtg atattaaaag
     8281 taaaaaagtg gctacatacc tttaagatat gcaaccactt tggcaattat ctatataagg
     8341 tagcacatca cattctgtga cagtacagtt cctattcgaa aactgtccca atagatataa
     8401 tttatggttt atatctattt cggcatcttt acctttcact tgttcaactt atgtaccata
     8461 aatacttctg acaagttact aattaaacat gcaacctcta actcaattta atattttaac
     8521 taacttgtaa tatacaggat tcatcacgca taatcaaccc tgtgaaactt gatacgcaat
     8581 aaaaatttca aagcatttta ttgcgacaac tgtctatcta tgttttttta aacgaatttc
     8641 atcaactaga ttccagataa attcatcttt ttcaactgtt tcttggtctt gcgatccata
     8701 ttgacgcaca ttcacttgat tattttcaac ttccttatcc ccaactacga tttgataagg
     8761 tattttttgc atttgagctt ctctaatttt ataacccatt ttttcattac ggtcatcaat
     8821 acttacacga acgccttgag atttcaattc atcttgtaat tggcgcgcat aatcataatg
     8881 taaatcaacg ttaactggaa tgatttgaac ttgttttggc gctaaccaag ttgggaatgc
     8941 acctttagtt tcttcagtta aaaatgctac aaatcgttcc attgttgata caacaccacg
     9001 atgaataaca actggacgat gatgttcacc atcttgacca atataagtta aatcaaaacg
     9061 ttctggtaat aagaaatcaa gttgtgctgt tgataatgtc tcttctttac ccatcgctgt
     9121 tttaacttga acatctagtt tcggaccata gaatgccgct tcaccaatcg cttcttcgta
     9181 cgataagcca agctcatccg ctgcctcttt aagcatattt tcagctttat tccacatatc
     9241 atcatcatca aagtactttt ctttatcttc agggtctcta taacttaatc taaagctata
     9301 atcctcgaaa ccaaagtctt tatacacatc aataatcatg tttacaacgc gtttgaattc
     9361 ttctttaatt tgatcaggtc gaacaaagat atgtgaatca tttaaagtca taccacgaac
     9421 acgttgtaat cctgatacag caccacttgc ttcatatcta tgcatcgttc ctagctcagc
     9481 gatacggata ggtaattcac gatatgaatg tggtttattc gcataaatca tcatatgatg
     9541 tggacagttc attggacgta ataccataga ttctgtttca tctaactgca ttggtgggaa
     9601 catatcttct tgatagtgat cccagtgacc agatgttttg tataaatcaa cattagcaag
     9661 tactggtgta taaacgtggt catatcccat gctaacttct ttatcaacaa tgtaacgttc
     9721 aatttcacgt ctaattgttg caccgttagg taaccataat ggcaaaccag caccaactaa
     9781 ttggctattt gtgaatagtt ctaactcttt accaatttta cgatgatcac gttctttacg
     9841 ctcttctaac atttgtaaat gtgcttttaa ttctttttta tcaaagaaag cagtaccgta
     9901 tatacgttgt aacattttgt tgttactatc tccacgccag tatgcacctg ctgtagataa
     9961 tagtttaaac tctttaattt tagctgttga tggaacgtga acgccacgac ataaatcagt
    10021 aaaatcacct tgactatata atgttacatt ttcatcttca ggaatcgcgt cgattaattc
    10081 taatttgtat tcatcattgc tgaataactc tttcgcttca tctcgtgaaa ccacttttcg
    10141 ttcgattttc atattttcgt taacaatttg tttcattgtt ttttcaattt gttcaaagtc
    10201 atcagatgag atgttttggt caatgtcgaa gtcatagtag aatccacctt ctattacagg
    10261 acctacacca aatttaacat taccatataa ccttttaatc gcgtgtgcca ttaaatgtgc
    10321 agtagaatga cgtaatacct ctaacgcttc ttcactacct ggtgtcacaa tttcaattga
    10381 tccatcagtt tcaagcggtt tagttaaatc tacaagttgc ccgttaaatt tgccggcaac
    10441 agctttttta cgtaatccag gactaattga ttgtgctata tcttcagtag tagtaccttt
    10501 atcaaacgcc tttttattac catctggaaa ttgaatatta atttgttcca tgttaaaccc
    10561 tcctatttgc tttataaata cttttatctg atctcgttaa aaaattgaac aacaatcatc
    10621 gttttaacat taaacctatt aacaataaac agggaattta tgaaaccaac gaacattttt
    10681 gtctgaaaaa aacaaaaaat cccgccccta tacaagggac gagatcgtcg tggtaccacc
    10741 ctagttattt aatacaattt atgtattaaa tatctctgct taagataacg gtcttgatcc
    10801 gggtattcat tacaaatacc ataaatgaag tagtaatcac ctaatttatt aaccatattc
    10861 tcatcaaaca atggctttct gtgtaatatt gattagatca tcttgtcttc aatcatttaa
    10921 acgatttaga tttgtattca ttatacacca atcattttaa aattcaattg tttctgaaat
    10981 tttctcctga taaaaagtat ggtgttgaca aagatttgac acgttcaata atacgtgctg
    11041 ctttagtctt ctcttcacca tcacgagtca tcgctaaatg atgttccaat tcactatagt
    11101 caaaattaga actaaagaat gttggtaatt catgaaccat tcgataatgt agcaaaggtc
    11161 caattacctc atctctcacc catggagtca cttcttcagc cccaatatca tcaagcatta
    11221 aaatgtttgc ttctcttacg cgatgtaatt tcttttcaaa agaaccatct ttaaagccac
    11281 cttttaatgt tctaataaat tccggtaaat aaataattgt cgaacgtacc ttcttagatt
    11341 tgagctgatt cgcaattgca cctagaataa aagatttacc tgtcccaaat ggaccataaa
    11401 ggtaaaggcc tttcacttgt tccccattag ttattgctgt acaaatatca tctgctgcca
    11461 tagctacatc aagacggtct cgatgattca tataaatatc tttcaatttg gcatttaaag
    11521 tatctcgttg catatgatga gatgtaatta gctcagcttc aaagcgttct tcgtcgtact
    11581 tgattttaca tgggcattgt aaatagcgta ttttaattcg gttattatca acatataact
    11641 caggcacatg cccctttacg aaatttggac aatcagcaaa tttatgaccg tcataatgtt
    11701 tttgttgatc tttatactct tgtaacacat ttaagtcttc atcaatcata gcattcgtta
    11761 attcagctcg atgcgcttcc aaaaattgct taacatctgg gtcattgatt acttcttttt
    11821 ttatcttttc tattcttttt tcaaagtcct gcgacgtgtt aattatactt ttaaattgct
    11881 tcattattga ctgtcctcct cccatttttt agataattta tctagaaatg cttgtcgatc
    11941 ttgctctaat tgttgatcat ctacgctatt atctttagcc gaatcttctt cactaggttt
    12001 atctctattt tctaaccatt taggtgtttt ttcttttgaa atacgattac gctgcccata
    12061 gtatgaacca cgcttttggt aatttccgct agaaccctca tttttaggtt gattaacttt
    12121 tttagcgtaa ttatatgctt ctttagctgt cttaatacct tttttcttcc aatttgatgc
    12181 tatttccaaa atatacgctt taggaagttt catatcttct tttaacatga caaattgcaa
    12241 caaaatatta atgacgccaa aagacatttt ttcacgttca attaattctt caaccattgt
    12301 cttttgcgat atagttggtt ctgattcaga ccaagaagct aacatatcaa ttggactcgt
    12361 ttgttcaagt aactcaaacc attcatcact ttgtggcttt ggattcactt ctgaagattt
    12421 gcccgtcgaa gatgatgtaa caggagattt cacctgtaat ttaggcattt gattttcgtg
    12481 ttccattaag taatacgagc gtgcttgttt acgcatttct tcaaaggata actgttgtcc
    12541 acttgtaatt gaatttaaaa taacatgctt catgccatct gctgttaaac catataaagt
    12601 cgcgagttgt gtaattaaac gctttgcatc tttggtaaca atgtcttgac taataaaatg
    12661 tttacctaac atttgtctca acatttcaaa gtcaaaagat tcatttgata aatcgatacc
    12721 ttggtacggt tcattaatcg gaatatcact tgtatcgata tctatttttg tagacggcac
    12781 tttaaaaaca tcagtaaatt gtcttgttac ctgtttaaat tcactcaaat caatttgttg
    12841 atactcaaag tatttcttca actcatgaaa tcgacgatgc tcgacttcac tatataaaaa
    12901 gattgacaac attggatcat taaaaaataa atgtgctgaa ggcggttgaa ttaattggta
    12961 aacaaattgt gtttcttgtt catcatgttt gacaaacgcc tttaacaatc caatcgcttc
    13021 aagtaagtcc atttgttgtc taaactctag taaattaatt ttaagttcat tcataaaaat
    13081 ataatgagaa agaatcaatg tttcattatg actttcttta acgaattgtg tcataaaatg
    13141 gtataaaccc actgcttgtg ttccaattag cggtgtatac agtcgattca atacctctaa
    13201 atgattcgta tttaaatcaa agtgttgcat aactttgaat tgatcctttg gtcttaagcc
    13261 gaattcgaag gcttgtcgtc ccatttaagc atcactccgt ttgttttcgc ttaaaatccc
    13321 ttgcatcgat gctaacaatt gatcaacatc tttaaattct ttatagactg atgcaaatct
    13381 aacatatgaa acttgatcaa catgcattaa caagttcata acgtgttcac ctatatctcg
    13441 tgaagacact tccgtatgac cttcatctcg taattgccat tcaaccttgt tagttatgtc
    13501 ttcaagttgt tgatatctaa ctggtcgttt ctcacaagaa cgcacaagtc cattaagtat
    13561 cttttctctt gaaaactgct ctcttgtgcc atcttttttc acaactataa gctgactaac
    13621 ttcgatatgt tcaaatgtag tgaaacgtgt tccacaattt tcacattctc ttcgtcttcg
    13681 aatggcattt aattcatcgg catgccttga atctacaact ttagattgtg tagaattaca
    13741 tttcgggcat ttcattacat caccctcttt attttgatta tgcctaatta tactataaat
    13801 ctagagatga aaaaagaatc cctcaattta attcatttaa ccaaataatg aaacaataaa
    13861 aaacattata tcgttactta ttaagtaata tgcatgacaa tattattgta ttaaaaataa
    13921 aaaacctaac tccgaagtca gagtcaggct attaaataat tgtattaact tgcacttaca
    13981 gtttcttttg atgtcaaaag tgctccaatt tgctcagcaa catctacaac tctatttgaa
    14041 taaccccatt cattatcata ccaagcaata acttttactt tattccctga catgaccatt
    14101 gttgattttg catcaataat agctgaatgt ggattagtat tgaaatcaac agacactagt
    14161 ggttgatgtt cgacttctat gataccttct aaaccagcat tttcaaaagc ttggtttact
    14221 tcttctgccg ttacttcttt ttctaaatca acaactaaat caacgagcga tacattcttt
    14281 gttggtacac gtaatgccat gccgtgtaat ttaccttcta attctggcaa tacttctttt
    14341 aaagctttcg ccgcaccagt agaagtagga ataatgcttt cattacatga gcgtgcacgt
    14401 cttaaatctt tatgtggatt atcaatattt ttttggtcat ttgtaatagc gtgaacagta
    14461 gtcattaaac cattaactat tccaaactga ttatttaaaa cttttgcaac tggaccaatg
    14521 caattagtag tacatgaagc attactaaaa atgtcaaatg cttctatatc taattggtca
    14581 tcatttacgc ctttaactac catttgaaca tgtccacctt ttgaaggacc agttaacaat
    14641 acttttttgg cacctgcttt aatatgtgcg atggctttat caccatgatt aaatttacca
    14701 gttgcatcta tagcaatatc gatatctaat tctttccatg gcaagttttc aggattgcga
    14761 tcagcaacca atttaatttt atgatcacca acttgcaatc cgttttcaat tggttctact
    14821 tttagattat attttccatg tgttgtatcg taattgatta aatgtgcaat tgtttcgggt
    14881 ggataactag cattaatcgc tactacattt aaatttttat tttgtaatgc aatacgtaat
    14941 accattcttc caattctacc cataccatta attgcaatat tcgttgacat taaaagcacc
    15001 ccttgatttt tatgtgttat actttatgga attagtatag catattatat gaaatttgaa
    15061 agcgttttcc gtcgatttat ttatcttttt tataaaaaat agtcattact tacatacatc
    15121 aacccgtacg taaagtaatg acttatttat agtgtaatat taatcttctt ctccgtaatt
    15181 cggcttttca atataacctt cttcttctaa caatctctca aggttttgtt ttaattcaag
    15241 tttatcccct aaattatcga taacatgatc ggccattcgg ctttttttat caatagaaat
    15301 ttggctatag acacgagctt tcgcatcttc taatgacaaa ttattacgtt gcattaaacg
    15361 atccatttgt atactttcag aagtgtatac aacccacact tcgtctactg tattttccaa
    15421 ttcattttca aataataatg gaatatccat gattacatta tatccttgtt ttaaatattc
    15481 ttgcttttct tcttccataa tatctcgcac gataggatgt atgatagcat ttaattctaa
    15541 gcgtttttct ggatggttaa acactaaatc acccatataa cgacgattca tctcgccatt
    15601 ttcatcaatt gcttcatcac caaagacttc tcgtacttga gctaaacctt tactcccctt
    15661 tttaacagct tccctggctg ctttatcagc atctactact ttaaaaccga atacggataa
    15721 gagttctgat actgttgatt ttcctgaggc gattccacct gttagaccaa taactttcgg
    15781 cataatttca ctctttcttt atttttgaca tactggacaa taatgactat ttcttgtcgc
    15841 gatgattttt gtttcaattt gacttccaca cactttgcat accggctgct tatatacatt
    15901 aagatgcaat tgcatctcac cagtttttcc atcagcatga cgataatctg aaatacttgt
    15961 accgccatat ttaatacctt cttctagtac ttctctaaca taataaaaaa ccatttcttg
    16021 ttgttggtgt gttaagtctt ttactttttt atctggtaaa acacctgcac gaaacaacgc
    16081 ttcacatgcg taaatatttc cacaacctgc gattacttta tgatccaaaa tcacttgttt
    16141 gattggttta ttcttattag actgttgatg aattcgattt aaataatacg tcaatgcttc
    16201 atttgaaaaa ggttcaggcg ctatttctaa aaatgaaggg taagatgcta cagacgcaac
    16261 atttctaatt tctccaaaac gccgtatatc tgaataaatt aactttttgt catttgacaa
    16321 ctcaaaaata acatgccaat gcttacgata attaggtatc ataatatctt caagttcatc
    16381 tacaatgaaa aaaccacccg ccatacctaa atgactaatt aatgtacgtt gttctcgttt
    16441 attatctagc tgaaaaacga tatatttact tcttcgttct acatttgtaa tggtatagcc
    16501 ttccgataaa gttttaaaag tatctaattc aattcctttt ataattgttt ccttgccttg
    16561 agctttacct tcaattactt tatccgaaaa tttaacgtgt tcaatttttt gatttataac
    16621 gtagggttca attcctcttt ttacatgttc tacttctggt aattcgggca taccattaac
    16681 ctcactttat tttgcatcat accaagttgc accataactt gagtctactt ttaatggaac
    16741 atctaattgc aatgcatttt ccattatctc ttctacaaat tcactaaatg aatctacttc
    16801 tgacttaggt acttcaaaaa ttaattcatc gtgtacttgt aataatagtt tagcttgata
    16861 tgttgtctct ttcatttttt gtgcaaattt aaccattgcc agtttaatga tatctgcagc
    16921 actgccttgt attggcgtat tcatagcagt acgttcagca aagccgcgta aattaaagtt
    16981 acgactcgta atatcaggaa tatagcgtcg acgatgtagc aatgtttcca cataacctaa
    17041 agctttggca tcttttacaa tatcagacat atattgtttt acacctggga aactagctaa
    17101 ataatcatca atgaatgctt ttgctttttt acgagtaata cctaaacttt gacttaaacc
    17161 ataatcactt atcccataaa caattccaaa gttaaccgct tttgcttgac gacgcattaa
    17221 actatcgact tgatcagctt ctacaccaaa tactttcata gcagttgctg tatgaatatc
    17281 atcgccgttg ataaatgctt ctttcatact ctcatcttgt gtaatgtgtg ctaatacacg
    17341 caattcaatt tgagaataat ctgctgataa tataacgcta tcttttgaag ttggtttaaa
    17401 ggcttttctt attttacgcc cttcttcaag tctaaccgga atattttgta aattaggatc
    17461 tacacttgat aaacgtccag tttgcgctaa agtttggtta aaacgtgtat ggatacgttg
    17521 atcatcacta attacctttt gcaatccttc aacataagta gactgtaact tagataattg
    17581 acgatattct aaaatataat caatgatagg atgttcacct tgcaattgct ctaagacatc
    17641 tacagcagta gaatatcctg ttttcgtctt tttaataaca ggtaattgta atgtctcaaa
    17701 caatacaaca cctaattgct taggagaatt tatattaaaa tcttcaccag ctgcatcatg
    17761 gatatttcga atcaagacgt ctaatttttc ttgaatttct ttttccattt cttctaaatc
    17821 atgaacatct gtaaatatac caatttcttc catttcactt aaaatcttag ctagcggtag
    17881 ctctaaatca gctaagagtt ctacctgatt gtattcttct aattgtttat ccatatttgg
    17941 tttcgcaaag taaattgcat cagtaataga agcaacatat ggatttaaaa catcatcttc
    18001 aggtacctta aatttcttac cttttccata tatactcaca tcgtctttca caaaactttg
    18061 accgtacaat gaaacaactg attgaacatc actaatcgta cgagatggat caattatata
    18121 actggccaac ataatatcga aagaaatatt ttgaatatca attcccaatc tatgtgatgc
    18181 tacatatgtt tttttagcat catatacgac ttttttcgta ttcggatttt ctaaccatga
    18241 aactagttcg gcataattat ttatgtcatc cgcattaatt acaatatgtt tctcacctgt
    18301 aaataaagag aattttaaaa tattatttcg caaatagtta ccaccgtcta attcgaaatg
    18361 gatggccgct tctttcaatg aagtaaaatc aacattatca aaagacgttt caatttcaat
    18421 tgtcttttct attgcatctt caacgcttgc tgattgatca atgtcagcca acaattgttt
    18481 gaattctaac ttcttaaaca attcgatttt ttcttgttgt tcatcttgat gagtcattaa
    18541 cgtatcttca agttttactt caatcggact atctacatta atcgttgcta attctttact
    18601 cattaatgca tcttctttgc tattttgaag tttctctttt aactttttac ctgaaatttc
    18661 atctaaatgt tcatagacac cttctactgt gtcaaattgg tttagcaatt ttattgctgt
    18721 tttctctcca acacctgcaa cacctggtat attatcagaa gtatctccca ttaatccttt
    18781 catatcaata atttgattag gtgttaaccc gttgtatttt tccgcaataa agtcaggtgt
    18841 ataatgatca acatcagtaa cacctttttt agtgtaataa atggttacat tatccgttgc
    18901 aagttgtgtt aaatctcggt ctcccgtaat aataattgtc tgaaagcccg ctttatctgc
    18961 ttctttactt aaagttccga taatatcatc tgcctcatag ttatctaatt cataacgttt
    19021 aatatgatat gcatctaata attggcgtat ataaggaaat tgctcactta gttcaggcgg
    19081 cgttttctgg cgtccacctt tatattcact atatttttca tgtctgaaag tcgttttacc
    19141 tgcatcaaac gctactaaaa aatgatttgg cttttcttct tttaaaatct tctctagtaa
    19201 cattgcaaaa ccatatactg cattggtatg aatgcctgct ttgtttgata acaaaggtaa
    19261 tgcataaaaa gctctaaaac ttaagctatt accatcgatt aatactaatt tattcacaat
    19321 tttaacctcc agaactaatt tatatatatt ttagcatatt cgactgtgat gtcgtaatta
    19381 aagaaactat ctcatagagt atttatacac gacctaattt caaataaaac aagtgactat
    19441 atagactaag ctaaaaaata aaaatgacat aatcatgatt gttcttgatt agcactccat
    19501 aaagtcaggt taaaagtcca acttttgaga tgcacattat catttcatga ttatgtctac
    19561 tttttaatat ttttatgctg ctattttaaa tttttatagg taagaataag ttatgaatcg
    19621 tcagaaccaa atggaatata tttaactttg gtcattttcg gtaattcttc ataattatta
    19681 aaccactctt ggtaattttt attgattggt gacggatgat gcatataatg ttcaaacggc
    19741 aatgattcca ctgtataaac ctcttgtcgt ggatgatctt taatttgttg ttttaataac
    19801 tgaactcttt tttcatgttc ataatgaaca taaataaatg cactaagata tatcatagct
    19861 aaaactagtg atgcaacttt aataaaatta acattgattg acttatattt ccgaaattct
    19921 tttaataaaa taattaaaat gattacatgt atcgtataaa caatcaaaaa attacctggt
    19981 tctattggag taacaatgac tagtgtcgac gccgaaacac atattgcaat aagtaaggaa
    20041 tataaagtga tttgtgtttt acgatcatta atagacaaat aaatacctac aaatatcgaa
    20101 aacgcaaagt aaccacatac aattacgttc acaaaaccaa ccaatccaat atctgtattt
    20161 ttatttaata aaaactgatt gtaaaatagt aaataataaa gcggtaaagt gataaatcct
    20221 atcataatga tacgacgctt taatattgtt aaatgtacat accgatcact tctaagcagt
    20281 agataaataa taagcgctgc aatcatactt aaaattataa tctgactgaa aatgacacca
    20341 tatggaagtg acgttgatat catttctgca aattttgaaa agataccttg attatttgaa
    20401 acttgttgat attctgatcc ttcaaataaa attttgcgat aatttggatt ggaaaacata
    20461 atgattgtac ctatagtagc aatcataaat gaaaacaata atttataatt aagtgttcga
    20521 tttgcagtaa attcatacag aaaagctaaa attaaaatga tacagtggaa taatgtcaca
    20581 ttctccataa ataattgacc gaagaagcat aaaacataga atagtacagt aacacttacc
    20641 ggctgctttt ctttatatat aattgcatta atacaataat aaataataaa gagtgaaatt
    20701 agtgttgatg tcgcataatt ataaaatcct gcaaaccagc catatgtatc tgcataaata
    20761 gcacttggta aaattaacat taaagaaaat gctaacaaat aatagcttgt ccacgcttta
    20821 caacgtgtaa tgtgcataat catccaaatg atgcccatac taatgagacc atatgaaagc
    20881 caacgtaacc agcttacatg tacagctata atttcaaaga tatttccgat atagcgacca
    20941 ttaagtgatg caaatcctac ttttaaaata tcagtattat aattgctaaa ccattgtaaa
    21001 tcatcgtgca tgagtggtag taagataccc ataaaagtat aaaacaa
//
LOCUS       DAKPJH010000041        20847 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.041, whole genome shotgun sequence.
ACCESSION   DAKPJH010000041 DAKPJH010000000
VERSION     DAKPJH010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20847
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.041"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            117..1250
                     /locus_tag="OY092_001258"
     CDS             117..1250
                     /locus_tag="OY092_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HCX1076209.1"
                     /translation="MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKE
                     DEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKAIVKEDGYIYSD
                     GTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
                     DFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKL
                     GQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVEHMTDVFETTASE
                     LGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGI
                     PSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK"
     gene            1318..2724
                     /gene="gndA"
                     /locus_tag="OY092_001259"
     CDS             1318..2724
                     /gene="gndA"
                     /locus_tag="OY092_001259"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HCX1076210.1"
                     /translation="MTQQIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEE
                     SKGKNIHPTYSLEEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNT
                     NYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAA
                     KAKDGASCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEDIAQTF
                     KDWNAGELESYLIEITGDIFMKLDENKEALVEKILDTAGQKGTGKWTSINALELGIPL
                     TIITESVFARFISSIKEERVNASKELNGPKASFDGDKKDFLEKIRKALYMSKICSYAQ
                     GFAQMRKASEDNEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNPGLQNLLLDPYF
                     KNIVTEYQDALRDVVATGVQNGVPTPGFSSSINYYDSYRAADLPANLIQAQRDYFGAH
                     TYERKDKEGVFHTQWIEE"
     gene            2943..3314
                     /locus_tag="OY092_001260"
     CDS             2943..3314
                     /locus_tag="OY092_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076211.1"
                     /translation="MEKLNQVMLYVDDVDKAKAFWTETLEFVVVSETPLAEDYVAVEV
                     SPTKDAETSLTIMAKEFIEKYSPEVNLGTPSLMFKEKNFDALYSKLNDLGLTGHDIVE
                     MNGQRAFNFQDGQGNYFAVSD"
     gene            3253..3489
                     /locus_tag="OY092_001261"
     CDS             3253..3489
                     /locus_tag="OY092_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076212.1"
                     /translation="MVNVHLISKMAKVTILQLVTKQSILIFIQTFILIFGLNFSMKVL
                     FLSFYAIVCTNLLTFLESVTKLVLYNGWKRFPAQ"
     gene            3508..4527
                     /locus_tag="OY092_001262"
     CDS             3508..4527
                     /locus_tag="OY092_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCX1076213.1"
                     /translation="MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELN
                     YFPNTAARTLITNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVS
                     NNLNDLMDEVYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQF
                     THIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIKGFETIASQNKINYQI
                     IETSNEREVIFNYMQNLHTRLKDPNIKQAIISLDAVLHLAILSVLYELNIEIPKDVMT
                     ATFNDSYLTEIASPPQTSIDIEPRMLGQQAGAAILNILKNKAQDVIELVIIDTELKIR
                     KSTQR"
     gene            4543..6192
                     /locus_tag="OY092_001263"
     CDS             4543..6192
                     /locus_tag="OY092_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HCX1076214.1"
                     /translation="MNKQWWKEAVAYQVYPRSFNDSNHDGIGDLPGMIDKLDYLKDLG
                     IDVIWLSPMFKSPNDDNGYDISDYQEIMDEFGTMEDFDRLLKGVHDRGMKLILDLVVN
                     HTSDEHPWFIESKSSKDNPKRDWYIWQDPKPDGSEPNNWESIFNGSTWEYDANTEQYY
                     FHLFSKKQPDLNWANPEVRDAVFEMMNWWFDKGIDGFRVDAITHIKKTFEAGDLPVPE
                     DKTYAPAFDVDMNQPGIQTWLQEMKDRSLSKYDIMTVGEANGVSPDDADDWVGEENGK
                     FNMIFQFEHLGLWNSGDSHFDVNSYKSVLNRWQKQLENKGWNALFIENHDQPRRVSTW
                     GDDDKYWYESATSHAAVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKNDYQIV
                     KAQGGDVDALLAKYKDENRDNSRTPMQWDDTLNGGFTNGEPWFPVNPNYKTINVAQQL
                     EDEHSVLQFYKDLIQLRKSNDVYVYGQFDLVDAENSQVFAYTRTLNEKQVLIVGNLTN
                     HEAELTVPFDLSHGEVKLFNYDAKVNLKQLRPYEACVIELN"
     gene            complement(6274..7140)
                     /locus_tag="OY092_001264"
     CDS             complement(6274..7140)
                     /locus_tag="OY092_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCX1076215.1"
                     /translation="MDVIKQIQQAIVYIEDRLLEPFNLQELSDYVGLSPYHLDQSFKM
                     IVGLSPEAYARARKMTLAANDVINGATRLVDIAKKYHYANSNDFANDFSDFHGVSPIQ
                     ASTKKDELQIQERLYIKLSTTERAPYPYRLEETDDISLVGYARFIDTKYLSHPFNVPD
                     FLEDLLIDGKIKELRRYNDVSPFELFVISCPLENGLEIFVGVPSERYPAHLESRFLPG
                     KHCAKFNLQGEIDYATNEAWYYIESSLQLTLPYERNDLYVEVYPLDISFNDPFTKIQL
                     WIPVKQSPYDED"
     gene            complement(7370..8854)
                     /locus_tag="OY092_001265"
     CDS             complement(7370..8854)
                     /locus_tag="OY092_001265"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HCX1076216.1"
                     /translation="MSTKNKHIPCLITIFGATGDLSHRKLFPSIFHLYQQDNLDEHIA
                     IIGIGRRDITNDDFRNQVKSSIQKHVKDTNKIDAFMEHVFYHRHDVSNEESYQELLDF
                     SNELDSQFELKGNRLFYLAMAPQFFGVISDYLKSSGLTDTKGFKRLVIEKPFGSDLKS
                     AEALNNQIRKSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQVTS
                     SEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLNSEDIRAEKVKVLKSL
                     RHFQSEDVKKNFVRGQYGEGYIDGKQVKAYRDEDRVADDSNTPTFVSGKLTIDNFRWA
                     GVPFYIRTGKRMKSKTIQVVVEFKEVPMNLYYETDKLLDSNLLVINIQPNEGVSLHLN
                     AKKNTQGIETEPVQLSYSMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKF
                     VDAIQDEWNMVDPEFPNYESGTNGPLESDLLLARDGNHWWDDIQ"
     gene            9167..10087
                     /gene="rnz"
                     /locus_tag="OY092_001266"
     CDS             9167..10087
                     /gene="rnz"
                     /locus_tag="OY092_001266"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HCX1076217.1"
                     /translation="MEVTFFGTSAGLPTKERNTQAIALNLEPYSNSIWLFDVGEGTQH
                     QILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE
                     MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTIN
                     VEALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNE
                     RVISRDADVMVHEATYIDGEKHLANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNT
                     EDINEIYQTLIQNEDTPNFNFVKDFDSFKV"
     gene            complement(10190..11005)
                     /gene="proC"
                     /locus_tag="OY092_001267"
     CDS             complement(10190..11005)
                     /gene="proC"
                     /locus_tag="OY092_001267"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HCX1076218.1"
                     /translation="MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAF
                     AEKLGVNYSYDDATLLKDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPID
                     YIKQQLECQNPVARIMPNTNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVS
                     EDHLHQVTAITGSGPAFLYHVFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSD
                     LSMAQLRKNITSKGGTTQAGLDTLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ"
     gene            11147..11902
                     /locus_tag="OY092_001268"
     CDS             11147..11902
                     /locus_tag="OY092_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1076219.1"
                     /translation="MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIF
                     EQELGKTINVIPCDLNDLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIET
                     YQLNLISFNVLYTVLRPYLTSNAHIIGISSQAAFSTQANAAHYGASKAGFYALMNALR
                     LESPNIHIMTVNVGPIDTPFHQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLE
                     INRPKWMHHALKMYQIAPRFFERCFPKLFKNKA"
     gene            11918..12166
                     /locus_tag="OY092_001269"
     CDS             11918..12166
                     /locus_tag="OY092_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076220.1"
                     /translation="MNCQSESVVRLCVRYAEQLSVFEEFTVLDILGDISVDQISDSTL
                     YYTCEKFKLLVLQGNVLGVQIITNNDESTCEVKYRKMF"
     gene            complement(12382..13290)
                     /locus_tag="OY092_001270"
     CDS             complement(12382..13290)
                     /locus_tag="OY092_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCX1076221.1"
                     /translation="MQKNILKSGISLSELGLGCMSLGTDLKKAEQIIDCAVENGITYF
                     DTADMYDKGINESVVGKALLKYQQRDDIVIGTKVGNRLTKDGSTTWDPSKSYIKEAVK
                     GSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRPNVIDYYL
                     KHSQIETIMSQFNLIDNRPESLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKD
                     GIFDYSHDELGETIASIKEIESNLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENY
                     HTKVSLDQIKTARARVKDLEYTNHLV"
     gene            13372..13914
                     /locus_tag="OY092_001271"
     CDS             13372..13914
                     /locus_tag="OY092_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HCX1076222.1"
                     /translation="MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGA
                     VAVCAVTPKKEVVLVKQYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKE
                     LTHVVDMYGSPGFCDEQLSIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEI
                     EDAKTIIALQHLLLNYNHSK"
     gene            14019..14468
                     /locus_tag="OY092_001272"
     CDS             14019..14468
                     /locus_tag="OY092_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HCX1076223.1"
                     /translation="MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVY
                     LKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCME
                     CGRVDEIDEDLLPEVENRVENEFNFKILDHRLTFHGVCETCQAKGKG"
     gene            14517..15404
                     /gene="xerD"
                     /locus_tag="OY092_001273"
     CDS             14517..15404
                     /gene="xerD"
                     /locus_tag="OY092_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HCX1076224.1"
                     /translation="METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISH
                     IDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSFHQFAIREKYAAKDPTVLLDSPK
                     YDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL
                     IMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTITEVLFLNMHGKPLSR
                     QAIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLY
                     THVSKSQIRKMYNQFHPRA"
     gene            complement(15482..15988)
                     /locus_tag="OY092_001274"
     CDS             complement(15482..15988)
                     /locus_tag="OY092_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HCX1076225.1"
                     /translation="MQQALINFYYQFHTKQHYFLCHDILEDAWKAENNYSKQDAVVSL
                     ILFATACYHYRRNNLKGAYKSFNKSKEIIQNAKDRDALYLNLNDYQLLIEQQIAKLNA
                     AKPFSSVILPITPVFERIIKANYPDYDYNQETATDPFIVDHHMRRDRSEVIAAKEEAI
                     QLRKHRRN"
     gene            16080..16811
                     /locus_tag="OY092_001275"
     CDS             16080..16811
                     /locus_tag="OY092_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HCX1076226.1"
                     /translation="MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVH
                     AMKQLEINIASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKE
                     YTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNT
                     PKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKA
                     GIINIEQQRNFEDINIIRGVNYHFG"
     gene            16804..17346
                     /gene="scpB"
                     /locus_tag="OY092_001276"
     CDS             16804..17346
                     /gene="scpB"
                     /locus_tag="OY092_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HCX1076227.1"
                     /translation="MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSS
                     HGLMIQRFGTTYVLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDI
                     ELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEED
                     DEEMDAFFSNLVNQKGENND"
     gene            17339..18076
                     /locus_tag="OY092_001277"
     CDS             17339..18076
                     /locus_tag="OY092_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HCX1076228.1"
                     /translation="MTKELERLQKRIANSGYTSRRKAETLISEGKVKVNGTTVTELGT
                     KVKPSDTIEVEGIKIELEDKIYILFHKPTQVITSVSDDRGRTVVTDYFKDIEARIYPV
                     GRLDYDTSGLLLLTNDGEFTNLMTHPRYQIKKKYVAKLKGYLMREEVKALEKGIELED
                     GMTQPAEVKVKKQDKDKNTTLVEITITEGRNRQVRRMFEHFGHQVTKLSRIEYGPLNV
                     VGLNAGEGRVLTPHEVKVMRHLAEHGK"
     gene            18209..18934
                     /gene="srrA"
                     /locus_tag="OY092_001278"
     CDS             18209..18934
                     /gene="srrA"
                     /locus_tag="OY092_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator SrrA"
                     /protein_id="HCX1076229.1"
                     /translation="MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME
                     NNYACILLDLMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVK
                     PFSPREVVLRVKALLRRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLT
                     PKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAA
                     HMIQTVWGVGYKFEVKSNDEPAK"
     gene            18915..20666
                     /gene="srrB"
                     /locus_tag="OY092_001279"
     CDS             18915..20666
                     /gene="srrB"
                     /locus_tag="OY092_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SrrB"
                     /protein_id="HCX1076230.1"
                     /translation="MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETE
                     NAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQM
                     LNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIY
                     KDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDY
                     SYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKSIRDSLINSMVEGVLGINESR
                     QIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDK
                     IEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTE
                     PDEIKESLAIVLDESKRLNRLVNELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQ
                     QADDLGLNMTFNYCKKRVWSYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENKSED
                     ILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVK
                     SELGKGTTFIIKLPKPE"
BASE COUNT         7335 a         3004 c         3834 g         6674 t
ORIGIN      
        1 atatgacaca atttacaagc ctgataaatc tgtgtaacgt caattactgt aacattttat
       61 ttcatcaatt tttaccgttt ggcgtacttg aaaattttga taaaaggggt tccattatga
      121 ttaatgagca aagattactt aatacgtttt tagaacttgt acaaatcgat tctgagacag
      181 ggaatgaatc aacaatccaa cctattttaa aagaaaaatt catagcatta gggttagatg
      241 ttaaagaaga tgaagcggct aaacatccta aattaggtgc caataatcta gtgtgtacaa
      301 tgaatagtac tatcgaagaa ggcgaagtac ctaaattata tttgacgagc catatggata
      361 ctgttgtacc cgcaattaat gtaaaggcaa ttgtaaaaga agacggctac atatactctg
      421 atggtacgac tattctaggt gcagatgata aagcaggatt agcagcgatg cttgaagttt
      481 tgcaagtgat taaggaacaa caaatcccac atggacaaat tcaatttgtg attactgttg
      541 gagaagaatc aggtttaatt ggtgctaaag aattaaattc agagttgttg gacgcggact
      601 ttggttatgc tattgatgca agtgctgatg tcggcactac ggttgtaggt gcaccgacgc
      661 aaatgttaat ttcagctaaa attattggca aaacagctca tgcaagtacg ccaaaagagg
      721 gtgttagtgc tattaatatt gcggcgaaag caattagtcg aatgaaatta ggacaagttg
      781 atgaaataac tactgccaat attggtaagt ttcatggcgg ttcagctacg aatattgttg
      841 cagatgaagt cattttagaa gcagaggcac gttctcacga tccagaaaga ataaaaacac
      901 aagtcgaaca tatgactgat gtgtttgaaa ctactgcatc agaattaggt gggaaagcag
      961 aagttacagt ggagcaaagt tatccaggat ttaaaattaa tgataatgaa gcggttgtta
     1021 aaattgcaca agaaagtgct cgtaatttag gattatctgc aaatacaatt atttctggtg
     1081 gcggttcaga cggcagtatt attaatacat ttggtattcc ttcagtcatt ttaggagtgg
     1141 gttatgaaaa aatccataca acaaatgaga gaatgccgat taaatcattg aacttgcttg
     1201 caagtcaagt gttagaaata atcaaaatag ttgcgcgaca atcgaaatga tttagtgtag
     1261 tgtatgtcta ttttgtgata caatactaat gaaaaatcaa caagtgaggt aagtaatatg
     1321 acacaacaaa ttggagttat tggtttagcc gttatgggta aaaacctagc ttggaatatt
     1381 gaatcacgcg gatatagtgt atctgtattt aaccgctcaa gtgaaaaaac tgatttaatg
     1441 gttgaagaat caaaagggaa aaatattcat ccaacgtatt cattggaaga atttgttaat
     1501 tctttagaaa aaccacgtaa aattttatta atggttcaag caggtaaagc tacggatgca
     1561 acgattgata gtttgttacc tttattagat gatggagata ttttaattga tggtggtaat
     1621 acaaactatc aagatactat cagacgtaat aaagcattag cacaaagtgc aatcaacttt
     1681 attggtatgg gcgtttctgg tggtgaaatt ggagcgttaa ctggtccgtc attaatgccg
     1741 ggtggacaag aagaagctta taacaaagtt gcagatattc ttgatgcaat tgctgctaag
     1801 gcaaaagacg gtgcttcatg tgttacttat attggtccaa atggtgctgg acactatgtg
     1861 aaaatggtac acaatggtat cgaatatgct gacatgcaat taattgcaga aagttatgct
     1921 atgatgaaag aattattagg catgtctcat gaagacattg ctcaaacgtt caaagactgg
     1981 aatgctggtg aattagaaag ttatttaatt gaaatcactg gtgatatttt catgaaatta
     2041 gatgaaaata aagaagcatt agttgaaaaa attcttgata ctgcaggtca aaaaggtaca
     2101 ggaaaatgga cttcaattaa cgcattagaa ttaggtattc cattaacaat cattactgaa
     2161 tctgtatttg cacgttttat ctcttcaatc aaagaagagc gcgtaaatgc ttctaaagaa
     2221 ttaaatggtc caaaagcatc atttgatggt gacaagaaag actttttaga aaaaattcgt
     2281 aaagcattat atatgagtaa aatttgttct tatgcacaag gtttcgcgca aatgcgtaaa
     2341 gcaagtgaag ataatgaatg gaatttaaaa cttggtgatt tagctatgat ttggagagaa
     2401 ggttgcatta tccgtgcaca attcttacaa aagatcaaag atgcttacga taataatcca
     2461 ggattacaaa acttattgct agatccttac tttaaaaaca tcgttactga atatcaagat
     2521 gcgctacgtg atgttgtcgc aactggtgtt caaaatggtg taccaacacc tggtttctct
     2581 tcaagtatta attactatga tagttaccgt gcagctgatt tacctgcaaa cttaattcaa
     2641 gcacaacgtg actacttcgg tgctcacacg tacgaaagaa aagataaaga aggcgtattc
     2701 catacacaat ggattgaaga ataatattga ttaaaggata gttgaaagat actatccttt
     2761 tttatatctt ttgataaata taaaacagag tgtgatagag tatctacaac ctataaaaaa
     2821 ttacacaagt attatccttg accttaaaag catcccgaca tatttttaag cattttgtga
     2881 agtaataaaa tatttactgt gttatgatag catgtactat agagaaatag aggtattaac
     2941 ttatggaaaa gttaaatcaa gttatgttat atgttgatga tgttgacaaa gcgaaagcat
     3001 tttggacaga aactttagaa tttgttgttg taagtgaaac accgttagct gaggactatg
     3061 ttgcagttga agtatcacct acgaaagatg ctgaaacgtc gttgacgatt atggcaaaag
     3121 aatttattga aaagtatagt ccagaggtga acctaggaac accatcttta atgtttaaag
     3181 agaaaaactt tgatgcatta tactcaaaat taaatgattt aggtttaact gggcatgata
     3241 tagtagaaat gaatggtcaa cgtgcattta atttccaaga tggccaaggt aactattttg
     3301 cagttagtga ctaaacaatc gattttaata tttatacaaa cctttatatt gattttcgga
     3361 ttgaatttca gtatgaaggt tttattttta tcgttttatg caatcgtttg cacaaatctt
     3421 ttgacttttt tagaaagtgt gactaaactg gtattataca atggttggaa gcgttttcca
     3481 gcgcagtgat taacaggagg tgattaaatg gttacgatta aagatgttgc actaaaagcc
     3541 ggtgtttctc cttcgacagt ttcaagggtt ataaaaggaa atcaacgtat tagcgaagcg
     3601 acaatttcaa aagtgaagaa agttatggaa gaattgaatt attttcctaa tactgctgct
     3661 agaactttaa ttactaacca aacatataaa attggtttag tgttaaaagg gtctgaggag
     3721 cctattcgac tgaatccatt ctacatcaat gtattgctag gaatttctga aacgtgtaac
     3781 cagcatggct atggtacaca aacgacagtc tcaaataatt tgaatgattt aatggatgaa
     3841 gtttataaaa tgattaaaca acgaatggtt gatgcgttta tactgctcta ttcaaaagaa
     3901 aatgatccga ttaaacaaat gttaattgat gaaagcatgc catttattgt gattggtaag
     3961 cctacatcgg atatagatca tcaatttaca cacatagata atgataatat attagcttct
     4021 gaaaatttga cacgacatgt tattgaacaa ggtgtagatg aattaatatt tattacagaa
     4081 aaaggaaatt ttgaagtttc aaaagataga ataaaaggat ttgaaacgat agcttctcaa
     4141 aataaaatta attatcaaat tattgagact agtaatgaaa gagaagttat ttttaattac
     4201 atgcaaaatc tacatacgcg tttgaaggac ccaaatatta aacaggcaat catttcgtta
     4261 gatgctgtgt tacatttagc gattttaagt gtcctatatg aacttaatat tgaaattccg
     4321 aaagatgtaa tgacagcaac gttcaatgat tcttatttaa ccgaaattgc gtcaccacct
     4381 caaaccagta ttgacatcga gcctcgaatg ttaggtcaac aggctggtgc agcaatttta
     4441 aatatattaa aaaataaagc acaggatgtt attgaactcg tcattataga tacagaatta
     4501 aaaataagaa aatcaacaca gcgatagcaa aggagtttta aaatgaataa gcaatggtgg
     4561 aaagaagcag tagcatatca agtatatcca agaagtttta atgatagtaa tcacgatggt
     4621 attggggatt tacctggaat gattgataaa ttggactact taaaagattt aggtatcgat
     4681 gtcatttggc tcagtccaat gtttaaatca cctaatgatg acaatggtta tgatattagt
     4741 gactatcaag aaattatgga tgaatttgga acgatggaag actttgatcg tttattaaaa
     4801 ggtgttcatg atagaggcat gaagcttatt ttagatttag ttgtaaatca tacatctgat
     4861 gaacatcctt ggtttataga atctaaatct agtaaagaca atcccaaacg tgattggtat
     4921 atttggcaag atccaaagcc agatggctct gaacctaaca actgggaaag tatctttaat
     4981 ggatctacat gggaatatga tgctaatact gagcaatatt atttccattt attcagtaaa
     5041 aaacaacctg atttgaattg ggctaatcca gaagttagag atgctgtatt tgaaatgatg
     5101 aactggtggt ttgataaagg cattgatgga tttagagtag atgcaattac gcatattaaa
     5161 aagacgtttg aagcgggtga cttacctgta cctgaggata aaacatatgc cccagcattt
     5221 gatgtagata tgaatcagcc aggtatacaa acttggttac aagagatgaa agatcgctca
     5281 ttaagtaagt atgacattat gactgttggt gaagcgaatg gtgtaagccc tgatgatgct
     5341 gatgactggg tcggggaaga aaatggtaaa tttaatatga tattccaatt tgaacatttg
     5401 ggactgtgga atagtggtga ttctcacttt gatgtaaatt cgtataaatc tgtattaaat
     5461 agatggcaaa aacaacttga aaataaaggt tggaatgcgt tgtttattga aaatcacgac
     5521 caaccacgac gtgtatcgac gtggggtgac gatgacaagt attggtatga atcagcaaca
     5581 agtcatgcag ctgtttattt cttgcaacaa ggtacgccat tcatttatca aggtcaagaa
     5641 attggtatga cgaattatcc atttgaaagt attgaaacgt ttaacgatgt tgctgttaaa
     5701 aatgactatc aaattgtgaa agctcaaggt ggagatgtag acgctttact tgcgaaatat
     5761 aaagatgaga accgagataa ttctcgcaca ccaatgcaat gggatgatac gttaaatgga
     5821 ggatttacaa atggtgaacc gtggttccca gtgaatccga attataaaac tatcaatgtt
     5881 gcacaacaat tagaagatga gcattcagta ttacaatttt ataaagattt aattcaatta
     5941 agaaagtcta atgatgtata cgtatatggt caatttgatt tagtagatgc tgaaaattca
     6001 caagtttttg cgtacacgag aacattaaat gaaaagcaag ttcttattgt aggtaatctt
     6061 actaaccacg aagcagaatt aactgtacca tttgatttaa gccatggaga agtaaagcta
     6121 tttaattatg atgccaaagt taatttaaaa cagttacgtc catatgaagc atgtgttatc
     6181 gaactaaatt aacatattaa tatgccccct aatagaatct aaggccattt gtagacctat
     6241 agatatatta gggggcttct ttgtttttaa tttttaatct tcgtcataag gactctgttt
     6301 aacaggaatc caaagctgaa ttttagtgaa tgggtcatta aatgaaatat cgagagggta
     6361 cacttcaaca tataaatcat ttcgttcata tggcaatgtt aactgcaaac ttgattcaat
     6421 atagtaccaa gcttcattag ttgcataatc aatttcacct tgtaaattga atttcgcaca
     6481 atgtttgcca ggtaaaaatc ggctttctaa gtgtgcagga taacgttcac ttggtacacc
     6541 tacaaatatt tctaaaccat tttcaagagg acaactaata acaaatagtt caaatggact
     6601 aacgtcatta tatcgtcgta actctttaat tttaccatca atgagcaagt cttctaaaaa
     6661 atccggaaca ttaaaaggat gtgacaaata cttagtgtct ataaatcgtg catatccaac
     6721 caatgaaata tcatctgtct cttctaatct gtatggatag ggtgctctct cagtagttga
     6781 taatttgata tataatcgct cttgaatttg taattcatct tttttagtag aagcttgaat
     6841 aggtgatacg ccgtgaaaat cactaaaatc atttgcaaaa tcatttgaat ttgcatagtg
     6901 atatttttta gcgatatcta caagtcgtgt agcaccatta atcacatcat ttgcagcgag
     6961 tgtcatttta cgcgcgcgtg cataagcttc tggagataag ccgacaatca ttttaaatga
     7021 ttgatcaaga tggtatggcg aaagaccaac gtaatcactt aattcttgca aattgaaagg
     7081 ctctaataaa cgatcttcaa tataaacaat tgcctgttgt atttgcttga taacgtccaa
     7141 aactttcact ccaattaatt caatcattta tttttattct acattatttc tataaattat
     7201 acacccattt gttcaatgat tattaaaata gttttgggca ttgtaaaata taatttcata
     7261 atatagtcta gaaaaaaagc gaatgataga acaattgatt tacttgattc gtaatcaatc
     7321 cttgtcattc gctcatttat ttttgtttaa catgtgcgtt ttaattcaat tattgaatat
     7381 cgtcccacca atggttacca tcacgagcaa gtagtaaatc actttctaat ggaccattag
     7441 tacctgattc atagttaggg aattctggat caaccatatt ccattcatct tgaattgcat
     7501 caacaaattt ccatgttgat tttaattctt cccagtgcgt gaagttagtg gcatcacctt
     7561 taagacaatc gaataataga ttttcatatg catctacagt attcatttta tcttgagcgc
     7621 tcattgaata agacaattga acaggttcag tttcgatacc ttgtgtattt ttcttagcat
     7681 ttagatgtaa agatacacct tcattaggtt ggatattgat tactaatagg tttgaatcta
     7741 atagtttatc agtttcatag tataagttca ttggtacttc tttaaattca acgacaactt
     7801 gaattgtttt agatttcata cgtttaccag tacgaatata gaatggtaca ccagcccatc
     7861 taaagttatc aattgttaat ttacctgaaa caaaggtagg tgtgttagag tcatctgcaa
     7921 cgcgatcttc atcacggtat gctttaactt gtttaccatc gatatagcct tcgccatatt
     7981 gaccacgaac aaagttcttt ttaacatctt cagattggaa atgacgcagt gatttaagta
     8041 cttttacttt ctcagcacgg atatcttcac tatttaaact aataggtgct tccatagcta
     8101 ataatgcaac catttgtaac atgtggtttt gcaccatatc ttttagcgcg ccacttgatt
     8161 cataataacc accacgatct tcaacaccta gtatttcaga agatgtaact tggatgtttg
     8221 aaatatattt gttattccat aatggttcaa acatcgcatt cgcaaaacgt aatacctcga
     8281 tattttgaac catgtctttt cctaaatagt ggtcaatacg ataaatttct tcttctttaa
     8341 atgatttacg aatttgattg tttaatgctt cggctgattt taaatcacta ccgaatggtt
     8401 tttcgataac aaggcgttta aatccttttg tatcagtaag accagaagat tttagataat
     8461 cagaaataac gccaaagaat tgtggtgcca ttgctaaata gaatagtcga ttacctttta
     8521 attcaaattg gctgtctaat tcattactaa aatctaataa ttcttgatag ctttcttcat
     8581 tactaacatc atgtctatga tagaagacat gttccataaa cgcgtcaatt ttgtttgtat
     8641 cttttacgtg cttttgaatt gatgatttta cttgattacg gaaatcatca ttagtaatgt
     8701 cacgacgtcc aataccgatg atggcaatat gttcatctaa attgtcttgt tggtagagat
     8761 ggaatattga tggaaacaac ttacgatggc ttaagtcacc agttgcacca aagattgtga
     8821 ttaaacaagg gatgtgtttg tttttagtac tcaagattaa aacctcaatt cttaattaga
     8881 tatatgattt attattataa gataatccat tcagcaggtc attcaatatg ctcgacagta
     8941 tgcagtgtct taaatgaaat atcgattcat gtatcatgtt taatgtgata cttattaatg
     9001 ataagtataa cgtaattatc aaaatttata tagttttgtc tacgttaaag ttagaaaaat
     9061 taactagcaa agacgaattt ttaacagatt ttgattcaag tataaattaa aactaaattg
     9121 atacaaattt tatgataaaa tgaattgaag aaaaggaggg gcatatatgg aagttacatt
     9181 ttttggaacg agtgcaggtt tgcctacaaa agagagaaat acacaagcaa tcgccttaaa
     9241 tttagaacca tattccaatt ccatatggct tttcgacgtt ggtgaaggta cacagcacca
     9301 aattttacat catgcaatta aattaggaaa agtgacacat atatttatta ctcatatgca
     9361 tggcgatcat atttttggtt tgccaggatt actttctagt cgttcttttc agggcggtga
     9421 acagaagccg cttacattgg ttggaccaaa aggaattaaa gcatatgtgg aaatgtctat
     9481 gaatttatca gagtcacatt taaactatcc aattacatat attgaaatcg atgatcatct
     9541 gacatatcat catgatggtt ttactgtaga ggcgcattta cttaatcatg gtattccatc
     9601 atatggatat agagtaatgg cacctgaaac tacaggtaca atcaatgttg aagcgttaaa
     9661 aaacattggt cttgaaccag gtcctaaata tcaagaagta aaatctcatg atacatttga
     9721 acataatggt caagtttatc aatcaaaaga ttttagaggt gagtccaaac agggtccagt
     9781 tgtagcaatt tttggtgata caaaaccatg ttctaatgaa cgtgtgattt ctagagatgc
     9841 tgatgtgatg gtacatgaag cgacctatat agatggtgaa aagcatttag ccaacaatta
     9901 tcatcatagc catattgaag acgtatttgc attgataaaa gaagccaatg ttaaacgtac
     9961 gttgattaca catttgagca atcgctataa tacagaagat ataaatgaaa tttatcaaac
    10021 attgatacaa aatgaagata cacctaattt taattttgta aaagattttg atagttttaa
    10081 agtctaatga caaagtaata aacaatgctt gccaaatagt aataatttat aaaaataacc
    10141 cgtccaacta tgtatgcgat gatgcataca tgtgttggcg ggtttgtttt tattggtctt
    10201 ctatattaga aagttcaata ctacggtcga cggcagcgtt tagacaatct tcgaaaatag
    10261 atactaaatc atattgtgac aatgtatcaa ggccagcttg tgtcgtacca cctttagagg
    10321 taatattttt tcttaattga gccatgctca aatctgaacg ttcaatcatc ttacttgtac
    10381 ctataataag gttgcgtata gattcttcaa cttgttcttt ttctagacca agtttcgtac
    10441 cagctttaac gtattgctcg aatacatgat ataaaaatgc tgggccgctt ccggtgatag
    10501 ctgttacttg atgtaaatga tcttctgata cttcaattac agaaccaaat gctttaacta
    10561 aatcgttaat ttcatcttta gatttagggt caaagttgtt tgaaaaacta atgccagtaa
    10621 cagagtgtcc gacttgcgca tttgtgtttg gcataattct agcaactgga ttttggcatt
    10681 ctaattgttg tttaatataa tcaatcggaa tacctgccat aattgaaatg aagcaattgt
    10741 cttttgtgat atgtggtttg atgcgtgttg ctagagcatc aaagtcatgc ggtttggtac
    10801 ctaaaaaaac ataatctgca tcttttaata atgtcgcatc atcataacta tagttaacac
    10861 ctagtttttc agcgaatgct tttaaagctt gttcattaga tttatttgtt aaatatatat
    10921 cattggcatc taagttgctt gagttaataa ttcctgtaaa tatagcttgt gccatattac
    10981 cagctccata aaatacgagt ttcattaacg tcacatccct ttagtttttg atttgtatgt
    11041 tatattttct tattattgta tatatattag gaaagataat caacttgtct caattatgta
    11101 aagttgataa attgcattct atataattga aaagggaggt taattgatga aaggacaaca
    11161 ttttatagtg actggtggta cgagtggttt aggtttatcg attgtccgaa agttacttga
    11221 aaataaagtg catgtaacgt tgttggtgcg tgatgttgat aaagcaacta gaatctttga
    11281 acaagaattg gggaaaacta taaatgttat tccttgtgac ttaaatgatt tgaagtcgat
    11341 acaggcactg caatttgaag acaatacatc attcgatgga ttcatttata gtgcaggttt
    11401 aggttatttc aaatctattt cagaccatag tttttcagaa atgattgaaa cgtatcagct
    11461 taatttaatt agttttaatg ttttatatac tgtgttgaga ccatatttaa catctaacgc
    11521 acatattata ggtatttcaa gtcaagctgc attttccact caagcaaatg ctgcacatta
    11581 tggggcatcg aaagcagggt tttatgcatt aatgaatgct ttaagactag agtcaccaaa
    11641 catacatatc atgacagtta atgttggccc gattgataca ccttttcatc aaaaagccga
    11701 tccatcaatg aagtatgcta aaaagatggg gaaaattatg cttgatgcta atcagcttgc
    11761 agaagatatc atttatggca ttaaaacaaa acaattggaa attaatcgcc ctaaatggat
    11821 gcaccatgcg ttgaaaatgt atcaaattgc gcctagattt tttgaacgat gttttcctaa
    11881 attatttaaa aataaagcat aaataggtgg gatggcaatg aactgtcaat cggagagtgt
    11941 ggtaagactt tgtgtacgat atgcggaaca actatcagtg tttgaagaat ttacagtgct
    12001 ggatatttta ggcgatattt ctgtagacca aatttcagac agtacattat attatacttg
    12061 tgaaaaattc aaactacttg tgttgcaagg aaatgtgctg ggtgtacaaa taataactaa
    12121 taatgatgaa tcaacatgcg aagtgaaata tagaaagatg ttttaataaa attattaaaa
    12181 gatgaagtgg gagaagtttg cttaaggcac tgccgcaggg cgaaattact aaatactgat
    12241 gcgtgaggac aacgctttaa tttctatcat aagtgagtaa tcttaatcat aaattatagc
    12301 gaattgtaca taaacaacag cagtaaggca tttttataat gaaacgcctc atgctgctgt
    12361 ttttattact gaaaatgact tctacactaa atgattggta tattccaaat cctttacacg
    12421 agctcttgct gttttaatct gatctaaact aactttagta tgatagtttt caatattttc
    12481 ttttaattgg tcgacgctac ttgcacctac aatgatggaa ccaagcacgt catgtgatgt
    12541 taaataacta aatgtcaatg cagataaatt actttcaatt tctttaatag aggctattgt
    12601 ttcacccaat tcatcatgag aataatcaaa aataccatct ttaaatttat tgtctagcac
    12661 attaacactg tttgaagtta ataatccttt agacacaggt cctcttgcca atactttaac
    12721 atcattgttg tgaattgcat ctaataatga ttctggacga ttatcaatca aattgaattg
    12781 agacattatc gtttcgattt gactatgttt taaataataa tcaattacat ttgggcgaat
    12841 agaagaaata ccgtaagcac gtataattcc ttcttgtttc aattcatcaa atgcgcttat
    12901 tgtttcgtct aatgggtcat caatggttcc gccatgaagt tgatataaat cgatatgatc
    12961 gatacctaaa cgctttagtg aacctttaac tgcctcttta atataggatt tactcggatc
    13021 ccatgttgta ctgccatctt ttgttaaacg attgcctact tttgtaccaa tgacaatatc
    13081 atcgcgttgt tgatatttaa gaagtgcctt accaacaact gattcattta tacctttatc
    13141 gtacatatct gctgtatcaa aataagtgat accattttca acagcacaat ctataatttg
    13201 ttcggctttt tttaaatctg tacctaaact catgcaacct agacctaatt cagataatga
    13261 aataccactt tttaatatat ttttttgcat gtctgttctc ctttcgatac actttagcta
    13321 acaagcatag tgtatcaata tataatatga atttaaagga acgtgattat aatggattta
    13381 aatgaaaaaa caattgatcg aacagttatt tataatggca aaattgtaga tgtagaaatt
    13441 catacagtga cattaccaaa cggtgaaacg tcaacaagag aattagttta tcataatggt
    13501 gcagttgctg tttgtgcagt gacacctaaa aaagaagtcg tattagtgaa acagtatcgt
    13561 aaaccagtag aaaaaccatt gctagaaatt ccagctggta aattagaaga tgatgaagat
    13621 agagtcgaag cggcaaaacg tgaattagaa gaagaaacag gatatattgc caaagagtta
    13681 acacatgttg tagatatgta tggttcacca ggtttttgcg atgaacaatt atcaatatat
    13741 tttacggata atttagaaga aggtacagtt cacttagatg aagatgaatt tgtcgaagtc
    13801 attaaagttc cgattgagaa tgttaaatcg atgctaatga ataaagaaat agaagatgcg
    13861 aagactatca ttgcattgca acacctatta ttaaattata atcattctaa ataacaaatg
    13921 agaaaagctt gcattttatt gagaaaactg ttagttttaa ttgtgaagtt tgaaataatt
    13981 tgtaatgatt ttaattatta gtaggggagt ggacatcgtt ggaagaacga ttaaatcgcg
    14041 ttaagcaaca attacaacaa tcatcatata agctaacgcc acaacgcgaa gctactgtta
    14101 gagttctaat tgaaaatgaa aaagatcatc taagtgctga agacgtatat ctgaaagtaa
    14161 aagataaagc gcctgaaatt ggcttggcga cagtatacag aacgttagag ttgttagctg
    14221 aactaaaagt tgtcgacaaa attaactttg gtgatggcgt cgctcgtttt gatttaagaa
    14281 aagaaggcgc aaaacatttc caccatcatt tagtatgtat ggaatgtggt cgtgtagatg
    14341 aaatcgatga agatttgtta ccagaagttg aaaatcgagt tgaaaatgag ttcaatttta
    14401 aaattttaga tcatcgttta actttccatg gtgtgtgtga aacgtgccaa gctaaaggta
    14461 aaggatagta aattgcgtag gttaaattaa ccttcgcttt ttttagaggt gtggttatgg
    14521 aaacaattat tgaagaatat ttgcgtttta tacaaattga aaaaggacta agttctaaca
    14581 caattggtgc ttatagacgt gatttgaaaa agtatcaaga ttatatgact gaacatcata
    14641 tctcgcatat tgattttata gatcgacaat taattcaaga gtgtttgggg catttaatag
    14701 accaagggca atctgctaaa tctattgcgc gatttatttc aacaatccgt agttttcatc
    14761 aatttgctat aagagaaaaa tatgcggcga aagatccaac ggtattatta gattcaccaa
    14821 aatatgacaa aaaattgcct gacgttttaa atgttgacga agtgttggct ttattagaaa
    14881 cgccggatct aaataaaatt aatggttatc gtgatcgtac gatgttagaa cttctgtacg
    14941 caacgggaat gcgtgtatct gaattgatac atttagagtt agagaacgtg aacttaataa
    15001 tgggatttgt acgcgtattt ggtaaaggcg ataaagaaag aattgtacca ttaggcgacg
    15061 cagtcattga gtacttaact acttatattg aaacgattag accgcaactt ttaaaaaaga
    15121 ctattaccga agtcttattt ttaaatatgc atggtaaacc tttatcgcga caagcaatat
    15181 ggaaaatgat taaacaaaat ggtgtaaagg caaacattaa aaagacgtta acgccacata
    15241 cgttacgcca ctcttttgcg acacatttat tggaaaatgg cgcagattta agagcagtgc
    15301 aagagatgtt aggtcactct gacatatcta ctacccaact ctatacacat gtttcgaaat
    15361 ctcaaattag aaaaatgtat aaccaatttc atcctagagc ataaagtgaa caataactca
    15421 aaagtcacaa tacatatgac taaaaatgtc tgtgctattg tggctttttt aaattggttg
    15481 attaattacg tctatgtttt cttaattgaa tcgcttcttc ttttgctgca atcacttctg
    15541 aacgatcacg gcgcatgtga tggtctacaa taaaaggatc tgttgctgtt tcctgattat
    15601 aatcatagtc tggatagttg gccttgatga tgcgttcaaa gactggagtt attggtaata
    15661 taacagatga aaaaggcttt gctgcattca attttgcaat ctgttgctca attaacaact
    15721 gataatcatt taaattaagg tataacgcat ctctgtcttt agcattttgt attatttctt
    15781 tagatttatt aaaagactta taggcgcctt ttaaattatt gcggcgataa tggtaacaag
    15841 cagttgcaaa caagattaaa ctaacaactg catcttgctt actgtagtta ttttcagctt
    15901 tccatgcatc ttctaaaatg tcatgacata ggaaataatg ttgcttagta tgaaattgat
    15961 aatagaaatt tatcagtgcc tgttgcattt tgttatcacc ccaatttaaa agtaagttat
    16021 tttcatgcta taatatttta gagaattatg cacatatgac gcaatacgag gtagatatta
    16081 tgtatgaagt taaattagat gctttcaatg gaccattaga tttattgctg catcttatcc
    16141 aaaaatttga aatagatatt tatgatattc ctatgcaagc attaacagag cagtatatgc
    16201 agtacgttca tgcaatgaaa cagcttgaaa ttaatattgc aagtgaatac ctagtattag
    16261 cgtcagaact cttaatgatt aaaagtaaga tgctattacc acaatcaaca tcagatatgg
    16321 atgttgatga tgacccacgg gaagatttag ttgggcgttt aatagaatat caaaattata
    16381 aagaatatac tgctatttta aatgacatga aagaagaaag agatttttat tttacaaaaa
    16441 gaccgacaga tttatctcat ttggaaacag atgaatcttg ggatccaaat catacgattg
    16501 atttaactga attaattgta gcttatcaaa gagttaaaaa tagagttgag ttaaatacac
    16561 ctaaatctgt tgaaatccga aaagagacat ttaccattca acaagctaca gaacaagtga
    16621 catcgagatt gaaagataaa gatcatttta acttctttag tctgtttacg ttttctgagc
    16681 caattgaaca agtagtcact cactttttag ctattttaga gatgtcaaaa gcaggaataa
    16741 ttaatattga gcaacaacgt aattttgaag atattaacat tattagagga gtgaactacc
    16801 attttggata atcatggtat attagagtcg cttttattta cagctggcga tgaaggttta
    16861 gatgaaaaac aactattaga aatattagat atgtcgaaag accaactcgt tgaattaatt
    16921 gaaaattatt catcacatgg attaatgata caacgatttg gaacgacgta tgttttaacg
    16981 actaaaaaag aagcggcaac gtatattgaa caattaattg aacaaaagtc acaaatgaaa
    17041 ttatcacaag cagcaatgga agtactatca attattgctt ataaccagcc attatcaaga
    17101 agtgatattg aattaattcg tagtatcaat tcagatggtg cggtcaagac tttgattgcc
    17161 aaaggactag ttgaggctaa agtggttaat gaacagcgta gccaacagtt aattactact
    17221 gatttatttt taaatgtatt tggtatttcc aatatagaag atttgccgac aactgaagaa
    17281 gacgatgaag aaatggatgc tttcttcagt aatctagtca atcaaaaagg agaaaataat
    17341 gactaaagaa ttagaacgat tacaaaaacg tatagctaat agcggttata cttcaagacg
    17401 taaggcagaa actttaattt ctgaaggaaa agtgaaagtg aatggtacga ctgtcactga
    17461 attaggaaca aaagtaaagc catcagatac gattgaagtt gaaggtatta aaatagaact
    17521 agaagacaaa atttacattt tattccataa accaactcaa gtgataacaa gtgtatcaga
    17581 tgatagagga cgtacagtgg ttacggatta ctttaaagat atagaagcac gtatttatcc
    17641 tgttggtcgt ttagactatg atacttctgg attgttatta cttacaaatg atggtgaatt
    17701 tactaattta atgacacatc caagatatca aattaagaag aaatatgtag caaaattaaa
    17761 aggttactta atgagagaag aagtgaaagc cctagaaaaa ggtattgaat tagaagatgg
    17821 tatgacgcaa ccggctgaag tgaaagttaa gaaacaagat aaagataaaa acacaacatt
    17881 ggttgaaatt acaattacag aaggtcgtaa tcgccaagtc agaagaatgt tcgaacattt
    17941 tggtcatcaa gtgacgaaac tgtctcgtat tgaatatggg cctttaaatg ttgtcggttt
    18001 gaatgctggt gaaggacgtg tattgacgcc tcatgaagta aaagtgatgc gtcatttagc
    18061 agaacatggg aaataattaa ataaaatatg tatttatcac aaagtttgag aattttttca
    18121 caaaatttta ggtttttaat aactgtatgc gctttcctgt gatataatac ttttgtaaag
    18181 aaaagcatgt gtgggaggta tgacctgtat gtcgaacgaa atacttatcg tagatgatga
    18241 ggatagaatc agaagattac ttaaaatgta tttagaaaga gaatcttttg aaatccatga
    18301 agcaagtaat ggccaagagg cttatgaact tgcaatggag aataattatg cttgcatact
    18361 actagattta atgttgcctg aaatggatgg tatccaggtg gcaactaaat tgcgtgaaca
    18421 taaacaaaca ccgattatta tgttgactgc taaaggtgaa gaaacaaacc gtgttgaagg
    18481 ttttgaatct ggtgcagatg attatatcgt caaaccattt tcaccaagag aagtagtctt
    18541 aagagttaaa gcacttctaa gaagaacgca atctacaact gtagaacaaa gcgaacctca
    18601 cgcacgtgat gtgattgaat ttaaacattt agaaatagat aatgatgcac atcgcgtact
    18661 tgctgataat caagaagtta atttgactcc taaagagtac gaattattaa tatatttagc
    18721 taaaacacca aataaagtat ttgaccgtga acaattatta aaagaagttt ggcattatga
    18781 attctatggt gatttaagaa cagttgatac tcatgttaaa cgacttagag aaaagttaaa
    18841 tcgtgtgtct agcgaagctg cgcatatgat tcaaacagtc tggggcgttg ggtataaatt
    18901 tgaggttaaa tctaatgatg agccggctaa atagtgtcgt aattaaactg tggttaacta
    18961 ttattttaat agtgacgaca gttttaattt tattaagtat tgctttaatt acctttatgc
    19021 aatactattt cacacaagaa actgaaaatg ccataagaga agatgctaga cgtataagtt
    19081 cactggtcga acaatcacat aataaagaag aagcaataaa atatagtcaa acattaattg
    19141 aaaatcctgg tgggttgatg attataaaca ataaacatcg tcaatcaacg gcttcacttt
    19201 ctaatattaa aaagcaaatg ttgaatgaag tagtcaacaa cgaccatttt gacgatgtgt
    19261 ttgataaagg taaatctgtt actcgaaatg taacgattaa agaaaagggt tcatctcaaa
    19321 cttatatttt gttaggctat ccaacaaaag cacagaagaa tagtcatagc aaatatagtg
    19381 gagtatttat atataaagac ttgaaatcaa tcgaagatac aaataatgct attacgatta
    19441 tcactataat tacggctgtt attttcttaa caattacaac agtctttgcg tttttcttat
    19501 cgtcaagaat tacaaaacct ttaagacgtt taagagacca agctacacgt gtatctgaag
    19561 gggattactc ttataaacct tctgtcacaa cgaaagatga aattggtcaa ttatcgcagg
    19621 catttaatca gatgagtaca gaaatcgaag agcatgtcga cgcattatcc acatctaaaa
    19681 gtattagaga cagcttaatt aactctatgg tagaaggcgt cctaggtatt aatgagagtc
    19741 gacaaattat cttatctaat aagatggcga atgatattat ggacaatatt gatgaagatg
    19801 ctaaagcttt cttattaaga caaatagaag atacttttaa atcaaaacaa actgaaatgc
    19861 gcgatttaga aatgaatgca cgattctttg ttgtgactac aagctatatc gacaagattg
    19921 aacagggagg taaaagtggt gttgttgtga cagttcgtga tatgactaat gagcacaatc
    19981 tagatcaaat gaagaaagat ttcattgcta atgtatcaca tgaattacgt acaccgatat
    20041 cattacttca aggttatact gaatcaattg tagatggtat tgttacagaa ccggatgaaa
    20101 taaaagaatc gcttgccatt gtccttgatg aatcgaaacg tttaaatcgt ttagttaatg
    20161 aattgttaaa tgttgctcgc atggatgctg aagggttatc cgtaaataaa gaagttcagc
    20221 ctattgcagc gttactagat aagatgaaaa ttaagtatcg ccaacaagct gatgatttag
    20281 gtctaaatat gacttttaat tattgtaaga agcgtgtttg gagttatgat atggatcgca
    20341 tggaccaagt actaacgaac ttaattgata atgcatcacg ttatacgaaa cctggagatg
    20401 aaattgcaat tacttgtgat gaaaataaaa gcgaagatat tttatacatt aaagatacag
    20461 gcacgggcat tgcaccagaa catttacaac aagtatttga tcgtttttat aaagttgatg
    20521 cagcgagaac gcgaggtaaa caaggtaccg gtttaggttt gttcatttgt aaaatgatta
    20581 tcgaagagca tggtggttcc attgatgtta aaagcgaatt aggaaaaggc acaacattta
    20641 ttattaaact accaaaacca gaataaaact gaatatagtt atttaagaac gcatgttatt
    20701 gattagagat tctaatttat agcatgcgtt ttttgattga agtggggaat tttgtaagtg
    20761 aattaggaaa taggatttat gatttttgcg aataacaact attaaatata ttactaattt
    20821 atacaaaaat ataaagtttg ataaagt
//
LOCUS       DAKPJH010000042        20588 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.042, whole genome shotgun sequence.
ACCESSION   DAKPJH010000042 DAKPJH010000000
VERSION     DAKPJH010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20588
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.042"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(122..610)
                     /locus_tag="OY092_001280"
     CDS             complement(122..610)
                     /locus_tag="OY092_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1076231.1"
                     /translation="MTINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIE
                     HNYLNSGGQFWLAINNHQNIVGTIGLIRLDNNMSALKKMFVDEGYRNLKIGKKLLDKV
                     IMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNL
                     KG"
     gene            complement(886..1587)
                     /gene="isaA"
                     /locus_tag="OY092_001281"
     CDS             complement(886..1587)
                     /gene="isaA"
                     /locus_tag="OY092_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase IsaA"
                     /protein_id="HCX1076232.1"
                     /translation="MKKTIMASSLAVALGVTGYAASTGHEAHAAEVNVDQAHLVDLAH
                     NHQDQLNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADY
                     TTSYNQGSNVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSS
                     AAQIMAQRTGVSASTWAAIIARESNGQVNAYNPSGASGLFQTMPGWGPTNTVDQQINA
                     AVKAYKAQGLGAWGF"
     gene            complement(2195..3250)
                     /locus_tag="OY092_001282"
     CDS             complement(2195..3250)
                     /locus_tag="OY092_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HCX1076233.1"
                     /translation="MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDY
                     HPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAW
                     MITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGVLILPYTKM
                     ITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIG
                     ISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPILMLPILTTAIVSGLVSA
                     LVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADII
                     YRKVFRLYTNDIFKFMG"
     gene            complement(3377..3505)
                     /locus_tag="OY092_001283"
     CDS             complement(3377..3505)
                     /locus_tag="OY092_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076234.1"
                     /translation="MDFKNEDKIKVYCNNMFEKLPISLSKNSEFCDILFFIVLSYR"
     gene            3660..4229
                     /locus_tag="OY092_001284"
     CDS             3660..4229
                     /locus_tag="OY092_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1076235.1"
                     /translation="MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIAT
                     LNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSISNVINEKVLRNIFISIASYIKDA
                     AKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLA
                     LHWFNTSQETADVFIDRNLPFLIHHIAHF"
     gene            4427..4927
                     /locus_tag="OY092_001285"
     CDS             4427..4927
                     /locus_tag="OY092_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076236.1"
                     /translation="MTSIFVFAYLNNTSDNMLFRQQMIYACLLANVRHSSIVCLNNTC
                     RIVDIRCLNTKIGGIDVSETDESQGFERTHNILNINQSSLGVVTYITNKLKSTLKQHI
                     IIACGKKRIDYRLSYNFYTTYYDNVEIKKIDCEYTYAMPIAILIRHMMSFDNDYFFAQ
                     LRHPVL"
     gene            5147..5377
                     /locus_tag="OY092_001286"
     CDS             5147..5377
                     /locus_tag="OY092_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HCX1076237.1"
                     /translation="MKILDRINELANKEKVQPLTVAEKQEQHALRQDYLSMIRGQVLT
                     TFSTIKVVDPIGQDVTPDKVYDLRQQYGYIQN"
     gene            complement(5781..6158)
                     /locus_tag="OY092_001287"
     CDS             complement(5781..6158)
                     /locus_tag="OY092_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076238.1"
                     /translation="MIQSMWFNLHVQDLEKSAQFYKALGFKINRNPQMLDKMVGIQIG
                     QTTVILIENKHFQNVSQQSLNTEPNEVMISLGVNTNEEVDQLVNKVKEAGGTVVQEPT
                     VSQGFYGAMFKDLDGHHFNFLVC"
     gene            complement(6175..6996)
                     /locus_tag="OY092_001288"
     CDS             complement(6175..6996)
                     /locus_tag="OY092_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HCX1076239.1"
                     /translation="MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIG
                     HPHLSIVEGDLSDSDSLQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQ
                     HIVYSTAGGVNRNRTGPHFEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDER
                     ITLPEFINPNIKFTMISSIDIAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSE
                     VTGKSTVIEGEFVSSVAEKQWLEEKGYEVDFELMAEINPTRLSLSDWLKVQDYNK"
     gene            complement(7015..7314)
                     /locus_tag="OY092_001289"
     CDS             complement(7015..7314)
                     /locus_tag="OY092_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2316 family protein"
                     /protein_id="HCX1076240.1"
                     /translation="MSLNKEQRRITAEELQAHFEASTLSVQMIAEKLNVTTEDVEKAL
                     AMKAPLGIFSHQLQRFIHLVWDVRNVINDNIKENGQTPEPYTYLKGEKEDYWFLR"
     gene            7445..8002
                     /locus_tag="OY092_001290"
     CDS             7445..8002
                     /locus_tag="OY092_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1076241.1"
                     /translation="MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTL
                     YRHFKDKSDLCYYVIQRDLDIFITHFKQIKDDYHSDYEVMQVSLDYLLQFKIDNKALL
                     QCIEAGNNKLRFYQSAFYQELFNFYYDLFKSDDDIYKKFKTDMLLQALSTSVFAFQIE
                     HRHISIEAYRNYLLNIYLDEVERND"
     gene            7995..8699
                     /locus_tag="OY092_001291"
     CDS             7995..8699
                     /locus_tag="OY092_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HCX1076242.1"
                     /translation="MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQ
                     KLGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEV
                     YQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSS
                     KSAVTMLTLQYAKGLPNMQINAADPGATNTDLVGDFSNNSKHVSEGIKPIIQLATIDA
                     DGPTGTFINGDGEMPW"
     gene            8797..9807
                     /locus_tag="OY092_001292"
     CDS             8797..9807
                     /locus_tag="OY092_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCX1076243.1"
                     /translation="MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTG
                     FTNADELSHHDERIQFMNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIA
                     QYPNRFVGFATLPINEPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKT
                     AENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSG
                     IFDRYPKLNMIIGHWGEFIPFFLERMDEALFAEHLNHPVSYYFKNNFYITPSGMLTKP
                     QFDLVKKEVGIDRILYAADYPYIEPEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSS
                     NN"
     gene            9827..10657
                     /locus_tag="OY092_001293"
     CDS             9827..10657
                     /locus_tag="OY092_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000448903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076244.1"
                     /translation="METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKD
                     HFTVVAVDRRDYGESELTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGS
                     SSGSIVAMHVLKDYPEVVKKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGM
                     KTFGETLNIAPIDAKMMSQPADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKY
                     NDKITLLNGTDSRGSFPQDVNFYINNETGIPIVDIPGGHLGYIQKPEGFADVLLNMWS
                     "
     gene            10798..11823
                     /locus_tag="OY092_001294"
     CDS             10798..11823
                     /locus_tag="OY092_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HCX1076245.1"
                     /translation="MKAIQIKKYNKNRDVQIRDITIPEIKSTEVLVKVAYAAINPLEN
                     LTINGSVKLIQNYKMPQTIGNELTGTIVKVGSKVEDYKLGDKIYSRLPIDRIGAFAEY
                     VSIESNAIAKLPKNLNLKTGAAVPLTGLTAYQAITEELKAIPGKTLFIPGGSGSFGQM
                     AVPIAKSLGLKVIVSGSPRLKDQFLAKGVDQYIDYKTENYCEVLSDIDYVIDTLGPNE
                     FDKELSVMKPGGTIVSLINAPNKAFAVKNNFSPFKKLLFGLAGKKFDKKAQKKSIDYR
                     FIFVRSDGEQLKILNKIIEQNNIIPDIDDHIFTIDEIDKALDYTFNHHTNGKVLIRID
                     NSDNTIY"
     gene            complement(12044..12934)
                     /locus_tag="OY092_001295"
     CDS             complement(12044..12934)
                     /locus_tag="OY092_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HCX1076246.1"
                     /translation="MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSV
                     DGALVSEDIPLSELTEGCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLD
                     ACLTPILAPFTTITHMIGVVDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSAD
                     VETTSKLLKDLEVINPEADIQVGMHGSVTLPISVRQMTVTSDNKHESLHKTINHQFVQ
                     SPVKCTKAEFIKRLACLPSHIYRLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVP
                     EYLVLIGKGISKEDYQCLEQ"
     gene            complement(13034..14374)
                     /locus_tag="OY092_001296"
     CDS             complement(13034..14374)
                     /locus_tag="OY092_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000895187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HCX1076247.1"
                     /translation="MLEVKYDMRTGHYTPIPNEPHYLVISHADKLNATEKAKLRLLII
                     KQKLDISLAESVVSSPIASEHVIEQLTLFQHERRHLRPKISATFLAWLLIFLMFALPI
                     GIAYQFSDWFQNQYVSAWIEYLTQTTLLNHDILQHILFGDYGVLSLGTYSLVWALPVV
                     ILISLSTAIIDQTGFKSWMIWAIEPSMLRIGLQGNDIVPLLEGFGCNAAAISQAAHQC
                     HTCTKTQCMSLISFGSSCSYQIGATLSIFSVAGKSWLFMPYLILVLLGGILHNRIWLK
                     KNNQQLSVPLPYDRQLHMPNIRQMLLQMWQNIQMFIVQALPIFITICLIVSILSLTPI
                     LNVLSQIFTPILSLLGISSELSPGILFSMIRKDGMLLFNLHQGALLQGMTATQLLLLV
                     FFSSTFTACSVTMTMLLKHLGGQSALKLIGKQMLTSLSLVIGVGIIVKIVMLII"
     gene            complement(14368..15474)
                     /locus_tag="OY092_001297"
     CDS             complement(14368..15474)
                     /locus_tag="OY092_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HCX1076248.1"
                     /translation="MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKH
                     WPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYEL
                     NIFENTVVTNISVDDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
                     DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQR
                     LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPI
                     VQQLFATTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLT
                     QREGLPAKQDVIESYQKNQMYLDDYSCCEVSCTC"
     gene            complement(15809..16105)
                     /locus_tag="OY092_001298"
     CDS             complement(15809..16105)
                     /locus_tag="OY092_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HCX1076249.1"
                     /translation="METIGSIIYLKEGSQKLMIINRGPIVEIENQKYMFDYSGCKYPI
                     GVVEDEIYYFNEENIDSVIFKGYSDQDEVRFQELFDNMKQNLDSEIQRGKVTQQ"
     gene            complement(16093..16461)
                     /locus_tag="OY092_001299"
     CDS             complement(16093..16461)
                     /locus_tag="OY092_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076250.1"
                     /translation="MSNKLDEINKIITAKHEQMDDLYDEKREVKALIDESDALNHSID
                     QLYQHLGERYYSSNMASRMEQFRDEFHFAKRRSTVALHEQQQQIQHGIRKAEEEMIDL
                     EMRRNVEIETVTKEENKWKQ"
     gene            complement(16476..16754)
                     /locus_tag="OY092_001300"
     CDS             complement(16476..16754)
                     /locus_tag="OY092_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04197 family type VII secretion effector"
                     /protein_id="HCX1076251.1"
                     /translation="MMSTVQSDIFKTNSASSSIKSAVETCNNVSKPDKDESTTVSGNN
                     NAHSVIDDLMSKNQSVAEAIRTASDNIQKVGEAFDQTDVMIGNEIGKN"
     gene            complement(17091..17957)
                     /locus_tag="OY092_001301"
     CDS             complement(17091..17957)
                     /locus_tag="OY092_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001005521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HCX1076252.1"
                     /translation="MNEQWLEHLPLKDIKEISPVSGGDVNEAYRVETDTDTFFLLVQR
                     GRKESFYAAEIAGLNEFERAGITAPRVIASGEVNGDAYLVMTYLEEGASGSQRQLGQL
                     VAQLHSQQQEEGKFGFSLPYEGGDISFDNHWQDDWCTIFVDKRMDHLKDELLNRGLWD
                     ANDIKVYDKVRRQIVAELEKHQSKPSLLHGDLWGGNYMFLQDGRPALFDPAPLYGDRE
                     FDIGITTVFGGFTSEFYDAYNKHYPLAKGASYRLEFYRLYLLMVHLLKFGEMYRDSVA
                     HSMDKILQDTTG"
     gene            18175..19239
                     /locus_tag="OY092_001302"
     CDS             18175..19239
                     /locus_tag="OY092_001302"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HCX1076253.1"
                     /translation="MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTY
                     KNPTLSQTIQGNTYDNPIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQP
                     RMFRLLEDDALINRMGFNNIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYI
                     KVIDTFKHDVSFFTVNISSPNTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKL
                     TSDMDFDGLKALLPAITETFDGIILANTTRQRDGLTSANKVEEGGLSGRSLFERNLKL
                     IKYAYQQTNGEFLIIGTGGVFSTEDAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGI
                     ARYLKDHHFDNVSDIIGLDA"
     gene            19394..19669
                     /locus_tag="OY092_001303"
     CDS             19394..19669
                     /locus_tag="OY092_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076254.1"
                     /translation="MTKETDNKKTVATSDNKDTQQQNQPEEDERQGLNGYRKTDLDLE
                     IEQELREMMKTGENETKNDYKKFKVFSLISTLVIVILAIIRFVHKMM"
     gene            complement(19855..20577)
                     /locus_tag="OY092_001304"
     CDS             complement(19855..20577)
                     /locus_tag="OY092_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HCX1076255.1"
                     /translation="MINAEPIISKMKNQKINYDKVLKKLIGQWEREAIRPKILLHSCC
                     APCSTYTLEFLTQYADIAIYFANSNIHPKNEYLRRAKVQEQFVEDFNRKTGANVKYIE
                     APYEPHKFVKMVKDKELADEKEGGLRCTACFEMRLDIVAKAAVEHGYDYFGSAITLSP
                     KKNAQLINELGMDVQKIYDVNYLPSDFKKSKGYERSIEMCNDYNIFRQCYCGCVFAAM
                     QQGIDFKTVNKEAKAFLEQYPD"
BASE COUNT         6866 a         3700 c         3156 g         6866 t
ORIGIN      
        1 ataatatcct ctaatttaaa tcaaacgata tatcacgtca gccttttata tttaaacgct
       61 atatgccact tttaaaatga atattactaa ggtcgccata tcaattattc attgattcga
      121 attaaccttt taaatttctg taataaaacc tattatctac atctaattta ggaaaactac
      181 ttggtaaatc tcctcgctta atttcacgga agccattatt agaataaaaa tactgtgcac
      241 taataaattt atcaattgtt cctaaataaa taccatcgat attttgttct ttacatgtca
      301 ttataacttt atctaaaagt tttttaccta tttttaaatt cctataacct tcatcaacaa
      361 acattttttt aagtgcagac atattattat ctagtctaat caaacctata gtaccaacaa
      421 tattttgatg attgtttatt gcaagccaaa attgccctcc actattcaaa tagttatgtt
      481 cgatgttctc caaatcaggt tgatcatctc tatcaatttt tatattaaat tcattttttt
      541 gaatcgataa aataaactcg attagctctt ccttataaga cctattatat tcaattatgt
      601 ttatagtcat ttttatctcc agtttcattt aatttaatca taaaatgtgc gtttagtttg
      661 tatctagtgt actcagtaca gcctcaaatg aagtttcatt ccacttggca cttaataaag
      721 acaagtattt tagcagtaat acaataaagt ccaataaatt tccctaactt caatatccac
      781 tttttaagaa atgtattttt gattaataaa aaaactctcc ccaatttcta tgggaagagc
      841 tatatattta atgtttaaac attactttta tttattatga aggaattaga atccccaagc
      901 acctaaacct tgtgctttgt atgctttaac agctgcgttg atttgttggt caacagtgtt
      961 tgttggaccc caacctggca tagtttggaa taaacctgaa gcacctgatg ggttgtaagc
     1021 atttacttga ccatttgatt cacgagcgat gattgcagcc catgtagaag ctgaaacacc
     1081 agtacgttga gccatgattt gagctgctga tgaaccagta gcacctgcag tattaccatt
     1141 gcttaatctc actgaacttg aagtagttga agtgctgtag ttatggtaag ttggagctga
     1201 aacagcttca acgtttgagt tacttgattg tgcattgtag cttactgatt gtacatttga
     1261 accttggttg tatgaagtag tgtagtctgc acctgcaacg tttgagaaac cagcagtttg
     1321 accattagct gcttcatagc tccatgacca tgtagtacca tttgaagtga agttatattg
     1381 gaaaccatct tttacaaagt ggatgtcata tgcaccatct ttgattggag ctgcatttaa
     1441 ttgatcttgg tgattatgcg ctaagtcaac taagtgtgct tgatcaacgt ttacttcagc
     1501 agcgtgtgct tcatgtcctg tgcttgctgc gtaacctgtt acacctaatg ccactgctaa
     1561 tgatgatgcc ataattgtct ttttcatagt aaaaaatcct ccagtaataa ttgtaagttt
     1621 atgtttttag taattatatt ttgaatttga atgtcgtagt gcaagtttaa attgtctttt
     1681 atttctttca acggtactca ctatatcata aaaaagtagc aagtaaatta cattttcttt
     1741 acaaaacatt acaatatcaa gtgttatttg taatgttgaa atatggttgt tttatactgt
     1801 aatgtgaaat atgtttcttt ttgaatctaa tcaatccttg aaataagcat aaatgcataa
     1861 gttttttact atatttagct caactattac agctttcgta atattacaga ttgtattttt
     1921 gttacatgct tgtaacatta ccgtcatcaa atacaactta atttgatcag ttaaacacaa
     1981 ttaaaaagca atcaatacat aggttccatc acatgtattg attgctatta atattaaata
     2041 ttcaaagtga ctatgcacat atcttttgtg gattgactta tcttttatta gcgcaaatta
     2101 tctgctgttc aattatattg ttcaacttca ttctcgcaat tcacaataac attaaataat
     2161 tttcggtctc atattttcaa aaaacatact gtccttatcc catgaattta aaaatatcat
     2221 tagtatataa acgaaacact ttacgataaa tgatatctgc aagccaagct gttacaaatg
     2281 gtacaacaaa gaacgctact acaattagta agacactcaa ccaagcagaa tcaacctcca
     2341 taaatttaaa tgcattaatc ggtcctacca tccctataaa accaaatcca gctgattctt
     2401 tcgttccatg aatacctact aatgctgata ccaaacctga tacaatggct gttgtcaata
     2461 ttggtaacat aagaattgga tatttcacca tattaggtat catcatttta acgcctccaa
     2521 agaagacgga taacggcacc cctaaacgat tcactttact tgtaccaatt atcaatactg
     2581 cttcagtcgc ggagatacca attgacgctg atccagctgc taaacctgta atacctatcg
     2641 caaaggcaat ggccacagtt gatagtggag aaataataat aagactaaat accattgaaa
     2701 tcaaaatact catgacaatc ggttgtaatt ctgtaaaacc attaaccata ttaccgatgg
     2761 ctgttgtaat cattttcgta tacggcaata ttaaaacacc aattgcacct gaaataccgc
     2821 caacaactgt tgggaataca atcaatgcca tactacctac gcgatgttga ataagtaaaa
     2881 tgaacaacac tgcaatcgct gctgtaatca ttgtattaat taaatcacca atacccgtaa
     2941 tcatccaagc accattttta aactgcgctg caccgcttcc tacatatgct gcactcgcca
     3001 caacagcaat tgctaatggt gataggtcaa atttcatggc aaccaatgca ccaatcaaag
     3061 caggtactgt aaattgaatt gcaacgacaa cgcctaataa cgttttaaaa atcggatgat
     3121 aatccataaa gtatttaaaa atttctccaa gtatcgcatt aggaactaaa cccgcaacaa
     3181 tacctatggc gacacctgat aaaactctaa atataaaatc tttgggtgta attgttttaa
     3241 ttgatgtcat aatatcatcc ttccatttat gtatatacat ctgtatgcaa ataataaaga
     3301 gccttaagtt ataagctgcc actagcttaa attctaagat gtgcatgccg atgttgttat
     3361 atttaggcta gcagtatcat ctataactca agactatgaa aaatagtata tcacaaaatt
     3421 ctgaattttt agataaagaa attggcaatt tttcaaacat attgttacaa tacactttta
     3481 ttttatcttc atttttaaaa tccattaata caatagaaga aagacattca aatgcttacc
     3541 aaaaaggtac attatttgtt aggagcgtat cagcacttac atatcatcaa cacaattgac
     3601 aatataatag aagatactga taataagtgt taaaacaaca gatgttaggt agtgaacaaa
     3661 tgatggaaag taaatccata gatccaagaa tcgttagaac caaacaattg cttgtcgatg
     3721 cttttcttaa aatttctaga gaaaagaaat tatctcaaat tacagttaaa gatatcactg
     3781 atattgctac gctaaatcgt gcaacatttt acgctcattt cactgataaa gaagacctcc
     3841 tagactacac attgtctgta accattttaa aagacttgaa tgataacttg agcatttcta
     3901 atgtcattaa tgaaaaggta ctgcgtaata ttttcatttc aattgcgagt tatatcaaag
     3961 atgctgcaaa gtcttgcgaa ttaaatagtg aagcattttg caacaaagca catcaacgta
     4021 ttaataatga attagaagat atttttgcga ttatgttaga aaacagctac ccagagcatc
     4081 aacgcgatat cattgtaaat agtgcgagtt ttttagcagc tggtatctca ggcttagcat
     4141 tacattggtt taacacgagt caagagacag ccgatgtgtt tatcgatcgc aacctaccat
     4201 ttttaattca tcatatagca catttttaat aaaacttagt atttagtcat gcatcttgaa
     4261 atcactatgt gacttaggtt catacttgta cacacaataa aatttaacgt attacgatta
     4321 atttgcagtg tctaggacat aaatcaacgt cctatactct acaaagccat attggcagtc
     4381 gttaactgaa tgaaaataag cttgtcatta aaacatatag attttagtga caagcatttt
     4441 tgtttttgcg tacttaaaca acacttcaga caatatgttg tttaggcaac aaatgatata
     4501 tgcgtgttta ttggcaaacg tacgacatag tagtatagta tgtctaaaca acacatgtcg
     4561 tatagttgat atacgttgtt taaatactaa gataggaggg attgacgtga gcgagacaga
     4621 tgaatctcag gggtttgaac gcacgcataa tatattaaat attaatcaga gtagtctggg
     4681 tgtagtgaca tacattacaa ataaattaaa gtcgacgttg aagcaacaca taataattgc
     4741 ttgtggtaaa aagcgaatcg actatcgact gtcgtataac ttttacacta cgtattatga
     4801 taatgtagaa atcaagaaaa tcgactgtga atatacctat gctatgccca ttgcaatttt
     4861 aataagacac atgatgtcat tcgacaatga ttatttcttt gctcagctac gtcatcctgt
     4921 cttataaaac aacattgcag acatgtatat caaacgacac ttcaataaca tcagtttgcc
     4981 atcgtactac tattaaaatc gtgtctcaaa ccccttattt taattccaaa aatctgctgg
     5041 tcaaaagacc gagaaactaa aaacattact gaatgtgttg ataaattacc ttatagaaat
     5101 aatctcaaaa tatatcaaca cttgattcta aggaggatat gacaatatga aaattttaga
     5161 tagaattaat gaacttgcaa ataaagaaaa agtacaacca cttactgtag ctgaaaaaca
     5221 agaacaacat gcattgcgtc aagactactt aagcatgatc cgaggacaag tattaacaac
     5281 attttccaca ataaaagtgg ttgatccaat cggtcaagat gtcacaccag ataaagttta
     5341 tgatcttcgc caacaatacg gttatattca aaattaatat ttgctcacga ggtattgcac
     5401 ttaaggtgcc aactgacctc ataaacaaag cccatactga ttgaagacac taatgtgtcc
     5461 aggctgggac ataaatcaat gttctatgct ctacgaagtt atattggcag tagttgactg
     5521 aacgaaaatg cgcttgtaac aagctttttt caattctagt caggggcccc aacacagaga
     5581 atttcgaaaa gaaattctac aggcaatgca agttggggat gggccccaac aaagagaaat
     5641 tggattccca atttctacag acaatgcaag ttggggtggg acgacgaaat aaattttgcg
     5701 aaaatatcat ttctgtccca ctcccacatt aaacttcatc tctgtatggg ctttttattt
     5761 attcttttga gaatttcatt ttagcagacc aaaaaattaa aatggtgtcc atcaagatct
     5821 ttgaacattg caccataaaa cccttggctt actgttggtt cttgaacgac tgtgccacct
     5881 gcttctttca ctttattcac caactggtca acttcttcat ttgtgttcac acctagagaa
     5941 atcatcactt catttggttc agtattaagg ctttgctgac ttacattttg aaaatgcttg
     6001 ttttctatta aaattacggt tgtttgacct atttgaatgc ccaccatttt atctaacatt
     6061 tgtgggtttc tatttatttt aaatcctaac gctttataaa actgtgcgct cttttctaaa
     6121 tcttgaacat gcaaattaaa ccacattgat tgaatcatga ttgcacccca ttcattactt
     6181 attatagtct tggactttaa gccaatcact taatgataat cttgttggat ttatttcagc
     6241 cattaattca aagtctactt cataaccttt ttcttccaac cattgctttt ctgcaacact
     6301 actaacaaat tctccttcaa taacagtcga tttacctgtc acttcactaa aaattgttgc
     6361 tgcttcactt aatgtaactt catcggaacc aatctctatt gattgatgcg taaagctttg
     6421 tggatgtgca aaaatatacg atgcaatttt agctatatca atagaagaaa tcattgtgaa
     6481 ttttatattc ggattaataa attctggtaa tgtaatacgt tcatcttcga ctttagcaat
     6541 gcgtaaaaaa ttatccataa agaatgatgg tttgataact gttgcgttta tattagattc
     6601 cattaatcta ttttctattt ttgctagtac ttcaaagtgt gggccagttc gatttcgatt
     6661 aacccctccc gcagtactat acacaatatg ttgaatattt tcttgctcag ctatttcaat
     6721 tatcttcata ccttgtctta attcttcgct aacatcatct ttaacgattg gctgaatact
     6781 gtataagcca tacttccctt tcatcgctga ttgcaaacta tcactatcac tcagatcacc
     6841 ttcaacgatt gataaatgcg gatgtcctat gtctgaaagt ttacgattat tcttatttct
     6901 agttaatgca cttacatacc atccatcctc taacaactgt tttacaactg cattaccttg
     6961 cttccctgtt gcgcctatta ctaaaatatc tttcatttta gatccactcc ccttttatct
     7021 taaaaaccaa tagtcctctt tttcaccttt taaatacgta tatggttctg gtgtttgtcc
     7081 attttcctta atattgtcat ttattacatt tctgacatcc catactaaat gaataaatcg
     7141 ttgtaattga tgactaaaaa tgcctagtgg cgctttcata gctaatgctt tttccacatc
     7201 ttctgtggta acattcagtt tttctgcaat catttgaacc gataaagttg atgcttcgaa
     7261 atgtgcttgc aattcttcag ctgtaatacg tctttgctct ttatttaaag acatacgcaa
     7321 cactcttttc ttttatgata tttaatagtt attgcaaatt cattgctatc tttcttaaca
     7381 cgctttataa taaacggaga gttatccgtt tgtcaatttt agagaatttt aagtaggtgt
     7441 aatcatgcga aaagatgcaa aagagaatag gcaacgaatt gaagaaatag cacacaaact
     7501 ttttgatgaa gaaggcgttg aaaacattag tatgaatcgt attgctaaag aactaggtat
     7561 cggtatgggg acattgtatc gacatttcaa agataaaagc gatttatgct actacgtcat
     7621 acaaagagac cttgatattt tcatcactca ttttaagcaa attaaagatg actatcattc
     7681 tgattatgag gttatgcaag tgtcgttaga ttatctttta caatttaaaa tcgataataa
     7741 ggcactactg caatgtattg aagcaggcaa caataaatta cgtttttacc aaagcgcatt
     7801 ttatcaagaa ttatttaatt tttattatga cttatttaaa agcgatgacg acatttacaa
     7861 gaagttcaaa acagatatgc tgttgcaagc attatcaact agtgtatttg ccttccaaat
     7921 agagcatcgc catatttcaa ttgaagcgta cagaaattat ttattaaaca tttatttaga
     7981 tgaggtggaa cgtaatgact aaaattgtgt taatcacagg aggcaataaa gggttaggct
     8041 atgcaagtgc agaggcactt aaagcattgg gttacaaagt ttatataggt tctcgtaatg
     8101 acgtaagagg acaacaagca tcacaaaaat taggtgttca ttatgtacag ttagatgtta
     8161 caagtgacta ctcagtcaaa aatgcttata acatgattgc tgaaaaagaa ggccgtcttg
     8221 atatcctcat taacaatgca ggtatatctg gtcaattttc agcaccttcc aaattgacac
     8281 ctcgtgacgt tgaagaagta tatcaaacga atgtatttgg tatcgttcga atgatgaaca
     8341 cattcgtccc tctcttagaa aaatctgaac aacctgttgt cgtcaacgta tcaagtggtt
     8401 taggttcatt tggaatggtt acaaaccccg aaacagctga atctaaagtg aattcattag
     8461 cttattgttc gtctaaatcg gcagtaacaa tgctaacgct acaatacgct aaaggattac
     8521 ctaacatgca aatcaatgct gctgatccag gcgctacaaa tactgattta gttggtgatt
     8581 ttagcaataa ttcaaaacat gtttctgaag ggatcaagcc aatcattcaa ttagcaacca
     8641 ttgatgcaga tggtccaaca ggtacattta ttaatggcga tggagagatg ccttggtaga
     8701 tcaattttat gttacaaata ttaaatttag aggtaaataa agaatgcttc tgcaatagat
     8761 gcaatataca tgcaaaaaaa tatggaggcg aattaaatga aaagtattac gtttgaagaa
     8821 cattatgtca ttgaagatat tcaaaaagaa acgatgaatg cgatatcagc agatcctaaa
     8881 ggtgtaccga tgaaagtaat gttagaaggc cttgaaaaaa agaccggttt tacaaatgcc
     8941 gacgaattat cacatcatga tgaacgtatc caatttatga ataatcaaga cgttcaaatt
     9001 caagtcttat cttatggaaa tgggtctcct tcaaatttag ttggtcagaa agccattgaa
     9061 ttatgtcaaa aagcaaatga tcaattggca aattatattg cacaatatcc caatcgcttt
     9121 gtaggctttg caactttacc tatcaatgag cctgaagccg cagcgcgaga attcgaacgt
     9181 tgcatcaatg atttaggatt caaaggtgcg ctcattatgg gacgtgcaca agatggtttt
     9241 cttgatcaag acaaatatga cattattttc aaaacagctg aaaatttaga cgtaccgatt
     9301 tatctacatc ccgcgccagt taacagtgac atttatcaat catactataa aggaaattat
     9361 cctgaagtaa ctgcggcaac atttgcttgt tttggttatg gttggcacat tgatgtcggt
     9421 attcatgcaa tacatcttgt attatctggc atttttgatc gttatccaaa gttaaatatg
     9481 attattggac attggggtga gtttatcccc ttcttcttag aacgtatgga tgaagcttta
     9541 ttcgctgaac atttgaacca ccctgtaagc tattacttta aaaataattt ttatatcaca
     9601 ccgagtggca tgttaacgaa gccacagttt gatttagtca agaaagaagt aggtattgat
     9661 agaattcttt atgctgctga ttatccatat attgagcctg aaaaattagg tgtattttta
     9721 gatgaactgg gtttaacaga tgaagaaaaa gagaaaataa gttatacaaa tggtgctaaa
     9781 ttattaggtt tatcatctaa caattaacaa atggaggtca ttgaatatgg aaactttaga
     9841 attacaaggc gctaaattac gataccacca agtcggacaa ggacccgtgc tcatctttat
     9901 tcctggtgca aacggtaccg gagacatttt tctgcctctt gcagaacagt taaaagacca
     9961 ttttactgtt gtagccgttg atcgtcgtga ttatggagaa agcgagttaa ctgaaccact
    10021 tcctgattcc gcttctaacc ctgacagtga ttatcgtgtc aaacgcgacg cacaggacat
    10081 tgccgaactt gcaaagtcat taagtgatga acctgtctat atattaggtt caagttcagg
    10141 ttcaatcgtt gcgatgcatg tgttaaaaga ttaccctgaa gtcgttaaaa agattgcatt
    10201 tcacgaacca ccaattaata catttttacc agacagtact tattggaaag ataaaaatga
    10261 tgacattgtg catcaaattt taacagaagg cttagaaaaa ggcatgaaaa catttggtga
    10321 aacattaaat atcgcaccaa ttgatgcaaa aatgatgtct caacctgctg atactgaaga
    10381 aggacgtata gaacagtaca aacgtacgat gttctggtca gaatttgaaa ttagacaata
    10441 tacgcattca gatattactt tggatgattt cacaaaatac aacgataaaa tcaccctact
    10501 aaatgggaca gattctagag gctccttccc acaagatgtt aacttttata taaataacga
    10561 aactggcata cctattgtag atattccagg tggtcactta ggttatattc aaaaacctga
    10621 aggctttgct gatgtattat taaatatgtg gagttaattg attttatagc tttatacaac
    10681 tgcaccatgc tgaaaagtta catttataaa ttgataatat acttatagag tgaaatattt
    10741 gtggggtcta atgaaaatat tgtaatgcat tttaatcact gaggagccat atatactatg
    10801 aaagccattc aaataaagaa atacaataaa aatagagatg tacaaattag agatattact
    10861 attccagaga tcaaatctac tgaggtactt gtaaaagtag cttatgcagc aattaatcca
    10921 ttagaaaatt taactattaa tggaagtgtc aaattaattc aaaactataa aatgcctcaa
    10981 actattggta atgaactcac aggaacaatt gttaaagtag gaagtaaagt cgaagattat
    11041 aaattaggcg ataaaatata ttcacgatta ccaatcgatc gtataggtgc ttttgcagag
    11101 tatgtttcta ttgaatctaa tgctattgca aaattaccta aaaatttaaa ccttaaaaca
    11161 ggtgcagcag tgccgttaac aggtttaact gcttatcaag caattactga agaattaaaa
    11221 gctatacctg gtaaaacatt gtttatacct ggtggttcag gcagctttgg acaaatggca
    11281 gtacctatag caaaatcatt agggcttaaa gttattgtat ccggaagtcc gagacttaaa
    11341 gatcaatttt tagctaaggg tgtcgatcaa tatatagact acaaaactga gaattactgt
    11401 gaagttttat ctgacattga ttatgttata gacacacttg gaccaaatga attcgataaa
    11461 gaattatcag ttatgaaacc tggtggtact attgtcagtc ttattaatgc gcctaacaaa
    11521 gcatttgctg tgaaaaataa tttttcacca tttaaaaaat tgctatttgg tttagcaggt
    11581 aaaaaattcg ataaaaaagc tcaaaaaaag tcgatagatt atcgttttat atttgtacgt
    11641 tcggatggtg agcaattaaa aattttaaat aaaatcatcg aacaaaacaa tatcatacca
    11701 gacatcgacg accatatttt cacaatagac gaaattgaca aagcacttga ctatacattt
    11761 aatcatcata caaatggcaa ggtattaata cgtattgata actctgacaa cacaatttat
    11821 tgattaaata gatagtacct gaatttatct tatatttatt tgtagcttta aaaataatat
    11881 caattattat ctttgacctt atggatacta ttaatagatc tgtatttaac aataaagaaa
    11941 tatacctaat aaaataattt ataaatgccc ctctcactac aatttatata acaagtgggg
    12001 catttattat ctatatactg ttcattcttt cccactgaaa acactactgt tccaaacatt
    12061 gatagtcttc ttttgaaata ccctttccga taagcaccaa atattctggc actttttttg
    12121 aaaatgctac aggtgttaat tcatattgtc cttgtgtaaa ttgaatgaga tacgtatgtg
    12181 cggtgtcttc aaatgtcata aaccctttca acctataaat atgagacgga aggcatgcta
    12241 aacgttttat aaactctgct ttagtacatt tgactggtga ttgcacaaat tgatgattta
    12301 ttgttttgtg taatgattca tgtttattgt cggaagtaac tgtcatttgt ctaactgata
    12361 ttggtaaagt gacgctgcca tgcataccga cttgtatatc tgcctctggg ttaataactt
    12421 ctaaatcttt caatagtttg ctcgttgttt caacatctgc tgaatctatt ttattaacaa
    12481 ataagacaga acaatatgct aattgctcat aaaataagcc ttggatgtct tttggaaatg
    12541 attttatatg tttatacatg cttgcatcta caacaccaat catatgtgta atggttgtaa
    12601 acggagctaa aataggcgtt aaacaagcat ctaagacaga gaccggttct gcaatcccac
    12661 tacattcaat aaatacaatg tctggttgct cttttaaata taattgatgt aattgttctg
    12721 atacatctgc tttcattgca caacagatac acccctctgt cagttcactt aaaggtatgt
    12781 cttcagatac taaggcacca tcaacactca ttttaccaaa ttcattcatg ataactgccg
    12841 gtttcagcga ctcctttaat gattcagcga gcaaatgatt taagacagtc gttttaccgc
    12901 cacctaaaaa cccacctata ataactattt tcatctgcga ctctcctctt atacttcata
    12961 tgaatagcat attccaagat atctttccta ttgactgaca tgactctata ttcagttata
    13021 gttcatttct tttttaaata atcagcatta ctattttaac aatgatgcct acaccaataa
    13081 ctaaagacaa tgatgtcaac atttgctttc caattaattt tagtgctgac tgaccaccta
    13141 aatgtttcaa aagcatcgtc attgtgaccg agcacgctgt aaatgttgaa ctaaaaaaca
    13201 caagtagtag taactgtgtt gctgtcattc cttgtaataa ggcgccttga tgcaaattaa
    13261 acaagagcat gccgtctttt cgaatcattg aaaataaaat ccctggtgac aattctgacg
    13321 agatgcctaa taacgataat ataggtgtaa atatttgtga taaaacattc aaaattggcg
    13381 ttagtgataa aatactaaca ataagacaga ttgtgataaa aataggtagc gcttgaacga
    13441 taaacatttg tatattttgc cacatttgta gcaacatttg acgtatattt ggcatatgta
    13501 attgtctatc ataaggtagc ggaacgctaa gttgttgatt attctttttc aaccatatcc
    13561 tattatgtaa gatgccacct aaaagtacta atattaagta cggcataaat agccatgact
    13621 ttccagctac actaaaaata gataatgtcg cacctatttg ataactacaa gaactaccaa
    13681 agcttattaa actcatacac tgtgtcttcg tgcaggtatg gcattggtgt gctgcttgtg
    13741 aaatggcggc tgcattacat ccaaatcctt ctaatagtgg cacgatatca ttgccttgta
    13801 atcctatccg taacattgac ggttcaattg cccatatcat ccatgatttg aatcctgttt
    13861 gatcaattat agcagttgat aaactaatca atattacaac cggcaatgcc catacgagcg
    13921 aatatgttcc aagtgatagc acaccataat caccaaataa tatatgctgt aatatatcgt
    13981 gattgagcaa tgttgtttga gttaaatatt ctatccatgc tgatacatac tgattttgaa
    14041 accaatctga aaattgataa gcaataccaa ttggcaatgc aaacattaaa aatatcaaca
    14101 accaggctaa aaatgtcgca cttattttag gtcttaaatg tcgtcgctca tgttgaaata
    14161 gtgtcaattg ttctatcaca tgttcgctcg ctataggcga agaaactaca ctttctgcca
    14221 atgaaatatc taatttctgt tttatgatta ataatcttaa tttcgctttt tctgttgcgt
    14281 taagtttatc cgcatgacta ataaccaaat aatgaggttc attaggtatg ggcgtataat
    14341 gcccagttct catatcatat ttcacttcta acatgtgcat gacacttcac aacatgaata
    14401 atcatctaaa tacatttgat ttttttggta actttcaatg acatcttgtt tagctggtaa
    14461 gccttcccgc tgtgttaaaa gatgtgcaag tactgcaaat cgcgctctaa atttatagat
    14521 atagcataat ttggcattat cattttcaac tgttgcacca atcataaaaa tattcggata
    14581 acgggtcgat tcatcatgtg ttgttaattt aatatcttga tttgttgtcg caaataattg
    14641 ttgaacgatt ggattttttg ttgcatcaaa gccagttgct agtattggtt catgaggcgt
    14701 aagcacactt tgtccgctat caaaactgat atgatactgt ccgttgttaa aatcaatatc
    14761 tttaactgta taatgtacat tcatttcaat acgagcacct tgtttaatga cattacctag
    14821 tcgctgacgt gtataaggtg acaatctaac actaggatca gcatccggat catttaaacc
    14881 ggttgtgcta gtataaagtg cgatgtcaga gccatttttt gcaagttgat atgcagcatc
    14941 aaagccactt tcattacctc cgataaccac atattgcccc ttattaaagt tatcaaagtc
    15001 ttcaatttca ctataatgaa taccatattt aaatggcttt ttagggaaat tataatcacc
    15061 tgttgcgaca aagatataat ccgcgtgata tgtctctgtt gtcgttgcaa tcgtataata
    15121 tgcatcatct acagatatat ttgtaacaac tgtattttca aagatattca gctcgtaatg
    15181 gttggcaacc acttgtaaat attcagcata tgtttctccg gaaatatgtt cttcattaaa
    15241 tgtaaatgct ggtgaagtat ccatagaaat tgcattcata tcaggcatgc caaatccatt
    15301 agacgtaaat gatggcgtaa tcgtacgggt cgatttcggc caatgtttaa atgaatggcc
    15361 tactgttcct ttttctaaaa taatgacatc tgttataccg aaatctttta aggtaatggc
    15421 catacctata cctgcagcac cggcaccgat aatagccact ttatgatgtt gcatattaac
    15481 actccctcaa tgatctattt caagttattg ttcctgacta taaatcgtaa taattacgat
    15541 ttataaagta tagacctatc cttgagaaat ttcaatatta aaagaaaaac ttccgttatt
    15601 gtagagaatt catctacatt tcggaagttg gtatgtgtct tttttattaa atttaaagat
    15661 gctacggtta gttcaaatga ttatgaatga catttaatgg tatcatccaa cctcagtact
    15721 tggatataac attttggcgg tgagacagaa atcatatttt tacaaaattt atttcgtcgt
    15781 cccaccccaa taaagaaaaa gtatttcttt attgttgtgt aacttttcca cgttgtattt
    15841 cactatccaa attttgtttc atattatcaa acaactcttg aaatctaacc tcatcttgat
    15901 cagaataacc tttaaaaata actgaatcta tattttcctc gttaaaataa taaatttcat
    15961 cttccacaac accaatcgga tatttacatc cagaatagtc aaacatatac ttttgatttt
    16021 caatttctac aattggtcct ctattaataa tcattaactt ttgcgaacct tcttttaaat
    16081 aaataatgct tcctattgtt tccatttatt ttcctccttt gtcaccgtct caatttcaac
    16141 attccttcgc atttccaagt caatcatctc ttcttccgct ttacgaatgc catgttgaat
    16201 ttgctgttgc tgctcgtgta acgctaccgt tgaacgtcgt ttcgcaaaat gaaattcatc
    16261 gcggaactgt tccatacgac tagccatatt gctactataa taacgctcac ctaaatgttg
    16321 atataattga tctatcgaat gattaagcgc atcactttca tctatcaatg ctttaacctc
    16381 tcgcttttca tcatataagt catccatttg ctcatgtttc gctgtgatta ttttattgat
    16441 ttcatccagt ttattcgaca tcatttcacc acgttttaat ttttaccaat ttcattacca
    16501 atcattacgt cagtttggtc aaaagcctca ccaacttttt gtatattatc gctcgcagtt
    16561 cgtattgctt cagcaacaga ttgattctta ctcatcaaat catctatcac actatgagca
    16621 ttattatttc cacttactgt tgtactttca tctttatccg gtttcgacac attattacat
    16681 gtttcaacag cgcttttaat agatgatgat gcactattgg tcttaaaaat atcactttga
    16741 actgtactca tcatttacac ctcttcccat ttaaattatt ttaaaattat tagaaactgt
    16801 atcaatatat gatattcaaa cattcaataa tacttaaata ttgttttgtg attatattca
    16861 aaattattgt atcaataaat atgtatcatt cctagaattt tattaaacaa aaagttagaa
    16921 aatcactttt attgcaactc aatcttgttt tgcattatag aaattaacaa tagagattaa
    16981 aattttattt tccaacaata aaaaagcaca aatattttta ttgaggcagc tgaaggcctt
    17041 ctcattgtaa aaatatctgt gcatattatt atcttaatct aacgtaataa ctaacctgtt
    17101 gtatcttgta aaatcttatc catagagtgc gcaacactat cacggtacat ctccccaaat
    17161 ttcaataaat gcaccatcaa taaatataaa cgataaaatt caagtctata ggatgcacct
    17221 tttgcaagtg gataatgttt attatacgca tcataaaatt cgctcgtaaa accaccaaat
    17281 accgttgtaa taccgatatc aaattctctg tcaccatata atggtgctgg atcaaataac
    17341 gccggacgac catcttgtaa gaacatataa ttgccacccc ataggtcacc atgtaataaa
    17401 gacggtttac tttgatgctt ttctaattcc gccacaattt gacgtcgcac tttgtcatat
    17461 actttgatat cgttggcatc ccatagccct ctatttagca actcatcttt caaatgatcc
    17521 atgcgcttgt cgacaaaaat ggtacaccaa tcgtcttgcc aatgattatc aaaagaaata
    17581 tcgccacctt cataaggtaa tgagaagcca aatttgcctt cttcttgttg ctgactgtgt
    17641 aattgagcta cgagttgccc taattggcgt tgactccctg aagccccttc ttctaaatac
    17701 gtcatcacta aatacgcatc accgttaacc tcgccacttg caattactct aggtgccgtg
    17761 atacctgcac gttcaaattc atttaaacct gcaatttctg cagcataaaa tgattcttta
    17821 cgtccacgtt ggacaagtaa gaaaaatgta tccgtatccg tttcgactcg atatgcttcg
    17881 tttacatcgc caccactcac tggtgaaatc tctttaatat cttttaaagg taaatgctct
    17941 aaccattgtt cattcataca aacaccttcc attacgctta ctttatacta ttatattgcc
    18001 taattaagat gatttaatct caattttatt tgtggtactt gcgtcaattt tcaaaacttt
    18061 ttagttttaa ctaggaaatt atgtagggaa atgctagtct attaaaagaa tatatttcac
    18121 atatattaag ttgaggatag taagcctcaa atataatgaa ataggagcat actcatgtac
    18181 aaattaatta aacctttctt attcaaaatc gaacccgaaa aagcacacgg actaactatc
    18241 gatgcattaa aaacgttaca aaaatttccg gttttattcc cagtcgtcga taaactattt
    18301 acttataaga atccaacgtt atcacaaacg atacaaggta atacgtacga caatccaatt
    18361 ggcttagcag ctggtttcga caaatcttgc gaagtaccaa aagcattgga acaccttgga
    18421 ttcggtgctt tagaattagg tggtatcaca cctaaacctc aaccgggtaa ccctcaacca
    18481 cgcatgttca gattattaga agatgatgcc ttgataaatc gtatgggctt caataatatt
    18541 ggtatgaaca aagcactcag tcatttgcgt aaaaatgctt atcaagtacc tgttggtatc
    18601 aatgttggtg tgaataaaat gacaccttat gaagcgcgtt atcaagatta tataaaagtc
    18661 attgatacgt ttaaacacga cgtttcattt ttcacagtca atatcagttc tccaaatact
    18721 gaaaatcttc aaaacttcca tgataaagat gaattttcaa tgttatgcca agctttaaca
    18781 gcatttaaaa aacaacatga tgtaacagtg ccaatttatt taaaactaac gtctgatatg
    18841 gatttcgatg gcttaaaagc actattacca gcgattactg agacatttga cggtatcatc
    18901 ttagcaaaca caacgcgaca acgagatggt ttaacttctg ctaataaagt cgaagaaggc
    18961 ggtttgagtg gtcgttcatt atttgaacgt aatttaaaat tgattaagta tgcttatcag
    19021 caaacaaatg gtgaattttt aattataggt acaggcggcg tattcagtac tgaagatgca
    19081 atcaaaatga tgcgtcacgg tgcgtcactt attcaaattt attcatcact tgttattgaa
    19141 ggcccaggtt taactaagaa aatgaacaaa ggcatcgcac gttacttaaa agatcatcat
    19201 tttgacaatg tcagtgatat tataggacta gatgcctaat ccaacgtagt caaataatac
    19261 tttaaaactt gctgaatcgt cttattaaaa ttatgatata actcaagaag atatatttat
    19321 caccattttt caaaataatg gcttaaatat cacatatcat taaatatagc gttttataac
    19381 ggaggcgttt gttatgacta aagaaacaga taataaaaaa acagtagcga cttctgacaa
    19441 caaagacaca cagcaacaaa atcaacctga agaagatgaa cgtcaaggtt tgaatggtta
    19501 tcgtaaaaca gatcttgatt tagaaattga gcaagagcta cgtgaaatga tgaaaacagg
    19561 agaaaatgaa acgaaaaatg actacaaaaa gtttaaagtg ttttcactta tttcaacact
    19621 tgtcattgtc attttagcaa ttataagatt tgttcataaa atgatgtaat tagagtgaga
    19681 cattgtttta tgtctcagga tccagttatt tattatagct acaatattta cgatgatata
    19741 aataacccga gattttagta tgattcattt cactaaagtc tcgggtttct atttgataat
    19801 ttttaatagg gcatggcttg tatatgcgcc tgccttttat ctcatttcca atgattaatc
    19861 tggatattgt tctaaaaatg ctttcgcttc tttattaact gttttaaaat caataccttg
    19921 ttgcatcgct gcaaagacac atccacaata acactgccta aagatattat agtcattaca
    19981 catttctatg gaacgctcat aacctttact tttcttaaaa tcacttggca aatagttcac
    20041 atcgtatatt ttttggacat ccataccaag ttcattgatt aattgtgcgt tctttttagg
    20101 tgataatgta attgcactgc caaaataatc atagccatgt tctacagctg ctttcgctac
    20161 aatatccaaa cgcatttcaa aacaagcggt acaacgtaag ccgccttctt tttcatcagc
    20221 taattcttta tccttcacca ttttcacaaa cttatgcggt tcataaggtg cttcaatata
    20281 cttcacattc gcaccagtct tgcgattaaa atcttctaca aattgttctt gcactttagc
    20341 acgtcgtaaa tattcatttt tcggatgaat atttgaattc gcgaaataaa ttgcaatgtc
    20401 tgcatattgt gttaaaaact ctaatgtata tgtactacaa ggtgcacaac aactatgcaa
    20461 taagatttta ggtctgattg cttctctttc ccactgcccg attaatttct tcaacacctt
    20521 gtcataatta attttttgat ttttcatttt actgataata ggttcagcat taatcatgat
    20581 ttaacctc
//
LOCUS       DAKPJH010000043        20324 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.043, whole genome shotgun sequence.
ACCESSION   DAKPJH010000043 DAKPJH010000000
VERSION     DAKPJH010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20324
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.043"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            236..727
                     /gene="lspA"
                     /locus_tag="OY092_001305"
     CDS             236..727
                     /gene="lspA"
                     /locus_tag="OY092_001305"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HCX1076256.1"
                     /translation="MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHF
                     LNITSHRNNGAAWGILSGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAG
                     ALGNFIDRILTGEVVDFIDTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEK
                     EVK"
     gene            727..1644
                     /locus_tag="OY092_001306"
     CDS             727..1644
                     /locus_tag="OY092_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HCX1076257.1"
                     /translation="METYEFNITDKEQTGMRVDKLLPELNSDWSRNQIQDWIKAGLVV
                     ANDKVVKSNYKVKLNDHIVVTEKEVVEADILPENLNLDIYYEDDDVAVVYKPKGMVVH
                     PSPGHYTNTLVNGLMYQIKNLSGINGEIRPGIVHRIDMDTSGLLMVAKNDIAHRGLVE
                     QLMDKSVKRKYIALVHGNIPHDYGTIDAPIGRNKNDRQSMAVVDDGKEAVTHFNVLEH
                     FKDYTLVECQLETGRTHQIRVHMKYIGFPLVGDPKYGPKKTLDIGGQALHAGLIGFEH
                     PVTGEYIERHAELPQDFEDLLDTIRKRDA"
     gene            2044..2571
                     /gene="pyrR"
                     /locus_tag="OY092_001307"
     CDS             2044..2571
                     /gene="pyrR"
                     /locus_tag="OY092_001307"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HCX1076258.1"
                     /translation="MSERIIMDDAAIQRTVTRIAHEILEYNKGTDNLILLGIKTRGEY
                     LANRIQDKIHQIEQQRIPTGTIDITYFRDDIEHMSSLTTKDAIDIDTDITDKVVIIID
                     DVLYTGRTVRASLDAILLNARPIKIGLAALVDRGHRELPIRADFVGKNIPTSKEETVS
                     VYLEEMDQRNAVIIK"
     gene            2789..4096
                     /locus_tag="OY092_001308"
     CDS             2789..4096
                     /locus_tag="OY092_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HCX1076259.1"
                     /translation="MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLV
                     PFLTGLPISAALLASGIGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLV
                     ALFMSGVMYVIIGILIKLSGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPG
                     DMKGYNISFLIVAMITLLVTIVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAI
                     MSAKWIDFPHIYLPFKDYVPSFHLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFE
                     KPGLDKSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLA
                     FIGKFTALISSIPTPVMGGVSILLFGIIAASGLRMLVESKVDFANNRNLVIASVILVV
                     GIGNLVFNLKEIGINLQIEGMALAALSGIILNLILPKEKKQNN"
     gene            4124..5005
                     /locus_tag="OY092_001309"
     CDS             4124..5005
                     /locus_tag="OY092_001309"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HCX1076260.1"
                     /translation="MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLF
                     FENSTRTKCSFEMAELKLGLKTISFETSTSSVSKGESLYDTCKTLESIGCDLLVIRHP
                     FNNYYEKLANINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSR
                     VARSNYHSLKALGANVMFNSPNAWIDDSLEAPYVNIDDVIETVDIVMLLRIQHERHGL
                     AEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQ
                     MENGVYLRMAVIDELLK"
     gene            5023..6297
                     /locus_tag="OY092_001310"
     CDS             5023..6297
                     /locus_tag="OY092_001310"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HCX1076261.1"
                     /translation="MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIID
                     AKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEH
                     FEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMM
                     YEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLL
                     AEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMN
                     PPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLY
                     THFVKNGDWTLQQLVDYLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFL
                     SKADNTPFIGYKVYGNPILTMVEGEVKFEGDK"
     gene            6299..7399
                     /gene="carA"
                     /locus_tag="OY092_001311"
     CDS             6299..7399
                     /gene="carA"
                     /locus_tag="OY092_001311"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HCX1076262.1"
                     /translation="MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETIS
                     DPSYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVL
                     ELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVS
                     TKTPYVSTGKDLSVVLVDFGKKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVML
                     SNGPGNPEVVECAIPMIQGILGKIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPV
                     KNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHP
                     EANPGPSDSNYLFDDFVAMMTNFKEKERHINA"
     gene            7392..10565
                     /gene="carB"
                     /locus_tag="OY092_001312"
     CDS             7392..10565
                     /gene="carB"
                     /locus_tag="OY092_001312"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HCX1076263.1"
                     /translation="MPKRNDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRV
                     ILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQL
                     HESGVLQDNNVQLLGTELTSIQQAEDREMFRTLMNDLNIPVPESDIVNTVEQAFKFKE
                     QVGYPLIVRPAFTMGGTGGGICHNDEELHEIVSNGLHYSPATQCLLEKSIAGFKEIEY
                     EVMRDKNDNAIVVCNMENIDPVGIHTGDSIVVAPSQTLSDVEYQMLRDVSLKVIRALG
                     IEGGCNVQLALDPHSFDYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     LNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEES
                     LLKAIRSLEYGVHHLGLPNGESFDLDYIKERISHQDDERLFFIGEAIRRGTTLEEIHN
                     MTQIDYFFLHKFQNIIDIEHQLKEHQGDLEYLKYAKDYGFSDKTIAHRFNMTEEEVYQ
                     LRMENDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIVTDKEKILVLGSGPIRIGQ
                     GVEFDYATVHAVWAIQKAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINL
                     EKPKGVVVQFGGQTAINLADKLAKHGVKILGTSLENLNRAEDRKEFEALLRKINVPQP
                     QGKTATSPEEALANAAEIGYPVVVRPSYVLGGRAMEIVDNDKELENYMTQAVKASPEH
                     PVLVDRYLTGKEIEVDAICDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLTEDELA
                     TLEDYTIKLAKGLNIIGLINIQFVIAHDGVYVLEVNPRSSRTVPFLSKITDIPMAQLA
                     MRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTGEVMGKD
                     TTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTAN
                     KLAEYDIPAEVVGKIGGENDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENG
                     IPCLTSLDTANALTNVIESMTFTMRQM"
     gene            10675..11367
                     /gene="pyrF"
                     /locus_tag="OY092_001313"
     CDS             10675..11367
                     /gene="pyrF"
                     /locus_tag="OY092_001313"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HCX1076264.1"
                     /translation="MKDLPIIALDFESKEKVNQFLDLFDESLFVKVGMELFYQEGPQL
                     INEIKERGHDVFLDLKLHDIPNTVGKAMERLAKLNVDLVNVHAAGGVKMMSEAIKGLR
                     KHNQHTKIIAVTQLTSTTEDMLRHEQNIQTSIEEAVLNYAKLANAAGLDGVVCSPLES
                     RMLTEKLGTSFLKVTPGIRPKGASQDDQHRITTPEEARQLGSTHIVVGRPITQSDNPV
                     ESYHKIKESWLV"
     gene            11367..11978
                     /locus_tag="OY092_001314"
     CDS             11367..11978
                     /locus_tag="OY092_001314"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HCX1076265.1"
                     /translation="MAKEIAKSLLDIEAVTLSPNDLYTWSSGIKSPIYCDNRVTLGYP
                     LVRGAIRDGLINLIKEHFPEVEVISGTATAGIPHAAFIAEKLKLPMNYVRSSNKSHGK
                     QNQIEGAKSEGKKVVVIEDLISTGGSSVTAVEALKQAGAEVLGVVAIFTYGLKKADDT
                     FSNIQLPFYTLSDYNELIEVAENEGKISSEDIQTLVEWRDNLA"
     gene            12008..12220
                     /locus_tag="OY092_001315"
     CDS             12008..12220
                     /locus_tag="OY092_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076266.1"
                     /translation="MNDKTSNDLYGKIKHCNEFINHSNDSNLSSSHDVDESSTKQKHI
                     KNKTTIDHNDDLFKHVKDILRKQGQI"
     gene            12657..13058
                     /locus_tag="OY092_001316"
     CDS             12657..13058
                     /locus_tag="OY092_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076267.1"
                     /translation="MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPG
                     DPGTVQHSIFTLNGQVFMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGA
                     ILMPKTNMPPYREFAWVQDKFGVSFQLALPE"
     gene            complement(13321..15018)
                     /locus_tag="OY092_001317"
     CDS             complement(13321..15018)
                     /locus_tag="OY092_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HCX1076268.1"
                     /translation="MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQN
                     HQLLLSIHPNFSRLQLTTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEID
                     IKSKDEIGDTIYRTVILEIMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNY
                     EAPPTQHKMNPYDITGAEVLKYIDFNAGNIAKQLLNQFEGFSPLITNEIVNRRQFMTS
                     STLPEAFDEVMAETKLPPTPIFHKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRF
                     YDARGERERVKQRANDLVRFVQQQLHKYQNKLAKLIEEYEQSKNKDTEQLYGELITAN
                     IYRIKQGDKEVTALNYYTNEEVVIPLNPTKSPSANAQYYYKQYNRMKTRERELQHQIQ
                     LTKDNIDYFSTIEQQLHHISVHDIDEIRDELAEQGFMKQRKNQTKKKKAQIQLQHYVS
                     TDGDDIYVGKNNKQNDYLTNKKAKKTHTWLHTKDIPGSHVVIFNDAPSDTTIKEAAML
                     AGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPGFVTYDNQKTLYATPDYELIQKMKQS"
     gene            15293..15916
                     /gene="gmk"
                     /locus_tag="OY092_001318"
     CDS             15293..15916
                     /gene="gmk"
                     /locus_tag="OY092_001318"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HCX1076269.1"
                     /translation="MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQ
                     MREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFL
                     EIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESDEKIQSRINEARKEVEM
                     MNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK"
     gene            15916..16134
                     /locus_tag="OY092_001319"
     CDS             15916..16134
                     /locus_tag="OY092_001319"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HCX1076270.1"
                     /translation="MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHS
                     FKPVGRALEEIADGKIRPVISSDYYGKE"
     gene            16350..17549
                     /gene="coaBC"
                     /locus_tag="OY092_001320"
     CDS             16350..17549
                     /gene="coaBC"
                     /locus_tag="OY092_001320"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HCX1076271.1"
                     /translation="MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVT
                     PLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDL
                     VTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKG
                     RMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMG
                     YAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAA
                     AVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENY
                     AQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILD
                     ELETRWQ"
     gene            17549..19957
                     /gene="priA"
                     /locus_tag="OY092_001321"
     CDS             17549..19957
                     /gene="priA"
                     /locus_tag="OY092_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HCX1076272.1"
                     /translation="MIAKVIVDVASKSVDFKFDYIIPEQLESVIQPGVRVIVPFGPRT
                     IQGYVMEVTAEPDAQLDVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISMLE
                     VMLPSAIKAKYKKAFKMKDDIELPSALLQKFDKHGYYYYKDAQKNNDIQLLMKLLKDD
                     IVEEKTILTQNITKKTKRAVRVIEGYHPDEVLAKLEKVIKQYDLYAYLSEEQHKTIFL
                     TDIEDMGFSKSSLDGLIKKGYVEKYDAVVDRDPFKDRVFEQESKQQLTEDQYKAYEAI
                     KAKIVSQEQETFLLHGVTGSGKTEVYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFK
                     RRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSVFAPFKNLGLIIIDEEHE
                     STYKQEDYPRYHAREIAQWRSEYHHCPVILGSATPCLESYARAEKGVYHLLSLPNRVN
                     QQALPEIDIVDMREELSEGNRSMFSKDLREAIQLRLDRQEQVVLFLNRRGYASFMLCR
                     DCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQETPPNQCPNCESEHIRQVGTGTQKVE
                     ELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFEKGNGDILLGTQMIAKGLDYPNITL
                     VGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHEKAGQVIIQTYNPDHYSILDVQK
                     NDYLTFYRQEMEYRKLGKYPPYYYLINFTISHKEMKKVMEASQHVHKILLQHLTEKAL
                     VLGPSPAALARINNEFRFQILVKYKSEPGLLQAIQFLDDYYHEKFIKEKLALKIDIDP
                     QMMM"
BASE COUNT         7184 a         2950 c         3824 g         6366 t
ORIGIN      
        1 cagctttttt aaattgccta agaacttaat gtcccagcct gtttcctaat ttttaatgtc
       61 atcttaaata tgataaatga ataattaagt tcatatttaa tgtcaaaaca tagtagttta
      121 tcaagtattg agttagtaac attagattta atgtaatatg cttacttttt ttattagcag
      181 gtgtaagcta taatataaag agttgtctca tggacgattg attggaggaa cgaaaatgca
      241 caaaaaatat tttattggca cttccatttt aatagcagta tttgtcgtta tatttgacca
      301 agttactaaa tatattatag ctactacaat gaaaattgga gattcatttg aagtgatacc
      361 gcacttttta aacataacat cacatcgaaa taatggtgct gcatggggaa tattgagtgg
      421 aaaaatgaca tttttcttta ttattaccat tattatatta atagccttag tatatttctt
      481 tattaaagat gctcaatata atttgtttat gcaagttgct attagtttac tttttgcagg
      541 tgcacttgga aactttattg atagaatttt aacaggagaa gttgttgact ttattgatac
      601 aaatattttt ggttatgatt ttccaatatt taatatcgca gattcaagtt taacaattgg
      661 tgtaatatta attattattg ccttattaaa ggatacttcc aataaaaagg agaaggaggt
      721 taagtaatgg agacttatga atttaacatt acagataaag aacaaacagg tatgcgtgta
      781 gataagttgc tgcctgaatt aaatagtgat tggtctcgta accagataca agattggatt
      841 aaagcaggtt tagtcgttgc aaacgataaa gttgttaaat ctaattataa agtgaaactt
      901 aatgatcata tagttgtcac tgaaaaagaa gtggttgaag ctgatattct acctgaaaat
      961 ttaaatttag atatttatta tgaagatgac gatgttgcag ttgtatataa accgaaaggc
     1021 atggtagttc atccatcacc agggcattat accaatacat tagttaatgg tttaatgtat
     1081 caaattaaaa atttgtcagg tattaatgga gaaattcgtc caggtattgt tcaccgtata
     1141 gatatggata cttctggttt attaatggtt gctaaaaatg atattgctca tcgtgggctt
     1201 gtagaacaat taatggataa atctgttaaa agaaaatata tcgctttagt tcacgggaat
     1261 attcctcatg attacggtac aatcgatgcg ccaattggta gaaacaaaaa tgatcgtcaa
     1321 tctatggctg ttgttgatga tggtaaggaa gcagtgacac attttaacgt actagaacat
     1381 tttaaagatt atacgcttgt tgaatgtcaa cttgaaacag gacgtacgca tcaaatccgt
     1441 gtgcacatga aatatattgg cttcccatta gttggtgatc caaagtatgg accgaaaaag
     1501 acattggata ttggtggtca agctctacat gctggactta ttggattcga acatccagta
     1561 acaggtgaat atattgaaag acatgctgaa ttaccacaag actttgaaga tttattagat
     1621 acaattcgaa aaagagatgc ataattgtgt tgtgctataa ttacgataac attattatgt
     1681 aaactataag tatttatcgt tttcgttttt ttaaaatgaa aacacattat aaaatagatt
     1741 aaggttaaca tttttactta gatcggttaa tttttcaata tagattgaca aagcgcctga
     1801 ttagtattat ccttataaca gtttaagtac aacataaaga gtctttaatt gagcgtccag
     1861 agagacgtca aagacatgaa aatatagata tatactaaaa tgatcataac actttcacat
     1921 atgcaagaat aagtagtaat actacgattc ttctatgtat ataggctgat tgtatatact
     1981 aaacctcatg tcgatattaa agacatgagg ttttttgttt ctaaattttg aaagggtgag
     2041 aatatgtctg aacgtatcat aatggatgat gccgcaatac aacgtacagt gacgagaatc
     2101 gctcatgaaa ttttggagta taacaaaggt actgataatt taattctttt aggtatcaaa
     2161 acaagaggtg aatatttagc gaatcgtata caagataaaa ttcatcaaat tgagcaacaa
     2221 cgtataccta ctggaacaat tgatattaca tactttagag atgatataga gcacatgtca
     2281 tcacttacga caaaagacgc aatagacatc gacacagata ttacagataa agtagtcatc
     2341 attattgacg atgtgctgta tactggtcga acggttcgtg cttcacttga tgctattttg
     2401 ctaaatgcta gacctattaa aattggttta gctgctttgg ttgatcgagg acatcgtgag
     2461 ttaccaattc gagcagattt tgttggtaaa aatataccta cttctaaaga ggaaacggta
     2521 agtgtctatt tagaagaaat ggatcaaaga aatgcagtta taattaaata ataccccttt
     2581 taattcagta cgagagactg aaaaaggtgg gggagttgaa tgataaataa gttttcatat
     2641 gcttgtttat ctaataatac cctcatgttc gacaactata agtcaatttc tatggacgaa
     2701 aatgacttgt agcaacttgt cacacttttt gtctctttac atatactgat gtaaagagat
     2761 ttttttatta tcggaggaaa tgaatattat gcaaaatgat gaaatgtttg aacgaacagt
     2821 aaaacccgta ctagatgtaa atgaaaaacc acaaccagcg caatgggcat ttttaagctt
     2881 acaacattta tttgcgatgt ttggcgcaac agtactagta ccattcttaa caggactacc
     2941 aatatcagca gcgttactag cttcgggaat cggtacatta ctttatatct taataacgaa
     3001 ggcgcaaata ccagcatact tgggatctag ctttgcattt atcacaccaa ttatcacggg
     3061 attaagtacg catagcttag gagacatgct tgtagcatta ttcatgagtg gtgttatgta
     3121 cgtcatcatc ggaattctaa tcaaattaag tgggacagca tggttaatga aattattacc
     3181 accagttgtt gttggaccag tcatcatggt aattggttta agcttagcgc ctactgcagt
     3241 caatatggca atgtatgaaa atcctggaga tatgaaaggt tacaatatca gtttcttaat
     3301 tgttgcaatg ataaccttgc ttgtaacaat agtcgttcaa ggttttttta aaggattcct
     3361 atctttaatt ccagttcttg taggtattat cgtaggttat gtggtagcga tttttatggg
     3421 gattgtgaaa tttgatgcaa ttatgtcagc aaaatggata gatttccctc atatttatct
     3481 gccatttaaa gattatgtac cttcatttca cttaggactt gtacttgtaa tgattccgat
     3541 tgtgttcgta acagtaagtg aacatattgg gcaccaaatg gtactgaata aaatcgtagg
     3601 tagaaacttc tttgaaaagc caggacttga taaatcaatc attggtgatg gtgtttctac
     3661 aatgtttgcc agtattattg gtggaccacc aagtacaaca tacggtgaaa atatcggtgt
     3721 attagcgatt accagaatat acagtattta cgtcattggt ggtgcagcag ttatagcaat
     3781 tgttttagca ttcattggta agttcactgc attaatttct tctataccta caccagttat
     3841 gggaggagta tctatattac ttttcggtat tattgcagca agtggcttaa gaatgttagt
     3901 tgaaagcaaa gtagattttg cgaacaatcg aaatttagtt atagcttcag taattttagt
     3961 tgtaggtatc ggtaatttag tatttaactt aaaagaaatt ggtatcaacc ttcaaattga
     4021 ggggatggca ttagctgcac tttcaggaat tattttgaac ttaatcttac ctaaagagaa
     4081 aaaacaaaac aattaagatt tacaaattaa ggagggcgct tttatgaatc atttattatc
     4141 aatggaacat ttatctacag atcaaatata caaacttatc caaaaggcaa gtcaatttaa
     4201 atctggtgaa cgtcaactac caaactttga agggaaatat gtcgcaaatt tattctttga
     4261 aaattctact cgaacaaaat gtagttttga aatggcagaa cttaagctag ggttaaaaac
     4321 gattagcttt gaaacatcaa catcatctgt ttcaaaaggt gaatctttat atgacacatg
     4381 taaaacttta gaaagtattg gctgtgattt attagtcatt agacatccgt ttaataacta
     4441 ctatgaaaaa ttagcgaata ttaacatccc aattgcgaat gctggtgatg gtagtggaca
     4501 acatccaaca caaagtttac ttgatttaat gacgatatat gaagaatatg gatattttga
     4561 aggcttgaat gtattgattt gtggagacat taaaaattca cgtgtcgcac gtagtaatta
     4621 ccatagttta aaagcattag gtgcaaacgt aatgtttaat agcccaaatg cttggattga
     4681 tgattctcta gaagcacctt atgtaaatat agatgatgtt atagaaacag tggatatagt
     4741 tatgttatta agaattcaac atgaaagaca tgggcttgca gaagaaacta gatttgcagc
     4801 agatgattat catcaaaagc atggcttaaa tgaagtgcgc tataacaaat tacaagaaca
     4861 tgctattgtt atgcatccgg cacctgtgaa tagaggagta gaaatacaaa gcgatttagt
     4921 agaagcttca aaatcaagaa tttttaagca aatggaaaat ggcgtttact taagaatggc
     4981 agtcattgat gaattattaa aataggtaag gggacgaaaa tgatgaaatt aattaaaaac
     5041 ggtaaagtat tacaaaatgg cgaattacaa caagcagata ttttaattga tggtaaggta
     5101 attaaacaaa ttgcacctgc aattgaacca agcaatggtg ttgacatcat agatgcgaaa
     5161 ggtcactttg tgtcacctgg atttgtcgat gttcatgttc atttacgcga acctggtggt
     5221 gaatataaag agacaattga aactggtact aaagctgctg ctagaggcgg atttacaact
     5281 gtatgtccaa tgcctaacac aagaccggta ccagattctg tagaacattt tgaagcttta
     5341 caaaaattaa tcgatgacaa tgctcaagta cgtgtattac cttatgcttc aattacaaca
     5401 cgtcaattag gtaaagaatt ggttgatttc ccagcactag taaaagaagg tgcctttgcg
     5461 tttacagatg acggtgtagg agtacaaact gcaagcatga tgtatgaagg catgattgaa
     5521 gctgcaaaag taaacaaagc catcgtagca cactgtgaag ataattcatt aatctatggt
     5581 ggtgcaatgc atgaagggaa acgcagtaaa gagttaggta taccaggtat tccaaacatt
     5641 tgtgaatctg ttcaaatcgc aagagatgta ctattagctg aagcagcagg ttgtcattat
     5701 catgtatgtc atgtttctac taaagaaagt gttagagtca ttcgtgacgc taaacgcgca
     5761 ggtattcatg ttacagctga agttacacca caccatttat tattaacaga agatgatatt
     5821 cctggtaaca atgccattta taaaatgaat ccaccattga gaagtactga agatagagag
     5881 gctttgttag aagggttact agacggtaca attgactgta tcgcaacaga ccatgcacca
     5941 catgcacgtg atgaaaaagc gcaaccaatg gaaaaagcac cattcggaat agttggtagt
     6001 gaaacagcat tcccattatt atatacgcat tttgtaaaaa atggtgattg gacattacaa
     6061 caattagtag attacttaac aattaaacca tgtgagacat ttaatttaga atacggcaca
     6121 ttaaaagaaa atggttatgc agatttaaca atcattgatt tagatagtga acaagaaatt
     6181 aaaggagaag atttcttatc aaaagcagat aatacaccat ttatcggcta taaagtttat
     6241 ggaaatccga tcttaacaat ggttgaaggc gaagttaaat ttgaggggga taaataatat
     6301 gcaaagcaaa cgttatctag tgttagaaga cggttctttt tacgaaggct accgtttagg
     6361 atctgataac ttaactgtag gagaaattgt atttaataca gcgatgacag gttatcaaga
     6421 aactatttct gatccatcat atacaggtca gatcattact tttacgtatc cattaatcgg
     6481 taattatggt atcaatagag acgattttga atcattagta cctacattaa acggtattgt
     6541 agtgaaagaa gcgagtgcgc atccaagtaa ttttagacag caaaagacac ttcatgacgt
     6601 tttagaattg catcaaattc cagggattgc aggtgttgat acaagaagta ttacgcgtaa
     6661 aattcgacaa cacggtgtgt taaaagctgg ttttactgat cgaaaagaag atattgatca
     6721 acttgtcaaa catttacaac aagtagaatt acctaaaaac gaggtagaaa tcgtttcgac
     6781 taaaacaccg tatgtttcga caggtaagga tctaagtgtc gtacttgtag actttggtaa
     6841 gaagcaaaat attgttcgag aattaaacgt cagaggttgt aacgtcacag ttgtaccata
     6901 tacaactact gccgaagaaa ttttagcaat ggctccagat ggcgttatgc tatcaaacgg
     6961 accaggtaat cctgaagttg tagaatgtgc gattccaatg attcaaggaa ttttagggaa
     7021 aattccgttc tttggtatct gtctaggaca tcaacttttt gcattatctc aaggagcaag
     7081 ctcatttaaa atgaagtttg gtcatcgtgg tgcgaaccat ccagttaaaa atttagagac
     7141 tggaaaagtt gatattacga gtcaaaacca tggatatgca atagatatag attcgttaaa
     7201 aagtactgat ttagaagtta ctcatcttgc attaaatgat ggtactgtag aaggtttaaa
     7261 acataaaaca ttaccagcat tttctgttca ataccatcct gaagcaaatc caggaccgtc
     7321 agattcaaac tatctatttg atgattttgt agcaatgatg actaatttta aggaaaagga
     7381 gcgtcatatc aatgcctaaa cgtaatgata tcaaaacaat tttagtaata gggtctgggc
     7441 caattatcat aggtcaagca gctgaatttg attatgctgg aacacaagca tgtctagctt
     7501 taaaagaaga gggataccga gttattcttg taaattcaaa tccagcgaca atcatgactg
     7561 ataaggaaat tgcggataaa gtatatatcg aaccgttaac tcatgatttt atagcgcgaa
     7621 ttatacgtaa agagcaacct gacgctttac ttccaacttt aggtggtcaa acaggtttaa
     7681 acatggcgat tcaactacac gaaagtggtg tgcttcaaga taataacgtc caattattag
     7741 gaactgagct aacatcaatt caacaagcag aagaccgtga aatgtttaga acattaatga
     7801 atgatttaaa cattcctgta ccagagagtg acattgtaaa tacagtagag caagccttta
     7861 aattcaaaga gcaagtggga tacccgctaa ttgttagacc ggcatttacg atgggtggta
     7921 ccggaggcgg tatttgtcat aatgatgaag aattacatga aatcgtctca aatggtcttc
     7981 attatagtcc agcaacgcaa tgtttattag aaaaatctat cgcaggtttt aaagaaatcg
     8041 aatacgaagt aatgcgtgat aaaaacgata atgccatcgt tgtatgtaac atggaaaata
     8101 ttgatccagt tggtattcat acaggcgatt caattgttgt ggctcctagc caaacattat
     8161 cagatgttga gtatcaaatg ttacgtgatg tttcattaaa agttattcga gctttaggta
     8221 tcgaaggtgg ttgtaatgtt caattagcat tagatcccca ttcattcgat tattatatta
     8281 tagaagtaaa tccacgtgta tcacgttcat cagcgttagc ttcaaaagca acaggatatc
     8341 ctattgcaaa attagctgct aaaatcgcgg ttggtctaac attagatgaa atgttaaatc
     8401 caattacagg aacatcttat gcagcgtttg aaccaacttt agactatgtg atttcaaaaa
     8461 taccaagatt tccttttgat aaatttgaaa aaggagaacg agagcttggc acacaaatga
     8521 aagcaacagg tgaagttatg gccattggtc gaacttacga agaatcattg ttaaaagcaa
     8581 ttcgatcact tgagtatggt gtgcatcact taggattacc aaatggtgaa agcttcgatc
     8641 ttgattatat taaagaacgt atttcacacc aagatgatga acgattattt ttcatcggcg
     8701 aagcaattag aagaggcaca acattagaag aaattcataa tatgactcag attgattact
     8761 tcttcttaca caagttccaa aacattattg atattgagca tcaattaaaa gaacatcaag
     8821 gtgatttaga atatcttaaa tatgcaaaag attatggatt tagtgataaa acaatagcgc
     8881 atcgctttaa tatgacagaa gaagaagtat atcaattgcg tatggaaaat gatattaaac
     8941 ctgtttacaa gatggttgat acttgcgcag ctgaatttga atcttcaaca ccatattatt
     9001 atggtacata cgaaactgaa aatgaatcca tagttactga caaagaaaaa atcttagtat
     9061 taggctctgg accaattcga atcggccaag gtgtagaatt tgactatgcg acagttcacg
     9121 ccgtttgggc aattcaaaaa gcagggtacg aagcgataat tgtgaataac aatccagaaa
     9181 cagtttcaac agacttctca atttctgaca aattatactt tgaaccttta actgaagaag
     9241 atgtgatgaa tatcattaat ttagaaaaac ctaaaggtgt cgttgtacaa tttggaggac
     9301 aaacagcgat taatttagca gacaaattgg ctaaacatgg tgttaaaata cttggtactt
     9361 cactagaaaa tctaaatcgt gctgaagata gaaaagaatt tgaagcacta ttaagaaaaa
     9421 ttaacgtgcc acagccacaa gggaaaacag ctacatcacc tgaggaagca ttagcgaatg
     9481 ctgcagaaat cggatatccg gttgtagtaa gaccttctta tgtattaggt ggtcgcgcaa
     9541 tggaaattgt agacaatgac aaagagttag aaaactatat gacccaggct gtaaaagcga
     9601 gtccggaaca tccggtacta gtcgatagat atttaactgg taaagaaatt gaagttgatg
     9661 cgatttgtga tggagaaacg gtcattattc caggaatcat ggaacatatt gaacgtgctg
     9721 gtgtgcatag tggtgactca atcgctgtat atccgccaca aactttgaca gaagacgagt
     9781 tagcaacact tgaggactat actataaaat tagctaaagg tttaaacatc attggcttaa
     9841 tcaacattca attcgttata gctcacgatg gtgtgtatgt tttagaagta aatccacgtt
     9901 ctagtagaac ggtaccattc ttaagtaaaa ttactgatat tccaatggca caattagcta
     9961 tgcgagcaat cattggggaa aaactaacag atatggggta tcaagaaggg gttcaaccat
    10021 atgctgaggg tgtatttgtg aaagcaccgg tatttagttt taataaattg aaaaatgttg
    10081 atattacttt aggacctgaa atgaagtcta caggtgaagt aatggggaaa gatactacat
    10141 tagaaaaggc gttattcaaa gggttaacag gtagtggtgt tgaagttaaa gatcacggta
    10201 cagtattaat gaccgtcagt gacaaagata aagaggaagt tgttaaattg gcacaacgct
    10261 taaatgaagt tggctataaa attttagcaa cgtctggaac agctaataaa ttagctgagt
    10321 atgacatacc tgcagaagta gtaggcaaaa ttggtggcga aaacgattta ttaacacgta
    10381 ttcaaaatgg tgatgttcaa atcgttataa atacaatgac taaaggtaaa gaagtagaaa
    10441 gagatggctt ccaaattaga cgtactacag ttgaaaatgg tattccatgt ttgacatctt
    10501 tagatacagc taatgcctta acgaatgtaa ttgaaagtat gacatttaca atgcgtcaaa
    10561 tgtaaatcaa tcaaactgta tcggtggggc tgtaattaac catttactta aagaagttta
    10621 tattacagcc tcattatttt aatgaattgc ttaacgtaaa gggagacata tatgatgaaa
    10681 gatttaccaa ttattgcatt agattttgaa tcaaaagaaa aagtaaatca atttttagat
    10741 ttatttgatg aatcattatt cgtaaaagta ggtatggaac ttttttatca agaaggccct
    10801 caattaatta atgagataaa agaaagaggc catgatgtat ttttagattt aaagctgcat
    10861 gatattccta atacagttgg taaggcgatg gaaagactag ctaaattgaa tgttgatctg
    10921 gtaaatgttc atgctgctgg tggtgtaaaa atgatgtctg aggccattaa aggattaaga
    10981 aaacataatc aacatacaaa aattattgca gtaacacagc ttacgtcaac aacagaagat
    11041 atgttacgac acgaacaaaa tatacaaaca tcgattgaag aggccgtttt aaattatgcc
    11101 aagttagcaa atgcagctgg tttagatggc gttgtttgtt cacctcttga aagtcgtatg
    11161 ttgactgaaa agttaggtac atcattttta aaagtaacac caggtattag acctaaaggt
    11221 gcatctcaag atgaccaaca ccgtattacg acaccggaag aagcaagaca gcttggttcg
    11281 acgcatattg tagtcggtag accgattaca caaagtgaca atccagtcga aagttatcat
    11341 aaaattaaag aaagttggtt agtataatgg ctaaagaaat tgcaaaatca ttattagata
    11401 ttgaagctgt aacattatca ccaaatgatt tatatacatg gagttcaggt attaaatcac
    11461 cgatttactg tgataaccgt gttacgttag gttatccttt agttcgaggc gcaatccgcg
    11521 atggtttaat taacttaatt aaagaacact ttcctgaagt agaagttatt tctggtactg
    11581 caacagctgg tattccacat gcagctttta ttgctgaaaa attaaaatta ccaatgaatt
    11641 atgttcgttc atcaaataag agtcatggta agcaaaatca aattgaaggt gctaaaagtg
    11701 aaggtaaaaa agtagttgtg atagaagatt taatttcgac agggggatct tcagtcacag
    11761 cagttgaagc cttaaaacaa gcaggtgcag aagtattagg tgttgtagct atctttactt
    11821 atggtttgaa aaaagcagat gatacattta gcaatattca actacctttt tacactttaa
    11881 gtgattacaa tgaattaatt gaagtagctg aaaatgaagg taaaatttct agtgaagata
    11941 tccaaacatt agttgaatgg agagacaact tagcataata tagacactag aaggaggaat
    12001 tcaacatatg aatgacaaaa catctaatga tttatatggg aagataaaac attgtaacga
    12061 atttatcaat cattctaatg attccaatct atctagtagt cacgatgtcg acgaaagttc
    12121 aacgaagcaa aaacatataa aaaataaaac aactatagat cataatgatg atttatttaa
    12181 acatgtaaag gatatattac gtaaacaagg acaaatttaa aaacaaaaaa gctatagtgt
    12241 ttaatatcat gggctgctta accgcatccg aatattacaa acactatagc ttttattata
    12301 taaaaaattt attagcggat aattaacttt attaaaatcc aaccaattaa gaatacgagt
    12361 aataggacta atactggaat cacataatgt aacataacgt ccctccttta acttaatttt
    12421 aattgtaatc aaatttgaca ataagtcaaa acattaatac ctatgataag tatcatttat
    12481 taacatatgt atcatatttt taatcttgcg taatttttat cgttaactat gtgatttaat
    12541 caacaggcca ataagacatt tgtcattcgt gcatataacg gtacgacgcg cttttgtcat
    12601 tttaattatg ttaagataat agtagttata gaagttcaat ctataggagg catagcatgg
    12661 atattccaaa aatcacgaca tttttaatgt ttaataacca agctgaagaa gctgttaaac
    12721 tatacacaag cttatttgaa gatagtgaga ttataacaat ggctaagtat ggtgaaaatg
    12781 gacctggtga tcctgggact gtacaacact caatatttac attaaatgga caagtattca
    12841 tggcaattga tgctaatagt ggcacagaat taccaatgaa tccagcgatt tcattatttg
    12901 ttacagtaaa agatactatt gaaatggaac gactatttaa tggattaaaa gatgaaggtg
    12961 ccattttaat gccaaaaacg aatatgccac catacagaga gtttgcttgg gttcaagata
    13021 agtttggagt aagttttcaa ttagcattac ctgagtaaaa ggattcgcac agcgttgaat
    13081 gataaagaaa cactttttct tatgcatgcg ttttacctat gtatttctat tttaagtaca
    13141 cattagcatt ttagtttcac tcatttttaa aatcacaaag ataatttgta acttaaatga
    13201 tgatacgtta tttaaaaaca cgatacttcg tttcaatgaa cgcattaaat aataaataaa
    13261 cacctcgcaa aagaaagtag tcctttctta tggtgaggtg tttatttgtc gacaacttga
    13321 ttatgattgt ttcatttttt gaataagttc ataatcaggt gtagcataca aagttttttg
    13381 attgtcatat gttacaaacc caggctttgc acctgatggt ttgtgcacat ttttaattaa
    13441 cgtgtaatca acaggtattt gtccagaatt accagctttt gaaaaatatc ctgctaacat
    13501 agccgcttcc ttgattgtcg tatcacttgg tgcgtcatta aatataacga catgtgaacc
    13561 aggaatatct tttgtgtgta accatgtgtg agttttttta gcttttttat ttgttaaata
    13621 atcattttgc ttgttattct tgccaacata tatatcgtcg ccatcagttg atacataatg
    13681 ttgtaattga atctgcgctt tctttttctt agtttgattt ttacgctgtt tcataaagcc
    13741 ttgttctgct aattcatctc taatttcatc aatgtcatgg acagaaatat gatgtaattg
    13801 ttgttcgatt gttgaaaaat aatctatatt gtctttcgtc aattgaattt gatgttgtaa
    13861 ttcacgttct ctcgttttca tacgattata ttgtttataa taatattgag catttgctga
    13921 tggggatttt gtaggattta aaggaatgac aacttcttca ttcgtataat aattcaacgc
    13981 cgtcacttct ttatcacctt gcttaattcg atatatatta gcagtgatca attcaccata
    14041 taactgttca gtatctttat ttttagactg ctcatattct tcaatcaact tcgctaattt
    14101 attttgatat ttgtgcaact gctgttgaac aaatcgaact aaatcattcg cacgttgttt
    14161 aacgcgttca cgttcgccac gcgcatcata aaaacgatca agtaaatcat ttaatgaatc
    14221 gtacgtaact gtatcatcat taaattgatt taactttata aaatagaaat cctctttacc
    14281 tgtttcatga tttttatgaa aaataggagt aggtggtaac ttggtttctg ccataacttc
    14341 gtcgaatgct tctggtaatg ttgatgaagt cataaattga cgacgattaa cgatttcatt
    14401 cgtaattaaa gggctaaatc cttcaaactg attcaataat tgtttagcaa tattacctgc
    14461 gttaaaatcg atatatttca acacctctgc acctgtaata tcatacggat tcattttgtg
    14521 ctgagtaggt ggtgcttcat aattaaatcc tggcattact gtacgatagt gattcgtatt
    14581 tggtgttaag tgtttaaatc cttcaattat tttgcgattt tcatctacta aaattaagtt
    14641 actatgttta cccataatct ctaggataac agtgcggtaa atagtatcgc caatttcatc
    14701 tttactcttt atatcgattt caatgcgacg atcattacca atttgcttaa tcgattcgat
    14761 aataccacct tctaagtgtt ttctaaaaac acgcgcaaac atgggtggat taaatggatt
    14821 atcatatttt ttagtagtca attgtaatct tgaaaagttt ggatggattg acaataacaa
    14881 ttgatggttt tgtctatttt gacgtacaac cattagtatc gtgtcattat caggttgatt
    14941 gattttgtga acgcgtcctg ttgttaaaaa ttgtagagac tcaaccattt tctttgtaaa
    15001 taagccatca taagccataa tttatcttcc accttcttca tatcattcgt ttcattttaa
    15061 catgattgta acttttcggt atagttattg aaccatacat tatgccacac attttacatt
    15121 atctaaaagt ttgcaattca atttatttaa ttaaaattaa tcgtgcaata taacgatatt
    15181 gttagactta atagaaatta tggcatgcaa tttcaaatat gctatacaat ataaagaaca
    15241 atgtgatatc atatttaaat aatagaagat tagcttagag aggtcgtaag gcatggataa
    15301 tgaaaaagga ttgttaatcg ttttatcagg accatctgga gtaggtaaag gtactgttag
    15361 aaaacgaata tttgaagatc caagtacatc atataagtat tctatttcaa tgacaacacg
    15421 tcaaatgcgt gaaggtgaag ttgatggcgt agattacttt tttaaaacta gggatgcgtt
    15481 tgaagcttta atcaaagatg accaatttat agaatatgct gaatatgtag gcaactatta
    15541 tggtacacca gttcaatatg ttaaagatac aatggacgaa ggtcatgatg tatttttaga
    15601 aattgaagta gaaggtgcaa agcaagttag aaagaaattt ccagatgcat tatttatttt
    15661 cttagcacct ccaagtttag atcacttgag agagcgatta gtaggtagag gaacagaatc
    15721 cgatgagaaa atacaaagtc gtattaacga agcacgtaaa gaagtcgaaa tgatgaattt
    15781 atacgattac gttgtagtta atgatgaagt agaacttgcg aagaatagaa ttcaatgtat
    15841 tgtagaagct gagcacttaa aaagagagcg cgtagaagct aagtatagaa aaatgatttt
    15901 ggaggctaaa aaataatgtt aaatccacca ttaaaccaat taacgtcaca aattaaatca
    15961 aagtatttaa ttgcaacaac tgcagcgaaa agagcgcgtg aaattgatga acaacctgaa
    16021 actgaattat taagtgaata tcattcattt aaaccagttg gtagagcgtt agaagaaatt
    16081 gctgacggta aaattcgccc tgttatttca agcgattatt atggtaaaga atagtttcga
    16141 ccattaaaaa tatgtgaagc tagacgtaca tcaaatacgt caaggcatat ccaaatcaaa
    16201 cgcacctatg taggtgtgtt tttttagttt atccaatgat tgatgttata ataatactaa
    16261 atttgtatct ataaaaaagt aatgagcatt tgtgcgcata tgatgatgta aagcgtaaat
    16321 gtcatagtga tatttaaggg agattaaata tgaagaaaat attattagcc gttacaggtg
    16381 gcattgcggc atataaagca attgatttga caagtaagtt aacacaatct gggtatgaag
    16441 ttcgcgttat gttaacgaat cacgcacaaa aatttgtgac accattagca tttcaagcaa
    16501 taagtcgaaa tgctgtttat acagatactt ttatagaaga aaatccttca gaaatacagc
    16561 atattgcatt aggtgattgg gcagatgcaa tcattgttgc acctgcaacg gcaaatacaa
    16621 ttgcaaaatt gagtgtaggt attgctgatg atttggtgac atcaacgttg ctagcaacag
    16681 agacaccgaa atttattgcg cctgctatga atgtgcatat gtatgaaaat aaacgtacgc
    16741 agcaaaatat taatatttta aaagaagatg ggtatcattt tatcgaacca ggaagcggat
    16801 ttctagcatg tggttatgtt gctaaaggac gtatggaaga accgcttcaa atcgtttctg
    16861 ttattgatgc tcattttcaa aatagtaatc gtttagctaa tagttcattt caagataaac
    16921 gcgcattggt tacagcagga ccaactattg aagttatcga tccagtcaga tttgtatcca
    16981 atcgttcttc tggaaaaatg ggctatgcaa tagctgaagc attgcgaaat cgaggagcta
    17041 tcgtgacgtt agttgctggt cctacaacac tagaggatcc aaaagatatt gaagttattc
    17101 atgttcaaag tgctgaagaa atgtttgaac aagtgacaag ccgatttgac gaacaagata
    17161 ttgttgtaaa agcagcagcc gtatctgact atacaccagt tgatgtatta gaacataaga
    17221 tgaaaaagca ggatggtgat ttatcagtat cttttaaacg tactaaagac attcttaaat
    17281 atttaggtga acataaaaca tcacagtatt taataggctt tgcagcagag actgaagata
    17341 ttgaaaatta tgcacaacaa aaattacgca agaaaaatgc agatgtgatt atttcaaata
    17401 atgttgggga tatgtctatc ggatttagtt ctgatgataa tgaattgaca atgcatttta
    17461 aaaataatga aaaggtaaat atcaagaaag gaaaaaaagt agtattagct gcacaaattt
    17521 tagatgaact agaaactagg tggcaataat gatagcgaaa gtcatagtcg atgtcgcgtc
    17581 gaagagcgtt gactttaaat ttgattatat aattcctgaa caactcgaat ctgtcatcca
    17641 acctggtgtg cgtgtgattg taccttttgg accaagaacg attcaaggtt atgtaatgga
    17701 agtaacagca gaacctgatg cacaacttga cgtttcgaag ttaaaaaaaa tcatagaagt
    17761 gaaagatata caacctgaat taacatcaga attaatagct ttaagtgagt ggatgggttc
    17821 aactcatgtc attaaacgta tttctatgct agaagtgatg cttccgagtg ctattaaagc
    17881 gaagtataaa aaagcattta agatgaaaga tgacatagag ctaccttcag ctttattaca
    17941 aaaatttgat aagcatggtt actattatta taaagatgcg caaaaaaata atgatattca
    18001 attgcttatg aagttgttaa aagatgatat cgttgaagaa aaaacgattc tcacacaaaa
    18061 tataactaaa aaaaccaagc gtgctgttcg tgtcattgaa gggtatcatc ctgatgaagt
    18121 attagctaag ttggagaaag ttattaaaca atacgatttg tatgcttact tgtctgaaga
    18181 acaacataaa acaatatttt taactgatat tgaggatatg ggcttttcaa aatccagttt
    18241 agatggactt atcaaaaaag gttatgttga aaaatatgac gcggttgttg atagagaccc
    18301 atttaaagat cgtgttttcg aacaagaatc aaaacagcaa ttaacagaag atcaatataa
    18361 agcatatgaa gcgattaaag ctaaaattgt aagccaagag caagaaacat ttttacttca
    18421 tggtgtgacg ggatcaggta aaacagaagt atatttacaa acgatagaag atgttttaag
    18481 ccaaggaaaa caggcgatga tgttagttcc tgaaatcgct ctaacaccgc aaatggtttt
    18541 acgcttcaaa cgtcgatttg gtgatgacgt tgctgtatta cattctggct tatctaatgg
    18601 ggaacgttat gatgagtggc aaaaaattag ggatggtcgt gcgagagtaa gtgttggtgc
    18661 aaggtcaagt gtgttcgcac ctttcaaaaa tttagggtta atcatcattg atgaagaaca
    18721 tgaatctaca tataaacaag aagattatcc gagatatcac gctagagaaa ttgcccaatg
    18781 gcgaagtgaa tatcatcact gtccagtcat tttaggaagt gcaacaccat gtcttgaaag
    18841 ttatgcacga gctgaaaaag gcgtttatca tttgctatca ttaccaaaca gagtgaacca
    18901 acaagcttta cctgaaattg atatagtaga catgcgtgaa gaattgagtg aaggtaatcg
    18961 gtcaatgttt tcaaaagatt tacgtgaagc catacaatta agattagatc gacaggaaca
    19021 agttgtttta tttttaaatc gacgtggtta tgcatcgttt atgttatgtc gggattgtgg
    19081 atatgtaccg caatgtccaa actgtgatat ttcattaacg tatcataaaa cgacagactt
    19141 attaaaatgt cactattgtg gttaccaaga gacgccaccg aatcaatgtc caaattgtga
    19201 gagtgaacac attcgacaag taggtactgg tactcagaaa gttgaagaac tattgcaaca
    19261 agaatttgaa gatgcgcgca taattaggat ggatgtagat acaacctcaa agaaaggtgc
    19321 acatgaaaag ttattgactg aattcgaaaa aggtaacggt gacattttac taggtactca
    19381 gatgattgcg aaaggattag attatccaaa tattacttta gttggtgtgc tgaatgcaga
    19441 tacaatgtta aatttacctg attttcgggc gagcgaacgt acttatcaac tattaacgca
    19501 agtggctggt agagctggtc gtcatgaaaa ggcaggtcaa gtcatcattc aaacgtataa
    19561 tccagatcat tattcaatat tggatgttca aaaaaatgat tatttaacat tttatcgtca
    19621 ggaaatggaa tatcgtaaat taggaaagta tccaccgtat tattatttga ttaatttcac
    19681 aatctcacat aaagaaatga agaaggttat ggaagcatcg cagcatgttc ataaaatttt
    19741 attacagcat ttaacagaaa aagcgcttgt gctaggtcca tctccggcag cacttgcgag
    19801 aatcaacaat gaatttagat tccaaatttt agtgaaatat aaaagtgaac ctggattatt
    19861 acaagccatt cagtttttag atgactatta ccatgaaaaa tttataaaag aaaaattagc
    19921 attgaagatt gatattgatc cgcagatgat gatgtaacat tactaattat tagaaacaag
    19981 ttcagtatgt acgagtattt gaaccagtgt ttgaatattt actttaagta cagaataagg
    20041 gcagaatata caactgttaa ctatttaaat tagcagttta tattctgtct ttttatatgg
    20101 ctttataact tacgtgattt tggtttgata aggaatttat tagtattttc atttacgaat
    20161 tctgatttta atgcaagcgc catacttact gatgaataaa agtactaatg attaagcaaa
    20221 ctatttttaa atggcaaatt gaaatagtgc aaattttaaa cttataaatt aatggctata
    20281 aactatttta tatctatcta tgttttaact acttaaatta ttag
//
LOCUS       DAKPJH010000044        20227 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.044, whole genome shotgun sequence.
ACCESSION   DAKPJH010000044 DAKPJH010000000
VERSION     DAKPJH010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20227
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.044"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(18..923)
                     /locus_tag="OY092_001322"
     CDS             complement(18..923)
                     /locus_tag="OY092_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HCX1076273.1"
                     /translation="MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVI
                     AMSLYFHHLTKTSDSLSDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKT
                     SSPNVIKALTSSEDTLFYKHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVL
                     TNEKTYSRKANELRLAIRLEHLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLF
                     GIPPKDLSIAQSAYLIGLLQSPYGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIED
                     QITEKEYNDALKYDIKSHLLNRKKR"
     gene            1304..2566
                     /locus_tag="OY092_001323"
     CDS             1304..2566
                     /locus_tag="OY092_001323"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HCX1076274.1"
                     /translation="MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTAD
                     SLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEG
                     ISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
                     HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYG
                     LTIPLVTKSDGKKFGKSESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGK
                     EEVDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAK
                     ELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNY
                     ALAPEDKIDGEFTIIRRGKKKYFMVNYQ"
     gene            complement(2660..3934)
                     /locus_tag="OY092_001324"
     CDS             complement(2660..3934)
                     /locus_tag="OY092_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HCX1076275.1"
                     /translation="MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALL
                     VLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSKKFGTVHEMIKSVSPTIVGVINM
                     QKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
                     QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSV
                     TSGIISASERTIDAETTGGNTKVSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAA
                     TQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIPEEEREQLHTDREDG
                     IYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKE
                     VKVKLKQQKEQPKRQSRSERQSPGQGDRDFFR"
     gene            4106..4723
                     /locus_tag="OY092_001325"
     CDS             4106..4723
                     /locus_tag="OY092_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HCX1076276.1"
                     /translation="MYSVISKILNFILVKMSKSLYVIGKDNIPKDSKYVVTCTHESYN
                     EVIMLGMALYPNQIHYMAKKELFKNKWIGKFLTSLNAFPVDRENPGPSTLKRPINLLK
                     DNKTVGIFPTGSRTSQEGAPLKRGASTIAMLSKSPILPVAYVGPTKIHGLLTGQAYIN
                     IGKPIDINDLPKDLKRNERIDYITKEIETRTAKLQQELHEIVKSL"
     gene            4851..6317
                     /locus_tag="OY092_001326"
     CDS             4851..6317
                     /locus_tag="OY092_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HCX1076277.1"
                     /translation="MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMF
                     FTTVGTTILEQLGILFAIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGM
                     KASEINSAFEKMNNGNVFVGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAF
                     YCTFLVVILLFLWPLLYSWIVKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVF
                     WFDTIGINDIGKFQSGKDAIKGITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQV
                     YGWFLASSVAAFFVGVTEPIEFAFMFVAPILYVVHALLTGLSLFIAATFHWTAGFSFS
                     AGLIDYVLSLINPVSNHPLMLLVQGVVFFILYYVIFRVVIQVFNLNTIGRGENELVDP
                     TVVKDNIAPGENDIKQSKYHQHAIQILEGLGGQENIVNLTNCATRLRLELKDTSIIDQ
                     QKIKNAGAVGVTVNGKHSTQVIVGTHVQQVADEIEKHL"
     gene            6424..7554
                     /locus_tag="OY092_001327"
     CDS             6424..7554
                     /locus_tag="OY092_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1076278.1"
                     /translation="MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDW
                     ETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIE
                     AFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH
                     VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVD
                     EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY
                     PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI
                     GATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNL"
     gene            complement(7515..7610)
                     /locus_tag="OY092_001328"
     CDS             complement(7515..7610)
                     /locus_tag="OY092_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076279.1"
                     /translation="MKPLVQSFTSSCAVKQQSNYKLSSTPLSSPK"
     gene            complement(7704..9308)
                     /locus_tag="OY092_001329"
     CDS             complement(7704..9308)
                     /locus_tag="OY092_001329"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCX1076280.1"
                     /translation="MKQFNVLVADPISKDGIKALLDHEKFNVDIQTGLSEEALIKIIP
                     SYHALIVRSQTTVTENIINAADSLKVIARAGVGVDNINIDAATLKGILVINAPDGNTI
                     SATEHSLAMLLSMARNIPQAHQSLTNKERNRNAFKGTELYHKTLGVIGAGRIGLGVAK
                     RAQSFGMKILAFDPYLTDEKAKSLSITKATVDEIAQHSDFVTLHTPLTPKTKGLINAD
                     FFAKAKPSLQIINVARGGIIDEKALIKALDEGQISRAAIDVFEHEPATDSPLVAHDKI
                     IVTPHLGASTVEAQEKVAISVSNEIIEILIDGTVTHAVNAPKMDLSNIDDTVKSFINL
                     SQTVGELAIQLMYNAPSSIKITYGGDLASIDSSLLTRTIITHILKDDLGPEVNIINAL
                     MLLNQQQVTLNIENNKAETGFSNYLEVELSNDSDSVKVGASVFTGFGQRIVRINNFSV
                     DLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTEAGGDALMILSVDQPV
                     SNNIIDELKQVGEYNQIFTTELTVQS"
     gene            complement(9295..10455)
                     /locus_tag="OY092_001330"
     CDS             complement(9295..10455)
                     /locus_tag="OY092_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HCX1076281.1"
                     /translation="MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAF
                     QGLKPIFGSQNDVLILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYY
                     KNVHIYDVTWGEAVDVKDFINYLSTLDVEVKAVFSQYCETSTTVLHPIHELGNAINQF
                     NSNIYFVVDGVSCIGAVDVDINKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKERFKE
                     VTTPKFYLDLNKYISSQADNSTPFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRN
                     ALRSALKALDLTLLANDKDASPTVTAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLK
                     GQILRIGHMGKISPFDILSVVSALEIILTEHRKVNYIGKGISKYMEVIHEAI"
     gene            complement(10570..11016)
                     /locus_tag="OY092_001331"
     CDS             complement(10570..11016)
                     /locus_tag="OY092_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HCX1076282.1"
                     /translation="MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGT
                     NPDEMLVSAASSCYIISLAATLERAKFTDISIEQQSIGTACLNNGKFSMSKIVHHPHI
                     EIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK"
     gene            11096..11839
                     /locus_tag="OY092_001332"
     CDS             11096..11839
                     /locus_tag="OY092_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCX1076283.1"
                     /translation="MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEID
                     VHLTKDQHFVVIHDETIDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDE
                     VLSLCLKYDKKLLIELKSPNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNT
                     LGSIYELGVLCSKRKYWYKKPNFSRISQIASYVNPNYALVTRKFVDEAHHHQLQVMPY
                     TVNKLKTGEKLRQMGVDGLITDNPKLFIK"
     gene            complement(12056..12658)
                     /gene="rpsD"
                     /locus_tag="OY092_001333"
     CDS             complement(12056..12658)
                     /gene="rpsD"
                     /locus_tag="OY092_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HCX1076284.1"
                     /translation="MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKL
                     SEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLG
                     LARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEINNF
                     VPEYLNFDADSLTGTFVRLPERSELPAEINEQLIVEYYSR"
     gene            complement(12902..13366)
                     /locus_tag="OY092_001334"
     CDS             complement(12902..13366)
                     /locus_tag="OY092_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HCX1076285.1"
                     /translation="MTTINPTNYALLKKQAASLIEDEHHMIAILSNMSALLNDNLDQI
                     NWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQIVADVHQFEGHIAC
                     DANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA"
     gene            13503..15197
                     /gene="ezrA"
                     /locus_tag="OY092_001335"
     CDS             13503..15197
                     /gene="ezrA"
                     /locus_tag="OY092_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HCX1076286.1"
                     /translation="MVLYIILAIIVIILIAVGVLFYLRSNKRQIIEKAIERKNEIETL
                     PFDQNLAQLSKLNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNAEALLDKFSFNA
                     AQSEIDDANELMDSYEQSYQQQLEDVNEIIALYKDNDELYDKCKVDYREMKRDVLANR
                     HQFGEAASLLETEIEKFEPRLEQYEVLKADGNYVQAHNHIAALNEQMKQLRSYMEEIP
                     ELIRETQKELPGQFQDLKYGCRDLKVEGYDLDHVKVDSTLQSLKTELSFVEPLISRLE
                     LEEANDKLANINDKLDDMYDLIEHEVKAKNDVEETKDIITDNLFKAKDMNYTLQTEIE
                     YVRENYYINESDAQSVRQFENEIQSLISVYDDILKEMSKSAVRYSEVQDNLQYLEDHV
                     TVINDKQEKLQNHLIQLREDEAEAEDNLLRVQSKKEEVYRRLLASNLTSVPERFIIMK
                     NEIDHEVRDVNEQFSERPIHVKQLKDKVSKIVIQMNTFEDEANDVLVNAVYAEKLIQY
                     GNRYRKDYSNVDKSLNEAERLFKNNRYKRAIEIAEQALESVEPGVTKHIEEEVIKQ"
     gene            complement(15271..15412)
                     /locus_tag="OY092_001336"
                     /pseudo
     CDS             complement(15271..15412)
                     /locus_tag="OY092_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500331.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            15562..16710
                     /locus_tag="OY092_001337"
     CDS             15562..16710
                     /locus_tag="OY092_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCX1076287.1"
                     /translation="MFILIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQA
                     NQLLQQAKAQINAMINSKTNYNVVFTSGATESNNLALKGIAYRKFDTAKEIITSVLEH
                     PSVLEVVRYLEAHEGFKVNYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQ
                     PIPQMAEVIKNYPKAHFHVDAVQAFGKISMDFNNVDSISLSGHKFNGLKGQGVLLVNH
                     IQNVEPTVHGGGQEYGVRSGTVNLPNDIAMVKAMKIANENFEALNAFVTELNNDVRQF
                     LNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTSACSSKRNKLNE
                     VLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK"
     gene            16710..17933
                     /gene="thiI"
                     /locus_tag="OY092_001338"
     CDS             16710..17933
                     /gene="thiI"
                     /locus_tag="OY092_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HCX1076288.1"
                     /translation="MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVK
                     GKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKVEKTIEAMSAAAIKFAQQFEE
                     NSTFKIDVKRADKNFPMDTYELQRELGGTVLKQIENVSVNVKRPDHEIRVEVRLDAIY
                     MYEEVVPGSGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQ
                     AKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLV
                     HQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTF
                     ETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVFDFEEMINRAVENIETLEITSDYK
                     TIKEQQTNQLINDFL"
     gene            17977..18747
                     /locus_tag="OY092_001339"
     CDS             17977..18747
                     /locus_tag="OY092_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HCX1076289.1"
                     /translation="MDLNLTMIIIIILFGFIAAFIDSVVGGGGLISTPALLAIGLPPS
                     VALGTNKLASSFGSLTSTIKFIRSGKVDLFVVAKLFGFVFLASACGAYIATMVPSQIL
                     KPLIIIALSSVFIFTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGS
                     FMLFVLLIFGFDFLSAAGNAKVLNFASNIGALVLFMVLGQVDYVIGLIMATSMIAGSY
                     TGAHFAIKQGVAYVKVLFIIITAILILKNAFDYIQQFV"
     gene            18845..19339
                     /gene="tpx"
                     /locus_tag="OY092_001340"
     CDS             18845..19339
                     /gene="tpx"
                     /locus_tag="OY092_001340"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HCX1076290.1"
                     /translation="MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAG
                     KKKLISVVPSIDTGVCDQQTRKFNSEASKEEGIVLTISADLPFAQKRWCASAGLDNVI
                     TLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAA
                     CKII"
     gene            19462..>20227
                     /locus_tag="OY092_001341"
     CDS             19462..>20227
                     /locus_tag="OY092_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1076291.1"
                     /translation="MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTN
                     ERGLLEQSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQEE
                     LHIVDIASGAGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQD
                     AIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEEGHSYSHYLLIEQAINALKDAG
                     YAFLVVPSNIFTGEHVKQLEKYIATETEMQAFLNLPP"
BASE COUNT         6848 a         2912 c         3652 g         6815 t
ORIGIN      
        1 taaaaagtga gcatcaatta acgctttttt cgatttaaca aatgtgattt aatatcatat
       61 tttaatgcgt cgttgtattc tttttcagtg atttgatctt cgattaacat acgctttaat
      121 acataatgtt gtctttgaat actatatttc aaatctttat ccgattttaa cgttccatct
      181 ttttcgtagg gtgtatagcc ataagggctt tgcaacaaac cgataaggta tgcagattgt
      241 gcaattgata aatcttttgg tggaatacca aacaaactat atgaagcgga tgcaattccg
      301 gaaatattag cgccattata atctctaccg aagggaacta tatttaaata tgtatatata
      361 atttcatctt ttgagagtag gtgttctaat ctaattgcta ggcgaagttc atttgctttt
      421 ctactatatg ttttttcgtt ggtaagaact tgatttttaa caagttgttg tgtaattgtg
      481 ctaccacctg aactttgatc agtattaaaa atatcttgta tcattgctct taaaatcgcc
      541 tttggtaaga tgccatcatg tttataaaat aaagtgtctt cagatgacgt taatgcttta
      601 atgacatttg gacttgatgt tttagggcct ataatgagtg agttttgaga atggttatac
      661 tcatataata aatttttgtt attatgatct aataattcat cgccaggtat ttgtcgaact
      721 ttttttatta aagcatcatc tgataatgag tcggacgttt tagttaaatg atgaaaatat
      781 aaagacatcg caatcacagc gatagcaacg atggcaatga aaatcataaa tataaaaaca
      841 atgacatgtt tgatagcttt atatatcttt tcaaaatgat atatacgatg attcaattga
      901 tgattgttgt cttgattcgt catctttaac ctcctaaatt acgtatagta taccatattt
      961 aagcaatttg acttttattt taacgttaat tataattagg gaaaatgcat aaagaatagg
     1021 ataaaaggac aagtaatatt atttgaaatc atcagagagc tagtggtcgc tgtgaactag
     1081 tgtttttaat aatatgaata cacctttata actaacatgt cctacgttta ttaatgaacg
     1141 tatcattaat agagtgaaca ttatcttatg attatgttta agtttggtgg taacgtgcaa
     1201 tcgcgccctt acatatttgt tgtaagggtt tttttacgtt caaaaagctt taaagtattt
     1261 taacaagtat tcaataaata attataaata ggaggaaata ataatgacga atgtattaat
     1321 tgaagattta aaatggagag gtcttattta tcaacaaact gatgaacaag gtattgaaga
     1381 tttattaaat aaagaacaag tgacgttata ctgtggtgcc gatccaacag cagatagctt
     1441 acacattggt cacttattac catttttaac attaagaaga tttcaagaac atggacatcg
     1501 tcctatcgtt ttaattggcg gtggtacagg tatgattggt gatccatcag gtaaatcaga
     1561 agaacgtgtg ctacaaacag aagaacaagt agataaaaat atcgaaggta ttagtaagca
     1621 aatgcacaat atttttgaat ttggaacaga ccatggtgca gtgcttgtta ataatagaga
     1681 ctggttagga caaatctcat taattagctt tttacgtgac tatggtaaac acgtcggcgt
     1741 taattacatg ttaggtaaag attcaatcca aagtcgttta gaacatggta tttcatatac
     1801 agaattcaca tacacgattt tacaagctat tgatttcggt catttgaata gagaattgaa
     1861 ttgtaagatt caagtaggtg gatcagatca atggggtaat atcacaagtg gtattgaatt
     1921 aatgcgtcgt atgtatggtc aaacagacgc atacggttta actattccgc ttgtaactaa
     1981 atcagatggt aagaaatttg gtaagtctga gtcaggtgct gtttggttag atgctgaaaa
     2041 aacaagtcct tatgaatttt atcaattctg gattaatcaa tcagacgaag atgtaattaa
     2101 attcttaaaa tactttactt tcttaggaaa agaagaagtt gatcgcttag aacaatctaa
     2161 aaatgaagca ccgcatttac gtgaagctca aaaaacatta gctgaagaag taactaaatt
     2221 tattcatggt gaagatgcat taaatgatgc aatccgtatt tcacaagcat tatttagtgg
     2281 tgatttaaaa tcattatcag cgaaagaatt aaaagatgga tttaaagatg tgcctcaagt
     2341 gacattatca aatgacacaa caaatatcgt tgaagtcctt attgaaacag gcatttctcc
     2401 ttctaaacga caagcacgtg aagatgttaa caatggtgcg atttatatta atggtgagag
     2461 acaacaagat gttaattatg ctttagcacc agaagataaa attgatggcg aatttacgat
     2521 tattcgtcgc ggtaagaaaa aatacttcat ggttaactat caataaatat aattgcatag
     2581 ctaaataaat tagagcctac tcattacatt cttaggaatg aatatgagta ggctcttaat
     2641 gtactttact gtctgtaaat tatctaaaga aatctctatc gccttggcca ggtgattgac
     2701 gttctgatcg gctttgacgt tttggttgtt ctttttgttg ttttaatttc actttaactt
     2761 cttttgtttt accatcacgg ataacggtaa cagtgactga ttcaccaggt tttttatttt
     2821 catataaata gcttcttaaa tcaacatcat ctttaatttt cttgccatca atttctgtaa
     2881 taatatcacc ttttttaaga tcaatatcac tatcagcttt ggcgacataa ataccgtctt
     2941 ctctatcagt atgaagttgc tcgcgctctt cttcaggaat atctttcaaa ttaattaaac
     3001 caataccaat cgaagggcgg tcaattttac catgttttac aagttgttca attgttactt
     3061 taacttcatt acttggaata gcaaacccga taccttcaac ttgtgtcgca gcaattttca
     3121 ttgagttaat accaactaaa ttaccattaa tatctactaa tgcgccacct gagttacctg
     3181 ggttaatagc agcatctgtt tgaagaacgc tgacttttgt attgccacca gttgtctcag
     3241 cgtcaatcgt acgttcgctt gctgaaatga taccagatgt tacagagtta gcaaattgta
     3301 atcctaatgg gttacccatt gcgaatacgc tatcgccagt ttgtactttt gaagagttgg
     3361 caaattgaat cgctttaata ccttttgtat tttcaatttt aagtacagca atatcagtta
     3421 ctgcatcttt accaactaat ttcgctttaa cttgtttttt attatgtaat tggactctaa
     3481 tttcatttgc gccatcaata acatgattgt ttgtaacgat ataagctgaa ttgttgttta
     3541 tttgatagat aacacctgaa cctactccag cttcagatgg tttagatgat ttgcctttta
     3601 ataagtcgtc tacacttgat gctttttgca tgttaataac tccaacaatt gtaggggaga
     3661 cagattttat catttcatga acggtaccga atttcttgct ttgaccgtct aattgattgc
     3721 cacctttatt atttgttgtc tggacagttg aaccatcttt atttaaaatt gtactattta
     3781 atactttgcc tataccaagt actagaagtg caccaataat tccagcaatc aatgcaacga
     3841 tgactgtttt aaaccatgga aatttaggtc ttctgtatct aggtgtttgg ctatggtttg
     3901 ttgtagaatg atctgtatga ttaaaatctg acatacttaa cctccattat atgatttata
     3961 tatgctttaa ttatgtcttt tttttataat tattgctagt aatacactat acaactttag
     4021 atgtattttc agactatctt gttctagtaa aaatatagtg ataaaatcta gttgttataa
     4081 acaaataagt taagtaggtg gcacaatgta ttcagtgatt agtaagattt tgaatttcat
     4141 tttagttaaa atgtcaaaat cattatacgt aatcggtaaa gataatattc ctaaggatag
     4201 taaatatgtc gtaacttgta cgcatgaaag ttataacgaa gtcattatgc taggtatggc
     4261 attatatcct aatcaaattc attatatggc taaaaaagaa ttattcaaaa ataaatggat
     4321 tggtaaattt ttaacgtctt taaatgcatt tcctgtagat cgtgaaaatc caggacctag
     4381 tactttaaaa cgcccaatca atttgttgaa agataataag acagttggta tcttcccaac
     4441 aggttctcgc acatcgcaag aaggtgcacc tttgaaacgt ggtgcttcaa caattgcaat
     4501 gttaagtaag tcaccaatat tacctgttgc ttatgttggt cctactaaga ttcacggtct
     4561 tttaacagga caagcataca taaatattgg taaaccaatc gatattaacg atttacctaa
     4621 agatttaaaa cgaaacgagc gtatcgatta tattacaaaa gagattgaaa cacgaacagc
     4681 aaagttacaa caagaattgc atgaaattgt aaaaagttta taaaataact tgaggtagaa
     4741 atatagctgg ttagtaagcc taggtgacta taacggagta tcgaagtagt tattctagtt
     4801 acattagtaa tctttatatt tctaccttat tttaagaagg atgacattca atgtataaat
     4861 ttttccaaaa tttagggcgt tcgttaatgt taccagttgc cattttaccg gctgcagcaa
     4921 ttattgccgg aattggtaat acgttaaatg cacttcatgc gacgccgaaa atcgcaatgt
     4981 tctttactac ggtaggtact acgattttag agcaattagg tattttattt gcaattggtg
     5041 tagctatagg aatggcaaag aaaaatgatg gtgcagtcgc gcttgcagct acgttaggat
     5101 attttttagt tacagttgta ttatcaccaa tgaaattagc gcctttatta ggaatgaaag
     5161 cttcggaaat aaattcagct tttgaaaaga tgaataatgg caatgtcttt gttggtattg
     5221 taataggttt aatagcagct tatgcataca ataagtttag tgaaacagaa ttaccattag
     5281 cattatcatt ttttagtggt aaacgtctag ttccaattat gactgcattt tactgtacat
     5341 ttttagttgt catattgtta ttcttatggc cactacttta ttcatggatt gtaaaatttg
     5401 gtgaatctat agtcggttta ggatcgtttg gagctttcat atatggtgtt gccaatagat
     5461 tattaattcc tacaggatta catcatgcac tgaatagtgt gttctggttt gatacgattg
     5521 gtattaatga tattggtaaa ttccaaagtg gcaaagatgc tataaaaggt attacaggac
     5581 gctatcaagc gggattcttc ccaatcatga tgttcggtat tccagcggct gcgttagcaa
     5641 tgtatcatac agctaaaacg actcagaaaa aacaagttta cggttggttc ctagcgagtt
     5701 cagttgcagc atttttcgtt ggtgttacag agccgattga gtttgcattt atgtttgttg
     5761 cgccaatctt atatgttgtt catgcgttat taacaggatt atctttattt atcgcagcta
     5821 cattccattg gacagctgga ttttcattta gtgcaggttt gatagattat gtgttatcac
     5881 taattaatcc agtatcaaat catccattga tgttgcttgt tcaaggtgtt gtatttttca
     5941 tcttatacta tgtgattttc cgtgtagtaa tccaagtatt taacttgaat acgattggta
     6001 gaggtgaaaa tgaattagtt gatccaacag ttgtaaaaga taatattgct cctggtgaaa
     6061 atgatattaa acaaagtaaa tatcatcaac atgctataca aatattagaa ggtttaggtg
     6121 gtcaagagaa tattgttaat ttaactaatt gtgcaacaag gttgcgtcta gagttaaaag
     6181 acacatctat tattgatcaa cagaagatta aaaacgccgg tgcagttggt gttactgtta
     6241 atggtaaaca ttcaactcaa gttattgtcg gtacacacgt acagcaggtt gctgatgaaa
     6301 ttgaaaaaca tttataaaat ttaaacagct aaagcgcaaa tccaacttca atagggtttg
     6361 cgcttttttt agtcaaatag tagaatgatt tatatctgaa ttttcagaaa tggagtgggg
     6421 attgtgaaga aaattttatt tgatgttgat ggcgtttttt taagtgaaga acgttgtttc
     6481 gatgtctctg cattaacggt atatgaatta ttaatggata agtgttattt aggtcttcat
     6541 tcacatatag attgggaaac tttgactgat aacgatatac aagacattag gaatcgaatt
     6601 tttcaaaaag ataagatttt aaacaaatta aaatcgctag ggctaaattc aaattgggat
     6661 atgttattta tcgtttttag tattcattta attgatattt tgaaaaagtt atcacatgat
     6721 gaaattgagg cattcatgta tcaagatgag cctgtcgaat tgaagttgca aaatataagc
     6781 acaaacttag cagactgttt taatttaaat gaacaactac ctttacaatt tttggataat
     6841 gtaaaagttg gtaaaaataa tatttatgct gctttggaag agtttgcaac aacagagtta
     6901 catgtttcgg atgctacttt atttagtttg aagggtgcat tatggacgtt agcgcaagaa
     6961 gtttatcaag aatggtattt aggatcgaag ttgtatgaag atgttgaaaa gaaaatagca
     7021 cgaactactt ttaagacagg ttatatttat caagaaatta ttttgagacc agtagatgaa
     7081 gttaaggtac ttctgaatga tttaaaaggt gctggtttcg aattaggtat tgcaacaggt
     7141 cgtccttata ctgagactgt tgtgccattt gaaaatttag gattgttacc atattttgaa
     7201 gctgatttta ttgcaactgc aagtgatgtt ttagaagcag agaatatgta tccgcaagca
     7261 cgaccattag gaaagccgaa tccttttagt tatatcgcag ctttatatgg taataatcgc
     7321 gataaatatg aatcttatat caataagcaa gataacattg taaataaaga tgacgtattt
     7381 atagtaggcg attcgttagc tgacttatta agtgctcaaa aaataggtgc aacgtttatt
     7441 ggaacattaa caggtttaaa aggtaaggat gctgcaggtg agttagaagc gcatcatgcc
     7501 gactatgtta ttaatcattt aggtgaactt agaggtgtac tagataattt gtaatttgat
     7561 tgttgtttga cagcacaact tgaagtgaat gattgaacca aaggtttcat attgagttac
     7621 aatgaaatta ataatgaaaa aatgccaaga agtaatggaa gtaatccaat gtcttcttgg
     7681 cattttgaat ttacataaat tgtttatgac tgtaccgtca attcagttgt gaaaatttga
     7741 ttgtattcac caacttgttt aagttcatca attatattgt ttgaaacagg ttgatcaacg
     7801 gataaaatca ttagcgcatc tccgcccgct tcagttctac ctaaagtcat agatgcaatg
     7861 ttgatattgt atttacctaa caatgcgcca gtttttccta ccatacctgg agtatcatta
     7921 tgatatgaca caatttgata ttgatttggc tttaagtcta cagaaaaatt attaattcta
     7981 acaattcttt gaccgaaacc tgtaaagaca gaagcgccaa ctttaacgga atcgctatcg
     8041 tttgatagtt ctacctctaa gtagttacta aaacctgtct ctgctttatt attttcaata
     8101 tttaatgtca cttgttgttg gtttaacaac attagagcat tgataatatt gacttcagga
     8161 ccaagatcat cttttaaaat atgagtaata attgtacgtg ttaataaact actatcaata
     8221 gaggctaagt cgccaccgta cgtaatttta atagagcttg gtgcattgta cattaattga
     8281 atagctaatt caccaactgt ttggcttaaa ttgatgaatg attttacagt atcatctata
     8341 ttgcttaagt ccattttagg tgcattcact gcatgcgtta cagtaccatc aattaaaatt
     8401 tcgatgattt catttgaaac agaaattgcc actttttctt gagcttcgac tgttgaagca
     8461 cccaaatgag gtgtaacaat aattttatca tgtgcaacaa gaggcgaatc agttgcaggt
     8521 tcatgttcaa acacatcgat agctgcccga ctaatttgtc cttcgtctaa tgcttttatt
     8581 agcgcctttt catcaataat accaccacgt gccacattga ttatttgcaa actaggtttt
     8641 gctttggcaa aaaagtcagc attaattaag ccttttgttt taggtgttag tggtgtatgt
     8701 aatgtaacga aatcagaatg ttgggcaatc tcatcaactg ttgccttcgt aatgcttaaa
     8761 gattttgctt tttcatccgt taagtaaggg tcaaaagcta gtattttcat tccgaaactt
     8821 tgcgcacgtt tagcaacacc taaaccaatt ctaccagcac caatgacacc taatgtttta
     8881 tgataaagct cagtaccttt aaatgcattt cgattccttt ctttatttgt aagtgattgg
     8941 tgtgcttgcg gaatatttcg agccattgat aataacattg ccagtgaatg ttcagtagct
     9001 gaaatcgtat taccatctgg ggcattaata actaaaatac cttttaatgt tgcagcatca
     9061 atattaatat tatctacacc aacaccggcg cgtgcgatta cttttaaaga atcagcagca
     9121 tttatgatat tttcagtgac cgtagtttga ctacgaacga ttaaagcatg gtatgaaggt
     9181 ataattttga ttaatgcttc ttcggacaag ccagtttgaa tatctacatt aaatttttcg
     9241 tgatctaata atgctttgat accatctttt gatatgggat ctgcaacgag tacattaaat
     9301 tgcttcatga ataacctcca tatattttga tataccttta ccgatatagt taactttacg
     9361 gtgttcagtt aaaataattt ctaaagcaga tactaccgat aaaatatcga aaggactaat
     9421 tttccccata tgaccaattc ttaaaatttg acctttaaga tggccttgac caccagcaat
     9481 tgttatttta aagcgatttt taagttcatc tttgattatt ttcacttcat catttgtatt
     9541 aggtttgaat gctgtaaccg ttggagatgc atctttatca ttggctaata aagttaaatc
     9601 taatgctttt aaggcgcttc ttaatgcatt tctaattgca tagtgtcgtg ctattacgtg
     9661 attgaaacct tctgctttta cggtttcaac gtatgcattt acacctctaa ataaagacac
     9721 atttggtgtg aacggtgtag aattgtcagc ttgtgacgaa atgtatttat ttaagtctag
     9781 ataaaatttt ggtgtagtta cttctttgaa acgttctttt gcgcggtggc tataagctac
     9841 aaaagctaat cctggaggta acataattgc tttttgacta ccagaaacaa ggacatcaat
     9901 tttatctttg ttaatgtcaa catcaacagc cccaatgcaa cttacgccgt caactacaaa
     9961 ataaatatta ctattaaatt gattgatggc atttcctaac tcgtgaatag ggtgtagcac
    10021 tgtcgtagat gtttcgcaat attgactaaa tactgcttta acttcaacat ctaaagttga
    10081 aaggtaattg atgaaatctt taacatctac agcttctccc catgttacgt cataaatgtg
    10141 cacatttttg taataagttt gtgcaatttg tttaaatcgg ttaccaaagg cacctgaaac
    10201 aatgacaacg aagtgatctt cagggtttac aatgttcaac atactagctt ctaagacgct
    10261 tgtaccgcta gatgttaaaa taagtacatc attttgactc ccaaatattg gctttagacc
    10321 ttgaaatgct tgttgtgcga tgtcttcaaa atctttagaa cgatgaccaa ccataggtgc
    10381 ttgaatttct ctcataatgg catcaggtac aggggttggg ccaggtgtta ataacaacgg
    10441 ttgatgataa tacatttata tgcctcctat aaataagatt tcactatttt agcaaatttt
    10501 ctgaaaattt aaaagcctaa aaaaagtgat aacgctatat tgtcgaataa acgttatcac
    10561 gtaacgattt tatttggcct gaatgatggg atagattttt atgtctacat tatttcttac
    10621 agcatttgaa atcatgcaat tattatctgc aattgttatc aattttggta atcgcttttc
    10681 taattgtgct atttgatcac ttggaatttc aatgtgagga tggtgcacaa tttttgacat
    10741 actgaatttt ccattattta aacaagctgt tccaatcgat tgttgttcaa ttgaaatatc
    10801 tgtgaacttt gcacgttcaa gagtagctgc taatgagatg atataacatg atgaagcggc
    10861 tgatactaac atttcatcgg gatttgttcc tataccaaca ccacctaaag aagcaggtat
    10921 tgaaatattc tctgaaagta tgtcgccttg aacgtttccg acattgttac gaccaccttg
    10981 ccaagaagtt tggactttaa agtcatgttg atgcaattgc tttaacctcc aatataattg
    11041 tgatagttta attttagaat agtttatcaa agtttaacag aaaggtgact tatcaatgac
    11101 tctgaataaa ctgaaagatg aattacaaat tgtttcgcac cgtggattac cgagtgattt
    11161 tcctgaaaat acaatggtcg gttatcgaga ggtaatgggg ctcaatgttg ctatgttaga
    11221 aatagatgtt catttgacca aagaccaaca ttttgttgtg atacatgatg aaacaattga
    11281 tagaacatcg gatggtaagg ggcgtattgc tgattacaca ttatcgcaat taaaatcatt
    11341 tgattttggt agttataaag atgttgcttt taagggagaa cgaataccca cgttagatga
    11401 agtactttca ttatgcttaa agtatgataa aaagctattg attgaattga aaagtccgaa
    11461 tttatatcca gaaatagaat gtaaattgct ggcatttttg gaagaaaaga aagtcgatgc
    11521 gacacaagta gttatacaat cctttgatat cgaatgcatc gaaaagttaa acacattggg
    11581 cagtatatat gaattaggtg tgctttgtag taaacgtaag tattggtata aaaagccaaa
    11641 cttttcaaga atttctcaaa ttgctagtta tgttaatcct aattatgcat tagtgaccag
    11701 aaaatttgtt gatgaagcac atcatcatca attacaggtt atgccatata cagttaataa
    11761 attgaaaact ggagaaaaat taagacaaat gggtgtagat ggattaatta cagataaccc
    11821 gaaattattt attaagtgag acgatgaatg gttatttgat agcgggatga ggattcgtat
    11881 atcgcaattg ataattttaa aaactaatga ggaaatatta tagataattc aacatataag
    11941 acttgtaaat tctaagttga ttgtaaaata gggtagctcg atataatctt gaatctatca
    12001 tttttaaatt aataaaaaaa acacccacaa ttgtgggtgt ttgtattgaa cggtattatc
    12061 ttgagtagta ctcaacgatt aattgttcgt taatttcagc aggtaattcg ctacgttctg
    12121 gtaaacgtac gaaagtacca gttaagctgt cagcatcaaa gtttaagtac tcaggtacga
    12181 aattgttgat ttcaactgat tcaacgatga tgtttaattt ttgagatttt tcacgaactg
    12241 aaattgtttg accaggtttt acagaataag atggaatatc aacacgttta ccatctacta
    12301 agatatgacc gtggttaact aattgacgtg cttgacgacg agtacgagct aaacctaatg
    12361 aataaacaac agcgtctaaa cgacttgcta ataagatcat gaagttttca ccgtgtacac
    12421 cgaatttttt accagcgatg tcaaatgtgt tacggaattg tctttcagtc attccatata
    12481 agtaacgtaa tttttgtttt tcacgtaatt gtaaaccata ttctgataat tttttacgtt
    12541 ggtttggacc atgttgtcct ggtgcgtaag gacgtttttc taattcttta ccagtaccgc
    12601 ttaaagagat acctaaacga cgagattttt tccagtttga acctctgaat cgagccataa
    12661 taagactcct cctttaattc ttttttgttg ttatgaataa acaaaaaaga gtgttgcatg
    12721 cttactaaga tatattgttt tatgtgtctt caccttatag cgacagttac gtgacacgtc
    12781 cgcattggga acaacatagc gctcaataat atacaactgc tactttcgtt aattcacaca
    12841 aagattattg taacattttc ctgctaactg tcaacacttt attgaaaatg ctgatgtcct
    12901 tttatgcgag ttgcttttca ataattttaa caattgcttc aagatgttct ttgtcattgt
    12961 catcaaatcg atccgttata ggggcatcga tatctaagac gccgataatt ttatcatctt
    13021 tgaaaattgg aacgacaatc tcagacttac tattagcatc acaagcgata tgtccttcga
    13081 attgatgaac atcagctaca atttgtgtac gacgttctga aacggctgta ccacatacac
    13141 cttttccaat tggaatgtgg acacaagcgg ggtgtccttg gaaaggtcca agtataagtt
    13201 cattttgttc caataagtaa aagccgaccc aattaatttg atccagatta tcatttaata
    13261 aggcagacat gttacttaaa atagcaatca tgtgatgttc atcttcaata aggcttgctg
    13321 cttgtttctt taataatgca tagtttgttg ggttaattgt tgtcatattt aaaacctctt
    13381 attttcatag attttataat agtatagaat ttcgaaaata ttatggcaat aaattcattt
    13441 tataatttat ccttaagcaa aattacgtta taatagtaat gataaattag gaggagaagc
    13501 atatggtgtt atatatcatt ttggcaataa ttgtgattat attgattgct gtaggtgtat
    13561 tattctattt acgttcaaat aaacgacaaa ttattgaaaa agcaatcgaa cgtaaaaatg
    13621 aaattgagac gttacctttt gatcaaaacc ttgcacaatt atctaagttg aatttaaaag
    13681 gtgaaacaaa aacgaaatac gatgcaatga aaaaggacaa cgtagaaagt acaaataagt
    13741 atctagctcc tgtggaagaa aaaatccata atgctgaggc tttattagat aaatttagtt
    13801 tcaacgcagc tcaaagtgaa attgatgatg caaatgagtt gatggatagt tacgaacaaa
    13861 gctatcagca acaattagaa gatgtaaatg aaattattgc gttatacaaa gataatgatg
    13921 aattatatga caaatgtaag gttgattatc gtgaaatgaa acgtgatgtt ttagcaaatc
    13981 gtcatcaatt tggtgaggca gcaagtctac ttgaaactga aattgaaaaa tttgagccaa
    14041 ggttagagca atatgaagta ctaaaagctg atggtaatta tgtacaagcg cacaaccata
    14101 tagctgcctt gaatgaacaa atgaaacagc taagatctta tatggaagaa ataccagaat
    14161 taattagaga aactcaaaaa gaattacctg gtcaattcca agatttaaaa tatggttgcc
    14221 gtgatcttaa agttgaaggg tatgatctgg atcacgtaaa agtagacagt acattacaaa
    14281 gcttaaaaac agagcttagt ttcgttgaac cattaattag tcgcttagaa ttagaagaag
    14341 ctaatgataa actagctaat atcaatgata agttagatga catgtatgat ttaattgaac
    14401 atgaagttaa agctaaaaat gatgtcgaag aaacaaaaga tatcattacg gataacttat
    14461 tcaaagctaa agacatgaat tatacattgc aaacagaaat tgaatatgta cgtgaaaact
    14521 actatataaa tgaatctgat gctcaaagtg ttcgtcaatt tgaaaatgaa attcaaagtt
    14581 taatttctgt atatgatgat attttaaaag aaatgtctaa atctgctgtt agatatagcg
    14641 aggttcagga taatttacaa tatttagaag atcatgtcac agtcattaat gacaaacaag
    14701 aaaagctaca aaatcatctg attcaattac gtgaagatga agcagaagca gaagacaatc
    14761 tgttacgagt acaatcgaag aaagaagaag tgtatcgtcg attacttgct tctaacttaa
    14821 caagtgttcc tgaaagattt atcatcatga aaaatgaaat tgatcatgaa gttcgtgatg
    14881 ttaacgaaca atttagtgaa cgtccaatac acgttaaaca gttaaaagat aaagtgtcta
    14941 aaattgtgat tcaaatgaat acatttgaag atgaagcaaa tgatgttctt gttaatgctg
    15001 tttatgcaga gaaattaatt caatatggaa atagatatcg taaggactat agcaatgttg
    15061 ataagagctt aaatgaagct gaacgattat ttaaaaataa tcgctataag cgtgcgattg
    15121 aaattgcaga gcaagctctt gaaagtgttg agccaggtgt cactaaacat attgaagaag
    15181 aagttattaa gcaatagaaa ctagtatgta gttatactta aataatatga gctctctgtc
    15241 aaattggact gatgagttta ataattgaag ttagccaact gtatgttgtc tagcttcttt
    15301 ttttatatgg atatatgaaa gggacaataa atataaatag caattgttta aagataaacg
    15361 taatcaaaag tgttgtttta attaatataa gtagtgaaaa aagcataatc acacagctgt
    15421 ttaatataga gtgaaatagt ctaattctta tttaataagt agaaataaga ttattttgcg
    15481 ctataacctt tattttttgt cggataatag tataatgctt gagtaaaaca attttaacga
    15541 ttgatgatta atgaaagaga agtgtttatt ttgatatatc tagataatgc ggcaacgacg
    15601 aaagcatttg aagaagtgtt agatacttat ttaaaagtaa atcaatcaat gtattataat
    15661 ccgaatagtc cgcataaagc tggtttgcag gcaaatcaat tactacagca agcaaaagcc
    15721 caaattaatg caatgattaa ttcaaaaaca aattataatg ttgttttcac gagtggtgca
    15781 actgaatcca ataatcttgc tttaaaaggt attgcctatc gtaaatttga tacagctaag
    15841 gaaataatta catccgtgtt agagcatcca tccgtattag aggttgtaag atatttggaa
    15901 gcgcacgaag gatttaaagt taattatgtt gatgtaaaga aagatggcag tattaactta
    15961 gaacacttca aagaattaat gtcagacaaa gtcggtttag taacatgtat gtatgtaaat
    16021 aatgtaacag gacaaataca gcctattcca caaatggctg aagttataaa aaattatcct
    16081 aaggcacatt ttcatgtaga tgcggttcaa gcattcggca aaatttcaat ggatttcaat
    16141 aacgtagata gtattagttt aagtggacac aagtttaatg gtttaaaagg ccaaggcgtc
    16201 ttacttgtaa atcacattca aaatgttgaa ccaactgtcc atggtggtgg tcaagaatat
    16261 ggcgttagaa gtggaacagt taatttgcca aatgatattg caatggttaa agcgatgaag
    16321 atagctaatg aaaactttga agcattgaat gcatttgtta ctgagttaaa taatgacgtc
    16381 cgtcaatttt taaataaata tcatggagtt tatattaact cttcaacttc aggttcacca
    16441 ttcgttttaa atattagttt tcctggagta aaaggtgaag tattagttaa tgctttttca
    16501 aaatatgaca ttatgatatc tacgacgagt gcttgttcat ctaaacgtaa taaattaaat
    16561 gaagtattgg ctgcaatggg attatcagac aaatctattg aaggtagtat aagattatca
    16621 tttggggcta ctacaactaa agaagatata gcaaggttta aagaaatatt tatcatcatt
    16681 tatgaggaaa ttaaggagtt gctaaaataa tgaagtatga tcacttgctt gttagatacg
    16741 gggagttaac attaaagggt tcaaatagaa agaaatttgt aaatcaatta agaaataatg
    16801 taaataagtc attaaaagga cttgatgggt ttgtcgttaa aggcaaacga gatcgtatgt
    16861 atattgaact tgaagaccat gcagatataa atgaaataac atatcgatta tcaaaaattt
    16921 tcggtattaa atctattagt ccagtattaa aagtagaaaa aacaatagag gcaatgagtg
    16981 cagcggcaat taaatttgcg cagcaatttg aagaaaacag cacatttaaa attgatgtga
    17041 agcgtgccga taaaaatttc ccaatggata cgtatgaatt acaacgtgaa ttgggtggta
    17101 ccgtattgaa acaaattgaa aatgtttctg ttaatgtcaa acgtccagat catgaaattc
    17161 gagtggaagt tagattagat gcaatttata tgtatgaaga agttgttccg ggttcaggcg
    17221 gattaccagt tggtactggt ggtaagacgt tactaatgct ttcaggcggt atagactcac
    17281 cagttgctgg aatggaagtg atgagacgtg gcgtaacaat tgaagcgatt catttccata
    17341 gtccaccatt tacaagtgat caagcaaaag aaaaagttat tgaattgaca cgtattttag
    17401 ctgaacgtgt tggaccaatt aaattgcata ttgtaccatt tacagaattg caaaaacagg
    17461 taaataaagt tgtacatcca agatatacaa tgacttcaac gagacgtatg atgatgcgtg
    17521 ttgctgataa attagtacat caaatagggg ctttagctat tgtaaatggt gaaaacctag
    17581 ggcaggtagc cagtcaaaca cttcatagca tgtatgcaat taataatgta acttctactc
    17641 ctgtattacg tcctttatta acttacgata aagaagaaat tattattaaa tcgaaagaaa
    17701 ttggcacatt tgaaacatct attcaaccat ttgaagattg ttgtacaatt ttcaccccta
    17761 aaaatccagt aaccgaacca aactttgata aggtagttca atatgaaagc gtctttgatt
    17821 ttgaagagat gattaatcgt gctgttgaaa atattgaaac acttgaaata actagtgatt
    17881 ataaaactat taaagaacag caaacaaacc aattaataaa cgacttttta taaataaaat
    17941 cctagagtaa atttaaacat aaggggatgt taaactatgg atttgaactt aacgatgatt
    18001 ataatcataa ttttatttgg ttttatcgcg gcgtttatag attcggttgt agggggtggc
    18061 ggtttaattt ctacgccagc attattagca atcggtctac caccatctgt ggctttaggt
    18121 acaaataaat tggcaagttc atttggttct ttaactagta cgataaagtt tataaggtcc
    18181 ggtaaagtgg acttatttgt tgttgccaaa ttatttggtt ttgtattttt ggcatctgca
    18241 tgtggcgcat atattgcaac gatggttccg tcacaaatat tgaaaccttt aatcatcatt
    18301 gcactttcgt cggtgtttat attcacatta cttaaaaaag attggggcaa tacacgtacg
    18361 tttactcaat ttacatttaa gaaagccata atatttgcag cactttttat attaatcggc
    18421 ttttatgatg gatttgtagg tgggggaaca ggttcattta tgctttttgt attgttaatc
    18481 tttggttttg attttttaag tgctgcagga aatgctaaag ttttgaactt tgcttctaat
    18541 ataggtgcgc ttgtattatt tatggtatta ggacaagtag attatgtaat aggtttaatt
    18601 atggctacaa gcatgattgc tgggtcatat actggagcac attttgctat caaacaaggt
    18661 gttgcctatg taaaagtatt atttattatt attactgcta ttttaatttt aaaaaatgct
    18721 tttgattata ttcaacaatt tgtataaaat taaatttgct tttgattaaa gcatgaaaat
    18781 tgtaatcaaa ccataaattg tcgtatgatg tagttagaat tttaaaatgc aggaggtcaa
    18841 gtatatgact gaaataacat tcaaaggtgg accaatccac ttaaaaggtc aacaaattaa
    18901 tgaaggtgat tttgcacctg attttacagt gttagataat gacttaaatc aagtaacatt
    18961 agcagattat gctggtaaaa agaaattaat tagtgtggta ccatcaattg atacaggtgt
    19021 ttgtgatcag cagactcgca aattcaactc tgaagcttct aaagaagagg ggattgtgct
    19081 tacaatttca gcagacttac cattcgcaca aaaaagatgg tgcgcttcag caggtttaga
    19141 caatgtcatt acattaagtg accaccgtga cttatcattt ggtgaaaact atggcgttgt
    19201 tatggaagaa cttcgcttat tagctcgtgc agtatttgta ttagatgcag ataataaagt
    19261 tgtttataaa gaaatcgtta gtgaaggtac tgatttccca gattttgatg ctgctttagc
    19321 tgcatgcaaa attatttaat cattaaagag ataaatctta aaatgtatac atcgtgtcca
    19381 tcgttgtcaa cagcattaaa atagaattgt tttctatgat tgctaagacc tatgggcact
    19441 ttttattgga gagggacgaa tatggcagaa caacaaacaa ttatggaacg cttgtttcat
    19501 acattagatg aaaaagctaa aacattaaat aatgaaaatg gccaaagttt tattgaaaat
    19561 cttgggctag caatggaaca agtatatacc aatgaaagag gattgttaga acaatcgacg
    19621 ttacaagatc gacgtaaagc attccaattt gcatatttaa gtttaatgca ggaagaaaag
    19681 atacaagcaa atcatcaaat tacaccagat tcaattggat tgatactagg atttttagtt
    19741 gagcgtttta tgaacaacca agaagaatta catattgttg atattgcaag tggtgccggt
    19801 catttaagtg ctactgtaaa agaagtgtta cctgaaattg cggttatgca tcatttaatt
    19861 gaagttgatc cagttttatc acgtgttagt gtacatttag caaacttctt agaaattcct
    19921 ttcgatgtgt atcctcaaga tgccatcatg ccactaccat tagaagaagc agatatcgtt
    19981 attggtgatt ttccagtagg ctattatcca attgatgaaa gaagtaagga gtttaagcta
    20041 ggttttgaag aaggacatag ttattcacat tatttattaa tagaacaagc aataaatgca
    20101 ttaaaagatg ctggatatgc ctttctagtg gtaccaagta atatttttac aggtgaacat
    20161 gtaaaacagc ttgaaaaata tattgcaaca gagacagaga tgcaagcatt tttaaattta
    20221 ccaccaa
//
LOCUS       DAKPJH010000045        20041 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.045, whole genome shotgun sequence.
ACCESSION   DAKPJH010000045 DAKPJH010000000
VERSION     DAKPJH010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20041
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.045"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(37..987)
                     /locus_tag="OY092_001342"
     CDS             complement(37..987)
                     /locus_tag="OY092_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCX1076292.1"
                     /translation="MKVVGLNRMREVETELQQSFSDLDFKFYKKASEIPESDLADLDI
                     LVGYDGGINEAFLRRCPNLKWIAWFATGVNTLPLDYIADHGILVTNGKGVQAKQLSEY
                     ILAFILDDYKKMKLSYDNQRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFN
                     MNLIGLSKSGQNKDEFDEIYTIESLESTLPNADIIINALPETQETIHLLKKKHFELMK
                     DEALFINIGRGSIVKESLLIEVLKSRVIRHAYLDVFENEPLKPNHELYELENVTITAH
                     ITGNDYEAKYDLLDIFKNNLVNFLNKNGLIENEVDAKKGY"
     gene            complement(993..1448)
                     /gene="bcp"
                     /locus_tag="OY092_001343"
     CDS             complement(993..1448)
                     /gene="bcp"
                     /locus_tag="OY092_001343"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HCX1076293.1"
                     /translation="MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTC
                     TTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETG
                     VYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG"
     gene            1529..2818
                     /locus_tag="OY092_001344"
     CDS             1529..2818
                     /locus_tag="OY092_001344"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HCX1076294.1"
                     /translation="MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHG
                     AYLYDVDGNKFIDYLQAYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSQKL
                     RDAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGP
                     SQLGSPDSAGVPESVAREVITVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP
                     QPGFLEEVNEISHNNGTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPI
                     GGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQL
                     EEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQG
                     INLAPSKFEAWFLTTEHTEEDIKQTLKAADYAFSQMK"
     gene            3111..4205
                     /locus_tag="OY092_001345"
     CDS             3111..4205
                     /locus_tag="OY092_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HCX1076295.1"
                     /translation="MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQP
                     SIYRSFKTVSDQALGNIIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVAT
                     LASVTALIIMGQHTGSFYITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNI
                     SSDIFMWFKLVLNDTTEFNNIKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNR
                     KKILFREVVQTTRQAYEVLNKLSRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASL
                     SKKARYNVTHVDYELDNPQKKDLLSTFQHELINHPYQTEYSFANVMQIVAAIEEYRHH
                     LEHLDRIRISFFTYHRSDADIEIVEEDFDL"
     gene            complement(4295..4387)
                     /locus_tag="OY092_001346"
     CDS             complement(4295..4387)
                     /locus_tag="OY092_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076296.1"
                     /translation="MFDFSTILKRKFVTGWWGHNIEKAVRDFLN"
     gene            complement(4396..6132)
                     /locus_tag="OY092_001347"
     CDS             complement(4396..6132)
                     /locus_tag="OY092_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAV1866 family putative multidrug efflux ABC
                     transporter"
                     /protein_id="HCX1076297.1"
                     /translation="MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGV
                     INNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYN
                     HLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD
                     VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAI
                     EDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSIT
                     VGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIE
                     IKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD
                     VTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEA
                     AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSAL
                     DLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELMSKQ
                     GAYEHLYSIQNL"
     gene            complement(6424..6966)
                     /locus_tag="OY092_001348"
     CDS             complement(6424..6966)
                     /locus_tag="OY092_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HCX1076298.1"
                     /translation="MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGG
                     NDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEAL
                     KYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
                     PFAPDFIKVWKERYKKIRQY"
     gene            complement(7268..8305)
                     /gene="mutY"
                     /locus_tag="OY092_001349"
     CDS             complement(7268..8305)
                     /gene="mutY"
                     /locus_tag="OY092_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HCX1076299.1"
                     /translation="MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQ
                     VKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEG
                     LVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQST
                     RKSYEQELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKL
                     PVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRSEKLLHGMWQFPMFESEHARHEMTEKI
                     GHDIQPVETPIFELKHQFTHLTWKIKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPV
                     PMSKIYQFING"
     gene            8457..9434
                     /locus_tag="OY092_001350"
     CDS             8457..9434
                     /locus_tag="OY092_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCX1076300.1"
                     /translation="MDTATHIAIGVGLTALATQDPAMASTFGATATTLIVGSLIPDGD
                     TVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFTFFSGTNPFHVWMWAQLAVFL
                     HVFVDIFNSYGTQALRPITNKWIQLSVINTFDPIIFTVLCIGIVLWVIGLHPFAVFFP
                     IIALLIIYYMIRFKMRAVIKQQALKAIQQEHHPVKVFVAPTIKFMEWRVAIQTDAHDY
                     VGKAYGRNVVFSDKVERQTLSTDSILWKVKGNKDIRTFLNFSSIYRWQTTTLADGSTE
                     IRLIDLRYLKNDHYSFVAIAHVTNDNVIDHSYIGWVFTEDKLQRKLYAK"
     gene            complement(9695..10531)
                     /locus_tag="OY092_001351"
     CDS             complement(9695..10531)
                     /locus_tag="OY092_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076301.1"
                     /translation="MLDNIILYFKNLPHTKRYVTERLKQSWKSFLIVLAACLILIIAS
                     ETLFSFSHLTDVKEVRWLFRIIALIVFAVVMFTIYISYHHYMNDFLVTKLFNISAATP
                     VVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLL
                     TEKINIIFYGVCVLCILLLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISS
                     MENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSNDSTDEADT
                     SS"
     gene            complement(10540..12057)
                     /locus_tag="OY092_001352"
     CDS             complement(10540..12057)
                     /locus_tag="OY092_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076302.1"
                     /translation="MGSSIVLKLLKVTHYYRNKQNKKWYLPFGYDAEDIDLNNISLHI
                     YQGEALGIIGEPESSKALVGQLLAGAIKPDKGKVVCTEDLFYGYIEDQSLIHQTVEAY
                     TAQLVQLFPYEINDHKAEQIIQYAHLGDFKTKPVNHISKAAYAQLLLSIARSSKSNII
                     ILNHVIDYLTPQFMERAIELTNDYIENNLTIVSIGDDIDKISQVSNYIAWFSHGQLRM
                     EGSLKQVIPSFKEHERDRLSLNSKEEIENFDLDWKKNRTRIPEMTYNFKRVERYNHAK
                     PPKFLVRFWTLASGTILGLALMMLLIFNNIGIISITDFTNRATMQNENKDPYGEKLAY
                     GIAFNGSVDMQGDKQVTIPKYSVVTITGENSKNYRVTADNKTYYVSKDKLEYFNPAGL
                     YQTHSFKKLAPYMKSNYSNYYAYFNSQLHKKHSSVIKTLVPDDDNRFVASVTQQPIQL
                     LFNDNNQLYGFVYPIVDKKELKDKFNINNNIWITKVGNGYCIANLKEDKWIYIEL"
     gene            complement(12072..12386)
                     /locus_tag="OY092_001353"
     CDS             complement(12072..12386)
                     /locus_tag="OY092_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhH family protein"
                     /protein_id="HCX1076303.1"
                     /translation="MEQKKLSEMSEPELRHEIQLYKEKMRKSEMNGILNEYDVYQSKV
                     IVAESYLVDRKKIEIGKIYKLTDGSNQYFKVERLKGIFAWGFRFNSDEPEEGLPIALL
                     QL"
     gene            complement(12364..13182)
                     /gene="recX"
                     /locus_tag="OY092_001354"
     CDS             complement(12364..13182)
                     /gene="recX"
                     /locus_tag="OY092_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HCX1076304.1"
                     /translation="MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQ
                     LEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCY
                     REKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
                     IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQ
                     RDLEKIYNKNRKKYTQQKLISKTIEGLMRKGYKYDKIKAKLEESGIADGTEEIE"
     gene            complement(13443..14252)
                     /gene="sgtB"
                     /locus_tag="OY092_001355"
     CDS             complement(13443..14252)
                     /gene="sgtB"
                     /locus_tag="OY092_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional peptidoglycan glycosyltransferase
                     SgtB"
                     /protein_id="HCX1076305.1"
                     /translation="MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILL
                     KILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDE
                     RFYNHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA
                     HRVEKQCNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAI
                     LASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQLNR"
     gene            complement(14593..15108)
                     /locus_tag="OY092_001356"
     CDS             complement(14593..15108)
                     /locus_tag="OY092_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HCX1076306.1"
                     /translation="MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVV
                     GKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTF
                     AICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLD
                     DFNREIVKQLQ"
     gene            complement(15239..15400)
                     /locus_tag="OY092_001357"
     CDS             complement(15239..15400)
                     /locus_tag="OY092_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076307.1"
                     /translation="MNEQQTIEQIKARLNKFIEDIDHVNPDEVRVEDIDEWIGLLDQL
                     EEKVKLVSK"
     gene            15624..16775
                     /gene="yfkAB"
                     /locus_tag="OY092_001358"
     CDS             15624..16775
                     /gene="yfkAB"
                     /locus_tag="OY092_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/CxCxxxxC motif protein YfkAB"
                     /protein_id="HCX1076308.1"
                     /translation="MNSVKLKQPVSIYNDPWESYNDVKEHSQLTLSNIEFTTTNLCNM
                     RCSHCAVGYTLQTVDPEPLDMDLIYRRLDEIPNLRTMSITGGEPMFSKKSIRNVVKPL
                     LKYAHHRGIYTQMNSNLTLPQDRYLDIAEYIDVMHISHNWGTTDEFANVGFGAMKKQP
                     PLKAKLKLYEQMISNARTLSEQGMFVSAETMLNQSTLPHLRKIHQEVVHDMKCSRHEI
                     HPMYPADFASQLNVLTLAEMKKTIHDILDFRDEDIWMLFGTLPVFPCLKDDEDQKLLS
                     RLRNAKNVTTRNDPDGRSRLNVNVFTGNVIVTDFGDETGTISNIQKDKLTDVFDKWLS
                     SDLAKSLNCHCSEFSCLGPNVLVKNMYYPNMDFKDNERHMHKQPQIIQF"
     gene            complement(17035..17565)
                     /locus_tag="OY092_001359"
     CDS             complement(17035..17565)
                     /locus_tag="OY092_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HCX1076309.1"
                     /translation="MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDE
                     IAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDD
                     VFNNKHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIE
                     SKQTIEYLAQVQHIRD"
     gene            complement(17655..18911)
                     /locus_tag="OY092_001360"
     CDS             complement(17655..18911)
                     /locus_tag="OY092_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HCX1076310.1"
                     /translation="MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTH
                     LIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHELKSYDVEARMDYVKRGAA
                     NLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKR
                     VYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYV
                     SEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPL
                     SYNGTIIDQFKLMFKDGEIIDFSAEKGETVLKDLINTDEGSRRLGEVALVPDDSPISN
                     RNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSS
                     DLTIYGIFEDGSKELVFENGNWASTF"
     gene            complement(18914..19114)
                     /locus_tag="OY092_001361"
     CDS             complement(18914..19114)
                     /locus_tag="OY092_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 family protein"
                     /protein_id="HCX1076311.1"
                     /translation="MTNEEKVLAIREKLNIVNQGLLDPEKYKNANEEELTDIYDFVQS
                     RERLSPSEVTAIADALGQLRHD"
     gene            19261..19725
                     /locus_tag="OY092_001362"
     CDS             19261..19725
                     /locus_tag="OY092_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HCX1076312.1"
                     /translation="MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW
                     NLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKG
                     QLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG"
     gene            19732..20007
                     /locus_tag="OY092_001363"
     CDS             19732..20007
                     /locus_tag="OY092_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HCX1076313.1"
                     /translation="MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTR
                     KPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR"
BASE COUNT         6546 a         3469 c         2849 g         7177 t
ORIGIN      
        1 attgcgcgcg tgtcaatatt tacatgatga tttcatttaa tagccttttt tagcatcaac
       61 ttcattctca attagaccat tcttattgag aaaattaact agattgtttt taaaaatatc
      121 taataagtca tactttgcct cataatcatt accagttata tgcgctgtta tagttacatt
      181 ttccaattca tataattcat gattaggttt caaaggttca ttttcaaaca catctaaata
      241 cgcatgtcga ataactctac tttttaatac ttctattaag agcgattctt taactatgct
      301 acctcgtcct atatttataa aaagtgcttc atctttcatt aattcaaaat gttttttctt
      361 tagtaaatga atcgtttctt gcgtttctgg taaagcattt ataataatgt cagcatttgg
      421 taatgtgctt tcaagtgatt cgatagtata tatctcgtca aactcatctt tgttctgacc
      481 tgacttgctc agaccaatta aattcatatt aaaagccttt gctaacttcg cagttctagt
      541 agcaattgca cctgtaccta aaaataaaac tgtttgtcct gataggcgtt taccagttat
      601 tttcgaatca tatatatgtt gtcgttggtt atcatatgat agtttcatct ttttataatc
      661 atctaaaatg aaagctaaaa tgtattcaga taattgttta gcttgaacac cttttccatt
      721 agttacaagt atgccgtgat ctgcaatata atctaacggt aatgtattta cacccgtagc
      781 aaaccatgca atccatttta aattcgggca acgtcgtaaa aatgcctcat tgataccgcc
      841 atcataacca actaatatat ctaaatcagc caagtcgctc tcaggtattt ctgatgcttt
      901 tttataaaat ttaaaatcta aatctgaaaa gctttgttgt aattcagttt caacttcacg
      961 catacgattt aacccaacaa ctttcatata tgtcacccca aaatgttttt aagttcttct
     1021 atttgtgttt taaccttaac cttctcgata acatctaata ctttgccttg ttcatctatt
     1081 ataaaagtcg ttcttacaat gcccatactt tctttgccaa atgatttttt caactgatat
     1141 acgccagttt ctttagctaa tttaaaatct tcatctacta ataaatcgaa attcaatccg
     1201 tgtttctcaa taaaattttg gtgttttttc tttgaatcac cgcttatacc atatactgca
     1261 acatctaaat cattgaacat ttctaaattg tctctaaagt cacaagcttc tgtggtacaa
     1321 gtaggtgtat tatctctagg ataaaaatat ataatcgcct ttttaccttt taatgtatca
     1381 tttgtaatga cagttccgtc ttgattttct aatttaaata ttggaaattg ttctcctttt
     1441 tgcaacatat aatcaccttt ttcttcatta taataatttt atgatacgat attagatgaa
     1501 aatattaaat taaaagaggt tgatataaat gaattttagt gaaagtgaac gtttacaaca
     1561 actttcaaac gaatatattc taggcggtgt caattcccct tctcgttctt ataaagctgt
     1621 aggaggcggt gcacctgttg ttatgaaaga aggacacggt gcatatttat atgatgtcga
     1681 tggcaataaa tttattgatt accttcaagc atacggtcca attattacgg ggcatgcaca
     1741 tcctcatatt actaaagcaa ttcaagaaca agcagctaaa ggtgttttat ttggtacacc
     1801 gactgaacta gaaattgaat tcagccaaaa attacgtgat gcaattccat ctcttgagaa
     1861 aattcgcttt gtaaattctg gaacagaagc agtcatgaca acaattcgtg ttgcacgtgc
     1921 atatactaaa agaaataaaa ttataaaatt tgctggatct tatcatggcc attctgattt
     1981 agtattggtt gcagcaggta gtggcccatc tcagctcggt tctccagact cagctggtgt
     2041 tccagaaagc gtcgcacgtg aagtcattac tgtacctttc aatgatatta acgcatataa
     2101 agaagcaatt gaattttggg gtgatgaaat tgccgcagta ttagtagaac caattgttgg
     2161 taactttgga atggtaatgc ctcaacctgg atttttagaa gaggttaatg aaatttcgca
     2221 taacaatggg acactagtga tttatgatga agtaattact gcattccgtt tccattacgg
     2281 tgccgctcaa gatttattag gtgttatccc tgatttaact gcatttggta aaattgttgg
     2341 cggtggttta ccaattggag gctatggtgg acgtcaagat attatggaac aagtagcacc
     2401 tctaggacct gcatatcaag ctggtacaat ggctggtaac ccattatcta tgaaagcagg
     2461 tattgcatta ctcgaagtac tagaacaaga cggtgtttat gaaaaattag acagcttagg
     2521 ccaacaacta gaagaaggtt tacttaaatt aatcgaaaaa cataatatca cagctacaat
     2581 taatcgtatt tatggatctt taacattgta ctttacagat gaaaaagtca cacattatga
     2641 tcaagttgaa cattctgacg gcgaagcgtt cggtaaattt ttcaaattaa tgttaaatca
     2701 aggtatcaat ttagcacctt ctaagtttga agcttggttc ttaacaactg aacatacaga
     2761 agaagatatt aaacaaactt taaaagctgc agactatgct tttagtcaaa tgaaataact
     2821 tttaaggaag tatattttta attgaattaa aataaagcaa atgctcacat agtagattca
     2881 ttttatatcg ttaactatta acgtttaact tgatatgtca ctatgtgagt ttttatttta
     2941 caaatttata ctcttttaat ctctgactaa agttttacat cactatcagt attatgtatg
     3001 atttatttta acaactataa ataagcttga attttgtaac tagtaagtgt ataacagtaa
     3061 tgaatacgaa tattagatat tcaataaact taaaaggggc gtcattattt ttgagactag
     3121 gagctcggat ttttaaaact ggtatagcca ttattttagc tatgtctatc gcttctttac
     3181 taccggatga tgttggtctg aaagccttag ctggtgtcag tgctgttgtt gcaatgcaac
     3241 ctagtattta tcgttcattt aaaacagttt ctgatcaagc attgggtaac attataggtg
     3301 ccatactatc tgttacaatg gtaacaattt ttagtgataa ttttatcatt atgggtgtta
     3361 ccgtcatagt acttattgct attttattta aatttaattt agcacatgtt gctactttgg
     3421 cgagtgtaac agcattaatc attatgggac aacataccgg ttctttctat attaccgcct
     3481 tttacaggtt tgtacttgta atgattggtg tcataagttc atctctagtt aactttgtgt
     3541 ttctaccacc taaatttgaa acaaaaattt actataattc attaaatata tcctcagata
     3601 tttttatgtg gtttaaatta gtattaaatg atacgacgga gtttaataat attaaacaag
     3661 atagtcataa tttaaaacaa cgtgtcgaaa agttagagaa aatttatgat tactatagcg
     3721 aagaacgtcc tattacaaaa aaacatattc accaacagaa tagaaagaaa atacttttca
     3781 gagaagtagt tcagacgact agacaagctt atgaagtatt aaacaaattg tcgcgttatc
     3841 aaaacgactt atatttactt aataacaatt tcctattaca aatcaaatta gatttagatt
     3901 cattaactgc ttttcacgag caaattttag ctagcctttc taaaaaagca cgttataatg
     3961 tgacacatgt tgattatgag ttagataatc cgcagaaaaa agatttattg tccacatttc
     4021 agcatgagtt aataaatcat ccttatcaaa cggaatattc gtttgccaat gttatgcaaa
     4081 ttgttgcagc catcgaagag tatcgacacc atttagagca tttagaccgc ataagaatta
     4141 gctttttcac atatcataga tctgatgcag acattgaaat tgttgaagaa gactttgatt
     4201 tataagttta aagcaattcc tgtaattaat accacaatga gataaagtaa tattgaatct
     4261 cgaaattaaa ttaaaaaaag cagtaagatt attttcaatt aagaaaatct cttactgctt
     4321 tttctatgtt atgaccccac catcctgtta caaattttct cttcaagatt gtactgaagt
     4381 caaacaacta atactttata agttttgaat gctatataaa tgctcgtaag caccttgttt
     4441 tgacatcaat tcacgatgcg tacctgtttc aacaatatgt ccattttcaa ttacgacaat
     4501 tttgtcagca tgtgtaatag tggacaagcg atgcgctacg ataagtgtcg ttcgatcttt
     4561 actcaacaca tctaatgctt cttgaataat ggattcactt tctaaatcaa gtgcacttgt
     4621 tgcttcatcc aagataagaa ttggcggatt atttaaaaat attctagcaa tcgataatct
     4681 ttgtttttga ccacctgata atttaacacc tcgttcacct acttcagtgt catatccctg
     4741 tggcaagttc ataataaagt catgtgcatt agccattttc gccgcttcaa ctacttcttc
     4801 atctgttgct gttggacgac caagtaaaat attttcctta actgtatcag agaataaaat
     4861 attatcctgt tgcaccaatc ctatttgatt tcttaaactt cccgttaaaa aatctttaat
     4921 gttgtgacca tctattaaaa tttgcccaga agttacatcg taaaatctcg gtattaagtt
     4981 aattaatgtt gatttaccac caccactcat acctacgaaa gcaactgttt ctcctttttc
     5041 aatactcaaa ttaatatctt ttaaaattgg agcttcgtta tcgttatatt gaaaactaac
     5101 atgatcaata tcaatacgac cttgtttaat ttcaataggt tgagcaccaa caccattttt
     5161 aatgtcataa tcttcgtcaa ttaattggaa tacacggtcc attgaagcaa aactttgcgt
     5221 taaagttgta aatgatgcga ctaaacgacg taaaggcccg aacaataact ctaagtatcc
     5281 aacaaatgct gcaagtgtac ctactgtgat tgatccagaa atagcaagat atgcaccaac
     5341 accgatgaca attattggtc caatatctgt aactgtatta attgcggcaa aggaataggc
     5401 attccatctt gtatgtttca aagcacgtgt taagaaatta gtgttctttt tatcaaagtt
     5461 tttcgcttca ttgtcttcaa tcgcaaaact tttaacgact gaaatacctt gaacacgttc
     5521 atgcaagaat ccttgaacct cagctaatgc ttgcgatctc tcacgcgtca attttcttaa
     5581 tcttccaaag aaaacgtaca ccgttaaaat gtaaaatggg aagataaaca gtgctgctaa
     5641 agtcaatttc acatctaaaa agaacattat ggatagtgca ataataattg ttatacaatc
     5701 taaccaaata ttcattaacc cggttaaaat gaaatctttt gtttgttcaa catcattaat
     5761 cactctagat attacttgac ctacttgatt attagcataa aatctcgcac ttaaagcttg
     5821 taaatggttg tataactttt tacgtatatc atacaatatt ttattacttg tccattgcgc
     5881 caaatattga cgtataaatt caattggtgg tctcactatt acaaaaataa ataatgcgat
     5941 accaatggca atagttaaat gatgaacttt ttcatcagtc gttagtgcgt ggttattaat
     6001 cacgccatct attgcatatt taattaaaag tggtataagc attggtatac caaacttaat
     6061 tattccaaca ataatcgttg caaaaatacg atatttgtat ggcttaacaa attgcaaata
     6121 tcgtttaatc atacaatccc cccctaatct attgccctat cctattcata agcataaaaa
     6181 tgaatagagg ttggatacat aatttgtaga tgtaaattct tcttacaatt tacattttta
     6241 aaattaagat atctcaacct ctgtcatatt catgtgatta aatacgttgt cttattcgta
     6301 tgttatattc tattcaattt aatctatgga tactgtgtcc ccacacgaca gcaaaagtta
     6361 tcatacttct ttacatcact aagtcaatat aaatgattta atcagtattt acactttatt
     6421 tgcttaatac tgtctaattt ttttgtaacg ttctttccaa actttgataa aatctggcgc
     6481 gaatgggccc ttcttctgtt ctatccattg ttgaagaatg tccacgttgc gtcttaaaat
     6541 aatatcaata tcatgcggat aattcatttg attcatatgt tgctcatatt catcttcatc
     6601 taataaatga tactttccgt ttggatatac tttaatatct aaatcatagt ctatatattt
     6661 taatgcctct tcatcacaaa caaatggtga tgacaaattg caatagtaat aaattccatc
     6721 ttctctaaac atgcagataa cattaaacca atattctgag tgaaagtaaa caattgccgg
     6781 ttcacgtgtt atccaagttc ttccgtcact ttcagtcact aacgtatgat cattgccacc
     6841 aatgacaaca tgatcagtac cctttaatat tgttgtttca gaccaaacgc gatgaatctt
     6901 accatcatgt ttataactct gaattttaat gttttcccct tctttaggta tggattctct
     6961 gaccatactc cacaccacct tctgttaatt taaccattat aaattatagc atatttcaga
     7021 aatagtatta tataaataca tatttttacg aaataagatt ttactactta ataattaaac
     7081 tcggtaatat tgctaagtac tgcaacagag atttacatgt cccatttaaa gtatataaaa
     7141 tcatcacttt tatatatcaa cactttaact ttttgacatt gttattctat gagatttaaa
     7201 gatatcattt atacttttta aaattaatgt cactatgttt tccgataata ttaccaatca
     7261 tcgaatgtta cccatttata aattgataaa tctttgacat aggtacaggg aatgtatatt
     7321 gatctcgatc acttaaatca aaccaaatca tgtcatctgg taatgtttca atgttaattg
     7381 ctcctgaaac ggcgtatact ttaatcttcc atgttaaatg agtaaattga tgcttcaact
     7441 caaaaatagg tgtttctact ggttgaatgt catgaccgat tttttcagtc atttcatgtc
     7501 tagcatgctc actttcaaac ataggaaatt gccacatacc atgcaataat ttttcgctac
     7561 gcttttgcaa cagatattga ccttgattat ttctaattaa aaagacggat tgctcaatta
     7621 cttttttact tacattttta gatttaacag gtaacttttc aaatgtacct ttatcaaatg
     7681 cctcacagtt ttcttgaact ggacaaaata agcataatgg attttttggt gtacaaatta
     7741 atgcccctaa ttccatcata gcttgattaa acgttccagc ttctgtagta acatacggta
     7801 acaattcttg ttcgtacgat ttcctcgtcg attgtaattt aatatctcga tagtcatcat
     7861 tcaatctaga ccatactcga aaaacatttc cgtctacagt tgctagtggt acattatatg
     7921 caatgctcat tactgcagct tgtgtgtatg ggccaacacc ttttaacgct ttaaattgat
     7981 caggatcttt gggaactaag ccttcatatt tatcataaac ttctttaatc gccgtatgaa
     8041 aatttcgagc tctactataa tatcctaagc cttcccaata ctttaacact tcatcttccg
     8101 aagcttgact caaaacttcc acagttggaa atcgttcaac aaaacgatga taatagtcaa
     8161 taactgtttt aacttgtgtc tgttgtaaca tgacctcact taaccaaata tagtacggat
     8221 tggtcgtttg tcgccatggc atttctcttt gattttcatc aaaccagtgt atcaaatttt
     8281 ctttaaaact agactgctga tacatttata aaaccctttc ctcaccaaaa ttaattgtct
     8341 ttactcataa tgtttttatt gtacattaaa atcatggtta gtatgtaagt taatttagtt
     8401 atttgcgaaa ttggattata atagtatata taatattatg aaatgagtga actgatatgg
     8461 acactgcaac acatatcgca attggggtgg gccttacagc acttgcaact caagatccag
     8521 caatggcttc tacgtttggt gcaacagcta caacccttat cgttggttca ttaattcctg
     8581 atggggatac tgttcttaaa ttaaaggaca atgcaacata tatttcgcat catagaggta
     8641 tcacgcattc catccctttc acaatactat ggccaatttt aattacattt ttaatattca
     8701 cgttctttag tggaaccaac ccatttcatg tatggatgtg ggctcagctc gcagtatttt
     8761 tacatgtctt tgtagatata ttcaattctt atggtacaca agcacttaga cctatcacaa
     8821 acaaatggat tcaattaagt gtgattaaca catttgaccc tattattttc acagttcttt
     8881 gtattggtat tgtattatgg gttataggct tgcatccatt tgcagtcttc tttcctataa
     8941 tcgctttact aatcatttat tacatgattc gttttaaaat gagagccgta attaagcaac
     9001 aagctttaaa agcaattcaa caagagcatc accctgttaa agtatttgtt gcgccaacaa
     9061 taaaatttat ggaatggcgt gtcgcgatac aaactgatgc acatgactat gttggaaaag
     9121 catatggtag gaatgtggtg tttagtgata aagtggaacg tcaaacatta tcaacagact
     9181 ccattttatg gaaagtcaaa ggtaataaag atatacgtac ttttttaaac ttttcatcaa
     9241 tctatcgttg gcaaacaaca acgttagcag atggttctac tgaaattcgt ttgattgatt
     9301 tgcgttattt aaaaaatgat cattattcat ttgtggcaat tgcacatgta acaaacgata
     9361 atgtcataga ccactcttat attggctggg tatttacaga agataagtta caacgtaaac
     9421 tgtatgctaa ataatttcaa gttattattc actaaagtta atctataaaa aatgaacaac
     9481 cgggcagaat gaaaatcaaa acgattttta ctctgtccgg ttttttaatg taaaactatg
     9541 aatgctttta caaaatctaa aatttatatt gttgctaaca aactaccttt aatgactcga
     9601 aatatcaaaa tcagtatagg aaaacaatat ctagatgata ttctaattgt ttctgattct
     9661 cacagattaa tttacacaac aggtcagcta aacatcatga agaagtatcc gcctcgtctg
     9721 tactatcatt tgaaacatcc tgttgattat cagtttgtgt cactttagat gttttattat
     9781 aaattgcgtg tgtcgtatac cttgctaata cgaaatttac tgcagctatt aaacataaga
     9841 ataaaataaa gtaaaaatga tatggaatgt tttccatact tgatatacca aatatgatag
     9901 attgtgctat accattaaca atgtaataca ttggattcag cattaggatg tgattgataa
     9961 atacatgatt tggatttggt atgaaaataa ttggtaacaa taagatacac aatacacaaa
    10021 ccccataaaa tatgatattt attttttcag ttaacagtcg aataagacca aaagtaacgg
    10081 atattaatcc tacaaaaata gttgccatca caataaaata gaatagcgct atatatgatg
    10141 tttcgaagtt tactggttta accaatgcac taatcatcgt caaaatgact agcataataa
    10201 aacttaaaat agacataata actactggcg tcgctgcgga aatattaaat aacttagtaa
    10261 ctaaaaagtc attcatataa tgatgataag agatataaat tgtgaacatc actaccgcaa
    10321 aaacaatcaa tgcaataatt ctaaataacc atcgcacctc tttaacatcg gtcaaatgac
    10381 taaaggaaaa tagcgtttca cttgcaataa taagtattaa acatgcagct aatacgatta
    10441 gaaaactttt ccaactttgt tttaaacgtt ctgttacata ccttttagta tgcggtaagt
    10501 ttttaaaata taaaataata ttatctagca tctttacacc tacaattcaa tataaatcca
    10561 tttgtcttct ttcaaattgg caatacaata tccattccca actttagtaa tccaaatgtt
    10621 attgttaata ttaaacttat cttttaattc ttttttatct acaattggat aaacaaaacc
    10681 atataactga ttattatcat tgaaaagtaa ttgtatcggt tgttgtgtaa cggatgcaac
    10741 gaaacggtta tcatcatcag gaactaaagt tttaataact gaactatgct ttttatgtaa
    10801 ttgactatta aagtatgcat agtaattact ataatttgat ttcatatatg gtgctaattt
    10861 tttaaaacta tgcgtttgat ataaacctgc cgggttaaaa tattctaatt tatctttact
    10921 aacatagtaa gtcttattat cggcggtaac acgataattt ttactatttt cgccagtaat
    10981 tgtaactaca ctatattttg gaattgtgac ttgtttatcc ccttgcatat ccacactgcc
    11041 attaaaagca attccataag ctaacttttc gccatatgga tctttatttt cattttgcat
    11101 cgtagcacga ttcgtaaaat ctgttatcga aataattcct atattattga aaatgagcaa
    11161 catcatcaat gctaagccta aaatggtacc tgaggctaaa gtccaaaaac gcactaaaaa
    11221 cttaggcggt tttgcatgat tatagcgctc aacacgtttg aaattatagg tcatctctgg
    11281 tattcttgta cgattctttt tccaatctaa atcaaagttt tcaatttctt cttttgagtt
    11341 tagacttaat cgatcacgtt catgttcttt aaaagatgga ataacttgtt taagtgaccc
    11401 ttccattctt aattgaccat gtgaaaacca agctatgtag ttactcactt gtgaaatttt
    11461 atcaatatca tcaccaattg acacaatcgt taaattattt tcaatataat catttgttaa
    11521 ttcaatcgca cgttccataa attgtggtgt taaatagtca ataacatgat ttaaaataat
    11581 aatatttgat tttgatgagc gtgcaatact taatagtaat tgagcgtatg ccgctttcga
    11641 tatatggtta accggcttcg ttttaaaatc gcctaaatgt gcatattgaa taatctgttc
    11701 agctttatga tcattaattt catatggaaa tagttgaact aactgcgctg tataagcttc
    11761 aacagtttga tgaattaacg attgatcttc aatatatccg tagaacaaat cttcagtaca
    11821 aactacttta cctttatcag gtttaattgc acctgccaac aattgaccta ccaacgcttt
    11881 ggaagattca ggttcaccaa ttatacctaa tgcttctcct tgataaatat gtaaactaat
    11941 attgtttaaa tcgatatctt cagcatcata tccaaaaggt aaataccatt ttttattctg
    12001 tttattccta tagtagtgtg ttacttttag taactttaaa acaattgaac ttcccatcta
    12061 ttttcatcct tctataattg taataacgct ataggtaagc cttcttcggg ttcatcgcta
    12121 ttaaatctaa acccccacgc aaaaatacct tttaatcttt ctactttaaa atattgatta
    12181 ctgccatcag tcagtttata aattttacca atttctatct tttttctgtc tactaagtaa
    12241 ctttcggcaa caattacttt actttgataa acgtcatatt catttaaaat accgttcatc
    12301 tcagattttc tcattttctc tttataaagt tgtatttcgt gtcttaattc tggctcagac
    12361 atctcactca atttcttctg ttccatcggc aataccactt tcttctaatt tagctttaat
    12421 tttatcatat ttatatcctt ttctcataag gccttcgata gtttttgaaa ttaatttctg
    12481 ttgcgtgtac ttctttcgat ttttattata aattttttct aaatctcgtt gtaataaatc
    12541 gtctaaaacc gcttcatctt gtgtaaaatc catttcattc aatacagcat gaatggtttc
    12601 catttcaaac cctttttgaa ttaaagattg cattactttt tctttaacct tattttgtgg
    12661 cccttttttt gttttagata ttttttcagc aatttggata atatcatcaa gttcctgttg
    12721 ttctctataa agttctgtaa acatttcaat gatatttggt tctataccaa gttgatatag
    12781 tttttgttga taaattttag gtcctttatc tgtcgtgcga atcattgtat tttttaaact
    12841 ttccgcataa tcttgatggt cgattaactt ttcgcgataa caatattcaa tcacttcaga
    12901 aatcgcttgc tctgatatct cttctttttg taaatattgt ataacttctt tttcagttct
    12961 ctttttatat gataaatatt ggattgcttt gtttaaacct atgcgataat gatcatactt
    13021 ttgaatctct gccatgtcag cagcttcaag ttgttgccct ttttttaaat taaatttgac
    13081 taatgtatcg atatctatac ccatttcaaa ttgttcgtct aaaaaaagat taaaacgttc
    13141 tttgtttttc ttttgaactt ctattttagt aatcttcggc actggatcac cccgttactt
    13201 tctcaagttt taatacaata ctcttttatt attcaataag ccacttccta tagcaaatgt
    13261 ttaactttaa atatttttcg atgctaacaa aaaatcacac tatcatcttt taaaatgaaa
    13321 gtgtgattac aagcaaatct gtaaaattta taaagcagaa acaattcaac tttatcatta
    13381 tgacatttca attaaacctt ctacattata gttccaagca tcttacacat gaatgcaagt
    13441 atttaacgat ttaattgtga catagcctgt tgatattgtg tttcattgat ataattttgt
    13501 tgcttcattt tttctaagtt cgtgcttaca cgttgcgtaa aattctctga catattattg
    13561 atattatata cgctaggtgc attgacttta ctagctaaaa tagcgctttg taaaactgtt
    13621 atgtgagaca ttgttgtact atttttattc acggttgttc caaagtaatg gtttgctgcg
    13681 ccctcaagcg tatattgatt atccccaaag taaatattat ttaaataaaa gcttaaaatt
    13741 tcgttcttat tacattgttt ttcaactcga tgagctacaa ataattcttt tacttttcta
    13801 gtaaatgaac gatcattatc ataaaaataa tttttgacaa cttgttgtgt aatggtacta
    13861 ccaccttgca catctctgtc gctaatcgtt gaaaataaag ctctagttgt acctttcaaa
    13921 tcgaatccat gatgattgta gaatcgttca tcttccattg aaataaaggc acctttaaca
    13981 tactctggca tgttatcagc tgacacaaaa ctacttttat tttcaatttt tcttagttca
    14041 tccacattat cgcgtgtaga taaaaaatac atgataccaa taaacaatgc gataatgatt
    14101 agaatggtta ataatatttt caatagtatt cgtttacttt ttttcttttt cggcggtttg
    14161 ccaactggtt gataatacgt attatagtga ggttcgtgtt tcatatgctc aaaatgttca
    14221 tttgagtttg agtacctatc gcttcttttc atgcgtttgc tccttctttt aaaactcact
    14281 tagtatatac cttgagttta ccagtactat cacaaatagg ctacactttt tgggaaaatc
    14341 agtccaaggg cttacaatcg tatacgccat catacttact tttttgtttt ttgaaaaaat
    14401 tatagataaa tcattgcaat tttaaatatt aatcatgtca aatattgtta tattttgtaa
    14461 aaataaaaga ccatccctat taaatgccaa tagagacgac cttttatttg ttattcattt
    14521 attaaaacta aaatccatat ttcatttcaa acgaaaatat ataaatttta acaatcgata
    14581 accacaatac ttctattgta attgtttaac gatttctcga ttaaaatcat ctaaatcgtc
    14641 tggtactcga cttgttacaa tattgttgtc tacaactact gactcatcaa ctacatgtgc
    14701 gcctgcattt gataaatctt tgcgtacatt taatactgct gttaacgtac gaccttttaa
    14761 atcgtctgta tctattagta tttgtggccc atgacaaatg gcaaatgttg gtacatcatt
    14821 tttagtaaag tatttagcaa atgtgccata tcgaccttct gtatctccac gtaaatgatc
    14881 tggtgaaaat cctccaggaa ttaataatgc atcataatct tctggtttag cttctgcaat
    14941 gcctacatcg acagtaactt tttcaccgtg tttaccaaca acttcactat ttgcagtatc
    15001 tccaatcact acagtattaa agcctgcatt ctctaatgcc tctttagggc ttgaatattc
    15061 tatatcttca aattcgtttg ctagaataat tgctactttt ttagtcattg aaaatcacct
    15121 ttctatatat cattgatata attactatag acaagtaaat cagtgattaa acatacaaga
    15181 tataaaaatt attaagcgac tgtcgcgata tctaacccta acacatctta tgtggcattt
    15241 acttagatac taatttaacc ttttcttcaa gctgatctaa caatccaatc cattcatcta
    15301 tatcttcaac acgtacttca tcaggattta catgatcgat atcctcaata aacttattta
    15361 aacgcgcttt tatctgttcg attgtttgct gttcattcat aaaaagttaa ctccttttat
    15421 tttgttttct ttttcattat tatcctaaca gaaattgcgt taaagcgata taatcttagc
    15481 tatatttatg acattcaaat tattttgact tttaaaaatc cccttttcaa ttaactaaaa
    15541 ttaagagata atttgttacg agtgataata cgaagtggta tcataccgat atgaaccaaa
    15601 tagaaagaag gaagtttaag acgatgaata gcgtcaaatt gaagcaacct gttagcattt
    15661 acaatgatcc atgggaatca tataacgatg ttaaagaaca tagccaatta actttaagta
    15721 acatcgaatt tacaactaca aatctttgta atatgcgttg tagccactgt gcagttggtt
    15781 atactttaca aactgtcgac cccgagcctt tagatatgga cttaatttat cgtagacttg
    15841 atgaaattcc aaatctgcga acgatgtcaa ttacaggtgg cgaaccaatg ttttctaaaa
    15901 agtctattag aaatgttgtt aaacctctat taaagtatgc acatcatcga ggtatatata
    15961 cacaaatgaa ttcaaaccta acattgcctc aagatcgtta tttagatatt gctgaatata
    16021 tcgatgttat gcatatctca cataactggg gaacaactga tgaattcgca aatgttggct
    16081 ttggcgcaat gaagaagcaa ccaccgttaa aagctaagtt aaaattatat gaacaaatga
    16141 tttcgaatgc acgtacatta tcagaacaag gaatgtttgt atctgcggaa acaatgctca
    16201 atcaaagtac gctaccacat ttacgaaaaa tacatcaaga agtcgttcat gatatgaaat
    16261 gtagcagaca cgagattcac cctatgtatc cagctgactt tgcaagtcaa ttaaatgtgt
    16321 taactctagc ggaaatgaaa aagacaattc atgatatatt ggatttcaga gatgaagata
    16381 tttggatgtt atttggtact ttgcctgtgt ttccatgctt aaaggatgat gaagatcaaa
    16441 agttactatc acgtttaaga aatgctaaaa atgtaacgac tagaaatgac ccggatggcc
    16501 gtagtcgttt aaatgtcaat gtatttacag gtaatgtaat cgtaactgat ttcggagatg
    16561 aaacaggtac aatttcgaat atacaaaaag ataaattaac agatgtattt gataaatggt
    16621 tatcctctga tcttgctaaa tcattaaatt gtcattgttc cgagtttagt tgtttaggac
    16681 caaatgttct tgttaaaaat atgtactatc cgaatatgga ttttaaagat aatgagcgtc
    16741 atatgcacaa acaaccacaa attatacaat tttaaaaacg cttaattatg cggagaagca
    16801 ctttatcgat aagtagtctc cgcatatttt aatgctatta taaaataaaa aacaattaat
    16861 tgctggcagt actctacttt aataataaag gtcatttaat aggactaata gtctataata
    16921 aaaggggtaa attttaacta aaagcataaa cgtgcataat caaaaagaca gattgtaggt
    16981 ggaatattcg aacataacag ttcaattcat ccttaacaat ctgtctttat atttttagtc
    17041 tctaatatgt tgcacttgag ctaaatattc aattgtttgt ttactttcaa tgcgacgtgc
    17101 ttttcttcgt tcaacacgtt gtggtgctgt atcataaaac catttttcaa catcatcttc
    17161 tggatataca ccaggtacat gtttaggttt gccttcatca tctaacgcaa caaatgttaa
    17221 gtaacttaat gcagctaaat catgcttgtt attaaataca tcgtcaattc taatttgaac
    17281 gaccacttcc attgaactag tcccagcgta tgaaaccatc gctacgtatt gtaatatgtc
    17341 ccctgtttta atcggcttta agaaatctac tgagtctgta gatgcggtaa ctacttgcgc
    17401 accagcatgt ttcatagctg tgattgctgc aatttcatca atattagcca tcaatgtacc
    17461 accaaacatt gtatgatggt gattcgtatc ttgagggaaa acttgtctat ttttataaca
    17521 ttttgattct gacatagatt tcattggtct gtcctgattt gtcattattt tatctcccaa
    17581 tctatacttt aatcacgtat ttgaccttta aatacatgtt tcatttccta ctcagcacct
    17641 caaaataaca tttattaaaa tgttgatgcc caatttccat tttcaaatac tagttctttt
    17701 gaaccatctt cgaatatgcc ataaatagtc aaatcactac taccaatcat gaaatcgaca
    17761 tgtacatttg aatcatttaa tccgcttgca atcttttcct caacagtcat ttccgttcca
    17821 ccttgaatat taaaggcgta agcagatcca atcgctaaat gacatgctgc attttcatca
    17881 aataaagtat tgtaaaaaat ggtattacga tttgatatcg gtgaatcatc aggtactaat
    17941 gctacttcac ctaatcttct tgaaccttca tcagtattga ttaaatcttt caataccgtt
    18001 tcaccttttt cagctgaaaa atcaataatc tctccatctt taaacatcaa tttaaattga
    18061 tcgataattg tgccattata acttaaaggc aatttattag taacatatcc atctactcta
    18121 tttcgatctg gtgctgtaaa tacttcttca gttggtatat tagcaataaa agcttgttcc
    18181 ttgccgttaa cataacttgt agcatcttcc cagatatgat ttttcgctaa acctaccgtt
    18241 aaatcagtac cttcagatac ataatgcaac gcatggtaat ttttttgttg taacttttga
    18301 gcgtaaacac ttaaattagc gatgtgttga cgccaatttt caactggatc gttaccatca
    18361 attcgcacaa tatcgaatac ctcgtcaata aacttaatat atgcttcttc tacagatagt
    18421 tcaggataca ctctcttcgc ccaagcttta gatggaaaag cagctacgac ccatggaaat
    18481 tgattttttt gtacactttc catatatcct ttaaatgcgc gtgcgttttg ttgttgaaat
    18541 gcttgtaatt tttggctatc gataccatcc attaaatcag gatcttcact aataagtgct
    18601 aaattagcag cgccacgttt aacgtaatcc attctcgctt caacatcata tgattttaac
    18661 tcatgattag caaaatgttc cacagattca ttttcaaatt ttaagcgttt taaggttgga
    18721 tcgctatata caacacgtac atctgaagcg ccacaatgat atgcttcttc tacaattaaa
    18781 tgcgttaatt ctaatgtttc tactgatgat ctaataaata ctggctgttt tggttgaaca
    18841 ttcataccaa ccttaactaa tagttcagcg tattgttgta acttttcttt gtaattagtc
    18901 aaaattccca ctcctagtcg tgtcgcaatt gtcctaaagc gtcagcaata gctgtcactt
    18961 cacttggcga caatctttct cttgattgaa caaaatcata tatatctgtt aattcttctt
    19021 catttgcatt tttatatttt tcaggatcta ataatccttg attaacaata tttaacttct
    19081 ctctaatagc taatactttc tcttcatttg tcatagccac aatgttcacc tctaataata
    19141 gttatgttat caaagtatca caatttaata aactttaata gaattttata taatctgctt
    19201 tcttattgtt taaagtcgct ataaaatggg gatataacta catagtttgg aggaatcaaa
    19261 atggtagatg tagcatttgt ctgtcttggc aatatatgtc gttctccaat ggcagaagca
    19321 atcatgcgac aaagacttaa agacagaaat attcatgata ttaaagtaca ttcaagaggt
    19381 actggtagct ggaatttagg agagccgcct catgaaggta cacaaaaaat tctcaacaaa
    19441 cacaatattc catttgatgg catgattagt gaattattcg aagcgacaga tgattttgat
    19501 tacattgtgg ctatggatca aagtaacgtt gataatatta aatctatcaa tcctaatctt
    19561 aagggacaat tgttcaaact gttagaattt agtaatatgg aagagagtga tgtaccagat
    19621 ccatactaca cgaataattt tgaaggtgta tacgacatgg tattatcatc ttgtgataat
    19681 ttaatagact acatcgtaaa agatgcaaat ttgaaagagg ggtagttttt tatggaaaat
    19741 aaatttgttc ctggtatttt aattggtgcc gtaattggtg gtgcaattag tttagctgat
    19801 aaatctacac gtcaagcttt agttcaatca gttaaagatg caaaaaatgg taaccgcact
    19861 cgtaagcctt ctaaagtcag caagattaaa gacgaagttt tatactggaa agatgttgtt
    19921 gaagaaattc gtcgtaataa tcctgaatta gaacgttcat taaaggatgc gaaagaaaca
    19981 tttgttaata gaaaaaatca acgctaagat gattttgttt ttataaggta atacttaaca
    20041 a
//
LOCUS       DAKPJH010000046        19954 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.046, whole genome shotgun sequence.
ACCESSION   DAKPJH010000046 DAKPJH010000000
VERSION     DAKPJH010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19954
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.046"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            6..407
                     /gene="msa"
                     /locus_tag="OY092_001364"
     CDS             6..407
                     /gene="msa"
                     /locus_tag="OY092_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000876216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarA expression modulator protein Msa"
                     /protein_id="HCX1076314.1"
                     /translation="MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGI
                     LFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKFNNYIKTEMMELEHIDVLITSKD
                     FGFDEILFYTLYLLLILIVLYYLKKQVKNKN"
     gene            complement(648..1913)
                     /gene="lysA"
                     /locus_tag="OY092_001365"
     CDS             complement(648..1913)
                     /gene="lysA"
                     /locus_tag="OY092_001365"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HCX1076315.1"
                     /translation="MTVKYNQNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRY
                     HRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSEGELYTALEAGFEPNRIH
                     FHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQVVLRVNPGVEAHTHEF
                     IQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIV
                     LRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEI
                     GIEPGRSIVGEAGVTLYEVGTIKEIPGINKYVSIDGGMSDHIRTALYDAKYQALLVNR
                     NEKADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQK
                     PSVFFLKDGKAREVIKRQSLRQLIINDIK"
     gene            complement(1903..2988)
                     /locus_tag="OY092_001366"
     CDS             complement(1903..2988)
                     /locus_tag="OY092_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCX1076316.1"
                     /translation="MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQ
                     FIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYK
                     HKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADE
                     FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIAL
                     YGSRPYSSLNQHDIVQSLTVKAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGY
                     GDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTF
                     KGVGANSEQLSAMNHDSLKKEYISNDC"
     gene            complement(2993..4144)
                     /locus_tag="OY092_001367"
     CDS             complement(2993..4144)
                     /locus_tag="OY092_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCX1076317.1"
                     /translation="MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDC
                     PLETGVIAYLEGNGSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALM
                     LFVQRCKDMQDASQLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPF
                     ADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFH
                     LNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLL
                     FNVDCEVKFAEGYPPTINSPKLRTQIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLA
                     PAYFVFIGTRNEDKGFVTGLHTSHLNFDEKVLINVVNFYENLLNNYKEV"
     gene            complement(4287..5006)
                     /gene="dapD"
                     /locus_tag="OY092_001368"
     CDS             complement(4287..5006)
                     /gene="dapD"
                     /locus_tag="OY092_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HCX1076318.1"
                     /translation="MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFG
                     SEQSKVIFCEADDWKPFYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIR
                     EQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIE
                     PPSASPVIIEDDVLIGANAVILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIK
                     QASEVQDTKKEIVAALRKLND"
     gene            complement(5033..5755)
                     /locus_tag="OY092_001369"
     CDS             complement(5033..5755)
                     /locus_tag="OY092_001369"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HCX1076319.1"
                     /translation="MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQ
                     HIADVKDADVAIDFSNPNLLFPLLDEEFHLPLVVATTGEKEKLLNKLDELSQNMPVFF
                     SANMSYGVYALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKEN
                     VTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFAN
                     GAIQAAERLVNKPNGLYTFDNL"
     gene            complement(5752..6639)
                     /locus_tag="OY092_001370"
     CDS             complement(5752..6639)
                     /locus_tag="OY092_001370"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HCX1076320.1"
                     /translation="MTHLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVN
                     GTTAESPTLTTDEKERILKAVIDLVDKRVPVIAGTGTNDTEKSIQTSIQAKALGADAI
                     MLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVETLSQHPYIV
                     ALKDATNDFEYLEEVKKRIDTNVFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQ
                     ALYDAQQSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLGFGNYELRLPLVSLED
                     TDTKVLREAYDTFKAGENE"
     gene            complement(6641..7630)
                     /locus_tag="OY092_001371"
     CDS             complement(6641..7630)
                     /locus_tag="OY092_001371"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCX1076321.1"
                     /translation="MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEV
                     EFQEKTYTVQELTDARASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAE
                     DIDLIVPEVNEPTFTRGIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGM
                     KGKKDLAEGVNGKAPEAYPHPIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDL
                     KVTATCARVPVQDSHSVEIDVTLDKEATAEDIKALFDQDDRVVLVDNPENNEYPMAIN
                     STNKDEVFVGRIRRDDSLENTFHVWCTSDNLLKGAALNAVQVLEQVMRLKGAN"
     gene            complement(7694..8899)
                     /locus_tag="OY092_001372"
     CDS             complement(7694..8899)
                     /locus_tag="OY092_001372"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HCX1076322.1"
                     /translation="MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAM
                     GNTTDQLMTNVSTLTKAPKQQELALLLTTGEQQTVSYLSMVLNDIGVNAKAMTGYQAG
                     IKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA
                     LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVEL
                     AKNYNIPLYLGKTLSNVKGTWIMSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLL
                     TQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMILETLKNQYEALAYKI
                     NEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAV
                     EKLYDAFNI"
     gene            complement(9759..11360)
                     /locus_tag="OY092_001373"
     CDS             complement(9759..11360)
                     /locus_tag="OY092_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1076323.1"
                     /translation="MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFL
                     KILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEI
                     YMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
                     KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNV
                     CTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANA
                     SKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKV
                     LDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNS
                     EFFEGVNMNLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCM
                     LSKMMLSSANVLLLDEPTNHLDLESITAVNDGLKSFKGSIIFTSYDFEFINTIANRVI
                     DLNKQGGVSKEIPYEEYLQEIGVLK"
     gene            11507..12409
                     /gene="cvfB"
                     /locus_tag="OY092_001374"
     CDS             11507..12409
                     /gene="cvfB"
                     /locus_tag="OY092_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HCX1076324.1"
                     /translation="MALDKDIVGSIEFLEVVGLQGSTYLLKGPNGENVKLNQSEMNDD
                     DELEVGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARIDVGLPREV
                     LVPWEDLPKVKSLWPQLGDHLLVTLRIDRENHMYGRLASESVVENMFTPVHDDNLKNE
                     VIEAKPYRVLRIGSFLLSESGYKIFVHESERKAEPRLGESVQVRIIGHNDKGELNGSF
                     LPLAHERLDDDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKQ
                     KIINIETGKITLTKKGWSRIDSKE"
     gene            12722..13705
                     /locus_tag="OY092_001375"
     CDS             12722..13705
                     /locus_tag="OY092_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HCX1076325.1"
                     /translation="MKKWQFVGTTALGATLLLGACGGGNGGSGNSDLKGEAKGDGSST
                     VAPIVEKLNEKWAQDHSDAKISAGQAGTGAGFQKFIAGDIDFADASRPIKDEEKQKLQ
                     DKNIKYKEFKIAQDGVTVAVNKENDFVDELDKQQLKAIYSGKAKTWKDVNSKWPDKKI
                     NAVSPNSSHGTYDFFENEVMNKEDIKAEKNADTNAIVSSVTKNKEGIGYFGYNFYVQN
                     KDKLKEVKIKDENGKATEPTKKTIQDNSYALSRPLFIYVNEKALKDNKVMSEFIKFVL
                     EDKGKAAEEAGYVAAPEKTYKSQLDDLKAFIDKNQKSDDKKSDDKKSEDKK"
     gene            13896..14822
                     /gene="pstC"
                     /locus_tag="OY092_001376"
     CDS             13896..14822
                     /gene="pstC"
                     /locus_tag="OY092_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HCX1076326.1"
                     /translation="MTSSTNVKALIEKNNNKKGKHNDKIIPVILAAISAISILTTLGI
                     LITLLLETITFFTRIPITEFLFSTTWNPTGSDPKFGIWALIIGTLKITVIATIFAVPV
                     GLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFN
                     AISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVLPAATSGI
                     VASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATFGSNIY
                     YSIYAVGFTLFIFTLIMNLLSQWISKRFREEY"
     gene            14824..15741
                     /gene="pstA"
                     /locus_tag="OY092_001377"
     CDS             14824..15741
                     /gene="pstA"
                     /locus_tag="OY092_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HCX1076327.1"
                     /translation="MEMTDNNRQSLVDQQLVQKHLSSRTVKNKVFKLIFLACTLLGLV
                     VLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILGI
                     GTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSIL
                     AAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILT
                     GFILSLSRALGETAPLVLIGIPTILLATPRSILDQFSALPIQIFTWAKMPQEEFQNVA
                     SAGIIVLLVILILMNGVAIILRNKFSKKF"
     gene            15788..16639
                     /locus_tag="OY092_001378"
     CDS             15788..16639
                     /locus_tag="OY092_001378"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HCX1076328.1"
                     /translation="MAQTLAQTKQISQSHTFDVSQSHHKTPDDTNSHSVIYSTQNLDL
                     WYGENHALQNINLDIYENEITAIIGPSGCGKSTYIKTLNRMVELVPTVKTAGKILYRD
                     QDIFDQKYSKEQLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKNKKVLDEIVEKSL
                     RGAAIWDELKDRLHTNAYSLSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRV
                     EELVQELKEKYTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTED
                     YISGRFG"
     gene            16646..17287
                     /gene="phoU"
                     /locus_tag="OY092_001379"
     CDS             16646..17287
                     /gene="phoU"
                     /locus_tag="OY092_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HCX1076329.1"
                     /translation="MAIIRQRYQEQLDDLIKELRRLGANVYVSIENGIKSLSIDDRGF
                     ARQTVKNDKHINQLNYNINERVIMLITKQQPIASDLRMMISSLKIASDLERIGDNASS
                     IANIRLRTKITDDYVLTRLKTMGKLAMLMLKDLDQAFKKKDTVLIREIIERDEDIDDL
                     YSHIINATYLIDNDPFVAAQAHLAARHLERIGDHIINIAESVYFYLTGTHYEQ"
     gene            complement(17430..19244)
                     /gene="pepF"
                     /locus_tag="OY092_001380"
     CDS             complement(17430..19244)
                     /gene="pepF"
                     /locus_tag="OY092_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HCX1076330.1"
                     /translation="MSQGLLLREDVPVSETWDLVDLFKDDQQYYESIDALVQQANQFH
                     HTYATTLNSIEQINTALAELENILIALDRLSNYAELRLSVDTSNIEAQVLSAKLSTTY
                     GKIVSQLSFVESEILELPEEILQQLEESCPYQHYIKQLIKQKPFQLSASVEQVLATLS
                     PTLNSPYDLYGTTKMLDITFDSFEHDGTTYPVDYATFENDYEDNKDPEFRRKSFKSFS
                     DGIRKYQHTTAATYNMQVQQEKIEADLRGFESVIDYLLHSQEVTRDMFDRQIDMIMRD
                     LAPVMQKYAKLLQRIHELDNMRFEDLKISVDPDYEPEISIEDSKNYIFGALSVLGDDY
                     TNMLREAYDQRWIDFAQNKGKDTGAFCASPYFTHSYVFISWTGKMAEAFVLAHELGHA
                     GHFTSAQKHQPYLESEASMYFVEAPSTMNEMLMANYLFNTSDNPRFKRWVIGSILSRT
                     YYHNMVTHLLEAAYQREVYHKVDQGESLNAPTLNEIMLNVYKQFFGDVVDMTEGAELT
                     WMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKNEGQQAVDAWLETLKKGGSVSPVELAN
                     IAGVDITTEQPLKSTIQYISDLVDEVEKLTDEIEQANN"
     gene            19449..19793
                     /locus_tag="OY092_001381"
     CDS             19449..19793
                     /locus_tag="OY092_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076331.1"
                     /translation="MTLFDMPNYLWITTLIMILLTIFCCLVLNKWFVSAVITFVILGV
                     LAFFIPNFQDIKYQPLLGYAAFLAIMSLLISFLLWYFTRNWRKERKARKLEKQIEKYG
                     YEGAELRRKDKK"
     gene            19741..19926
                     /locus_tag="OY092_001382"
     CDS             19741..19926
                     /locus_tag="OY092_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076332.1"
                     /translation="MKNTAMRALNFAVKIKNNIRQLYAQNHRLLSYTAVTIISKEMEY
                     SAIVVFVLTFLYFTWLT"
BASE COUNT         6518 a         3407 c         3205 g         6824 t
ORIGIN      
        1 attttatgaa atatcttatc cttagtttag ttgctaattt attagttttc ggtgtattat
       61 ctgcaattgg tttaaatatt aatattttag cagcaatgat gattgtatta gtgattccga
      121 taatgatttc tgggatatta tttttcaaaa ctaatattga taaaacatac atatttttca
      181 acatcatatt catagacttt tattattata tttacaatgt acatttaatg actttgccaa
      241 agtttaataa ttatatcaaa acagagatga tggaattaga acatattgat gtattaatta
      301 caagtaaaga ttttggattt gatgaaattc tgttttatac attatatttg ttgttaattc
      361 ttatcgtttt atattatttg aaaaagcaag taaagaataa aaactaattt catgatgctt
      421 gtttaaagtg tggtatgtaa atgatgcttt aaattagttg aatagggcta actaaatata
      481 aaggattaat gacaaaaaga aataaatact ttctaactaa aaaagtgctg ttcttccttt
      541 tttagagtat atgtccaagc atgttatcta cagtcatcct ataatgcata aaaattcccc
      601 gagtcacagt ataattttct gtgcttcggg gattactttg tttattttta ttttatatca
      661 ttaataatga gttgtcttaa cgattgtcgc tttataactt cacgtgcttt gccatctttt
      721 aagaaaaaca cagaaggctt ttgcatttga ttgtaattgg atgccataga gtaatgatat
      781 gcaccagttg ataatatagc aagatagtct ccacgtttga ctgatgaagg taatttagcg
      841 tctttaataa tgatatcacc agactcgcat aattttccag ctatagttac actgtcatct
      901 gctttttcat ttctattaac aagcaatgct tgatactttg cgtcataaag tgcagttctg
      961 atatgatcac tcataccgcc atcgatagaa acatatttat taatccctgg aatttcttta
     1021 atggttccaa cttcatataa agtaacgcca gcttcaccta caatagatcg tcctggttca
     1081 atacctattt ctggtgcatc tatacctaga actttaattt cggattttat tgcgtctgta
     1141 atatctttaa taccactttc gatagggaaa ctttcatcac cttcaacata tttaatacca
     1201 aagccaccac caaggtttaa taattcaact tgaatgcctt gctctttaag ccaacgtaaa
     1261 acaattttag cagtttcaat aaatgcttct gtaccttcaa tctgtgaacc aatatgacaa
     1321 tgtacacctt ttaattttaa gtgtttagat tgttggactt tgtcaattgc ttttttagct
     1381 aagccatatt gaattgataa cccaaactta ctatcttctt gaccagtttg aataaattcg
     1441 tgtgtatgtg cttcaacacc tggattaact cgtaatacaa cttgaaccgt atcattagca
     1501 tagcggtcta ttaattcaat ttcttctaat gaatctataa caaaataacc gatgttattt
     1561 tctaaagcat acctaatttc atgtttcgtt ttattgttac catggaaatg gatgcgattc
     1621 ggttcaaaac ctgcttctaa agctgtatat aattcacctt cagaaacaac atctaactgt
     1681 aaatcttcct cagctacaag tttgaccatt tgaatgcaag taaatgcctt tgaggcgtat
     1741 gaaatattgt attttaatcc actatcttta aatgcgcgat ggtaacggcg catctgttct
     1801 ctaatttgta gttcatcata aacaatggta ggtgtaccaa agctttgcgc aatcgttttt
     1861 aaactaatac catccattgt taattcgcca ttttgattat atttaacagt catttgaaat
     1921 gtactccttt tttaaagaat catgattcat agcacttaat tgttcagaat ttgcaccaac
     1981 acctttaaag gtatattcat cgatgcggat atcattatta taaagaataa cttcatcttg
     2041 tgcatgtaca ttgccatcta cttcaacaaa catatggctc atcattaatg cacgtatcgg
     2101 gtagcgttta ccattgataa gtgcttcatg tttagcacga gttcttaaaa ttccatcgcc
     2161 ataaccgata tcaactacag ctaattttgt attgttttta gtcacttcaa aggcaaagct
     2221 ataaccgcaa taatcaccag cttgtacttc gcgcacttga ataacatgtg cttttacagt
     2281 taatgactga actatatcat gttgattcag tgaactatat ggtcttgaac cgtataacgc
     2341 aatacctaca cgcgcatgtg tatggtgggg tagtaatatt tgtccttccc gataaaaact
     2401 cgcactattt tgagcatgga ttaggtcgaa ctgataacct tcagataaaa gtgcttcaac
     2461 aatttccatc cattgtgaac gttcaacatt ataatctgac acatcgaatt catcagcata
     2521 tccaaaatgg gtccataaac cactaataat catttttgcg ttttgattat gatggtgatc
     2581 tttcaatact tctttaattt cgtttaaatc tttaaatcca gaccgatgta ataaattttc
     2641 aaattctaag tgaacatgaa tacctgctaa atcattttta tgcttatagt aatatgtcaa
     2701 cgacggcaaa gtcatgtgta tttgatgttc acggactaaa tcaaactcgt aaactgcatt
     2761 cattaaaaag attgttgcat ctggagcaag ttgtctaatt tgaattgctt ctcgtagtga
     2821 tgttgtgcta aatgtatcta tacctgcatg gataaactga gttacagcaa attctaggtc
     2881 atagtgatat gcattatttt taacaactgc cattaatggc tgattgtttt tgactgtgat
     2941 tgcattttgt aaaaatattt tcttatttac agaccatgtt gctgtcaatg tattacacct
     3001 ctttgtaatt atttaataaa ttttcgtaaa aattaaccac gtttattaac actttttcat
     3061 caaaatttaa atgtgatgtg tgcaaaccag ttacaaaacc tttatcttca tttcgtgttc
     3121 ctataaaaac aaagtaagct ggagctagtt gttgaccata aaaactaaaa tcttccccaa
     3181 ataagaatgg cgttggtttg tcatagacat ttaaatcagc ttttattaag gcgtcctcta
     3241 tttgagtacg taatttcgga ctattgattg tagggggata accttctgca aatttaactt
     3301 cacaatctac attaaacaga agcttgacac tttctgctat cttgtgcatt tgatttttaa
     3361 cgattgttaa atcatcaata tcatatgtac gaatagtacc ttctaaataa ccattacttg
     3421 gtacagtgtt aatcgcttca ccagctttaa aatgaccaat atgaacaata tttcgtttca
     3481 aaccgttaag gtgaaattgt tgaatttgtg atatttgagt taatacatgt tgtaatgctt
     3541 caccacaaga atgaccttgt tctttatcag caacatgact tgacaggcct gttaagaaaa
     3601 agcgatactc tgttgcgctg gccgtaattt cttcatctct tatcactgca atgccttcat
     3661 cagcaaatgg gttaacatga ataccaaata ccgcttcaat tggatactta tcaaaggcac
     3721 cggcttttat taatcgattt gcaccgccac cagtttcttc tgcaggttgg aaaatgaaaa
     3781 cgacattttg cggtaattga cttgcatctt gcatgtcttt gcaacgttgt acaaaaagca
     3841 ttaatgcagt tgtatgacca tcatgtccac aagcatgcat cacatgatca gattgactgc
     3901 gataaggcac atcattttcc tctaaaatag gtaacgcatc aatatcagct ctatacgcta
     3961 tcgtatgtga gccattacct tctaagtatg caatgacgcc agtttccaat gggcaatcgt
     4021 atttaatatt taaactatct aaaaacgctt taatataagc agttgtttca aattcatgta
     4081 agcttaattc aggatgttga tgtaaatgac ggcgatgttt cgtaacaaat tctaattcat
     4141 tcataattat caatcctttg tgttaaatta ctatataaat agtgtaacgt atttcgaaat
     4201 ttgtgatcat aagtttattc aatgataaac aataaggttg agacataatc gtatctcaac
     4261 cttgaaatta ttatacgttg acgtcactag tcatttagtt ttcttaatgc tgctacaatt
     4321 tcttttttag tatcttgtac ttcagaagct tgcttaatca cttttgcagg tgtaccagca
     4381 acaactgcac cagctggtac atcttgtgtc acaatcgcac cagctgcaac aatagcacct
     4441 ttaccaacac gtacaccttc taaaataact gcatttgcac cgattaaaac atcatcctcg
     4501 attataactg gtgaagcact agggggttca atcacacctg ctaatactgc gccagcccct
     4561 acatgtacat ttttaccagt tgtagcacga ccaccgagag tagcattcat atcaatcatt
     4621 gtaccttcgc caacgactgc gccaatatta attgttgcgc ccatcataac gacagcacca
     4681 tcttcaataa tggcttgttc tctaataaac gcacctggtt caattcgtgc attcgtattt
     4741 gttaagtctt ttaatggaat ggcagaattg cgacgatcca tttcaatttc tatatcttcg
     4801 aattgactac catatgcttc gtaaaaaggt ttccaatcat ctgcttcaca aaagattact
     4861 tttgattgtt ctgaaccaaa tactttaaaa ctttctggat atgtgatgcc ttcaaaattc
     4921 ccatttaaat atactttaat tggtgtagat tttttagcat cacttatata ttgaataatt
     4981 tcttcagctg ttaaatgttg taccataaaa taatcgatct cctttaatat gtttataggt
     5041 tgtcaaacgt atataagccg tttggtttat taactaagcg ttctgctgct tgtattgcac
     5101 cattcgcaaa aatatctttt gattgtgcac gatgcgtgat ttgaatcgtt tcatcagtgc
     5161 cggcaaatag aacttcatgt tcaccgacaa tcgtacctcc acgaatagaa tgtataccaa
     5221 tatcttgtgg ctggcgtttt tcatttaatt catgtctatc atacacaggt gttacatttt
     5281 ctttcaaaga tacaatcacg tcatataatt tttctaacgt accacttggt gcatctactt
     5341 ttttattatg atgtgcctca gtcaattcga tatcgaaatc atcaagtagg ggaacagcag
     5401 ctgctaaaat tttagtcaat gcataaacgc cataactcat gttcgcgctg aaaaatacag
     5461 gcatattttg actcaattca tctaacttat taagtagttt ttctttctcg ccagttgttg
     5521 ctaccactaa tggcaaatga aactcttcat ctaataatgg gaataataga ttcggatttg
     5581 aaaaatctat tgcaacatcg gcatctttaa catctgcaat atgttgatat tgttgatatg
     5641 gcgttgttgc tttcggtgta ttttcaatga ccccaacaat ttcatggcct ttttcttctg
     5701 ctaatctagc aacgcgttga ttcattgcgc catagccaat tagtaatatc ttcactcatt
     5761 ttcacccgcc ttaaatgtgt catatgcttc acgaagcact ttagtatctg tatcttctag
     5821 gctaaccaat ggtaaacgta attcatagtt tccaaatcct aaataacttg ttaaagcttt
     5881 aataggaatt gggttaatat caactgatag ggctgataac agtgtgccga ttggtttaaa
     5941 ttgatcttga atatctaatc cgctttgttg agcatcgtat aacgcttgaa attctttagg
     6001 aatgacatta gcaatgacag aaataacgcc ttgaccacca cgttgatagt attctacaac
     6061 attgtcatca ttgccactat ataaagcaaa tacattggta tcaatgcgct ttttcacttc
     6121 ttctaaatac tcaaaatcat tcgtagcatc ttttaaagca actatataag gatgttgact
     6181 taatgtttcg actgtttctg gttcaatcgt catatttgtt cttgatggca cattgtacag
     6241 cacgactggt aatttcacag catctgcaat cgcttcaaag tgtttgacta aaccacgttg
     6301 gttcgttttg ttgtagtagg gcgtaattaa cataattgca tcagcaccta aggctttagc
     6361 ttggattgaa gtttggattg acttttcagt atcattagtg ccagttcctg ctatgacagg
     6421 aacacgttta tctacaagat caataactgc ttttagaatg cgttcttttt catctgttgt
     6481 taaagtaggg ctctcagcag tagttccatt aacgatgatt gcttgggcat tattttctag
     6541 taaaaaatta acgtgtgctt tcaaagcttc aagattaact ttgttatttg taaaaggggt
     6601 tgtaagtgca acgccaacac cctcaaataa atgtgtcatt ttaattcgct ccttttaaac
     6661 gcataacttg ttccaatact tgtacagcat ttaatgcagc accttttaat aaattgtctg
     6721 atgtacacca tacatggaaa gtattttcta atgaatcatc tctacgtata cggccaacaa
     6781 acacttcatc tttattagta gaattgattg ccattggata ttcattgttc tctggattgt
     6841 ctactaaaac aacgcggtca tcttgatcaa ataatgcttt aatatcttct gcagtcgctt
     6901 ctttgtcaag cgttacatca atttcaacac tatgactatc ttgaacaggc acacgtgcgc
     6961 atgttgctgt tacttttaag tctggcgcat ttaaaatttt tctcgtctca tcaatcattt
     7021 tttgttcttc ttttgtatat ccattttcta aaaacacatc aatatgcggt aacacattat
     7081 tataaattgg atgtggatat gcttctggtg ctttaccatt tacaccttca gctaaatctt
     7141 tcttaccttt catccctgaa cctgatacag cttgatatgt tgtatatgcc actcgtttta
     7201 aaccataagc atcttgcaat acttttaatg gcacaacaga ttgaatcgta gagcagtttg
     7261 gattggcaat gatacctctt gtaaatgtag gttcattgac ttccggaacg attaaatcaa
     7321 tatcttctgc catacgccat tgacttgaat tgtctataac gattgcacca gctttttcaa
     7381 agagtggggc aaagtgttcg cttgtaccgc caccagcact cattaataca taatcgaaat
     7441 gttcacttgc acgagcatca gttaattctt gtactgtata tgttttttct tgaaattcaa
     7501 cttcttgccc tgcagaacgt gctgatgaaa ataatactaa ttcatcgaaa ggaatatttt
     7561 tacgatttaa tgtctccaac atttttgtac ctactaatcc tgttgcaccc acaactgcta
     7621 actttgtcat aacttgtcac tccattttat aataatttcc aatttttaga atattttaac
     7681 aatcatttta ccattaaatg ttaaatgcgt catatagttt ttctaccgct tgttgcccat
     7741 taaaatcatc aatgacgtat gaaatactta tttcagatgt tgttgtttgg tagaaaggta
     7801 tattattttc aattaatgtc aaaaatgctt ttgatgccac acctgacata tcacgcatgc
     7861 ctgagccaat taatgaaatt ttgacataat gctcattgat tttataagct aatgcttcat
     7921 attgattctt taatgtttca agaatcatag aaatttgatg aaaatcacta tctttaatcg
     7981 tgaaggatag ttgtagccca tccaagttga cgatttgtga aatcatatca acatttacag
     8041 caccttcttc aagttccgta aatagttggg taagtagctg attgtcaggt aggggataac
     8101 taattgttac atgcatcata tgtttatcca aagccacacc agtaactgct tttttctcta
     8161 atatttcttc atttgacata atccatgttc ctttcacgtt cgataaagtt tttcctaaat
     8221 ataaagggat attatagttt ttagctaatt caacacttct tgtttcaagt acaccagcac
     8281 ctaaagcgct catttccatc atttcttcat atgagacgat gtctagtcgt ttagcttttg
     8341 gtaaaagtct tgggtcagtg gcatacacac catcaacgtc ggtataaatt tcacaaggta
     8401 tttgattact aacagcaagt gccacagcgg tcgtatcaga accgcctctg cctaaagttg
     8461 ttaattcctg atgttcattg atgccttgaa atccagcaac tactaaaata tcgttttctt
     8521 gaaaggcttg ttcaaatgtt tgaggattaa tttgagcaat tttacttttt aaatgatggc
     8581 caatggtttt aatacctgct tgatagccag tcattgcttt ggcattcaca ccgatatcat
     8641 ttaataccat tgataaataa gatacagttt gttgctctcc ggttgtcaat aataatgcca
     8701 gttcttgttg ttttggtgct ttagtcaagg tcgatacatt cgtcattaat tgatctgttg
     8761 tgttacccat agcacttaca acgacaatta attgttcatc ttgattgact cgctccttta
     8821 acatttcagc gatccttttt atttttgtaa aatcactgac ggatgatccg ccaaatttca
     8881 acacacttct tgttaccata taatcctcct aattgttagg aagggcacac aataataaaa
     8941 aaagagcaag ttcggaatgc gaacttgctc ttaatctata tacaagtgat gcactccatt
     9001 atttttaaat aatgacaaac tctcagctct taaccaaaaa gtccaacaaa ttataactgc
     9061 tattataatt gcttcggcat cgcacccttt caaatttagc tgttagcaga cagtaatcta
     9121 aactttactc atgattgatg cgcctcatca aaatattatt aaattggtat gtgttcatta
     9181 tacatatgac aaatatgaat gtaaaccgat aatttagatt ttttggaata acctgaaaat
     9241 tcaagttata gcgttgctta tattttaaaa ggtggtgata atgagacttt ttgaaaaata
     9301 aaattcaaaa tacttatagc atactcaata tgcacattaa ataaatgtac tcttttaatg
     9361 cggtgataac tgtatttgta atttagagaa ggggtgttca ctgtgctgat gtgttaaaaa
     9421 ataaaataaa aaggacacct cgatgctata aatattagca tcgagacgcc cagttaatgt
     9481 ctattaaatt gaatatagtc tcggatatga atcaatgccc taggccctgc aatgttatat
     9541 tgacagtagt tgactgaatg aaaatgactt tgtagctagc ttttttcaat ccttgtcggt
     9601 gccacacata gagaaattgg attcctaatt tctacaaaca atacaagttg cggaataagt
     9661 cccaatatag aaggtgacag taagccaact tacaataatg tgcaagttgg tcgggcctca
     9721 acacagagat tttcgaaaag aaattctaca tattatgttt attttaaaac gccgatttct
     9781 tgcaagtatt cttcatatgg aatttctttt gaaacgccgc cttgtttatt taaatcgata
     9841 acacggtttg caatcgtgtt gataaattcg aagtcataag aagtaaagat gatagaacct
     9901 ttaaatgatt taagaccatc attgacagca gtaatacttt ctaagtctaa gtggttagta
     9961 ggttcgtcaa gtaaaagtac attcgcactt gataacatca ttttacttaa catacaacgt
    10021 actttttctc cacctgaaag cacactagct tttttcttaa cttcttcacc actaaataac
    10081 atacgaccta agaaaccacg taaaaatgtt tctgtttgtt catcttcagg agcatattgt
    10141 cttaaccaat caacgagatt catatttaca ccctcaaaga actctgagtt atctttaggg
    10201 aagtaactta atgatgtagt aacaccccat ttaaatgaac cttcgtctgg ttccatttcg
    10261 ccagctaata ttttaagtaa tgttgttttt gcaatttcac tatctccaat taaaatcgct
    10321 ttatcatttg gattcattgt gaatgataca ttatctaata ctttttcgcc gtcaattgtt
    10381 ttagaaagat tttgaacgat taataagtcg ttaccaatct cacgctcagg cgtgaattta
    10441 acgaaaggat atcttcttga tgatggttga atatcatcta attcaatttt ctcaagttgt
    10501 tttttacgac ttgttgcttg tttagattta gaagcgttag ctgagaaacg agcaataaag
    10561 tcttgtaact ctttcatttt ttcttctttt ttcttgtttt gttcttgagc catcttttga
    10621 gctaactgac tagattgata ccaaaaatca tagttaccaa cataaacttt aattttacca
    10681 aagtctaaat cagcgatatg agtacataca ttatttaaga aatggcggtc atgtgatact
    10741 acgataacag tattatcaaa gttaattaag aaatcttcta accaactgat tgctggaata
    10801 tccagaccgt tagtaggctc atccagtaat agtacgtctg gttcaccgaa taaactttgc
    10861 gctaataata ctttaatttt ttggttgttt tctaattcag ccattttttt atcgtgtaaa
    10921 gttggatcga tacctaaacc agataaaagg ttagctgcat cagcctcagc attccaacca
    10981 ttcatttctg caaattcacc ttcaagttca gcagcacgga taccatcttc atcactgaaa
    11041 tctggcttca tatagatttc atctttttct ttcataacct cataaagacg ttcgtgacct
    11101 ttaattacaa catcaagcac acgttcatct tcataagcat agtggtcctg ttttaaaaca
    11161 gctagacgtt catttttacc taatgaaaca tgtcctgttt gagaatctaa ttcaccagat
    11221 aatattttta agaatgttga tttacctgca ccattcgcac caattaatcc ataacaatta
    11281 ccttctgtaa atttaatatt tacatcttca aatagtttac gatctccaaa acgtaaactc
    11341 acatcagtta cttgtaacat gcattttctc ctttttttca ttcgatattc taacggaaga
    11401 attatatcat attatcgtca cagtttcgac ctcatataag ttgtaatgat agaatgactc
    11461 acacatgtta taataataaa gaatacaaga atcgaaggag aataacatgg cattagacaa
    11521 agatatagta ggttctatag aattccttga agtagtaggg ttacaaggtt caacttacct
    11581 tttaaaagga ccaaacggtg aaaacgtaaa gttaaaccaa tcagaaatga acgatgatga
    11641 tgaattagaa gtaggtgaag aatatagttt cttcatttat ccaaaccgtt caggtgaatt
    11701 atttgcaact caaaatatgc ctgatattac gaaagataaa tatgactttg ctaaagtact
    11761 taaaacggat cgcgatgggg cacgtataga tgttggatta ccccgtgaag tgttagtacc
    11821 atgggaagat ttaccaaaag tgaaatcact atggccacaa ctaggtgatc atttgctagt
    11881 cacattacga attgaccgtg agaatcatat gtatggacga ttagcgagtg aatctgttgt
    11941 agaaaatatg tttacacctg tacacgacga taatttaaaa aacgaagtca ttgaagccaa
    12001 accttaccgc gtattacgaa ttggtagctt tttattaagc gaatcaggtt acaaaatttt
    12061 cgtacatgaa tcagaacgta aagctgaacc aagattaggt gaatctgttc aagttagaat
    12121 tatcgggcat aatgataaag gtgagttaaa tggttcattt ttaccacttg cacatgaacg
    12181 tttagacgat gacggccaag tcatctttga tttactagtt gaatatgatg gtgaattacc
    12241 attctgggac aaatcaagcc ctgaagcgat taaagaagta ttcaatatga gtaaaggttc
    12301 attcaaacgt gcaatcggtc acttatataa acagaagatt attaatatag aaacaggcaa
    12361 aatcacttta actaaaaaag gttggagtcg aattgactca aaagaataat catttttaca
    12421 cgtatcgtag gatgcgtgtt ttttatattc aatattaaat cggatagatg aagtagtttt
    12481 ttaatttcat ctgtccattt ttttgtgtac atatttaaat ttcgataatt tttcaggaag
    12541 cattttaatt ttactaatga agcaatattt tttagattaa caaaaattaa tatttacatt
    12601 ttcttaacaa atttttatgt aacatttaca gtttctaaaa atgaggttaa taattcaagg
    12661 ttaagataaa gatgtaatca atacaaatac tatttgttgt tcatacaggg aggatatttc
    12721 aatgaaaaaa tggcaatttg ttggtactac agctttaggt gcaacactat tattaggtgc
    12781 ttgtggtggc ggtaatggtg gcagtggtaa tagtgattta aaaggggaag ctaaaggtga
    12841 tggctcatca acagtagcac caattgtgga gaaattaaat gaaaaatggg ctcaagatca
    12901 ctcggatgct aaaatctcag caggacaagc tggtacaggt gctggtttcc aaaaattcat
    12961 tgcaggagat atcgacttcg ctgatgcttc tagaccaatt aaagatgaag agaagcaaaa
    13021 attacaagat aagaatatta aatacaaaga attcaaaatt gcgcaagatg gtgtaacggt
    13081 tgctgtaaat aaagaaaatg attttgtaga tgaattagac aaacagcaat taaaagcaat
    13141 ttattctgga aaagctaaaa catggaaaga tgttaatagt aaatggccag ataaaaaaat
    13201 aaatgctgta tcaccaaact caagtcatgg tacttatgac ttctttgaaa atgaagtaat
    13261 gaataaagaa gatattaaag cagaaaaaaa tgctgataca aatgctatcg tttcttctgt
    13321 aacgaaaaac aaagagggaa tcggatactt tggatataac ttctacgttc aaaataaaga
    13381 taaattaaaa gaagttaaaa tcaaagatga aaatggtaaa gcaacagagc ctacgaaaaa
    13441 aacaattcaa gataactctt atgcattaag tagaccatta ttcatttatg taaatgaaaa
    13501 agcattaaaa gataataaag taatgtcaga atttatcaaa ttcgtcttag aagataaagg
    13561 taaagcagct gaagaagctg gatatgtagc agcaccagag aaaacataca aatcacaact
    13621 agatgattta aaagcattta ttgataaaaa tcaaaaatct gacgacaaga aatctgatga
    13681 taaaaagtct gaagacaaaa aataataaga cgcaatttca aatgtgtctt gaaacatgat
    13741 tttgatggtg aatcattatt tagagtacaa agcttgattt atcgagacgc tgattttgac
    13801 attcagtaag tctacaagct tatcaactta aaatagtggt tcatcattat tttacaaatc
    13861 taattatttt gggagtaata gaaagaggtt tgattatgac ttcatctact aatgttaaag
    13921 ctttaatcga aaaaaataat aataaaaaag ggaagcataa tgacaaaatt ataccagtta
    13981 ttttagccgc aatttcagcg atttccattt taacaacact aggtatatta atcacattgc
    14041 ttttagaaac catcactttt ttcaccagaa ttccaataac tgaatttcta ttttctacta
    14101 cttggaatcc taccggttca gaccctaagt ttggtatctg ggcattgata atagggactt
    14161 taaaaatcac agttattgcg actatatttg cagttccagt cgggcttggt gcagcaattt
    14221 atttaagtga atatgcaagt gaccgtgcac gacgcataat taaaccgata ttagaaattt
    14281 tagcaggaat accaacaatt gtgtttggtt tctttgcatt aacctttgtt acaccagtat
    14341 taagatcttt cataccaggt cttggagagt ttaatgctat aagtcccggc ttagttgtcg
    14401 gtattatgat tgtccctctc atcacaagtt tgagtgagga tgcaatggca tctgtaccaa
    14461 ataaaattcg agaaggtgcc tatggacttg gagcaactaa attagaagta gcaactaaag
    14521 tcgtacttcc tgcagcaaca tcaggtattg tagcttcaat cgttctcgcg atttcaagag
    14581 caattggaga aacgatgatt gtatcattag cggcaggtag ttcgccaaca gcttcattaa
    14641 gtttaacaag ttcgattcaa acaatgactg gatatattgt tgagatagcg acaggtgatg
    14701 caacatttgg atcaaatatt tattacagta tttatgctgt aggattcaca ttatttatct
    14761 ttaccttaat catgaattta ctttctcaat ggatttctaa gcgttttagg gaggagtatt
    14821 aatatggaaa tgacagataa taatagacaa tcactcgtcg atcaacaact tgtccaaaaa
    14881 catttatcat ccagaacggt taaaaataaa gtgttcaaac tcatattttt agcatgtaca
    14941 ttattaggac ttgtcgtact tattgcgttg ttaactcaaa cattgattaa gggggtaagt
    15001 catttaaatt tacagttttt cactaatttt tcttcttcaa caccatctat ggctggcgtt
    15061 aaaggcgcgt taatcggttc actttggtta atgttaagta tcattccatt atcaatcatc
    15121 ctaggaatag gtacagctat atacttagaa gaatatgcga aaaacaacaa atttactcag
    15181 tttgttaaaa tcagtatttc caatttagct ggtgtaccat cagttgtatt tgggttatta
    15241 ggttacactt tgttcgttgg tggcgcgggg attgaagcct tgaaaatggg taacagtata
    15301 ttggcagcag cgctaacaat gaccttactg atattaccaa ttattattgt ttcaagtcag
    15361 gaagcaatta gagctgtacc taactcagta cgcgaagctt cttacggttt aggtgctaat
    15421 aaatggcaaa cgataagacg tgttgtctta ccagcagcgt tacctggtat tttaactgga
    15481 ttcattttgt ctctttcaag agcactggga gaaacagcgc cacttgtgct tatcggtata
    15541 ccgactatat tattggcaac acctaggagt atattggatc aattttcagc attacctatc
    15601 caaatattta cttgggcgaa aatgcctcaa gaagaattcc agaatgttgc atcggcaggc
    15661 attatcgttt tactagttat cttaatatta atgaatggcg ttgcgattat tttacgtaac
    15721 aaatttagta aaaaattcta atttaaacaa tcaatctcat ttatctatta aaaagggagt
    15781 tttaaacatg gcgcaaacac ttgcacaaac taaacaaata tctcaaagtc atacgtttga
    15841 tgtctcacaa agtcatcata aaacaccaga tgatacaaac tcacattctg ttatatattc
    15901 aacacaaaat ttagacttat ggtatggcga aaatcatgca ttgcaaaata ttaatttaga
    15961 tatttatgaa aatgaaataa ctgccattat aggtccatct ggttgtggca aatcaacata
    16021 tattaaaact ttgaatcgaa tggttgagtt agtacccaca gtcaaaacag ctggtaaaat
    16081 actatatcgc gatcaagaca tatttgatca aaaatattct aaagaacaat tacgtacaaa
    16141 tgtgggcatg gtctttcaac aacctaatcc atttccaaaa tcaatatacg ataatattac
    16201 ttacggtcca aagattcacg gtattaaaaa taaaaaagtt cttgatgaaa tcgttgagaa
    16261 atcattacgt ggcgcggcaa tttgggatga actaaaggat aggttgcaca caaatgcata
    16321 tagtttatcc ggcgggcaac aacagcgtgt ttgtatcgcg cgttgtttag caattgaacc
    16381 tgaagtcatt ttaatggatg aaccgacatc agcattagac ccaatctcaa cattaagagt
    16441 agaagagttg gttcaagaac taaaagaaaa gtatacaatt attatggtta cacataatat
    16501 gcaacaagca gctcgtgtat cagataaaac tgcatttttc ttaaatggtt atgtcaatga
    16561 atatgatgat actgataaaa ttttctctaa cccatcaaac aagaaaacag aagattatat
    16621 ttcaggaagg tttggttgat atataatggc aataattaga caacgatatc aggagcaact
    16681 tgatgattta ataaaagaat tacgtcggtt aggtgcaaat gtctatgtga gtattgaaaa
    16741 tggtataaaa tcattaagta ttgacgatag aggctttgca cgacaaacag ttaaaaacga
    16801 taaacatatc aatcaattaa attataatat taatgagcga gttatcatgt taattacaaa
    16861 gcaacagccc attgcgagtg atttgcgtat gatgatttct tcattaaaaa tcgcctccga
    16921 tttagaaaga ataggagata atgcatcgag tattgccaat attcgattgc gtacgaagat
    16981 tacagatgat tatgtgttaa cccgtttaaa gacaatgggt aaattagcta tgttaatgtt
    17041 aaaggactta gatcaagcat ttaaaaagaa agataccgta ttaataagag aaataattga
    17101 gcgtgatgaa gatatcgatg acttatatag tcatattatt aacgcaacgt atcttattga
    17161 taacgatcca tttgtcgctg cacaagctca tttagcagca agacatttag aacgtattgg
    17221 tgatcatatt attaacatcg ctgaaagtgt ttatttttat ttaacaggta cacattacga
    17281 acaataactt aaagttatta ctataaaatc ccttacgata aatatatatt tctattattc
    17341 ataaaccctc aaaaaaaaaa ccaagattct cacaattagt aatgtgaaaa tcttggttta
    17401 tattgttcta ctataaattg tctcgcatct tagttatttg cttgctcaat ttcatctgtt
    17461 aatttttcaa cttcatcgac taaatcagaa atatattgaa ttgtagattt aagtggctgt
    17521 tctgtagtaa tgtccacacc tgcaatgttt gcaagttcga caggtgatac actaccacct
    17581 tttttcaatg tttctaacca agcatcaaca gcttgttggc cttcattttt aatcttttga
    17641 gaaacgacag ttccgattgt taagccagca gaatacgtat acgaatataa tcccatatag
    17701 taatgaggtt gacgcatcca tgttaattca gcaccctcag tcatgtctac tacatctcca
    17761 aaaaattgtt tataaacatt tagcattatt tcatttaatg tcggcgcatt taaagattca
    17821 ccttgatcta ctttgtgata cacttcacgt tgataagcag cttctaataa atgggtaacc
    17881 atattatgat aatatgttct agataaaatt gagccaataa cccaacgctt aaatcttgga
    17941 ttatcacttg tgttaaataa ataattggcc atcaacattt cattcattgt agaaggggct
    18001 tcaacaaagt acattgatgc ttctgattca agatatggtt gatgtttttg agctgatgta
    18061 aaatgacctg catgacctaa ttcatgtgct aggacaaatg cttcagccat tttaccagtc
    18121 caagaaatga acacatacga atgtgtaaag tatggacttg cacaaaatgc gcctgtatct
    18181 ttacctttat tttgtgcaaa atcaatccat cgctgatcgt atgcttcacg taacatgttt
    18241 gtatagtcat cacctaaaac acttaacgca ccgaaaatat aattttttga gtcttcaatt
    18301 gaaatctctg gttcataatc agggtctaca gaaattttca agtcttcaaa acgcatgtta
    18361 tctaattcgt gaatacgttg taaaagttta gcatatttct gcataactgg tgccaagtca
    18421 cgcataatca tatcgatttg acggtcaaac atatcacgcg ttacttcttg actatgtagt
    18481 aaataatcga tgaccgattc aaatccacgt aaatcagctt caattttttc ttgttgtact
    18541 tgcatattat atgtagccgc ggtagtatgc tgatattttc gaatcccatc gctaaacgat
    18601 ttgaaacttt tacgtctaaa ctcaggatct ttattatctt cataatcatt ttcaaacgta
    18661 gcatagtcga cagggtacgt tgtaccatca tgttcaaatg aatcgaatgt aatatctagc
    18721 atttttgtcg tgccgtataa atcgtaagga ctgtttagcg taggtgataa agttgctaat
    18781 acttgttcta ccgacgcaga taattggaat ggcttttgtt ttattaactg tttaatatag
    18841 tgttgatatg gacatgattc ttctaattgt tgaagtattt cttctggtaa ttcaagtatt
    18901 tctgactcta caaatgataa ttggctaaca attttaccat atgtagtaga taatttagcg
    18961 ctcaatactt gcgcctcaat attactagta tctacactta aacgtagttc tgcataatta
    19021 cttaagcgat ctaaggcaat taaaatattt tctaattcag ctaaagcagt attaatttgt
    19081 tcgattgaat ttaatgttgt tgcatatgta tgatgaaatt gatttgcttg ttgtactaga
    19141 gcgtcaatac tttcataata ttgttgatca tctttaaata agtctactaa atcccatgtt
    19201 tctgaaacag gaacatcttc tcttaaaagt aaaccttgag acatataatc actcctttgg
    19261 tataatacat tcattataca taattttgtc tcctaaacga taatgttacg atttccatgt
    19321 cgcaaggaac aatgattttt ctaatagtag atagaatatt gcttgaaact gactgctatt
    19381 gtttaagttt ttaaaaattt ataataaaat gtatacaagg aaagtaatga aataaaagga
    19441 gaatgaatat gacattattc gatatgccta attatttatg gattacaaca ttaataatga
    19501 ttttattaac aatattctgt tgcttagttt taaataaatg gtttgtatct gcagtaatta
    19561 catttgttat attaggtgtg cttgcatttt ttattccaaa ttttcaagat ataaaatatc
    19621 aaccattatt aggatacgct gcatttttag cgattatgag tttattaatt agttttctat
    19681 tatggtattt tactagaaat tggcgtaaag aaagaaaagc gcgtaaatta gaaaagcaaa
    19741 ttgaaaaata cggctatgag ggcgctgaac ttcgccgtaa agataaaaaa taatattcga
    19801 caactatatg cacaaaatca tcgactttta agttacactg cagtaacaat tatttcgaaa
    19861 gagatggaat acagtgctat agttgttttt gttttgactt ttttatattt tacatggttg
    19921 acttgattca aaatattata ttttataatg attt
//
LOCUS       DAKPJH010000047        19747 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.047, whole genome shotgun sequence.
ACCESSION   DAKPJH010000047 DAKPJH010000000
VERSION     DAKPJH010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19747
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.047"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..1446
                     /locus_tag="OY092_001383"
     CDS             <1..1446
                     /locus_tag="OY092_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076333.1"
                     /translation="AFFANTPKNTYLKSEQQTAKMYKDYFNDRFENEVKFQEKMKDNS
                     FLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSMINLEPTIADSELG
                     KFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKENGITNQQLNLNT
                     LFSNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKVRPVTLTLSR
                     ADTKKITLAVLEEAKKDKDLKKLMEEQGATKDFEKDIKKAIDDVKETKKDEFAKIQSK
                     IYTEKHTIVKREITITDKENNKTKIKGTNTLEDNKLKLDYALDFDQDKYTYAEAKYTI
                     KGVSSKEKDNKYSDKYEFGKKTEYDESKIKLDNQEKVDGTKRQDKGKITVALDKYSDE
                     NEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSSTKLKADIDFDDSGAKDFN
                     SLSSKDREKLEKEIEKNGGKMFESILKKASK"
     gene            1514..2680
                     /locus_tag="OY092_001384"
     CDS             1514..2680
                     /locus_tag="OY092_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076334.1"
                     /translation="MKTIHLFRIYHSFLLKKWYLIIYLLFILAALVITLTTIQHVTED
                     DNHFNIGVVDKDQSSETKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFV
                     FDKGMTKAFYKQGELPISVYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAP
                     KASHSDSINVMTDLLITGLNRSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTV
                     LKMNQDTVLKARLKMFHFSKERLLIIRALITWFYTMLWSIVGVVWIVFSIPNTFELYN
                     WPTLAIHLSYYVTFLILWLLLIELLTTGLLNSISKVILAIVILVLSGLTIPTIFLQHI
                     ANGVFNIQPFAVVTNQLLEIILNNYILELHPSFYLSFIALLIINLAVLVWRYRQ"
     gene            2677..3597
                     /locus_tag="OY092_001385"
     CDS             2677..3597
                     /locus_tag="OY092_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076335.1"
                     /translation="MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIP
                     ITIQDLDQTTASKSFVNKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQ
                     KLKENRLKETIQLYGRDDFIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAIN
                     KSYHKHTPESKIKFVSLTKQAQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLS
                     QYHLSRFKLYSTYVMTHTILLLLVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFI
                     LFHIQTISHRLFMTFIYALAMGIVYLTIFM"
     gene            3611..4270
                     /locus_tag="OY092_001386"
     CDS             3611..4270
                     /locus_tag="OY092_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076336.1"
                     /translation="MIEINNLSKRYRNKQIFNHLTMSFDSNRLTVLLGDNGAGKSTLL
                     RMIAGIEKANDGTINYFGEKWNQRQIQNHIGYVPQDIALFEHMTVAENIKFFKSLCKN
                     PINDTTINEYLQQLNFDDTSAKVSTLSGGNKRKINILVGLLGKPRILILDEPTVGIDL
                     KSRHDIHQLLNIMKSKCLIILTTHHLDEVEALADDIKLIGQDPFYQHVLEDKQWTYTY
                     Y"
     gene            complement(4322..5269)
                     /gene="lytM"
                     /locus_tag="OY092_001387"
     CDS             complement(4322..5269)
                     /gene="lytM"
                     /locus_tag="OY092_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine-glycine endopeptidase LytM"
                     /protein_id="HCX1076337.1"
                     /translation="MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTQMSAQSQD
                     VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANAN
                     GSGQTYVNPATTGDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNQAYNSHDGNG
                     KVNYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPE
                     NSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQ
                     IAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPMSYLQSR"
     gene            complement(5595..6587)
                     /locus_tag="OY092_001388"
     CDS             complement(5595..6587)
                     /locus_tag="OY092_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HCX1076338.1"
                     /translation="MCTGFTIQTLNNQVLLGRTMDYDYPLDGSPAVTPRNYRWTSRTG
                     TTGQTQYGFIGTGTDMEGFIYGDGVNEHGVAISTQYFRGYSSYGSTHKADAMNITQNE
                     IVTWILGYTTSIEDMKQQASQIHVVAVYLNDIGEVPPLHYHVSDATGQSVEVSFKEGE
                     VVIKDNPIGVLTNHPDLDWHYSNLRQYINISPYPATANLLEGVTIEPLGNEAGTFGLP
                     GGFTSTERFVRMAFMKANIAQNNDKEMDLMNAFYLLDAVNIPIGIVRPHDADNHYTMY
                     QTVINLTTRTLYIKYYGSNEIVALKLTDDLINRKDMTIFKPEKHITIRKLNDNQ"
     gene            6821..8197
                     /locus_tag="OY092_001389"
     CDS             6821..8197
                     /locus_tag="OY092_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076339.1"
                     /translation="MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTS
                     PAVLNLSISLTSFATGIFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALL
                     IIGRILQGLSAAILLPSTVGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIAT
                     NFGWQTNFIISIVIAFIAILLLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLT
                     QGFEQGWFSTFSFICLSIFIITTLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVL
                     NSGLGVTVVFFIYAQTHLGLSAAQSGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLII
                     GPLFPVIGITIISMTQLSASQYVIAVIIGFVICAIGNGLVATPGLTIAIFSMPNEKVG
                     LATGLYKMSGTLGGAFGIALSTTVFSMLQLNYAPSVAATVTFIVSIVLMILGSLSAYM
                     IIPKTVKS"
     gene            complement(8325..8717)
                     /locus_tag="OY092_001390"
     CDS             complement(8325..8717)
                     /locus_tag="OY092_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076340.1"
                     /translation="MQFKLKEEEIISFLELKYPEKEFEYGRLLVGQHKRDDLDVYYFG
                     DTFLMCTIISFKTFEIKETVELSYDAVNRIVLKDGWLFRKMRIETMQKVLKYGTSKLM
                     LTDFQKENYNKYIQGQKQRVIFENGHFV"
     gene            complement(8767..8947)
                     /locus_tag="OY092_001391"
                     /pseudo
     CDS             complement(8767..8947)
                     /locus_tag="OY092_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498838.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
     gene            9098..10096
                     /locus_tag="OY092_001392"
     CDS             9098..10096
                     /locus_tag="OY092_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCX1076341.1"
                     /translation="MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSE
                     RLGYAPNKHAKQLRGSKIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTAT
                     DLYDNIKHLIDRGIDGLIIAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTN
                     EYQGGQLAAQHLIELGHNNMIVVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTEL
                     SKRGGLTIVDDIMVQSATAIFAINDELAIGILRGLIEHGISIPKDISLIGYDDIDYAA
                     YVSPPLTTVAQPITDIGKTSLTLLLQRLQHLDKSIDMIELPTTLKIRATTGYHLSN"
     gene            10328..11209
                     /gene="rbsU"
                     /locus_tag="OY092_001393"
     CDS             10328..11209
                     /gene="rbsU"
                     /locus_tag="OY092_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose transporter RbsU"
                     /protein_id="HCX1076342.1"
                     /translation="MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIF
                     AIILAVVTSSGFPTGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLG
                     ASLWGVFALGNWPGIGHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLI
                     GEFGYWLYSAAPQATSIDGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQII
                     SGFFFAFGALTYLISAQPNMNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITI
                     IGLVLILVAASVTVFIK"
     gene            11224..11628
                     /gene="rbsD"
                     /locus_tag="OY092_001394"
     CDS             11224..11628
                     /gene="rbsD"
                     /locus_tag="OY092_001394"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HCX1076343.1"
                     /translation="MKKTAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAV
                     TKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEM
                     KSNLAHPLNKGNIRTGETTPYSNIALESNVTF"
     gene            11656..12570
                     /gene="rbsK"
                     /locus_tag="OY092_001395"
     CDS             11656..12570
                     /gene="rbsK"
                     /locus_tag="OY092_001395"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCX1076344.1"
                     /translation="MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGA
                     NQAIATARMQADTTFITKIGTDGVADFILEDFKAAHIDTSYIIKTAEAKTGQAFITVN
                     AEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKSHGV
                     TTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKT
                     VLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAID
                     FGNKASSLTVQKHGAQASIPLLEEVNQV"
     gene            complement(12667..12801)
                     /locus_tag="OY092_001396"
                     /pseudo
     CDS             complement(12667..12801)
                     /locus_tag="OY092_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498833.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12821..13582
                     /locus_tag="OY092_001397"
     CDS             12821..13582
                     /locus_tag="OY092_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1076345.1"
                     /translation="MSKEAGHTFLAKLGKTRLRPGGKEATDWLIQQGAFSQDKQVLEV
                     ACNMCTTSIYLAHTYGCHIQGVDINKKALEKAQENISAAGLESYIQVQQANAVKLPFD
                     DNQFDIVLNEAMLTMLPIAIKEKALREYYRVLKPGGILLTHDIVIVNESHATHVVKSL
                     SAAINVNVSPQTKLGWLDLYHQAGFNHVHYHTGPMSLMTPKGLIYDEGIVGTLKIINN
                     ALKKENRPMFCKMFKTMTKLRKDMNYITFVAKKEH"
     gene            complement(14077..15513)
                     /locus_tag="OY092_001398"
     CDS             complement(14077..15513)
                     /locus_tag="OY092_001398"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCX1076346.1"
                     /translation="MTKLPQNFMWGGALAANQFEGGYDKGGKGLSVIDVMTSGAHGKA
                     RQITESIDPNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVP
                     NEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVV
                     FERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVAHHELLAS
                     ALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFFFPDVQVRGYYP
                     SYAKKMLARKGYDFGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGG
                     LNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQLPLFIVENGFGAVDEVVDGHIH
                     DDYRIEYLKVHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDN
                     DGHGTMERLKKDSFYWYKQVIASNGDKL"
     gene            complement(15529..16320)
                     /locus_tag="OY092_001399"
     CDS             complement(15529..16320)
                     /locus_tag="OY092_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCX1076347.1"
                     /translation="MSNKYKDQAQDILTAVGGVENIVDVTYDTKGITIHMQHTIPSTA
                     NEVKQIVDVTSVAENDAQLVIKLNGNVDEVYQQLQRLIKDANVEEGANTDNINSQDTS
                     YTPQAKVTTPILVKAPIAGRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGL
                     ISMIVPTKHAIGIRSEEGVDIVIHIGVNTVDLEGKGFKCFVKQNDRVEAGQTLLQFDQ
                     QYIQEQGYNSDVIVVISNSADLGKVELTMNEIITTEDVIFKIFKN"
     gene            16469..17173
                     /locus_tag="OY092_001400"
     CDS             16469..17173
                     /locus_tag="OY092_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1076348.1"
                     /translation="MLKYEHIAKQLNAFIHHSNFKPGDKLPSVTQLKERYQVSKSTII
                     KALGLLEQDGLIYQAQGSGIYVRNIADANRINVFKTNGFSKSLGEHRMTSKVLVFKEI
                     ATPPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDDIAKGSIF
                     DYLESNMKLRIGFSDIFFNVDQLNSSEAALLQLSKGEPCLRYHQTFYTMTGKPFDSSD
                     IVFHYRHAQFYIPSKK"
     gene            complement(17399..19690)
                     /locus_tag="OY092_001401"
     CDS             complement(17399..19690)
                     /locus_tag="OY092_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HCX1076349.1"
                     /translation="MSMQSSYKRLVKVLLTILVIVFSILLVGGWYIFKNEAPRPTKIV
                     DQQGHTLVTKGELISGQAIYEKYGLTDYGSYLGNGSYLGPDYTAEALHHYLIGMRKYY
                     AQDIYHKQLHKLNHAELAVVKDKVMKEIRINRYSEKEDQLVLTPGQVYGLKYLQDYYK
                     KEFVNNPKQVGLNENMIKQFQNDDYMVAGNKVEHLSQFFFWGAWLSSTDRPGKTFSYT
                     NNWPYDVDAGNTLPSAGILWTAISVTLLIAGLAFIIYIQKRYQFDMKPTYESERELPK
                     IEVDRKITDSQRKVGKYLVVVMLLFLVQILLGELLAHYYVENKFFGIEIQRLFPFNIA
                     KTWHVQLVIFWVATTWLAAGIYIVPKVLGKEPKKQGVLVDILFWALIIVVMGSMIGEW
                     GHILGWIDSHWWLFGHFGWEYIELGKFWQILFIVGMVLWVIILCRGFLPAIRNKVQVN
                     HDKRHLLTLLFVGAIAIPLFYLASLFIMPNSHVTFADYWRWWIVHLWVEGIFEAFAVV
                     LIGFLMVNMKLTTIETTIRALYFQLILLLGTGIVGMGHHYYWQGDHSIWLALGSCFSA
                     LEVVPLCLLIWEAYTHYRLYKNSDIAFPYKGTFIFLASTGLWNAIGAGALGFLINTPA
                     VNYFEHGTQWTAAHAHGSMAGVYGMFSIAIALYVFKNITKKEFWTPKVEKWIKISCWA
                     LNIGLAGMVFVTLMPVGYIQLKDALEHGYWHSRLTSFYEQPLVKAIMWGRMPWDIIFT
                     VGVIILVVIFIRGYRHLKPKYRV"
BASE COUNT         6542 a         3635 c         3077 g         6493 t
ORIGIN      
        1 gcattttttg caaacacacc gaaaaataca tacttaaaaa gtgaacaaca aactgcaaaa
       61 atgtataaag attattttaa tgaccgtttt gaaaacgaag tgaagttcca agaaaagatg
      121 aaagataatt catttttatc ttcattagaa ttaagcgcag atgcatcaga tgaaattgtt
      181 aaggggcttg gtattcctaa atctgttgtt aatgcttcga aaattaaaat gtcatatgga
      241 catgatccta aaaaagagaa atcaatgatt aatcttgaac caacaatagc agactctgaa
      301 ttagggaaat tccagttagc tgcagataaa gataagcatt atttcgaatc accattattt
      361 aaagggaaat atagtgttaa taattctgat ttattatcaa cttattcaaa acttacaggt
      421 gaagatgaag aaacagcaaa agaaaatggt attacaaacc aacaactaaa tttaaatact
      481 ctttttagta atgctcaagc acaacaaagt gactacagca aaattgccga aaaatattcc
      541 gaacttattg tcgacaaatt agatgacgat aattttgata aaggtaaaaa agaagaaatt
      601 aaggttaatg gtgaaaagta caaagttaga cctgtcacgt taacacttag cagagctgac
      661 actaaaaaaa ttacattagc tgtattagaa gaagctaaaa aggataaaga ccttaaaaaa
      721 ttaatggaag aacaaggtgc tacaaaagac tttgaaaaag acatcaaaaa agcaattgac
      781 gatgtcaaag aaactaaaaa agatgaattt gctaaaattc aatctaaaat ttataccgaa
      841 aaacatacga ttgtaaaacg agaaattact attacagaca aagaaaataa taaaactaaa
      901 atcaaaggta ctaatacttt agaagacaat aagttaaaac tagattacgc acttgatttc
      961 gatcaagata aatacacgta tgctgaagcg aaatatacaa ttaaaggcgt atcttctaag
     1021 gaaaaagaca ataaatacag tgataaatac gaatttggta aaaagacaga atatgatgaa
     1081 tcaaaaatca aattagataa ccaagagaaa gtagatggca caaaacgtca agataaaggt
     1141 aaaattactg tcgcattaga taaatatagc gacgaaaatg aattcacttt tgaaaataat
     1201 atagattctg acgtaaaaaa taacactcag aaatctacgt taaatatcgg catcaaatat
     1261 gctgaagaac caattaattt cattttaaaa tctagcacaa aattgaaagc agatattgat
     1321 tttgatgata gtggtgcgaa agatttcaat agtctatctt caaaagatcg tgaaaaactt
     1381 gaaaaagaaa tcgaaaaaaa tggcggcaaa atgtttgaat caattttaaa aaaggcatct
     1441 aaataactaa aatataaaaa taagattgga aggtcatctt gcctttcaat cttatcattg
     1501 gaggagtggt taaatgaaaa caatacattt gtttcgcatc taccactctt ttttattgaa
     1561 aaagtggtat ttgattatct atttactatt tatattagcg gcactcgtta ttacattaac
     1621 gacaatccaa catgtaacag aagatgacaa tcattttaat ataggtgtcg tagataaaga
     1681 tcaatcaagt gaaacgaaat taatcttaaa ctctattggt aaagggagta acctaggaaa
     1741 aaatgtgagc attaaagcat atgatgataa gcaagcacat actttgttaa aaaaacataa
     1801 acttcaaggt tattttgttt ttgataaagg tatgaccaag gcattttata aacaaggcga
     1861 actaccaatt tcagtatata catatgatca acaatccatg aaaagtgtcg tgctatctca
     1921 gctaacagat tctgtttacc aacgtcttat gcgatcaatg ggtggcatct tagcttttca
     1981 agacttagca ccgaaagcat cacattctga cagtatcaat gttatgactg atttgctgat
     2041 tacaggatta aaccgttcag gtgcatttaa cttagaaccg attcatttat acgatacggg
     2101 cagttattat gcaattacag gatttttaac aacggtattc atctttgcac tatctttatt
     2161 tacagttttg aaaatgaatc aagatactgt attgaaagcg cgattgaaaa tgtttcattt
     2221 ttctaaagag cgtttgttaa tcattcgtgc gttgattaca tggttttata ctatgttatg
     2281 gagtatcgtt ggtgtagttt ggattgtgtt cagtattccg aatacctttg aattatataa
     2341 ttggccaacg ttagccattc atttaagcta ttatgttacc tttttaatac tgtggttatt
     2401 actcatcgaa cttttaacta caggcttgtt gaatagtatt agtaaagtca tattagctat
     2461 tgtcatcctg gtgttatctg gtttaacaat acctacgatt tttttacaac atatagcaaa
     2521 tggcgttttc aatattcaac cgttcgcagt tgtaacaaat caattgttag aaattatttt
     2581 aaacaactac attttagaac tgcaccctag tttctatctt agcttcatcg cacttttgat
     2641 aattaattta gctgtattgg tttggaggta tcgtcaatga agccttatat acaacttgtt
     2701 gtgttcaagc aatggttaca atacatcttg ctcgtaacaa ccattgtcat cgcactcgta
     2761 cttattggta tcggttaccg tgtagcacat gacaacttca aaataccgat taccattcaa
     2821 gatttagacc aaaccactgc atcaaaatca ttcgtcaata aaattaaaca atctgactat
     2881 gtaactatta aaaaagtcga tgaagatgaa agctatattg aagatgatgt tactaaaaag
     2941 gaagctattt taagtatgca aattcctaaa ggtttctctc aaaaattaaa agagaaccgt
     3001 ttaaaagaaa cgatacagtt atatggtaga gatgacttta taggtggtat tgctgtagaa
     3061 attgttagta gttcattata tgagcagcaa attcctaaca ttatttatga acaccttgag
     3121 gatatgaaac agcatcaatc catcgatgct atcaacaagt cctatcataa acatacacct
     3181 gaatctaaaa tcaaatttgt gtcgcttact aaacaagcac aacactctat ttcaattagc
     3241 ttaatctttg cggtgatttt atttgttagc gctgttcaag tagtacttca ttatcgttta
     3301 aaccaacaag cagcattgca acgattatca caatatcatt taagccgttt caaactatat
     3361 agtacttatg taatgacaca tacgattttg ttattgttgg tactattggc agttagtcta
     3421 tatttgtctc aaccactcag cttaatattt tacttaaaat cactgttact tatattgatt
     3481 tatgagatag gtatcgtctt tatcttattc catattcaaa caataagtca tcgattattc
     3541 atgacattta tatatgcact tgctatgggt atcgtatact tgaccatttt catgtaaagg
     3601 agcgtaactg atgatagaaa ttaataacct ttcaaagcgt taccgtaaca aacagatttt
     3661 caatcattta accatgtcct ttgatagtaa tcgattaacc gtattacttg gtgataatgg
     3721 cgctggaaaa tcaacattac ttcgtatgat tgctggtatt gaaaaagcta atgatggaac
     3781 tatcaactat ttcggcgaaa aatggaatca aagacaaata caaaatcaca tcggttatgt
     3841 gccacaagac attgcgttat ttgaacacat gacagtggct gaaaacatta aattttttaa
     3901 atcactttgt aaaaatccaa ttaacgatac aactatcaac gaatatttac agcaattaaa
     3961 ttttgatgat acgtctgcca aagtatctac attgtccggt gggaataaac gtaaaattaa
     4021 tatattagta ggtttactag gtaaacctcg aattctcatt ttagatgaac cgacagttgg
     4081 tattgattta aaatctagac atgacatcca ccaactactt aacattatga aatctaaatg
     4141 tttaattata ttaactaccc atcatttaga tgaagttgaa gcacttgcag atgatatcaa
     4201 gttaattggc caagatcctt tttatcaaca tgttttagag gacaaacaat ggacttatac
     4261 ctattattaa aacgaaaaaa tcccaagctg cgtatgatat cgcaacttgg gattttctgt
     4321 attatctact ttgcaagtat gacattgggt ctactgcata ttgattaccg atgccaccag
     4381 acatacgttg gaagtgtacg tgaggcgctg ttgaattacc cgtactacct gaatatgcaa
     4441 tttggtcacc agctttgact ttatcaccag ctgaaacagt taaacgatta ttatgcatat
     4501 accattggta gttattactg ttcgcttctt taatcgttac ttgattacca ccaccatagt
     4561 tactccaacc tgcttgtact actgtaccat cagttaatga gtaaactggt gaattttcag
     4621 gcattgcata gtcgacaccg taatgcgcac caccaccgtg atattgtcca tatggttgta
     4681 gttgtttacg acttgttaac cagcttgcgt ctttcgcatg accactagct gtcgctttac
     4741 ttgctgatcc gccattttga ttagacgtgc cattagggta attgaccttt ccattaccat
     4801 catggctgtt atacgcttgg ttgttactat gtgaataata gctcgcgtct ggacctacat
     4861 ttgattgata accatattga ttaatgtgct gttggctttg actcgctgtg tagtcattgt
     4921 tatctcctgt tgttgctgga ttcacatatg tttgaccgct tccattggca tttgcatttt
     4981 ttggataaca gttataaaaa taatgcgtat gtccttgagc atctacgaat gtatagctat
     5041 attctttatt atcaaacatt gcttgattcc agttaccatc aggtgtgtga tgataatccc
     5101 cattagaatc aattgtataa taagtaccat aagatacgtc ttgtgattgt gctgacattt
     5161 gtgtatgtgc ttgttgggtg tttgtcgttt ctgctgcatc tgcttgatgc gccattgtaa
     5221 atgtagcgaa gcccatcgtt gcaatcgctg ctgctgttaa ttttttcatg tataaaacat
     5281 cctccattaa agttaaagtt agttttcaat taaactgtac tgcacatact aaaagaatta
     5341 gacaactgag taaaggattt aattctcatt ttccaactat ttaatattcc cgaaatgttt
     5401 tactaaactc attacattgt cattacaaaa tagccataca ttgatattaa aatgacatct
     5461 ctcactgcat tcgtttaacc ttttataaat tttcaaaact aacaactaat cattcgtcca
     5521 tgttcgcggt tcaacgctaa tgtatgatag taatcatcca tcaaatcata tcaaccaaat
     5581 tccattatca atcgctattg attgtcattc aactttctaa tagtgatatg cttctcaggc
     5641 ttaaaaatcg tcatatcttt tctattaatt aaatcatctg tgagctttaa tgctactatt
     5701 tcattgctac cataatactt aatatataac gttcttgtag ttaaatttat tacggtctga
     5761 tacatcgtat agtgattgtc agcatcatgc ggacgtacaa ttccaatcgg tatatttacc
     5821 gcatctaata aataaaatgc attcattaaa tccatttctt tatcattgtt ttgagcaatg
     5881 tttgctttca taaatgccat tctcacaaag cgctcagttg aagtaaatcc acctggcaat
     5941 ccaaatgtac ctgcttcatt gcctaaaggt tcaatcgtta caccttccaa taaatttgct
     6001 gttgctggat aaggagaaat attgatatat tgccttaaat tactataatg ccaatctaag
     6061 tctggatgat ttgttaagac accaataggg ttatctttta taaccacttc accctcttta
     6121 aatgaaactt cgactgattg tccagttgca tcggaaacat gataatgcaa tggcggaact
     6181 tcaccgatat catttaaata tacagctaca acatgtattt gggatgcttg ttgtttcata
     6241 tcttcaatgc ttgttgtata tcccaaaatc catgttacaa tttcattttg cgtaatattc
     6301 atcgcgtccg ctttgtgtgt tgatccatat gaactataac ctcggaaata ttgtgttgaa
     6361 atggcaacgc catgttcatt aacaccatca ccataaataa aaccttccat atctgttcct
     6421 gtgccaataa agccatattg cgtttggcct gtcgtgccag tgcgagatgt ccaacgataa
     6481 tttctaggcg tcactgctgg cgaaccatct aatggataat cataatccat cgtgcgtcca
     6541 agaagtactt gattatttaa agtttgtatt gtgaatcctg tgcacattgt tctcactcct
     6601 ctgtaccttc atttacttta atcactttca aataaagctg tttcacttaa acatactata
     6661 aaaaatcaat catacaagca attaattgat attcattctc aataactgtg gtatgatatg
     6721 taaggaaatc atgacttatg tgtgagtgaa cgatcatcta tacatccgtt cacttcatct
     6781 catgactttc tatatttaat ttttacaagg agtgacatct gtgaataaca cacaatcttc
     6841 accacgcagt aatattatta ttgcgattat gttgtctgca ttaacatatt ggttgtttgc
     6901 acaatcattt attaatatag gacctctcgt tggtcaaacg tatcaaacct ctcctgccgt
     6961 gttaaattta tctattagtt taacttcctt cgccacaggt atcttcatgg tggctgcagg
     7021 tgatattgct gataaaatag gacaactgag aatgacatac atgggtctca taatcagtat
     7081 gtttgcatct cttctattaa ttatatcgga catcactgca ctgctcatca tcggtagaat
     7141 tttacaaggt ctatcagcag ctatcttgtt accttcaaca gttggcgttt taaataatca
     7201 atttaaagga gaacatttaa gacgagcgat tagttatcta atgattagta ctgttggtgg
     7261 catcggccta gctggtgtta tcggcggttt aatcgccaca aatttcggat ggcaaacgaa
     7321 tttcatcatt agtatagtca ttgctttcat tgccatattg cttctaaaag gcacacctga
     7381 aaaagtaagt caacatagcc atcgtcatcc attcgattac aaaggtatgt cgattttcgc
     7441 tgttatgatt ggtagcttta cattattgtt aacacaagga ttcgaacaag gttggtttag
     7501 tacattttca ttcatttgtc tgagcatttt tatcatcact acgttgatat tcatcatcat
     7561 cgaacgtcga catgaagtac cttttattga tttttcagta ttacgcaacc gtccgttcat
     7621 tggtgcattt ttaaataact ttgttttaaa tagcggtcta ggcgtaacag tggtcttttt
     7681 catatatgct caaacacacc ttggtttatc agctgcgcaa tctggacttg ttacattgcc
     7741 atatgccatt gtggcagttg cgatgattcg tttaggtgaa aaagcaacat tacgtttcgg
     7801 tggcaaattg atgctcatca ttggtccgtt gttccctgtc atcggcatca ctattattag
     7861 catgactcaa ttatcggcat cacaatatgt cattgcagtt atcattggtt tcgtcatttg
     7921 cgcaattgga aatggtttag tcgcaacacc cggccttaca attgcaattt tcagtatgcc
     7981 aaatgaaaaa gttggtttag ctacaggatt atataaaatg agtggtacat taggtggcgc
     8041 ctttggtata gcactaagta ctacagtttt cagtatgtta caactaaact atgcaccaag
     8101 tgtagctgca accgtaacat ttatcgtcag cattgtattg atgatccttg gctcattgtc
     8161 tgcatacatg atcattccaa aaacagttaa atcttaaata taatagaaga attatgtttc
     8221 gaaatatctt tatcacttta aaatgatata caagaaattc aagaaaaata agcgaagaac
     8281 gtttttctct gttcttcgct tactctaatt atattcacta tcaattagac aaaatggcca
     8341 ttttcaaata tcacgcgttg tttctgacct tgaatatatt tattataatt ctctttttga
     8401 aaatcagtta acattaattt agatgtaccg tattttaaca ctttttgcat tgtttctatt
     8461 ctcatttttc taaataacca tccatctttt aacacaatac gattaacagc atcatatgat
     8521 aattctactg tttctttaat ttcaaatgtc ttgaatgaaa taatcgtgca cattaaaaac
     8581 gtatcaccaa agtaataaac atctaaatca tcacgtttat gttgtccaac taacaaacga
     8641 ccatattcga actctttttc tggatatttc aattctaaaa aactaataat ctcttcttct
     8701 tttaatttga attgcattta aaaacatcct ctcttaagtt ttaacaagcc ttaattaaaa
     8761 attttttcaa tcacatagtt caatatacat catttcgtta tattttttaa tacttttttt
     8821 caaaaacaaa tattttattc tttaaaataa tgacttttgt attcctcatc acaataaaca
     8881 ttttaaaatt ctagttatca taatcattca aaggtattaa ccttaataat atattctctc
     8941 gcctcaacct taatcgcata ctataggcgt ctgtttgtag acaataaaag tcattcacgt
     9001 cttcatatgt catcaaatgt ttatcatgat atgatgaata taataatcgg gtatataact
     9061 gtatgattaa ttacacaata aagagaagga atataatatg aaaaaagtgt caattaaaga
     9121 tgttgctaga gaagctggtg tatcagttac aactgtgtca catattttaa atcataatga
     9181 tagtcgtttt tccgcaacaa cgataaaaaa cgtacatgct gtttcagaac gtttaggcta
     9241 tgcccctaat aaacatgcaa aacaattgcg cggcagtaaa attcaaacta ttggcgtcat
     9301 tttacctagc ttaacaaatc cgtttttctc agcactaatg caaagtattc atgaccataa
     9361 accatctgat gttgatttat gctttttaac atctacagca actgatttgt atgacaatat
     9421 taaacattta attgatcgag gtattgacgg attaattatc gcacaataca tatcatcccc
     9481 ggacgcccta aataactatc taaagaaaca tcatgtacct tatgtcgtac tggatcaaaa
     9541 tgaccatcaa ggctatacag attttgttcg gacaaatgaa tatcaaggtg gacaacttgc
     9601 agcacaacat ttaatagaac tcggtcacaa caatatgata gttgttgcac catatgacat
     9661 gatggcgaat atgtcgactc gtgtcgctgg atttgtcgat actttgcgcg cgaatcaatt
     9721 gccagaacca caaatcgtcc atactgaatt atctaagcgc ggtgggctaa ccattgttga
     9781 tgacatcatg gttcaatctg ccactgcaat cttcgctatt aacgatgaac tcgctattgg
     9841 cattttacga ggactaattg aacatggcat cagtatcccg aaagatatct cattaatagg
     9901 ttatgacgac attgattatg cagcgtacgt ctcgccacct ttaactactg tggcacaacc
     9961 tataactgat attggcaaaa catctttaac cttattactt caacgattac agcacttaga
    10021 taaatccatt gatatgattg aattaccaac gactttaaaa attcgtgcaa caactggcta
    10081 tcatctttca aactaactac gtatcttccg aaatatactc atcattgtta ggcccttagc
    10141 gttgctttaa tgctgagggt ttttaatcat aattatttca ctaagaaatt aaaataataa
    10201 tgtatgaatt tttaaatatg atttaaacgt tttcagcttt tatgaaaacg catgcatttt
    10261 acaaataaaa atggtacgat ggcactggta aaacgtttta ctaaaaacaa atcgtgaggt
    10321 gtataacatg agcattgttg cattacttat cgggttaggc cccttaattg gctggggatt
    10381 cttcccaaca gtcgcttcaa agtttggtgg taaacctgta catcaaatta tcggtgctac
    10441 tgtaggtacg ttaatcttcg ctattatatt agccgtagtc acatcaagcg gcttccctac
    10501 tggaaccaat ttgctattcg ccttattatc aggtgctggt tggggattcg gacaaatcat
    10561 tacatttaaa gcgttcgaat tagtcggttc atctcgtgcc atgccagtca caacagcatt
    10621 ccaattatta ggcgcatctt tatggggtgt ctttgcatta ggaaattggc caggcattgg
    10681 tcataaaatc attggattta cagctttagt cgttattcta attggtgcgc gtatgacagt
    10741 ttggagtgaa cgcaaagaag caagtaacgc caaaaattta cgtcgtgcag tggtacttct
    10801 gttaattggt gaatttggat actggttata ttcagctgca ccgcaagcaa cttctattga
    10861 tggcctaact gcctttttac ctcaagcaat gggtatggta attgttgcag tcatttatgg
    10921 ctttatgaat atgaaagcag agaatccatt ccgtaataaa attacgtggt tacaaattat
    10981 ttcaggtttc ttctttgcat ttggtgcctt aacatatctt atttcagcac aacctaatat
    11041 gaatggttta gcaactggat ttattctttc tcaaacatcc gttgtgcttg ctacattaac
    11101 tggtatttat ttcttaaaac aacataaaac gtcaaaagaa atggttatta caatcatcgg
    11161 cttagtactc attttagtag ccgcttctgt tacagtattt ataaaataag gagtgtagat
    11221 gtcatgaaaa aaacagctgt tttaaatgaa catatttcaa aagcaatcgc gacaattggt
    11281 cattttgatc tattaacgat taatgacgct ggcatgccaa ttccaaatga tcatcgtcgt
    11341 atcgacctag ctgtaactaa aaacttacca cgctttattg atgtcttagc tacagtgtta
    11401 gaagaaatgg aaatccaaaa aatatactta gcagaagaaa taaaagaaca taaccctaca
    11461 caattgcaac aaattaaaca attgatttca tcggaaatcg aaatcatttt cattcctcac
    11521 gaagaaatga aaagtaactt agctcaccca ttaaataaag gtaatattcg tactggtgaa
    11581 acaacgccct actctaatat tgcattagaa tcgaatgtta ctttttaaaa gttataactt
    11641 gaaaggagcg tacacatgac caacaaagtt gttattttag gttcaacgaa tgtcgatcaa
    11701 tttttaacag ttgaaagata tgcacaacca ggcgaaacat tacatgttga agaagcacaa
    11761 aaagcattcg gcggaggtaa aggtgccaac caggctattg ccactgcacg catgcaagca
    11821 gacacaacat ttattactaa aattggcact gatggcgttg ctgatttcat cttagaagat
    11881 tttaaagcgg ctcatattga tacatcatat attatcaaaa cagctgaggc aaaaacgggc
    11941 caagccttta tcactgtgaa tgcagaagga caaaacacca tctatgttta tggtggtgcg
    12001 aatatgacga tgacacctga agatgttatt aacgcaaaag acgctataat caatgcagac
    12061 tttgtcgttg cacaattaga agtacccatc ccggctatta tatctgcatt tgaaattgcc
    12121 aagtcacatg gtgtgacgac agtattaaat cctgcaccag cgaaagcatt acctaatgaa
    12181 ttattgtcac taatcgatat tattgtgcca aacgaaacag aagccgaatt gttatctggg
    12241 attaaagtaa ctaatgaaca atctatgaaa gacaatgcta attacttttt atctttaggc
    12301 attaagactg ttttgattac gttaggtaag caaggtacat attttgctac taaaaatcaa
    12361 agccaacaca tcgaagctta taaagtaaat gcgattgata caactgctgc aggcgacaca
    12421 tttattggtg catttgtcag tcgcttaaac aagtcgcaag ataacttagc agatgctatt
    12481 gattttggta ataaagcgag ctcactcact gtacaaaaac acggcgcgca agcatctatt
    12541 cctctactag aagaagtaaa tcaagtttaa atgaatcaaa cacagctatg atttgaaggt
    12601 ttagcatata acatgcaaca ttcgtatatc atggctgtgc tttttatctt tataaaacat
    12661 catctactag aaataatttt ccactaaacc tatgcttgat gactcatgtt tagttataaa
    12721 tgaagtgaca attttttgtc atctgtttaa ctttcaaatt atcgcatata aatatgctat
    12781 attaatgata atgattatca attaataagg aggttatgtt atgtctaaag aagccggtca
    12841 tacattttta gctaaattag gaaaaactcg tctacgcccc ggtggtaaag aagcaacaga
    12901 ttggttaata caacaagggg cattttcaca agataaacaa gtgttagaag tggcatgtaa
    12961 tatgtgtacg acatctattt atctagctca tacatatggc tgtcacattc aaggcgttga
    13021 tataaataag aaagcattag aaaaagcaca agaaaatatc tcagcagcag gtcttgaatc
    13081 atatattcaa gttcaacaag cgaatgctgt taaattgccc tttgatgaca atcaattcga
    13141 tatcgtttta aatgaagcaa tgttaacaat gttacccatc gccataaagg aaaaagcatt
    13201 acgcgagtac taccgagtct taaagcctgg gggtatcttg ttaacacatg atattgtcat
    13261 cgttaatgaa tcacatgcca cacatgtagt taaatcatta tctgcagcaa ttaatgtcaa
    13321 tgtctcaccg cagacgaaac ttggctggtt agatttatat catcaagctg gttttaatca
    13381 tgtacattat catactggtc caatgagttt aatgacacct aaaggtttaa tttatgatga
    13441 aggtattgtc ggaactttaa agattatcaa caatgcttta aaaaaagaaa atcgaccaat
    13501 gttttgtaaa atgtttaaaa cgatgactaa actgcgaaaa gatatgaatt atattacttt
    13561 tgtcgctaaa aaagagcact aaatataatg ccactaactg tactttatat ctatgtttga
    13621 ctgttacttt aatttctttg tgacactaat catctactta acaatatcgt tatcgttgat
    13681 tagtaggtca tcaattttgg ttaaagactt ttataaacac tcaaacatta acactataca
    13741 tacttagtta gtggcattat ttttttctta aaattttaac atcacgggat tggaacagaa
    13801 atgatatttt cgcaaaattt atttatgtcc ctccccaact tgcacattat tgtaagctga
    13861 ctttccgcca gcttctatgt tggggccccg ccaacttgca ttgcctgtag aatttctttt
    13921 cgaaattctc tatgttgggg ccccgccaac ttgcacatta ttgtaagctg actttccgcc
    13981 agcttttgcg ttgggggccc gccaatacaa cactttaggt cctactatat taatttatgt
    14041 ctcgggctct aactctaaaa tacttataat atacctttat aatttatctc catttgatgc
    14101 tatcacttgt ttataccaat agaacgaatc ttttttcaag cgttccatcg tgccatgacc
    14161 atcattatct cgatcaacat atattaaacc atagcgtttc ttcatttcac cagttgtaaa
    14221 tgaaacaata tcaatgattc cccacggcgt ataaccgatt aaatctacac catcttgatc
    14281 aactgcttct atcgctgctg taatatgtac ttttaaatat tcaatgcgat aatcatcatg
    14341 aatatgtcca tctaccactt catcaactgc accaaaacca ttttccacaa taaaaagtgg
    14401 caactgataa cgatcatata acacattcaa tgtatatctt aagccatctg gatcaatcgc
    14461 ccaaccccaa tcactcgttg cgatatgcgg attctccaca gaatgattca aaccaccgtt
    14521 gacgatgttg ttttcaactg tagtatcaac atcatgtttt acagccgtag acatgtaata
    14581 actaaagcca atataatcaa ccgtgccctg ctgtaaaata ctgtcgtccc cttcttgcca
    14641 tccaaaatca tatccttttc gtgccaacat ttttttagca tagcttggat aataacctct
    14701 tacttgaaca tccgggaaaa agaaacgtaa gcgattcgca atttgtgctt ccatcatatc
    14761 tttcggatga cacgaatatg gataaatggg tacatgtgaa atcattgttc caatcttaaa
    14821 tttcggatta atctctttac caagacgaac cgctaaagca ctggctaaaa gttcatgatg
    14881 tgctacttga tacaagactt cttcgggatt atcattttct gttaatgcta ccccagaatt
    14941 tgtccataaa aagataggat ttgatgtgtc catctgatta ttaatttcat taaacgtcat
    15001 ccaatatgtc actttatctt tatatctttc aaatacaaca cgcgcaaaat gcacaaaata
    15061 atcgacaact tctctatttc taaatccacc ataatgtttc gctaaatgaa gtggcatctc
    15121 aaaatgtgat aacgtcacaa caggttcaat accttgtgca attaattcat caaagatacg
    15181 atcataaaag gcaagtcctt cttcatttgg cacatcttca tccccattcg gaaagatacg
    15241 tgtccacgca atcgacgtac gtaaacattt caatcccatt tctttaaaca aggcaatatc
    15301 ttccttataa cgatgataaa aatcaatacc ttcatgattt ggataatagt gatttggatc
    15361 tatagattct gtaatctgac gtgctttgcc atgtgcacca ctcgtcataa catcaattac
    15421 acttaatcct ttgccacctt tatcatatcc accttcaaat tgatttgcgg caagagcgcc
    15481 accccacata aaattttgcg gtaattttgt cattattaca acacactcct agtttttaaa
    15541 tattttaaaa ataacatctt cagtcgtaat gatttcattc attgtcagtt ctacttttcc
    15601 taaatcggca gagttgctaa taacgacaat aacgtctgag ttataacctt gttcctgaat
    15661 atattgttga tcgaattgta acagtgtttg cccagcttca acacgatcat tttgctttac
    15721 aaagcacttg aatcctttac cttccaagtc aactgtattc acgccaatat gaatgactat
    15781 gtccacacct tcttctgaac gaataccgat agcatgttta gtaggtacaa tcatagatat
    15841 taaaccattg aacggtgcga ttactttgga ttcttcatga gctttgattg ccaagccttc
    15901 acctaccatt ttctctctaa aaattgaatc tcttacttct ttaagtaaaa tacgacgacc
    15961 agcgattggt gctttcacta aaatcggtgt tgtcactttt gcttgaggtg tataacttgt
    16021 atcttggcta ttaatattgt cagtattcgc accctcttca acattagcat ccttaattaa
    16081 tcgctgtaat tgctgataca cttcatcgac atttccgttt aattttatga ctaactgcgc
    16141 atcattttct gctacagatg tcacatcaac tatttgtttc acttcatttg ctgtagaagg
    16201 aattgtatgt tgcatatgaa ttgtaatgcc cttcgtgtca tacgttacat caacaatgtt
    16261 ttcgacacca cccacagctg taagaatgtc ttgggcttgg tctttatatt tattactcat
    16321 aaatattacc ccctcaactt gatagtagaa tgaaaatgta tttacttacc tccaattata
    16381 attgtaccgg ttcattttgt aaatgacgat acaattataa tattttgtgc tataataatt
    16441 acagacaaag tgaaatgagg ataaaatatt gttaaagtac gaacatattg ctaagcaact
    16501 taatgcgttt atacatcatt ctaatttcaa acctggtgat aagttgccaa gtgtaacgca
    16561 attaaaagaa cgttatcaag taagtaagag tactatcatt aaagcattag gcttattgga
    16621 acaagatggt ttgatctatc aggcacaagg tagcggtata tatgtgagaa atattgcaga
    16681 tgcaaatcgt atcaatgttt ttaagaccaa tggtttttct aaaagtttag gcgaacatcg
    16741 aatgacaagt aaggtgcttg tttttaagga gattgcaacg ccacctaaat ctgtacaaga
    16801 tgaactccaa ttaaatgcag atgataccgt ctactattta gagcgattaa gattcgtgga
    16861 cgatgatgtt ttatgtatcg aatattctta ttatcataaa gaaatcgtga aatatttaaa
    16921 tgatgatatt gctaagggct ctatcttcga ctatttagaa tcaaacatga aacttcgtat
    16981 tggtttttca gatattttct ttaatgtaga tcaactcaat tcaagtgaag cggcattact
    17041 acaattatct aagggcgaac catgtttacg ttatcaccaa acgttttata caatgactgg
    17101 caaacctttt gattcgtctg acatcgtatt tcattatcgt catgcacagt tttatattcc
    17161 tagtaaaaag taatacatac atcaaaacgt ctatattcca gttataaacc ggagtataga
    17221 cgttttataa gacataattt ctttaaaaac agtgagaagt acatttttaa tcagaaaatt
    17281 actttatact gttctttatg tttacatgat ctaagaactt atagtttgaa tcctattgta
    17341 taatatctct tcccctcaaa cgttaaaaca cactaaaatc actcggtaat atgatgatct
    17401 atactctgta ttttggtttt aagtgtctgt atccccttat aaaaataact actaatataa
    17461 tgacacctac tgtgaatata atgtcccaag gcattctccc ccacatgatt gcttttacaa
    17521 gtggttgttc ataaaatgac gttagtcttg aatgccaata accatgttct aatgcatctt
    17581 taagttggat ataacctact ggcattaatg taacgaacac catacctgcc aagccaatat
    17641 ttaaagccca acatgatatt ttaatccatt tttcaacttt cggtgtccaa aattcttttt
    17701 tagtaatatt tttaaaaaca tacaacgcaa ttgcaattga gaacatacca tacacgccag
    17761 ccatagaacc atgggcatgt gctgcagtcc attgcgtacc atgttcaaag tagttaactg
    17821 ctggtgtgtt aattaaaaag cctaatgctc cagcaccaat tgcattccac aatcctgttg
    17881 aagcaagaaa aataaatgta cctttgtaag gaaaagcgat gtcactattc ttatataagc
    17941 gatagtgtgt gtatgcttcc caaattaata aacaaagcgg cacgacttct aatgctgaaa
    18001 aacaagaacc cagtgctagc catatggaat gatcaccttg ccaatagtaa tgatgaccca
    18061 taccaacaat acctgtacct agtaataaga ttaattgaaa atataatgca cgaatcgtcg
    18121 tttcaatggt agttaatttc atattaacca ttaagaaacc aatcaacact acggcaaatg
    18181 cttcaaatat accttcaacc cataagtgaa caatccacca tcgccagtaa tcggcaaacg
    18241 tcacatgtga attcggcatt ataaataatg atgcaagata aaataacgga attgcaattg
    18301 ctccaacaaa caatagcgtc aataagtgac gtttatcatg attcacttgt actttgttgc
    18361 gaatagctgg taaaaaacct cgacaaagaa tgataaccca taagaccata cctactataa
    18421 ataatatttg ccaaaattta cctaattcta tatattccca accaaagtgc ccgaatagcc
    18481 accaatgaga atcaatccaa cctaaaatat gaccccattc tccaatcatg ctgcccatca
    18541 caactatgat taaggcccaa aacaagatat ctactaatac gccttgtttc tttggttctt
    18601 tgcccaatac tttaggtaca atgtatattc ctgctgctaa ccaagtcgta gcaacccaga
    18661 aaataactaa ttgcacatgc catgtcttcg caatattaaa tggaaagagc ctttgtattt
    18721 ctataccaaa aaatttattc tctacataat aatgtgccag taattcgcct aataatattt
    18781 gaaccaaaaa tagtaacatg acaacgacta aatatttccc aacttttcgt tgactatcag
    18841 tgattttacg atccacttca atctttggta gttcccgttc cgactcatac gtcggcttca
    18901 tgtcaaattg ataacgcttt tgaatatata taatgaatgc caagcctgca atcagtaatg
    18961 ttacagatat agcagtccat aaaatccctg cactaggcaa cgtatttcct gcatccacat
    19021 cgtatggcca attatttgta tatgaaaatg tttttccagg tctatctgtt gacgatagcc
    19081 aagcacccca gaaaaagaat tgacttaaat gttcaacttt atttcctgcg accatataat
    19141 catcattttg aaactgttta atcatatttt catttaaccc tacttgttta gggttattaa
    19201 caaactcttt tttataataa tcttgcaaat attttagacc gtatacttgt cctggcgtta
    19261 atacaagttg atcttctttt tcagaataac gattaatccg tatttctttc atcactttat
    19321 ctttaactac ggctaactct gcatgattta atttatgaag ttgcttatga taaatatctt
    19381 gtgcataata tttacgcatg ccaatcaggt aatgatgtaa tgcctctgct gtataatctg
    19441 gacctaaata ggaaccattg cctaggtagg agccataatc tgttaaccca tatttctcat
    19501 atatcgcttg cccactgatc agctcgcctt ttgtaacaag cgtatgacct tgttgatcta
    19561 ctatctttgt tggacgaggt gcttcatttt taaaaatata ccaaccacct actagtaaaa
    19621 ttgaaaacac aatcactaaa atcgttagta gcactttaac taaacgttta tatgaacttt
    19681 gcatactcat ttataaaatc tcctcttaat tgcattctta catataagca tacgccgttt
    19741 ttttata
//
LOCUS       DAKPJH010000048        19423 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.048, whole genome shotgun sequence.
ACCESSION   DAKPJH010000048 DAKPJH010000000
VERSION     DAKPJH010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19423
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.048"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            67..849
                     /gene="modA"
                     /locus_tag="OY092_001402"
     CDS             67..849
                     /gene="modA"
                     /locus_tag="OY092_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1076350.1"
                     /translation="MKMKRFIAIVMALFLVLAGCSNSNDNQDNKKDATDNGKKQEIQV
                     AAAASLTDVTKKLASEFKKEHKNADIKFNYGGSRALRKQIESGAPVDVFMSANTKDVD
                     ALKDKNKAHNTYKYAKNSLVLIGDKDSNYTSVKDLKGNDKLALGEVKTVPAGKYAKQY
                     LDNNNLFKEVESKIVYAKDVKQVLNYVEKGNAKQGFVYKTDLYKQNKKIDTVKVIKEV
                     ELKKPITYEAGATSDSKLAKEWMEFLKSDKAKEILKEYHFAA"
     gene            863..1534
                     /gene="modB"
                     /locus_tag="OY092_001403"
     CDS             863..1534
                     /gene="modB"
                     /locus_tag="OY092_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HCX1076351.1"
                     /translation="MPDLTPFWISIRVAVISTIIVTVLGIFISKWLYRRKGSWVKVLE
                     SLLILPIVLPPTVLGFILLIIFSPRGPIGQFFANVLHLPVVFTLTGAVIASVIVSFPL
                     MYQHTVQGFRGIDTKMINTARTMGASETKIFLKLILPLAKRSILAGIMMSFARALGEF
                     GATLMVAGYIPNKTNTLPLEIYFLVEQGRENEAWLWVLVLVAFSIVVISTINLLNKDK
                     YKEVD"
     gene            1535..2140
                     /locus_tag="OY092_001404"
     CDS             1535..2140
                     /locus_tag="OY092_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1076352.1"
                     /translation="MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMI
                     AGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAE
                     PSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDT
                     TKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG"
     gene            2309..3313
                     /locus_tag="OY092_001405"
     CDS             2309..3313
                     /locus_tag="OY092_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HCX1076353.1"
                     /translation="MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGL
                     VRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDY
                     IAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKHRIPWIYGGVVQSTYTEAAF
                     IPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITY
                     GDIWEGSHYSFGFSKMQRSDCTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENASITH
                     DILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
                     "
     gene            3344..3850
                     /locus_tag="OY092_001406"
     CDS             3344..3850
                     /locus_tag="OY092_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HCX1076354.1"
                     /translation="MGEHQNVKLNRTVKAAVLTVSDTRDIDTDKGGQCVRQLLQADDV
                     EVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEI
                     EGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELN
                     HLIHELTK"
     gene            complement(3852..4346)
                     /gene="moaC"
                     /locus_tag="OY092_001407"
     CDS             complement(3852..4346)
                     /gene="moaC"
                     /locus_tag="OY092_001407"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HCX1076355.1"
                     /translation="MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIFKQI
                     SNNTNTKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDVHFSWDETNAPLYTLNI
                     QTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQR
                     QSNQ"
     gene            4409..5668
                     /locus_tag="OY092_001408"
     CDS             4409..5668
                     /locus_tag="OY092_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HCX1076356.1"
                     /translation="MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDI
                     VATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVR
                     IMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETTTGDVVLKKGQV
                     INPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALA
                     EKLGLEVGIYKTQQDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAE
                     VLFNKVAMRPGSVTTVAFADGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQ
                     IIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPG
                     GSRGFKAGHTVDIILTESDAAEEELLL"
     gene            5665..6150
                     /gene="mobB"
                     /locus_tag="OY092_001409"
     CDS             5665..6150
                     /gene="mobB"
                     /locus_tag="OY092_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HCX1076357.1"
                     /translation="MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKKDI
                     QLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEG
                     FKNADFEKVIVYRNEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQL
                     T"
     gene            6164..6610
                     /locus_tag="OY092_001410"
     CDS             6164..6610
                     /locus_tag="OY092_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HCX1076358.1"
                     /translation="MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKT
                     EYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAISSPHRK
                     DAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE"
     gene            6616..6849
                     /gene="moaD"
                     /locus_tag="OY092_001411"
     CDS             6616..6849
                     /gene="moaD"
                     /locus_tag="OY092_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HCX1076359.1"
                     /translation="MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINN
                     KKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG"
     gene            6856..7455
                     /gene="mobA"
                     /locus_tag="OY092_001412"
     CDS             6856..7455
                     /gene="mobA"
                     /locus_tag="OY092_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HCX1076360.1"
                     /translation="MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNE
                     IIISTNAQLATQFQYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMIT
                     GKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFK
                     NVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL"
     gene            7475..8497
                     /gene="moaA"
                     /locus_tag="OY092_001413"
     CDS             7475..8497
                     /gene="moaA"
                     /locus_tag="OY092_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HCX1076361.1"
                     /translation="MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFL
                     PKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLT
                     TNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL
                     NVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLT
                     MIEQHFEIDRVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFY
                     GCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVDNRQRKKIN
                     MNYIGG"
     gene            complement(8782..8952)
                     /locus_tag="OY092_001414"
     CDS             complement(8782..8952)
                     /locus_tag="OY092_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076362.1"
                     /translation="MFRFIYFGQLVVYSTTFIPKKDILQLNDMGCDINVKEPLKIYYV
                     VILKSGIEMIFS"
     gene            9078..9428
                     /gene="sarV"
                     /locus_tag="OY092_001415"
     CDS             9078..9428
                     /gene="sarV"
                     /locus_tag="OY092_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarV"
                     /protein_id="HCX1076363.1"
                     /translation="MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEK
                     ISGKELRDTLHFEMLWDTSKIDLIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLL
                     DKITKEIEVLSVTN"
     gene            complement(9530..10741)
                     /locus_tag="OY092_001416"
     CDS             complement(9530..10741)
                     /locus_tag="OY092_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076364.1"
                     /translation="MTNQGSLNKSPIFTKSFTINFFVNFIVYLCMYLLLVVIAGYSKQ
                     AFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDG
                     SLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLG
                     MLLITKYAIDLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIA
                     KEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRL
                     MDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKV
                     SPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLI
                     HGRHVTRNAMN"
     gene            complement(10734..11174)
                     /locus_tag="OY092_001417"
     CDS             complement(10734..11174)
                     /locus_tag="OY092_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HCX1076365.1"
                     /translation="MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKH
                     QPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEI
                     VCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND"
     gene            11337..12101
                     /locus_tag="OY092_001418"
     CDS             11337..12101
                     /locus_tag="OY092_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076366.1"
                     /translation="MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGY
                     INENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKN
                     KLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKK
                     LQKYIQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIE
                     DGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV"
     gene            complement(12093..12344)
                     /locus_tag="OY092_001419"
     CDS             complement(12093..12344)
                     /locus_tag="OY092_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076367.1"
                     /translation="MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILS
                     IFFILIKSSRLNNILTILSIVLAIIHMGILAHSTYVYLY"
     gene            12733..13998
                     /gene="femX"
                     /locus_tag="OY092_001420"
                     /gene_synonym="fmhB"
     CDS             12733..13998
                     /gene="femX"
                     /locus_tag="OY092_001420"
                     /gene_synonym="fmhB"
                     /EC_number="2.3.2.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II:glycine glycyltransferase"
                     /protein_id="HCX1076368.1"
                     /translation="MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIA
                     VGRDGEVQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKA
                     YAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL
                     NSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYD
                     ALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMETSEKQAKKAQNMIND
                     AQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNH
                     HMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVL
                     NQPLYQLIEQVKPRLTKAKIKISRKLKRK"
     gene            14115..17282
                     /locus_tag="OY092_001421"
     CDS             14115..17282
                     /locus_tag="OY092_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HCX1076369.1"
                     /translation="MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQN
                     PVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTD
                     MDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQ
                     LIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGL
                     FQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASP
                     QQNSKASSSNNISGVPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQ
                     VAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLR
                     NIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYR
                     RLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAI
                     AFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWI
                     VIILSTLILVVTIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKY
                     LKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKH
                     PGEWKNQDLGTGAGNKSVEVTVKGLSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTY
                     DQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWS
                     EDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAEVTNKDVGGTT
                     RQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLA
                     PFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQ
                     GMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISS
                     TLLTLVVVPVIYEILFTLKKRFTKR"
     gene            complement(17469..17786)
                     /gene="mspA"
                     /locus_tag="OY092_001422"
     CDS             complement(17469..17786)
                     /gene="mspA"
                     /locus_tag="OY092_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane stabilizing protein MspA"
                     /protein_id="HCX1076370.1"
                     /translation="MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLA
                     LTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTI
                     VLF"
     gene            complement(18031..18195)
                     /locus_tag="OY092_001423"
     CDS             complement(18031..18195)
                     /locus_tag="OY092_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076371.1"
                     /translation="MSLENQLAELKYDYVRLQGDLEKRESLDLDTSALVRQLKDIENE
                     IRNVRAQMQD"
     gene            18328..19236
                     /locus_tag="OY092_001424"
     CDS             18328..19236
                     /locus_tag="OY092_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HCX1076372.1"
                     /translation="MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSL
                     VIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGL
                     FAYPLIEVIWPKTGLIYFGMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQ
                     SVPLVTYIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPA
                     TIKYLCLHYGLALVGGLLVHVLLPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTL
                     SFIGMTTNLTIIISIIILYVYQAVFV"
BASE COUNT         7021 a         2710 c         3698 g         5994 t
ORIGIN      
        1 cttttcaaaa atattgttaa gtgtataatg aaaatgtaaa tatttaataa ttgggggtat
       61 ttcgtaatga aaatgaaacg ttttatagct attgtaatgg cattattttt agtattagct
      121 ggttgttcta attctaatga taatcaagac aacaaaaaag atgcaacaga caatggaaaa
      181 aaacaagaaa ttcaagttgc agcggcagca agtttaacag atgtaaccaa gaaattagct
      241 tcagaattta aaaaagagca taaaaatgct gatattaaat ttaactatgg tggatcaagg
      301 gcattaagaa aacaaattga atcaggcgca cctgttgacg tatttatgtc tgcaaatact
      361 aaagatgtag atgcattaaa agacaagaat aaagcacata atacatataa atatgcgaaa
      421 aatagtctag tactaattgg tgataaagat tcaaattaca cttcagtaaa agacttaaaa
      481 ggcaatgata aattagcatt aggtgaagtg aaaactgtac cagcaggaaa atatgcgaaa
      541 cagtatttag ataacaataa cttatttaaa gaagttgaaa gtaaaatcgt ttatgctaaa
      601 gatgtaaaac aagtattaaa ttatgttgaa aagggtaatg cgaaacaagg ttttgtatat
      661 aaaactgact tatataaaca aaacaaaaaa attgatactg taaaagtaat taaagaagta
      721 gaacttaaga aaccaatcac atacgaagct ggtgctacat cggatagtaa attagcaaaa
      781 gagtggatgg aattcttaaa atcagataaa gctaaagaaa tattaaaaga ataccacttt
      841 gcagcataag gagttgtaat ccatgcctga cttaacacct ttttggatat ccatacgagt
      901 tgctgtaatc agtacgatta ttgtaacggt tttaggtatt tttatatcta aatggttgta
      961 tcgtcgtaag ggttcgtggg ttaaagtatt ggaaagttta ttgatattac ctattgtttt
     1021 gccgccaacg gtattaggtt ttattctatt aatcatcttc tcgccaagag gaccaatcgg
     1081 tcaattcttt gcgaatgtac tacatttacc tgtagtgttc actttgacag gtgctgtgat
     1141 agcatctgtc attgttagtt ttccactaat gtatcaacat actgtgcaag gcttcagagg
     1201 tatagacacg aaaatgatta atacagctag aacaatggga gcaagtgaaa cgaaaatttt
     1261 cctcaaatta attttaccat tagctaaacg ctctatttta gcaggtataa tgatgagttt
     1321 tgctcgtgca ttaggtgagt ttggtgctac attaatggtt gcaggatata ttccaaataa
     1381 aacgaataca ctacctttag aaatatactt tttagtggaa caaggtagag aaaatgaagc
     1441 gtggttatgg gtattagtgc tagtcgcatt ctctattgtg gttatatcta caattaattt
     1501 attgaataaa gataaatata aggaggtcga ctagatgctt aaaatcaatg tgaaatatca
     1561 attaaagaac actttaattc gcatcaatat agatgatact gaaccaaaaa tttatgcagt
     1621 tcgtggtccg tctggcattg gtaaaactac tgttttaaat atgattgccg gattacgtaa
     1681 agcagatgaa gctattatcg aagtgaatgg gcaattgctt actgatacgg caaaaaacgt
     1741 gaatgttaaa attcaacaac gacgtattgg atatctgttt caagactacc aattgtttcc
     1801 taatatgacg gtctataaaa atattacttt tatggctgaa ccatctgaac acatcgatca
     1861 attaatccaa actttaaaca ttgatcattt gatgaaacaa tatcctatga cattgtcagg
     1921 tggagaggca caacgtgtag cacttgcacg tgcacttagc acgaaaccag atttaatttt
     1981 attagatgaa cctttttcta gtttggatga tactacaaaa gatgagagta ttacattagt
     2041 taaacgtatt ttcaacgaat ggcaaatacc aatcatattt gtgacacatt caaactatga
     2101 agcagaacaa atggctcatg aaattattac aattgggtaa tcatttattt gccattaaag
     2161 agtttagaac gtatttaaaa ttgtagaagt gaatgcttct atcagcattt taatgatgtt
     2221 ttaaactctt ttttaggggc agttttttga gagacattga cgcgcgtcat ataatgaaag
     2281 taatgataaa aagaaaggat aacttaatgt gagtcaagaa cgttattcaa ggcaaatttt
     2341 atttaaacaa ataggtgaaa taggtcaaag caaaataaat caaaaatgtg cgttgattat
     2401 tggtatgggc gcattaggta cacatgtggc cgaaggactt gttagagcag gcattgctaa
     2461 actaatcatt gttgatagag attatattga atttagtaat ttacaaagac aaacattgtt
     2521 tactgaagaa gatgctttga aaatgatgcc taaagtggtt gcagctaaaa agcatttgct
     2581 agcgttacgt agtgatgttg atattgatga ttatattgcc catgtggatt attatttttt
     2641 ggaaacacat ggacaggacg ttgacgttat tattgatgca accgataact ttgaaacacg
     2701 acaactgatt aatgattttg catataaaca tcgtatacct tggatttatg gtggtgttgt
     2761 acagagtaca tatacagaag ctgcatttat acctggtaaa acaccttgct ttaactgttt
     2821 ggtaccacaa ttgccagcat taaatttaac atgtgataca gtaggggtca ttcaacctgc
     2881 cgtgacgatg gcaacaagtt tacaattaag agatgcgatg aaagtattaa cggaacaacc
     2941 aattgacaca aaaataactt atggcgatat ttgggaaggt agtcattatt catttggttt
     3001 cagtaaaatg caacgttcag actgtacaac ttgtggagat gtaccaagtt atccgtattt
     3061 aaacaagaat gaacaacgtt atgcaacatt gtgtggtaga gacactgtac agtatgaaaa
     3121 tgcatcaatt acacacgaca ttcttgttca atttttaaaa caacatcaac taaattatcg
     3181 cagtaattcg tatatggtta tgtttgaatt taaaggacac cgcattgttg cttttaaagg
     3241 tggaaggttt ttaatacatg gcatgacacg cacatcagat gccacacatc taatgaattt
     3301 attgtttgga taaaaaaaga taagacaaaa ggagtgtaat attatgggcg aacatcaaaa
     3361 cgttaaattg aatcgtacag ttaaagcagc cgtactaacg gtatcagata ctagagacat
     3421 tgatacagat aaaggtggtc aatgcgtgcg ccaactatta caagcagatg acgttgaagt
     3481 gagtgacgca cattatacaa ttgtgaaaga tgaaaaagta gccatcacga cgcaggtaaa
     3541 gaagtggtta gaagaagata ttgatgtcat cattacgact ggtggaacag gtattgcaca
     3601 acgtgatgtg acgattgaag cagtaaaacc acttttaact aaagagatag aaggctttgg
     3661 ggaattgttt agatatttga gttatgttga agatgttggc acgcgtgcat tattgtctcg
     3721 tgctgtagca ggtacagtta ataataaatt gatattttcg attccaggat caacaggcgc
     3781 agttaaatta gcattagaaa agctcattaa accagaatta aatcatctga ttcatgagct
     3841 tacaaaataa tttattgatt tgattggcgt tgaaaatctc cagatttacc gccagacttg
     3901 ctttcaaggt aggtttcgcc aataatcata cctttatcaa ctgctttcgt catgtcgtaa
     3961 atggttaaag ccgttgctga tgcagcggtt aaagcttcca tttcaacacc ggttttgcca
     4021 gttgtagaga cagttgtttg aatgtttaaa gtataaaggg gtgcatttgt ttcatcccag
     4081 ctgaagtgaa catctatgcc agtcaatggc aatggatggc acatcggaat aattgttgat
     4141 gtatttttag cagccataat accagcgatt tgagcagtgt tcaatacatt gcctttggta
     4201 ttggtgttat tagaaatctg cttaaaaata gtttcattca cagtaatgct tgaatgagcg
     4261 acagcagttc tttttgtaat ttgtttgtct gatacatcga ccattttggc gtggccttgt
     4321 tgattaatat gagtaaactc agtcatttta cccctcctag tgcatctagt atatcatgaa
     4381 aaaataaaag ttttggagat gatttttaat ggtagtagaa aaaagaaacc caatcccagt
     4441 taaagaagca attcaacgta tcgttaatca gcagagttca atgccggcaa ttacggtagc
     4501 acttgaaaaa agtctaaatc atatcttagc agaagatatt gtagctactt atgatatacc
     4561 aaggtttgat aaatcacctt atgatggttt tgcaattcgc agtgttgatt cacaaggggc
     4621 aagtggtcag aatcgcattg agtttaaagt gattgatcat attggtgcag gttcagtttc
     4681 tgataaatta gttggggatc acgaagcggt gcgtattatg actggagcac aaatacctaa
     4741 tggcgcagat gctgttgtta tgtttgaaca aacgattgaa ctagaagata catttacaat
     4801 tcgtaaacca ttttcaaaaa atgaaaatat atctttaaaa ggtgaagaaa caacgacagg
     4861 cgatgttgtt ctaaaaaaag gacaagtaat taatccaggg gctattgcgg tccttgcaac
     4921 atatggctat gcagaggtta aagttattaa gcaaccgagc gtcgctgtta ttgcaacagg
     4981 aagcgaatta ttagatgtta atgatgtatt agaagatgga aaaattcgta actctaatgg
     5041 tccaatgatt cgtgccttag cagaaaaatt aggtcttgaa gttggtattt acaaaacaca
     5101 acaagatgat ttagatagtg gtatacaagt cgttaaagaa gctatggaaa aacatgatat
     5161 agttattaca acgggcggag tttctgtcgg agactttgac tatttacctg agatttataa
     5221 ggctgtaaag gcggaagtgt tatttaataa agtagcaatg cgtcctggta gcgtaacaac
     5281 ggttgcattt gcagatggaa aatatttgtt tggattatct ggaaatccat cagcttgttt
     5341 tacaggattt gaactatttg tgaaaccagc tgttaaacat atgtgtggcg cactagaagt
     5401 cttcccgcaa ataattaaag caacattaat ggaagatttt accaaggcaa acccattcac
     5461 acgatttata cgtgctaaag caacattaac aagtgctgga gctactgtag taccttcagg
     5521 attcaataaa tcaggtgcgg ttgtagcgat tgcacatgct aactgtatgg tcatgttacc
     5581 aggagggtca cgtggtttta aagcggggca tacagtagat attatattga ctgaatctga
     5641 cgctgctgaa gaggaacttc ttttatgatt ttacaaattg taggttacaa aaagtctggt
     5701 aagacaacat tgatgaggca tattgtctct ttcttaaagt cacatggtta tacagttgct
     5761 actattaaac atcatgggca tggtaagaaa gatattcaat tacaggattc agacgtcgat
     5821 cacatgaagc attttgaagc gggggcagat caaagtattg tacaaggttt tcaatatcag
     5881 caaactgtaa cacgtgtaga taatcaaaat cttactcaaa ttattgaaaa atctgttaca
     5941 attgacacca atatcgtatt agttgaaggc tttaaaaatg ctgattttga aaaagtcata
     6001 gtctatcgaa atgaagaaga gttgcaagta ttacaacaat tgtcgaatgt ttgttatagc
     6061 attaatgtta gggagcatga agattttaca gcatttgagc aatggttatt aaataaaatt
     6121 aaaaatgatt gtgatacaca attaacatag aggattgaaa tgaatgaaac aatttgaaat
     6181 cgtgacagaa ccgatacaaa cagaacaata tcgtgaattc actataaatg aatatcaagg
     6241 tgcagtagtt gtttttaccg gtcatgttcg cgaatggact aaaggcgtca aaacggaata
     6301 tttagaatat gaagcgtata ttccaatggc tgaaaagaaa ttggcacaaa ttggagatga
     6361 aataaatgaa aaatggcctg gaacgataac gagtattgtt catagaatag ggccattaca
     6421 aatttcagat atcgctgtat taattgcaat ttcttcaccg catcgtaaag atgcctatcg
     6481 agcaaatgaa tatgcaattg agcgtataaa agaaattgtt ccgatttgga aaaaagaaat
     6541 ttgggaagat ggttcaaaat ggcaagggca tcaaaaaggg aattatgaag aagcgaagag
     6601 ggaggaataa gagagatgaa ggtactttac ttcgcagaaa ttaaagatat attacaaaaa
     6661 gcacaggaag atattgtgct tgaacaagca ttgactgtac aacaatttga agatttattg
     6721 tttgaacgtt atccgcaaat caataataaa aagtttcaag ttgctgtaaa tgaggaattt
     6781 gtacaaaaat cagatttcat tcaacctaat gatactgttg cattaattcc accggttagt
     6841 ggaggttaag cgagcatgaa agcaataatt cttgcaggtg gtcattcagt acgatttggt
     6901 aagcccaaag cttttgcgga agtgaacggt gagacctttt atagtagagt aattaagaca
     6961 ttagaatcaa caaatatgtt caatgaaatt attattagta caaatgcgca attggcaacg
     7021 caatttcaat atccaaatgt tgttatagat gatgagaatc ataatgataa aggtccatta
     7081 gcaggaattt atacaatcat gaagcaacat cctgaagaag aattgttttt tgtcgtttct
     7141 gttgatacac caatgattac tggtaaagct gtaagcacgt tgtatcagtt tttagtttct
     7201 catcttattg aaaatcattt agatgtcgca gcttttaaag aagatggacg ttttattcca
     7261 acaattgcat tttatagtcc gaatgcatta ggcgctataa ctaaagcact acattctgat
     7321 aattacagtt ttaaaaatgt atatcatgaa ttatcaacgg attatttgga tgtcagggat
     7381 gtagatgcgc cctcatattg gtacaaaaat ataaattatc agcatgattt ggacgcttta
     7441 attcaaaaat tgtaagccgt taggaggtcc acaaatggta gaacaaataa aagataaact
     7501 aggacgtccc atccgtgact tacggttatc tgtgacagat cggtgtaact ttaggtgtga
     7561 ttattgcatg cctaaagagg tatttggaga tgatttcgta tttttaccta aaaatgaact
     7621 gttaacgttt gatgaaatgg ctagaatcgc taaggtatat gcagaattag gtgtaaaaaa
     7681 aatacgcatt acaggtggag aaccattgat gcgacgcgat ttagatgtac ttatagctaa
     7741 attaaatcaa atcgatggta ttgaagatat tggtttgact acaaatggtt tgttattaaa
     7801 aaagcatgga caaaagttat atgatgctgg gctacgcaga attaatgtca gtttggatgc
     7861 tattgatgat acgctatttc aatcaatcaa taatcgtaat attaaagcga ctacgatttt
     7921 agaacaaatt gattacgcga cgtctattgg tttgaatgta aaagtaaatg ttgttataca
     7981 aaaaggtatt aacgatgatc aaattatacc aatgcttgaa tattttaaag ataaacatat
     8041 agagattcga tttatagaat ttatggatgt tggtaatgat aatggatggg atttcagcaa
     8101 agttgtaact aaagatgaaa tgcttactat gatagagcag cactttgaaa tcgatcgtgt
     8161 agaaccaaaa tattttgggg aagtagcaaa atattatcgc cataaggata atggtgttca
     8221 atttggtttg attacaagtg tttcacaatc attttgttct acatgtacac gggcaaggct
     8281 gtcatcagat gggaagtttt acggatgttt atttgcaact gtcgatggat ttaacgttaa
     8341 agcgtttatt cgttctggcg tgaccgacga agagttaaaa gaacaattta aagctctatg
     8401 gcaaataaga gatgatcgat attcagatga gagaactgct caaacagttg acaatcgcca
     8461 acgtaaaaag ataaacatga attatattgg tggttaatgt gtaggaacca ctatatatta
     8521 tatcattaga gattctttaa tatttctgtc ttactcccta aaatacaata ttatttatta
     8581 aagtaaaaac ggtcatatct atgccagatt taatagaaat gatcgttttt aatgttttta
     8641 caaattggcg gggccccaac acagaagcag acgaaaagtc agcttacaat aatgtgcaag
     8701 ttggggaacg gggccccaac atagagaatt tcaaaaagaa attctacaga caatgcaggt
     8761 tggggaacaa cgaaataaat tttatgaaaa tatcatttct atcccactct taagaatcac
     8821 tacataataa atctttagtg gttctttaac attgatgtca caccccatgt cattgagttg
     8881 taatatatct tttttaggta taaatgttgt cgaataaaca acaagttgtc caaaatatat
     8941 aaatctaaac aagatatatc cagcaattta atatttgtaa tagataaaat gctaagtttg
     9001 atatataata aatttaagta attgtataat aatatgaatt acaaacatct aagaagaaac
     9061 ataggaggca tcatattatg agtaataaag ttcaacgttt tatagaagca gaaagggagt
     9121 taagtcagtt aaagcactgg ttaaaaacaa cacataagat ttcaattgaa gaatttgtag
     9181 tactttttaa agtgtatgaa gctgaaaaga ttagcggtaa agaattgagg gatacattac
     9241 attttgaaat gctatgggat acaagtaaaa tcgatttgat tatccgtaaa atctataaaa
     9301 aagagcttat ttctaaattg cgttctgaaa cggatgaaag acaagtattc tatttctata
     9361 gtacttctca aaagaaattg ttagataaaa ttactaaaga aatagaagtg ttaagcgtta
     9421 caaactaaaa acttaaaaag catgccaatc agtacatcat aattgcgtct tggggacaga
     9481 caaatgatga atagagattg gcatgctttt tatttttgaa tataaatatt tagttcatgg
     9541 catttctagt tacatgacgt ccatgaatta agaagtaaac aagcatagta atgattgcta
     9601 aagcggccat aaagccgaag atttcactat atgaaaacat atgagtaaat aacccaagga
     9661 atgatggacc gaagccgaca cctgcatcta gaccaacgta aaaagtagat gtcgcgatac
     9721 catatttaat cggaggtgag acttttatcg caatagattg cattgcagat gataaatttc
     9781 cataccctaa acctaggcaa gctccagcaa gtaatattaa ccagctttga tagcttgaaa
     9841 ttaagcacac aaatgaaagg aaaagcatga taaatgctgg gtagacaata atattttcat
     9901 ttttatcgtc catcaatcta ccagcaatag gtctagtaat taacgatgct atagcatagc
     9961 aaataaagaa atagcttgct gcagttacta ggtgtcgctc taaagcaaat gcttgtaaat
    10021 aagttaggat ggacgcatag gtaacgccaa ttaaaagcat aattacagca acaggaatgg
    10081 cctcttttgc aataaattga tgaatactaa atcttggttt atcaatgaca ttagtttcag
    10141 ttttattatt tgttacttca aaatcaactt ttataaataa tgagataatg agtccgagta
    10201 tgcctaatat gacacaaata ataaacagta aatcaattgc gtattttgta ataagtaaca
    10261 tgcctagaaa tgggccaatc gctgtaccta atactaaact taaagaaaat aaactgatgc
    10321 cttcactttt tctattaaca ggggtaacgt atgccgcaat agtacctgtt gcagttgtca
    10381 caactgcagt tgcgataccg tttatgagac gtacaaagat taaaaaagct aaagatccat
    10441 caataaaata aagtaattgc gtgataatta aagcaattaa accaataaat aataatcgtt
    10501 taggtccgat ttgatttaca aatttacctg tagcaaatcg accaattaaa gacccgacaa
    10561 taaatagtcc tacaactaat ccggctaatg aatcggaagc gtcgaaagct tgcttactat
    10621 agccagcaat aactacaagt aacaaataca tgcataggta tacgataaag ttgacaaaaa
    10681 agttgattgt aaaacttttg gtgaaaatag gtgatttatt taatgagcct tgattagtca
    10741 ttgtgtgcct cctttaataa tatttcatga atttgattca tcacatttat ggtttcttgc
    10801 atttgatctt gcgaaatgtt tgttttggca actactgctt gttggagctt ttgtacatca
    10861 agacaaacaa tctcatataa ttcatgccct ttaggtgtta aagttaaaaa cttttgtcgt
    10921 ttatcctcta aactgttttc tactgttata aggtcatttt ctattagagc ttttaaagtt
    10981 tttcttgcag taggcttttc aattgcacgt ctatgtgaaa tttcaatgag agtagtgggc
    11041 tgatgtttag cgatatcgcg taagattaac cattggccat aatatatatt gtgtttttct
    11101 aaaatcggct cggctaattt taaatagggg cgatatattg ttataaaact attgaaaaat
    11161 tcttgtgata gcatagtgac atctcctaag ataaaatagt tagcttagct aacctttttt
    11221 acaacaatag taattataaa acgggagcaa ttagaaatca atatataatt attaagagca
    11281 aaaataatta tactttgtta aaataagcgt aattacatgt aaataggggg atactaatga
    11341 tattgaaatt tgatcacatc attcattata tagatcagtt agatcggttt agttttccag
    11401 gagatgttat aaaattacat tcaggtgggt atcatcataa atatggaaca ttcaataaat
    11461 taggttatat caatgaaaat tatattgagc tactagatgt agaaaataat gaaaagttga
    11521 aaaagatggc aaaaacgata gaaggtggag tcgcttttgc tactcaaatt gttcaagaga
    11581 agtatgagca aggctttaaa aatatttgtt tgcgtacaaa tgatatagag gcagttaaaa
    11641 ataaactaca aagtgagcag gttgaagtag tagggccgat tcaaatggaa agagatacac
    11701 ataaagatgg taaggtaaag tggcaattgc tttatataat gaatcaggat gatgatgaaa
    11761 ttaagccacc attttttatt caatgggaag aaagtgattc catgcgtact aaaaaattgc
    11821 aaaaatatat tcaaaaacaa ttttcaattg aaactgttat tgtgaaaagt aaaaaccgat
    11881 cacaaacagt atcgaattgg ttgaaatggt ttgatatgga cattgtagaa gagaatgacc
    11941 attacacaga tttgatttta aaaaatgatg atatttattt tagaattgaa gatggtaaag
    12001 tttcaaaata tcattcggtt atcataaaag acgcacaagc aacttcacca tattcaattt
    12061 ttatcagagg tgctatttat cgctttgaac cattagtata aatatacgta agtgctatga
    12121 gcgagaatgc ccatatgaat aatggcaagc acaatggaaa gaatcgttaa tatattattt
    12181 aatcgtgatg acttaattaa aatgaaaaag attgataata taaatgtgaa aaagataagt
    12241 ataacccgta aactaaagta attcacggtg agaggttgac tcaatgtcat aatgattgca
    12301 acgatgttca taattataaa tagacttaaa ataattgttc tcatatcaaa cacctcattg
    12361 ttagattatt gacattataa caggggtatt tgtatatgaa cattaatgtg gttgcttgag
    12421 gaaaaattta ttcattgaag tcaagttggt tcattttaga aatgaatatc gtgttagatg
    12481 atgaaagtat attgaagtat aggtaactag ttgaaaagta ttaattgtac gataacatta
    12541 aatttaacac gaaacataga tataaaatga tttacaatta aaatgggtaa atttgaactt
    12601 gctaaactat taattggagc atggacattt caaaaataag agttcaaatc ttacacaagc
    12661 tctgaatcga cactataaga tacaaactgt ataattaaag gtattgttaa atagaaggag
    12721 atatcataaa tcatggaaaa gatgcatatc actaatcagg aacatgacgc atttgttaaa
    12781 tctcacccaa atggagattt attacaatta acgaaatggg cagaaacaaa gaaattaact
    12841 ggatggtacg cgcgaagaat cgctgtaggt cgtgacggtg aagttcaggg tgttgcgcaa
    12901 ttacttttta aaaaagtacc taaattacct tatacgctat gttatatttc acgtggtttt
    12961 gttgttgatt atagtaataa agaggcgtta aatgcattgt tagacagtgc aaaagaaatt
    13021 gctaaagctg agaaagcgta tgcaattaaa atcgatcctg atgttgaagt tgataaaggt
    13081 acagatgctt tgcaaaattt gaaagcgctt ggttttaaac ataaaggatt taaagaaggt
    13141 ttatcaaaag actacatcca accacgtatg actatgatta caccaattga taaaaatgat
    13201 gatgagttat taaatagttt tgaacgccga aatcgttcaa aagtgcgctt ggctttaaag
    13261 cgaggtacga cagtggaacg atctgataga gaaggtttaa aaacatttgc tgaattaatg
    13321 aaaatcactg gggaacgcga tggcttctta acgcgtgata ttagttactt tgaaaatatt
    13381 tatgatgcgt tgcatgaaga tggagatgct gaactatttt tagtaaagtt ggacccaaaa
    13441 gaaaatatag cgaaagtaaa tcaagaattg aatgaacttc atgccgaaat agctaaatgg
    13501 cagcagaaga tggaaacatc tgaaaagcaa gctaaaaaag cgcaaaatat gattaatgat
    13561 gcgcaaaata aaattgctaa aaatgaagat ttaaaacgag acctagaagc tttagaaaag
    13621 gaacatcctg aaggtattta tctttctggt gcactattaa tgtttgctgg ctcaaaatca
    13681 tattacttat atggtgcgtc ttctaatgaa tttagagatt ttttaccaaa tcaccatatg
    13741 cagtatacga tgatgaagta tgcacgtgaa catggtgcaa caacttacga tttcggtggt
    13801 acagataatg atccagataa agactcagaa cattatggct tatgggcatt taaaaaagtg
    13861 tggggtacat acttaagtga aaagattggt gaatttgatt atgtattgaa tcagccattg
    13921 taccaattaa ttgagcaagt taaacctcgt ttaacaaaag ctaaaattaa aatatctcgt
    13981 aaattaaaac gaaaatagat taaagactga aatctgaacg ctcataagac tgtcatttgc
    14041 gttcagattt ttttacacaa tatagaatgg ttgagtaaaa tatttttgaa tatagtgaaa
    14101 gagggggaag tactgtgata aaaaagctat tacaattttc tttggggaat aagtttgcta
    14161 tctttttaat ggttgtttta gttgtcttgg gcggtgtata cgcgagtgct aaattgaaat
    14221 tagaattact accaaatgta caaaatccag ttatttcagt tacaacaaca atgccgggtg
    14281 caacgccaca aagtacccaa gatgaaataa gtagtaaaat tgacaaccaa gtaagatcgt
    14341 tggcatatgt gaaaaatgtt aaaacgcaat ccatacaaaa tgcttcaatt gtaacagttg
    14401 aatatgaaaa taatacagat atggataaag cagaagaaca gcttaaaaaa gaaatcgata
    14461 aaattaaatt taaagatgaa gttggtcaac cagaattaag acgtaattcg atggacgctt
    14521 ttccggtttt agcatattca ttttcaaata aagagaatga cttgaaaaaa gtaacgaaag
    14581 tactgaatga acaattaata ccaaaattac aaacggtaga tggtgtgcaa aatgcgcaat
    14641 taaacgggca gacgaaccgt gaaatcaccc ttaaatttaa gcaaaatgaa cttgaaaaat
    14701 atgggttgac tgctgatgat gtagaaaact atctaaaaac ggcaacaaga acaacaccac
    14761 ttggattgtt ccaatttggt gataaagata aatcaattgt tgttgatggt caatatcaat
    14821 ctgttgatgc ttttaaaaac ataaatattc cattaacgtt ggcaggagga caagggcaat
    14881 ctcaatctca aagtgacaat aaacaaaatt cagccatgtc agacgttaat caggcatcac
    14941 cacagcaaaa ttcaaaagcg tcatcatcaa ataatataag tggtgtgccg acagcgaaac
    15001 taggagattt agctgatatt acagttggtg atgtgcgtac ttctatttct aaaacgaatg
    15061 gcaaggatgc ggttaattta caaataacta aagctcaaga tgccaataca gttcaagtag
    15121 ccaaagatgt acaacgtaaa attgatacat tcgttgatga aaataaagat tttaatgtca
    15181 caaaaacaat ggatactgca aagcctgttg agaaatcact ttatacgatg gttgaaaaag
    15241 catcattagg tacaatcgtg gcaattatag ttattttgct gtttttaaga aacattcgta
    15301 cgacggcaat ttctattata tccattccgt tatcacttct tatggcgctt attgctctga
    15361 aattgagtga tgtttcattg aatatactaa cgttaggtgc attaacagta gcgattggac
    15421 gtgtgataga cgattcgatt gtagttgttg aaaatattta tcgacgctta acagattcag
    15481 aagaacaact aaaaggtgaa aatttaatta tcagtgcgac aactgaagta tttaaaccaa
    15541 taatgtcatc gacactagtt actattatcg tcttcttacc acttgtgttt gtatcaggtt
    15601 cagtaggcga aatgtttaga ccttttgcat tggctattgc atttagttta ttagcatcgt
    15661 tattagtgtc aattacactc gttccagcgt tggcagcaac actatttaaa aaaggcgtta
    15721 aacgtcgtaa taaacaacat caagaaggat taggtgttgt tagtacaact tataaaaaag
    15781 tattgcattg gtcactaaat cataagtgga ttgtaattat attaagtaca ttaattttgg
    15841 ttgtaactat tgtatttgga ggaccgagac taggcactag ctttatttca gcaggtgacg
    15901 ataaattttt agctattact tatacaccga agcctggtga aacggagcaa gcagtgttga
    15961 atcatgcgaa agatgttgaa aaatatttaa aacagaaaaa gcatgtaaaa acaattcaat
    16021 actcagttgg tggtagtagt ccagtagatc caacgggtag tacaaatagt atggcaatca
    16081 tggttgaata tgataatgac acgcctaatt ttgatgtaga agcggataag gttattaaac
    16141 atgcagatgg ctttaaacat cctggagagt ggaaaaatca agatttagga acaggtgcag
    16201 gtaataaatc tgtagaggtt actgtgaaag gcctatcaat ggatgccata aaatcaactg
    16261 taaaagatat tgaacagaaa atgaaacagg ttaaaggact agccaatgtc aaatctgatt
    16321 tatcgcaaac atatgatcag tatgaaatta aagttgatca aaataaagcg gcagaaaatg
    16381 gtatttctgc aagtcaactt gcaatgcact tgaatgaaaa cttaccagaa aaaacagtta
    16441 cgactgttaa agaaaatggt aaaactgttg atgttaaagt caaacaaaat aagcaaacag
    16501 actggtcaga agataagttg aataatataa ctttgaaaaa gccgactggt ggcacgatta
    16561 aattgggaga tatcgctacg ttagttaaaa caacgacacc aagtaaattg acgcaagaac
    16621 aaggtgatta tgcaacgacg gtatctgctg aagtaacaaa taaagatgtg ggtggcacaa
    16681 cacgacaagt gatgtctaaa ataaataatt tggacaaacc gaataatgta aaggttaata
    16741 tcggtggtgc atcagatgat attaacaatg caatgacaca attagccttt gcaatgttag
    16801 ctgcgatcat tatcgtatat ttaatcctag ttattacatt taaaggtggc ttagcaccat
    16861 ttacaattct attctcttta ccatttacag ttatcggtgt aattattgca ctattaatca
    16921 caggagaaac aatatcagta ccaagtttaa ttggtatgct aatgttaatt ggaatcgtag
    16981 taacaaatgc cattgtgtta atagaccgtg tcattaataa tgagcagcag ggcatggaga
    17041 tgaaagaagc attaatcgaa gcaggcggta ctagaattag accgatatta atgacggcga
    17101 ttgcaacaat tggtgcatta gttcctttgt tatttggtca agatagctcg attcttattt
    17161 cgaaaggatt agctgctaca gttattggtg gtttaatttc atcaacttta ttaacacttg
    17221 tagttgtacc agtaatatat gaaattctct ttactttaaa aaaacgattc actaaacgat
    17281 agataatata aaagccataa aagcggtcat ggtattgact acttttatgg ctttttaaaa
    17341 tttgaaattt tagaccttat ttcacgtgcg atttaatcga tgtgttaata aaacaatact
    17401 ggcattcaac atgtaatccg ataataaaat aagattgcaa ttatgttatt gcatgttttg
    17461 tttattactt agaataatac gatggttaag atgaaatata tgacaaagat aaataatgac
    17521 attaaattca agatgtttac gccttttaga tcttttttaa gcattttaaa tcctgtcact
    17581 tcgacattac cgactaagag taataagacg ataaataccc accaattctc ttttggaaaa
    17641 ctcatcgtcg ttaatgctaa gacgaataat aacaacacac ccataataat tctcaaaatg
    17701 cgagtaaata caacttccat tttaaaaata ctaataaaac taacaattag ataaagtatt
    17761 gctagtaaaa tcagataaaa ttgcatatga taacttcctc tccgtttcaa agggttcatg
    17821 tagtacagca gcgtagaaaa cataaatagc agtgttggga tagatatgcg cgtatgttat
    17881 taatgagaca ctaaatcata acacgacaac accttgtgat tctagatgta attgagcgaa
    17941 aaataaagca attcatcaat ataacgtatt cagagcaatg ctagtcaaat ttatgtaact
    18001 aaaagtattt attgcctgaa tgatagatta ttaatcttgc atttgagcac gaacatttct
    18061 aatttcattt tcaatatctt taagttgacg aacaagtgcg gaagtatcta aatccaaaga
    18121 ttcccgtttt tctaagtcgc cttgaagacg aacgtaatca tatttaagtt cggctagttg
    18181 gttttctaaa gacatactat aacactcctt tgaaatataa ttaagtgcat ttaatgtaga
    18241 ttatagcatg aaacagtaga cttctaaaat atctgtggag tatgttaaag ttataaatta
    18301 tgaagattat tgaaagaagg gataacagtg acagaacaat ttactatgat tattttatta
    18361 attgcgcttg gttacttttt gaagcgcatt aattttataa aggcaactga tagccaagtc
    18421 attgctacat tagttcttaa tgtcacactc ccatctttag ttattgtgaa tttaaacagt
    18481 gcagaattaa aattgtcatt ctccatttta ccaattttaa tgattatcta tggtattgtg
    18541 gcgaaaatga ttgctgtctg gttttttaga aaatatgata atcacatgcg tggatcagta
    18601 ggtatgatga ctggtgctat gaatattgga ttgtttgcat atccactaat tgaagtgata
    18661 tggcctaaaa cggggcttat ttattttggt atggctgata taggtggtgc ctttgtgatg
    18721 tttggaatta cttactttgt aggtagctat tttagtgaag gtagtgatca attcgatttt
    18781 aaatatttag gtaagaaatt attacaatca gtgccactcg ttacatacat tgtaatgttt
    18841 atattgaata taagtcacat ccatttacca catgtggcaa tcgatttctt tagcatactt
    18901 tcccatgcaa atatgccgtt atcaatgatt ttgctaggtg tcatgttgaa ttttactctg
    18961 gaaagaaagt atatacctgc tactattaaa tatttatgtt tgcattatgg attagcatta
    19021 gttgggggat tgttagtaca tgtgttgtta ccggtatcag atgatatgat taagacgacg
    19081 ttgttggtca cttggatgtt cccagttggt gtcgcaatta tttcttatgg tattcagttt
    19141 aaatatcgaa cactgtcatt tataggtatg acgaccaatt tgacaatcat tattagtatc
    19201 attattttgt acgtgtatca ggcagtgttt gtctagttta cacatttgaa aataaaatcc
    19261 attttaatag tcgaagaaaa tgagagcccc ctttaccaca acatgtaaat gtatattgtg
    19321 aaaagggggc ttttatttat gacatagttg ttcaacaggc tgggacataa atcaatattc
    19381 tatgctctac gaagttatat tggcagtagt tgactgaatg aaa
//
LOCUS       DAKPJH010000049        19421 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.049, whole genome shotgun sequence.
ACCESSION   DAKPJH010000049 DAKPJH010000000
VERSION     DAKPJH010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19421
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.049"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            2..538
                     /gene="amaP"
                     /locus_tag="OY092_001425"
     CDS             2..538
                     /gene="amaP"
                     /locus_tag="OY092_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline shock response membrane anchor protein
                     AmaP"
                     /protein_id="HCX1076373.1"
                     /translation="MKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQ
                     PLLISLAALLILIGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKY
                     DQVRQPNVVAKLYNKKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPV
                     RKLEVNVRDQKTSGPRVL"
     gene            551..790
                     /locus_tag="OY092_001426"
     CDS             551..790
                     /locus_tag="OY092_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2273 domain-containing protein"
                     /protein_id="HCX1076374.1"
                     /translation="MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLG
                     FWKTILIIVLCLIGVGIGYMKDRKQDFMNFLNRWS"
     gene            853..1362
                     /locus_tag="OY092_001427"
     CDS             853..1362
                     /locus_tag="OY092_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HCX1076375.1"
                     /translation="MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTF
                     SDEVVEKIAGIAAREVKGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLK
                     VILEYGESAPKIFRKVTELVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNEN
                     NNQERQGLQ"
     gene            complement(1523..3499)
                     /gene="sfaD"
                     /locus_tag="OY092_001428"
                     /gene_synonym="sfnaD"
     CDS             complement(1523..3499)
                     /gene="sfaD"
                     /locus_tag="OY092_001428"
                     /gene_synonym="sfnaD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ornithine--citrate ligase SfaD"
                     /protein_id="HCX1076376.1"
                     /translation="MNLNLIFKEQTLKFNKEEQETYLFLQQHNNDWANIFKEMILQGR
                     DKVTQRLVTSMHRENLVKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPIT
                     GEHAFDRIDVEGPFYIKDDITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLIN
                     SATNMTFAISYQALSMQHDSTPLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLN
                     ALQTFLYSSEFNQPIKLKIVLIHSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPK
                     FNFNDYHIMIVHPWQLDDVLHSDYQAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAM
                     SPHIKLSTNVHITGEIRTLSEQTTHNGPLMTRILNDILEKDVIFKSYASTIIDEVAGI
                     HFYNEQDEADYQTERSEQLGTLFRKNIYQMIPQEVTPMIPSSLVATYPFNNESPVVTL
                     IKRYQSAASLSDFESSAKSWIETYSKALLGLVIPLVTKYGIALEAHLQNAIATFRKDG
                     LLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHEKSRILTDSKTSVFNKAFYSTVQNHLG
                     ELILTISKASNDSNLERHMWYIVRDVLDNIFDQLVLSTHKSNQVNENRINEIKDTMFA
                     PFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN"
     gene            3601..4794
                     /gene="sfaA"
                     /locus_tag="OY092_001429"
     CDS             3601..4794
                     /gene="sfaA"
                     /locus_tag="OY092_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A export MFS transporter"
                     /protein_id="HCX1076377.1"
                     /translation="MTKYFFSSSFLLFLGNWIGQIGLNWFVLTTYHNAVYLGIVNFCR
                     LVPILLLSVWAGAIADKYDKGRLLRITISSSFLVTAILCVLTYSFTAIPISIIIIYAT
                     LRGILSAVETPLRQAILPDLSDKISTTQAVSFHSFIINICRSIGPAIAGVILAVYHAP
                     TTFLAQAICYFIAVLLCLPLHFKVTKMPEDATRYMPLKVIIDYFKLHMEGRQIFITSL
                     LIMATGFSYTTLLPVLTNKVFPGKSEIFGIAMTMCAIGGIIATLVLPKVLKYIGMVNM
                     YYLSSFLFGIALLGVVFHNIVIMFICITLIGLFSQWARTTNRVYFQNNVKDYERGKVL
                     SIIMMDRGMIPLGSLLMSICADVFGIVRTFSIMGISTICITMVFYFINRKLKLKLEES
                     NHGIS"
     gene            4781..6538
                     /gene="sfaB"
                     /locus_tag="OY092_001430"
     CDS             4781..6538
                     /gene="sfaB"
                     /locus_tag="OY092_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A synthetase SfaB"
                     /protein_id="HCX1076378.1"
                     /translation="MVYLEWAKADRNIQYRVINAIIKERIYPEQTFISQKGSLIEIQY
                     HMHVLTIEVVRKSALERYEFTGDITYLNKGETSLIITLEGLLDVLNHDFDIPISERLR
                     EELIHSRDSLVETYKQMSHRQTLISQSFKFSRLPQDINFFSWLQHVKDSDKTDDLTYS
                     ESLVPEGHPTHPLTKTKLPLTMEEVRAYAPEFEKEIPLQIMMIEKDHVVCTAMDGNDQ
                     FIIDEIIPEYYNQIRVFLKSLGLKNEDYRAILVHPWQYDHTIGKYFEAWIAKKILIPT
                     PFTILSKATLSFRTMSLIDKPYHVKLPVDVQATSAVRTVSTVTTVDGPKLSYALQNML
                     NQYPGFKVAMEPFGEYANVDKDMARQLACIIRQKPEIDGKGATVVSASLVNKNPIDQK
                     VIVDSYLEWLNQGITKESITTFIERYSQALIPPLIAFIQNYGIALEAHMQNTVVNLGP
                     HFDIQFLVRDLGGSRIDLETLQHRVSDIKITNDSLIADSIDAVIAKFQHAVIQNQMAE
                     LIHHFNQYDCVEETELFNIVQQVVAHAINPTLPHANELKDILFGPTITVKALLNMRME
                     NKVKQYLNIELDNPIKKEV"
     gene            6545..7615
                     /gene="sfaC"
                     /locus_tag="OY092_001431"
     CDS             6545..7615
                     /gene="sfaC"
                     /locus_tag="OY092_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A biosynthesis protein SfaC"
                     /protein_id="HCX1076379.1"
                     /translation="MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVE
                     SLKALGINHVAESRLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIH
                     QINEVAEVLGKKHKILLMIDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCF
                     KSDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGET
                     LFRGVDTTTNQAIAMLYQDAITLEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDN
                     ISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALSHSMYMKNLHKVYID
                     DSKIDTLLQNFDVKSPAMVNQY"
     gene            complement(7716..7841)
                     /locus_tag="OY092_001432"
     CDS             complement(7716..7841)
                     /locus_tag="OY092_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076380.1"
                     /translation="MYHGYIIFALMQLTPFSMTVIPVIQLILSVAILCDELLHFI"
     gene            8008..8991
                     /locus_tag="OY092_001433"
     CDS             8008..8991
                     /locus_tag="OY092_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCX1076381.1"
                     /translation="MRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDE
                     NGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVG
                     TRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNIDAFKTI
                     AKALDKEKEGEKRLAEHDKLINKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQF
                     LNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKK
                     LQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQK"
     gene            9003..10034
                     /locus_tag="OY092_001434"
     CDS             9003..10034
                     /locus_tag="OY092_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HCX1076382.1"
                     /translation="MAIKEISSQSAIDHKRKRRTTLTYIVSLCFLFICIYLNMAIGSS
                     KINFSDIVHYVTGHTDTKATFLLHNVRMPRMIAGLFIGGALAVSGLLMQAMTRNPLAS
                     PKIFGVSSGASFVIVLVTIIIPSLEYYALYLGVIGAFIGGLTVYTLSGATKGMTPIKL
                     ALAGMAIHLFFSSMTEGIIILNENSNEQVMFWLVGSLSSMKWDEILTILPWLIGALIA
                     TVFIGRQLTIMELGDDIAKGLGQNINKVRIIIGLLVIILTGMSVSVAGPIGFVGLIVP
                     HIVKRYVSKNYLVMIPLTFIIGADLLLLSDVLSRLITYPYESPVGIVTSFVGALYFLF
                     ITIKGVKRI"
     gene            10031..10999
                     /locus_tag="OY092_001435"
     CDS             10031..10999
                     /locus_tag="OY092_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HCX1076383.1"
                     /translation="MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFAQ
                     DDFILNEYRIPRTLLGIIIGSSLAISGAIIQAVIRNPLASPDVIGISKGASLAAVIII
                     MIFPTAPLFVLPIGSFLGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
                     LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVA
                     TALGLKVKTIKMLLLILAVILAGSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMS
                     GLIGAILLTFGDGLARGIHPPLDIPVGVIIAIIGAPYFLILLRRMK"
     gene            11235..12605
                     /locus_tag="OY092_001436"
     CDS             11235..12605
                     /locus_tag="OY092_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HCX1076384.1"
                     /translation="MDSFSRKEIVIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLP
                     VAFLAGVLKDVLGGVMPFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGW
                     LILRLLAVVFAWMTFLRIGSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYG
                     LLEMLGPIFRPVMRPLFTLPGRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATV
                     ISTTFSVVSITFAIVVAETVHMQNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYA
                     KEVPESARTEALPEGKTALRHGFDTATEVGIKAPGVVDFFKSGLKTVVDMWFVILPVV
                     MSIGTIATIIANYTPFFVILGKPFVPFLELMQIPEAAQASQTIIIGFADMFLPSILIE
                     GVQNDITRFVIGALSISQLIYLSEVGGVILGSKIPVSIGKLFMIFLIRTIITLPIISL
                     MAHLLL"
     gene            complement(12737..12997)
                     /locus_tag="OY092_001437"
     CDS             complement(12737..12997)
                     /locus_tag="OY092_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076385.1"
                     /translation="MAMTVKKDNNEVRIQWRVADIKIPTSEIKNITQDQDIHAVPKLD
                     SKDVSRIGSTFGKTNRVIIDTEDHEYIIYTQNDQKVYNELTK"
     gene            13174..13689
                     /locus_tag="OY092_001438"
     CDS             13174..13689
                     /locus_tag="OY092_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCX1076386.1"
                     /translation="MTGKTHASCGMLVGALTTQYFQTDIFSSVTVIILATLASLLPDI
                     CHTQSKIGRRFKVISFFVRLIFGHRTFTHSILFIAIIAFLLQIIQTPNYYMAAIIIGL
                     VSHVILDMITPKGVKLFYPLPFNVKTPIQFKTGGLVDLSLATALMVGTVYVLFQPFIN
                     DIISNWNTKFL"
     gene            13733..14920
                     /locus_tag="OY092_001439"
     CDS             13733..14920
                     /locus_tag="OY092_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDPGP type 1 family protein"
                     /protein_id="HCX1076387.1"
                     /translation="MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAK
                     LYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEGQGLQAIKEGQFAVLLMAGG
                     QGTRLGYKGPKGSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINHEETLAYF
                     EAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYL
                     EEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPKPGESVGRLVNV
                     DCKDTVLEYSELDPEVANQFNNANIGIHAFKLGFILNAVNRELPYHLAIKNLKQLDEN
                     FGVIEQPTLKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNTEGKDSVATATEDLRRM
                     GLI"
     gene            14939..15622
                     /locus_tag="OY092_001440"
     CDS             14939..15622
                     /locus_tag="OY092_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HCX1076388.1"
                     /translation="MSKSSEKSNDTIAETFKDIIPLSFGEEIGNAASHGLAALLTLLV
                     LPYAAVHSYIANGTLASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMI
                     YVAISGTYTPILLTVVGGWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMG
                     WVGIILLPIIFIRTSWIFILFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLL
                     HLIAILYFM"
     gene            15902..17245
                     /locus_tag="OY092_001441"
     CDS             15902..17245
                     /locus_tag="OY092_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076389.1"
                     /translation="MRLKSIVTVIALILIMFMAAIESSIISLALPTIKQDLNAGNLIS
                     LIFTAYFIALVIANPIVGELLTRFKIIYIAIAGLTLFTVGSLMSGLSTHFSMLIISRV
                     IQGFGSGVMMSLSQIVPKLAFEIPLRYKIMGIVGSVWGISSIIGPLLGGGILEFATWH
                     WLFFINIPIAIIAIILVVWTFHFSEEETVAKSKFDTKGITLFYIFIGLIMFALLNQQH
                     LYLNIIGFVLAILIALRLFNVEKKVSSPFLPVAEFNRMITLVFITDLLTAVCLMGFNL
                     YIPVYLQEQLGLSPLQSGLVIFPLSVAWITLNFNLHHIEAKLSRKVIYLSSFTLLLLS
                     SIIIAFGIKLPILIACVLILSGISFGYIYTKDSVIVQEETSPIQMKKMMSFYGLTKNL
                     GASIGSTIMGYLYALKSGLFGANLHNILGVVSLISVGLIVVWLIFYREAASQTNE"
     gene            17367..17840
                     /gene="sepA"
                     /locus_tag="OY092_001442"
     CDS             17367..17840
                     /gene="sepA"
                     /locus_tag="OY092_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter SepA"
                     /protein_id="HCX1076390.1"
                     /translation="MVMNYLKHKFYNLLTTIIVLFIFVLSGAIFLTFLGFGLYGLSRI
                     LIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATF
                     HLISYMVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK"
     gene            18029..>19421
                     /gene="lmrS"
                     /locus_tag="OY092_001443"
     CDS             18029..>19421
                     /gene="lmrS"
                     /locus_tag="OY092_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter LmrS"
                     /protein_id="HCX1076391.1"
                     /translation="MANVELTTRRRNFIVAVMLISAFVAILNQTLLNTALPSIMRELN
                     INESTSQWLVTGFMLVNGVMIPLTAYLMDRIKTRPLYLAAMGTFLLGSIVAALAPNFG
                     VLMLARVIQAMGAGVLMPLMQFTLFTLFSKEYRGFAMGLAGLVIQFAPAIGPTVTGLI
                     IDQASWRVPFIIIVGIALVAFIFGLISISSYNEVKYTKLDKRSVMYSTIGFGLMLYAF
                     SSAGDLGFTSPIVIGALIISMVIIYLFIRRQFNISNALLNLRVFKNRTFALCTISSMI
                     IMMSMVGPALLIPLYVQNSLSLSALLSGLVIMPGAIINGIMSVFTGKFYDKYGPRPLI
                     YTGFTILTITTIMLCFLHTDTSYTYLIVVYAIRMFSVSLLMMPINTTGINSLRNEEIS
                     HGTAIMNFGRVMAGSLGTALMVTLMSFGAKIFSSTSPSHLTATEIKQQSIAIGVDISF
                     AFVAVLVMAAYVIA"
BASE COUNT         6440 a         2666 c         3525 g         6790 t
ORIGIN      
        1 ggtgaaacga cttaaaaact ttatccttgg cttattaata gtagtaatcg tggggttcct
       61 gttattcatg tatatccaag atggacgtat aactgaatat caagactact tccttcaatt
      121 tgaatggttc caaccattac ttatttcact tgctgcacta ttgatattaa taggtcttat
      181 attagtattt agtatcttca aacctacgca tcgaaaacct ggattataca aagacttcga
      241 tgatggtcat gtttacgtat ctcgtaaagc tgttgaaaag acggcattcg atacggttgc
      301 aaaatatgat caagtaagac aaccaaatgt agttgcaaaa ctatataaca aaaaaaataa
      361 atcttatatc gacattaaaa ctgacttttt cgtaccaaat aatgttcaag ttcaatcttt
      421 aactgaagca attcgttcag atattaaaaa gaatgtagaa tatttcacag aaatgccagt
      481 acgtaagtta gaagttaatg tgagagatca gaaaacttct ggtccacgag tgttgtaagg
      541 gaggtatatc atggctaaca atcataacca aaacggacaa gactctacac aacaagtgat
      601 taatttttta aaagtattta aatggagaat cgttggtttc ttagcgtttc tattaatcgc
      661 gatattattc ttaacgttag gtttttggaa aacaatactt atcatcgttt tatgtttaat
      721 tggtgtaggt attgggtata tgaaagaccg taagcaagat tttatgaatt ttttaaatcg
      781 atggagttaa ttcatcaatt tagaatttaa ttaaaaaaat ataaaaaaca ataagttaaa
      841 ggagaatcta ttatgactgt agataacaat aaagcaaaac aagcatacga caatcaaact
      901 ggtgttaacg aaaaagaaag agaagagcgt caaaaacaac aagaacaaaa tcaagaacct
      961 caattcaaaa ataaattaac tttctctgat gaagttgttg aaaaaattgc tggtatcgct
     1021 gcacgtgaag ttaaaggtat cttagacatg aaaggtggct taactgatac attcactaat
     1081 gcattctcaa gtggcaacaa cgttacacaa ggtgtatctg ttgaagttgg tgaaaaacaa
     1141 gctgctgtag acttaaaagt aattttagaa tatggtgaat cagcacctaa aattttccgt
     1201 aaagtaactg aattagtaaa agaacaagtt aaatatatta ctggtttaga tgttgttgaa
     1261 gttaacatgc aagttgacga tgtaatgact caaaaagaat ggaaacaaaa acacgaaaaa
     1321 aataatgaaa acaataacca agaaagacaa ggtttacaat aagttattcg ataaaaaagc
     1381 tcggcacacc attttagtgc cgagcttttt tgtgattttt aataatttga atatgagaaa
     1441 tgtatctttc tctcatttgt ttagattgta tttaataagt taatgtaatc cttgagctca
     1501 cgattaataa aattctataa ccttaattat tttctcgata caaagggtta ttaactttaa
     1561 tataagtata atgatgtgcc tcatcttcaa gacgcattgt tgtaacacac ttataatcta
     1621 taaatggcgc gaacatggta tctttaattt catttatgcg attctcattt acttgattag
     1681 atttgtgtgt cgaaagcaca agttgatcaa agatgttatc tagtacatca cgaacgatat
     1741 accacatatg tctttccaag tttgaatcat ttgatgcttt agagattgta agaattaatt
     1801 cgcctaaatg gttttgaacg gtagaataaa aggctttgtt aaacacagac gtttttgaat
     1861 cagtaagaat tcttgatttt tcatggaaat gagatgtact gtatcccatt tcatttagtt
     1921 gtgctttatc aattcttaaa ccttcaaagt ctctaatata catcgtgtcc aataaaccat
     1981 ctttccgaaa tgttgcaata gcattttgca agtgagcctc taatgcaatg ccatatttag
     2041 taactagtgg gattacgaga ccaagcaatg ctttactata agtttcaatc cacgatttcg
     2101 ccgatgattc aaaatcagac aatgatgcag ctgattgata acgtttaatc aatgtcacga
     2161 caggtgattc attgttaaat gggtaggttg caactaaact tgaaggaatc attggtgtga
     2221 cttcttgtgg aatcatttgg tatatgtttt ttctaaataa tgtacctaat tgttcacttc
     2281 gttcagtttg atagtctgct tcgtcttgct cattataaaa atgaatacca gcaacttcat
     2341 caataattgt tgatgcatag gacttaaata tgacatcttt ctccaaaata tcatttaaaa
     2401 tacgtgtcat tagtggacca ttgtgcgttg tttgttctga taatgtacga atttcacctg
     2461 taatatgaac gtttgtcgac aatttgatgt gtggcgacat agctgggtat ttaggaacta
     2521 atgttctgaa agataaacca gcataataat ccaacgtatg ttttgcttca atgattaatt
     2581 ctttatctac ttctgcttga taatcagaat gtaatacgtc atctaattgc catggatgta
     2641 caatcataat gtgataatca ttaaagttaa actttggcgt aaattcattt tctaattgtt
     2701 taattaagtc cggaaatagt tgatgaacag ttgtatcata atctttagac agtgacatag
     2761 tacggcttaa tttactgtga atcagtacta ttttcaactt aataggttga ttgaattctg
     2821 aagaatatag gaatgtttgt aatgcattta aacctttacg taatttagcc ccaggatgta
     2881 gcggatgacc ttcaataacg gcttgctctg aacgcaagta actatcttcg ctattttcga
     2941 taatattaaa taaaggtgta gaatcatgtt gcattgacag tgcttgatag ctaattgcaa
     3001 atgtcatatt agttgcactg tttattaaat cttgctgaaa ttgatcacta gcagcatttt
     3061 ttaaatctgg tgcttcaatt aaaatacact caagaatttc atttggatgg tgtactcgtg
     3121 taatcgtatt tgtaatgtca tctttaatgt agaaagggcc ttcaacatca attcgatcaa
     3181 aggcatgttc tccagtgata ggagcatata atgtttgctt agcttgtggg aactggattt
     3241 ctagtatatg agtcgttgag atatctaaca taatcaaatc acgactcaat attttcttac
     3301 tttgagtgcg cgctttaact aagttttcgc gatgcattga tgtgactaat ctctgagtga
     3361 ctttatctct tccttgtaaa atcatctctt taaaaatatt agcccaatcg ttattatgtt
     3421 gttgtaaaaa taaatatgtt tcttgttctt ctttgttaaa ttttaatgtc tgttctttaa
     3481 aaattaagtt caagttcata attcacctct atgaaatatt ttacaaaagc aagatagatt
     3541 tgtataatcc atattaatga taatgattct tattatcaac agaatgcggg tgtaagtttt
     3601 atgacaaaat atttttttag cagttctttt ctactatttc taggtaattg gattggacaa
     3661 atagggctaa attggtttgt acttaccact tatcataacg cagtttatct ggggattgtc
     3721 aatttttgca gacttgtacc aatattatta ctaagtgtgt gggcaggggc aattgccgat
     3781 aaatatgata aagggcgatt gctgagaatt acaatttcat catcattttt agtaactgca
     3841 attttatgtg tgcttacgta tagtttcact gcaattccaa ttagcatcat tattatatat
     3901 gcgacattaa gagggatttt aagtgcggtt gaaacacctt taagacaagc aatcttacca
     3961 gatttatcag ataaaatatc tactacacaa gctgtatcat ttcattcatt catcattaat
     4021 atttgtcgtt caatagggcc tgccattgct ggtgtcatat tagcagtcta tcatgcgcca
     4081 acaacatttc ttgcacaggc aatttgttat tttatcgcag ttttattatg tttaccatta
     4141 cattttaaag taactaaaat gcctgaagat gcaacaagat atatgccttt aaaagtcatt
     4201 atagattact tcaaattaca tatggaaggt cgacaaatat ttataacatc attattgatt
     4261 atggcgacag gtttttcata tacgacactt ttaccagttt tgacaaacaa agtatttcca
     4321 gggaaatctg aaatatttgg tatcgctatg acgatgtgtg ccattggtgg tattattgca
     4381 acgctagttt tacctaaagt acttaaatat attggtatgg taaatatgta ttatttaagt
     4441 tcatttttat ttggcattgc tttgttaggt gtggtatttc acaatattgt catcatgttc
     4501 atttgtatta cattgattgg gttatttagt caatgggcac gtacgacaaa tcgcgtttat
     4561 tttcaaaata atgttaaaga ttatgaacgt ggtaaagtac tgagtattat tatgatggat
     4621 agaggtatga ttccattggg aagtctgtta atgagtatat gtgcagatgt gtttggcatt
     4681 gttagaactt tttcaataat gggaataagt actatatgca ttacaatggt attctatttt
     4741 ataaatagaa agttgaagtt aaagttggag gaaagtaatc atggtatatc ttgaatgggc
     4801 aaaggcagat agaaatattc aatatcgtgt aattaacgcc attattaaag aacgtattta
     4861 ccccgagcaa acatttattt cgcaaaaagg atctttaatt gaaattcagt atcatatgca
     4921 tgtgttgact attgaagttg ttagaaaaag tgcattagaa cgctatgagt ttacagggga
     4981 tattacttat ttaaataaag gtgaaacgtc attaattata actttagaag gtttgttaga
     5041 tgtgttgaat catgactttg atatccctat ttcagagcga ctacgcgaag agttaataca
     5101 cagtcgagat agtttagttg aaacatataa gcaaatgtct catagacaaa cattaataag
     5161 tcaaagtttt aaattttcaa gattaccaca agatattaac tttttttcat ggttacaaca
     5221 tgtaaaagat agtgataaga cagatgattt aacttattct gagagtttgg taccagaggg
     5281 gcatccaaca caccctttaa ccaaaacgaa attgccctta actatggaag aagtacgagc
     5341 atatgcacct gagtttgaaa aagaaatccc tttgcaaatt atgatgattg aaaaagacca
     5401 tgttgtgtgc acagctatgg atggtaatga tcaatttatt attgatgaaa taattcccga
     5461 atactacaat cagattcgtg tgtttttgaa gagtttaggt ttgaaaaatg aagactatag
     5521 agcgatttta gtacatcctt ggcaatatga tcatacgata gggaaatatt ttgaagcatg
     5581 gattgctaaa aaaatattaa ttccaacgcc gtttacaata ctttcaaaag caactttatc
     5641 atttaggacg atgtctttaa ttgataaacc ataccatgtt aagttgcccg tcgatgtaca
     5701 agcaacaagt gccgttagaa cagtctcaac tgtgactact gtagatggac caaagttaag
     5761 ttatgcttta caaaacatgt tgaatcaata tccaggattt aaagttgcta tggaaccgtt
     5821 cggtgaatat gcaaatgttg ataaagatat ggcacgtcag cttgcttgta ttataagaca
     5881 aaaacctgaa attgatggaa aaggtgcaac agttgttagt gcaagtctag ttaataaaaa
     5941 tccaatagat caaaaagtta tcgtggatag ttacttagag tggttaaatc aaggaattac
     6001 taaagaaagt attacgacat ttattgaacg atactctcaa gcattaatcc cgcctttaat
     6061 tgcttttatt caaaattatg gaattgcatt agaagcacac atgcaaaata cagtagtgaa
     6121 cttggggcca cattttgaca ttcaattttt agtgagagat ttaggtggtt ctagaattga
     6181 tttagaaaca ttacaacatc gtgtatcaga tattaaaatt acaaatgata gtttaatagc
     6241 tgattctata gatgcagtga ttgcaaaatt ccaacatgct gttattcaaa atcaaatggc
     6301 agaattaatc catcatttta atcagtatga ttgtgttgaa gaaaccgaat tatttaacat
     6361 agtacagcaa gtagtagcgc atgccattaa cccaacacta ccacatgcaa atgagttaaa
     6421 agatattttg tttggaccaa caattactgt caaagcgttg ttaaatatga gaatggaaaa
     6481 taaagtaaag caatatttaa atattgagtt agataatccg ataaaaaaag aggtgtagta
     6541 ctacatggca cacgttaaca taaatatatc gaagattaaa tataacgcca aagtacttca
     6601 aacagttttt caaagtaaaa atatgcaatt cacaccagta attaagtgca tagctggtga
     6661 ccgtacaatt gtagaaagct taaaagcgtt aggtatcaat catgttgcag aatccagatt
     6721 ggataacata attagtattg cagatcagga tttaacatat acgttattgc gtacgcctgc
     6781 caaaaaagag atttcagata tgatagaaaa agttgatatg agtatccaaa cagaattatc
     6841 taccatacat caaataaatg aagtagcaga agttttagga aaaaaacata agattttatt
     6901 aatgatagat tggaaagatg gccgtgaagg tgttctgact tatgatgttt tagattatat
     6961 taaagagatt attcacttga aaaatatcca ttttgtaggt ttagcattca attttatgtg
     7021 ctttaaatct gatgcgccaa gtgatgatga tatctttatg attaatcgat tcgtctcagc
     7081 tgttgaaaga gaaataggat atcgattgaa aattatttca ggtggtaatt cgagcatgtt
     7141 accacaactt ttatataatg atttgggtaa aataaatgaa ttacgaatag gtgaaacgtt
     7201 gtttagaggt gttgatacaa cgacaaatca agcgatagct atgttatatc aagatgcgat
     7261 tacattggag gctgagattt tagaaattaa acctcgagtt aatacacaaa cgcatgaatc
     7321 attcttacaa gctattgtag atattggcta tttagacact aaagtcgata atatttcacc
     7381 tatggatcag catatcaata ttttaggcgc ttcgagtgat catttaatgc ttgatttaaa
     7441 tggtcaagga cactatcaag ttggagatca tatatctttt tcattaaatt atgaagcact
     7501 ttctcattcg atgtatatga aaaatttaca taaggtatat attgatgatt caaagattga
     7561 tacgctactt caaaattttg atgtgaaatc tcccgctatg gtaaaccaat attaatatat
     7621 ttatcaataa gtctaagttg acaagttata ctacatatcg tttacacggt tgtatcataa
     7681 ttgttcaact tagatttttt gtatttgttg atttatcaaa taaagtgcaa cagttcgtca
     7741 cataaaattg caacagataa tatcagctga attacaggga taacggtcat gctaaatggt
     7801 gtcaattgca ttaatgcaaa gatgatatag ccatgataca ttatcagtat tttgtctaag
     7861 gaaatgtgct aattgtagtc ataattatta gaggaaatat atatagtcat acattttagt
     7921 aatataaaaa gattgaacgc tacttgacaa tgataattgt tatcaataaa ataataaatg
     7981 aagttataca tattaaggag tggaacgatg agaggtctaa aaacttttag tatattggga
     8041 ttaatagttg ccttattttt agttgcagct tgtggtaata cggataattc aagtaaaaaa
     8101 gaatcatcaa ctaaagatac tatttcggta aaagatgaaa atggtacagt aaaagtacct
     8161 aaagatgcaa aacgtatcgt tgtattagag tactcatttg cagatgcatt agcagcatta
     8221 gacgttaaac cagttggtat tgctgatgat ggtaagaaaa aacgtatcat taaaccagtt
     8281 agagaaaaaa ttggggatta tacttctgta ggtacacgta aacagccaaa cttagaggaa
     8341 attagtaaat taaaaccgga tttaattatc gctgatagca gtagacataa aggtattaat
     8401 aaagaattaa acaaaattgc accaacatta tcattaaaga gttttgatgg tgactacaag
     8461 caaaatatcg atgctttcaa gacaattgcg aaagctttag ataaagaaaa agaaggcgaa
     8521 aaacgtcttg ctgagcatga taaattaatc aataagtata aagatgaaat taaatttgat
     8581 agaaatcaaa aagtgcttcc agcagttgtt gctaaagctg gtttattagc acatccaaac
     8641 tattcatatg ttggacaatt tttaaacgaa ttaggattta aaaatgcatt aagtgacgat
     8701 gtaacaaaag gtttaagtaa atatttgaaa ggaccttact tacaattaga cactgaacat
     8761 ttagctgatt taaatccaga gcgtatgatc attatgactg atcacgctaa aaaagattct
     8821 gctgaattca agaaattaca agaagatgca acatggaaaa aattgaatgc agttaaaaat
     8881 aatcgcgtgg atattgttga ccgtgatgtt tgggcaagat ctcgtggctt aatttcttct
     8941 gaagaaatgg ctaaagaact tgttgaatta tcaaaaaaag aacaaaagta aggtggaagt
     9001 aaatggctat aaaagaaata agtagccaat ctgccataga tcataaaaga aaaagacgca
     9061 caacactcac gtatatagtg agtttgtgct ttctttttat ttgtatatat ttaaatatgg
     9121 cgattggttc ttcgaaaatt aattttagcg atatcgttca ctatgttact ggtcatacag
     9181 atacgaaagc aacgttttta ttgcacaatg tacgtatgcc aaggatgatt gcagggttat
     9241 ttattggcgg tgcattagcg gtatctggtt tgttaatgca agcaatgaca cgcaatccgc
     9301 tagcatcacc taaaattttt ggtgttagtt ctggcgcgtc atttgtcatt gtattagtaa
     9361 cgattattat tccatcatta gaatattatg cattatattt gggtgtgata ggtgcattta
     9421 taggtggttt aactgtttat acactttcag gtgctacgaa aggtatgaca cccattaaat
     9481 tagcattggc tggtatggcg atccatttgt tttttagtag tatgactgaa ggtattatta
     9541 ttttaaatga gaattctaat gaacaagtga tgttttggct tgttggttca ttatccagta
     9601 tgaagtggga tgagatttta accattctac catggcttat tggtgcatta attgcaacag
     9661 tctttattgg gcgtcagtta acgataatgg aacttggcga tgacattgct aagggattgg
     9721 gtcaaaatat aaataaagtt agaattatca ttggactatt agtcattatt cttacaggta
     9781 tgtcggtgtc agtggcagga ccaattggat ttgttggctt aatcgtaccg catatagtca
     9841 aacgctatgt gagtaagaat tatttagtca tgattccatt aacatttatt ataggtgcag
     9901 atttgttact actatcagat gtattaagtc gtttaattac atatccttat gaatcaccag
     9961 tagggattgt tacatcattc gtaggtgcac tttacttctt atttataacg attaaagggg
    10021 tgaaaagaat atgatgacaa cgaaaattat acgtcgttat agtttaatca caatcctttt
    10081 aattgtgagt atattcataa gtttatgtgt agggtctgtc atgattcatc cgattgatgc
    10141 tattaaggga atctttgcac aagatgattt tattttaaat gagtatcgta tacctagaac
    10201 attacttggt attattatcg gtagtagctt ggctatatca ggtgcaatta tacaagctgt
    10261 aataagaaac ccgttagcct cacctgatgt tataggtatt tctaaaggtg ccagtttagc
    10321 tgctgtgatt attattatga tctttccaac agcaccattg tttgtattac ctataggttc
    10381 attcttaggt gcctttgcag taagtttatt tttatcattt ttaatttcaa aatatgatgt
    10441 taaaggttca aagcttgcct taattggttt agcaataggc gcaatatgta cggcgattgt
    10501 gcagttctta ttaatcagaa atccactgga agcaaacaaa gcgcttgttt ggttgacagg
    10561 tagcctatat ggacatgata tgtcgaatat ttatactata ttaccttggt ttttaataac
    10621 gataccaatc atcattttat tgagttatca attagatgta ttgaatctag gtgatgctgt
    10681 tgcaaccgca ctcggtttaa aagttaaaac tattaaaatg ctattgttaa ttttagcagt
    10741 aatattagca ggatccgcaa tttcagttgt cggtggtatt agctttttag gattaattgc
    10801 acctcatatt gcgagacaat taataggaaa taaaacatta cacgttatta tcatgtcggg
    10861 gttaattggt gctatattgt taacatttgg agatggttta gcccgtggca ttcatccgcc
    10921 actggatatt cctgtagggg ttatcattgc aattatcggt gcaccatact tcttaatatt
    10981 attacgaaga atgaaataac taacatatga ttagagttta aaaaaggtta agtacgaaat
    11041 cagtaattgt acttaacctt ttttgaattc atcttgaaaa attacaagaa atagcgtata
    11101 tttaataact gtaattattc attattttgc atacataaac attttaaaag atagaatgat
    11161 aaggaatatg tttgttaact gaatagaatt ctgtatatac ttaaaacgaa tacatagaga
    11221 aatggattga ttttatggat agcttttcaa ggaaagagat agttattggg agacttaagt
    11281 ttattacgat gtctttaatt ggtatcttat tatttttagt accaattcca gtcgaacaag
    11341 atggacagaa gcaaacaacg ttgcccgtgg catttttagc aggcgtgctt aaagatgtat
    11401 taggtggcgt aatgccattt ttaattgtga cgataattac tttgtcgggt atcataacac
    11461 tgatttgttc aactatttta aaagataaat tgaaacctga cgggctaatg aataatgctt
    11521 ttaacgttag aattggttgg ttaattttgc gcctacttgc agttgttttt gcatggatga
    11581 catttttacg aattggttca aaggttattt actcagatga aacgggtgga ttattgttct
    11641 caagtttatt gccaacatta gtggcagtat tcttatttgc agctctattt ttaccgctat
    11701 taatggaata cggtttgtta gagatgttgg gtcctatttt tagaccggtt atgagaccct
    11761 tatttacatt gccaggacgt tcgacggtag ataatttagc ctcatttatt ggagacggaa
    11821 ctgttggagt cttaattaca agtagacaat atggtgaagg atattattct cgtcgtgagg
    11881 caacagttat ttcaacgaca tttagtgtag tttctatcac cttcgcaatt gtagttgctg
    11941 aaacagtgca tatgcaaaat caattttttg ctttctattt atcagtgata gtatcctgcc
    12001 tcgttgcagc agtcattatg ccaagaattt ggcctttaaa taaaattcct gatgagtatg
    12061 ctaaggaggt acctgaaagt gcgcgtactg aggcattgcc agaaggaaag acggcattga
    12121 gacatggctt tgatactgca acagaagtag gtattaaagc accgggcgtt gttgactttt
    12181 ttaagtcagg attaaaaaca gtcgttgata tgtggtttgt tattttgcct gtagtgatga
    12241 gtattggtac tattgctacc attattgcga actacacgcc cttttttgtc atattgggta
    12301 aaccttttgt tccattttta gagttaatgc aaatacctga agcggcacag gcttctcaaa
    12361 cgattattat cggtttcgcc gatatgtttt taccttctat attaattgaa ggtgtacaaa
    12421 atgatataac tcgttttgtt attggggcac ttagtatatc gcagttaata tacttgtctg
    12481 aagtaggtgg cgtcatactt ggttcgaaga ttcctgtaag catcggcaaa ttgtttatga
    12541 ttttcttgat tagaacaatc attacactac caattatttc tttgatggca catcttttgt
    12601 tataaatata tgtggaaaag gacaactgtt aaaattatgg aaacagttgt ccttttgtat
    12661 ttgtttatgc tgggtgttga accaattaaa aaaatcattc atgaagccct caccatgaat
    12721 gattttttta tacaatttat ttagttaatt cattgtaaac tttttgatcg ttttgagtat
    12781 aaataatgta ttcgtggtct tcagtatcga taataacgcg attcgtttta ccaaacgttg
    12841 agccgattct agatacatct ttgctgtcta atttaggaac tgcatgaata tcttggtctt
    12901 gtgtaatatt tttaatttca cttgtaggaa ttttgatatc agcaactctc cattgaatac
    12961 gcacttcatt attatctttc tttactgtca ttgccattat tcaaacacat cctttaaata
    13021 ttttgtaaat acatcataaa cgattttgta atcgttttca agagttatgt gatacttttt
    13081 taaattgtgt catactaatg atttttaacc cgaaaatatg ttcgtgtttt tgttagggat
    13141 atggtaaaat gtgagtatta aaggagaaca aatatgacag gtaaaacaca tgcttcatgc
    13201 ggcatgctcg ttggagcgct aacaacacaa tattttcaaa cggatatttt ttcgtcggtt
    13261 acggttatca ttctagcaac tctagctagc ttattacccg atatatgtca cactcaaagt
    13321 aagattggca gaaggtttaa ggtaattagt ttttttgtga gattgatctt tggacatcga
    13381 acctttacgc attcaatatt atttatcgca atcatagcat ttttattgca aattattcag
    13441 acgcctaatt actatatggc agcaattata attggattag tgtcacatgt tatactagat
    13501 atgataacac caaaaggcgt gaaattattt tatccgttac cgtttaatgt gaagacaccg
    13561 attcaattta aaacaggtgg acttgtagac ttatctttag ctactgcgtt aatggtcgga
    13621 acagtttatg ttttatttca gcctttcatc aatgatataa taagcaactg gaatactaag
    13681 tttttataga aaataaatta ttaaaggtta caaactcagc aggaggcata aaatgctaga
    13741 taaaaatcaa ttagctaaat ataaacaaga tcatttgtgt gaatatgaaa aaataatgag
    13801 taacaatgaa aaagaagcac ttgaagagaa ggtagcgtca ttagatttag attttattgc
    13861 caaattatat aacgatttat acatcaataa gaaaacaata gatgatgtat ctgcagtttc
    13921 tgaagtgaaa tatgatatta aatcacaaat gagtgatgat gagattaagc gtttagaggg
    13981 acaaggactt caagctatta aagaaggaca atttgcagta cttttgatgg caggtggaca
    14041 aggaacaaga cttggatata aaggacctaa aggttcgttt gaaattgaag gtgtaagttt
    14101 atttgaactt caagctaacc aattaaaaac attgaatcat caatctggac atacgattca
    14161 atggtatatt atgacaagtg atatcaatca tgaagaaact ttagcttatt tcgaagcaca
    14221 tagttatttt ggatatgatc aagaagcaat ccatttcttt aaacaagata atattgtggc
    14281 gcttagtgaa gaagggaagt taattttaaa tcaacagggt cgtattatgg aaacgccgaa
    14341 tggtaatggt ggcgtgttta aatctttaga caaggcagga tacttagaag aaatgtctaa
    14401 taatggcgtt aagtatattt tcttgaataa tatcgacaat gttttagtaa aagtgttgga
    14461 tccactattt gcaggattta cggtagaaca tgattacgat attacttcta aaacgattca
    14521 accaaaacca ggagaaagtg ttggacgttt agttaatgtc gattgtaaag atacagtact
    14581 ggagtattca gaattagatc cagaagttgc aaatcaattt aacaatgcta atatcggtat
    14641 tcatgcattt aaacttggtt ttattttaaa cgctgtaaat cgtgaattac cttatcattt
    14701 agctattaag aatttgaaac aattagatga gaactttggt gttattgaac aaccaacttt
    14761 aaaattcgaa ttgttctatt ttgacatatt tacttatgga actagttttg tcacgttaca
    14821 agttcctaga gaagaagaat tttcacctct taaaaataca gaaggtaaag atagtgttgc
    14881 aactgcaaca gaagatttac gtagaatggg tttaatttaa tgataggcgg tgactatgat
    14941 gtccaaatct agtgaaaaaa gtaatgacac aattgcagaa acatttaagg atatcattcc
    15001 attgtcattt ggagaagaaa taggcaatgc tgcatctcat gggttagcag cgctgttaac
    15061 actattagtc ttaccttatg cggctgtaca tagttatatt gcaaatggca cacttgcatc
    15121 agttagtatg tcaatttatg ttatttctat ctttatgatg tttatttcat ctactattta
    15181 tcattctatg caaaatgaaa cgcctcataa atatatttta aggattattg atcatagtat
    15241 gatttatgta gcaatatcag gtacatatac gcctatttta ttaacagttg taggtggttg
    15301 gattggatgg acagtgttta tcctattatg gggcacaacg ctttggggaa ttttatataa
    15361 atccattgct gtcaaagtaa accaaaagtt aagcttaatt gtctatttgg taatgggttg
    15421 ggtaggtatt atcttgctac caataatatt tattcgtaca tcttggatat ttattttatt
    15481 tatttttcta ggcggtgtgt catatacgat tggtgcatgg ttctatgcac aaaaaaacag
    15541 accatatttt catatgatat ggcatatttt tatcgttata gcatcattat tgcatttaat
    15601 tgcaatctta tattttatgt agtcgtttag aaaaggtggg gggaactccg ctttttttat
    15661 tacttaattc attctaatag aggattgttt tgcttttttt aaatcggtat gatttttaaa
    15721 gctgggagtg cacttaattt gtattaatca gacatttgat ggatacgttt atttgaattt
    15781 tttagtaggt gcaacaaata gattttttaa aaaactaatt tgaatttaaa agagggcaag
    15841 ataggaaata gtaaaattag aaattacaaa gcactatcat tattataaaa ggaggtatag
    15901 catgcgttta aaatcaattg taactgtaat agctttaata ttaatcatgt ttatggctgc
    15961 aatcgaatca tcaattattt ctttagcgtt accaacaatt aagcaagatt taaatgcagg
    16021 gaatttaatt tcattaatat ttacggctta ctttattgca ttagtgattg cgaatccaat
    16081 agtaggtgaa ttattaactc gatttaaaat tatttatatt gctatcgcag gtcttacact
    16141 attcacggtt ggtagtttaa tgtcaggttt aagcacacat tttagtatgt tgattatatc
    16201 acgtgtaatt caagggtttg gatctggtgt catgatgtcc ttgtcgcaaa ttgtgcctaa
    16261 actagcgttt gaaattccat tacgctataa aataatgggt atcgttggta gcgtttgggg
    16321 gatttcaagt atcattggtc cgttactagg aggcggtata cttgaatttg caacttggca
    16381 ttggttattt tttattaata ttccgatagc aattattgca ataatattgg ttgtctggac
    16441 atttcatttt tcagaagaag aaactgtggc taaatcaaaa ttcgatacta aaggtatcac
    16501 cttgttttat attttcattg gtttaattat gtttgcattg ttaaaccaac agcatctata
    16561 tttaaatatc ataggttttg ttttagcaat attaattgca cttcgattat ttaatgttga
    16621 gaaaaaagtt tcatccccat tcttaccagt agcagaattt aatcgaatga ttactttggt
    16681 ctttattaca gatcttctta cagctgtttg tttaatgggc tttaatttat atattcctgt
    16741 gtatcttcaa gaacaactgg gattatcgcc attgcaaagt ggattagtta tttttccact
    16801 ttctgtagcg tggattacat tgaattttaa tttgcaccat attgaagcga agttatcaag
    16861 aaaagttatc tatttgtcgt cttttacatt attattatta agtagtataa tcattgcgtt
    16921 tggtataaaa ttaccaatcc ttatagcatg tgtcttaatt ttaagtggaa taagctttgg
    16981 atatatttat acaaaagata gtgtaattgt ccaagaggaa acaagtccaa tacaaatgaa
    17041 gaaaatgatg tcgttttatg gattaacaaa aaaccttggc gcatcaatag gttcgacgat
    17101 tatgggatac ctttatgcat taaaatcagg attatttggt gcaaacttgc ataatatttt
    17161 aggcgttgta tccttgataa gtgtagggct catcgttgta tggctcatat tttatagaga
    17221 agcggcgtca caaacaaatg aatagaatta tcattaaaat tgatgtagtg taaataaagt
    17281 aagaaataat cattttacta ggtttgaagt gtaatcaact atcttaaaat gaaaagcaat
    17341 ataaattatt tatggtaagg aggacaatag ttatgaatta tcttaaacat aagttttata
    17401 atttattaac aacaattatt gttctcttta tctttgtgct ttctggtgcg atatttttaa
    17461 cgtttttagg attcggacta tatggattaa gtagaattct tatttatttt aggttaggtg
    17521 acttcacata taacagaagt atgtacgaca acctattgta ttatggcagt tatataatct
    17581 ttgggtactt catcatattt gcagtcgagc atttaatgga ttattttaga aaaatgttac
    17641 ctgaaaatgc ttattttaga ggtgcaactt ttcatttaat ctcttatatg gttgcaacaa
    17701 cgttatttta ttttattatt catctgaact atgtatatat caatattgat ttttgggtca
    17761 tcatggttat tataggcttt ttatatgttt gtaagttgca gttttaccct gaaagtaaaa
    17821 atctaaacaa tagaaaatag agttttgaag ttgggggcaa tgatgtgttc caacttcttt
    17881 ttattcatat agtagaaaat gagttgtttt gcttcaatta atcacggtta ataataacca
    17941 ttgatataaa tagttggtac tgtaatctga aatatatttt aagtatatat gctaataaac
    18001 gtaaatttgt tacaaaggag gaattgtggt ggctaatgtt gaattaacaa cgcgaagacg
    18061 aaattttata gtagctgtga tgttaatcag tgcttttgta gctattttaa atcaaacatt
    18121 attaaataca gcgttaccta gtattatgag agagttaaat atcaatgaaa gtacttcaca
    18181 atggttagtt actggtttta tgcttgttaa tggcgtcatg atacctctaa ctgcatactt
    18241 aatggacagg attaaaacta gacctttata cttagcagcg atgggaacat ttttattagg
    18301 ttctattgtt gcagccttag ctccgaattt tggagtttta atgttagcac gtgtaattca
    18361 agcgatgggt gcaggggtac ttatgccttt aatgcaattc acattgttta cgttattcag
    18421 taaagaatat agaggatttg caatgggatt agctggttta gttattcaat ttgcaccagc
    18481 aattgggcct actgttactg gattaatcat tgatcaagca agttggcgtg taccttttat
    18541 tataattgta ggaattgctt tagtcgcatt tatcttcggt ttaatttcaa tctctagtta
    18601 caatgaagtg aaatatacga aattagataa gcgctctgta atgtattcga cgattggatt
    18661 tgggttaatg ttatatgcat tcagtagtgc aggcgactta ggatttacta gcccgatagt
    18721 tataggtgca ttgataataa gtatggttat tatctattta tttatacgta gacaatttaa
    18781 tattagtaat gcacttttaa atttaagggt ttttaagaat agaacatttg cattatgtac
    18841 gattagttca atgattataa tgatgtcaat ggttggacct gcactgctta taccgctata
    18901 tgttcaaaat agtttgtctt tatctgcctt gttatcagga cttgttatca tgccaggtgc
    18961 aatcataaat ggtattatgt cggtttttac aggtaaattt tatgataagt atggtcctag
    19021 accactgatt tatactggtt ttacgatttt aacaattact actattatgt tgtgtttctt
    19081 gcatacagac acatcttata cgtatttaat agtcgtatat gcaattagaa tgttttcagt
    19141 ttctttactc atgatgccga taaatactac aggaattaat tctttgagaa atgaagaaat
    19201 ctcacatggc acggctatta tgaactttgg tcgtgtaatg gctggttcac taggcacagc
    19261 tttaatggtt actttgatga gttttggcgc aaaaatattt tcatctacat cgccatcgca
    19321 tttaactgca actgaaatta aacagcaatc aattgctata ggggtggata tctcatttgc
    19381 ttttgtagcc gtgcttgtta tggcagctta tgtgatagca c
//
LOCUS       DAKPJH010000050        18003 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.050, whole genome shotgun sequence.
ACCESSION   DAKPJH010000050 DAKPJH010000000
VERSION     DAKPJH010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.050"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            24..1130
                     /gene="rpoD"
                     /locus_tag="OY092_001444"
     CDS             24..1130
                     /gene="rpoD"
                     /locus_tag="OY092_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HCX1076392.1"
                     /translation="MSDNTVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEK
                     LQNFDIDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPSDLSAPPGVKINDPVRMY
                     LKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDL
                     IQEGNMGLIKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINK
                     LIRVQRQLLQDLGRDPAPEEIGEEMDLPAEKVREILKIAQEPVSLETPIGEEDDSHLG
                     DFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGK
                     VFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD"
     gene            1261..1938
                     /locus_tag="OY092_001445"
     CDS             1261..1938
                     /locus_tag="OY092_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HCX1076393.1"
                     /translation="MISLNNRLTTVSRFLKQGTIADIGSDHAYLPIYAIQNHLCECGI
                     AGEVIQGPFQAAVKNVAANQLEDRIDVRLGDGLSVIHPEDVIDNITICGMGGPLIAKI
                     LKDGQDKLSQHPRLILQSNIQTENLRQTLQQLNYEIIDEIIMEEKGHIYEIVVAEYST
                     QLIELSSDELKFGPKLLNNKNEYFIKKWQRELEALYHIKSKLNTEQHHQRLAQINDEI
                     AVIERVL"
     gene            1941..3041
                     /locus_tag="OY092_001446"
     CDS             1941..3041
                     /locus_tag="OY092_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HCX1076394.1"
                     /translation="MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALD
                     CTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLD
                     VNPYGVNMMLAKAMGLKNISIINNQQGVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
                     YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYH
                     PYETPVFDFIEIKQTSLYGLGVMAEVDNQMTLEDFAADIKSKLNIPSVRFVGKSNQKI
                     KRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKE
                     GLKTLLMNWFNTEKINIDVEASTINTDPFQYI"
     gene            3155..4501
                     /locus_tag="OY092_001447"
     CDS             3155..4501
                     /locus_tag="OY092_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCX1076395.1"
                     /translation="MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNL
                     IGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV
                     SVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMI
                     DLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNI
                     EFFLIPTKGAAKVEKTLNLIDILNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGG
                     LTPRERKQQMKRIRNLEFQYVIASDLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRT
                     GRGNYKGVAITLYSPDEEHNISLIENRGFVFNTVDIKDGELKEVKAHNQRQARMRKDD
                     HLTNQVKNKVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG"
     gene            4511..5401
                     /locus_tag="OY092_001448"
     CDS             4511..5401
                     /locus_tag="OY092_001448"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HCX1076396.1"
                     /translation="MLLGSHVSMSGKKMLEGSAIEAHEYGETTFMIYTGAPQNTRRKS
                     IEDLNITKGHEVMEKYGLSNIVVHAPYIINIANTTKPETFNLGVDFLQQEIERTQAIG
                     AKDIVLHPGAHVGAGVDAGINKIIEGLNEVLTNDNNVRIALETMAGKGTEIGRSFEEL
                     ARIIDGVHNNERLSVCFDTCHTHDAGYNVKEDFDGVLNEFDKIIGVDRIKVVHVNDSK
                     NDRGAQKDRHENIGFGYIGFDALNYIVHHDSFKDIPKILETPYVGEDKKNKKPPYKLE
                     IEMLKQQQFDPELKNKVMQQ"
     gene            5527..6312
                     /locus_tag="OY092_001449"
     CDS             5527..6312
                     /locus_tag="OY092_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HCX1076397.1"
                     /translation="MRGENTMTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGP
                     NGAGKSTLLKLILGLLPLQSGEIFVEGIDFKNKKTSIKLSYVSQKANAFNSGFPASVK
                     EVVLSGLTKTKRLFQTFNSKDNEKVIKVLERLNISDLIHKNIAELSGGQQQRVMIARA
                     LISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTHDIGVVADTATEVAC
                     LNKHLHFHGTTDEFKSLDEVEISKIYGHPVRFVDHQHNRECCN"
     gene            6354..7217
                     /locus_tag="OY092_001450"
     CDS             6354..7217
                     /locus_tag="OY092_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HCX1076398.1"
                     /translation="MIDALLNFDFMRYSLISGILIGFIAPLIGAFIVVRRLSLIADAL
                     SHVTLGGISFGMFLLTIMPTLVFINPMWFGILFAIVGALLIEKLRTSYTAYQEIAIPI
                     IMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNISDLTTIIVIAIIVVLFITLFYK
                     ELFILSFDEEYSKVIGIPKWIQFLFIVIVAMVISASMRVVGILLVSALITLPIAISMR
                     ITKSFKQLILLSVFLGELSVILGLVLAFYMDISPGGVIVVLLVILLMITMAYQKMRMK
                     FKKGANINEYK"
     gene            7204..7614
                     /locus_tag="OY092_001451"
     CDS             7204..7614
                     /locus_tag="OY092_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HCX1076399.1"
                     /translation="MNTNDAIKILKENGLKYTDKRKDMLDIFVEEDKYINAKYIQQVM
                     DENYPGISFDTIYRNLHLFKDLGIIENTELDGEMKFRIACTNHHHHHFICEKCGDTKV
                     IDYCPIDQIKLSLPGVNIHKHKLEVYGVCESCQD"
     gene            7890..8489
                     /locus_tag="OY092_001452"
     CDS             7890..8489
                     /locus_tag="OY092_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HCX1076400.1"
                     /translation="MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVE
                     GTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKI
                     KEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGL
                     DVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK"
     gene            8610..10685
                     /locus_tag="OY092_001453"
     CDS             8610..10685
                     /locus_tag="OY092_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HCX1076401.1"
                     /translation="MLKRLKEKSNDEIVQNTINKRINFIFGVIVFIFAVLVLRLGYLQ
                     IAQGSHYKQIIKNDENITVNESVPRGRILDRNGKVLVDNASKMAITYTRGRKTTQSEM
                     LDTAEKLSKLIKMDTKKITERDKKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDK
                     QLLSKIGKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVSEKEYAAVSQQLSK
                     LPGVNTSMDWDRKYPYGDTLRGIFGDVSTPAEGIPKELTEHYLSKGYSRNDRVGKSYL
                     EYQYEDVLRGKKKEMKYTTDKSGKVTSSEVLNPGARGQDLKLTIDIDLQKEVEALLDK
                     QIKKLRSQGAKDMDNAMMVVQNPKNGDILALAGKQINKSGKMTDYDIGTFTSQFAVGS
                     SVKGGTLLAGYQNKAIKVGETMVDEPLHFQGGLTKRSYFNKNGHVSINDKQALMHSSN
                     VYMFKTALKLAGDPYYSGMALPSDISSPAQKLRRGLNQVGLGVKTGIDLPNETKGQIE
                     PLTNNPGNYLDLSIGQYDTYTPLQLSKYVSTIANDGYRIQPHIGLTIHESTNKDEVGP
                     LKKKINGTVLNKVNNTENEIKQIQEGFKMAFNDKDGTGYVSFKDTVVPTAGKTGTAEV
                     FQNGEPRVNSTYIGYAPIDDPKLAFSIVYTNQPVPPPWLTGGDLGRDVINYYFKQLGK
                     DDKNKDKDK"
     gene            10798..10947
                     /gene="rpmG"
                     /locus_tag="OY092_001454"
     CDS             10798..10947
                     /gene="rpmG"
                     /locus_tag="OY092_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCX1076402.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERVEMKKFCSRENKQTL
                     HRETK"
     gene            11156..11695
                     /locus_tag="OY092_001455"
     CDS             11156..11695
                     /locus_tag="OY092_001455"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HCX1076403.1"
                     /translation="MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANA
                     IALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGVY
                     YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITS
                     FEPESFDQPVDKLIIYQSA"
     gene            11707..13170
                     /locus_tag="OY092_001456"
     CDS             11707..13170
                     /locus_tag="OY092_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001652331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HCX1076404.1"
                     /translation="MNIDKQFWKTIYYWIRYLNFDIVSREKDDQEIWLAHKRKKQVVI
                     FKQHIKSTQEIRFDKAKVLEHKDEIANFISFEPQSFEFYYFTESEFSEEQLNEVSPIR
                     IKFNVIRHTKDLVKHMPNIFLARLISEDNDKKTYMFYKRKVLTDNFLDKYMQKFSPAT
                     YTIIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI
                     LMNMLSLFIFGKIVEAIIGSWRMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLI
                     GSIFAMMYVSKTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGY
                     YYKVNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIVKQ
                     TINKNYADDQTYYLSGMIMATINSKSEGMTEWERGLRMFPKSGLLNFELAIANRSLND
                     DEKALKYVRKALNTDPKNTDYINLEKELTKSNESKNK"
     gene            13151..13354
                     /locus_tag="OY092_001457"
     CDS             13151..13354
                     /locus_tag="OY092_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HCX1076405.1"
                     /translation="MSRKINNFYDVQQLLKSYGFLIYFKNPEDMYEMIQQEISSLYQY
                     ELLSKEEYLKCTLIINQRRNEQK"
     gene            13351..14337
                     /locus_tag="OY092_001458"
     CDS             13351..14337
                     /locus_tag="OY092_001458"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HCX1076406.1"
                     /translation="MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTL
                     LKGIYDSFVEKVNENNYNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIF
                     EQFVDCPVYVDNDANIAALGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNG
                     SGAEIGHFRADFDQRFKCNCGRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKE
                     NKVTAKAVFDAAKAGDQFCIFITEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPI
                     LIENIKTEYHNLTFTPAQFETEIVQAKLGNDAGITGAAGLIKTYVLDKEGVK"
     gene            14337..14666
                     /locus_tag="OY092_001459"
     CDS             14337..14666
                     /locus_tag="OY092_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH1187 family thiamine-binding protein"
                     /protein_id="HCX1076407.1"
                     /translation="MAIVDVVVIPVGTEGPSVSKYIADIQKKLQEYKAMGKIDFQLTP
                     MNTLIEGELSDVLEVVQVIHELPFDKGLSRVCTNIRIDDRRDKSRKMNDKLTSVQKHL
                     ENSGENL"
     gene            14663..15286
                     /locus_tag="OY092_001460"
     CDS             14663..15286
                     /locus_tag="OY092_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCX1076408.1"
                     /translation="MRISSLTLGLVDTNTYFIENDKAVILIDPSGESEKIIKKLNQIN
                     KPLKAILLTHAHFDHIGAVDDIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPI
                     ITSKVTPEKLNEGSTEIEGFKFNVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRTD
                     LYKGDYETLVDSILDKIFELEGDLPLFPGHGPYTTVDDEQLNPFLHG"
     gene            15338..16312
                     /locus_tag="OY092_001461"
     CDS             15338..16312
                     /locus_tag="OY092_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HCX1076409.1"
                     /translation="MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQ
                     IGNGIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFNKIYFLRISTLPLSLGQESCVI
                     RIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
                     VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVI
                     QASLSGHLVLTTLHATDCKGAILRLLEMGVSVQELIQATNLIINQRLVTTIKQQRQLV
                     CEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTMDKYI"
     gene            16284..17354
                     /locus_tag="OY092_001462"
     CDS             16284..17354
                     /locus_tag="OY092_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000776424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HCX1076410.1"
                     /translation="MKLQWINTFKLHSKKRQLSKAQQIDLLLNLCNLLKYGFTLYQSF
                     QFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVL
                     EETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
                     SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQ
                     LFKTYFVTNELVLFYKNGITLQSIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQIL
                     EKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIKQTQFLQPILFLILG
                     LFIVAIYLVIMLPMFQMMQSIK"
     gene            17368..17679
                     /locus_tag="OY092_001463"
     CDS             17368..17679
                     /locus_tag="OY092_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCX1076411.1"
                     /translation="MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQST
                     GCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFIKEAQKTCKSGETITISNGEAVA
                     N"
     gene            17657..>18003
                     /locus_tag="OY092_001464"
     CDS             17657..>18003
                     /locus_tag="OY092_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HCX1076412.1"
                     /translation="MEKQLQIRKQSAFTMIEILVVMMLISIFLLLTMTSKGLSNLRVI
                     DDEANIISLITELNYIKSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIIN
                     VAKVDIIAFDKKG"
BASE COUNT         6704 a         2339 c         3263 g         5697 t
ORIGIN      
        1 atttaaaatc gggaggccgt ttcatgtctg ataacacagt taaaattaaa aaacaaacaa
       61 ttgatccgac attaacatta gaagatgtta agaagcaatt aattgaaaaa ggtaaaaaag
      121 agggtcattt aagtcatgaa gaaattgctg aaaaacttca gaattttgat atcgactctg
      181 atcaaatgga tgatttcttt gatcaattaa atgataatga tatttcacta gttaatgaaa
      241 aagatagttc agatactgac gagaaactga atccaagtga tcttagtgcc cctccaggtg
      301 ttaaaataaa tgacccagtt cgtatgtacc ttaaagaaat tgggcgtgtt aacttattaa
      361 gtgcacaaga agaaatcgaa ttagccaaac gtattgaaca aggtgatgaa gtagcaaaat
      421 caagacttgc agaagcgaac ttacgtttag ttgtaagtat tgctaaaaga tacgtaggtc
      481 gtggtatgtt attccttgat ttaatccaag aaggtaatat gggtcttatt aaagctgttg
      541 aaaaatttga ctttaacaaa ggatttaagt tttcaacata tgcaacatgg tggattagac
      601 aagcaatcac tcgtgcaatt gctgaccaag cacgtacgat tcgtatccct gtgcatatgg
      661 tagaaacaat taataaatta attcgtgttc aacgtcaatt attacaggac ttaggtcgag
      721 atccagcacc agaagaaatt ggtgaagaaa tggatttacc agcagaaaaa gttcgtgaaa
      781 ttttaaaaat tgcgcaagaa cctgtttcat tagaaacacc aattggtgaa gaagatgata
      841 gtcatttagg agactttatt gaggatcagg aagcacaaag tccttcagat catgctgctt
      901 atgaattatt aaaagagcaa ttagaagatg tgcttgatac attaactgat agagaagaaa
      961 atgtattacg attaagattt ggtcttgatg acggcagaac aagaacactt gaagaagttg
     1021 gtaaagtttt cggtgttaca cgtgaacgta ttcgacaaat tgaagcaaaa gcacttagaa
     1081 aattaagaca tccaagtcgt agtaaacgtt tgaaagactt tatggattaa tttatatcaa
     1141 ttttaatgat tgataccaag acatgaataa gcgcttattt atttttagat taagatttaa
     1201 cttgagtgag gttggtacat tgaataatgt tcaacctctt ttttcataaa ggagaataaa
     1261 atgatttcgt taaataaccg attaacgacg gtaagtcgat ttttaaaaca aggtacaatc
     1321 gcggatattg gctcagatca tgcttatttg ccaatctatg caattcaaaa ccatttatgc
     1381 gaatgcggta ttgcaggaga agttattcaa ggcccctttc aagctgcagt gaaaaatgta
     1441 gctgcaaatc aattagaaga tagaattgat gtacgtttag gggatggctt aagtgttatt
     1501 catcccgagg acgtaatcga taatatcaca atttgtggta tgggcggacc acttattgct
     1561 aaaattttaa aagatgggca agataagtta agtcaacatc caaggttgat tttacaaagt
     1621 aatatccaaa ctgaaaattt aagacaaaca ttacaacaat tgaattatga aataattgat
     1681 gaaataataa tggaagaaaa aggccatatt tatgaaattg ttgtagcaga atattctaca
     1741 caattaatag agctatcatc tgatgaattg aaattcggac caaaattgct gaacaacaaa
     1801 aatgaatatt ttataaaaaa atggcaaaga gagttagaag cactttatca tattaaatcg
     1861 aaactcaata ctgaacaaca tcatcaacgt ttagctcaaa ttaatgacga aattgctgta
     1921 attgaaaggg tgttatagta atgaaaatag ctgatttaat gacattgtta gatcatcatg
     1981 tgccatttag tactgctgaa tcttgggata atgtaggatt gttaataggt gatgaagatg
     2041 ttgaagttac tggtgtttta acagcattag actgtacgtt ggaagtagta aatgaagcaa
     2101 tcgaaaaagg ttataatact attattagtc atcatcctct aatctttaaa ggcgtaacat
     2161 cattaaaagc taatggttat ggtttgatta ttagaaaact aattcaacat gacattaatt
     2221 taatagcgat gcatacaaat ttagatgtaa atccgtatgg tgtcaatatg atgttggcga
     2281 aggcgatggg tttgaagaac atttcaataa tcaataatca acaaggtgta tactataaag
     2341 ttcaaacata tatacctaag gataatgttg gaccatttaa agataagctt agtgaaaatg
     2401 gattagcaca agaaggtaat tatgaatatt gtttctttga aagtgaagga agagggcaat
     2461 tcaaaccagt tggtgaagct aatccaacaa taggacaaat tgataaaatt gaatatgtag
     2521 atgaagttaa aattgaattt atgatagatg catatcaaaa gtcaagggct gagcaattaa
     2581 ttaaacaata ccatccatat gaaacaccgg tatttgattt tattgagata aaacaaacat
     2641 ccctttatgg acttggcgtt atggcagaag tggataatca aatgacattg gaagatttcg
     2701 cagctgatat taaatctaaa ttaaatatcc caagtgtccg ttttgttggt aagtctaatc
     2761 agaaaattaa acgtattgca attattggtg gttcaggtat tggatatgaa tatcaagctg
     2821 tccaacaagg cgcagatgtc tttgttacag gtgatattaa acatcatgat gccttagatg
     2881 ctaaaattca tggtgtgaac ttaattgata ttaatcatta cagcgaatat gtgatgaaag
     2941 aaggtttaaa aacgttacta atgaattggt tcaatacaga aaaaataaat atagatgttg
     3001 aagcatctac aattaataca gatccatttc aatatattta aactaaaatc tcgggatttc
     3061 taaattttga aatttcgagg ttttaatatt tttatttaaa atagcacatt tatactttat
     3121 aatagtaaag atgaacatat aaggaggcca aatcatggca aaacatccat tcgaacaatt
     3181 taatctagaa tctagtttaa ttgacgctgt gaaagacctt aattttgaaa aaccaactga
     3241 aattcagaat cgaattattc caagaatact aaagagaaca aatttaattg gtcaatctca
     3301 aacgggtaca gggaaatctc atgcattttt attaccatta atgcagttaa ttgatagtga
     3361 aataaaagaa ccacaagcaa tcgtagttgc accaacaaga gaacttgcac aacaactata
     3421 cgatgcagcg aaccatttaa gccaatttaa agctggcgtt tcagttaaag tttttattgg
     3481 tggtacagat atagagaaag atagacaacg ttgtaatgca caaccacaat tgattatagg
     3541 cacccctact agaattaatg acttagctaa aacgggacat ttacatgtgc acttagcatc
     3601 atatttagtt attgatgaag cggatcttat gattgactta ggattaattg aagatgtaga
     3661 ttacattgct gcaagattgg aagataatgc aaatattgcg gtgtttagtg ctacaattcc
     3721 acaacagtta caaccatttt taaataaata tttaagtcat ccagaatatg tagctgtcga
     3781 cagtaaaaaa caaaataaaa agaacatcga attcttttta atacctacta aaggtgcagc
     3841 taaagttgaa aagactttaa atttaattga tatactaaat ccatacttat gtattatttt
     3901 ctgtaatagt agagataatg caaatgattt agcacgttca ctaaatgaag ctggtattaa
     3961 agttggtatg attcatggtg gtttaacgcc acgtgaacgt aaacaacaaa tgaaacgtat
     4021 acgtaattta gaattccaat acgttattgc cagcgattta gcatctcgtg gtattgatat
     4081 tgaaggtgtt agtcatgtca tcaattttga tgtgccaaat gatattgact tctttacaca
     4141 tagagtcgga cgaactggtc gtgggaatta taaaggtgta gcaataacgc tttatagtcc
     4201 tgatgaagaa cacaatattt cattaataga aaatcgcggt tttgttttca atactgttga
     4261 tattaaagat ggtgagttaa aagaagttaa agcgcacaat cagcgtcaag caagaatgcg
     4321 caaagatgac catttaacta atcaagtgaa gaacaaagtt cgaagtaaaa ttaaaaacaa
     4381 agttaaacca ggttataaga agaaatttaa gcaagaagtt gaaaaaatga aacgtcaaga
     4441 gcgtaaacaa tttagtaagc agcaaaatag acaaaaacgt aagcaaaaca aaaaaggtta
     4501 ggtgtgtttt atgttattag gatcacatgt ttcaatgagt ggtaaaaaga tgttagaagg
     4561 ttctgctata gaagcgcatg aatatggtga aacaacattt atgatttata ctggtgcacc
     4621 tcaaaatacg cgccgtaaaa gtattgaaga tttaaatata actaaaggtc atgaagtgat
     4681 ggaaaaatat ggcttatcta atattgttgt tcatgcacca tacatcatta atattgcaaa
     4741 tacaaccaaa ccagaaacgt ttaatcttgg tgtagatttc ttgcaacaag aaattgaaag
     4801 aacgcaagct ataggcgcta aagatattgt attacatcca ggtgcgcatg ttggagctgg
     4861 tgttgatgcc ggaattaata agattattga aggattaaat gaagttttaa cgaatgacaa
     4921 taatgtacgt attgcgcttg aaacgatggc aggtaaaggt actgagattg gtcgctcgtt
     4981 tgaagagtta gcacgtatta ttgatggagt tcataataac gaacgtttat cagtatgttt
     5041 tgatacatgt catacgcatg atgctggata taatgtgaaa gaggactttg atggcgtatt
     5101 aaatgaattt gataaaatca ttggagtcga cagaatcaaa gttgttcatg tcaatgattc
     5161 taaaaatgac cgtggcgctc aaaaagaccg acatgaaaat attggcttcg gttacattgg
     5221 ttttgatgca ttaaattaca ttgtgcatca tgatagtttt aaagatattc cgaaaatctt
     5281 agaaacacct tatgttggtg aagataagaa aaataaaaaa ccgccatata aacttgaaat
     5341 tgaaatgttg aaacaacagc aatttgaccc agaattaaaa aataaggtta tgcaacaata
     5401 aaatgataat gctctcttca agaaatgcga taaataaaac ttgaaggggg catatctctt
     5461 tattttgtct tattttgagt cgtaaacatt actgtttaca tatgttacta ggagttgtat
     5521 agttgaatgc gaggtgagaa tacgatgaca ccagtctttg aattgaagaa tgtcaattac
     5581 tactatgatc ataaaaaagt gttagaaaat ataaacatta aaataaataa aggtgaattt
     5641 ttagcaattg ttggaccaaa tggtgctggt aaatcaacat tattgaagtt gattctagga
     5701 ttattacctt tacaaagtgg tgagattttt gttgaaggta ttgattttaa aaataagaaa
     5761 acatcaatta aattaagcta tgtatcacaa aaagcaaatg cctttaattc aggtttccca
     5821 gcaagtgtta aagaagttgt tttaagcgga ttaacaaaga caaaacgtct tttccaaaca
     5881 tttaatagca aagataatga aaaagtgatt aaagtactag aaagactgaa tataagtgat
     5941 ttaattcata aaaatatagc agaattatca ggtggtcaac aacaacgtgt aatgattgct
     6001 cgagcattga tttcagaacc tgcagtatta gtacttgatg aaccgacgaa tggtattgat
     6061 gcaaaacatg taagtgaatt ttataatact ttagatcaat taaaacaaga aggtatcact
     6121 attatcttag ttactcatga tattggtgtt gtagcagata ctgctactga agtagcatgt
     6181 ttaaataagc atttgcattt ccatggtaca actgatgagt ttaaatcact tgatgaagtt
     6241 gaaatttcaa aaatttatgg acatcctgta cgttttgtcg atcatcagca taatcgagaa
     6301 tgttgtaatt aataaagatt tgagtttata taaaatggaa aggcgtgtca caattgatag
     6361 atgcattatt gaattttgat tttatgaggt actctttaat tagtggtatc ttgataggtt
     6421 ttattgcgcc tctaatcggt gcttttatcg ttgttagacg actatcactt atagctgatg
     6481 ctctaagtca tgtaacttta ggtggtatat ccttcggtat gtttttactt actattatgc
     6541 caacactagt atttattaat ccaatgtggt ttggaatctt attcgcaata gtaggtgcgc
     6601 ttctaattga aaaattaaga acgtcataca ctgcttacca agaaattgct attccaatta
     6661 taatgagtgc tggtatcgcc ttgagtgcaa tcttcatttc attagctgat gggttcaatc
     6721 aagaaattgt tggattgcta tttggctcaa taagcgcagt gaatataagt gatttaacaa
     6781 cgattattgt cattgccatc atagttgttc tgtttattac attgttttat aaagaattat
     6841 ttatattgtc atttgatgag gaatatagta aagtcattgg cattcctaaa tggattcaat
     6901 ttttatttat tgttattgta gcgatggtta tttctgcctc aatgcgtgtt gtagggatac
     6961 tgttagtaag tgcgttaatc acgttaccaa ttgcaataag tatgcgaata acaaaaagtt
     7021 ttaagcaatt gatattacta agtgtatttt taggtgaatt atcagtaata ttaggcttag
     7081 tcctagcttt ctatatggac atttctccgg gtggtgtaat tgtagttcta ctggttattt
     7141 tacttatgat tacaatggct tatcagaaaa tgcgaatgaa gtttaaaaag ggagctaata
     7201 tcaatgaata caaatgatgc tattaaaatt ttaaaagaga acggtttaaa atatacagat
     7261 aaacgtaaag atatgttaga tatttttgtc gaagaagata agtatataaa cgcaaagtat
     7321 atacaacaag ttatggatga aaattatcct ggaatttcat tcgacacaat atatagaaac
     7381 ctgcacttat ttaaagattt agggattatt gaaaatacag aacttgatgg tgaaatgaaa
     7441 tttagaatcg cttgtacaaa ccatcatcat catcatttta tctgtgaaaa gtgtggagat
     7501 acaaaggtaa tagattattg tccaatagat cagataaaat tatcactacc tggtgttaat
     7561 attcacaaac acaaacttga agtttatggt gtatgtgagt cttgccaaga ttaatataaa
     7621 gaaatgagat ttatacacat taggtcagat gtatgcataa atctcatttt ttaaattata
     7681 gaagataaag gttcatttca tactccgttc gtatgatttt atggcaaatc tgttaacttt
     7741 ttatatacaa aatgtttaat tatttttgat ttgagttata ttaaatgagt agagaaaata
     7801 ataagtagta gtatttaagc aaattctttg ttgaaccagt cactgcttgt tattatttac
     7861 ttacagacat tttaggagga tgattattta tggcttttga attaccaaaa ttaccatacg
     7921 catttgatgc attagaacca cattttgaca aagaaactat ggaaattcac catgacagac
     7981 atcataacac ttatgttacg aaattaaatg ctgcagtaga aggtacagat ttagaatcta
     8041 aatctattga agaaattgtt gctaatttag acagtgtacc agctaacatc caaactgctg
     8101 tacgtaataa tggcggtgga catttaaacc attcattatt ctgggagtta ctttcaccaa
     8161 actcagaaga aaaaggtact gttgtagaaa aaattaaaga acaatggggt tctttagaag
     8221 aatttaaaaa agaatttgct gacaaagcag ctgcacgctt tggttcaggt tgggcttggt
     8281 tagtcgtaaa caatggccag ttagaaattg tgactacacc aaaccaagat aatccattaa
     8341 ctgagggtaa aacacctatt ttaggtttag acgtatggga acacgcttat tacctaaaat
     8401 atcaaaacaa acgccctgac tacattggcg cattttggaa tgtagttaac tgggaaaaag
     8461 ttgacgaatt atataatgca acaaaataaa gtatgattac ttgttcggtc tcttaaatga
     8521 gaccgttatt tttttgtcaa aaagatagaa ataatttcta aattcatata tgatttaaag
     8581 tgaaagactt tgaatagagg taggtagttt tgttaaaaag actaaaagaa aaatcaaatg
     8641 atgaaatcgt tcaaaataca attaacaaga gaattaactt tatatttggt gtgattgtat
     8701 ttatttttgc agtactagta ctacgtttag gttatttaca aatcgcacaa ggctcacatt
     8761 ataaacaaat tataaaaaat gatgaaaaca ttacagtgaa tgagtctgtg ccaagaggtc
     8821 gtattttaga cagaaatggg aaagttttag ttgataatgc ttctaaaatg gctattacat
     8881 atactagggg tcgaaaaaca acacaatcgg aaatgttgga tacggctgaa aagttatcaa
     8941 agctaatcaa gatggatact aagaagatta cagaacgtga taaaaaagat ttctggattc
     9001 agttgcatcc taaaaaagca aaagcaatga tgacaaaaga acaagctatg ttagcagatg
     9061 gaagtattaa acaagatcaa tatgataaac aactgttatc gaaaatcgga aaatcacaat
     9121 tagatgaatt gtcttctaaa gatttacaag ttttagccat ttttcgagag atgaatgcag
     9181 gaacagtttt agatccacaa atgataaaaa atgaagatgt cagtgaaaaa gagtatgcag
     9241 cagtttctca gcaactttcc aaattaccag gtgttaacac gtctatggat tgggatagaa
     9301 aatatccata tggcgacaca ttaagaggta tattcggaga tgtatcgaca cctgctgaag
     9361 gtattccaaa agaattgaca gaacattact tatccaaagg atattcacgc aatgatcgtg
     9421 ttggaaaatc ttacctagaa tatcaatatg aagatgtatt gcgtggtaag aagaaagaaa
     9481 tgaaatacac aacggacaaa tctggtaaag ttacatcttc agaagtgtta aatcctggcg
     9541 ctcgcggtca agatttgaaa ttaacgatcg atatagatct tcaaaaagaa gtagaagcat
     9601 tattagataa acaaattaag aagcttcgca gccaaggtgc aaaagatatg gataatgcta
     9661 tgatggttgt acaaaatcct aaaaatggag acattcttgc gcttgccgga aagcagatta
     9721 ataagagtgg taaaatgact gattatgaca ttggtacgtt tacttctcaa tttgcagttg
     9781 gatcttctgt aaaaggtgga acattattag ctggttatca gaataaagct atcaaagttg
     9841 gagaaacaat ggtcgatgaa ccattacatt tccaaggtgg tttgacaaaa cgatcatact
     9901 ttaataaaaa cgggcatgta tctattaatg ataagcaagc tttgatgcat tcatcaaacg
     9961 tatatatgtt taaaacagca ttaaaattag cgggagaccc ttattattct ggtatggctt
    10021 taccatcaga cataagttca cctgcccaaa agctaagaag aggattgaat caagtaggct
    10081 taggtgtgaa aacaggtata gatttaccaa atgaaacaaa aggtcaaatc gaaccattaa
    10141 caaataatcc aggtaattat ctagatttat caattggtca atatgatacc tatacaccat
    10201 tacaattatc aaaatatgtt tcaactatag cgaatgatgg ttatagaata caaccacaca
    10261 ttggattaac gattcatgaa tcaactaata aagatgaggt tggtccactc aagaagaaaa
    10321 ttaatggcac cgtcttgaac aaagttaata atactgaaaa tgaaatcaaa caaattcaag
    10381 aagggttcaa aatggcgttt aatgataaag atggtactgg atatgttagt tttaaagata
    10441 cagtagtgcc tactgctggt aaaactggta ccgctgaagt gttccaaaac ggagagccaa
    10501 gagttaactc tacttatata ggatacgcgc caattgatga tccaaaatta gcgttttcaa
    10561 ttgtatatac aaatcagcct gtaccaccac catggttaac aggtggagac ttaggtagag
    10621 atgtaattaa ctactacttt aagcagttag gtaaagatga taaaaataaa gataaagata
    10681 aataaaattt aacctgacga ttgtgtagcg catggttgta aaattttaac tttgcaaata
    10741 ttatagatgt tggtataata ataaagtcgt atttagaaat gataaggagg aataaccatg
    10801 cgcgtaaacg taactttagc ttgtacggaa tgtggtgaca gaaactacat tacaactaag
    10861 aacaaaagaa ataatccaga acgtgttgaa atgaagaaat tctgttcacg tgaaaacaaa
    10921 caaactttac accgtgaaac aaaataatca ttaaaattaa atttaaatta acaataaaaa
    10981 aggtgaaatc tcaaaataag aggtttcacc tttttaattg tgcacacgta tgaaatgata
    11041 aaagattttc aattgaaata ataaatttta gaattgtcgc ataattcatc atgacaacat
    11101 aatgacatgt attgttatta acgatataat agaattgaat aaagtgggtg ataatgtgac
    11161 taaaaatgag attagaaaat acattttaca taaaatgaag aattttaata aggctgaaaa
    11221 gcgaaaagca gacacatggt taagaaatca attttttgca actgaagaat ataaagaagc
    11281 aaacgcaatt gcgctagttc tttcttttaa tcatgaagta gatacttttt ctattattga
    11341 acaagcctta atggatcata aacgtatttt tgtaccgaaa atggattatt taaatcatca
    11401 aatgactttt aaagagatat ttaatctcaa agatattgat gtcgataata agggggttta
    11461 ctatccaact tcaaaaggtg aaacaacgaa taacctagat ttaattgttg ttcctggtgt
    11521 tggatttcaa gacgatggat atagaattgg gtatggtggt ggctattacg acaggttttt
    11581 agctaattat cagacaaaga caataagctt attatacgat tttcaaataa catcatttga
    11641 accggaatca ttcgatcaac cagtcgataa attgattata tatcaatcag catagtggag
    11701 gactaaatga acatagacaa acaattttgg aaaacaatat attattggat taggtacttg
    11761 aattttgata ttgtcagtag ggaaaaagat gaccaagaaa tttggttagc ccataaaaga
    11821 aaaaaacaag tagtcatttt taaacaacat atcaagtcta cccaagaaat acgttttgac
    11881 aaagcgaaag tgcttgaaca caaagatgaa atagcaaatt ttatttcttt cgaaccacaa
    11941 agttttgaat tttattattt tacagaatcg gaattttcag aagaacaatt aaatgaagtt
    12001 tcgccaatta gaattaaatt caatgttata agacacacaa aagatttggt aaagcatatg
    12061 ccgaatatat ttttggctag acttatttca gaagataatg ataaaaagac atatatgttc
    12121 tataaacgca aagtattaac cgataacttt ttagataaat atatgcagaa attttcaccg
    12181 gcaacataca caataatatt tgtaaatgtc ttaatatggt tatgtatgat tttatattta
    12241 aataattttt cggatgtaaa attattagat gttggcgggt tagtgcattt taatgtcgta
    12301 catggtgaat ggtatcgaat tgttacatcg atgtttttac attttagttt tgaacatata
    12361 cttatgaata tgctttcatt atttattttt ggtaaaatag tcgaagcaat tattggttca
    12421 tggcggatgt taactgtata ctttattgca gggttgtttg gaaactttgt atcactatca
    12481 tttaatacga ctacaatttc agttggggct agtggtgcta tatttggtct gattggatca
    12541 atttttgcga tgatgtatgt ttcaaaaaca tttaacaaaa aaatgttagg gcagttatta
    12601 attgcattag tgatattagt tggtgtttct ctgtttatgt caaatataaa tattgtggcg
    12661 catattggag gattcattgg tggtttatta ataactttaa ttggctatta ctataaagtg
    12721 aatcgtaata ttttttggat tttactaatt ggtatgcttg ttatatttat tgcacttcaa
    12781 attagaattt ttacaattaa agaagataat atttataata aattgatcaa agatgatatg
    12841 actagtggta attatgataa tgctcaaaat attgtgaagc agacaataaa taaaaattat
    12901 gccgatgatc aaacatatta tttaagtggt atgattatgg ctactatcaa ttctaagtct
    12961 gaaggtatga cagaatggga gcgaggactt agaatgtttc ctaaatcagg tttattaaat
    13021 tttgagttag cgatagcaaa tcgttcatta aatgatgatg aaaaagcatt aaaatatgtg
    13081 cgtaaagcat taaatacaga ccctaaaaat acagattata ttaacttaga aaaagagttg
    13141 actaaatcaa atgagtcgaa aaataaataa cttttatgat gtacaacagt tattgaaaag
    13201 ttacggtttt ctaatatatt ttaaaaatcc agaagatatg tacgaaatga ttcaacagga
    13261 gatttcatca ttgtatcaat atgaactgtt atctaaggaa gaatatttga aatgtacgtt
    13321 gataattaat cagagaagga atgaacagaa atgacaaaaa ttattttagc agctgatgta
    13381 ggcgggacga cttgtaaatt aggtattttc acacctgaat tagaacaatt acataaatgg
    13441 tctattcaca ctgatacatc tgatagtaca ggatatacac ttttgaaagg aatttatgat
    13501 tcgtttgttg aaaaagtaaa tgaaaataat tataattttt caaatgtact tggcgtaggt
    13561 attggtgttc caggtcctgt tgactttgaa aaaggtacag taaatggagc agtaaactta
    13621 tattggccag aaaaagttaa tgtacgtgag atttttgaac aattcgttga ttgtccagtg
    13681 tatgtagata atgatgctaa catagctgct ttaggggaga aacacaaagg tgctggtgaa
    13741 ggtgccgatg atgttgttgc catcacactt ggtacaggtc taggtggagg aattatttca
    13801 aatggtgaaa tcgtacatgg tcataatggc tctggcgcag aaataggtca ttttagagca
    13861 gacttcgatc aacgatttaa atgtaattgt ggtcgttctg gatgtattga aacagttgct
    13921 tcagcgacag gcgttgttaa cttagttaac ttctactatc cgaagttgac gtttagatct
    13981 tctatattag aattgattaa agaaaataag gttacagcaa aagctgtttt tgatgcggca
    14041 aaagctggtg accaattctg tattttcatt actgaaaagg ttgcaaacta tattggatat
    14101 ttatgtagta ttattagtgt tacaagtaat ccgaaatata tcgttttagg tggaggaatg
    14161 tctactgcag gacctatttt aattgaaaat attaaaacag aatatcataa tttaacattt
    14221 acacctgctc aatttgaaac tgaaattgtt caagcgaaat taggtaatga tgcaggtatt
    14281 acaggagcag caggattaat caagacctat gtattagata aagagggggt aaaataatgg
    14341 ctattgttga tgtggttgtt attccagttg gaacggaagg tccgagtgtt agtaaatata
    14401 ttgcagatat tcagaaaaaa cttcaagaat ataaagcgat gggtaaaatt gactttcaat
    14461 taacaccaat gaatactcta attgaaggtg aattaagcga tgtattagaa gttgtgcaag
    14521 tgatacatga attacctttt gataaaggtt taagtagagt ttgtacaaat atccgtattg
    14581 atgaccgacg agacaaatct agaaaaatga atgataaact aacatcagta caaaaacatt
    14641 tagaaaatag tggtgaaaac ctatgaggat ttcaagctta actttaggct tagttgatac
    14701 taatacgtat ttcatcgaaa atgacaaagc tgttattctg attgaccctt caggtgaaag
    14761 tgaaaaaatt attaaaaaat taaaccaaat aaataaaccg ttaaaagcta ttttattaac
    14821 acatgcacac tttgatcata tcggagcagt cgatgatata gttgatcgat tcgatgtccc
    14881 ggtttatatg catgaagcag agtttgattt tctaaaagat cccgttaaaa atggggcaga
    14941 taaatttaag caatatggat taccaattat tacaagtaag gtaactcctg aaaagttaaa
    15001 cgaaggtagc acagaaatag aaggatttaa gtttaatgtg ttacacacac ctggacattc
    15061 accaggaagt ttaacatatg tgttcgatga attcgcagtt gttggagata cattatttaa
    15121 taatggaatt ggacgtacag atttatataa aggtgattat gaaactctag ttgattctat
    15181 tctagataaa atatttgaat tagaaggcga tttaccttta ttccctggac atggtccata
    15241 tacgacggtt gatgatgaac aattaaatcc atttttacat ggttaaattg aagtaataaa
    15301 aacacctcct acgtgattat atgtaggagg tgtttttttg aagattctat ttcaagaaat
    15361 aattaataaa gcgatagaaa tgaaagcgag tgatgtacat tttattccag ttaaaaatga
    15421 agtaagtatt aaatttagaa ttaatgataa cttggagcag tatgaacaaa ttgggaatgg
    15481 catttatcaa aagttattag tttatatgaa gtttcaagct gggcttgatg tttctacaca
    15541 gcaagtcgca cagagcggtc gatatagtta ccatttcaat aaaatttatt ttttgagaat
    15601 atcaacatta ccattgtcac ttggccaaga aagttgtgtt atcagaattg tacctcaatt
    15661 ttttcaacaa cagaaatcaa cttataaatt caatgatttt aaacacctca tgaacaagaa
    15721 acaaggatta ctattgttta gtggaccaac tggttcagga aagagtacat taatgtatca
    15781 aatggtctca tacgcgaata aagccttgaa tttaaatgta atttctatag aggatcctgt
    15841 agagatgcaa attcctggta ttgttcaaat taatgtgaat gataaagctg gcattaacta
    15901 tgtaaattcg tttaaagcta ttttaagatg tgatcccgat gttattttaa taggtgaaat
    15961 cagagataaa gatgttgcca agtgtgttat acaggctagt ttaagtggtc accttgttct
    16021 gactacattg catgcaactg attgtaaagg tgctatttta aggctattag aaatgggtgt
    16081 ttctgtacaa gaattgatac aggcaactaa cttaattata aaccaacgac ttgtaactac
    16141 tattaagcaa cagcgacaat tagtatgtga aattctatct cagcaacaac tccgatattt
    16201 cttttcccat aatcattcat taccatcatc atttaagaac ttagaagata aacttgatga
    16261 tatgacaaaa gcaggtgtca tttgtgaaac tacaatggat aaatacattt aaactacatt
    16321 ctaagaagcg acaattaagt aaggcccaac aaatcgattt acttttaaat ttatgtaatt
    16381 tgttgaaata tggtttcact ctgtatcaaa gttttcaatt tttaaatctt caaatgacat
    16441 ataaaaataa gcaattaggc accaccattc taagtgaaat ttcaaatggt gcaccatgca
    16501 accagatatt atcactgata ggttatagcg atactatcgt catgcaagta tatttggcag
    16561 aaagatttgg caatatcata gacgttctag aagaaaccgt aaattatatg aaagtgaata
    16621 gaaagtcaga acaacgattg ttaaagacac tgcaataccc cttaatacta gtttcgattt
    16681 ttattgctat gattattata ttaaacctca cagtaattcc acagtttcaa caattatata
    16741 cttctatgaa tattcaacta tcttcttttc aaaaaacatt gtcttttttc attaccagct
    16801 tacctactat aattgtagta atgctcataa tagtatctat gttggctatt attatgaaat
    16861 taatttataa caaattaaat atgctcaata agataaactt tgtgatgaaa ctaccgctaa
    16921 tatcgggcta tttccaatta tttaaaactt attttgtaac taatgaatta gtgttatttt
    16981 ataaaaatgg tattacactt caatcaatag tagacgttta tattaaccat agtagtgatc
    17041 catttagaca gtttctaggt aaatacttat taacttattc agaaatggga tatggtttac
    17101 ctcaaatttt agaaaaacta aaatgcttta agcctcaatt aattaagttt gtgctacaag
    17161 gtgaaaagag aggaaagcta gaagtagaac taaagttata ttcgcaaata ttagtaaaac
    17221 aaatagaaga taaagcgata aaacagactc agtttttaca gcctatttta tttttgattt
    17281 taggtttatt tattgtcgca atttatttgg taattatgtt accaatgttt caaatgatgc
    17341 aaagtataaa ataatggagg ttaatatatg tttaaatttc ttaagaaaac tcaagcgttt
    17401 acattgatag agatgctatt agtgttatta atcatcagtt tattattaat tttaatcatt
    17461 ccaaatattg ctaaacaaac tgctcacata caatcaacag gttgtaatgc acaggtaaaa
    17521 atggttaata gtcaaattga agcgtatgca ttgaaacata atagaaatcc atcgtctatt
    17581 gaagacttaa ttgcagatgg ttttataaaa gaagcacaaa agacatgtaa atcaggagag
    17641 acaatcacaa ttagtaatgg agaagcagtt gcaaattaga aagcagtcag catttactat
    17701 gattgagata cttgtggtaa tgatgttaat cagtatattt ttacttttga caatgacatc
    17761 taaaggatta agcaatctta gagtaataga tgacgaggca aatatcattt ctcttattac
    17821 tgaattgaat tatattaaat cgcaagctat agcaaatcaa ggatatatca atgttagatt
    17881 ttatgaaaac agtgacacta ttaaagtaat agagaataat aaaatacgat ttctaaaatt
    17941 aaaagtaggc aaaataatta atgttgcaaa agttgatatt attgcctttg ataaaaaagg
    18001 gaa
//
LOCUS       DAKPJH010000051        17920 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.051, whole genome shotgun sequence.
ACCESSION   DAKPJH010000051 DAKPJH010000000
VERSION     DAKPJH010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17920
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.051"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(79..945)
                     /gene="galU"
                     /locus_tag="OY092_001465"
     CDS             complement(79..945)
                     /gene="galU"
                     /locus_tag="OY092_001465"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000721336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HCX1076413.1"
                     /translation="MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEE
                     AARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYV
                     RQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQ
                     EVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLK
                     TQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMR
                     EELTRFIKELGL"
     gene            complement(1125..4172)
                     /gene="fnbA"
                     /locus_tag="OY092_001466"
     CDS             complement(1125..4172)
                     /gene="fnbA"
                     /locus_tag="OY092_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000794614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding protein FnbA"
                     /protein_id="HCX1076414.1"
                     /translation="MKNNLRYGIRKHKLGAASVFLGTMIVVGMGQDKEAAASEQKTTT
                     VEENGNSATENKVNETQTTTTNVNTIDETQSYSATATEQPSNATQVTTEEAPKAVQAP
                     QTAQPANLETVKEEVVKEEAKPQVKETTQSQDNSGDQRQVDLTPKKATQNQVAETQVE
                     VAQPRTASESKPRVTRSADVVEAKEASDEKVETGTDVTSKVTVESGSIEAPQGNKVEP
                     HAGQRVVLKYKLKFADGLKRGDYFDFTLSNNVNTYGVSTARKVPEIKNGSVVMATGEI
                     LGNGNIRYTFTNEIEHKVEVTANLEINLFIDPKTVQSNGEQKITSKLNGEETEKTIPV
                     VYNPGVSNSYTNVNGSIETFNKESNKFTHIAYIKPMNGNQSNTVSVTGTLTEGSNLAG
                     GQPTVKVYEYLGKKDELPQSVYANTSDTNKFKDVTKEMNGKLSVQDNGSYSLNLDKLD
                     KTYVIHYTGEYLQGSDQVNFRTELYGYPERAYKSYYVYGGYRLTWDNGLVLYSNKADG
                     NGKNGQIIQNNDFEYKEDTAKGTMSGQYDAKQIIETEENQDNTPLDIDYHTAIDGEGG
                     YVDGYIETIEETDSSAIDIDYHTAVDSEAGHVGGYTESSEESNPIDFEESTHENSKHH
                     ADVVEYEEDTNPGGGQVITESNLVEFDEESTKGILTGAVSDHTTVEDTKEYTTESNLI
                     ELVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVIEEIEENSHVDIKSE
                     LGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNKGDQSFEEDTEK
                     DKPKYEHGGNIIDIDFDSVPHIHGFNKHTEIIEEDTNKDKPNYQFGGHNSVEYEEDTL
                     PQVSGHNEGQQTIEEDTTPPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSE
                     PETPTPPTPEVPAEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPTKKA
                     QSKKSELPETGGEESTNKGILFGGLFSILGFALLRRNKKNHKA"
     gene            complement(4156..4258)
                     /locus_tag="OY092_001467"
                     /pseudo
     CDS             complement(4156..4258)
                     /locus_tag="OY092_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4641..5999)
                     /locus_tag="OY092_001468"
     CDS             complement(4641..5999)
                     /locus_tag="OY092_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate permease"
                     /protein_id="HCX1076415.1"
                     /translation="MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALML
                     GIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHV
                     QWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLP
                     PHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKVAQKMIPSAYTREGDISA
                     LGAQKEFTDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTA
                     GTAMLIAVLFAIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGG
                     VGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVAL
                     VVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISL
                     FV"
     gene            complement(6116..7669)
                     /gene="gntK"
                     /locus_tag="OY092_001469"
     CDS             complement(6116..7669)
                     /gene="gntK"
                     /locus_tag="OY092_001469"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HCX1076416.1"
                     /translation="MKYMIGVDIGTTSTKSVLYDDNGTFIMKHQIGYDLHTPNVDVSE
                     ENPDELFDAVLMTIKYVMRESKVNKDDIKFVSFSAQMHSLIAMDQKHQRLTNNITWAD
                     NRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLVKIFWMKHEWQDVFQRTAKFADIKT
                     YIFYHLFDTYIIDYSMASATGMFNLETLDWDVGALELLGISKEMLPELVPTTYVMKGM
                     KERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTD
                     YKGRIFCYVLTEDHYVIGGPINNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIA
                     KRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYT
                     VYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGL
                     KAVGDIEDFSIVSSMVGATNNHMPFEENVAVYQELVSIFINLSRSLTENYEQIADFQR
                     QHMAENKTQ"
     gene            complement(7693..8373)
                     /locus_tag="OY092_001470"
     CDS             complement(7693..8373)
                     /locus_tag="OY092_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1076417.1"
                     /translation="MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMA
                     KQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRV
                     KNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHL
                     KPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGK
                     DIEGFWLN"
     gene            complement(8527..9291)
                     /locus_tag="OY092_001471"
     CDS             complement(8527..9291)
                     /locus_tag="OY092_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCX1076418.1"
                     /translation="MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTE
                     QQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLN
                     KIKNVQYYVNKASTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISA
                     ILMKNKWPFLIALPFMIGYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATT
                     RRFECPNCHETHYCIEVPKAHMSTEQLEISRIQHNN"
     gene            complement(9456..10148)
                     /locus_tag="OY092_001472"
     CDS             complement(9456..10148)
                     /locus_tag="OY092_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HCX1076419.1"
                     /translation="MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHI
                     YSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAK
                     EHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSI
                     PVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNNAETEKYRDLLKECATEITEVE
                     DKLQQIHSEITE"
     gene            complement(10379..10795)
                     /locus_tag="OY092_001473"
     CDS             complement(10379..10795)
                     /locus_tag="OY092_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HCX1076420.1"
                     /translation="MPFTMKGYPEKWKDFEVIKRQKAIEIANAMLKEGYLEKDVVPIA
                     AKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDK
                     SYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV"
     gene            complement(10934..12757)
                     /locus_tag="OY092_001474"
     CDS             complement(10934..12757)
                     /locus_tag="OY092_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000586397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCX1076421.1"
                     /translation="MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVII
                     CNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPI
                     NLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLHTYN
                     DKSAFLQVAKTAVDNFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELN
                     AKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHA
                     NEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYW
                     IPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALF
                     TEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLG
                     QRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNA
                     ANGELFSDKTLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLATFENIAK
                     HLELNTELEIKILPDLPQYNYIQSAMMNIQHNSFCERDKNV"
     gene            complement(13667..14944)
                     /locus_tag="OY092_001475"
     CDS             complement(13667..14944)
                     /locus_tag="OY092_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076422.1"
                     /translation="MKEKRTNVRWMFALAFFFIGVIAYMDRANISYIAKQMMDDLGMT
                     KPQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMITIALVWWSAFTILTGMIKNHGLI
                     YLVRFLFGVGEAPMYPSNAVFNSFWFSKNEKGRASSALLAGSYFGPVLAPIVTIAIVN
                     AFNWQAVFYIFGAVGILMAVLWAIIAKDLPEQHRMVNEAEKRFIMENRDIVATEKSSP
                     PWNDFFKRFSFYAIAIQYFVVQFIITLFLIWLPTYLTEVFHVNFKEMSISSLPWLLMF
                     FLILSAGAISDRVLGLGRSKFVARGVIAIAGFIVFAVSIIFAVRTGNLYVSIFWLSLG
                     LGGIGISMGMSWAAATDLGRNFSGTVSGWMNLWGNIGALISPLLAGLFVEHLGWTMTF
                     QLLIVPAVIAVIMWFYVKPDQPLIVSDDKAIEK"
     gene            15491..16102
                     /locus_tag="OY092_001476"
     CDS             15491..16102
                     /locus_tag="OY092_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCX1076423.1"
                     /translation="MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSV
                     KSHLSILTLFIIATIASFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLKRAN
                     DWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
                     TLSDSFGMLMTGLHTYSRIMYVIIIIAVIYFAIRYIGKRKRVK"
     gene            complement(16111..16210)
                     /locus_tag="OY092_001477"
                     /pseudo
     CDS             complement(16111..16210)
                     /locus_tag="OY092_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501275.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16200..17363)
                     /locus_tag="OY092_001478"
     CDS             complement(16200..17363)
                     /locus_tag="OY092_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076424.1"
                     /translation="MTNSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWIN
                     ATVGGFIFIVAVMQIVLGRSIDSRDSKKVLLTGLGIVIISSFICAMTHNFILFAISRL
                     FQAIGCGIIPLVTLTLLAKLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYI
                     GIFSFLLVISIVLFLIIFFIDIPNVEKGIVKLTEKIEEKYLIDKVFITLVTLGFLIFL
                     TYFSILVYLPTLLNNTYDIGVGISGVLFLPITVSVILGSLFYKRLSKKYNEIMILRVT
                     ITGFAIFTLLFGWLNESNVIILSVIIFILGTCVGIVPALLSTIISKRFEHIKGKVLGV
                     FNFVRYIGMTVGALLIGIISHSLVPFYFTTVTIMLIIIFLYIKIGDFQLKFAK"
     gene            complement(17356..17676)
                     /locus_tag="OY092_001479"
                     /pseudo
     CDS             complement(17356..17676)
                     /locus_tag="OY092_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501277.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
BASE COUNT         5457 a         3444 c         2572 g         6447 t
ORIGIN      
        1 ataaattaag catgacactc attcaattta gttcacaatt tcgtgttcca attttattga
       61 gtatcatgct ttttaatgtt ataaccctaa ttctttaata aatcgtgtta attcttctcg
      121 catactgtca tctttcaatg catattctat cgttgtttta acgaagccta atttttctcc
      181 aacgtcataa cgttcgcctt cgaagtcata tgcatacact tggttatcat tattcatacg
      241 ttcaatcgca tctgttaact gaatttcgtt acctgcgcct tctttttgcg tttttaaata
      301 atcgaaaatt tcaggcgtta atacataacg tcccataata gctaggtttg atggtgccgt
      361 accttgtgct ggcttttcaa caaacttttt cacttcatac tgacgtccgt ttttagttaa
      421 tgggtcaata atcccataac gatgagtatc tgcttccgga acttcttgga cacctataac
      481 tgagtgccct gtttcttcat aaacgtcaat caactgtttc actgctggca cttcagattc
      541 aacaatatcg tcacctaata ataccgcaaa tggttcattg ccgataaatt gacgcgcaga
      601 actaatcgca tgccctaaac ctttttgttc tttctgcctt acataaaaaa tattcgcaag
      661 ttctgttgaa tactgaactt tttctagtaa ctcagattta cctttttctt ttaacaccat
      721 ttctaattct ttttgactat caaaatgatc ttcaatcgcg cgtttgtggc gacctgtcac
      781 tataataata tcttcaattc cagctcttgc agcttcttca acgatatatt gtattgtggg
      841 tttatctaag ataggaagca tttcctttgg catcgcttta gttgctggta aaaatctagt
      901 ccctaaacca gcagcgggaa tgattgcctt ttttattttt ttcaaagtta atgtgctcct
      961 tttcctaagt attaaatcta tgtatcaacg tcattttaac actaattaga acgccttcat
     1021 agtgtcatta agtatgtaat tatttcttgg gaaatttgat ttaattttaa aaaacaggct
     1081 tacttcatat aatttatgaa ataaacctgt caattttaga ttgattatgc tttgtgattc
     1141 tttttatttc tgcgtaataa tgcaaatcct aaaatactaa acaatcctcc gaacagtata
     1201 cctttgtttg ttgattcttc tccacctgtt tcaggtagtt cagatttctt agattgtgct
     1261 tttttagttg gtgccactgc tttaaccttt tcattgattt caatgacagg tgttactacc
     1321 ttaccttgtt ccactggttt agaaggcttt ttaggttctt ctttggcagg tggtactggt
     1381 ttaccaggtt cagctggtac ctctggcgtt ggtggtgttg gtgtttccgg ctcacttggt
     1441 acctctggtg ttggcggtgt tggtgtttcc ggctcacttg gtacttctgg tgtcggtggt
     1501 gttggtgttt ccggctcact tggtacttct ggtgttggtg gtgttggcgg cgttgtatct
     1561 tcttcaatcg tttgttgacc ttcattatga ccacttactt gtggaagtgt atcttcttca
     1621 tattcaacac tattgtgtcc accgaattga taatttggtt tatctttgtt tgtatcttct
     1681 tcaataattt cagtgtgctt attgaatcca tgaatatgtg gcacgctgtc gaagtcgata
     1741 tcaatgatat taccaccatg ttcatattta ggcttgtctt tctctgtatc ttcttcgaat
     1801 gactgatcac ctttattttg accatgaatt tgaggtacac tatcgaaatc gatatctacg
     1861 atattgccac cttgttcata tttaggttta tcttcttctg tgtcttcctc gaatgactgg
     1921 ttaccgctat tttggccacc ttcataacct aattcactct taatatcaac gtggctattt
     1981 tcttcgattt cttcaatcac accataattc ccgtgaccat tttcagttcc taaaccagaa
     2041 tgagaaatat gatgattgtt ttcagtaatt tcctcgattg gtccttgtgc ttgaccatgc
     2101 tcttcaggta attcatctac tagttcaatc agattacttt cagtcgtata ttctttcgta
     2161 tcttcaactg ttgtatggtc gctcactgcg ccagttagaa taccttttgt agactcttcg
     2221 tcaaattcaa ctaagttaga ctcagttatt acttggccac cacctgggtt tgtatcctct
     2281 tcatattcaa caacatcagc gtgatgtttt gaattttcat gtgtcgattc ttcaaagtca
     2341 attggatttg attcctcaga ggactcagtg tatcctccaa cgtgacccgc ttcactatcc
     2401 acagcagtat ggtaatcgat atcaatagct gatgaatccg tttcttctat tgtttcaata
     2461 tacccatcaa cataaccacc ctcaccatct atagctgtgt ggtaatcaat gtcaagcggt
     2521 gtattgtctt gattttcttc tgtttcaata atttgcttgg catcgtactg cccgctcata
     2581 gttccttttg cagtatcttc tttatattca aaatcattat tttgaataat ttgtccattt
     2641 ttaccattgc cgtcagcttt attgctatat aaaactaaac cattatccca agttaaacga
     2701 tatcccccat aaacatagta agatttatat gctcgttctg gatacccata taattcagtt
     2761 ctaaaattaa cctgatctga cccttgcaaa tattcacctg tataatgaat gacatacgtt
     2821 ttatccaact tatctaaatt caatgagtaa ctaccattgt cttgcacact caattttcca
     2881 ttcatttcct ttgttacatc tttgaatttg ttagtatctg atgtatttgc ataaacactt
     2941 tgtggcaatt catctttttt ccctagatat tcatatactt taacagtagg ttgtccacca
     3001 gctaaattac taccttcagt caacgtccct gttactgata cagtgtttga ctggtttcca
     3061 ttcattggct taatataagc tatatgtgta aatttattag attctttatt aaatgtttca
     3121 attgatccat ttacatttgt ataactattg ctaacacctg gattataaac aactggtatt
     3181 gttttttctg tttcttcacc atttaattta gaagtaatct tttgttctcc attgctttgt
     3241 acagttttag ggtcaataaa taagttgatt tctaaattag ctgttacctc taccttgtgt
     3301 tcaatttcgt tagtaaatgt atatcttatg ttaccattcc ctaagatctc acctgtagcc
     3361 attacaactg agccattttt aatctctggt acctttctag ctgttgaaac cccataagta
     3421 tttacattat ttgataatgt aaaatcaaaa taatctcctc tttttaatcc atctgcgaat
     3481 ttcaatttgt atttcaatac gacacgttga ccagcatgtg gctctacttt atttccttga
     3541 ggtgcctcaa tagaaccact ttctactgta actttacttg tcacatctgt acccgtttcc
     3601 actttctcgt cactagcttc cttagcttca actacgtctg ctgatcttgt cacacgtggt
     3661 ttactttctg atgccgttct tggctgtgcc acttcaactt gtgtttctgc gacttgattt
     3721 tgtgtggcct ttttaggtgt taaatctact tgtctttgat ctccgctatt gtcttgagat
     3781 tgtgttgttt ccttaacttg aggtttcgct tcttccttaa ctacctcttc tttaactgtt
     3841 tctaaatttg ctggttgtgc agtttgtggt gcttgtactg cttttggtgc ttcttcagtt
     3901 gttacttgtg ttgcgtttga cggttgttct gttgctgttg cgctgtatga ttgtgtttca
     3961 tctatagtat taacgttagt tgtagttgtt tgtgtttcgt ttactttatt ttcagtagct
     4021 gaattcccat tttcttctac tgtagttgtc ttttgttctg atgctgcagc ttctttatct
     4081 tgtcccatcc caacaacgat cattgttcct aagaatactg atgctgctcc caatttatgt
     4141 tttctaatgc cgtacctaag attgtttttc actataatat ctccctttaa atgcaaaatt
     4201 cattaatttt tttaaactta ataaatgcaa gtctatattg ttcggttttt aaaagcaata
     4261 caaaaaagcg agttaatgaa aagttaagat tgtcattaat tttatgttaa ttgataattt
     4321 tattatttga aatataccta taaattgtat tcaagtcatc ataaaccctt gtcacacaag
     4381 gcttgtattt tttatactta tttttcaaat taaattcatc attatctaat ttaaaacaat
     4441 atactaagcg tttcataatt atcgcctgta caatacgcac aaaaacatgt cttgaaacgc
     4501 ctttcattac actaaaatcc ccaatatact ttttatatcg ttcggattct gactatttca
     4561 gacgattttc tgcataaaaa taaacgtgtt tcaaggcaat atattgcaat taccttaaaa
     4621 cacgtttact taatatttag ttaaacaaat aagctgatga atagaatgaa gatgatacct
     4681 gaaacggaaa taatcgtttc taataatgac catgttaaga atgtttcttt tacagttaaa
     4741 ccaaaatatt ctttaaacat ccaaaatcct gcgtcattta catgagacaa aatcacacta
     4801 cctgcaccta tcgcaagtac aactaatgca acatttacat ctgatgattg taataatggt
     4861 aagacaatac ctgtagttga aatcgcagct actgtagccg aacctaatgc gatacgtagc
     4921 acagctgcaa caatccatgc tagtaaaatt ggagacatct ctgtaccttc aaacatttta
     4981 gcaattgtat ttccgacacc accgtcaatt aatacttgtt taaatgtacc gccaccgcca
     5041 ataatcaata acatcattcc gattggataa atcgcattcg tcactgattc cataatatga
     5101 ttcatcttac gttttctcat taatcccatc gtaacgattg caaataatac tgctattagc
     5161 atggctgtcc ctgctgttcc tatcatataa atgatagatt caaatagatt tgtaggtttg
     5221 tcgtgcccag ttacaagttg cgttatcgta gacactaaca ttaatatgac tggtaatgtt
     5281 gcagttaata aactcatacc aaatcctggc atctcttgat ccgtaaattc tttttgtgca
     5341 cctaacgctg aaatatcgcc ttctcgtgta tacgcagacg gaatcatttt ttgtgcaact
     5401 ttgttaaata taggtcctgc aatgagtgta actggaatgg caataatcat accgtacagt
     5461 aatacatctc caacatttgc ctttaattct tttgcgatga ctaccggtcc tggatgtggt
     5521 ggtaaaaagc catgtgtcac agataaagct gttaccatag gtagtcctag ttttaacact
     5581 gaaacatttg cgcgttttgc tactgtaaat actaatggaa tcagtaagac taaacctact
     5641 tcaaagaaca atgcaatacc gacgataaat gctgcaacaa gcattgccca ttgtacatgt
     5701 ttttgaccaa atttttgaat caacgtgtct gcaattcgag ttgcaccacc accatcagca
     5761 agtaatttcc caagtatggc acctaaaccg aatattagtg caatgtggcc gagcgtactg
     5821 cccatccctt tctcaatcgt ctccataatt ttagtcaatg gtatacctag cattaacgct
     5881 gtaatcatcg atgtgataat taatgaaata aatgtattta atttaaaccc aataattaat
     5941 actaataaaa taacgatacc taaaacaaca ctgattaacg gccatatttc gttaaacatg
     6001 acattcccct ctttctcttt tcaatagaat gtaacaccgt cgtcgcgcac gtattccaca
     6061 taatatatag tagtcatggc acaacaactt tatctaagat gcttaagtga cgtatttatt
     6121 gtgttttatt ttcagccata tgttggcgtt gaaaatctgc aatttgttca taattctctg
     6181 ttaaagaacg acttaaattg ataaaaatgg atacgagctc ttggtaaaca gcgacatttt
     6241 cttcaaacgg catatgatta tttgtagcac cgaccatcga tgaaacgatt gaaaaatctt
     6301 caatgtcacc tacagcttta agtccaagca cgcaggcacc taagcatgaa ctttcatagc
     6361 tttcaggaac cactaactct gtgtcaaata tatctgacat catttgacgc catacttcac
     6421 ttttcgcaaa accacctgtt gcttttatca tcttaggcgt ttcattcatt acttcaatga
     6481 gtgcaaggta gacggtatac aaattgtaaa gaacaccttc taatgcagcg cgaatcatat
     6541 gttctttttt atgagataaa gttaaaccga agaatgaacc tcttgcattt gcgttccaaa
     6601 gcggtgcacg ttctccagct aaatagggat ggaatattaa accatctgca cctggtttaa
     6661 cacgctttgc aatttgagtt aagacatcat aaggatcaac accgagacgt ttcgcagttt
     6721 cgacttcact cgctagcaac tcgtcgcgca accatctcaa tacgacacca ccattattta
     6781 taggacctcc gatgacgtag tggtcctctg ttaagacata acaaaatatt ctacctttgt
     6841 aatcagtacg cggtttatct atcacagtac gaatcgcccc agatgtaccg attgtgacag
     6901 caacttctcc tttaccaacg ctattgacac ccaaattaga aaggacccca tcactcgcac
     6961 caataacaaa cggtgtatct tcattaagcc ccattaatgt tgcataacgt tctttcatgc
     7021 ctttcattac gtacgttgtt ggcactaatt ccggcaacat ttccttggaa ataccaagca
     7081 attctaatgc cccaacatcc caatctaatg tttctaaatt aaacatccct gttgcggaag
     7141 ccattgaata atcaatgata tatgtatcaa ataaatgata gaaaatgtat gttttaatat
     7201 ctgcaaactt agcagtacgt tgaaatacat cttgccattc atgtttcatc caaaaaattt
     7261 tcactaaagg cgacatagga tgaataggcg tacctgttcg ctgataaatc gcattgccat
     7321 catgcacttc atttattact gttgcatatt ttgcagcgcg gttatctgcc caagtaatat
     7381 tatttgttaa tctttgatgt ttctgatcca tcgcaatcaa gctatgcatt tgcgcactaa
     7441 atgacacaaa tttaatatca tctttattaa ctttggattc tctcataaca tatttaatag
     7501 tcattaatac cgcatcaaat aattcatctg ggttttcttc tgagacatca acgtttggtg
     7561 tgtgtaaatc atagccgatt tgatgtttca tgatgaatgt tccattgtca tcatataaga
     7621 ctgacttggt actcgtcgtt ccaatgtcga caccaatcat atatttcatg acaaatcctt
     7681 ctttctttca ttttaattca accaaaatcc ttcaatatct ttaccaacat cgtcgaaatt
     7741 taagtgaaac gcttctttca aaatttgact gtcgtattgt tccactgcat caataaacac
     7801 ttgatgatta tgatgtatgc gttcaaaatc ttgcgggttc tgttgcatac gttgtcgcat
     7861 ggatgttaaa acgagtgcca tcattactgg ttttaaatga ctccaaaatg agtttaaata
     7921 ttgatgatta gatgctttga ttaatgtttc atgaaattca aagtcatgct tcgtaaatga
     7981 ttctgcatcc tcaaatttta ctgccacttt catcatttca agttgtttct tcatttcttt
     8041 tacgataggt agtcgctctt gatttttaac tcttgaaaat gcaaaagact ctagcatcag
     8101 tcgcaaatcg tacatttctt tcttttcttg ttccccaaac ggcaacacat gtgcacccat
     8161 tctttctaat tggatgagtt gattttgttg caataattta aatgcatctc gaattggcga
     8221 acgactcaca ttaaattgct ttgccatttg attttcagtg agtaacgtac cttcagctat
     8281 gtgaccattc acaataccta agcgtaattc tgccgcgata ccttctccag ttgtcatacc
     8341 ttccaaccat ttctctggat atccatacat catcaaagcc actccttcat tacacgacat
     8401 acttgtatac aagtatgtta atatagttct taatcgtttg caagcgcttt ctttacgcgt
     8461 actaaaatag cgaccacccc ttttcgatgt aagtttaaag ggaatggtca ctatcacacg
     8521 aataatttaa ttgttatgtt gtatgcggga tatttctaat tgttctgtac tcatatgcgc
     8581 tttaggtact tcaatgcaat aatgcgtttc atgacagttc ggacattcga atcgacgtgt
     8641 tgtcgctgta tgtttcgctt tgataactgc ccacaaagat ggtgagaata tatgctggca
     8701 gttaggacat aaataggcaa ccttttgttg gtaataaaaa gtaacaccaa tgccgtatcc
     8761 aatcataaac ggcaacgcaa ttagaaacgg ccatttattt ttcatcaaaa ttgcacttat
     8821 aatgctagaa tattgaatta ttcctataat acccgcacta atccaaatgt tacgacgaat
     8881 acttttcatt tcagctgatt tactcatgac atgctctatg tcttttaaat gtgtgattgg
     8941 agacgtcgac gctttattta cgtaatattg aacattttta attttgttta ataccgcttg
     9001 ttgctgtttg acttgttgat taatttcttg ttgtttcata gttagtaaag tattgagtgt
     9061 cttcaaagta ccttcacctt ttagcaacat atctatatcg cttaacgcac aacctaaatc
     9121 tttaagcaat aagattaact ctaatgtttg tcgctgttgt tctgtataca cacgacgctt
     9181 tccttctgta aatccttgtg gtttcaaaat acctttgcga tcataatatt gaatcgttcg
     9241 cgttgtcaca ttgcataatt tcgcgagttc tccagtcgaa tagttagaca tagattccac
     9301 ctcctacaat caccatagtt gatgacccga cgtcacgagc aagtactttt tctacatttt
     9361 aaagaaattt attatactag gcgtcttatt tttgtgattt cgtaccatgt tgatttacaa
     9421 aatcactcaa attaagcaac actactacta aacgtctact ctgttatttc agaatgaatt
     9481 tgttgtaatt tatcttcaac ttcagtaatc tctgtcgcac attctttcag taaatctcga
     9541 tacttttccg tctctgcatt gtttttataa cgtattttat gttctaaact tgcccacata
     9601 tccataccta tcgttctaat ttgaatttca acaggcaata cctcaacgcg ttctgctaaa
     9661 aagactggaa tggatacaac gatatgtaaa ctgcggtaac cattttcttt agggtgctga
     9721 atataatctt tacgttttat caattgtacg tcttcttgtt taagcaacat ctcttcaatc
     9781 aaataaatat catctaagta attacatact acgcgaattc cggcaatatc cagtatatgt
     9841 tctttggcag tttctgcgct aatctgtaat cctttacgat taagcttttc tattaaactg
     9901 cgcatttctt tcacacgtcg ctccatatga tgtatagggt tgtgtttata aatgtgattg
     9961 aaattatcgt ctaaaatact cagtttagtg cttatttcct ttagtgctga cgaataaata
    10021 tgatctaact ctacgaaacc taataacgta tcaaatgctt catcaccatt ttcaaattta
    10081 cttaaactat ttttaaaatc atgtcgcaaa tcctctaaat atagtgatgg ttttcgatct
    10141 acatacattt ttatactaac ctccgatata taatcatctt tattgtacct aacattttat
    10201 taagataata ctaatacact atcgaacttt gggctgatac tgaaacagca caaagaaact
    10261 caaacaattc gaattatgta tcaaaacctt caattatagg aagtaatttt aaaatgattt
    10321 aacgcaaaaa aacacctgtt accgttatat aggtacaagt gtttaattga tagagatgtt
    10381 atacgtcttt aaatgattcc acaacttttg gatgtggacc atccataagc ggttctcttt
    10441 gtcgaacgcc accactttgg ttgccaattg attcgctatc aaagtacgat ttatcttgat
    10501 ttgattgttc ttgaatatgt tcttcattat cagttgttgc atattcacta tccacctctg
    10561 ttttttccat tgttgctgta tggaattgta cgaagttctc ttcttctaat gctttgattt
    10621 cttctttcga taacgctcga taccaatctt tcgctttttt cgccgcaata ggaacaacat
    10681 ctttttcaag atatccttct tttaacattg cattcgcaat ttctatcgct ttttgccgtt
    10741 taattacttc aaaatctttc catttttcgg ggtaaccttt cattgtaaag ggcatttcct
    10801 taacctccaa tatgttataa ttcatgttat ataccaccat aattataaaa tgaaacatat
    10861 taaacacaat tttttagact cccgtcataa taacttcaga caaacgttag tctgacctga
    10921 taaatatttt attttaaacg ttcttgtctc tctcacaaaa actattgtgt tgaatattca
    10981 tcattgctga ttgaatataa ttatactgtg gtaaatctgg taatatcttt atttctaatt
    11041 ctgtatttaa ttctaaatgc ttagcgatgt tttcaaatgt tgctaaatac tcgcccatta
    11101 attgttcatt tattgtaagt ctatcttcat tagccatggc tctatttaac ataaagctaa
    11161 tttcttctaa tgcgaataag ctaggataat aattttgaat caatgtctta tcactaaata
    11221 attcaccatt agctgcatta taaacttgcg tcatgttatt taatttcaca gataggttca
    11281 tagccgtgtt tttctgatac acatcatctt tatattggtt ttcagaaaac aaataatgga
    11341 agagcgttgc ttctttacga acaacttcag ccattacatt aggaagcaat gcggatgcgg
    11401 tacgttgtcc aaggacaaat aaacctatga ttgcaatcac aatacccatt gcaacgtcaa
    11461 taactcttgg aaacgcaatg ttaattgtta aattctgtga tgctaatcca ttcattaaaa
    11521 taacttgtat tgtaataaaa actactgcaa tcgcataatt tgctcccacc aatgcttcag
    11581 taaacaatgc tgcaatgccc attaaaatta ctgcaacagg tgttggtatt gaaaacaaca
    11641 atatgactga aagtactaac acacctaaaa tagtacctaa acctcgtgcc atacctctct
    11701 cgattgcatg tatagttgat gttcctagta atattgtatg tgcagataac ggtatccagt
    11761 atgctttttc aaaatcaaac attaacgcaa taaatatcgc tatcatcata atcgctgtat
    11821 atctcaatgt atttctaaaa acaatagagt ctaatgttaa attttgataa atgcgtttac
    11881 tatataaagg ttttcgcatg tctgcttcat acgcaatacg cgcttcattt gcatgcacca
    11941 tttcatcaat tttcaatata tggttgaata aattttgaaa ttcctctgtt actgtcactt
    12001 cttttcgcca atatcttaca ttttcctcac tattatctag ttgtgcaatg atatgatcca
    12061 tcatttcaat taactcatct ggcaatggtc gaatttgttt agcgttcaac tctaacagtt
    12121 cagaataaat cccttgggca gatgtgtgta ataataataa tttttggaaa cgtctactta
    12181 atttatcgtt acttgaagta gaagtgatta ataatttatc agatgcttta aaattatcca
    12241 ccgctgtttt tgctacttgt aaaaatgcag atttatcatt ataagtgtgt aacaacttag
    12301 atatgagttt aaaatcattt tgaattgctt gttcttcagc tttgttttta gaaaatacga
    12361 tcgtgattaa caccatcata gtggcaagta taccgcctac taaaatcgca aagcctctat
    12421 ataatgcttc ttcgggagct ataggtaagt taatgggtag actgaatgtc acaatgaaga
    12481 atgtcgatga cggtccagct atttttaagg cagtaaatat ataaaatggt ataaccgtaa
    12541 caattaataa tgtcattcca aaaacgagtg gcgttttggc tgttagcgta ccaagcatca
    12601 tacatattgc aaacgctaaa ttacaaatta ttacagttcg cagcttagat cgcgacggac
    12661 ctttaaaaac ataaatatgg gctagtgttc cggttgcaac taataatcca aattggaaat
    12721 taccacataa gtaaccgatt attgcgggaa taatcattaa cagtccctgt cttacacctt
    12781 tataaaagtc taagttaagt cgattgattt ttatgagtga tgtcaaaaag atgtcatttc
    12841 gacttctcct ttccttgtca aaatatttcc ataatctttt tattagcata gttaaaatga
    12901 atttgttgct ataaatttta attacgcaac atatgtcatt ataacacctt atgctcaatt
    12961 atctaaattt aaaaactttt aaagtccaat taaaattaat ttctaatgtt atttaacatc
    13021 gttgaacctt tggtcgccca cctttgcgct agttaaaatt tatttgtgac atgttgaaat
    13081 tattttagcg aattatacat ttagggttag aaaaacattc acatagactt agtgtctatt
    13141 tacttcatat tattcctagg gttcaagatc caaactatag taaatttaag aaagtttata
    13201 aaacatattt gcttcataag cttgaatagt tcctatattc gttatttaaa atgacattcg
    13261 atgtcagttc attttttaaa atatcgaaag atgcttacgt ataatatata tagtgacgta
    13321 tttacaaata atggcagtaa gcagtacaaa atgattacac aaaaatttcc ttctactcga
    13381 taaattaaga agaataaact aattaaaaaa atacttataa ttagacctat aagaggcaaa
    13441 cttctaatat atttctctaa gttttccttc atatttataa cctcctaaaa tttatatgta
    13501 cttttataag cgttacctga ctaatgtttt aaaactttat ttctttacat acatcatttt
    13561 aataacttct ctttcatctt aaaccatatc tgttttaaaa agtttcaatt tcaacgtaaa
    13621 aaaagcaata agccccaaca atgtgaaagc ttactgcttg tttaaattat ttttctattg
    13681 ctttatcatc actaacaatt aaaggttgat ctggtttcac atagaaccac ataatcacag
    13741 cgattactgc tggaacgatt aacaattgga atgtcattgt ccaacccaaa tgttctacga
    13801 atagacctgc taatagcgga ctgattaatg cacctatatt accccataag ttcatccacc
    13861 ctgatactgt accagagaag ttacgtccta agtcagttgc tgcagcccaa ctcataccca
    13921 ttgaaatacc gataccacca agacctagtg ataaccagaa aatacttaca tataaatttc
    13981 ctgtacgtac agcaaagata attgaaactg caaacacaat aaatcctgcg attgcaatta
    14041 cacctctagc tacgaatttt gaacgaccta atcctaatac acggtcagaa attgcacctg
    14101 ctgataagat taagaagaac attaataacc aaggtaatga actaatgctc atttctttaa
    14161 agttaacgtg gaatacttct gttaaatacg tcggtaacca aattaagaat aatgtaatga
    14221 taaattgtac aacaaagtat tgaattgcaa ttgcatagaa gctaaaacgc ttaaagaaat
    14281 cattccatgg tggtgatgac ttttcagtag ctacgatatc acgattttcc ataatgaaac
    14341 gtttctccgc ttcattaacc attctatgtt gctcaggtaa gtctttggca ataatcgccc
    14401 ataatacagc cattaaaata cctactgcac caaaaatgta aaatactgct tgccagttaa
    14461 atgcgttaac aatagcaatt gtaactattg gtgctaatac aggtccgaaa tatgatcctg
    14521 ctaataatgc acttgatgct ctaccttttt catttttaga gaaccaaaat gagttaaaca
    14581 cagcattaga agggtacatt ggcgcctcac ctacaccaaa taagaatctc actaaataaa
    14641 ttaaaccgtg gttcttaatc atacccgtta agattgtaaa tgcactccac caaactaatg
    14701 caattgtaat catcttacgt ggaccgaatt tttcagccaa catccccgat ggtacttgca
    14761 ttaatgcata acctagagag aagaatgatg ccaataaacc aaattgtggc tttgtcatcc
    14821 ctaaatcatc catcatttgc ttagcgatat atgaaatgtt tgctctatcc atatacgcaa
    14881 taaccccaat aaagaagaac gcaagcgcga acatccacct tacgttagtt cgtttttcct
    14941 tcataactat tcctacttcc ctaattaatt ttttaaaact taccctgaaa cgttaaaatt
    15001 ttcggacatc tggcatgtcc acccctactt tgtcacaaaa ttgtaccaaa gttatttttt
    15061 ataatattat cagacatgga aagcgtttac aatagaatct ataaaaattt tattaaattc
    15121 cgcttaactt ttgctattaa aacgatataa aggaactttt agttacatag tagcctatca
    15181 tttgttaatt aaaaatactg caatgctagt gttttaaaac gtatattgca ggctttctta
    15241 catatttgac attcatttta aattgcataa aactacattg ctcattcatt gtgcagcgcc
    15301 tgttatttag atgatcattt gttgactttt cgtacttata gcaagcaatt ttttgattta
    15361 ttgcttataa tacattttaa gacaaatgct tgtttcaaca tcgcatacga catcattcat
    15421 tattcatttg aatttatcca gtttctattt gtctgcaatt gctgaaaatt aaaggagctt
    15481 atttttaata atggaacaaa ttatcactga atttattagt cgttttgggt atgcagccat
    15541 ttttatatta attttattag aaaatgtttt acctatcgta ccatcggaaa ttattctgac
    15601 atttgctggc cttatgtctg ttaaatcaca tttatcaatt ttaaccttat ttattattgc
    15661 aaccatcgca tcgtttatag ggctgttaat tttatattat atctgtcgtt tgatttcaga
    15721 agaacgtcta tatcgtttta ttgatcgaca cggtaagtgg attaaattga aaagtaagga
    15781 tttaaagaga gcaaatgatt ggtttaaaaa gtatggcgta tgggctgtat ttatctgtcg
    15841 tttcatacct gtattacgtg tattgattac cattccagcc ggtgtaaacc gcatgaatgt
    15901 tgtgacattt accgttattt cattaatagg tacaacaatt tggaatttcg gtttaatttt
    15961 actaggacgc actttgagcg atagctttgg tatgttgatg actggtcttc atacatattc
    16021 acgtattatg tatgttatca tcattatcgc agtcatttac tttgctatac gttacatcgg
    16081 caaacgtaaa agagtaaaat aatattgttg ttagtataaa ggcatgaatt ttaaatttct
    16141 atacacaaaa agcagtaaaa tcattccatc tattgaaatg attcactgct tttttaagtt
    16201 tatttggcaa actttagctg aaagtcacct atctttatat aaagaaatat tattattaac
    16261 atgatagtta cagttgtgaa ataaaatggt accaatgagt gagaaatgat accaattaat
    16321 aatgcgccga cagtcattcc aatatatctc acaaagttaa atacacctaa cacttttcct
    16381 tttatatgtt caaacctttt agaaattata gtagacagca aagctggcac aataccaaca
    16441 caagtaccta atataaatat aattactgat aatataatta catttgattc gtttaaccat
    16501 ccaaacaata atgtaaatat agcaaatcca gttatagtaa cacgaagtat cattatttca
    16561 ttatattttt ttgacaatcg tttataaaat aaacttccta atataacact aacagtaata
    16621 ggtaaaaaca aaactcctga tattccaacg cctatatcat aggtattatt taataatgtc
    16681 ggtaaataaa ctaatattga aaagtacgtc aaaaatatta aaaatcccaa tgtcactaaa
    16741 gtaataaaca ctttatcgat caaatatttt tcttcaattt tttcagttaa ttttacaatc
    16801 cctttttcaa catttggaat atcaataaaa aagataatca gaaataatac gatagatata
    16861 acaagcaaaa aactaaaaat accaatataa tcccatcttg cacctaaagt actccctagg
    16921 attggtgcca aagctggcgc acatgataaa aatatttgat agttcgccat agcttgagct
    16981 ctaccattat ctgtacttag tttggctaat aaagttaaag tcacgagagg aataattccg
    17041 caaccaattg cttgaaataa ccttgatata gcaaataata taaagttatg tgtcattgca
    17101 caaataaagc tagatatgat tactattccc aatcccgtta aaagtacttt tttcgaatca
    17161 cgagaatcta tacttctacc aagtacaatt tgcataactg caacgataaa tataaaaccg
    17221 ccaactgtcg catttatcca aaatagtggt acttgaaaat cgtcatatag tctcggaata
    17281 ataggcgtgt atatgttttg aatcaatgat gcgaaaaatg ctaaaaatcc tagaatatat
    17341 aatctgatat tactattagt catttaaacc atcttcttct ttttttaatt cttctatact
    17401 acggtttaaa aactctacaa taactgccat ttcatcatta tcaaagactt taagtacttc
    17461 ttcatatttt tttaccgctt tttcatgtaa ttcatcatgt atataagata atttttttcc
    17521 ttcttgtgtt aatgaataat taacttctct tttgttaaat tcattgtgcg attcaactac
    17581 taagcctttc gctaaaagtt tttttatcga tttagtaatt gctggttttg atacatttaa
    17641 catttcagac aaaaatttat tattcacttt atcattagtt aaccggttaa ctatattatt
    17701 gttgtcactc ccatttttgt caaatattgt tgtaattaac atatatttac ttagttatgc
    17761 accatttatt ccgcaaaccc acctcacaaa tccatctata atacaaacta tcattttaaa
    17821 taagcagaat tttccctgtc ttccacacaa actgttttcg tcactgtaat atgccttcta
    17881 ttcaaaaaag tcactcataa caaattgcgc attttaataa
//
LOCUS       DAKPJH010000052        17054 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.052, whole genome shotgun sequence.
ACCESSION   DAKPJH010000052 DAKPJH010000000
VERSION     DAKPJH010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17054
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.052"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(255..704)
                     /gene="ndk"
                     /locus_tag="OY092_001480"
     CDS             complement(255..704)
                     /gene="ndk"
                     /locus_tag="OY092_001480"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HCX1076425.1"
                     /translation="MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMEL
                     AETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIR
                     GDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE"
     gene            complement(796..1755)
                     /locus_tag="OY092_001481"
     CDS             complement(796..1755)
                     /locus_tag="OY092_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HCX1076426.1"
                     /translation="MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVR
                     PAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWD
                     QTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIIN
                     YLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTE
                     KKLGKPVGSDLLNGHITLPILLEMRKNPEFKVKIEQLRRDSERKEFEECIQIIRKSDS
                     IDEAKAVSSKYLSKALDLISELPDGHPKSLLLSLTKKMGSRNT"
     gene            complement(1757..2482)
                     /locus_tag="OY092_001482"
     CDS             complement(1757..2482)
                     /locus_tag="OY092_001482"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000774689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HCX1076427.1"
                     /translation="MADNKANKEQVHRVFQNISKKYDKLNNIISFEQHKVWRKRVMKD
                     MGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKL
                     VHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLP
                     VFKQMYALYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRMFEEAGFINVRV
                     RSFTGGVAAMHLGYKEKDNTKGD"
     gene            complement(2485..3057)
                     /locus_tag="OY092_001483"
     CDS             complement(2485..3057)
                     /locus_tag="OY092_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HCX1076428.1"
                     /translation="METTVSKLERQIEERLKGVSEYESININHRLGKLLDSYDIPDVA
                     KVACLTIDTSMRHLDDITYNHLSKHSILIGDLISAHFYTLLAEINDLSFQNEISKAIV
                     EINELKSSLHHQALNDYEISQAIVKIETLFPYITLSHFGINIDESEIYNYLFEDMSDY
                     YPSYFKKYNQSEVKHYLHDIQKSYLKSRGN"
     gene            complement(3488..3760)
                     /locus_tag="OY092_001484"
     CDS             complement(3488..3760)
                     /locus_tag="OY092_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HCX1076429.1"
                     /translation="MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQL
                     IGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK"
     gene            complement(3931..4929)
                     /locus_tag="OY092_001485"
     CDS             complement(3931..4929)
                     /locus_tag="OY092_001485"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HCX1076430.1"
                     /translation="MTKITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCH
                     TNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVATQINDKLTSKKTFI
                     HVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKS
                     VSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTR
                     GLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSE
                     MNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE"
     gene            complement(4946..6256)
                     /gene="der"
                     /locus_tag="OY092_001486"
     CDS             complement(4946..6256)
                     /gene="der"
                     /locus_tag="OY092_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HCX1076431.1"
                     /translation="MTKPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYS
                     SGEWLTHDFNIIDTGGIEIGDAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEM
                     VAQILYKSKKPVVLAVNKVDNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVV
                     SHFGEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEY
                     SYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDK
                     RVAGYAHEQGKAVVIVVNKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERT
                     RLRTLFPYINEASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEP
                     PTFVVFVNDVELMHFSYKRYLENQIRAAFGFEGTPIHIIARKRN"
     gene            complement(6478..7653)
                     /gene="rpsA"
                     /locus_tag="OY092_001487"
     CDS             complement(6478..7653)
                     /gene="rpsA"
                     /locus_tag="OY092_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HCX1076432.1"
                     /translation="MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGII
                     PISQLSTHHIDSPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQ
                     EKLDNNEIIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIHIKVEE
                     LDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDG
                     LVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQF
                     HENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKIL
                     GIDEENERVSLSIKATLPNEDVVESDPSTTKAYLENEEEDNPTIGDMIGDKLKNLKL"
     gene            complement(7911..8102)
                     /locus_tag="OY092_001488"
     CDS             complement(7911..8102)
                     /locus_tag="OY092_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076433.1"
                     /translation="MSVTNLNIAKEADLVTKNVLCNNSRKMHYIQSSYYSNVKVAYLR
                     GFLFYKSIKFYYNISCREQ"
     gene            complement(8219..8335)
                     /locus_tag="OY092_001489"
     CDS             complement(8219..8335)
                     /locus_tag="OY092_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076434.1"
                     /translation="MQRLTHIQNECAENDLLKLKGDFYSMMNESCLFIFGKS"
     gene            complement(8366..9025)
                     /locus_tag="OY092_001490"
     CDS             complement(8366..9025)
                     /locus_tag="OY092_001490"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HCX1076435.1"
                     /translation="MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYK
                     YLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKE
                     PVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLR
                     GIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSKI
                     K"
     gene            9102..10070
                     /locus_tag="OY092_001491"
     CDS             9102..10070
                     /locus_tag="OY092_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HCX1076436.1"
                     /translation="MKHLLVIHTGGTISMSQDQSNKVVTNDINPISMHQDVINQYAQI
                     DELNPFNVPSPHMTIQHVKQLKDIILEAVSNKYYDGFVITHGTDTLEETAFLLDLILG
                     IEQPVVITGAMRSSNEIGSDGLYNYISAIRVASDEKARHKGVMVVFNDEIHTARNVTK
                     THTSNTNTFQSPNHGPLGVLTKDRVQFHHMPYRQQALENVNEKLNVPLVKAYMGMPGD
                     IFSFYSREGIDGMVIEALGQGNIPPSALEGIQQLVSLNIPIVLVSRSFNGIVSPTYAY
                     DGGGYQLAQQGFIFSNGLNGPKARLKLLVALSNNLDKAEIKSYFEL"
     gene            complement(10203..11171)
                     /locus_tag="OY092_001492"
     CDS             complement(10203..11171)
                     /locus_tag="OY092_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HCX1076437.1"
                     /translation="MQKVESIIIGGGPCGLSAAIEQKRKGIDTLIIEKGNVVESIYNY
                     PTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKK
                     MNNKFTITTTKDVYECRFLTIATGYYGQHNTLEVEGADLPKVFHYFKEAHPYFDQDVV
                     IIGGKNSAIDAALELEKAGANVTVLYRGGDYSPSIKPWILPNFTALVNHEKIDMEFNA
                     NVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYN
                     KETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQSMLAKK"
     gene            complement(11332..11448)
                     /locus_tag="OY092_001493"
     CDS             complement(11332..11448)
                     /locus_tag="OY092_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076438.1"
                     /translation="MLFNKVLSRILTYKLNFSNSHQKDKTLQSTNLTRKNKK"
     gene            complement(11574..13025)
                     /gene="ebpS"
                     /locus_tag="OY092_001494"
     CDS             complement(11574..13025)
                     /gene="ebpS"
                     /locus_tag="OY092_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elastin-binding protein EbpS"
                     /protein_id="HCX1076439.1"
                     /translation="MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENT
                     EQQFPPRNAQRRKRRRDLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQ
                     EPSHQDSTPQHEEEYYNKNAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEV
                     EQSQQPKPYFTTGANQSETSKNEHDNDSVKQDQDEPKEHHNSKKAAAIGAGTAGVAGA
                     MAASKAKKHSNDAQNKSNSGKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGA
                     ASKSASAASKPHASNNASQNHDEHDHHDRDKERKKGGMAKVLLPLIAAVLIIGALAIF
                     GGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKDDQDKAT
                     KDETDNDQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQ
                     YYGSGSPENVEKIRRANGLSGNNIRNGQQIVIP"
     gene            complement(13178..14557)
                     /locus_tag="OY092_001495"
     CDS             complement(13178..14557)
                     /locus_tag="OY092_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HCX1076440.1"
                     /translation="MLHDILRNKFGFENFKPGQQEIIESIMSQQHTLGILPTGSGKSL
                     CYQIPTYLSGKPTLIISPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKCLR
                     HSRFIFLSPEFLLQPSNFKLISMIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTKHF
                     KEAVVLALTATAPPHLQDDLTEMLAIQFKVIKTTMNRPNISFKHLNFHDDEDKIEWLL
                     PFLQQSGPTIIYVSSKKMCLNLAHLIYDSGFLTGIYHGDMNYQERHTVQQQFLNNDIP
                     IIVATSAFGMGINKKDIRTIIHFHLSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKY
                     ILETLLFADMITEEDVQNFEIGEFLAPDKQDVLTTLHSFYSIGALKQIFKQSFKRKQL
                     GFFRMIGYCKLDQCRRKYLLEFFGEYPPAQDRCCDNDSNITDIVILNKKKVIRSIGFD
                     EKLQNLFLR"
     gene            complement(14547..15500)
                     /locus_tag="OY092_001496"
     CDS             complement(14547..15500)
                     /locus_tag="OY092_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076441.1"
                     /translation="MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLS
                     LYHSLPLLKYPSFELFLENITEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTM
                     QQDFRFVPISQNNKIQETVKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYL
                     QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLN
                     QTYITYTRLLEQFTMEDIAAQQQVKINTIEDHVLEILIKGYMSNYDDYVEQEDQLQFL
                     NFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA"
     gene            15608..15856
                     /locus_tag="OY092_001497"
     CDS             15608..15856
                     /locus_tag="OY092_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HCX1076442.1"
                     /translation="MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGT
                     AEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE"
     gene            complement(15962..16507)
                     /locus_tag="OY092_001498"
     CDS             complement(15962..16507)
                     /locus_tag="OY092_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HCX1076443.1"
                     /translation="MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSL
                     LATFTFGPVAGIVVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTK
                     SLITGLIIATIVMTIVLSILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKG
                     IVISIVFILLYRRLANFLKRI"
     regulatory      complement(16569..16703)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(16909..>17054)
                     /locus_tag="OY092_001499"
     CDS             complement(16909..>17054)
                     /locus_tag="OY092_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1672 family protein"
                     /protein_id="HCX1076444.1"
                     /translation="KKKNIPRDLNVSLQISNKYINTKRPNYSKKDVIEIGVFNHEKAN
                     TND"
BASE COUNT         5197 a         3064 c         2460 g         6333 t
ORIGIN      
        1 taagaacatt aaaatcccta aaataattga aataatattc ttcattctat caaccccttc
       61 ttttagttta gtttcatttg ataaagaata ttcctctctt tttaatacgt gttaccaaaa
      121 aaactataaa atttttcaag taatttacta caacataaaa aacgggcctt gttatgtata
      181 atcataatga ctaaccacat aacaaaaccc tttctacctt tataaataaa tcgtaaaggt
      241 ttacagttta aattttattc atataaccat gcatcacgtg gtgaagcata gctagtaatt
      301 tcattttcat taaaccatag attaatttca cgttcagcag actctaatga atctgaaccg
      361 tgaatgatat ttctaccaac agttaaacct aaatcacctc taattgatcc tggtgaagct
      421 tctgaaggat ttgtgctgcc aataatatgt ctagatacat taactgcatc ttcaccttca
      481 actaccattg cgaacactgg tgctgatgta ataaatgaaa ttaaatcatt ataaaatggt
      541 ttaccttggt gttcaccata atgtgtttca gcaagttcca ttggtacttg cattaattta
      601 ccaccgacaa gttttagtcc ttttctttca attcttgaaa ttacttcacc aattagattt
      661 ctttgtactg catctggttt aatcattaaa aatgtacgtt ccactttatg tatccccctg
      721 tgtttaatag gtttatgtat attactatta tatattaaca ggttggtaaa gcgctttcaa
      781 tacttttcat aaatactacg tgtttcttga acccattttt ttcgtcaaac ttaaaagtag
      841 tgatttcgga tgtccatctg gtaactcaga aatcaaatcc aaagctttac ttaaatactt
      901 cgaacttact gccttagcct catcgatgct gtcagatttt ctaatgattt ggatacattc
      961 ttcaaattct ttacgttcac tatcacgtcg taattgctca attttcactt tgaattctgg
     1021 attttttctc atttccaata aaataggcaa agtaatatga ccattcaaca aatcacttcc
     1081 gaccggctta cctaatttct tttcggtact tgtgaagtct aatacatcat caatgatttg
     1141 gaagctcata cctatataat gaccaatcat tttcaatttt cgtacagtct ctttatcaga
     1201 ttgagatgta attgcaccaa cttcagttga taattgaatt aacagtgctg ttttgcgatt
     1261 gatacgtcgt aagtaattga taattgtctg ttgactgtta aattggtctt gaaattggaa
     1321 aagttcccct ctacaaacat caactataga ttcagatatt aattgatgta cacgattatc
     1381 tttaacggcc attaagtgtt caagtcctaa tgccaataaa aaattcccag ttaaaatagc
     1441 agttgtctga tcccatttct ttgatatggt taacttgcct cgacgcttgt cgcttttatc
     1501 aataacgtca tcatgaacaa gtgttgccat atgaattaac tctaatgcga ctgcaacttg
     1561 atacgtttgt tcagacgttt gttcatcttt gccaaattgg ctactcagaa ttacaaatgc
     1621 tgggcgtact cttttaccac cagaagataa taagtgtaat gatgcctgtt ctaatacaga
     1681 atctttactt tttattgcct tttcaagtcg ttgttccact ttcttaattt cattgttcat
     1741 gtttaacttt gccacgttaa tcacctttgg tattatcttt ttctttatag ccaaggtgca
     1801 ttgcagcaac gccccctgta aaactacgta ctcttacatt tatgaaaccc gcttcttcaa
     1861 acatgcgctt caactcttct tttccaggaa aattaaacgt agattgctgt aaccattcat
     1921 attcttcttt tgattttgca aataatttcc caaaaatagg cataacaaat ttaaagtata
     1981 atgcatacat ttgtttaaag actggcaaag ttggttggct cgtttcaaga cataccacca
     2041 taccacctgg tttaagtact ctattcattt cttttaacgc gactaaatag tctggcacat
     2101 tccttaatcc aaacccaatt gttacataat caaaagaatt gtcttcaaac ggcaattcca
     2161 ttgcatcacc atgaacaagt ttaacatttt ccattgaagc agttttttct tttcctactt
     2221 ctaacatatt ctcactaaag tcaataccag taacttcacc tgttggtcct acagctttgc
     2281 ttaatgcgat tgtccaatca ccagtaccac aacaaacatc taatgctttc gtcccttttc
     2341 taacacccat gtctttcatg acgcgttttc tccatacttt atgctgctca aaactaataa
     2401 tattatttaa tttgtcatat ttttttgaaa tattttgaaa aacgcgatgt acttgctctt
     2461 tatttgcttt attgtcagcc atgcttaatt acctctactt tttaaataac ttttttggat
     2521 atcgtgtaag taatgcttta cttcactttg attatatttc ttgaagtatg atggatagta
     2581 atcagacata tcttcaaata aataattata tatttccgac tcatcaatat tgataccgaa
     2641 atgagataac gtaatatatg ggaaaagtgt ttcaattttt actattgctt gagaaatttc
     2701 ataatcattt aaagcttgat gatgtaatga agatttcaat tcattaattt caacaattgc
     2761 tttactaatt tcattttgaa atgataaatc attgatttct gctagtagcg tataaaaatg
     2821 cgcactaatt aaatctccaa tcaaaatgga atgtttagac aaatgattat atgtaatgtc
     2881 atcaaggtgt ctcattgatg tgtcaattgt gaggcatgct actttggcaa catctggaat
     2941 atcatatgaa tcaagtaact tacctaaccg atgattaata ttaatggatt catattctga
     3001 tacacccttt aatctttctt ctatttgtct ttccaatttg ctaacagttg tttccatgtc
     3061 tacacctcac gatattatca ctattcatat taacattata tgtaagaaat taaaatcttt
     3121 tgaagcatta agattactta tcatttttaa atttcaattt aaactaacag taatttatgt
     3181 agcttttgta attctcataa taacctttac ttcatttaca ttattcatct ttttaaataa
     3241 cgtaaaatac tatagtagac atggttacct tttaagtaaa ttcaacgcta acaattaatc
     3301 tcattattca tatgtatatt ttgtagttgc tatttttatc aaaactatta tgtcatgtaa
     3361 tattttgaac gcttaaacaa tgaatgttcc aaagattaaa aacttagaag aacattacaa
     3421 attatgtaca ggttgtaagt attaaaagca aaataaaaag cccttattca gggcttttta
     3481 agtaaaatta ttttacagca tcttttaatg ctttaccagc tttgaatgct ggaactttac
     3541 ttgctgggat atcaatttct ttaccagttt gagggttacg acctttacgt gcagcacgtt
     3601 cacgtacctc aaagttaccg aaaccaatta attgtacttt ttcaccttta gcaagtgagt
     3661 tttggattga ttcgaataca gcatctactg ctgaaccagc ttctttttta gttaaatcag
     3721 cttgctctgc aactgcattg attaaatctg ttttgttcat tagacattca cctcctgagg
     3781 tttgataatg atatgtttat atcattatgg taaaacttta acacaagcat tacataaatc
     3841 gcaatcattt atgtggcaaa aacgttgaat ttaagccatt tctattcatt ttacgtaatt
     3901 attagccgta tatgtgtaat aatacacatt ttattcagat tttttatcgc gctccattaa
     3961 atcttttacg cattctttta ctgagatatt ttcaaataat actctatata atgcatttgt
     4021 aattggcata tccacatttt tttctttagc taaatgataa actgatttag ttgtataaat
     4081 accttcaaca accatattca tttcagataa tgcttgatcc attgattcac cttgtccaag
     4141 tttatatcct aatgtgaaat ttcgagaatg tgttgatgtg caagtaacga ttaagtcacc
     4201 gataccacct aaacctagaa atgtcatagg atcggcacct aacttttcac ctaatctact
     4261 aatttccgct aaaccacgag tcattaacgc agcttttgca ttatcaccgt agccaattcc
     4321 agctacgata ccacttgcta ctgcgatgat atttttcaat gcaccaccaa gttcaacacc
     4381 aatcaagtca tcattcgtgt acacacgcaa ataatcattc ataaataaat cttgcgttaa
     4441 tttacttaca cttttatctt ttgatgatgc agcaactgta gttggttgct tgactacaac
     4501 ttcttccgca tgacttggcc ctgacaacac gccaatacct gcattatatt cgggtgaaat
     4561 agaatcttca atcatttctg acacacgttt aaacgtccca ttttcaatac ctttagcaac
     4621 atgtataaaa gtctttttag aggtcagctt atcattaatt tgagtagcaa cttctcgcat
     4681 tgctttagta ggtaaagcca ttaagtaaat atctgcaaat tgaattgctt tggtcatatc
     4741 tgaagtagcg atgatgttaa catctaattt cgcgtatttt aaatactttt tatttgtatg
     4801 acatgtattt aattcatcaa cagcatcttg atttttaccc cacatcaaaa catcatgtcc
     4861 attttctgca agaacattgg caagggctgt cccaaaactt cccataccaa aaacggtaat
     4921 tttagtcatt gttatccccc aatcgttaat ttctctttcg agctataata tgaattggtg
     4981 taccttcaaa accaaaagcg gcacggattt gattctctaa atagcgttta taagaaaaat
     5041 gcattaattc tacatcatta acaaatacaa caaatgtcgg tggttctata gcaacttgtg
     5101 ttgcataaaa gacattcaaa cgtctacctt tgtctgttgg tgtagggttc atggaaattg
     5161 catcagtaac gacttcattt aaagttgaac tttgaacacg ttttttatgg ttttcacttg
     5221 cttcattaat gtaagggaat aatgtacgta atcttgtgcg ttctttagca gacacaaaag
     5281 caatttgtgc ataatctaaa aattggaatt ctttacgtac ttcatcttca aatttcttca
     5341 tcgttttact atctttttcc acagtatccc atttatttac gacaatcacg actgctttac
     5401 cttgttcatg tgcatatcct gcaacgcgtt tatcttgttc aatgatgcct tgttctgcat
     5461 caatgaccac taaaacaaca tttgaacgtt caatcgcttt taaagctctt agtactgaat
     5521 atttctcagt tgattcatat acttttcctt ttttacgcat accagcagta tcgattaaaa
     5581 cataatcttg tccatcataa ctatactctg tatcaatagc gtctctcgtt gtccctgcaa
     5641 cattagaaac gataacgcga tcttcaccta aaatagcatt tactaaactt gatttaccta
     5701 cgtttggtcg tccaataatg gatagtcgaa ttgtatcttc atcataagga tcttcttcct
     5761 cttcaccaaa atgagaaaca actgcatcta acaagtcacc aagacctaaa ccatgtgacc
     5821 ctgatatcgg atacggttca ccaaatccta atgaatagaa atcatacacg tctgtacgca
     5881 tttccatatt atctactttg ttaaccgcta atacgaccgg ttttttagat ttgtataaaa
     5941 tttgagcgac catttcatcg ctttgtgtca atccttcacg cacgttaacc ataaaaataa
     6001 taacatccgc ttcatctatg gcgatttctg cctgcgctct aatttgtgtt tggaatggtg
     6061 catcaccaat ttcaatacca cctgtatcaa taatattgaa atcatgtgtt aaccattcac
     6121 ctgaagaata aatacgatct cgtgttacac ctggcgtgtc ttccacaatc gaaacacgtt
     6181 ctccaactat tctattaaaa attgtagatt tacctacatt aggcctacct acaatagcta
     6241 ctataggttt agtcataagc taacttcctc tctttcttat atctttttaa taatatcaca
     6301 tgagactgtg tattcaaaat gagtttatta ctgtaatgat aaaaatcagc acttaaaact
     6361 ttatctcttt aaacacttag ttaaatttgt ccacgttatc attccgagta tattttggta
     6421 caaaaaaata ctccacatgc aatcataaac atgtggagtt gactattaaa tattaaatta
     6481 tagtttaaga tttttaagtt tatcaccaat catatcgcca attgttggat tatcttcttc
     6541 ttcgttttct aagtacgcct tagtcgtaga aggatcactt tcaacaacat cttcgtttgg
     6601 taatgttgct ttaatagata gtgatactct ttcattctct tcatcaatac ctaatatttt
     6661 aacatttact tgttgaccag gttctaacac ttcacctggc gtaccaatgt gtttgtgtgc
     6721 aatttcagaa atatgtacaa gtccttgtac acctggtgca atttctacaa atgcaccaaa
     6781 gtttgccaat cttactacga caccttcaat gacatcattt tcgtggaatt gacctttaat
     6841 attttcgaaa ggtgttggta acgtatcttt gattgataat gaaatacgtt ctgtatctct
     6901 atcaatagat ttaattttaa ctttaacatc ttgaccaatt gaaactactt cttctggtgt
     6961 ttgaacatgt tcgtgagaaa gttcagatac atgcactaaa ccatcaacac cgccaatgtc
     7021 tataaatgca ccaaattgag ttaaacgtgc tactttacca tcaataacat cgccttcatt
     7081 taaagattgt aataattgat cttttttagc atcattttct tcttgttcaa ctgctttacg
     7141 gcttaaaatg actctattat tttcaggatc caattcttca actttaatat gaattgtttg
     7201 tccatcaaat acagagaaat cctcaatgaa gtctgttgaa attagtgaag ctggaacaaa
     7261 acctctttgt cctacatcaa caaccaaacc acctttaact acttctgtta ctttcgcttc
     7321 gatgatttca ttattatcta atttttcttg taaataacta taagacttct cagtttcaag
     7381 ttgtcttcta gataagatgt aagctccagt ttcattttct tcatcaaact caactttagt
     7441 gacatatgct tcaacttcgt cgccctcttt tacaacttca cttgggctat caatatgatg
     7501 cgtagatagt tgactaatag gaataatccc attaaattta ccaccgttga tatgaacaac
     7561 aacttgcttg tcttcaactt gctgtacctc gccagtgact ttgtcacctt ctttaatatc
     7621 gttaatcatt gattcattga attcttcagt catcttgttt gcctccttat acactacata
     7681 tttataacat cttataaact gacagaattg tcaagaaatt ctacctttat tacatttagt
     7741 aaattagttg tatccataaa tatgtcactt aatctcattc tgtgaattag ttggacatat
     7801 atttattaca accatatatt caaacaagta ataaagtccg ctatgtttat acatattttt
     7861 ttgtataaaa attagcatag cttactattt tgttttataa gtctgtcatt tcattgttct
     7921 ctacaagata tattatagta aaattttata cttttataaa acaaaaagcc acgcaaataa
     7981 gcaactttta catttgaata gtaagaagac tgtatatagt gcatctttct cgaattatta
     8041 cataggacat tttttgtgac taaatcagct tcttttgcaa tatttagatt tgtaacactc
     8101 attttcttac catttgtaaa atgctttatg aatgtaatga attatttttg gaattctaat
     8161 aattcacctt tattatttct ttttactttt tgaaaaactt acacaattca ctgacgcatt
     8221 aacttttacc aaaaataaaa aggcaacttt cattcatcat tgaataaaaa tcacctttta
     8281 atttgagtaa atcattctca gcacattcat tttgtatatg cgttaagcgt tgcacattac
     8341 aaatagatag ttatgactta ttagattatt taattttact caccatcgct aaaatttcgt
     8401 cagtaacttc ttcaatcgac ttgcctgtcg tatctaatgt cactgcatca tctgcttttc
     8461 ttaatggtga tatttcacgg ttcatgtcat attgatcacg agcttcaata tcacgtttta
     8521 aatcttcaaa atttgattcg atacctctta attgattatc tttatatctt ctttctgctc
     8581 gctcttcaac tgatgcaatc atatatactt ttaaatctgc atctggtagc actacagttc
     8641 cgatatcgcg accatccatt acgatacctt tttctgcagc taactctttt tgttttttaa
     8701 cggcgaatga acgtactggc tctttagatg caacgtatga aacatgttgc gtcacatcat
     8761 tatttcttaa aaagtctgtt acatcttcgt tatctaaaat gacacattga cctttatctg
     8821 ctttataagt taaatctaat gttgtttggt caactagttt tgcaaagtcc tcagttttgt
     8881 ttaattttaa atatttgtat gttaatgcac gatacattgc tcctgtatcg acataaatca
     8941 ttgatagttc gctggctaca cgtttcgcaa ttgtactttt tccggcagca gctggaccat
     9001 ctaatgcaat attaatggct ttcatgcgtc atttcccttc cttgtcgttt tatgaataat
     9061 attttatcat aattaggtaa atgaaatata ggaggaaata tatgaaacat ctactggtta
     9121 ttcatactgg tggcaccatt agtatgtcac aagaccaatc taataaagta gtaacaaatg
     9181 atatcaaccc tatttcaatg catcaagatg tcataaatca atatgcacaa atagatgaat
     9241 taaatccttt taatgtacca tcacctcata tgacaatcca acatgttaaa caattaaagg
     9301 atattatttt agaagcagta tcaaataaat attatgatgg tttcgttatc acgcatggta
     9361 ccgatacgtt agaagaaact gcctttttac ttgatttaat attaggtatc gagcaacctg
     9421 ttgttattac tggcgcaatg cgctcgtcta atgaaattgg ttctgacgga ttatataatt
     9481 atatttccgc tattcgcgtt gcctctgatg aaaaggctcg tcataaaggc gtgatggttg
     9541 tatttaatga tgaaattcat acggcgcgta atgttaccaa aacacatacg tctaatacaa
     9601 acacatttca aagtccaaat catggtccgc taggtgtatt gacaaaggat cgtgtgcaat
     9661 tccatcatat gccatatcgc caacaagcat tggaaaatgt caatgagaaa ctaaatgtac
     9721 cattagtaaa agcatatatg ggtatgccag gtgacatttt tagtttttat agtcgtgaag
     9781 gtatcgatgg tatggttatt gaagcgttag gacaaggcaa catacctcca agcgcattag
     9841 aaggcattca acaattagta tctttaaata tacctattgt gctagtttca cgttccttta
     9901 atggtattgt gagtccaact tacgcatacg atggtggtgg ttaccaactc gcacaacaag
     9961 gttttatttt ttctaacggt ttgaatggtc caaaagcaag attaaaatta ttagttgcgt
    10021 taagcaacaa tttagataaa gctgaaatca aatcatattt tgaattataa tgattacgta
    10081 atataaaaag gtctatgtac aataattagt catcaacctc atttgacata tcatgaatgt
    10141 cagtcgttgt aaaactaagt tatctagtac atagaccttt gtttttatga ttctaacggc
    10201 gtttatttct tagctagcat gctttgagca ataatgccac cgtggaattt accattttca
    10261 ataaaaatgg tattcgcatc attccctgca gcaatcacac ctgcaatgta gcaattttcg
    10321 atatttgttt cgtatgtttc tttattatac ataggcgctg ttccaaattc atttgtatta
    10381 atttgaatgc ctacagattt taaaaattca taatcgggat gataaccaat catcgcaaat
    10441 acataatcat tgtgtatcgt tttactttca ccatttactt cataagtcac agtatcttca
    10501 gttatttggg taacattagc attaaattcc atgtcaattt tttcatgatt tactaatgct
    10561 gtgaaatttg gaagtatcca cggtttaatt gaaggtgaat aatctccacc acgatataga
    10621 accgtcacgt tagcaccagc tttttccaac tccaaagcag catcgatagc cgaattctta
    10681 ccaccaataa taacaacatc ttgatcaaaa tacggatgtg cctctttaaa ataatggaac
    10741 actttaggta aatccgcacc ttcaacttct aatgtattat gctgaccata atagcctgtc
    10801 gcgattgtta aaaatcgaca ttcataaaca tctttcgtcg tagtaattgt aaatttatta
    10861 ttcatttttt taacagttaa tacttcttca aatgcattta cttttaattg atgatgtttt
    10921 acaacttctc ggtaataaac tagcgcttga ttacgtcttg gtttactttc ttcaacgata
    10981 aacggtacgt ccccaatact taatttatca cttgatgaga aaaatgtttg gtgagtagga
    11041 taattgtaga ttgattcaac gacattaccc ttttcaataa ttaaggtatc aatacctttt
    11101 cttttttgtt caatagccgc acttaatccg catggccctc caccaattat gatactttca
    11161 actttttgca ttgtttcggc ctcctttaat cccaaactat tataacagtt cagtgattga
    11221 tacgctaagt ctgtgcttga agatttatga tatatttttg acaatttgtt taatgtgcat
    11281 agagaattgt tagctacgga gttgaataac actacaattt aatatgttga tttatttttt
    11341 attcttcctc gttaaatttg ttgattgtag tgttttatct ttttgatgac tatttgaaaa
    11401 gtttaattta tatgtcaata tccgagacaa caccttgtta aataacaaac tttgaaaaag
    11461 gaaaaaaccg ctacatactt ataagcgcaa tttaagttct ctaaaatatt tagagttact
    11521 ttatattatg cacgtttgta tatagcagtt cagttacaat ttatatagtt atattatgga
    11581 ataacgattt gttgaccgtt tctaatattg ttaccactta aaccattggc acgtctaatt
    11641 ttttcaacat tttccggtga acctgaaccg tagtattgaa ttgcgatacg gtataagttt
    11701 tcttgaccat tcactgtatg tctttggcca ccaccttgac gttgttgttg ctgttgttga
    11761 ttttgattag cttgttgttg attttgatta ttttgtgctt ggttgttcgc ttgattagcg
    11821 ttgttttgat cattatcagt ttcatcttta gtcgctttgt cttgatcatc ttttgattta
    11881 tcactgtctg tagattttga tttatcttta gaagcgtctt tagatgtgtc tttgtcttta
    11941 ctttcatcag cattattttt atttgtattc gcgattttat tttcttttgt accattatta
    12001 tgattgttta atgccatgcc tccaaatatc gctaatgcac cgataattag tacagctgca
    12061 attaatggta acaatacttt ggccatgcca ccttttttac gttctttatc tctgtcatga
    12121 tggtcatgtt catcatggtt ttggcttgca ttattagagg catgtggttt tgaagcggca
    12181 gaagcacttt tacttgctgc gcctccagcc aaacctgctg ttccagcacc gatcgctgca
    12241 ccttttttgc cattatgatg atctttagac ttatcttgag acgctttatc ctcagtcgag
    12301 ttattcgcct tgccagaatt acttttgttt tgagcgtcat ttgaatgttt cttagcttta
    12361 gaagcagcca ttgcacctgc tacacctgct gttccagcac caatagctgc tgctttttta
    12421 ctattatgat gttctttagg ttcatcttga tcttgtttta cagaatcatt atcatgttca
    12481 ttttttgatg tttctgattg gttagcacct gttgtaaaat atggtttagg ttgctgagat
    12541 tgttcaactt cactcttatc agaaactgtt gaatgctcag tgttattttc tgcattttta
    12601 atagtatcgt gtttatcatt gtcttcgatt ggttctggat gtgatttatc cattgcaaaa
    12661 gcattcttat tataatattc ctcttcatgt tgaggtgtac tgtcttgatg gctaggttct
    12721 tgactttcag tactgtgtga tgattcaact tgacgatcat ctattgtgcc agcctcattt
    12781 tgaacattgt cttcagatgt ttgtgattca ttgtgaactt gtttattatg attcgttgct
    12841 aaatcacggc gtctttttct tctttgggca tttcttggcg gaaactgttg ctccgtattc
    12901 tctattgtat cctgatgttc taattctgat tggtcttttt caacatcttc cgtatggtct
    12961 tgatgtgaat ttgtgtctat cgattgacga tttttttcaa agtcatcttt aaaattatta
    13021 gacatagcca tcttcctttc tattctatta caatgatttt acataaaata tacccacatg
    13081 acatatgttt atgtatattt ttcaaaatta tttcaatcat ttttcaattg tgtatacact
    13141 aattatagct tgtcaatttt cttttagtaa agtaatacta tctgagaaat aaattttgca
    13201 acttttcatc aaatccaata cttctaatta ccttcttctt atttaaaatt acgatatcag
    13261 ttatattaga atcattgtca caacatcgat cttgtgccgg tggatattca ccgaaaaatt
    13321 ctaataaata ctttcgtcta cattgatcta atttgcaata gccaatcatg cgaaagaatc
    13381 ctaattgctt tcgtttaaat gattgcttaa atatctgttt caaggcgccg atactataga
    13441 atgaatgcaa cgttgtcaaa acgtcttgtt tatcgggtgc taaaaattct cctatttcga
    13501 aattttgtac atcttcttct gttatcatat ctgcaaataa taatgtttct aaaatgtatt
    13561 tatcgtccgg ttgaaataaa ctaattgcct gacttagttc accatcgcga cccgcacggc
    13621 caatttcttg aatgtagtta gaaggacttg ttgaaagatg aaagtgaatg attgtgcgaa
    13681 tatctttttt attaattccc ataccaaaag cactcgttgc gactataatc ggaatatcat
    13741 tatttaaaaa ttgttgttga actgtgtgtc gctcttgata attcatatca ccatgataaa
    13801 tgcctgtaag aaaacctgaa tcataaataa ggtgcgctaa attcagacac atctttttcg
    13861 atgagacata aataatcgtt ggtcccgact gttgtagaaa cggcagcaac cattcaattt
    13921 tatcttcatc atcatgaaaa ttaagatgct taaagcttat gtttgggcga ttcattgtag
    13981 ttttaataac tttgaattga atcgctaaca tttccgtcaa atcatcttgt aaatgcggtg
    14041 gtgcagttgc tgtcaatgct aagacaaccg cttctttaaa atgctttgtt acttttccta
    14101 ttagagcata atgtggtctg aaatcatatc cccattcaga taggcaatgt gcttcatcta
    14161 gaacaatcat gccaaagtct atcatagata ttaatttaaa atttgacggt tgcaggagaa
    14221 attctggact tagaaagatg aagcggctat gtcgtaaaca tttaatatta tgctttttct
    14281 caatttcatc cataccagag tgaatacatg ttacacgttt ttctccattt attttcaact
    14341 gcataacttg gtcatccatt aaagatatta acggtgagat aattaatgtc ggcttacctg
    14401 ataaatacgt aggtatttga taacacaaac tctttccact tccagttgga agaataccta
    14461 gagtgtgttg ttgagacatt atactttcta taatttcctg ttgtcccggt ttaaaattct
    14521 cgaagccaaa tttgtttcgt aaaatatcat gcaacattca gatcacctct ttcaaatcca
    14581 acgattaata cttttaattg aaaatatgat aacgtgtcaa attgttcttt gtaaaatttt
    14641 aatcgttcac cacgatgttg ttgataaaaa tttaaaaatt gcagttgatc ttcttgttca
    14701 acataatcat cgtaattaga catataacct ttgattaaga tttcaagtac atgatcttcg
    14761 atagtattga ttttaacttg ttgttgagcc gctatatctt ccatcgtgaa ttgttcaagc
    14821 aatcttgtat aagtaatata agtttggttt aataatgtag gtttcattat tatttttgat
    14881 aaaatagtat attctccact ttctaattca aacatcattg tcactaaatt attcatttcg
    14941 tattcaaaca attgctgttg agatagcttt tctattaaac taacttgctg tctcgtatac
    15001 attggttcat catagccttg caaataataa tgtaagtaac atggcccttt taaagttatt
    15061 gctttaaaca agttatgtag ttcattttca aaatcaattt gtaattggtt ttctttaata
    15121 tagttataga caatctttac agtttcttgt atcttattat tttgagagat tggtacgaaa
    15181 cgaaaatctt gctgcatagt attagacatg gtttgcacta atagttgaat tgcttgaaat
    15241 gtttgcccca tactttcaaa tgtatatcta ggatgcaaca tgatttccat ttcagcatta
    15301 aattcagtta tattttctaa aaatagctca aaagacggat attttaatag tggtaaactg
    15361 tgatataatg acaactgttg ttgactacaa gcgtcaaaaa aggtttggtg agatttctta
    15421 ccaactaaga tattgtaaat acttttattt gttttatagt taaatgtttg ttgtaatgct
    15481 gtttttataa tgtgttgcaa gtttaaccct cactctgtaa aacggataat ttgaaaataa
    15541 aaatgatgct gtctaaaatt ttagtcacat tactatttta gcatttttat caaaggaggc
    15601 gaagacattg gcaaaatata caatcgttga tatggatact tgtattgcat gtggtgcatg
    15661 cggtgcagca gcgccagata tatatgatta cgacgacgaa ggtattgctt tcgtaatcct
    15721 tgacgataac caaggtactg cagaagtgcc tgaggaatta tatgaagata tggaagatgc
    15781 aattgatgga tgccctacag attctattaa aattgcagac gaatcatttg atggggacgc
    15841 tttaaaattt gaataattga ttttttagac aaatgttcca tagaaaaagc aggcaagcta
    15901 tcgtttattg atagtcacct gctttttatt attatgtgta tattattttg ctttaatttg
    15961 attaaattct tttcaagaaa ttcgcaagcc ttctatatag taaaataaat acaatagaaa
    16021 taacgatacc tttaataata ttgaatggta taattcctga aacaatgatt actttaagat
    16081 tatttgcgat atcagctaag ttaaatatca taccgtacaa aggtaataga acgaaatagt
    16141 tcaaaatact caacacgata gtcataacga ttgttgcaat gattaatcca gtaatcaaag
    16201 attttgttga acgtttattt ttatagatgg cgtaagcagt taataagaaa cttgcgcctg
    16261 ctaaaaagtt agcaaatggt ccaactggat cgcccatact aaataagtag ttcaataaat
    16321 ttttaaccag tgcaactacg ataccggcaa ctggtccaaa cgtaaatgta gctagtagtg
    16381 acggtacatc actaaaatct aaagttaagt atggtggcaa aaatggtata ggaaacttga
    16441 taaaagttaa cacaaacgca atcgcgctca acatacttat tgtgataaga cgtttatttt
    16501 gttgcatatt caattttctc cttccattca tctcgtaaga ataggaggat tattgcacaa
    16561 caaaaaacct ccatcttctc ccatccagac tatactgtcg gctctagaat ctcactagat
    16621 cagccactaa tatgatacat actagcaggt cgcaggcttt ttttactgcc ggttgggaat
    16681 tacacccgac cccgaagatg aattttacat tattaaattt aattctcatt aattttatac
    16741 tatatatcac aaaacctcaa taactatgct taaataagat catagttacg ttatcggaga
    16801 gtgatgcatt ggtgatttga gttcattggt tgggtaggtt tgattggttt gtggttttgt
    16861 ctgttgttag gatggctttt ttgaacctat ctttttattg tttttagttt aatcattcgt
    16921 gttagctttt tcatgattaa atacacctat ttctattaca tccttcttac tataattagg
    16981 tctttttgta tttatatatt tattagaaat ttgaagagaa acattcaaat cacgaggaat
    17041 attctttttc tttt
//
LOCUS       DAKPJH010000053        17016 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.053, whole genome shotgun sequence.
ACCESSION   DAKPJH010000053 DAKPJH010000000
VERSION     DAKPJH010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17016
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.053"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            149..2680
                     /gene="secA"
                     /locus_tag="OY092_001500"
     CDS             149..2680
                     /gene="secA"
                     /locus_tag="OY092_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HCX1076445.1"
                     /translation="MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKT
                     KQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGD
                     IAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGL
                     NLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSI
                     LIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAE
                     RMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRR
                     FSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYN
                     MTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEY
                     ISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEEL
                     GGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSR
                     LGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSII
                     DEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKG
                     KDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQG
                     IHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFG
                     EAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK"
     gene            2722..2820
                     /locus_tag="OY092_001501"
     CDS             2722..2820
                     /locus_tag="OY092_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076446.1"
                     /translation="MLWEESFYFTSVKYFKKCEEVVKRCYVLSFKK"
     gene            2995..4105
                     /gene="prfB"
                     /locus_tag="OY092_001502"
     CDS             join(2995..3066,3068..4105)
                     /gene="prfB"
                     /locus_tag="OY092_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667688.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HCX1076447.1"
                     /translation="MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPN
                     FWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEV
                     IYFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGF
                     KVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS
                     CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQN
                     ERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMV
                     KDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD"
     gene            4258..4365
                     /locus_tag="OY092_001503"
     CDS             4258..4365
                     /locus_tag="OY092_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076448.1"
                     /translation="MCLLKQHMQCAFSNITYGDFRGIELIVENVLNYMV"
     gene            4513..5352
                     /locus_tag="OY092_001504"
     CDS             4513..5352
                     /locus_tag="OY092_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1076449.1"
                     /translation="MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQ
                     AQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQ
                     TKAVKSPVRKASQAKKVVQQPVQQASKKVVVKQAPKQAVAKTVNVAYKPAQVQKSVPT
                     VPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFK
                     VDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYN
                     YIH"
     gene            5526..6176
                     /locus_tag="OY092_001505"
     CDS             5526..6176
                     /locus_tag="OY092_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HCX1076450.1"
                     /translation="MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYL
                     ATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVET
                     FIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFE
                     IYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE"
     gene            6173..6409
                     /locus_tag="OY092_001506"
     CDS             6173..6409
                     /locus_tag="OY092_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HCX1076451.1"
                     /translation="MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEY
                     FHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR"
     gene            6678..8663
                     /gene="uvrB"
                     /locus_tag="OY092_001507"
     CDS             6678..8663
                     /gene="uvrB"
                     /locus_tag="OY092_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002473941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HCX1076452.1"
                     /translation="MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATG
                     TGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEA
                     YVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLV
                     VSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEF
                     FGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKEL
                     RNENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDD
                     WLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLV
                     YVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERV
                     LVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLR
                     EGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAI
                     DETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKER
                     QKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG"
     gene            8671..11517
                     /gene="uvrA"
                     /locus_tag="OY092_001508"
     CDS             8671..11517
                     /gene="uvrA"
                     /locus_tag="OY092_001508"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HCX1076453.1"
                     /translation="MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVAT
                     VTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHR
                     KGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETR
                     LADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGAC
                     PTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDK
                     PFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEY
                     TREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSE
                     QDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGV
                     LYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGE
                     HGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIDVPEYRRPASDRKISIRGARSNNLKG
                     VDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDK
                     IIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFF
                     ENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDE
                     PTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIV
                     ATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK"
     gene            12009..12941
                     /locus_tag="OY092_001509"
     CDS             12009..12941
                     /locus_tag="OY092_001509"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HCX1076454.1"
                     /translation="MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSH
                     YASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKE
                     LNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSET
                     ALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSI
                     LTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVA
                     AMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE"
     gene            12947..13786
                     /locus_tag="OY092_001510"
     CDS             12947..13786
                     /locus_tag="OY092_001510"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HCX1076455.1"
                     /translation="MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVK
                     AGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPGEIIKIWHGGIAIHGGLIG
                     GFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLH
                     LPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGR
                     FFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTK
                     KVK"
     gene            13794..14279
                     /locus_tag="OY092_001511"
     CDS             13794..14279
                     /locus_tag="OY092_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCX1076456.1"
                     /translation="MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMV
                     LKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEF
                     RYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIR
                     R"
     gene            14287..15726
                     /locus_tag="OY092_001512"
     CDS             14287..15726
                     /locus_tag="OY092_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HCX1076457.1"
                     /translation="MAQKNNNVIPMTFDDAFYRKMANQKFKQREYKRAAEYFEKVLEL
                     SPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKA
                     FLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKD
                     AKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTL
                     LLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKF
                     LSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPL
                     LQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLD
                     FIHRGLLTLYHNELFVSENDVMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQP
                     RNVTKNQITTWLGITQYKLNKMIEFLLSI"
     gene            15793..16728
                     /gene="trxB"
                     /locus_tag="OY092_001513"
     CDS             15793..16728
                     /gene="trxB"
                     /locus_tag="OY092_001513"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HCX1076458.1"
                     /translation="MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMA
                     NTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKEL
                     TAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG
                     TFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTL
                     TSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAG
                     DVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA"
BASE COUNT         6193 a         2332 c         3341 g         5150 t
ORIGIN      
        1 cttgttgtca acagaatgtg aatgaagtat gtcataaata tatttatatt gattctacaa
       61 atgagtaaat aagtataatt ttctaactat aaatgataag atatattgtt gtaggccaaa
      121 cagtttttta gctaaaggag cgaacgaaat gggattttta tcaaaaattc ttgatggcaa
      181 taataaagaa attaaacagt taggtaaact tgctgataaa gtaatcgctt tagaagaaaa
      241 aacggcaatt ttaactgatg aagaaattcg taataaaacg aaacaattcc aaacagaatt
      301 agctgacatt gataatgtca aaaagcaaaa tgattattta gataaaattt taccagaagc
      361 atatgcactt gttagagaag gctctaaacg tgtattcaat atgacaccat ataaagttca
      421 aattatgggt ggtattgcaa ttcataaagg tgatatcgct gagatgagaa caggtgaagg
      481 taaaacgtta acagcgacaa tgccaacata cttaaatgca ttagctggta gaggtgttca
      541 cgttattaca gtcaatgaat atttatcaag tgttcaaagt gaagaaatgg ctgagttata
      601 taacttctta ggtttgactg tcggattaaa cttaaacagt aagacgactg aagaaaaacg
      661 tgaagcatat gcgcaagaca ttacttacag tactaacaat gagttaggtt ttgactattt
      721 aagagataac atggtgaatt attctgaaga tagagtaatg cgtccattac atttcgcaat
      781 cattgatgag gttgactcaa ttttaattga tgaggcacgt acgccattaa ttatttctgg
      841 tgaagctgaa aagtcaacgt cactttatac acaagcaaat gtttttgcga aaatgttaaa
      901 gcaggacgaa gattataaat atgatgaaaa aacaaaagca gtacatttaa cagaacaagg
      961 tgcggataaa gctgaacgta tgttcaaagt tgaaaactta tatgatgtac aaaatgttga
     1021 tgttattagt catatcaaca cagctttacg tgcgcacgtt acattgcaac gtgacgtaga
     1081 ctatatggtt gttgatggcg aagtattaat tgtcgaccaa tttacaggac gtacaatgcc
     1141 aggccgtcgt ttctcggaag gtttacacca agctattgaa gcgaaggaag gcgttcaaat
     1201 tcaaaatgaa tctaaaacta tggcgtctat tacattccaa aactatttca gaatgtacaa
     1261 taaacttgcg ggtatgacag gtacagctaa aactgaagaa gaagaattta gaaatattta
     1321 taacatgaca gtaactcaaa ttccgacaaa taaacctgtg caacgtaacg ataagtctga
     1381 tttaatttac attagccaaa aaggtaaatt tgatgcagta gtagaagatg ttgttgaaaa
     1441 acacaaggca gggcaaccag tgctattagg tactgttgca gttgagactt ctgaatatat
     1501 ttcaaattta ctaaaaaaac gtggtatccg tcatgatgtg ttaaatgcga aaaatcatga
     1561 acgtgaagct gaaattgttg caggcgctgg acaaaaaggt gccgttacta ttgccactaa
     1621 catggctggt cgtggtacag atatcaaatt aggtgaaggc gtagaggaat taggcggttt
     1681 agcagtaata ggtacagaac gacatgaatc tcgtcgtatt gatgaccagt tacgtggtcg
     1741 ttctggacgt caaggtgata aaggggatag tcgcttctat ttatcattac aagatgaatt
     1801 aatgattcgt tttggttctg aacgtttaca gaaaatgatg agccgactag gtttagatga
     1861 ctctacacca attgaatcaa aaatggtatc aagagctgta gaatcagcac aaaaacgtgt
     1921 agaaggtaat aacttcgacg cgcgtaaacg tatcttagaa tacgatgaag tattacgtaa
     1981 acaacgtgaa attatctata acgaaagaaa tagtattatt gatgaagaag acagctctca
     2041 agttgtagat gcaatgctac gttcaacgtt acaacgtagt atcaattact atattaatac
     2101 agcagatgac gagcctgaat atcaaccatt catcgactac atcaatgaca ttttcttaca
     2161 agaaggtgac attacagagg atgatatcaa aggtaaagat gctgaagata ttttcgaagt
     2221 cgtttgggct aagattgaag cagcatatca aagtcaaaaa gatatcttag aagaacaaat
     2281 gaatgagttt gagcgtatga ttttacttcg ttctattgat agccattgga ctgatcatat
     2341 cgacacaatg gatcaattac gtcaaggtat tcacttacgt tcttatgcac agcaaaatcc
     2401 attacgtgac tatcaaaatg aaggtcatga attatttgat atcatgatgc aaaatatcga
     2461 agaagatact tgtaaattca ttttaaaatc tgtagtacaa gttgaagaca atattgaacg
     2521 tgaaaaaaca acagagtttg gtgaagcgaa gcacgtttca gctgaagatg gtaaagaaaa
     2581 agtgaaaccg aaaccaatcg ttaaaggcga tcaagttggt cgtaacgatg attgtccatg
     2641 tggtagtggt aaaaaattca aaaattgcca tggaaaataa atgatataaa ataactcctt
     2701 ccaattaaac acctatagtt tgtgttatgg gaggagtctt tttattttac aagcgttaaa
     2761 tactttaaaa aatgtgaaga agttgttaaa cgttgttatg tacttagttt taaaaaatag
     2821 gtttaggcat atatcgatga taaatgtact gatttttaac aataaaagca taaactgatt
     2881 gtcagtgtgc ttatatttct taacattgtt atttaacaaa attatgttaa aatttagcat
     2941 tataaatgat acaaatcaat gacttgaatt gaattataaa taggagcgaa ggctatggaa
     3001 ttatcagaaa tcaaacgaaa tatagataag tataatcaag atttaacaca aattaggggg
     3061 tctctttgac ttagagaaca aagaaactaa tattcaagaa tatgaagaaa tgatggcaga
     3121 acctaatttt tgggataacc aaacgaaagc gcaagatatt atagataaaa ataatgcgtt
     3181 aaaagcaata gttaatggtt ataaaacact acaagcagaa gtagatgaca tggatgctac
     3241 ttgggattta ttacaagaag aatttgatga agaaatgaaa gaagacttag agcaagaggt
     3301 catttatttt aaggctaaag tggatgaata cgaattgcaa ttattattag atgggcctca
     3361 cgatgccaat aatgcaattc tagagttaca tcctggtgca ggtggcacgg agtctcaaga
     3421 ttgggctaat atgctattta gaatgtatca acgttattgt gagaagaaag gttttaaagt
     3481 tgaaactgtt gattatttac ctggagatga agcagggatt aaaagtgtaa cattgctcat
     3541 caaagggcat aatgcttatg gttatttaaa agctgaaaaa ggtgtacacc gactagtacg
     3601 aatttctcca tttgattcat caggacgtcg tcatacatca tttgcatcat gtgacgtgat
     3661 tccagatttt aataatgatg aaatagagat tgaaatcaat ccggatgata ttacagttga
     3721 tacattcaga gcttctggtg caggtggtca gcatattaac aaaactgaat cggcaatacg
     3781 aattacccac cacccctcag gtatagttgt taataaccaa aatgaacgtt ctcaaattaa
     3841 aaaccgtgaa gcagctatga aaatgttaaa gtctaaatta tatcaattaa aattggaaga
     3901 gcaggcacgt gaaatggctg aaattcgtgg cgaacaaaaa gaaatcggat ggggaagcca
     3961 aattagatca tatgttttcc atccatactc aatggtgaaa gatcatcgta cgaacgaaga
     4021 aacaggtaag gttgatgcag tgatggatgg agatattgga ccatttatcg aatcatattt
     4081 aagacagaca atgtcacacg attaatatat attttaaaac cgaggctcta aaagggcgtc
     4141 ggtttttggt tttttatagg tagctaaata aattgtaaat tagattttgg aatatgattt
     4201 gtttatgaat atttaagtac aattgggtag atagggttag aatatatttt ttaaaagttg
     4261 tgtttgttaa aacaacatat gcagtgtgca tttagtaata ttacctatgg cgattttcga
     4321 ggtattgaat taatcgttga aaacgttctc aattacatgg tatgaataca ttttacacta
     4381 tgataaaagg ttgtattctt tttatattgt taaccatttg attacatcgt tataacaata
     4441 gcttttgaca aaatgtattg tgctatagta tttgcatact taaaattcta acagcaaagg
     4501 aatgacagca agatgaaaaa atctcttaca gtgacggttt cgtcagtgtt agctttttta
     4561 gctttaaata atgcagcaca tgcacaacaa catggcacac aagtaaaaac acctgttcaa
     4621 cataattatg tatcaaatgt tcaagcacaa acgcaatcac cgacaactta tacagtagtt
     4681 gctggcgatt cattatataa gattgcatta gagcatcact taacgttgaa tcaattatat
     4741 tcatacaatc ctggtgtaac acctttaatt tttcctggtg acgtgatttc acttgtgcct
     4801 caaaataaag tgaaacaaac taaagcggtt aaatcaccag taagaaaagc aagccaagct
     4861 aaaaaggtag tacaacaacc tgtacaacaa gcgtctaaaa aagtagtagt taagcaagca
     4921 cctaagcaag cagtagctaa gacagttaat gtagcataca aacctgctca agtacaaaaa
     4981 tcagttccaa ctgtacctgt tgcacataac tacaataaat cagttgctaa cagaggaaac
     5041 ttatatgctt atggaaactg cacatattat gctttcgatc gtcgtgcaca attaggtaga
     5101 agtataggaa gtttatgggg caatgcaaat aactggaatt acgcagcaaa agttgcagga
     5161 tttaaagtag ataaaacacc agaagttggc gctattttcc aaacagctgc tggcccatat
     5221 ggacatgttg gtgttgttga atctgtaaac cctaatggaa caattactgt ttctgaaatg
     5281 aactatgctg gatttaatgt taaatcttca agaacaattt taaatccagg aaaatataat
     5341 tacatccact aagtaatata tcaagacaag actatcctct tagcctgttt aagtaacagg
     5401 ttgagaggat tttttggtat catttaatca gagttatata aagaagatat ttaaatgata
     5461 tttaattgat tgatatgtaa aaagaaagta taatttatga ttaattaatg gaggaggtaa
     5521 ttgaaatggg tgtacatcaa tattttaaaa gattatcaga tatggaaaga cttataagat
     5581 tacctggaaa atttaaatat tttgaacaca atgttgcagc acactccttt aaagtaacta
     5641 aaattgctca atatctagca acagttgaag aatatcatgg acgaaagatt aattggaaaa
     5701 gcttatatga aaaagcatta aatcatgatt tcgctgaagt gtttactggt gatataaaaa
     5761 cacctgttaa atatgcgagt agtgaattaa aaaaattatt ttcgcaagtt gaagaagaaa
     5821 tggtagagac ctttattgaa gaagaaattc cattacaata tagagatgtt tataagcaac
     5881 gactgcaaga aggtaaagat gattcattag aaggccaaat actttcagtt gctgataaaa
     5941 ttgatttgct ttatgaaaca tttggagaaa tacaaaaacg taatcctgaa gaattatttt
     6001 tcgaaattta tgaaatgagt ctagaaacaa ttattcaatt cgaccattta gcatctgtac
     6061 aagattttat taataatatc attccagaaa tgttgactga aaactttata cctagaacag
     6121 aattaagaga aacaaccatg aacattttaa ataaaagaaa agaggaaaat gaatgatatg
     6181 gtattttagc gcagcattct ttccatgtgt cttggtagta ttatttagtg taataacaag
     6241 aagtaaatgg gtcggtacta ttctgacatt aattttaatt ggtgcctcaa tctataaaga
     6301 gtatttccat aacgagtgga ttatttttat tgatgtagtg tcattattag ctggttattt
     6361 aattatagat caactcgaat ttcataaaca tcaagatgaa gatcgctaag attaacttta
     6421 aaataatgtt tcaaacaaat ttgttgaaac aaaatgatga ttaatataat gtgtatttac
     6481 atactaaaaa taacaagata aacgatttga tttaaggcaa gcatagttag cacaactatg
     6541 tttgtttttc tttgttcgat atttttacga acaaacgttt gctttttgtg tgactacttt
     6601 gctaaaatat gtaatgagaa agcgaagagt tgagcggaaa tataaataat acgttgaaag
     6661 aggaggtata tgtgacaatg gttgaacatt atccttttaa aatacattct gattttgagc
     6721 ctcaaggtga ccaaccgcaa gcaattaagg aaatcgtgga aggtattaaa gcggggaaaa
     6781 gacatcaaac tttattaggt gcaactggca cagggaaaac atttacgatg agtaatgtta
     6841 ttaaagaagt tgggaaacca acgttaatta tcgcgcataa caaaacatta gcaggacaat
     6901 tatatagtga gtttaaagaa ttttttcctg aaaacagggt ggaatacttt gtaagttact
     6961 atgattatta tcaacctgag gcatacgtac cgtctactga cacttttatt gaaaaagatg
     7021 cctcaatcaa tgatgaaatt gatcaactac gacattctgc tacaagtgca ttatttgaac
     7081 gcgatgatgt aattattatt gctagtgtaa gttgtatata tggtttaggt aatcctgaag
     7141 aatataaaga tttagtagta agtgttcgag ttggtatgga aatggataga agtgaattac
     7201 ttagaaaact tgtagatgtg caatatacac gaaatgacat cgatttccaa cgaggaacgt
     7261 ttcgagtgcg tggtgatgta gttgaaatat tcccagcctc taaagaagaa ctttgtataa
     7321 gggttgagtt tttcggcgat gagattgacc gtatccgaga agttaactac ctaacaggtg
     7381 aagtgttgaa agaaagagaa cattttgcga tattcccagc ttctcacttc gtaacacgtg
     7441 aagaaaagtt gaaagttgcg attgaacgta ttgaaaaaga attggaagaa cgattgaaag
     7501 aattacgaaa tgagaataaa ttactagaag cgcaaaggtt agaacagcgt accaactatg
     7561 atttagaaat gatgcgagag atgggattct gttcaggaat tgaaaactat tccgtacatt
     7621 taactttgcg accactgggt tcgacaccat atactttatt ggattacttt ggcgatgatt
     7681 ggttagtaat gattgatgaa tcacatgtga cattaccgca agttcgaggc atgtataacg
     7741 gagacagagc gcgtaaacaa gttttggtgg atcatggatt tagattaccg agtgcattag
     7801 ataaccgtcc tcttaaattt gaagaatttg aagaaaagac aaaacaactt gtgtatgtat
     7861 ctgcaacgcc tggaccatac gaaattgaac atacggataa gatggttgaa caaattattc
     7921 gtcctactgg tttactggat cctaagattg aggttagacc tactgaaaat caaattgacg
     7981 atttattaag tgaaattcaa acaagggttg aacgtaatga acgcgtactt gttacaacgc
     8041 tcactaaaaa gatgagtgaa gatttaacca catacatgaa agaagcgggt attaaagtta
     8101 attatctgca ttcagaaatc aagacattag aacgaatcga aataattaga gacttacgaa
     8161 tgggtacata tgatgttatc gtaggtatta atttattaag agagggtatt gatataccag
     8221 aagtttctct agttgtcata ttagatgcag ataaagaagg atttttacgt tctaaccgct
     8281 ctttaattca aacaataggt agagctgcgc gtaacgataa aggtgaagtc attatgtatg
     8341 ccgataaaat gactgattcg atgaagtatg caattgatga gacacaacgt cgtcgagaaa
     8401 tacagatgaa acataatgaa aaacatggta ttacacctaa aacaattaat aaaaaaatac
     8461 atgatttaat tagtgctact gttgaaaatg acgaaaataa tgacaaagca caaactgtga
     8521 tacctaagaa gatgacgaaa aaagaacgtc aaaagacaat cgacaatata gaaaaagaaa
     8581 tgaaacaagc agcgaaagat ttagatttcg agaaagctac agaattaaga gatatgttat
     8641 ttgaattaaa agcagaaggg tgacaagtaa atgaaagaac catccatagt agtaaaaggt
     8701 gctcgtgcgc ataacttgaa agatattgat atcgaactac ctaaaaataa attaattgtt
     8761 atgacaggat tatctgggtc aggtaaatcg tcattagcat tcgatactat atatgctgaa
     8821 ggacaacgac gttatgttga atcattaagt gcctatgcgc gtcaattttt aggccaaatg
     8881 gacaaaccag atgttgatac aatcgaagga ttatcgccag caatttcaat agatcaaaaa
     8941 acaacaagta aaaatccaag atcaactgtt gcaacagtaa cagaaatata tgattatata
     9001 cgtttgttat atgcacgtgt tggtaaacct tactgtccaa atcacaatat agaaattgaa
     9061 tcacaaacag tacaacaaat ggttgaccgc attatggagt tagaggcacg tacaaagatt
     9121 caattattag cacctgtcat cgctcatcgt aaaggtagtc atgaaaagct aatcgaagat
     9181 attggtaaaa aaggttatgt acgtttaaga atcgatggcg aaattgttga tgtaaatgat
     9241 gtacctacat tagataagaa caagaatcat acaatagaag ttgttgtaga ccgattagtt
     9301 gttaaagatg gaattgaaac acgactagct gactctatag aaactgcgtt agagctttca
     9361 gaaggacaat taacagttga tgtcattgac ggggaagacc ttaagttttc agaaagccat
     9421 gcttgtccta tatgtggatt ttcaatcgga gaattagaac caagaatgtt tagctttaat
     9481 agtccttttg gtgcttgtcc aacatgtgat ggcttaggcc aaaagttaac agtcgatgta
     9541 gacttggttg ttccagacaa agataagacg ctaaacgaag gtgcaataga accttggata
     9601 ccgacgagtt ctgattttta tccaacattg ttaaaacgtg tttgtgaagt ttataaaatc
     9661 aatatggata aaccttttaa aaagttaaca gaacgtcaac gtgatatttt attgtatggt
     9721 tcgggtgaca aagaaattga atttacattt acacaacgtc aaggtggtac tagaaaacga
     9781 acaatggttt tcgagggtgt agttcctaat ataagtagac gattccatga atctccttca
     9841 gaatatacac gtgaaatgat gagtaaatat atgactgaac taccttgtga aacttgtcat
     9901 ggaaagcgat tgagtcgtga agcgttatct gtttatgtag gtggtttaaa tattggtgaa
     9961 gtagtcgaat actcaatcag tcaagcgctg aactattata aaaacattga tttgtcagaa
    10021 caagatcaag cgattgcaaa tcaaatattg aaagaaatta tttcccgact cactttttta
    10081 aataatgtcg gacttgaata tttaacgcta aacagagctt caggtacact ttcaggtggt
    10141 gaagcacaac gtattcgatt ggcaacgcaa attgggtcgc gtttgactgg tgtcttatat
    10201 gtattagatg agccatcaat tggactgcat caaagagata atgatcgatt aattaataca
    10261 cttaaagaaa tgagagattt aggaaatact ttaattgtag ttgaacacga tgatgataca
    10321 atgcgtgcgg ctgattactt agtggatata gggcctggtg ctggtgaaca tggaggacaa
    10381 attgtgtcta gtgggacacc tcaaaaggta atgaaagata aaaaatcttt aacaggacaa
    10441 tacttgagtg gtaagaaacg tattgacgta cctgaatatc gcagaccggc ttcagatcgt
    10501 aaaatttcta tacgtggagc tagaagtaac aaccttaaag gcgttgatgt ggacatacca
    10561 ctatcaatca tgacggtcgt tacaggtgta tcaggttctg gtaaaagctc attagtaaat
    10621 gaagtattat acaaatcatt agctcaaaaa atcaataaat ctaaagtaaa gccaggattg
    10681 tacgataaga ttgaaggtat tgatcaactt gataaaatta ttgatattga tcaatcaccg
    10741 ataggtagaa cgccacgctc taatccagca acatatactg gtgtgtttga tgatatacgt
    10801 gatgtgtttg cgcaaacaaa tgaagctaaa atccgaggat atcaaaaagg acgttttagt
    10861 tttaatgtaa aaggtggacg ctgtgaagct tgtaaaggtg acggtattat taaaattgaa
    10921 atgcattttt tacctgatgt ttatgttcct tgtgaagtgt gtgatggtaa acgatataat
    10981 cgtgagacac tagaggttac ttacaaaggt aaaaatattg ctgacatttt agaaatgact
    11041 gttgaagaag caacacaatt ttttgaaaat attcctaaga ttaagcgcaa gttacaaaca
    11101 ctagttgatg ttggtcttgg atacgtcaca ttaggtcaac aagctacaac gttatcaggt
    11161 ggtgaggctc aacgtgtgaa acttgcatct gaacttcata aacgttcaac tggtaaatct
    11221 atttatatcc tagacgaacc aacaacaggg ttacatgttg acgatattag cagattatta
    11281 aaagtattaa accgattagt tgaaaatggt gatactgttg taattattga acataaccta
    11341 gatgttatca aaacagcaga ctatattatc gacttaggtc ctgaaggtgg tagtggcggt
    11401 ggtactattg ttgcgactgg cacacccgaa gatattgctc agacaaagtc atcctataca
    11461 ggaaagtatt taaaagaagt acttgaacga gataaacaaa atactgaaga taaataagat
    11521 taaaagaagt gaaggatgtt gtaaatttat ccttcacttc tttttattaa tttagtaatg
    11581 aatagtagaa agaaaagaag cgtaaaaaga attatgttaa gatagggtca atctagagtt
    11641 gctaaacata aatcgaactg ggagtgggac agaaatgata ttttcgcaaa atttatttcg
    11701 tcgtcccacc ccaactagca ttgtctgtag aaattgggaa tccaatttct ctgtgttggg
    11761 gccctgccaa ctaattccaa tatatcattt tagagtttag gtcattgatt tatggcttgg
    11821 acttttatgt cgatatgaac catgtaaatt aagcattcaa taaattaatg attgatattg
    11881 acttgtaaaa taataacaat aatgaacaat taatatttat tttagctttt caatgtagat
    11941 tggtgttata tttttgatat gataagaaga gatgtaagag tagggataaa tacaattgag
    12001 gtgaacccat gttaacgaca gaaaaactag ttgaaacatt aaagttagat ttaatcgctg
    12061 gtgaagaagg actatcgaag ccaattaaaa atgctgatat atcaagaccg ggcttagaga
    12121 tggcaggtta tttttcacat tatgcgtcag atagaataca actattagga acaacggaac
    12181 tatcgtttta caatttatta ccagataagg atcgcgcagg tcgtatgcgt aaactatgca
    12241 gaccagaaac gcctgcaatt attgtgacac gtggattgca gccaccagaa gaattagttg
    12301 aagctgcaaa agaattaaat acgccactta tagttgctaa agatgcaact acaagtttaa
    12361 tgagtcgatt aacaacgttt ttagagcatg cacttgcaaa gacgacatct ttacatggtg
    12421 ttttagtgga tgtttacggt gtaggcgtat taattaccgg tgattctggt attggtaaaa
    12481 gtgagactgc gttagaatta gtgaagcgtg ggcatagact agtagcagat gataatgtag
    12541 aaatacgtca aattaataaa gatgaactaa tagggaaacc accaaagtta atagaacatc
    12601 tattagaaat acgtggacta ggtattatca atgttatgac tttatttggc gcgggttcaa
    12661 tattaactga aaaacgaatt agattaaata ttaatttgga aaactggaac aagcaaaagt
    12721 tatatgaccg cgtaggtctt aatgaagaga cgttaagtat tttagatact gaaataacta
    12781 aaaaaacaat acctgtaaga cctggtagaa atgttgcggt aattattgag gtcgctgcaa
    12841 tgaactatcg attaaatatc atgggcatta acactgccga agaatttagt gaaagattaa
    12901 atgaagaaat tatcaagaac agtcataaga gtgaggagta ggttgaatgg gtattgtatt
    12961 taactatata gatcctgtgg catttaactt aggaccactg agtgtacgat ggtatggaat
    13021 tatcattgct gtcggaatac tacttggtta ctttgttgca caacgtgcac tagttaaagc
    13081 aggattacat aaagatactt tagtagatat tattttttat agtgcactat ttggatttat
    13141 cgcggcacga atctatttcg tgattttcca atggccatat tacgcggaaa atccaggtga
    13201 aattattaaa atatggcatg gtggtatagc aatacatggt ggtttaatag gtggctttat
    13261 tgctggtgtt attgtatgta aagtgaaaaa tttaaaccca tttcaaattg gtgatatcgt
    13321 tgcgccaagt ataattttag cgcaaggaat tggacgctgg ggtaacttta tgaatcacga
    13381 ggcacatggt ggacctgtgt cacgcgcttt tttagaacaa ttacatttgc ctaattttat
    13441 aatagaaaat atgtatatca acggccaata ttatcatcca acattcttat atgaatccat
    13501 ttgggatgtc gctggattta ttatcttagt taatattcgt aaacatttaa aattaggaga
    13561 aacattcttt ttatatttaa cttggtattc aattggtcga ttctttatag aaggattacg
    13621 tacagatagc ttaatgctca caagtaatat tagagttgca caattagtat caattctttt
    13681 aattttaata agtataagtt taattgtata tagaaggatt aagtataatc caccgttgta
    13741 tagcaaagtt ggggcgcttc catggccaac aaaaaaagtg aagtagtgat attttgagaa
    13801 aatttttatc aaaaacacat catcatacaa accctttatg gcgtgtatac cgtcttgtta
    13861 aattttcgaa agtttttaag aatgtaatta tcattgaatt ttcgaaattt attccaagta
    13921 tggtactgaa aagacatata tataaacaac ttttaaatat taatatcggt aatcaatcgt
    13981 cgatagctta caaagtaatg ttagatattt tttacccaga actgattacg attggtagta
    14041 acagtgttat tggttacaat gtaacaattt tgacgcatga agcattagtt gatgaatttc
    14101 gttatggacc agtgacgata ggatctaaca ctttgattgg tgcaaatgct accattttac
    14161 ccggtataac gattggtgac aatgtaaaag ttgcagctgg tacggttgtt tcaaaagata
    14221 taccggataa tggatttgca tatggcaacc ctatgtatat aaaaatgatt aggaggtgac
    14281 aattttatgg cgcaaaagaa taataacgta attccaatga cttttgatga tgcattttat
    14341 cgtaaaatgg ctaatcagaa gtttaaacaa agagaatata aacgagctgc tgaatacttt
    14401 gaaaaagtgt tagaattgtc acctgatgat ctggaaattc aaattgatta tgcacaatgt
    14461 ctagtgcaac ttggtattgc taaaaaagca gaacatttat tttatgacaa tattatttat
    14521 aataggcatc tagaagatag cttttatgaa ttgagtcagc tcaacattga agttaacgaa
    14581 ccaaacaagg cattcttgtt tggtattaat tatgttattg ttagcgacga ccaagattat
    14641 agagatgaat tagatcaaat gtttgatgtg aaatatcaaa gtgaagaaca aattgaactt
    14701 gaagctcaat tgtttgtagt tcaaatacta ttccaatatc ttttttctca aggtcgatta
    14761 aaagatgcaa agaattatgt cttacatcaa ccacaagaag ttcaagatca tcgtgtcgta
    14821 cgtaatttat tggcaatgtg ttatttatat ctcggcgaat atgacacggc taaagcattg
    14881 tacgaagcac tattacaaga ggatagtaca gatatatatg cattatgcca ttatactttg
    14941 ctactttata acactaagga aaatgaacaa taccaaaaat atttaaaaat attaaataaa
    15001 gttgtaccta tgaatgacga tgaaagtttt aaattaggta ttgttttaag ttatttaaag
    15061 cagtatcgtg catcacaaca attgttgtac cctttatata aaaaagggaa atttttatca
    15121 attcaaatgt acaatgcttt agcatataat tattattatt taggtgaaga agacgaaagt
    15181 cattactact gggataaatt gaagcaaatt tctaaagtgg aaattggaca tgcgccttgg
    15241 gtaattgaaa atagcaaaga agttttcgac caacatattt tgccattact tcaaagtgat
    15301 gacagtcatt atcgtttata tggtattttt ttattggatc aattaaatgg taaagaaatt
    15361 gtgatgacgg aaagtatttg gcaggttctg gaaaatctaa ataattatga gaaattgtat
    15421 ttaacgtatt tagttcaagg tttaacgctc aataaattag acttcattca tcgcggcttg
    15481 ttaacgcttt accataatga attatttgtg agtgaaaatg atgtaatggt tgcatggatt
    15541 aatcaaggtg aactcataat tgctgaaaaa gtagatttaa ctgatgttga gccatatatc
    15601 ggtgcgttta tttatttgta ttttaaaaat caacctcgaa atgttacaaa gaaccaaatt
    15661 acaacatggt taggcataac acaatataaa ctgaacaaaa tgattgaatt tctcttgagc
    15721 atatagattt atgaaaagtt agatttatta tataatgcgc ataatgatta ataatgagga
    15781 ggcgttaata aaatgactga aatagatttt gatatagcaa ttatcggtgc aggtccagct
    15841 ggtatgactg ctgcagtata cgcatcacgt gctaatttaa aaacagttat gattgaaaga
    15901 ggtattccag gcggtcaaat ggctaataca gaagaagtag agaacttccc tggtttcgaa
    15961 atgattacag gtccagattt atctacaaaa atgtttgaac acgctaaaaa gtttggtgca
    16021 gtttatcaat atggagatat taaatctgta gaagataaag gcgaatataa agtgattaac
    16081 tttggtaaca aagaattaac agctaaagcg gtcattattg ctacaggtgc agaatacaag
    16141 aaaattggtg ttccgggtga acaagaactt ggtggacgcg gtgtaagtta ttgtgcagta
    16201 tgtgatggtg cattctttaa aaataaacgc ctattcgtta tcggtggtgg tgactcagca
    16261 gtagaagagg gaacattctt aactaaattt gctgacaaag taacaattgt tcaccgtcgt
    16321 gatgagttac gtgcacaacg tattttacaa gatagagcat tcaaaaatga taaaatcgac
    16381 tttatttgga gtcatacttt gaaatcaatt aatgaaaaag acggcaaagt gggttctgtg
    16441 acattaacgt ctacaaaaga tggttcagaa gaaacacacg aggctgatgg tgtattcatc
    16501 tatattggta tgaaaccatt aacagcgcca tttaaagact taggtattac aaatgatgtt
    16561 ggttatattg taacaaaaga tgatatgaca acatcagtac caggtatttt tgcagcagga
    16621 gatgttcgcg acaaaggttt acgccaaatt gtcactgcta ccggcgatgg tagtattgca
    16681 gcgcaaagtg cagcggaata tattgaacat ttaaacgatc aagcttaatt cgaagtcgaa
    16741 ttaagatgtt gagttgtaaa ttatttagat atttatttta atagtgtcat cacattgtta
    16801 aaataatgtc ttacttttaa attaaagcaa attatataga aaactagaac ttagtacgta
    16861 tcatttgtgc gtttcaatga gttctagttt ttttatatgt tatattaaac ttataacttt
    16921 atgggagtag gacagaaatg ataaagagcc actaatgatt tattatgtag tggttcttac
    16981 acattagccc agctaatgtg tacttaaaaa taggaa
//
LOCUS       DAKPJH010000054        16858 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.054, whole genome shotgun sequence.
ACCESSION   DAKPJH010000054 DAKPJH010000000
VERSION     DAKPJH010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16858
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.054"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(182..1129)
                     /locus_tag="OY092_001514"
     CDS             complement(182..1129)
                     /locus_tag="OY092_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HCX1076459.1"
                     /translation="MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWI
                     HLLCTMLKYSNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIW
                     ILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTV
                     IYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVI
                     IFLILAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKG
                     LLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ"
     gene            1378..1566
                     /locus_tag="OY092_001515"
     CDS             1378..1566
                     /locus_tag="OY092_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCX1076460.1"
                     /translation="MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKKERSLDNMSL
                     KNAELLYKFANSIFSNEN"
     gene            complement(2035..2108)
                     /locus_tag="OY092_001516"
     tRNA            complement(2035..2108)
                     /locus_tag="OY092_001516"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2072..2074),aa:Arg,seq:tct)
     gene            2472..2606
                     /locus_tag="OY092_001517"
     CDS             2472..2606
                     /locus_tag="OY092_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HCX1076461.1"
                     /translation="MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
                     "
     gene            2663..2797
                     /locus_tag="OY092_001518"
     CDS             2663..2797
                     /locus_tag="OY092_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HCX1076462.1"
                     /translation="MTGLAEAIANTVQAAQQHDSVKLGTSIVDIVANGVGLLGKLFGF
                     "
     gene            2921..3616
                     /locus_tag="OY092_001519"
     CDS             2921..3616
                     /locus_tag="OY092_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HCX1076463.1"
                     /translation="MGKLGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDF
                     LTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQMEVDGHRADVLFRNGLAEAKV
                     KYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPN
                     PEFFNYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDY
                     EINSWKQLNDIVR"
     gene            complement(3722..4162)
                     /locus_tag="OY092_001520"
     CDS             complement(3722..4162)
                     /locus_tag="OY092_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCX1076464.1"
                     /translation="MSEIKRLEINYKTDELFENFRAFGNKDLYMVNELNGQMIDASSD
                     SPFYGIFVGDQLGARMALLKKGDVEEIYFPDFEDYILLWKLEVLPKYQNRGYASELID
                     FAKSFNMPIKAIGRNDSKDFFLHHGFTDVEAKNIEGHDVLLWKP"
     gene            4357..5970
                     /gene="bshC"
                     /locus_tag="OY092_001521"
     CDS             4357..5970
                     /gene="bshC"
                     /locus_tag="OY092_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HCX1076465.1"
                     /translation="MDCKVVSLNEKDQFIPKIKSSDPVITGLFQYDAAQQTSFEKRMS
                     KENNGREAALANVIREYMSDLKLSSEQELNIQHLANGSKVVIGGQQAGLFGGPLYTFH
                     KIFSIITLSKELTDTHKQQVVPVFWIAGEDHDFDEVNHTFVYNENHGSLHKVKYHTME
                     MPETTVSRYYPDKAELKQTLKTMFILMKETVHTQGLLEICDRIIDQYDSWTDMFKAIL
                     HETFKAYGVLFIDAQFEPLRKMEAPMFKKILKKHQLLDDAFRATQQRTQNQGLNAMIQ
                     TDTNVHLFLHDENMRQLVSYDGKHFKLNKTDKTYIKEEIINIAENQPELFSNNVVTRP
                     LMEEWLFNTVAFVGGPSEIKYWAELKDVFELFDVEMPIVMPRLRITYLNDRIEKLLSK
                     YNIPLEKVLVDGVEGERSKFIREQASHQFIEKVEGMIEQQRRLNQDLLDEVAGNQNNI
                     NLVNKNNEIHIQQYDYLLKRYLLNIERENEISMKQFREIQETLHPMGGLQERIWNPLQ
                     ILNDFGTDVFKPSTYPPLSYTFDHIIIKP"
     gene            6114..6545
                     /gene="mraZ"
                     /locus_tag="OY092_001522"
     CDS             6114..6545
                     /gene="mraZ"
                     /locus_tag="OY092_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HCX1076466.1"
                     /translation="MFMGEYDHQLDTKGRMIIPSKFRYDLNERFIITRGLDKCLFGYT
                     LDEWQQIEEKMKTLPMTKKDARKFMRMFFSGAVEVELDKQGRINIPQNLRKYANLTKE
                     CTVIGVSNRIEIWDRETWNDFYEESEESFEDIAEDLIDFDF"
     gene            6561..7496
                     /gene="rsmH"
                     /locus_tag="OY092_001523"
     CDS             6561..7496
                     /gene="rsmH"
                     /locus_tag="OY092_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HCX1076467.1"
                     /translation="MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLND
                     DGRLIAIDQDQTAIDNAKEVLKDHLHKVTFVHSNFRELTQILKDLNIEKVDGIYYDLG
                     VSSPQLDIPERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFS
                     KQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELS
                     AFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTP
                     KLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK"
     gene            7510..7911
                     /gene="ftsL"
                     /locus_tag="OY092_001524"
     CDS             7510..7911
                     /gene="ftsL"
                     /locus_tag="OY092_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HCX1076468.1"
                     /translation="MAVEKVYQPYDEQVYNSIPKQQPQTKPEKKTVSRKVVVQLTKFE
                     KVLYITLITVIAMLSIYMLSLKMDAYDTRGKIADLDYKIDKQSSENSALQSEIKKNSS
                     YERIYEKAKKQGMSLENDNVKVVRSNGEAKN"
     gene            7892..10126
                     /locus_tag="OY092_001525"
     CDS             7892..10126
                     /locus_tag="OY092_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HCX1076469.1"
                     /translation="MAKQKIKIKKNKIGAVLLVGLFGLLFFILVLRISYIMITGHSNG
                     QDLVMKANEKYLVKNAQQPERGKIYDRNGKVLAEDVERYKLVAVIDKKASANSKKPRH
                     VVDKKETAKKLSTVIDMKPEEIEKRLSQKKAFQIEFGRKGTNLTYQDKLKIEKMNLPG
                     ISLLPETERFYPNGNFASHLIGRAQKNPDTGELKGALGVEKIFDSYLSGSKGSLRYIH
                     DIWGYIAPNTKKEKQPKRGDDVHLTIDSNIQVFVEEALDGMVERYQPKDLFAVVMDAK
                     TGEILAYSQRPTFNPETGKDFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGAFDPDK
                     KYKSGHRDIMGSRISDWNRVGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERF
                     GFGKSTKGMFDGEAPGQIGWSNELQQKTSSFGQSTTVTPVQMLQAQSAFFNDGNMLKP
                     WFVNSVENPVSKRQFYKGQKQIAGKPITKDTAEKVEKQLDLVVNSKKSHAANYRIDGY
                     EVEGKTGTAQVAAPNGGGYVKGPNPYFVSFMGDAPKKNPKVIVYAGMSLAQKNDQEAY
                     ELGVSKAFKPIMENTLKYLNVGKSKDDTSNAEYSKVPDVEGQDKQKAIDNVSAKSLEP
                     VTIGTGTQIKAQSIKAGNKVLPHSKVLLLTDGDLTMPDMTGWTKEDVIAFENLTNIKV
                     NLKGSGFVSHQSISKGQKLTEKDKIDVEFSSENVDSNSTNNSDSNSDDKKKSDSKTDK
                     DKSD"
     gene            10418..11383
                     /locus_tag="OY092_001526"
     CDS             10418..11383
                     /locus_tag="OY092_001526"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HCX1076470.1"
                     /translation="MIFVYALLALVITFVLVPVLIPTLKRMKFGQSIREEGPQSHMKK
                     TGTPTMGGLTFLLSIVITSLVAIIFVDQANPIILLLFVTIGFGLIGFIDDYIIVVKKN
                     NQGLTSKQKFLAQIGIAIIFFVLSNVFHLVNFSTSIHIPFTNVAIPLSFAYVIFIVFW
                     QVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFVLGETAIGIFCIIMLFALLGFLPY
                     NINPAKVFMGDTGSLALGGIFATISIMLNQELSLIFIGLVFVIETLSVMLQVASFKLT
                     GKRIFKMSPIHHHFELIGWSEWKVVTVFWAVGLISGLIGLWIGVH"
     gene            11385..12734
                     /locus_tag="OY092_001527"
     CDS             11385..12734
                     /locus_tag="OY092_001527"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HCX1076471.1"
                     /translation="MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLS
                     QDAHAKDLESMGISVVSGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEV
                     ELSYLISEAPIIAVTGTNGKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPT
                     DYLVTELSSFQLLGIEKYKPHIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDY
                     LICNYHQRQVIESEELKAKTLYFSTQQEVDGIYIKDSFIVYKGVRIINTEDLVLPGEH
                     NLENILAAVLACILAGVPIKAIIDSLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLA
                     TQFALNSFNQPIIWLCGGLDRGNEFDELIPYMENVRAMVVFGQTKAKFAKLGNSQGKS
                     VIEANNVEDAVDKVQDIIEPNDVVLLSPACASWDQYSTFEERGEKFIERFRAHLPSY"
     gene            12750..14069
                     /locus_tag="OY092_001528"
     CDS             12750..14069
                     /locus_tag="OY092_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HCX1076472.1"
                     /translation="MDDKTKNDQQESNEDKDELELFTRNTSKKRRQRKRSKATHFSNQ
                     NKDDTSQQTDFDEEIYLINKDFKKEESNDENNDSASSHANNNNIDDSTDSNIENEDYR
                     YNQEIDDQNESNGIAVDNEQPQSAPKEQNSDSNDEETVTKKERKSKVTQLKPLTLEEK
                     RKLRRKRQKRIQYSVITILVLLIAVILIYMFSPLSKIAHVNINGNNHVSTSKINKVLG
                     VKNDSRMYTFSKKNAINDLEEDPLIKSVEIHKQLPNTLNVDITENEIIALVKYKGKYL
                     PLLENGKLLKGSNDVKINDAPVMDGFKGTKEDDMIKALSEMTPEVRRYIAEVTYAPSK
                     NKQSRIELFTTDGLQVIGDISTISKKMKYYPQMSQSLSRDSSGKLKTRGYIDLSVGAS
                     FIPYRGNTSSQSESDKNVTKSSQEENQAKEELQSVLNKINKQSSKNN"
     gene            14175..15581
                     /gene="ftsA"
                     /locus_tag="OY092_001529"
     CDS             14175..15581
                     /gene="ftsA"
                     /locus_tag="OY092_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HCX1076473.1"
                     /translation="MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNG
                     LIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDESNEIDFYEDTEING
                     SHIEKVLEGIREKNDVQETEVINVFPIRFIVDKENEVSDPKELIARHSLKVEAGVIAI
                     QKSILINMIKCVEACGVDVLDVYSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYE
                     RGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQV
                     DSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKE
                     LLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAFDELLDYVTINYHDNEETEED
                     VIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQEHKQNHEHVQ
                     DKDKEESKFKKLMKSLFE"
     gene            15614..16786
                     /gene="ftsZ"
                     /locus_tag="OY092_001530"
     CDS             15614..16786
                     /gene="ftsZ"
                     /locus_tag="OY092_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HCX1076474.1"
                     /translation="MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAIN
                     TDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVT
                     SGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDT
                     LIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM
                     SNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQ
                     EAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKPTSHGRKSGSTGFGTS
                     VNTSSNATSKDESFTSNSSNAQATDSVSERTHTTKEDDIPSFIRNREERRSRRTRR"
BASE COUNT         6256 a         2298 c         3191 g         5113 t
ORIGIN      
        1 ggttagagtg aaacgtgttt atgaactaga cgttctagta tagttactac agctttagtc
       61 agaaggtatc attgatatga tcatattaaa tcaaagaggc attgatatac actaaaaaga
      121 ggcaagatta cctgcctctt ttttagttat taaatatgcg tgttaattct tggtaatagt
      181 gttactgaga cgcattacga agaaatttat cttgattttc cttttttaaa aagaagtgaa
      241 gatatcctat aaagactcta agtactatta cagtagctaa taacacttcg ataaacaaaa
      301 gacctttcca aatgtctgga aacataagta caggcaaact gttctttaaa gcagttgctg
      361 agattactaa agggaatgtg aaagctgaaa atacgggcga aaaaggttct tttagtaatt
      421 taggcaattg tataatgata taaaaataaa atatttgagc taatattaaa aatataatta
      481 cgataaaagc attcgcctta ggaaatgcta taacatatgc tgcagcgact aaagaaaatg
      541 gtgcacaaat tgtcgatgtg ttcggtttga ttgacgtctg caatggaaat gcttttaatc
      601 gcttgaaaac aataggtaag acaatacaag tagctacaaa gccatatatt actgttaatt
      661 gacctatgaa aaaatatccg ctaacgggtg ccgtcaatcc tgcgatagca ataccaataa
      721 aaagtacagt ccacgaagga taaacatttt caagtgaaaa atcttttaaa tattttattg
      781 aaaaaataat catatgcgtc ataattccca caaggcataa aatccaaata ggcgttatta
      841 agctattgat aaaagttatg ttactaaaaa atgtatttaa ataagtagta cctaaaaagc
      901 cagacatgaa aaatgttgtg aacactgatg aaactagagg actgtttaat tgttctttca
      961 cattattaga atatttgagc atagtacata aaaggtgaat ccaaatcaag aaagcaaaga
     1021 ttccgcaaac agcgtttaaa gtaagagata agtcttttaa tagattaccc aggcctaata
     1081 atcctaagac tagtcctgac gttactaaag gtgctttttg aagtctcatg atttacaacc
     1141 tttcttatgt gattttcttc actaattata tcatgatagc tatggccaat taataagaag
     1201 agtgtgtact attacgttat tagagtatgt atattggatt gatagacaca taattgacat
     1261 ttaaatctca aaattaatga tatttgaggt atgctttgca acctaaatat tggaatatgt
     1321 ggaaaagtaa ttatttaatt taaatgatga ttgaagattt acaagggggt gtacaaaatg
     1381 agaaatcaaa ttcaaaaact attagacagt gatttgagca gtttacatat atcgaaacaa
     1441 acaggagttc cacaaagcac aatacacaga atgagaaaaa aagaaagatc attagacaat
     1501 atgtcattga aaaacgctga actactttat aaatttgcca atagtatatt tagcaatgaa
     1561 aattaagaag aataattagt gaattaaata attaaaaaac cacgtcttga tggacgtggt
     1621 tattttttta agatgtatat aattatagga tttcgggtcc ctgaaaagtc cctaaaattt
     1681 tgaatagtat caaaatctat aagaataata taataataaa aatctctacg catgcaaatg
     1741 gtgagtgtta aaaatcttgg tgtagtgttg gtgtagttca ggtgcagtat agatgaaatt
     1801 tgagcacaaa attacttaat taaaaatgta taaacaagtg tcagacgcgt gtcaattgtg
     1861 tgtcaaaaaa ttctataacg aataagcatg cttgttttaa ttactgtatt ttcggggctt
     1921 atgcggggga cgttttggtg acgcatcata ctataatact gaaattcaaa acaaaaagag
     1981 ccccgtaatc acggaactct tttgtttggt aatgcgtata aaaataccta taaacgtcct
     2041 gggagggatt cgaacccccg accgatggct tagaaggcca ttgctctatc cagctgagct
     2101 accaggacac gtttaacaac acaagaatta ttatatctaa atgaacttaa attagcaata
     2161 ccttgtaaat aaaaaatgtt tatatttttc actattatag agctatttat ctaaaaaggt
     2221 tcaataagac ttaaatacga attcaggcaa cttaattgtg ttaaatacag ttttgaatgc
     2281 ctaactgtat ttcttttctc tttaaaatac agttaagtac attataagat gttgtgcgga
     2341 taaacaaact aattgcatca aatttatttt aaaataacaa caacaaaacg ttaagcgaat
     2401 aacatttcgg tgatttaaaa gctacgcacg tttttgttat cttcaaattt aaattttaag
     2461 gagtgttttc aatggaaggt ttatttaacg caattaaaga taccgtaact gcagcaatta
     2521 ataatgacgg cgcaaaatta ggcacaagca ttgtgagcat cgttgaaaat ggcgtaggtt
     2581 tattaggtaa attattcgga ttctaatatc aatatgttat gtaagtaata agtattattt
     2641 caaaggtgag ggagagattt aaatgactgg actagcagaa gcaatcgcaa atactgtgca
     2701 agctgcacaa caacatgata gtgtgaaatt aggcacaagt atcgtagaca tcgttgctaa
     2761 cggtgtgggt ttactaggta aattatttgg attctaatat aataactaat attctttaaa
     2821 ataaactggg tgagcatact ttaatgttat gcactcagtt tattttattt gcagaaattt
     2881 gagcctctgt taagatttag atacatagac aatataggag atggggaaat tgggatataa
     2941 aaatattttg atagactttg atgatacaat tgttgatttt tatgatgcag aagaatgggc
     3001 gtttcactat atggcgaatg tttttaatca taaagcaaca aaagatgatt ttttaacatt
     3061 taaaaaaatc aatcaccaac attgggaagc ttttcaacaa aataaattaa cgaagtctga
     3121 agtattatca gaacgatttg tgaattactt caaacatcat caaatggaag ttgatgggca
     3181 tcgtgcagat gtgttattta gaaatggatt agcagaagct aaagttaaat actttgatca
     3241 aacattagaa acaattgtcg aattatcgaa aagacatgat ttatatattg ttactaatgg
     3301 tgtaaccgaa acgcaaaaga gaaggttaaa tcagacgccg ttgcataaat atattaaaaa
     3361 gatatttata tctgaggaaa caggatatca aaaacctaat ccggaatttt ttaattatgt
     3421 ttttaatgat attggtgagg atgaaagaca gcactcgatt atagttggag attctttaac
     3481 atctgacatt ctaggtggaa tcaatgcggg tatagctact tgctggttta attttagagg
     3541 atttgatcat aatccaggaa ttatacctga ttatgaaatt aattcatgga aacaactaaa
     3601 tgatattgta cgttaagaca aataatttga aaatgattta ctattagctt aagaaagtaa
     3661 ttgtaaaaaa gacactacga aaagatgcat tttcatgctc gtagtgtcga atattattgt
     3721 cttatggttt ccacaataag acatcatgtc cctctatatt tttagcttcc acatctgtaa
     3781 atccatgatg taaaaagaaa tccttagaat catttctgcc aatggcttta attggcatgt
     3841 tgaaactctt tgcaaaatca atcaattctg aagcgtaccc tctgttttga tattttggta
     3901 atacttctaa cttccataat aatatataat cttcaaaatc tgggaagtag atttcttcga
     3961 catcaccttt ttttagtaat gccattctag ctcctaattg atctccgaca aatatgccat
     4021 aaaatggtga atctgaactt gcatcaatca tttgaccgtt taactcattg accatgtata
     4081 agtctttgtt gccaaacgct ctaaagtttt cgaataattc gtcagttttg taattaattt
     4141 caagacgttt gatttcactc atatttatct accccttatt tgtttactac tattattata
     4201 cattaaacca cttgtgtttt tcattgattt gaaaatgtaa aacaatgaat attataaatt
     4261 ttccatgatt aaattgattt tcaagccgta aaattgtcaa tcaccggtat agactttata
     4321 ctatagtttg taatcgcgta cttaaggaga aaaaacatgg actgtaaagt agttagttta
     4381 aatgaaaaag atcagtttat accaaaaata aagagcagtg accctgtaat aacaggatta
     4441 tttcaatatg acgcagctca acaaactagt tttgaaaaaa ggatgtctaa agaaaataat
     4501 ggaagagaag cggcattagc gaatgttatt cgtgaatata tgagtgattt aaagctttct
     4561 agtgaacaag aattaaacat acaacattta gctaatggtt caaaagttgt gattggtgga
     4621 caacaagcag ggcttttcgg gggaccattg tatacattcc ataaaatatt ttcaatcatt
     4681 actttatcta aggaattaac ggatacacat aagcaacaag tagtaccagt tttttggatt
     4741 gcaggagaag atcatgattt cgatgaagtg aatcatacat ttgtttataa cgaaaatcat
     4801 gggtcgctgc ataaggttaa atatcataca atggagatgc cagagacgac tgtctctaga
     4861 tattatcctg ataaggctga gttgaaacaa actttaaaaa cgatgttcat tcttatgaaa
     4921 gaaactgttc atacacaagg tctactggag atttgtgaca gaattattga ccaatatgac
     4981 tcgtggactg atatgtttaa agcaatactg catgaaacat ttaaagcata tggcgttcta
     5041 tttatagatg cgcagtttga gccgttaaga aaaatggaag cgcctatgtt taaaaagatt
     5101 ttgaaaaaac atcagttgct tgatgatgct tttagagcaa cacaacaacg tactcaaaat
     5161 caaggcttga atgcgatgat acaaacagat acaaatgttc atttattctt acatgatgaa
     5221 aatatgcgtc aattagtttc gtatgatggt aagcatttta aattaaataa aacagataag
     5281 acatatataa aggaagaaat tataaatatt gcggaaaatc aacctgaatt attttctaat
     5341 aatgtagtga caagaccatt aatggaagaa tggttattta acacggtggc atttgttgga
     5401 ggaccgagtg aaattaagta ctgggctgaa ctaaaagatg tatttgaact atttgatgtt
     5461 gaaatgccta tcgtgatgcc aaggcttaga attacttatt taaatgaccg tatagaaaaa
     5521 ttactttcga aatacaatat tccattagaa aaagtgttag tcgatggtgt tgaaggagaa
     5581 agaagtaagt ttattagaga acaagcatca catcaattta ttgaaaaggt agaaggtatg
     5641 attgaacaac agcgtcgtct aaaccaagac ttattagatg aagtggcggg gaatcaaaat
     5701 aatattaacc ttgtgaataa aaataatgaa attcatatac aacagtatga ttatttgtta
     5761 aaacgttatc ttttaaacat tgaaagagaa aacgagatca gtatgaagca atttagagaa
     5821 attcaagaaa cactccatcc aatgggagga ttacaagaaa gaatatggaa tccacttcaa
     5881 attttgaatg attttgggac agatgtgttc aagccctcca cctatccacc actttcttac
     5941 acttttgatc atattattat aaaaccttaa tataccaagg gtttagcccg atttatctta
     6001 atgataaatc gggcattttt ttgtttttta aaataaattt cacaaatttt gtataaatag
     6061 tggtggatag tggggagatg tggtaaatta tatataaggt gaggtgataa aaaatgttca
     6121 tgggagaata cgatcatcaa ttagatacaa aaggacgtat gattataccg tccaagtttc
     6181 gttatgactt aaatgagcgt tttattatca caagaggcct tgataaatgt ttattcggtt
     6241 acactctaga cgaatggcaa cagattgaag agaaaatgaa aaccttacct atgacaaaaa
     6301 aagacgcacg taagtttatg cgtatgttct tctctggtgc tgttgaagta gaacttgata
     6361 agcaagggcg tattaacatc cctcaaaact tgaggaaata cgctaattta actaaagaat
     6421 gtacagtaat cggtgtttca aatcgtattg agatttggga tagagaaact tggaatgatt
     6481 tctatgaaga atctgaagaa agtttcgaag atattgctga agatttaata gattttgatt
     6541 tttaaaatgg aggaattgaa gtgtttcatc atatcagcgt tatgttaaac gaaaccattg
     6601 attatttaaa tgtaaaagaa aatggtgtgt acattgactg tacgctaggt ggagcgggac
     6661 atgcccttta tttactaaat caattaaatg acgacggaag attaatagca atcgatcaag
     6721 accaaactgc aattgataat gctaaagagg tattgaagga tcatttgcat aaggtgactt
     6781 ttgttcatag caacttccgt gaattaactc aaatattaaa agacttaaac attgaaaaag
     6841 tagatggaat ttattacgac ttgggtgttt caagcccaca actcgacatt ccagaacgag
     6901 gattcagtta tcaccatgac gcaacattag acatgcgtat ggaccaaaca caagaactaa
     6961 cagcatatga aattgttaac aattggtcat atgaagcgtt agtgaagatt ttttatcgtt
     7021 atggcgagga gaaattttca aaacagatag ctcgaagaat cgaagcacat cgtgaacaac
     7081 aaccaataac aacaacatta gaattagttg acattataaa agaaggtatt cctgcaaaag
     7141 caagaagaaa aggcggacat cctgcaaaac gagtatttca agcactacga attgcagtaa
     7201 acgatgaatt gtcagctttt gaagattcaa tagaacaagc gattgaatta gtgaaagtag
     7261 acggcaggat atcggtaatc actttccatt ctttagaaga tcgtttatgt aaacaggtgt
     7321 tccaagaata tgaaaaaggt ccagaggtac caagaggatt accagttata ccagaagcat
     7381 atacacctaa gttaaagcgt gttaatcgta aaccgattac cgctacagaa gaagatttag
     7441 atgacaataa cagagcacga agcgcgaaat tacgtgtagc tgaaatactt aaataaggag
     7501 caatttataa tggctgtaga aaaagtgtac caaccatatg acgaacaagt ttataatagt
     7561 ataccgaagc aacaaccaca aactaagccc gaaaagaaga ctgtttcgag aaaagtggtt
     7621 gtacaattaa ctaaatttga aaaagtttta tacataactt tgattactgt aattgctatg
     7681 ttaagtattt atatgctatc tttaaaaatg gatgcgtatg atacgcgagg aaagattgca
     7741 gatttagatt ataaaataga taaacaatca agtgaaaaca gtgctttaca atctgaaatc
     7801 aaaaagaatt cttcttatga acgcatatac gaaaaggcta agaaacaggg gatgagcctt
     7861 gagaacgata atgtaaaggt agtgcgtagt aatggcgaag caaaaaatta aaattaaaaa
     7921 aaataaaata ggggcagtcc tacttgttgg tttattcgga ctgctctttt ttatattggt
     7981 tttaagaatt tcatatatca tgattactgg acattctaat ggtcaagatt tagtcatgaa
     8041 ggcaaatgaa aagtatttag ttaagaatgc acaacaacca gaacgaggga agatatatga
     8101 tcgtaatggt aaagtgctag cagaagatgt agaaagatat aaacttgttg cagtaataga
     8161 taaaaaggcg agtgccaatt ctaaaaaacc taggcatgta gttgataaaa aagagactgc
     8221 aaagaaatta tctacagtca ttgatatgaa gccagaggaa attgaaaaga gacttagtca
     8281 aaagaaagct ttccaaattg aatttggacg caaaggaaca aatttaacgt atcaggacaa
     8341 attgaaaata gagaaaatga atttgcctgg tatttcttta ttgcctgaaa cagaacgctt
     8401 ttatccaaat ggcaattttg catcacactt aattggtaga gctcagaaaa atccagatac
     8461 tggtgaactt aaaggtgcgc ttggagttga aaagattttt gatagttatt taagtggatc
     8521 taaaggatca ttgagatata ttcatgatat ttggggatat atcgcaccaa atactaaaaa
     8581 agagaagcag cctaaacgtg gtgatgatgt ccatttaaca atcgattcaa atattcaagt
     8641 atttgttgaa gaagctttag atggcatggt tgaaagatac cagccgaaag atttatttgc
     8701 ggttgtcatg gatgccaaaa ctggagaaat tttagcatac agtcagcgac caacatttaa
     8761 tcctgaaact ggtaaagact ttggtaaaaa gtgggcaaat gacctatatc aaaatacata
     8821 cgagcctgga tcaacattta aatcatatgg gttagcagct gctattcaag aaggtgcttt
     8881 tgatcctgat aagaaatata aatctggaca tagagatatt atgggttcac gtatttcaga
     8941 ctggaataga gtcggttggg gtgaaatccc aatgtcactc ggatttactt attcatctaa
     9001 tacattgatg atgcatttac aagatttagt tggtgcagac aaaatgaaat cttggtatga
     9061 acgatttgga tttggaaaat caactaaagg tatgtttgat ggagaagcac ctggtcaaat
     9121 tggatggagt aatgagttgc aacaaaaaac gtcatcattt ggtcaatcga caactgtaac
     9181 acctgttcaa atgttacaag cgcaatcagc gttctttaat gatggtaata tgttaaaacc
     9241 atggtttgtg aatagcgttg aaaatcctgt tagtaaaaga caattttata aaggtcaaaa
     9301 acaaatcgca ggcaaaccaa taacaaaaga tactgctgaa aaagttgaaa agcaattgga
     9361 tttagttgtg aatagtaaga agagtcacgc tgcaaactat cgtattgatg gttatgaggt
     9421 cgaaggtaag actggtacag cacaagtcgc tgcacctaat ggtggtggat acgttaaagg
     9481 tccaaaccca tattttgtaa gttttatggg tgacgcgccg aagaaaaatc ctaaagttat
     9541 tgtatacgct ggtatgagct tggcacaaaa aaatgaccaa gaagcttatg aattaggtgt
     9601 tagtaaagcg tttaaaccaa taatggaaaa tactttgaaa tatttaaatg taggtaaatc
     9661 aaaagatgac acatctaatg cagagtatag taaagtgcca gatgttgaag gtcaagacaa
     9721 acaaaaagct attgataatg tgagtgcaaa atcattagaa ccagttacta tcggtactgg
     9781 cacacaaata aaagcacaat ctataaaagc agggaataaa gtcttacctc atagtaaagt
     9841 actgttatta acagatggag acttaactat gcctgacatg acaggatgga cgaaagaaga
     9901 tgtcattgct tttgaaaacc taacaaatat taaagtaaat ttaaaaggta gcggttttgt
     9961 gtcccaccaa tcaattagta agggacaaaa acttactgaa aaagataaaa tagacgtaga
    10021 attttcatca gagaatgtag acagcaattc gacgaataat tctgattcga attcagatga
    10081 taagaagaaa tctgacagta aaactgacaa ggataagtcg gactaacaag aatggctaca
    10141 ttaaataagg gtgtattgtc actatttgtt tttactaaag taatgctgtg atagaaaaca
    10201 acatcttcat ttaatcttta taaataagtg ttgatagaga attttaaggt agacgaggtc
    10261 agattaactt gtttgttata ggcaaacttt ttatactggc ctcttatgcc gtaaaaaaga
    10321 aaaattataa attttgatta caactttgtt tatttaattg aaaaattgat aatatattag
    10381 tggttaaaaa agtctggatt aagaagagga gatagttatg atttttgtat atgcgttatt
    10441 agcgctagtg attacatttg ttttggtacc tgttttaata cctacattaa aaaggatgaa
    10501 atttggtcaa agtattcgag aagaaggtcc acaaagccat atgaagaaga ctggtacacc
    10561 aacgatgggt ggactaacat ttctattaag tattgtgata acgtctttgg tggctattat
    10621 atttgtagat caagctaatc caatcatact gttattattt gtgacgattg gttttgggtt
    10681 aattggtttt atagatgatt atattattgt tgttaaaaag aataaccaag gtttaacaag
    10741 taaacagaag tttttggcgc aaattggtat tgcgattatt ttctttgttt taagtaatgt
    10801 gtttcatttg gtgaattttt ctacgagcat acatattcca tttacgaatg tagcaatccc
    10861 actatcattt gcatatgtta ttttcattgt tttttggcaa gtaggttttt ctaatgcggt
    10921 aaatttaaca gatggtttag atggattagc aactggactg tcaattatcg gatttacaat
    10981 gtatgccatc atgagctttg tgttaggaga aacggcaatt ggtattttct gtatcattat
    11041 gttgtttgca cttttaggat ttttaccata taacattaac cctgctaaag tgtttatggg
    11101 agatacaggt agcttagctt taggtggtat atttgctacg atttcaatca tgcttaatca
    11161 ggaattatca ttaattttta taggtttagt attcgtaatt gaaacattat ccgttatgtt
    11221 acaagtcgct agctttaaat tgactggaaa gcgtatattt aaaatgagtc cgattcatca
    11281 tcattttgaa ttgataggat ggagcgaatg gaaagtagtt acagtatttt gggccgttgg
    11341 tctgatttca ggtttaatcg gtttatggat tggagtgcat taagatgctt aattatacag
    11401 ggttagaaaa taaaaatgta ttagttgtcg gtttggcaaa aagtggttat gaagcagcta
    11461 aattattaag taaattaggt gcgaatgtaa ctgtcaatga tggaaaagac ttatcacaag
    11521 atgctcatgc aaaagattta gaatctatgg gcatttctgt tgtaagtgga agtcatccat
    11581 taacgttgct tgataataat ccaataattg ttaaaaatcc tggaatacct tatacagtat
    11641 ctattattga tgaagcagtg aaacgaggtt tgaaaatttt aacagaagtt gagttaagtt
    11701 atctaatctc tgaagcacca atcatagctg taacgggtac aaatggtaaa acgacagtta
    11761 cttctctaat tggagatatg tttaaaaaaa gtcgcttaac tggaagatta tccggcaata
    11821 ttggttatgt tgcatctaaa gtagcacaag aagtaaagcc tacagattat ttagttacag
    11881 agttgtcgtc attccagtta cttggaatcg aaaagtataa accacacatt gctataatta
    11941 ctaacattta ttcggcgcat cttgattacc atgaaaattt agaaaactat caaaatgcta
    12001 aaaagcaaat atataaaaat caaacggaag aagattattt gatttgtaat tatcatcaaa
    12061 gacaagtgat agagtcggaa gaattaaaag ctaagacatt gtatttctca actcaacaag
    12121 aagttgatgg tatttatatt aaagatagtt ttatcgttta taaaggtgtt cgtattatta
    12181 acactgaaga tctagtattg cctggtgaac ataatttaga aaatatatta gcagctgtgc
    12241 ttgcttgtat tttagctggt gtacctatta aagcaattat tgatagttta actacatttt
    12301 caggaataga gcatagattg caatatgttg gtactaatag aactaataaa tattataatg
    12361 attccaaagc aacaaacacg ctagcaacac agtttgcctt aaattcattt aatcaaccaa
    12421 tcatttggtt atgtggtggt ttggatcgag ggaatgaatt tgacgaactc attccttata
    12481 tggaaaatgt tcgcgcgatg gttgtattcg gacaaacgaa agctaagttt gctaaactag
    12541 gtaatagtca agggaaatcg gtcattgaag cgaacaatgt cgaagacgct gttgataaag
    12601 tacaagatat tatagaacca aatgatgttg tattattgtc acctgcttgt gcgagttggg
    12661 atcaatatag tacttttgaa gagcgtggag agaaatttat tgaaagattc cgtgcccatt
    12721 taccatctta ttaaagggtg tgagtattga tggatgataa aacgaagaac gatcaacaag
    12781 aatcaaatga agataaagat gaattagaat tatttacgag gaatacatct aagaaaagac
    12841 ggcaaagaaa aagatcaaag gctacacatt tttctaatca aaataaagat gatacatctc
    12901 aacaaactga ttttgatgaa gaaatttact tgataaataa agacttcaaa aaagaagaaa
    12961 gcaatgatga aaataatgat tctgcttcta gtcatgcgaa taataataat atcgatgatt
    13021 ctacagactc taatattgaa aatgaggatt atagatataa tcaagaaatt gacgaccaaa
    13081 atgaatcgaa tggaattgca gtcgacaacg aacaacctca atcagctcct aaagaacaaa
    13141 atagcgactc gaatgatgag gaaacagtaa cgaaaaaaga acgaaaaagt aaagtaacac
    13201 aattaaagcc attaacactt gaagaaaagc ggaagttaag acgtaagcga caaaaacgaa
    13261 tccaatacag tgttattaca atattggtat tgttgattgc tgttatatta atttacatgt
    13321 tttcaccact tagtaaaatt gcgcatgtaa atataaatgg aaataatcac gttagtactt
    13381 caaagataaa caaagtttta ggtgttaaaa atgattcaag gatgtatacg tttagtaaaa
    13441 aaaatgctat taatgatctc gaagaggatc cattaatcaa aagtgttgag atacacaagc
    13501 aattaccaaa cacattaaac gtagatatca cagaaaatga aattattgct ttagtgaaat
    13561 ataaaggtaa atatttacct ttattagaaa atggtaaatt gcttaaaggt tcaaatgatg
    13621 tcaaaattaa tgatgcacct gtcatggatg gtttcaaagg tacaaaagaa gatgatatga
    13681 ttaaggcgtt atctgaaatg acacctgaag ttagacgata tattgccgaa gtgacatacg
    13741 ccccaagtaa aaacaaacaa agcagaattg aattgtttac gacagatgga cttcaagtaa
    13801 tcggtgatat ttcgacgata tctaagaaaa tgaaatatta tccgcagatg tcacaatcat
    13861 tatcaaggga tagttcgggt aaactaaaaa cacgaggcta tattgattta tcagtcggtg
    13921 cttcatttat cccataccgt ggaaacacgt ctagtcaatc agaaagcgat aaaaatgtga
    13981 ctaaatcatc tcaagaggaa aatcaagcaa aagaagaatt acaaagcgtt ttaaacaaaa
    14041 ttaacaaaca atcaagtaag aataattaaa aaattttgat attgtctatg tttatagttc
    14101 acaagccatt caacgtattg taaactaagg atagtgtatt tttttaatag taatttgtca
    14161 ggaggtgcct atctatggaa gaacattact acgtaagtat tgatattgga tcatcaagcg
    14221 taaaaacaat agtaggcgag aaatttcaca atggtataaa tgtgataggt acaggacaaa
    14281 cctacacgag cggtataaaa aatggtttaa ttgatgattt tgatattgcg cgacaagcaa
    14341 tcaaagacac aattaaaaag gcatcaatcg cttcgggtgt tgatattaaa gaagttttcc
    14401 tgaaattacc tatcattgga acggaagttt atgatgaatc aaatgaaatc gacttttatg
    14461 aggatacaga aatcaacggt tcacatatcg aaaaagtatt agaaggtatt agagaaaaaa
    14521 atgatgtgca agaaacagaa gtaattaatg tgttcccgat tcgttttata gtcgataaag
    14581 aaaatgaggt ttcagaccct aaagaattaa ttgccagaca ttcattaaag gttgaagcag
    14641 gcgtaattgc tattcaaaaa tcgattttaa ttaatatgat taaatgcgtt gaagcatgtg
    14701 gtgttgatgt attagatgtt tactctgatg catataacta tggttcaatc ctaacagcta
    14761 ctgaaaaaga gttaggtgca tgtgtcattg atattggtga agacgttacg caagttgctt
    14821 tttatgaacg cggtgaatta gtagatgctg attctatcga aatggcaggg cgtgatatta
    14881 cagacgatat tgcacaagga ttaaacactt cttatgaaac tgctgaaaaa gttaaacacc
    14941 aatatggtca tgcattctat gattctgctt cagatcaaga tatcttcact gttgaacagg
    15001 ttgatagtga tgaaacagta cagtatactc aaaaagattt gagtgacttt attgaagcac
    15061 gtgtagaaga aatattcttc gaagtatttg atgttttaca agatttagga ttaacaaaag
    15121 taaatggtgg gtttattgta actggtggat ctgcaaactt acttggcgta aaagaattat
    15181 tatcagatat ggtaagtgaa aaagttagaa ttcacacgcc atcgcaaatg ggaattagaa
    15241 aacctgaatt ttcttcagca atttctacaa tttctagtag tatcgctttt gatgagttat
    15301 tagattatgt tacaattaat tatcatgata atgaagaaac tgaagaagat gttattgatg
    15361 tgaaagacaa agataacgaa tctaaattag gcggatttga ttggtttaaa cgtaaaacaa
    15421 acaaaaaaga tactcatgaa aatgaagtag agtcaacaga tgaagaaatt tatcaatcag
    15481 aagataatca tcaggaacat aaacagaatc atgaacatgt tcaagacaaa gataaagaag
    15541 aaagtaaatt caaaaaacta atgaaatctc tatttgaatg attattggcc aataaaacta
    15601 ggaggaaatt taaatgttag aatttgaaca aggatttaat catttagcga ctttaaaggt
    15661 cattggtgta ggtggtggcg gtaacaacgc cgtaaaccga atgattgacc atggaatgaa
    15721 taatgttgaa tttatcgcta tcaacacaga cggtcaagct ttaaacttat ctaaagctga
    15781 atctaaaatc caaatcggtg aaaaattaac acgtggttta ggagcaggag ctaatcctga
    15841 aatcggtaaa aaagctgcag aggaatctcg tgaacaaatt gaagatgcaa tccaaggtgc
    15901 agacatggta tttgttactt ctggtatggg tggcggaact ggtactggtg cagcaccagt
    15961 cgttgctaaa attgcaaaag aaatgggcgc attaactgtt ggtgttgtaa ctcgtccatt
    16021 tagttttgaa ggacgtaaac gtcaaactca agctgctgct ggagtagaag ctatgaaagc
    16081 tgcagtagat acattaatcg ttataccaaa tgaccgttta ttagatatcg ttgacaaatc
    16141 tacgccaatg atggaagcat ttaaagaagc tgataacgtg ttacgccaag gtgtacaagg
    16201 tatctcagac ttaatcgctg tttctggtga agtaaactta gactttgcag acgttaagac
    16261 aattatgtct aaccaaggtt ctgcattaat gggtattggt gtttcttctg gtgaaaatag
    16321 agcggtagaa gctgctaaaa aagcaatctc ttctccatta cttgaaacat ctatcgttgg
    16381 tgcacaaggt gtgcttatga atattactgg tggcgagtca ttgtcattat ttgaagcaca
    16441 agaggctgct gatattgtcc aagatgctgc agatgaagac gttaatatga ttttcggtac
    16501 agttattaat cctgaattac aagatgagat tgttgtaaca gttattgcaa ctggttttga
    16561 tgacaaacca acatcacatg gtcgtaaatc tggtagcact ggattcggaa caagcgtaaa
    16621 tacttctagc aatgcaactt ctaaagatga atcattcact tcaaattcat caaatgcaca
    16681 agcaactgat agtgtaagtg aaagaacaca tacaactaaa gaagatgata ttcctagctt
    16741 cattagaaat agagaagaaa gacgttcaag aagaacaaga cgttaatcgg ttaatatata
    16801 tacacaaata attcaacaca aatcatcaga taacatatct gatgattttt ttactaat
//
LOCUS       DAKPJH010000055        16702 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.055, whole genome shotgun sequence.
ACCESSION   DAKPJH010000055 DAKPJH010000000
VERSION     DAKPJH010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.055"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            101..475
                     /locus_tag="OY092_001531"
     CDS             101..475
                     /locus_tag="OY092_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HCX1076475.1"
                     /translation="MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYIS
                     ENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRK
                     KIESLLSRVNKRITEANNEIEL"
     gene            complement(726..1514)
                     /locus_tag="OY092_001532"
     CDS             complement(726..1514)
                     /locus_tag="OY092_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076476.1"
                     /translation="MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLA
                     SSYNVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLF
                     TDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEK
                     TMKWYQKQRIYSTKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDK
                     NHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLNFLKSVS"
     gene            complement(1683..2399)
                     /locus_tag="OY092_001533"
     CDS             complement(1683..2399)
                     /locus_tag="OY092_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076477.1"
                     /translation="MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKD
                     QDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMS
                     LFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIP
                     ITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIW
                     ILLVVLVIYFTIRLSSRTRL"
     gene            complement(2561..3067)
                     /locus_tag="OY092_001534"
     CDS             complement(2561..3067)
                     /locus_tag="OY092_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076478.1"
                     /translation="MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQ
                     SLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTH
                     ISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIK
                     LYRIDLEK"
     gene            complement(3203..4003)
                     /locus_tag="OY092_001535"
     CDS             complement(3203..4003)
                     /locus_tag="OY092_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076479.1"
                     /translation="MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELA
                     KSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADI
                     SVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRK
                     MNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLE
                     AKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTASFINKHHDEKHV"
     gene            complement(3987..4706)
                     /locus_tag="OY092_001536"
     CDS             complement(3987..4706)
                     /locus_tag="OY092_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1076480.1"
                     /translation="MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQL
                     ADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTL
                     YTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFED
                     MIDQLGVLPEQIMYVGDDALNDVAPARAMSMVSVWYKQEDAEIEPLEEEVDFTITTVE
                     ELLTILPIKNDNKGENYGSIY"
     gene            complement(4761..5711)
                     /locus_tag="OY092_001537"
     CDS             complement(4761..5711)
                     /locus_tag="OY092_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HCX1076481.1"
                     /translation="MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLP
                     RLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPV
                     FSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTI
                     ANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLIT
                     YIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVM
                     ADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH"
     gene            complement(5860..6747)
                     /locus_tag="OY092_001538"
     CDS             complement(5860..6747)
                     /locus_tag="OY092_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCX1076482.1"
                     /translation="MKKSLIAFILIFMLVLSGCGMKDNHKQGSDDNGSSKSPYHRIVS
                     LMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILA
                     HESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEET
                     KDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGW
                     NPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTRIEVVNGDEVSR
                     PGPRIDEGLKELRDAIYRK"
     gene            complement(7120..7755)
                     /locus_tag="OY092_001539"
     CDS             complement(7120..7755)
                     /locus_tag="OY092_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HCX1076483.1"
                     /translation="MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNA
                     EIALNQIKEHTHFNPNHILELSIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQ
                     EINERYKGELRKELLSLKGIGSETADVLLVYIFGRIVFIPDSYTRKIYDKLGYENTKS
                     YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK"
     gene            complement(8089..9750)
                     /locus_tag="OY092_001540"
     CDS             complement(8089..9750)
                     /locus_tag="OY092_001540"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HCX1076484.1"
                     /translation="MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDY
                     ATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAII
                     PEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYN
                     VTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHP
                     EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAK
                     MKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILI
                     DLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLR
                     EIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAK
                     EQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFH
                     KFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM"
     gene            complement(9747..10163)
                     /locus_tag="OY092_001541"
     CDS             complement(9747..10163)
                     /locus_tag="OY092_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HCX1076485.1"
                     /translation="MDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQI
                     EDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILH
                     FVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE"
     gene            complement(10256..10363)
                     /locus_tag="OY092_001542"
     CDS             complement(10256..10363)
                     /locus_tag="OY092_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076486.1"
                     /translation="MKDSENLVFFGFEVLFVFYKMAYIYEALIKYGIVN"
     gene            complement(10440..11450)
                     /gene="adhP"
                     /locus_tag="OY092_001543"
     CDS             complement(10440..11450)
                     /gene="adhP"
                     /locus_tag="OY092_001543"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HCX1076487.1"
                     /translation="MRAAVVTKDHKVSIEDKKIRALKPGEALVQTEYCGVCHTDLHVK
                     NADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETL
                     CRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVK
                     PGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDP
                     VAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVL
                     DGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVI
                     KF"
     gene            complement(11949..12470)
                     /locus_tag="OY092_001544"
     CDS             complement(11949..12470)
                     /locus_tag="OY092_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwhD family protein"
                     /protein_id="HCX1076488.1"
                     /translation="MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFID
                     VANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAG
                     LTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGM
                     WKHSSDALHQAFN"
     gene            complement(12498..13793)
                     /locus_tag="OY092_001545"
     CDS             complement(12498..13793)
                     /locus_tag="OY092_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HCX1076489.1"
                     /translation="MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLR
                     RIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALL
                     HDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHH
                     NKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMH
                     AVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFE
                     ETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISE
                     LQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIH
                     SITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN"
     gene            complement(13833..14309)
                     /locus_tag="OY092_001546"
     CDS             complement(13833..14309)
                     /locus_tag="OY092_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1076490.1"
                     /translation="MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASY
                     NEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNE
                     GLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF"
     gene            complement(14478..15014)
                     /locus_tag="OY092_001547"
     CDS             complement(14478..15014)
                     /locus_tag="OY092_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HCX1076491.1"
                     /translation="MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDV
                     RHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRY
                     PNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDI
                     MKDNYALARATEWNSILQ"
     gene            complement(15512..16450)
                     /locus_tag="OY092_001548"
     CDS             complement(15512..16450)
                     /locus_tag="OY092_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCX1076492.1"
                     /translation="MKQFVNLGKSDVEVFPIALGTNAVGGHNLYPNLDEEQGKDVVRQ
                     AINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQP
                     EYLKQQVENSLKRLQTDYIDLYYIHFPDDNTPKDQAVAALQELKEQGKIKAIGVSNFT
                     LDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDE
                     NTKFSDHRTTRRDFKPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVII
                     PGAKLAEQVVENIKAADIVLSDDEIQYIDELFPIED"
BASE COUNT         5369 a         3112 c         2184 g         6037 t
ORIGIN      
        1 aaattatgac taacatatct ataataaata aagattagat atcaatatat tatcgggcaa
       61 atgtatcgag caagatgcat caaataggga ggttttaaac atggcaatta caaaaatcaa
      121 tgattgcttt gagttgttat caatggtcac ttatgctgac aaattaaaaa gtttaattaa
      181 aaaggaattt tcaattagct ttgaagaatt cgctgtattg acatacatca gcgaaaacaa
      241 agagaaagaa tactatctta aagatattat taatcattta aactacaaac aaccacaagt
      301 tgttaaagca gttaaaattt tatctcaaga agattacttc gataaaaaac gtaatgagca
      361 tgatgaaaga actgtattaa ttcttgttaa tgcacaacaa cgtaaaaaaa tcgaatcatt
      421 attgagtcga gtaaataaac gaatcactga agcaaacaac gaaattgaac tataattttg
      481 tttagcgcaa tttggtgaag tttgatagat gatacattct attaaacttc ctttttttat
      541 gctcttttta cctaattgtt aagaggtttt gcactaatgg cacttaatat aaggaagata
      601 gccgcataac gagcagtata tatcaaatac atttcaaaaa aagctgattt ctatcaaata
      661 atgaatagta atcagctttt tcacattgcc taaggacttt atgccctagg tttatatatc
      721 acatattatg atacgctttt taaaaaattt aaataataat tcataaatgc ttctggttct
      781 tcaatatgcg gtgcatgtcc tgaatgttcg aagatttttt tcgtaacatt taaaaaatgc
      841 gcttccaatt taaaatgatt tttatcttta atcaaaggat catgttcccc attaattaac
      901 aaagtaggta cacatgtacg tttttttaaa tacataggtt catctttatg caaaattaat
      961 gaacgaattg ccaccgcact atcatcctca gacttagtgc tatatattct ttgtttttga
     1021 taccatttca tcgtcttctc ttgatttcta aacaatttag aaaataaaag aatatacgct
     1081 tcagacttat taaaacccgc tatatcatct tgatattgta ttaacaattg agtaaagctg
     1141 tgtattaagt catctttctt cgatgcaatg gtagttaatg attttacacg ataagcatat
     1201 ttatctgtaa ataacttagc aactacccca cctaaatcat gtcctagaat atgtgcctca
     1261 tgaatattta acttctccat tagaattttt aaatcctcaa cgtgatcgtt taaatcgtat
     1321 gattcacttt tagaagactt gccatgacct cttaaatcgt aagtaagtac attatatgat
     1381 gatgctagtt gatgttgcaa atcttcaaat ccagctaaat taccatccaa tccatgaagt
     1441 aatattatag gatccccttt accttcaatt tgataagtta attggatttg aggattaatt
     1501 gtgactttat tcattgtgac acctccctca ataaactata tacccaacct tcattctata
     1561 tacgcttcca ttttataaac aattttttta aattatttat aaattaccaa aagttattcc
     1621 aacaataaaa aaactattca tctcaattaa tacaattaat caagtgaata gttttatcat
     1681 atttataatc ttgtacgtga agataatcta attgtgaaat atataactag aactactaat
     1741 aatatccata taattaatga aaaaatctgg gctgattgtg gattatgaat cattgcatcg
     1801 acggtttttt gacaaaataa taagccgatt cccgaaaact caagtcgctt ataaaatatg
     1861 ccggcaatta ctaaaataat accaatgaaa aagaaaaatt gatgtccaaa atttgtaatt
     1921 ggtataacgc cccaagtaat attaaatgct tgtaatataa ttaataacaa ggatatgata
     1981 gcgataattg tacccataat catttctatt ttattactac gcaagtaatt cttttgagac
     2041 actcttaggt atacaacaat agtcattgga aaaatcacta aacaataaaa tagactcatt
     2101 ccagtaatag cttgaaactg aacatactgt ttatcatata aataggatat gagaatgaaa
     2161 tttataataa agaaaataac tggattcatt tgtaaagcaa acaaattcct ttgaatcatt
     2221 aatatgattt gtgctggaga ttttctttta tattcaatat aatcttgatc tttcttttca
     2281 gaatttttta tatcagtaat tactttctct ttaatatcat caatcaaatg cggtgataaa
     2341 cctttatgat taaagtaatc ttctatattt tctagtaaaa ttttatcgtt aatacgcatt
     2401 ggtagtactc ctttaaaatg aaacatcttt atttattgta ttggtttaat atccccttcg
     2461 caaatcataa aaattaatat tcactgtatt atgccatgta ataaaataac cgacaagtat
     2521 tgcgatttaa cttgtcggtt aagcacgatt aatttaatta ttatttttcc aaatcaatac
     2581 gatataattt tatgttttta tcttttggtg ctgaggcaaa ttgataagtc gttttgcctt
     2641 tttcaatata tccaaaatta ccagcaactt tgctatattc cgtatgtgtt actgctttgc
     2701 caacataatt tttaacagct tgatatgttg gaccattagc atcattatac atcattgaaa
     2761 tatgagttac tttaccattg tttttcttac catcagtagt tactaataac ataccttttt
     2821 tagtatggaa ttcgtaataa tgttcagttc catcttcatt gtaagaatac atcggatttt
     2881 tgtacttagt taaaacatct ttaatagatt cgccaatttt cacattttct aatgactgat
     2941 cacccttaat taattgttta acagtatcaa tagagttgcc acttgctgct tcggcactag
     3001 tgttcactaa gcctactccc attacaacag aacatgcaat tatacttgcc gttagtagct
     3061 ttttcataag cactctctcc ttttatttat atcgtcttgt gctcacaacc attatacaac
     3121 aatcatttct aaaacaacag tcatattaca attatattac aaataataat tactactttt
     3181 aaatttcact tatcactaaa aattaaacat gcttttcatc gtgatgtttg ttgataaatg
     3241 aagctgtatc ttcgacgaat ctttcttgct cttcaacaaa tgggaatgca cttgattctt
     3301 gatatacttc aaagtccgca ttttggatta aatcagctac ttctttagct tctaatcttg
     3361 ttgttctttc accgaattct cctgcaataa tttttgtcgg tactacgaca tttctataag
     3421 tttgagaaat atcagcgttt ttgaatacct ctttaactgc ttgaatttct tctttagttg
     3481 atatttcatt tgtatctacg acatgtttga ggaatcgatt catttttctc ggacgataat
     3541 acttacgctt atttaaaaat ttatcttgtt tttcaggatc ccagtttcga ataatatggg
     3601 catattttct aaataaacgt tcttccggta attcaccttc aatagatgtt ggatttacca
     3661 acgtaagtga tgatgtaaat tcaggataac gtactgaaat atccgcacca atgattccac
     3721 ccatttcatg gcatacaaat gcaacttctt caatatataa atatttaagt aattcaacaa
     3781 tgtcatcaga aaaatctttt atttcaatgt gacgaggttt atcagaatag ccatgtccac
     3841 gtaaatcaat taacacaact tgaaatgatt ttgctaattc tgctgctaat ttattaaaca
     3901 cagaataatt atcaagtaca gtatgaatca atacgatagg atatccttca cctaatgtac
     3961 tgtaatgtat cgatgttcca tcttttctag taaatagatc cataattttc tcctttatta
     4021 tcatttttta ttggtaaaat ggttaataat tcttccactg ttgtaattgt aaaatcaact
     4081 tcttcttcga gtggttcaat ttcagcatct tcttgtttat accatacact aaccatgctc
     4141 atagctcgtg ctggagctac atcatttaac gcatcatcgc caacatacat aatttgctca
     4201 ggtaataccc ctagttgatc aatcatatct tcaaaaattt taggatgtgg tttacgaaaa
     4261 ccaactgttt ctgatgttga taaataatta ataacatgca tcaaaccaag tgaatgtaat
     4321 cgaaattgtt taatcttaga tttaccattt gcgataacac caatttgaaa gcctttttgc
     4381 gatagctttt ctagtgtata caaagtatcg taataaggaa atacataacg ataaaaatgc
     4441 atttcaaaat cattaaataa gtctttccaa gttaacctat ctacatggaa acgtttaatg
     4501 atttctttat ataaatcagg tttatcatta tcttcatcgt catctagctc aataaatgct
     4561 tttttaaaat ctgccagttg aacatgaatt aagtagtcat gaaatcgttc atattgctct
     4621 tcgataaatt tctctcgaga tttaactctg tccaacaacg taccttctaa atcaaataca
     4681 actgctttaa tttgattcaa atccatcgct tatgccctct ttatgtttat agttattttt
     4741 attttagcaa atgtcatgtg ctagtgtaac cgtttcgact gagatattag catgtaaaat
     4801 aacactggta taccaattaa tgcaataata atgcttgccg gtatttgtac tggtgacagt
     4861 atatggctac caataaaatc tgccataacc attatttgtc ctccaattac aatattcaaa
     4921 gccaattgtc ttcctaatga ttgtttccac tgccattttc taatgagttg tggtatcacc
     4981 ataccaatga atccaatgat gccaacatat gcgacattta tcgccgttat catagaagct
     5041 atacataacg cgatatatgt aatcaattga acatttaagc ctagtgactg actttttagt
     5101 tctcctaatt gcaataactt tagttgatta agaatgataa atataccaaa cagtgcaatg
     5161 ataaatgtga ttgctattat ggatacattt gagtattctg catcaccaaa accaccaaac
     5221 agataattgg caattgtatt taatttgcga ggttttaata aaatcaaaaa atatagaagt
     5281 gaattgaata acgcaccaat cattaaacca cttaatatta agattctaac tggatagcct
     5341 tggctcaata ccgacgtaat gactaataca gttattaatg ttatcaaact aaatgttatt
     5401 gaaaatacag gaatccataa cgttgttaaa cctaaaaata atgctaatcc tgaaccaaat
     5461 gtagcgccgc ttgccaatcc taatgtaaag ctatctgcca atgcattatt taaaactgtt
     5521 tgaaatataa ggcctgcaac agttaatatc atacctgtca acaatgcttc taataatctc
     5581 ggtaatctaa cattgattag aatagactgg ttaaatacat cattgatatc gcccaactgc
     5641 caaaatagat atatgctagt tgttataatc aatatgacta tccagctcaa taatacttta
     5701 ttaaatgtca tagcattctc ttttctttca tcgataatta cattcattat agcaatcaca
     5761 tactcgcgtt gctatcattc actaaatata ttttaaaaac cccttatctc aaacatgtat
     5821 ttttttacat gtagcaataa ggggcataat tagaatggtt tattttctat aaattgcatc
     5881 tcttaattct tttaatcctt catcaatacg tggacctggt cttgatactt catcaccatt
     5941 tacaacttca atacgtgtat tcttgacagc attaatttta ttgaatccac ctcttttttt
     6001 gatgatatcc atataatctg atcttgtctt agcttccgtc gaaattaata tatctgggtt
     6061 ctttttaata atactttcct tcgttacagg gttccaacca ttaatgtcac tatacacatt
     6121 ttgggcttct aatttttcta acatatcatt gaaaaatgta tgcttccctg ctgtatatat
     6181 ttcaggcttt gatgaaacct caataaatac ttttgatttt ttatgatgag caggaattga
     6241 atctatgact ttatcgatat tatctttagt ttcctcaaca agttgttcag cctgcttatc
     6301 atgatgcgtt aatttcccaa tttgcttaaa tgtgttgtaa gtttcatcaa ttgattgtgc
     6361 atctttaaca tatactactt tgatgccttg tttctctaat gatgacaata ctttattagc
     6421 agttgccttt tgcgactcat gcgcaagaat tagatctggc tttgccttta aaagttcctc
     6481 tttatttaga ttcaaagcat caaattgttt cttacccttt ttcacatctt ttggataatc
     6541 atcaaccgtt gaaacaccaa ctatgtattt acctaatcct aattcatata aaatttcagt
     6601 attactaggc attaacgaaa caattctatg gtacggcgat ttagacgagc cattatcatc
     6661 gctaccttgt ttatgattat ctttcatacc acagccactc aggacaagca taaaaatcaa
     6721 aataaaagca attaacgatt tcttcacatt atcacatctc ctttttaatc ccacttttcg
     6781 ctttagcgat tagagggatt tatgcagttg tgcggtagca tccaactgcg ttcctcttca
     6841 tctttagcga ttagaggctt ttatgcagtt gtgccttagc atccaactgc gttcctcttc
     6901 acctttagtg attagaggct tttatgcagt tgcgcggtag catccaactg cgttcctctt
     6961 cacctttagc gattagaggg atttatgcag ttgtgcccaa gcatccaact gtttttcact
     7021 ttatatgctt ctatttatta tataagtcca catactaaaa gaaaatagta aattattttt
     7081 tatatttcat ataaactcat ctatctaact tcacagcgtt tactttttaa agtaaggttc
     7141 taaaaaatca taattcttta tatctttgtc tctaaagtaa tgtttaccaa atacatctaa
     7201 cagagcatga aattcattag catcttgatt tgtaaaatga tttggtaatg tgactacttt
     7261 ttttaattga tcataacttt tagtgttttc atatcctaac ttatcatata tttttcttgt
     7321 atagctatct ggaataaata caatgcgtcc gaatatataa acaagtaaga catctgctgt
     7381 ttcacttcca atacctttca aagataataa ttcttttctt aattcacctt tatatcgctc
     7441 attaatctct tgataattga aatgatgtcg tgctaaccat gttaataatg ttttaatcgt
     7501 cagtgattta cttttataaa aaccacttga atgtatcaat gattgtaacg tttcaataga
     7561 tagttctaat atatgatttg gattaaaatg cgtgtgttct ttaatctgat tcaatgcaat
     7621 ttctgcattt cgccatctag tattttgaac taaaattgca cctaacatca tttcaatgtc
     7681 attatcagca ggccaccaat tttgcggtcc catatgccta tataacaatt tatacaattc
     7741 atcagttcct aacatttaca tcctcctttt agagggagtg ggacagaaat gatattatcg
     7801 taaaatttat ttcgtcgtcc caccccggca aggttgacta gaattgaaaa aagcttgtta
     7861 caagcgaatt ttcgttcagt caactactgc cattataact ttgtagagca tagaacatta
     7921 atttatgtct caggctctct tatgcagttg tgcgcaagca agccaactgc gttctcttaa
     7981 ccttattcac atactaagca ttccccaata tgtcacatac ctaattaaaa acactccaac
     8041 acaaagtatc tttcgagaaa ctctacgttg gagtgtatat aaatgttctt acattgattc
     8101 aggtgcgctt acaccgacca ttgccaatgc atttttcaat gtaattctaa ccgcttcaat
     8161 catagcaaca tgtgcttttg ttttttcaat atcatctgtt aacacttttt cagcattata
     8221 gaatttatgg aaatgagaag ctaaatcttg aatataatta gtaattctat gtgccgatct
     8281 atgctcagca gcactttcaa ttgtaggttc gaaatcagct acttttttca acaattcaat
     8341 cgctttttca ttagtaatcg ttgtaaaatc attcgcagca gtcacttcaa taccttgctc
     8401 ttttgcttgt tttaaaattg aacaaatacg tgcgtgagca tattgagcat aataaactgg
     8461 gttatcttga gattgctctt tcgctaattc catatcaaaa tcaaagtgac tatcaggact
     8521 acgcatagtt aagaaataac gtgcagcgtc aacgccaact tcgtccataa tttctcttaa
     8581 tgtaatggca ttaccagtac gtttactcat cttcacttct ttaccatttt ccattaaacg
     8641 aaccatttgc atgatttgaa tttctaaacg attactatct acaccaaacg tttcaagaga
     8701 tgctttcaaa cgattaatat aaccatgatg atcagcacca aataaatcga ttaaaatgtc
     8761 attaccacgt ttaactttat cgaagtggta cgcaatatct ggtaagaaat acgtatatgt
     8821 accgtcattt ttaattaata ctctgtcttt gtcgtcttta aaatcagttg tacgtaacca
     8881 tgtagcgcca tcagcttcat acgtataacc taattctttc atttttgcta aaacttcaag
     8941 aatttcgcct ttttcatata aagatgtttc actaaaccaa ttatcaaaat gcgtattgaa
     9001 ctctgctaaa tcatttttca atttagccat ttcgtattct acgcctaatt ttctaaattc
     9061 tttcaaacgt gcttcttcag aataatcttt aatttcaggg tgtttctctg ctaaatcttt
     9121 acctatttca ataatatctt ttccattata gccatcttct ggcattgaat aactattgtc
     9181 acctaaagct tcaaagaaac gtgtttcaat cgaacgcgct aagttagtaa tttgattacc
     9241 agcatcatta atataatatt cacgtgttac attatagcca gctgcagtta aaatattagc
     9301 taaagcatca ccaactgctg catttctagc atgaccaata tgtaaatctc ctgtagggtt
     9361 agctgaaaca tactcaagca atacattttg cccttttgat tcatttacat gtccaaattg
     9421 atcacctttt tcaattgctt caggaataat tgctgttaaa tactgattat ctaagtaaaa
     9481 attaatgaat cctggaccag caatgtcaat ttgttttaca tgtgcttttt cagtatctaa
     9541 gttatcaaca atcgcttgag caatttcacg aggattacgc tttgcaatct tagtcagtac
     9601 catcgcaata ttagtagcat aatctccatt ttttgtatct ttaggaactt caattttaat
     9661 atcaggaatc tcatctgcta atcctgcttt gttaatactt gctgcaattt cttctactaa
     9721 tgtttgtttc acttgatcaa taatattcat tcgcctatct ccttatagtt aatttcatat
     9781 tgataagaac ccattttttc attatcttga tataattcat aatgaatctt tagcttgcca
     9841 ccgtctccac ttacgaaatg taaaatgcgt aatgttttaa cttctagtgg aattcgtcca
     9901 gccgatatat cgtaaaaagt tgttgtcgtt tgtccttcaa caaaatgcaa attcatatta
     9961 atgtcgcctt tacgaatcaa cttaacgcta tcatcatcca cttttattgt aacattaact
    10021 gttgcatcct caatttgttc tacataccga ataaagttag attgcctttg ttgccaagtt
    10081 ccttcagtag taaattcaaa tttttctttt tcgttgtgct gtttcaacac ttgctttgtt
    10141 tgaatactta cttttttatc caatttacta ctcaccttaa tcttcgcata atagaaatat
    10201 tatagcataa aataaggtca tcttgttatg ccttcttaaa gctaaatagg ttcaattaat
    10261 taacaattcc atacttaatc aacgcttcat atatgtaagc cattttataa aatacaaaca
    10321 acacctcaaa accaaaaaac acgagatttt cactatcttt catgaaaacc tcgtgtttga
    10381 ttataatgat agtgttcaga gcactacctt cttcatctat atttaatcaa ttaatatttt
    10441 taaaatttaa taaccattct accagttata gtaccatttt ccatttcttc aaaaatatca
    10501 ttgatttctt ctaattttct taattgaact ttaggtgtta ctttattttc agcagcaaat
    10561 tcaaacgctt cacgtaagtc ttgtcttgta ccaacaagtg aacctactac ttcaataccg
    10621 tcaagcacta atcttgggat atctaagttc attttatcaa caggtaaacc aacagcaaca
    10681 actcttgcac cagcttttac aacatcaacc gcttggttaa atggcgtctt agcaactgaa
    10741 gttaccactg ttgcatctaa tcctttgtta tcagttaatt tcataacttc tgcaactgga
    10801 tcaacatctt tagaattaat aatagcatca gcacctaatt ctttcgcgaa tgctaattta
    10861 tcatcattga tgtcgaaggc aacaatttta gcccccataa cgtttttagc atattgtaaa
    10921 gctaggttac ctaaaccacc tataccaaaa acacctaacc attgtccagg ttttacatta
    10981 cttactttta cagctttata agttgtcaca cctgcgcatg taatagaaga cgctgctgct
    11041 ggatctaatt tttcaggtac tttcacagca tagtctgcag taacaataac ttgttcagcc
    11101 attgcaccat ctactgtata accagcattt ttcacactac ggcaaagtgt ttcacgacct
    11161 gttgtacaat attcacatct tccacagctt tcgaacatcc aagcgataga cacacggtct
    11221 ccaattttta atgattctac atcttccgca acttcgatga ctttaccaat accttcatga
    11281 cctaaagtaa cgcctgtaac atcaccaaaa tcagcattct taacatgtaa atcggtatga
    11341 caaacgccac aatattccgt ttgtaccaac gcttcaccag gttttaaagc tcttatcttt
    11401 ttgtcctcaa tacttacttt gtgatctttc gttacaactg ctgctctcat aataatgtcc
    11461 tccttatagt cactccagta tgtatgatat taattggcta ttactttcaa aaaagaaaac
    11521 gaataattat agatgtaatt tttatttgta atagacgcca gattaaaaca tactactgtg
    11581 accttgtttt tagttagata tcaaccgtta acttttaacg tttccctagt taatatgtta
    11641 aaagaaatga cataatcgat atgctaacgt gtaattttta cttcacatat atttatttaa
    11701 agataattta taatactctt atcttcactc ttattataat gtgaattaat tcacaaagta
    11761 tatagctatg atcaaaaaaa tgtgtcagtt attcaaattt tttattaact acagattaat
    11821 ttaatttcaa aaaaattaaa aaaactccca atcaatctaa gactttattt tcacctcaag
    11881 atttacgtcg tcattgagaa atgaatcata tctttataga ttaattggga aattttagtt
    11941 tctaatattt aattaaatgc ttgatgtaaa gcatcagaag aatgcttcca cataccttca
    12001 tcatggttca ttaaaaagtc ttttaaaata gctttattct cgtcaccaat ttgatcaatg
    12061 ataatatgat gtttcattga tttatccatc atattaacat gttcaggcat acttttataa
    12121 ccacgacgaa ttgctttatt cactaataaa tagcacgctg ttaaaccagc ataatatggt
    12181 ccttgttcat tacgttctgt tgttacccaa cacaaccaat attctttagc ttcatcgcct
    12241 tcaacagcag ctttatcagt aatccatttc acgccttttt caactttggc gcgagcatgc
    12301 atgcctccaa tatcaataaa tgcttctttg ttagcaacat cgataaaaac tggtgcaata
    12361 ttgtctaagc taattgaacc aatatttgta cctttatgac catctagagg gtcatttttt
    12421 atgatattaa aattaaagcc ttttttctca gacaatgata taacctccat atttaacgat
    12481 aacaatttta gcccttttta attaagctca ttaatcaaat tttcaatagc ttctctaatt
    12541 gtcttatctt taatctttgc aaccatttct ctaggataat ataatttata gtcttggcga
    12601 ttaatgcctg taatactatg aatgactaaa gattgattgc ttatttctct aatcgtacca
    12661 tcttgtctta ataaatgaat cggtttgcga tttgacccag gtcgatcata gtcatatggc
    12721 aaatccgaaa atgcttcact cacaaaataa taatctggat taataccacc tgcttcaaac
    12781 agttcttgca gttctgatat tgtaataatt gagccatcaa atggaatata tttaaataag
    12841 tctcgattaa taaatcgact tgctaaatca cttaaaatag catcatcttc ttttgtccat
    12901 ttttccaaat aatacgtaac taccgcttca tcgagttcaa catattgttc aatcgtaact
    12961 gtctcttcaa aaaatggaat aaaatcatgt ggatgcaact taaattcata gccttcatta
    13021 taaagctgtt ttgcgcgttt caaacaatta ttaagcagca cttctccacc acgactaact
    13081 gggtggaaat aaatttgcca atacatttga taacgactca taataaagtt ttcaactgca
    13141 tgcataccac tttctttaat tagtacttca tctttagaag gtcgcattaa tcttaaaata
    13201 cgttccatat caaaagcacc atatgataca cctgtgaaat acgcatcacg ttgtaaataa
    13261 tccattctat ccgcatcgat ttgtgaagaa atcatcgaaa tgaccaattt attatgatgc
    13321 gttttattaa ttacttccgc aacttctctt ggaaactcag gcgccacttt acgtaataca
    13381 gcattcacct cagtatctcc agtaataatc gcttgtgtgt atgcttcatg gtctgtatta
    13441 aatatttttt caaaactatg tgaaaatgga ccatgtccta aatcatgtaa taatgcagca
    13501 cataatgcca acggtctatc tttattgtcc catgcatcat gaccaataaa tgactcatca
    13561 attaatcgtc taactatttc atacacacct aaagaatgtc caaagcgact atgttctgct
    13621 gtgtgaaaag ataggtacag tgttcctagt tgtctaattc gacgtaacct ttggaattcc
    13681 ttagttttaa ttaaatccca tatcaattga tcttcaacat gaatatatcg atgtatcggg
    13741 tctttaaaaa ctttttcttc tactaatttt aaatctacat atgcgttagt cattattccc
    13801 ctccttttcg tttaatataa tatttaattt acttaaaatg ctttgtacat aagtgctaag
    13861 tctaactttt cgccatacat ttctggctca taagagcgta agattgtaaa accttgctct
    13921 ttatagtaag ctactgcttc ttcattttta ttatctactt ctaagtaaac accttcaaat
    13981 ttatcttcaa aacgtgataa tccttcattt aacaatgctg taccataacc tgtatgttgc
    14041 gattctggtt taacataatg agctgataaa tataattctt caccgtaaat aaagttagca
    14101 aagccaacga tgtcattacc ttcttcaacg actaagaata attgttcttg aagtcttttc
    14161 tttaaatgat gttcattata tgaagcttct aacaagtgat taactgttgt cgcagcgtat
    14221 atatttaagt atgtattaaa ccaagcttta gttgcgacat ctctaatttg aacaacatct
    14281 ttttcagttg cttgtcttac cttgaacatg actttctccc cttattaaca agttttaata
    14341 acggcattat accacaactt gctcaatact taataaacaa tgattgtcta ttcaatttat
    14401 atatttatat tttccgttaa aattaaaaat aaaaaataac gaagcaaaaa atcacttcgt
    14461 ttagtatgag gtatgtctta ttgcaatata ctattccact cagttgcacg tgctaaggca
    14521 tagttgtctt tcatgatgtc accaggcttt tcagcagttc caataatata accatttaaa
    14581 gtggcaccta aaaagtctaa actatatttc atttgcgtaa ttgctggctt cgcttttatt
    14641 tttggacaat ctccaccaac taaaataact ctaaaatcct tttcggccat ttgtgcctta
    14701 aaattaggat atcgtttatc ttgtaatgtt tctgaccaat gttcgataaa tgctttcaat
    14761 ggtgctgaaa tgctatacca atacactggt gatgcaaaaa taattgtatc actagccaat
    14821 attttatcta gaatcggcaa atagtcatcg tcatatgaag taatagtctc tgctgtatgt
    14881 ctcacgtcac gtatcggttt aaactgatgt tgtgtcacgt caatccattg atactctaaa
    14941 tcttgcaaag cgaattttgt taattgtgca gtattaccgt ttggtctact cccaccaaac
    15001 aaaacagtaa tcattttagc ctaacctcac ttttgattaa taaatatctg tgtttttcgt
    15061 tacctaatta tactatcata agctttgcct accgaatagt aaaacgctta caacttttat
    15121 ataaatttga cgaaatttcg tcatccttat ataacgtcgt ttgtgatggg agtgggacag
    15181 aaatgatatt ttcgcaaaat ttatttcgtc gtccccccca acttgcacat tattgtaagc
    15241 tgtcttttcg ccagcttcta tgttggggcc cgccaactta cattgcctgt agaatttctt
    15301 tttgaaattc tctgtgttgg ggcccacacc ccaacttgca ttgcctgtag aatttctttt
    15361 cgaaattctc tgtgttgggg cccctgacta ggattgaaaa aagcttgtta caagcgcatt
    15421 ttcgttcagt caactactgc caatataact tcgtagagca tagaacattg atttatgtcc
    15481 cagcctgata tcaccattaa atacaattca tttagtcttc aatcggaaac agttcatcga
    15541 tatattgaat ctcatcatct gataaaacga tatctgcagc tttaatattt tcaacgactt
    15601 gttctgcaag ttttgcacca ggaataatca catcgatagc tggtctcgtt aaataaaatg
    15661 ctaatacaat gttcgcaatt gaagtttgat gtgctgcagc tatgctttcc aaagctttta
    15721 cgcgacgcac attttcttca aatacacctg gtttaaaatc acgacgtgta gtacgatggt
    15781 cactaaattt agtgttctca tcatattttc cagctaaaat accggatgct aatgggaaat
    15841 atggaataaa tgtgatttgg tgatcaacac aatattgtaa tactgcctca ttttcgcgat
    15901 gcaataaatt atattctaac tgtacaacat caacgtaacc atctttattt gcttctttaa
    15961 gttgatctaa tgtgaaattt gatacaccaa tggctttaat cttcccttgt tccttaagct
    16021 cttgtaatgc tgcaactgct tgatctttcg gagtgttgtc atccggaaaa tgaatataat
    16081 ataaatcgat ataatcagtt tgtagacgtt tcaaactatt ctcaacttgt tgttttaaat
    16141 attcaggttg attgttctga tgtacttctt gattttcatc aaattcatga gacccttttg
    16201 tagcaatttt aatttgctct cgcggatatt ctttaacaac ttctccaacc aattcttctg
    16261 atcgttctgg cccataaata tatgccgtat ctaataaatt aataccatga ttaatggctt
    16321 gacgaacaac atcttttcct tgttcttcat ctaagttcgg atataaatta tgcccaccta
    16381 ctgcgttcgt cccaagtgcg attggaaaca cttcaacatc agatttacct aagtttacaa
    16441 attgcttcat tagacccagc tccttatctt tataactttt ccactatcac actaccatga
    16501 tttaatacaa cttccaaatg ttagaattag agcttgaatt taagcggtgt aataggaaaa
    16561 cgttatataa aactcagtta aaataagtat tgcttaaatt gatatgcata tagcgcgatt
    16621 gctcgttgac ctttaaatta catgtacttt tgaatcagaa attgaaaaac atttaagaac
    16681 gacaacatta aagccattac aa
//
LOCUS       DAKPJH010000056        16620 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.056, whole genome shotgun sequence.
ACCESSION   DAKPJH010000056 DAKPJH010000000
VERSION     DAKPJH010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16620
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.056"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(10..324)
                     /locus_tag="OY092_001549"
     CDS             complement(10..324)
                     /locus_tag="OY092_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCX1076493.1"
                     /translation="MTKHNNIYKHGRKSYQYDWFYHSKAWKKLREIALDRDNYLCQMC
                     LREDIITDAKIVHHIIYVDEDFNKALDLDNLMSVCYSCHNKIHANDNDKSNLKKIRVL
                     KI"
     gene            complement(481..918)
                     /locus_tag="OY092_001550"
     CDS             complement(481..918)
                     /locus_tag="OY092_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1076494.1"
                     /translation="MGKASYDIKPGTFKYIESEIYNLNENKKEINRLRMEILNPTKEL
                     DTNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRL
                     KYWNKDKKLKIEQIGDACHMHRNTVTTIRKNFVKAIAYHAGIK"
     gene            complement(931..2298)
                     /locus_tag="OY092_001551"
     CDS             complement(931..2298)
                     /locus_tag="OY092_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCX1076495.1"
                     /translation="MEHLAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTA
                     FSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEA
                     DIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGL
                     TGTPSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEE
                     KIYKQIEDICLSMKAKDYLDMPDRVDTKQTVVLSEKERKVYEELEKNYILESEEEGTV
                     VAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQGQSILLFYNFKH
                     DKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLT
                     WSLELYQQANARLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKAR
                     IAKHK"
     gene            complement(2279..2569)
                     /locus_tag="OY092_001552"
     CDS             complement(2279..2569)
                     /locus_tag="OY092_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HCX1076496.1"
                     /translation="MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKT
                     YFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTFGD"
     gene            2703..2801
                     /locus_tag="OY092_001553"
     CDS             2703..2801
                     /locus_tag="OY092_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076497.1"
                     /translation="MNLMQHWKQTGLNLTARRERGVVSFVASMLHH"
     gene            complement(2910..5357)
                     /locus_tag="OY092_001554"
     CDS             complement(2910..5357)
                     /locus_tag="OY092_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000884880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence-associated E family protein"
                     /protein_id="HCX1076498.1"
                     /translation="MLDKVTQIETIKYDRDVSYSYAASRLSTHWTNHNMAWSDFMQKL
                     AQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYA
                     AQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVG
                     MDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDKILNEYVDWTDTLEWPTSS
                     KEESKTKRLADKQGDPEEKPGIVGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGS
                     TAGGLVLYENNKFAYSHHNTDPVSGMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSY
                     KAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNI
                     EIILRNDPNLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDI
                     HHSGKTKDAIISVAMQNAYHPVRDYLNKISWDGHKRLEKLFIKYLGVEDTEVNRTTTK
                     KALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTGKEAYEA
                     LQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKV
                     DFLRDETGGRRFWPMTVNPERVEVNWSKLTKEEIDQIWAEAKYYYEQGEELFLNPELE
                     EEMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIFERRRFYQGDVDMLPTGNVDY
                     VERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKD
                     YGVQIAYVRDESLEDLI"
     gene            complement(5409..5609)
                     /locus_tag="OY092_001555"
     CDS             complement(5409..5609)
                     /locus_tag="OY092_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1514 family protein"
                     /protein_id="HCX1076499.1"
                     /translation="MWIVISIVLSIFLLILLSSISHKMKTIEALEYMNAYLFKQLVKN
                     NGVEGLEDYENEVERIRKRFKS"
     gene            complement(5677..5829)
                     /locus_tag="OY092_001556"
     CDS             complement(5677..5829)
                     /locus_tag="OY092_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1076500.1"
                     /translation="MVKQILRLLFLLAMYELGKYVTEQVYIMMTANNDVEAASDFEKI
                     RAEVSW"
     gene            complement(5829..6215)
                     /locus_tag="OY092_001557"
     CDS             complement(5829..6215)
                     /locus_tag="OY092_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076501.1"
                     /translation="MMIKKLKNMDWFDIFIAGILRLFGVIALMLVVISPIYTVASYQN
                     KEVHQGTITDKYNKRQDKEDKFYIVLDNKQVIENSDLLFKKKFDSADIQARLKVGDKV
                     KVKTIGYRIHFLNLYPVLYEVKKVGK"
     gene            complement(6205..6441)
                     /locus_tag="OY092_001558"
     CDS             complement(6205..6441)
                     /locus_tag="OY092_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076502.1"
                     /translation="MFNTPKMKLPEKHTEVFKTYKNGTPEEKAEIEGCFIKTVKDEDS
                     EFYSPMLASLNEQQLKSMLRQVLFLIDTGDDNDD"
     gene            complement(6466..6702)
                     /locus_tag="OY092_001559"
     CDS             complement(6466..6702)
                     /locus_tag="OY092_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1381 domain-containing protein"
                     /protein_id="HCX1076503.1"
                     /translation="MTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKEKY
                     ESQNTPIVYYTNNSKVTLFERPSEEVLGSLFEKK"
     gene            complement(6739..7266)
                     /locus_tag="OY092_001560"
     CDS             complement(6739..7266)
                     /locus_tag="OY092_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP pyrophosphatase"
                     /protein_id="HCX1076504.1"
                     /translation="MTNTLQVKLLSENARMPERNHKTDAGYDIFSAETVVLEPQEKAV
                     IKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDAQVYLTT
                     NEQCFDIQGEMENSFVNNAKKKPFTINDYYEIYKGDKLAQLVIVPIWTPELKQVEEFE
                     SVSERGAKGFGSSGV"
     gene            complement(7259..7507)
                     /locus_tag="OY092_001561"
     CDS             complement(7259..7507)
                     /locus_tag="OY092_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1024 family protein"
                     /protein_id="HCX1076505.1"
                     /translation="MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILE
                     GLPNAMQDALKEDIYLDEAVGIMVSQVVYKYEEEQEND"
     gene            complement(7522..7764)
                     /locus_tag="OY092_001562"
     CDS             complement(7522..7764)
                     /locus_tag="OY092_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076506.1"
                     /translation="MTDSARKERLNQFFGSKRYLYQDNERVAHIHVVNDIYYFHGHIV
                     PGWQGVKKTFDTAEELEIYIKQHGLEYEEQKQLTLF"
     gene            complement(7779..7979)
                     /locus_tag="OY092_001563"
     CDS             complement(7779..7979)
                     /locus_tag="OY092_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076507.1"
                     /translation="MATQKQVDYVMSLQEQLELEDCEKYTDEQVKAMSHKEVSNVIEN
                     YKTSIRNEELYYECMSFGLPNC"
     gene            complement(7982..8239)
                     /locus_tag="OY092_001564"
     CDS             complement(7982..8239)
                     /locus_tag="OY092_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HCX1076508.1"
                     /translation="MSIISNRKVDMNETQDNVKQPAHYTYGDIEIIDFIEQVTAQYPP
                     QLAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVDRVFDLWEG"
     gene            complement(8239..8640)
                     /locus_tag="OY092_001565"
     CDS             complement(8239..8640)
                     /locus_tag="OY092_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PVL family protein"
                     /protein_id="HCX1076509.1"
                     /translation="MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDE
                     LLCGRKDSKSKDEVEYMKSQIKDEEKGREKIRKKAILNRYQRNVRAEYEEERKRRLRP
                     WLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA"
     gene            complement(8640..8825)
                     /locus_tag="OY092_001566"
     CDS             complement(8640..8825)
                     /locus_tag="OY092_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3113 family protein"
                     /protein_id="HCX1076510.1"
                     /translation="MQHQAYINASVDIRIPTEVESVNYNQIDKEKENLADYLFNNPGE
                     LLKYNVINIKVLDLEVE"
     gene            complement(8838..10790)
                     /locus_tag="OY092_001567"
     CDS             complement(8838..10790)
                     /locus_tag="OY092_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HCX1076511.1"
                     /translation="MNIDIETYSSNDISKCGVYKYTEAEDFEILIIAYSIDGGAISAI
                     DMTKVDTEPFHADYETFKIALFDPAVKKYAFNANFERTCLAKYFNKQMPPEEWICTMV
                     NSMRIGLPASLDKVGEVLRLQNQKDKAGKNLIRYFSIPCKPTKVNGGRTRNLPEHDLE
                     KWQQFIDYCIRDVEVEMTIANKIKDFPVTVIEQAYWVFDQHINDRGIKLSKSLMLGAN
                     VLDKQSKEELLKQAKHITGLENPNSPTQLLAWLKDEQGLDIPNLQKKTVQDYLKVATG
                     KAKKMLEIRLQMSKTSVKKYNKMHDMMCSDERVRGLFQFYGAGTGRWAGRGVQLQNLT
                     KHYISDTELEIARDLIKEQRFDDLDLLLNVHPQDLLSQLVRTTFTAEEGNELAVSDFS
                     AIEARVIAWYAKEQWRLDVFNTHGKIYEASASQMFNVPVESITKGDPLRQKGKVSELA
                     LGYQGGAGALKAMGALEMGIEENELQGLVDSWRNANPNIVNFWKACQEAAINTVKSRK
                     THHTHGLRFYMKKGFLMIELPSGRALAYPKALVGENSWGSQVVEFMGLDLNRKWSKLK
                     TYGGKLVENIVQATARDLLAISIARLEASGFKIVGHVHDEVIVEIPRGSNGLKEIETI
                     MNKPVDWAKGLNLNSDGFTSPFYMKD"
     gene            complement(10859..11413)
                     /locus_tag="OY092_001568"
     CDS             complement(10859..11413)
                     /locus_tag="OY092_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000647288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HCX1076512.1"
                     /translation="MKAQLKNETKVITGKVRASYAHIFEPHSMDESTPKKYSVSLIIP
                     KEDTQMVEIIEKAIENAKEAFKGKWNGKIPNNLKTPLRDGDIDREDDPNYENAYFINA
                     TSQNAPGVVSPAMVRLNEPGSVVSGDYIRAVINFYGYNVNGNKGIAAGLNNIQLVEKG
                     EPLGGASAAEDDFDELDTDDEDFL"
     gene            complement(11439..12605)
                     /locus_tag="OY092_001569"
     CDS             complement(11439..12605)
                     /locus_tag="OY092_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HCX1076513.1"
                     /translation="MKLDHSNRAHAKLSASGAKQWLNCPPSIKASEGIADKSSVFAEE
                     GTFAHELSELYFSLKYEGLTQFEFNKAFQNYKRNQYYSEELREYVEEYVANVEEKYNE
                     ALSRDDDVIALFETKLDLGKYVPESFGTGDVIIFSGGVLEIIDLKYGKGIEVSAIDNP
                     QLRLYGLGAYELLSLMYDIHTVRMTIIQPRIDNFSTEELPISRLLQWGTDFVKPLARL
                     AYNGEGEFKAGSHCRFCKIKHSCRTRAEYMQNVPQKPPHLLSDEEIAELLYKLPDIKK
                     WADEVEKYALDQAKENDKNYPGWKLVEGRSRRMITDTNATLEKLVEAGYKPEDITETK
                     LLSITNLEKLIGKKAFSKIAEGFIEKPQGKLTLATESDKRPAIKQSAEDDFDKL"
     gene            complement(12602..12964)
                     /locus_tag="OY092_001570"
     CDS             complement(12602..12964)
                     /locus_tag="OY092_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076514.1"
                     /translation="MAILEGIFEELKLLNKNLRVLNTELSTVDSSIVQEKVKEAPMPK
                     DETAQLESVEEVKETSADLTKDYVLSVGKEFLKKADTSDKKEFRNKLNELGADKLSTI
                     KEEHYEKIVDFMNARINA"
     gene            complement(12979..13302)
                     /locus_tag="OY092_001571"
     CDS             complement(12979..13302)
                     /locus_tag="OY092_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmB family transcriptional regulator"
                     /protein_id="HCX1076515.1"
                     /translation="MTLQQKILSHFATYDNFNSDDVVEVFGISKTHAKSTLSRLKKKG
                     KIELESWGIWRVVEPQLHLTVVERKKEILEEQFELLARLNEQSDDPREIEERIKLMIR
                     LANQF"
     gene            complement(13381..13542)
                     /locus_tag="OY092_001572"
     CDS             complement(13381..13542)
                     /locus_tag="OY092_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1270 domain-containing protein"
                     /protein_id="HCX1076516.1"
                     /translation="MSDTYKSYLLAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFI
                     FYKEYFYEE"
     gene            complement(13555..13818)
                     /locus_tag="OY092_001573"
     CDS             complement(13555..13818)
                     /locus_tag="OY092_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076517.1"
                     /translation="MPKIIIPPTPENTYRGEEKFVKKLYATPTQIHQLFGVCRSTVYN
                     WLKYYREDNLGVENLYIDYSATGTLINISKLEEYLIRKHKKWY"
     gene            complement(13843..14058)
                     /locus_tag="OY092_001574"
     CDS             complement(13843..14058)
                     /locus_tag="OY092_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076518.1"
                     /translation="MNTRSEGLRIGVPQVSSKADASSSYLTEKERNLGAEILELIKKS
                     DYSYLEINKVFYALDRELQYRANNNKL"
     gene            14113..14478
                     /locus_tag="OY092_001575"
     CDS             14113..14478
                     /locus_tag="OY092_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076519.1"
                     /translation="MPLISDEFDTLTKDQQYILSVLYKDYLECVKLGSVKLTCNNFGS
                     AKDIHTKYFQKLHFEDVKYDLNKLKNSGFLNGVYASNTIYHVTISDKTVVYFENEFKN
                     NLKSIIDSISKIASIIPGL"
     gene            complement(14447..14692)
                     /locus_tag="OY092_001576"
     CDS             complement(14447..14692)
                     /locus_tag="OY092_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HCX1076520.1"
                     /translation="MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISN
                     SDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQF"
     gene            14759..15139
                     /locus_tag="OY092_001577"
     CDS             14759..15139
                     /locus_tag="OY092_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001601275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2513 domain-containing protein"
                     /protein_id="HCX1076521.1"
                     /translation="MKLNHDCVRLLLLEIESNKKIGEPLTRHNFNDNIIFDKYDFETV
                     MYSLLKLEEAKFICCDLKFIEGRVVSWIIDDITWSGHEFLDNIRDNKTWNEVKRVVNK
                     TSSMSLNLMGKLAFQYLSQKFNLT"
     gene            complement(15126..15323)
                     /locus_tag="OY092_001578"
     CDS             complement(15126..15323)
                     /locus_tag="OY092_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076522.1"
                     /translation="MQAQNKKVIYYYYDEEGNRRPLDIQINDGYELMVRSHFINNTIE
                     EIPYVNNNLYALVDGYEFKLD"
     gene            15393..15605
                     /locus_tag="OY092_001579"
     CDS             15393..15605
                     /locus_tag="OY092_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000362644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HCX1076523.1"
                     /translation="MDLEKIAHDITISLLPRALDRHKIHNEWQEVGDDVIAFAKDSVA
                     RDYFSIYSSVLLGLQEEEKSRKDLGL"
     gene            complement(15646..15795)
                     /locus_tag="OY092_001580"
     CDS             complement(15646..15795)
                     /locus_tag="OY092_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000771849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076524.1"
                     /translation="MKLLRRLFNKKHENLIDVWHGNQWLKVKESKLKKYKVVSDREGK
                     KYLIK"
     gene            complement(15810..16253)
                     /locus_tag="OY092_001581"
     CDS             complement(15810..16253)
                     /locus_tag="OY092_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076525.1"
                     /translation="MEQITLTKEELKEIIAKEVRNAIKGEKPISSGAIFSKVRINNDD
                     LEEINKKLNFAKDLSLGRLRKLNHPIPLKKYQHGFESIHQKAYVQDVHDHIRKLTLSI
                     FGVTLNSDLSESEYNLAAKIYRDIKNYYLYIYEKRVSELTIDDFE"
     gene            complement(16301..16513)
                     /locus_tag="OY092_001582"
     CDS             complement(16301..16513)
                     /locus_tag="OY092_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1076526.1"
                     /translation="MTTSVADKPYLKIKSLIALKGTNQKEVAKAIGMSRSLLSIKINR
                     INGRDFTTSEAKKLADHLNVKVDDFF"
BASE COUNT         4670 a         3291 c         2301 g         6358 t
ORIGIN      
        1 tttttttatt taaattttta gaactctaat tttcttaaga ttacttttgt cattatcatt
       61 tgcatgaatt ttgttatgac agctataaca aactgacatt agattatcta agtctaaagc
      121 tttgttaaaa tcttcatcaa cataaataat gtgatgcaca atctttgcat ctgttataat
      181 atcttcgcgt aaacacattt gacaaagata attatctcta tctaatgcta tctctcttaa
      241 cttcttccat gcttttgaat gatagaacca atcgtattga tatgacttac gaccatgctt
      301 ataaatgtta ttatgcttgg tcatctctta cacctctttg attgcataac aaaagacaca
      361 ccgcttagcg atgcgcctca tgtatttatg tcgtataact ttcagataac tttatacatc
      421 tttccgatac tatcatatta ctacagattt gtaggccttt tgcacaatct ttgcacaatg
      481 ttatttgata cctgcatgat acgctatcgc tttaacaaag ttctttcgta ttgtagtaac
      541 tgtattgcga tgcatgtgac aagcatcccc tatttgttct atctttagct tcttatcttt
      601 attccaatac tttaacctta ttactttctt atgatcttca ggtaacttta agtactcact
      661 ttcaactgct tcaaccatct cttctaagtt acgtaacatc ttattagtca ataaccttgt
      721 cgccattaac tcagttgttc taactggctc tcctttttgt aacggtccat acacaatgtt
      781 ggtgtctagt tctttcgttg ggttaagtat ctccattctc aatctattta tctctttctt
      841 gttctcattt aaattatata tttctgattc aatatattta aatgttcctg gcttaatatc
      901 atatgatgcc tttcccatct tatacctcca ttacttatgc ttagctattc ttgctttaat
      961 agctttcatc aattcttctt gcgttagttc tttattttgt aaagctttat atactctttg
     1021 atctattgtg ttatcggtca tgatgtgatg aataatagtc gtatgatttt gtccttgtct
     1081 atataatcta gcatttgctt gttggtataa ttccaaggac catgtaagtc caaaccaaac
     1141 aataatgtgc ccaccttgtt gtaagtttaa tccatgtcct gcacttgctg gatgtgctat
     1201 aagcaactta atgtctccac tgttccaacg ttctttatag tttgaatcct ctaatgtggt
     1261 tgcttcctta aacctttgaa gtattctttc tttatcgtgt ttgaagttat aaaacaatag
     1321 tattgattgg ccttgagact cctctataat ttcctctaac ttatctaact tcttatcatg
     1381 tataagtctt acatcttcct catctgtata aactgcgccg ttagatagtt gaagtagttt
     1441 ctgacttaat gatgccccat tttgagctac aactgttcct tcttcttccg attctaaaat
     1501 atagtttttt tctaattctt catatacttt tctttctttt tctgataaga ctactgtttg
     1561 tttagtatca actctgtcag gcatatccag ataatctttc gctttcatgc ttaaacatat
     1621 atcttctatt tgtttatata tcttttcttc agatccgtct cttagctccc acttaaaaat
     1681 atgttcgcta acttgatgag ttggtttaaa gtacctttct cgataacgac tgaatgaaga
     1741 ctcaagtctt tcacctctgt ctatcaaata aacttgagcc cataaatcct gtaaactatt
     1801 tggactaggt gttcctgtta atcctataaa tctattaatg agtggtaatt tctttttaat
     1861 agatttaaac ctttgactct taggactttt aaatgtagac agttcatcaa tcacaaccat
     1921 gtcaaatggc cattcttttt tatattgatc acataaccat ttagtatttt ctttattggt
     1981 tacatagata tcagcctctg tgtttaatgc atcatttctt tctttaggtg ttcctaaaac
     2041 taaagacact ttcagatgat ttaaatggtt ccacttatca acttcatcaa cccatgtatc
     2101 tttagcaact tgtttaggtg ctataactaa cattttttta gtgtctaaca actgcaattc
     2161 actaaatgct gtaagtgttg atactgtttt ccctagaccc atatctaaaa acagaccgta
     2221 tttctcatta tctatcactt tatctattgc atacttttga tagctatgtg gtttgaagtc
     2281 aatcgccaaa tgttccacct accattctga taaaagtatt tacttgttct ttattccata
     2341 acacatatac tttatgatct ctattttcaa attgtctatg cacatatttt tgtaaaggat
     2401 gcaactttcc tttttcttgc ttcatttcta caaaatatgt ttttccttct ggcataataa
     2461 taattctatc tggcacacct cttgttccag gtgcaaccca ttttaaacat aaaccgttta
     2521 gctttgttat ctctttcact aaatattttt ctaatgtcga ttctttcata tattcacctt
     2581 gtatacaaaa tttatatttg tgttccgatg ttgcatcaat tcttgccaaa cttttaaaaa
     2641 tagctgttag aaggttaccc ctatacctct ttactcccta acactacttt ttaaacttta
     2701 tagtgaattt gatgcaacat tggaaacaaa cagggttgaa ccttacagcg agaagggaaa
     2761 gaggtgttgt atcatttgtt gcatcaatgt tgcatcacta aaaatgatgc aacacctacg
     2821 attacttttt acactcacgt gttgcatcac tcaaaaaatg atgcaacatc tgatacaaca
     2881 ctctaaaatg tatatttatt caatatttat tatattaaat cttctaaact ttcatctctt
     2941 acataagcta tctgtacacc ataatctttt ccaaatcgaa ttttcccact tttattacca
     3001 tcatatacag accaattgtc taattgtctt aagatgtttg aaatctttct aatttccata
     3061 gatcctctac tatctccctt atctttacca aaacattcaa caaacacttc aagcgcacag
     3121 accttatttc tttcaacgta atctacattt cctgttggta acatatcaac atcaccttga
     3181 taaaatcgtc ttcgttcaaa gatagttaag tcatcccaat tgctaggaat tggtgtgtta
     3241 agatattcat caataatgcc tgtatatgga gattcctcag tatgtttgct ttgtattgaa
     3301 cgcatttctt cttctagttc agggttgagg aataactctt ctccttgttc ataataatat
     3361 ttagcttctg cccaaatttg gtcgatctct tctttggtta gtttagacca gttcacttca
     3421 actctctctg gatttacagt cattggccaa aaacgtcttc caccagtttc atctcttaag
     3481 aaatcaactt tattagttgt accaatgaaa atacattgcc ttggaaaatc ttcaatataa
     3541 tgtccataag caacacgaaa ccggtcaact tgtttagata tgaaatgctt aatagcttca
     3601 acttcagctt ttcttgtagc tgcaagttct gccatttcca ttagccaaac gccttgtaag
     3661 gcctcatagg cttctttacc tgtaacagaa actaaactgt cagaaaacca tgcaccacct
     3721 aattttttta gcaaagcaga tttacctaca ccttgaggac cataaagtgt aagcatatag
     3781 tcaaatttac atccaggctc cattactcga gcaattccag cagtcaatgc ttttttggta
     3841 gttgttctat tcacttcagt atcttcaaca cctaagtatt tgataaataa cttttcaaga
     3901 cgtttatgtc catcccacga tattttattt agataatccc ttactggatg ataagcattt
     3961 tgcattgcta cgcttataat ggcatctttt gttttacctg aatggtgtat gtcataaatc
     4021 ttttcgatat aacttcttaa actgctatca tcaccgtctt gccattgacg tgtcttaaaa
     4081 ttagtattcc atggcacttt ccctaagcat tcaatttgtt ttgtaaattc attaaatgct
     4141 atttttcctt ttaaatttgg atcattacgc aatataattt ctatatttgg gatactagct
     4201 ttgaaagtac ctttcgaagt aatttctaac gtctcagacc atgcatcatc gctatttact
     4261 atttcatcga aatcctgcat tgcatcagac attttgtcgt taattaattg ctttttaaca
     4321 acttcatcat tttgcgctct ttgctgcatt gctttataac taggtagtcg attaaccgga
     4381 gtatctgttt tagcgtcttc atcttgagca ccatataagt gtatgcgtac taaatcaaaa
     4441 ctgttcacaa gcataccgct aacgggatcc gtattatgat gagaataggc aaacttgtta
     4501 ttttcgtata acaccaatcc acctgcagtt gaaccttcat gataggtata acggttagta
     4561 gaatgttttt cgtataagtc aggaataaaa gttgatatag cttcttctat cgtataggct
     4621 ctacaaaatg cgccaacaat tcccggcttt tcttctgggt caccttgctt atctgctaat
     4681 cttttagtct tactctcttc ctttgaagac gttggccatt ctaatgtgtc agtccaatca
     4741 acatattcat ttaatatttt atctggatct aacaaaggta aatcttcata ggtaaagaaa
     4801 aattctgcat cattgctagt tgaaggccaa tacattaacc tatgtggttg ataagttgta
     4861 tcatcgaagt aatccatgcc aacgatatct gccactttac gtccaatagc ttcatactca
     4921 tctgcattta cattccgttt taaaggaatc actaaacgca gtcttggact tatctctcta
     4981 tgcttatgtg ttgaatataa acagtatgca aaatcataaa acatagataa tatgtcggtc
     5041 atatcttgag cagcataatc gatatcaagt gttagcattg aacgattcat gacttgacca
     5101 gcacgccgtt tcccttcttt taaatatccg ccgacaaatc caccaacatc ttttatatcg
     5161 gcttgttcag acttagacat tttattgtac tcagttaaat cttctttagt tctaactgtt
     5221 tgtgctagct tctgcataaa gtcagaccaa gccatattgt gattagtcca atgtgtagat
     5281 aaacgactag cagcataaga atatgaaaca tcacgatcat atttaattgt ttctatttga
     5341 gtgactttgt ctaacatgtt cggctccttt cattatttta gatagaacag agaagccaac
     5401 gcctctcttt agcttttaaa tctttttcta attcgttcaa cttcattttc ataatcttct
     5461 aaaccttcaa caccattatt ttttactaac tgcttgaaaa gataagcatt catatactcc
     5521 aatgcttcta tggttttcat cttatgagaa atgctactta acaagatcaa taaaaatata
     5581 gataaaacaa ttgaaatgac aatccacata tttacaacac ctccagtgct attgctaaac
     5641 acattaatat aattaattca aaaatgataa tagctattac catgaaactt cagctctgat
     5701 tttttcaaag tcacttgctg cctctacatc attattagcc gtcatcataa tatatacttg
     5761 ttcagttaca tacttaccta gctcatacat tgctaataag aataatagtc ttaatatttg
     5821 tttaaccatc atttacctac cttcttcact tcgtataaga ctggatataa atttaaaaag
     5881 tgtattctat aaccaatcgt tttaactttt actttatcgc ctacttttaa cctagcttgt
     5941 atgtctgcgc tatcaaattt ctttttgaat aataagtcag agttttcaat gacttgcttg
     6001 ttgtctaata caatatagaa cttgtcttct ttatcttgtc tcttgttata tttatctgta
     6061 attgtccctt gatgtacttc tttgttttgg taactagcca ctgtatagat aggcgatatg
     6121 acaacaagca tcagtgcgat tacgccgaat aatcgcagta ttccagcaat aaagatatcg
     6181 aaccaatcca tatttttaag ttttttaatc atcattgtca tctcctgtat caatcaaaaa
     6241 aagtacctgt ctcaacatac tctttaactg ttgttcattt agactggcta acatagggct
     6301 gtaaaattca ctatcttcat ctttaacagt tttaataaaa cagccttcaa tctcagcttt
     6361 ttcttctggc gttccatttt tatacgtctt aaatacctcg gtgtgctttt ctggtaattt
     6421 cattttaggt gtattaaaca ttattatctc ccctctttaa tgattttatt tcttttcgaa
     6481 caaagaacct aatacttctt cactaggtct ttcgaataag gtcactttag aattattagt
     6541 gtagtaaaca ataggtgtat tttgtgactc atatttctct ttcgcttctt ctttactctc
     6601 tgcctcaaca actgtaaacc tttgattact cttagcttta gttatgtgtg tatgtttacg
     6661 tcctgttgaa tctttgaatg ttgtgactaa gtattgcgtc acttccccaa aacctccttg
     6721 actcgatcta agatgtcttt acactccgct acttccgaag ccttttgctc cacgttctga
     6781 aacactctcg aattcctcca cttgctttag ttcaggtgtc catataggca cgataaccaa
     6841 ttgagctagt ttgtcgcctt tatatatttc gtaataatca tttatagtaa aaggtttttt
     6901 cttagcatta tttacaaaag aattttccat ttctccttgt atatcaaaac actgttcgtt
     6961 agttgttaaa tatacttgtg catcattctt gatattaatc cccaaattac catgatatcc
     7021 cgcgtctatc ttgcctgttt caatcactaa atgcgtttta ctacttacac cactacggct
     7081 agttaatagt ccgacatagc cctctggtat gcttacagct acatctgttt tgatcactgc
     7141 cttttcttgt ggctcaagta cgacagtttc agctgagaat atgtcataac ctgcatccgt
     7201 cttatgattt cgttcgggca ttctagcatt ttctgataat agttttactt gtaatgtgtt
     7261 agtcattttc ctgttcctcc tcatatttat agaccacttg acttaccata atacctactg
     7321 cttcatcaag ataaatatct tctttgagtg catcttgcat agcattaggt aaaccctcaa
     7381 gtatttcatc aaacgcttgc gctttcttat acacgtcctc aatctctttt agcaatccct
     7441 ctgtgtcatt gccgttatac gcactagcac ttataacgga ttgttctatt tgttcacggt
     7501 tattcatcat ttccatctcc tctaaaataa agttagttgc ttctgttcct cgtattccaa
     7561 accatgttgc tttatatata tttcgagctc ttcagcagta tcaaatgtct ttttcacacc
     7621 ttgccaacct ggcacgatat gcccatgaaa ataataaatg tcattcacta catggatatg
     7681 tgccactcgc tcgttatcct gatacagata tcttttagag ccgaaaaatt ggtttaagcg
     7741 ttctttacgt gcgctatctg tcatggtcgt cactcctttt aacaattagg cagtccaaac
     7801 gacatgcatt cgtaatatag ttcttcattc cttatgcttg tcttatagtt ctcaatcaca
     7861 ttgctaactt ctttatgact cattgcttta acttgttcgt ctgtatattt ttcgcagtct
     7921 tctaattcca gttgctcctg taatgacatt acgtaatcaa cttgtttttg cgttgccatc
     7981 gttacccctc ccacaagtca aacactctat cgacgtaaaa cttcgccttt gctaaatcct
     8041 catgaccatt ctttaacggt gctctagaca agtatttgat tgcattacct attgcgaatg
     8101 ctaattgtgg tggatactgt gccgtaactt gttcgatgaa atctataatt tcaatgtcgc
     8161 cgtatgtgta atgcgcaggt tgtttaacat tgtcttgtgt ttcattcata tctacttttc
     8221 tgttactgat tatgctcatt atgcttcact ccatttcttg aacatttggt tataagtgac
     8281 atcgaaccag tacggatcac gtgaatgttt ttgaggcgtt ccatcataaa gccatggtct
     8341 taatcttctc tttctttcct cttcatattc cgctctcaca tttcgttggt atcggttcaa
     8401 aatcgctttt tttctgattt tttctctccc tttttcttca tcttttattt gactcttcat
     8461 atattcaact tcatctttag attttgagtc ctttcttcca cacaataatt catcgccgcg
     8521 cattttatgt ttgtatctat atctaagaag ttctggagat atatgatatt tttctgaaac
     8581 ttctctcaat gtcattagtt ttcctttaat acgcactctt ataacttttc ttctagccat
     8641 cattccacct ctaaatctaa aaccttgata tttataacgt tatattttaa tagttcacct
     8701 ggattattaa ataaatagtc cgccaaattt tctttttctt tatcaatctg attgtaatta
     8761 acactttcga cttctgtagg aattctaatg tcaacagaag cattgatata agcttgatgt
     8821 tgcatgcaat cacactccta atccttcata taaaacggag aagtaaaccc gtcactattc
     8881 aaattcaatc cttttgccca atcaacaggc ttattcatga tagtttcgat ttccttaagt
     8941 ccatttgaac ctctaggtat ttctacaatt acttcatcat ggacatggcc aactatttta
     9001 aaacctgatg cttcaagcct tgctatagaa atcgcaagta aatcccttgc agttgcttga
     9061 acaatattct cgactaactt cccaccatac gtttttaact ttgaccattt acggttaaga
     9121 tctaacccca taaattcaac aacttgacta ccccaactat tttcaccaac taaagctttt
     9181 ggataagcta aagctcttcc actaggcagt tcaatcatta gaaaaccttt tttcatataa
     9241 aatctaagtc catgtgtatg atgcgtcttt cgggatttta cagtattaat tgcagcctct
     9301 tggcaagcct tccaaaaatt aactatgtta ggatttgcgt tacgccaact atcaactaaa
     9361 ccttgtaatt cattttcttc aatgcccatt tccaatgcac ccatcgcttt taaagctcca
     9421 gcgccacctt gatagcctaa agctaattcg gacacttttc ctttttgtct gagagggtcg
     9481 cctttagtta tgctttctac cggtacatta aacatttgag aagccgatgc ttcatatatc
     9541 tttccgtgtg tgttgaacac atctaaacgc cattgttctt ttgcatacca tgctatgact
     9601 cttgcctcta ttgcagaaaa atcacttact gctagttcat taccttcttc agcagtaaat
     9661 gtcgtcctaa ctaattgact taataagtct tgaggatgaa cattgagtaa taaatctaaa
     9721 tcgtcaaaac gttgttcttt aataagatct cttgctattt ctaattcagt atctgaaata
     9781 taatgctttg ttaaattctg aagttgtaca cctctacctg cccatcttcc agtaccggca
     9841 ccgtagaatt gaaacagacc tcttacccgt tcatcactgc acatcatgtc atgcattttg
     9901 ttgtattttt tcacactggt tttagacatt tgcaatctaa tttctagcat ttttttagct
     9961 tttcctgttg ctacttttaa gtaatcctga accgttttct tttgtaaatt aggtatatct
    10021 aatccttgtt catcctttaa ccaagccaat aactgtgtag gactattagg attttctaaa
    10081 cctgttatat gtttagcttg tttaagcaat tcttctttac tctgcttatc gagcacatta
    10141 gctcctaaca tcaatgattt agaaagctta atacctctgt cgtttatatg ttggtcaaaa
    10201 acccaatatg cttgttcaat tacagttact ggaaagtctt taattttatt agcaattgtc
    10261 atttctactt ctacatctcg aatacagtaa tctataaatt gttgccattt ttcaagatca
    10321 tgttcaggca agtttcttgt tcttcctcca ttaacttttg ttggtttaca aggtatagag
    10381 aaataacgaa ttaaattttt acctgcttta tctttttggt tttgtagtct taaaacttct
    10441 ccaactttat caagcgaagc aggtaagcca atacgcattg aattaaccat tgtgcaaatc
    10501 cattcttcag gtggcatctg tttattaaaa tatttagcaa gacaagttct ttcgaaatta
    10561 gcattgaatg catacttttt tacagcaggg tcaaatagag caattttaaa cgtctcataa
    10621 tcagcgtgga aaggctcagt atctacttta gtcatgtcaa tcgcactaat cgctccacca
    10681 tctattgaat aagctataat taagatttcg aaatcttcag cttctgtgta tttatagaca
    10741 ccacatttcg aaatatcgtt actgctatat gtttcaatat ctatattcat aaatttcaaa
    10801 ttcttgacac ctcaatttct ttaaaattaa agtggggcta aaaaccccac ctattgactt
    10861 ataagaaatc ctcatcatca gtgtctaatt catcgaaatc atcttctgct gcacttgcac
    10921 cgccaagagg ttcgcctttt tctacaagtt gaatgttgtt gagccctgct gcaattcctt
    10981 tatttccatt tacgttataa ccatagaaat tgattacagc tctgatatag tctccgctaa
    11041 caactgaacc aggttcgttc aaacgaacca tggcaggact aactacacct ggtgcatttt
    11101 gacttgtagc attaataaaa tacgcatttt cataattcgg atcatcttca cgatcaatgt
    11161 ctccatcacg taatggcgtt ttcaagttat taggtatctt gccgttccat ttacctttaa
    11221 atgcttcttt tgcattctca attgcttttt cgataatctc gaccatttgg gtgtcttctt
    11281 taggaataat aagtgaaacc gaatattttt ttggtgtgct ttcatccata ctgtgcggtt
    11341 caaaaatatg tgcatatgat gctcttactt ttcctgtaat cactttagtt tcatttttta
    11401 attgtgcttt catgtttata taccgtcctt tttaattttt atagtttgtc aaaatcatct
    11461 tcagcagatt gctttatagc tggtcgttta tcagactcgg tagcaagtgt taatttacct
    11521 tgtggctttt ctataaagcc ttctgcaatt ttagaaaatg cttttttgcc gattaatttt
    11581 tctaaattcg taatgctaag taacttggtt tctgtaatat cttcaggttt ataacccgct
    11641 tcaactaact tttcaagcgt tgcatttgta tcagttatca ttcttcgcga gcgaccttct
    11701 acaagcttcc aaccaggata gtttttatca ttttctttcg cttgatctag tgcatatttt
    11761 tctacttcat cagcccattt tttgatgtca ggcagtttat ataaaagttc tgcaatctct
    11821 tcatcactca acaaatgtgg tggcttttga ggcacatttt gcatgtattc tgcacgtgtt
    11881 ctacatgaat gctttatctt acagaatcta caatgactac ctgctttaaa ctcaccttca
    11941 ccgttataag caagtctggc taatggttta acaaaatcgg ttccccattg aagtaatctt
    12001 gatattggta actcttcagt agaaaagtta tctattcgtg gttgtatgat agtcatgcga
    12061 actgtatgaa tgtcatacat taaactaagc agttcatatg cgcccaagcc atataatcta
    12121 agttgaggat tatctatagc tgaaacttca atgcctttac cgtatttaag gtcaataatt
    12181 tcaagtacac cacctgaaaa tataatgaca tcaccagtac caaaagattc agggacgtat
    12241 ttacctaaat ccaattttgt ttcaaataaa gctattacat cgtcatctct actcaaagct
    12301 tcgttatatt tttcttctac attagctacg tactcttcaa catattcgcg caactcttca
    12361 ctgtaatatt gatttcgctt ataattttga aaagctttat taaactcaaa ctgtgttagg
    12421 ccttcatatt taagactgaa atataactca cttaactcat gagcgaatgt accttcttca
    12481 gcaaaaactg aacttttatc tgcaatacct tcacttgcct taatactcgg tggacagttt
    12541 agccattgtt ttgctccact tgcactaagc tttgcatgag ctctatttga gtgatctagc
    12601 ttcatgcatt tattctcgca ttcataaaat caacaatttt ttcataatgc tcttctttga
    12661 tagtagatag cttatccgca ccaagttcgt taagtttatt tctaaattct ttcttatcag
    12721 aagtatctgc ttttttaagg aactcttttc ctactgataa aacataatct ttagttaaat
    12781 cagcagaagt ttccttaact tcttcaactg attccagttg agctgtttca tcttttggca
    12841 ttggtgcttc tttaactttc tcttgtacaa ttgatgaatc tacagttgat agttcagtat
    12901 ttagcacacg taaattctta tttaatagtt ttaattcttc aaaaatacct tctaatattg
    12961 ccattgatta actcctcctt aaaattggtt ggctaaacga atcattaact tgatgcgttc
    13021 ttctatttct ctagggtcat cactttgttc gtttaatctt gccaataact cgaattgttc
    13081 ttctaatatc tctttcttac gttctacaac agttaaatgt aactgcggtt caacaacacg
    13141 ccagataccc caactttcca attcaatctt tccttttttc ttaagtcttg aaagtgtgga
    13201 ttttgcatgt gttttagata tcccaaaaac ttcaacaaca tcatcagaat tgaaattgtc
    13261 atatgttgca aaatgtgata gtattttttg ttgtaaggtc atattaataa ctccttatat
    13321 aattatttaa gacaattgct catcttgcac tgttacttgc tccaacaagt agcagtttct
    13381 ttattcttca taaaagtatt ccttataaaa tatgaatgtt gcgatacttg cgaatcccgc
    13441 aattgaccat gctgtagtga agtatagaaa cggcatgagt acaatcgcta agaccgtgaa
    13501 gcacaacact gctaataggt agcttttata tgtgtcgctc atttgataat cctcctaata
    13561 ccatttttta tgctttctga tcaaatactc ttctaattta gaaatattaa tcaatgttcc
    13621 cgttgctgaa taatcaatgt ataaattttc tacacctaaa ttatcttcac ggtaatattt
    13681 caaccagttg tatactgtac ttctacatac tccaaacaat tgatggattt gtgtaggtgt
    13741 tgcgtataac tttttcacaa atttttcttc gcctcgatat gtgttttctg gtgttggtgg
    13801 tattatgatt tttggcatct ctatcactcc tttagataaa tgttaaagtt tgttattatt
    13861 cgccctgtat tgaagttctc tatctaatgc atagaaaact ttgtttattt ctaagtagct
    13921 gtaatcactt tttttaataa gctctaatat ttccgctcct aagttacgtt ccttttccgt
    13981 taaataggat gaagaagcat cagctttgct agaaacttgt gggacgccta tacgcaatcc
    14041 ttctgatctt gtgttcattt gtttatgctc ctttcgtgta taatgttgtt atcaacctaa
    14101 ggaggtgata acatgccctt gatatctgat gaatttgata cacttactaa agaccaacaa
    14161 tatatcttgt ccgtactcta caaagattat ttagaatgtg taaagttagg ttcggttaaa
    14221 ttaacctgca ataattttgg aagtgctaaa gatatacata caaagtattt tcaaaaacta
    14281 catttcgaag atgtaaaata cgatttaaat aaacttaaaa actctgggtt cctaaacggc
    14341 gtgtatgcta gtaacactat ttatcatgta acaatttcag acaagactgt tgtttacttt
    14401 gaaaatgagt ttaaaaacaa tttaaaaagt atcattgata gcatttctaa aattgcttca
    14461 ataattcctg gtctctagtt gggtttataa cttcccaatc atttgccatg aggtcatcgg
    14521 ctgaaggttg ccaatatctg ataaggtttg tcccatcgct atttgaaatg atgcattgta
    14581 aaaaactatc atttgttggt aatatcttag ttcgatgact ttctttccaa tctttccgtg
    14641 tcatagagac aagatttttt gtagctatct tagttgcttc ttgaatgttc atttgttatt
    14701 cctcctttta agatgtttat gatcctttct gctatactcc tgttatggag gtgataggat
    14761 gaaacttaat cacgattgcg ttagactctt gctcttagaa atagaatcta ataagaaaat
    14821 aggtgaacca cttactcgac ataatttcaa cgataatatt atttttgata aatatgattt
    14881 tgaaacagta atgtactcac ttttaaaatt agaagaagct aaatttattt gttgcgatct
    14941 gaaattcatc gaaggcaggg tcgtttcttg gattattgat gacatcactt ggtctggcca
    15001 tgaatttctc gataatatta gagacaataa aacttggaac gaagttaaaa gagtcgttaa
    15061 caaaacatcc agtatgtctc ttaatcttat ggggaaatta gcttttcaat atctttctca
    15121 aaaattcaat ctaacttaaa ttcataacca tcaaccaagg catataagtt attatttacg
    15181 tatggtattt cttcaatggt gttgttgatg aaatgagatc ggaccatcag ttcatatccg
    15241 tcattaattt gaatatctaa tggtcgccta ttaccttctt cgtcatagta gtaatagatg
    15301 acttttttgt tttgagcttg catttgtcgt tcctccttta agttgttttg ttatataatt
    15361 tagttatctc ccagtggaag gaggtgaaat ttatggattt agagaaaatt gctcacgata
    15421 ttacaatctc gctattacct agagctctag atagacataa gattcataac gaatggcaag
    15481 aagtcggtga tgacgtaatt gcattcgcta aagatagcgt tgctcgtgac tatttcagca
    15541 tttactcttc tgtgttattg ggattacaag aagaagaaaa aagcagaaaa gatttaggat
    15601 tgtaaggcaa tagcgcactt gattacttgc actaattaag tgcgcttatt taattagata
    15661 tttcttacct tctctatccg agaccacttt atattttttt aatttgcttt ctttcacttt
    15721 taaccattga tttccatgcc acacgtcaat taagttttcg tgttttttat tgaatagcct
    15781 tcttagtagt ttcatttgta gttcctcctt cattcgaaat catcgatagt taattctgaa
    15841 actctctttt catagatata taaataatag tttttgatat ctctataaat ttttgctgct
    15901 aggttgtatt cactttcact caagtctgaa ttaagtgtca ctccaaaaat tgataatgtt
    15961 aattttctaa tatggtcatg aacatcttgt acataagctt tttgatgaat tgattcgaag
    16021 ccatgctgat acttttttag cggaatcgga tgattgagct tcctcaatct tcctagcgac
    16081 aaatcttttg cgaaattgag ttttttattg atttcttcta aatcgtcatt attgattctt
    16141 actttactga aaattgcacc tgagctgatt ggtttctcgc cttttatagc atttctaact
    16201 tctttcgcta taatttcttt caactcttct ttggttaacg ttatttgttc catagtgtcc
    16261 tccttatttt tatttagttg tcactttcga aacttaaagt ttaaaaaaaa tcatcaactt
    16321 taacatttaa atgatctgct aattttttag cttctgaagt tgtaaaatct ctgccattaa
    16381 ttcgatttat ctttatactc aataaacttc tactcattcc gattgcttta gcaacttctt
    16441 tttggttagt tcctttaagt gcaatcaagc tttttatttt taagtatggt ttatctgcta
    16501 cactagttgt cattgaaccc cctccttttg tttcgtttgt aacaacttgg tttaagaata
    16561 catcataaaa gtttcgatgt caacaacttt tgcaataata ttttccttgc gtttcgtttt
//
LOCUS       DAKPJH010000057        15955 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.057, whole genome shotgun sequence.
ACCESSION   DAKPJH010000057 DAKPJH010000000
VERSION     DAKPJH010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15955
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.057"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            29..1639
                     /locus_tag="OY092_001583"
     CDS             29..1639
                     /locus_tag="OY092_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MutS family DNA mismatch repair protein"
                     /protein_id="HCX1076527.1"
                     /translation="MSTNQTFLIFVIAIILLTSVIGIVGRYMSRQRLLKSMETLWQTI
                     SPLEAFIRPNSHFDYEYKLYKEKFESHSLVDDKTWSDLNMNAIFHKMNYNLTAIGEMK
                     LYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALVGKTVYPTFPDQITPVKRQNIL
                     FLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLKRTYEDDLKSIFYASNVLK
                     QGYTISKIKHAPQPEVNFKQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDYVLF
                     HSIQKSYTTHMNELKNCFDYIAELDNHYALAMYRRTLECYTEPQIDDSNDGIVFSELT
                     HPLIADAVANDFSLSQNILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPG
                     IVFTSMANADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAAS
                     ESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDYKIKPGKAN
                     TRNAIELLKITSFPTKIYERAKDNVPKI"
     gene            complement(1741..2766)
                     /gene="tsaD"
                     /locus_tag="OY092_001584"
     CDS             complement(1741..2766)
                     /gene="tsaD"
                     /locus_tag="OY092_001584"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HCX1076528.1"
                     /translation="MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFG
                     GVVPEVASRHHVEGITTTINEALVDADVSMEDIDAIAVTEGPGLIGALLIGVNAAKAL
                     AFAYDKPLIPVHHIAGHIYANHIEEPLTFPLIALIVSGGHTELVYMKDHLSFEVIGET
                     RDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKS
                     AVINQLHNQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKKYGVQRLIVAGGVASN
                     KGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHYLYQQGRFADLALNGHSNID
                     LEEYSAE"
     gene            complement(2759..3223)
                     /gene="rimI"
                     /locus_tag="OY092_001585"
     CDS             complement(2759..3223)
                     /gene="rimI"
                     /locus_tag="OY092_001585"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001611465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HCX1076529.1"
                     /translation="MDQQSKEQLNIREMTKEDVPQVFDIERRSFNDSSWTIDAFYHEI
                     EQNNFAKYFVLEFEQQIIGYLGLWIVIDQAQITTVAIDDNYRGYGLGQMLLKYGINYA
                     SHTCDVMSLEVRVNNKVAQHVYENLGFQYGGKRKNYYGEGEDAMVMWVNLND"
     gene            complement(3196..3858)
                     /gene="tsaB"
                     /locus_tag="OY092_001586"
     CDS             complement(3196..3858)
                     /gene="tsaB"
                     /locus_tag="OY092_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HCX1076530.1"
                     /translation="MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAIS
                     QLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAAT
                     IDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
                     IGKDTVKLQDELQGDVIAQLPNASVMHQLIDKPSDVHTFTPKYHKLAEAERNWINSQK
                     NN"
     gene            complement(3839..4300)
                     /gene="tsaE"
                     /locus_tag="OY092_001587"
     CDS             complement(3839..4300)
                     /gene="tsaE"
                     /locus_tag="OY092_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HCX1076531.1"
                     /translation="MIKINNLDEMNQFAMFLVEQLKSGDLILLNGDLGAGKTTLTQFI
                     GKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIE
                     WSQFIKDLLPSTHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH"
     gene            4338..4493
                     /locus_tag="OY092_001588"
     CDS             4338..4493
                     /locus_tag="OY092_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076532.1"
                     /translation="MIIHCSIVSNFIFNLYIVTNFNLNFLSLKQIISSKLIVRKFKIF
                     VDILKQI"
     gene            4811..6499
                     /gene="ilvD"
                     /locus_tag="OY092_001589"
     CDS             4811..6499
                     /gene="ilvD"
                     /locus_tag="OY092_001589"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HCX1076533.1"
                     /translation="MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYID
                     IVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADA
                     AETVINAHWFDGVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTL
                     SSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNG
                     TALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLH
                     TLAIANEAGIDYDLERINAIAKRTPYLSKIAPSSSYSMHDVHEAGGVPAIINELMKKD
                     GTLHPDRITVTGKTLRENNEGKEIKNFDVIHPLDAPYDAQGGLSILFGNIAPKGAVIK
                     VGGVDPSIKTFTGKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAP
                     TSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALIEDGDEITIDLTN
                     RTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQVPENLI"
     gene            6527..8296
                     /gene="ilvB"
                     /locus_tag="OY092_001590"
     CDS             6527..8296
                     /gene="ilvB"
                     /locus_tag="OY092_001590"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HCX1076534.1"
                     /translation="MSKTQHEVNQNIDPLKMAESLEPEQLNEKTLNDMRSGSEVLVEA
                     LLKENVDYLFGYPGGAVLPLYDTFYDGKIKHILARHEQGAVHAAEGYARVSGKTGVVV
                     VTSGPGATNVMTGITDAHCDSLPLVVFTGQVATPGIGKDAFQEADILSMTSPITKQNY
                     QVKRVEDIPKIVHEAFHVANSGRKGPVVIDFPKDMGVLATNVDLCDEINIPGYEVVTE
                     PENKDIDTFISLLKEAKKPVVLAGAGINQSKSNQLLTQFVNKHQIPTVTTLLGLGAVP
                     YEDTLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASKPDAFAPNAKIVHVDID
                     PSEINKVIHADLGIIADCKRFLECLNDKNVETIAHSDWVKHCQNNKQKHPFKLGEKDP
                     VFCKPQQTIEYIGKITNGEAIVTTDVGQHQMWAAQFYPFKNHGQWVTSGGLGTMGFGI
                     PSSIGAKLANPDKTVVCFVGDGGFQMTNQEMALLPEYGLDVKIVLINNGTLGMVKQWQ
                     DKFFNQRFSHSVFNGQPDFMKMAEAYGVKGFLIDKPEQLEEQLDAAFAYQGPALIEVR
                     ISPTEAVNPMVPSGKSNHEMEGL"
     gene            8296..8550
                     /locus_tag="OY092_001591"
     CDS             8296..8550
                     /locus_tag="OY092_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HCX1076535.1"
                     /translation="MTRILKLQVADQVSTLNRITSAFVRLQYNIDTLHVTHSEQPGIS
                     NMEIQVDIQDDTSLHILIKKLKQQINVLTVECYDLVDNEA"
     gene            8688..9692
                     /gene="ilvC"
                     /locus_tag="OY092_001592"
     CDS             8688..9692
                     /gene="ilvC"
                     /locus_tag="OY092_001592"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HCX1076536.1"
                     /translation="MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVV
                     IGIRPGRSFDKAKEDGFDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNA
                     LAFAHGFNIHFSVIQPPADVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQDASGQA
                     RNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGY
                     QPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKA
                     VLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
                     "
     gene            9722..11251
                     /locus_tag="OY092_001593"
     CDS             9722..11251
                     /locus_tag="OY092_001593"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HCX1076537.1"
                     /translation="MSSHIQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIE
                     AGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIAT
                     SPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVD
                     AGATVINIPDTVGYSYHDEYAHIFKTLTESVTSSNEIIYSAHCHDDLGMAVSNSLAAI
                     EGGARRIEGTVNGIGERAGNAALEEVALALYVRNDYYGAQTALNLEETKKTSDLISRY
                     AGIRVPRNKAIVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVSVSTTELPLGKLSGK
                     HAFSEKLKALGYDIDKEAQIDLFKQFKAIADKKKSVSDRDIHAIIQGSEHEHQALYKL
                     ETLQLQYVSSGLQSAVVVVKDKEDHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYR
                     INSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKFAAENVEKVG
                     N"
     gene            11254..12300
                     /gene="leuB"
                     /locus_tag="OY092_001594"
     CDS             11254..12300
                     /gene="leuB"
                     /locus_tag="OY092_001594"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HCX1076538.1"
                     /translation="MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFG
                     GASIDTFGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFAN
                     IRPTIVVKGASSLSPLKEDRVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTRE
                     EIERIVHVAFKLAASRRGKLTSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA
                     CSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGS
                     APDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQTTADLGGKLN
                     TTDIFEILSQKLNH"
     gene            12314..13684
                     /gene="leuC"
                     /locus_tag="OY092_001595"
     CDS             12314..13684
                     /gene="leuC"
                     /locus_tag="OY092_001595"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HCX1076539.1"
                     /translation="MGQTLFDKVWNRHVLYGKLGEPQLLYIDLHLIHEVTSPQAFEGL
                     RLQNRKLRRPDLTFATLDHNVPTIDIFNIKDEIANKQITTLQKNAIDFGVHIFDMGSD
                     EQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQT
                     KPKNLKIDINGTLPTGVYAKDIILHLIKTYGVDFGTGYALEFTGETIKNLSMDGRMTI
                     CNMAIEGGAKYGIIQPDDITFEYVKGRPFADNFAKSVDKWRELYSDDDAIFDRVIELD
                     VSTLEPQVTWGTNPEMGVNFSEPFPEINDINDQRAYDYMGLEPGQKAEDIDLGYVFLG
                     SCTNARLSDLIEASHIVKGNKVHPNITAIVVPGSRTVKKEAEKLGLDTIFKNAGFEWR
                     EPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAIHGKFVD
                     VRKVVV"
     gene            13685..14257
                     /gene="leuD"
                     /locus_tag="OY092_001596"
     CDS             13685..14257
                     /gene="leuD"
                     /locus_tag="OY092_001596"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HCX1076540.1"
                     /translation="MAAIKPITTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPF
                     AFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIII
                     AGSFSDIFYMNCTKNAMLPIVLEKNAREHLAKYVEIEVDLPNQTVSSPDKSFHFEIDE
                     TWKNKLVNGLDDIAITLQYESLIEKYEKSL"
     gene            14272..15540
                     /gene="ilvA"
                     /locus_tag="OY092_001597"
     CDS             14272..15540
                     /gene="ilvA"
                     /locus_tag="OY092_001597"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HCX1076541.1"
                     /translation="MTVKTTVSTKDIDEAFLRLKDIVKETPLQLDHYLSQKYDCKVYL
                     KREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTAKKLNLNAVIF
                     MPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFIDPFNNVHTI
                     SGQGTLAKEMLEQAKSDNVNFDYLFAAIGGGGLISGISTYFKSYSPNTKIIGVEPSGA
                     SSMYESVVVNNQVITLPNIDKFVDGASVARVGDITFEIAKKNVDNYVQVDEGAVCSTI
                     LDMYSKQAIVAEPAGALSVSALENYKDHIKGKTVVCVISGGNNDINRMKEIEERSLLY
                     EEMKHYFILNFPQRPGALREFVNDVLGPQDDITKFEYLKKSSQNTGTVIIGIQLKDDD
                     DLIQLKQRVNHFDPSNIYINENKMLYSLLI"
     gene            15741..>15955
                     /locus_tag="OY092_001598"
     CDS             15741..>15955
                     /locus_tag="OY092_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076542.1"
                     /translation="MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGV
                     DRRTVDKYLNGFEPTKKRNRQSIIDKY"
BASE COUNT         5417 a         2701 c         2816 g         5021 t
ORIGIN      
        1 attattcaaa ataaataagg agatacttat gagcacaaat caaacatttt taatatttgt
       61 tatagcaatt attctactta catctgtaat aggaattgtt ggacgataca tgagtcgtca
      121 acgtctatta aaatctatgg aaacattatg gcaaacgatt tctccattag aagcttttat
      181 cagaccgaac tcacatttcg actatgagta taagctctac aaggaaaaat ttgaatcaca
      241 ttcattagtt gatgataaaa cttggtccga cttaaatatg aatgcaatct ttcataagat
      301 gaattataat ttaacagcta ttggtgaaat gaagctatat gcctgtttac gtggaatgct
      361 ttcaattacg aacaaatcat tacttagttt atttaatgat aatgctgaat ttagaaaaaa
      421 cgtaacatat catttagctt tggttggtaa aactgtttat ccaacatttc cagaccaaat
      481 cacaccggta aaacgtcaaa atatattgtt tctatgccca tttttaccag ttatctcatt
      541 tgcagttata tttattaatt cacaagttgg tattttatta tttcttatga gttgcctatt
      601 taatatcatt ttatctgcaa ctttaaagcg tacatatgag gatgacttaa agtctatctt
      661 ttatgcatcc aatgttttaa aacaaggcta tactatctca aaaattaaac atgctccaca
      721 acccgaagtc aattttaagc aatttagaac agcacgtcat ttaacgagtg ttttagctga
      781 agttaatgat gaagatattg gagctatggt aattaaacta gttaaactta ttttcatgct
      841 tgattatgtt ttattccatt caattcaaaa aagctataca acacatatga atgagctaaa
      901 aaattgtttc gattacatag ctgaattaga taatcattat gcattagcaa tgtatcgtag
      961 aacgctagaa tgctatactg aaccacaaat tgatgattca aatgatggca tagtattctc
     1021 tgagttaaca catccactca tagcagatgc agtagccaat gatttctcac tatcacaaaa
     1081 tatactgtta actgggtcta atgcttcggg taaatcaaca tttatgaaat ccatagcaat
     1141 aaacattatt cttgcatcgg ctatacaaac agttaccgca agcaaatttg tatatcaacc
     1201 tggaattgtg ttcacgtcaa tggcaaatgc cgatgatgtg ttatcaggcg atagttattt
     1261 tatggctgaa ttaaaatcta ttaagcgtat tgttgaaatt ccagacaatc aaaaaatata
     1321 ctgctttata gatgaaattt ttaaaggtac caacacaact gaacgaattg ccgcttcaga
     1381 atcagtacta tcatttttac atgaaaaatc taactttaga gttattgcag caacacatga
     1441 tattgagtta gctgaactct taaaacaacg ttatgaaaat tatcatttca atgaggtaat
     1501 agaaaataat aacatacatt ttgattacaa aattaagcct ggcaaagcaa atacacgtaa
     1561 tgccatcgaa ttattaaaaa tcacttcatt tccaacaaaa atatatgaac gagcaaaaga
     1621 taatgtcccg aaaatttagc atttaacttt aaacataaaa acgtcagcta tcacatgaca
     1681 gaagactatg aacagtttca ataatgttca tcgtaatcat gttaataact gacgtttatt
     1741 ttattctgca gaatactctt ctaaatctat attgctgtgc ccatttaatg ctaaatcagc
     1801 aaatcgacct tgctgataca aatagtggcc ggcaacgcct atcattgcag cattatctgt
     1861 gcataattta ggacttggga tagttaattg aatgtcattg actttgcatt gatccgctaa
     1921 agattgacgt aatcctttat tactcgccac gccaccagca acaattaatc gctgaacacc
     1981 atatttttta caagcttgaa tagctttaaa cgtaagcacc tctacaacac tgttttgaaa
     2041 gctcgttgct acgttagctt caatgattgg aatatttttt tgtcgttgat tgtgaagttg
     2101 attgattacg gcacttttca acccactaaa actaaaatca taactatctt tatccaacca
     2161 aacacgaggg aatgaataag tatcttcacc ttcagcagcc aaccgatcaa cttgtggacc
     2221 acctggataa tttaaaccaa ttgttcgtgc cactttatca taagcttcac ctactgcgtc
     2281 atctcgtgtt tcaccaatga cttcaaatga taaatgatct ttcatataaa ctaattcagt
     2341 atgtccacct gaaacaataa gtgcaattag cgggaatgtt aatggctctt ctatgtgatt
     2401 agcatatata tgtcctgcaa tatgatgaac aggaataagt ggcttatcgt aagcaaatgc
     2461 caatgctttg gctgcattaa cacctattag taacgcacca attagtccag ggccttctgt
     2521 aaccgctatg gcatcaatat cttccattga tacatcggca tccactagag cctcgtttat
     2581 tgttgttgtt ataccttcaa cgtgatgtct acttgccact tcgggaacga caccgccaaa
     2641 tcgtttatga ctttcaatct gacttaaaac tgtatttgat aaaatatctc tgccattttt
     2701 tataacacta acgcttgttt catcacaact tgtttcaaca gctagtatta atatatcttt
     2761 agtcatttaa attcacccac ataaccattg cgtcctcacc ttcaccataa taatttttac
     2821 gtttaccacc atattgaaat cctaaatttt catatacatg ttgtgccact ttattattaa
     2881 ctcttacttc taaactcatc acatcacaag tgtgacttgc atagtttatt ccgtatttta
     2941 aaagcatttg acctaaacca tagcctctat aattatcatc gattgcaact gtcgtaattt
     3001 gagcttgatc gataacaatc cataaaccta aataaccaat aatttgttgt tcaaattcta
     3061 agacaaaata tttcgcaaag ttattttgtt ctatttcatg ataaaatgcg tcaattgtcc
     3121 aagaactatc attgaaactc cgacgctcaa tatcaaagac ttgtggcaca tcttctttgg
     3181 tcatctctct aatgtttaat tgttcttttg actgttgatc caatttcgtt ccgcctcagc
     3241 taatttatgg tatttaggag taaatgtatg tacgtctgaa ggtttatcta tcaattgatg
     3301 catgactgat gcatttggta gctgcgcaat cacatcacct tgtaattcat cttgtaattt
     3361 tacagtatct ttcccaatat aaataaatgg ttggtttaaa tcttctaaaa aagctcgcaa
     3421 tgcctctatc gacatatatt gatcttctaa aatagtcact aattgaccat tttgccactg
     3481 gaatatgcct gtataaactg cttgtcgtct tgcatcaaac acaggaacca ataatttatc
     3541 agtatgatcg attgttgctg ccaatgcctt taatgatgaa acaccatata atttaacatc
     3601 taacgcatac gctaatgttt tagcaacagt aacaccgata cgtaagccag tatatgaacc
     3661 aggaccttca gcaacaataa tcgcatctaa ttgctgttta gctattttgc tctgctcaaa
     3721 tagctgacta atcgcaggca ttaattgcac tgaatgattt tgtttagaat ccgtagttat
     3781 ttcagctaaa acttcatcgt tttgcatcaa tgctactgat aatggttgat tcgatgtatc
     3841 aatgagcagc gaattcatgg ataattgcct ccttaatttg ttcataatgt tctccttgcg
     3901 cgaacaactc aatttgtctt gtattttcag atattgttga aatattaata gataaatgcg
     3961 tcgatggaag taaatctttt ataaattgac tccattcaat aacagtaatt gcctgatctt
     4021 cgaaaaattc atcaaaccct aaatcttcat cagaatcttc taagcgataa caatccatat
     4081 gatgcaattt taaattttta cccctatatg atttaatgat gttaaatgtc ggggaattaa
     4141 tcgttcgtct tacaccaaga gcttttccta taaattgcgt taacgttgtt ttacctgctc
     4201 ctaaatctcc gttaagtaaa atcaaatcac cacttttcaa ttgctcaact aaaaacatag
     4261 caaattgatt catttcatct aaattattta tctttatcaa tgttgattct cctatattgt
     4321 gcttttcatt cataaaaatg attatccatt gttcaatcgt atctaacttt atatttaacc
     4381 tttatattgt aacaaatttc aacttaaatt tcttatcttt gaaacagatt atctcttcaa
     4441 agttaattgt aagaaaattt aaaatatttg ttgacatact aaagcagata tagtaaatta
     4501 aatttatcaa atttttagac aattctaact attaaagtga tatataccat tcacggaagg
     4561 agtataataa aatgcttaat caatatactg aacatcaacc gacaacttca aatattatta
     4621 ttttattata ctctttagga ctcgaacgtt agtaaatatt tactaaacgc tttaagtcct
     4681 atttctgttt gaatgggact tgtaaacgtc cccataatat tgggacgttt ttttatgttt
     4741 tatctttcaa ttacttattt ttattactat aaaacatgat taatcattaa aatttacggg
     4801 ggaatttact atgcgaagcg acatgatcaa aaaaggagat caccaagcac cagcaagaag
     4861 tcttttacat gccacgggcg cgctaaaaag tccaactgat atgaacaaac catttgtagc
     4921 tatttgtaac tcttatattg atattgttcc tggacatgtt catttaagag agcttgcaga
     4981 tatagctaaa gaagcaatta gagaagccgg tgccattcca tttgaattca atacaattgg
     5041 tgttgatgat ggaatagcta tgggacatat cggaatgcga tattctctac catcacgtga
     5101 aattattgca gatgcagctg aaactgtaat taacgctcat tggtttgacg gcgtatttta
     5161 cattcctaat tgtgacaaga ttacacccgg tatgatttta gcagccatga ggacaaacgt
     5221 accagctatc ttttgctctg gtggaccaat gaaagctggc ttatctgcac atggaaaagc
     5281 attaacactt tcatcaatgt ttgaagcagt cggcgcattt aaagaaggat cgatttctaa
     5341 agaagaattt ttagatatgg aacaaaatgc ctgccctact tgtggttcat gtgctgggat
     5401 gtttactgca aattcaatga actgtttgat ggaagtttta ggtctagcat taccatacaa
     5461 cggtactgca cttgcagtca gtgatcaacg acgcgaaatg attcgccaag cagcttttaa
     5521 attagttgaa aatattaaaa atgatttaaa accacgtgat atcgttactc gcgaagcaat
     5581 tgatgatgca tttgcacttg atatggctat gggtggttca acaaacacag tactgcatac
     5641 gttagccatt gccaatgaag ctggtattga ttatgactta gagcgcatta atgctattgc
     5701 caaacgcacg ccatatttat caaaaatagc acctagttca tcgtattcaa tgcatgatgt
     5761 gcatgaagct ggtggcgtcc cagcaattat taatgaattg atgaagaaag atggcacgtt
     5821 acacccagat agaatcacag ttactggcaa aacgttacgt gaaaataacg aaggcaaaga
     5881 aattaagaac tttgatgtca ttcaccctct tgatgcacca tatgatgcac aaggcggttt
     5941 atctatctta tttggtaata tcgcccctaa aggcgcagtt attaaagttg gcggcgttga
     6001 tccatctatc aaaacattta ctgggaaagc aatttgtttc aattcgcatg atgaagctgt
     6061 tgaagcaata gacaatcgta ccgttcgtgc aggccacgtc gttgtcatta gatatgaagg
     6121 acctaaaggt ggaccaggta tgcctgaaat gttagcacct acttcctcta ttgttggtcg
     6181 cggcttaggt aaagatgttg cattaattac tgatgggcgt ttttccggtg ccacaagagg
     6241 tattgcagtt ggtcatattt cccctgaagc tgcatctggt ggaccaattg ccttaattga
     6301 agatggagat gagattacta ttgatttaac aaatcgtaca ttaaacgtaa accagcctga
     6361 agatgttcta gcgcgtcgcc gagaatcttt aacaccattt aaagcgaaag taaaaacagg
     6421 ttatctagct cgttatactg ccctagtaac tagcgcaaat acaggtggcg tcatgcaagt
     6481 ccctgagaat ttaatttaat ttatttttat attggagatg gttaaaatgt ctaaaactca
     6541 acatgaagta aaccaaaata ttgacccttt aaaaatggct gaatcacttg aacccgaaca
     6601 actaaatgaa aaaactttaa atgatatgcg ttcaggatca gaagtgctag tagaagctct
     6661 acttaaagaa aatgtggatt atttattcgg ttatcctggt ggtgccgtac tacctttata
     6721 tgacacgttt tatgatggta aaatcaaaca tattttagca agacacgaac aaggtgctgt
     6781 tcatgctgca gaaggttatg cacgtgtatc tggtaaaact ggcgtcgttg tagttacaag
     6841 cggtccaggt gcaacaaatg taatgacagg tattacggat gcacattgcg actctttacc
     6901 tctagttgta ttcaccggac aagttgctac accaggcatt ggtaaagatg cattccaaga
     6961 agcggatatt ctatctatga cttcaccaat tacaaaacaa aattatcaag tgaaacgtgt
     7021 tgaagatatc cctaaaatcg tacacgaagc tttccatgta gcgaattctg gacgcaaagg
     7081 tcctgtagtg attgattttc caaaagatat gggtgtttta gctacaaatg tggatttatg
     7141 cgacgaaatc aatattccag gttatgaagt tgttacagaa ccagaaaata aagacattga
     7201 cactttcatc tcacttttaa aagaagcgaa aaagcctgtc gtattagccg gcgcaggtat
     7261 taatcaatca aaatcaaatc aattattaac acagtttgtt aataaacatc aaatcccaac
     7321 agttactact ttactaggtc taggtgctgt accttatgag gatacactat ttttaggtat
     7381 gggaggtatg catggttctt atgctagtaa catggcatta actgagtgtg atttactcat
     7441 taatttaggt agccgcttcg atgatagatt agcaagcaaa cctgatgcct ttgcacctaa
     7501 cgccaaaatt gtacatgtag atattgatcc ttcagaaatc aataaagtta ttcatgcaga
     7561 tttaggtatt attgcagact gtaaaagatt tttagaatgt ttaaatgata aaaatgttga
     7621 gactatagca cacagtgact gggttaaaca ttgtcaaaat aataagcaga aacacccatt
     7681 taaacttggt gaaaaagatc cagtattttg taagccacaa caaacaatcg aatatatcgg
     7741 caaaattaca aatggtgaag caattgttac tacagacgtg ggacaacatc aaatgtgggc
     7801 agctcaattt tatccattta aaaatcacgg acaatgggtt acaagtggtg gtttaggaac
     7861 aatgggattc ggtattcctt cgtcaattgg tgccaaatta gctaatcctg ataaaacagt
     7921 cgtatgtttc gtcggtgacg gtggtttcca aatgacaaac caagaaatgg cactattacc
     7981 cgaatatggt ttagatgtca aaatcgtact aatcaataat ggaacactag gtatggttaa
     8041 acaatggcaa gataagttct ttaatcaacg cttctcacac tcagtattta atggtcaacc
     8101 tgattttatg aaaatggcag aagcatatgg cgtcaaaggt ttcttaatcg ataagccaga
     8161 acaactggaa gaacaattag atgcagcgtt tgcttatcaa ggaccagctt taattgaggt
     8221 tcgtatttcc cctactgaag ctgtaaaccc aatggttccg agtggcaaat caaatcatga
     8281 aatggagggc ttataatgac aagaattctt aaattacaag ttgcggatca agtcagcacg
     8341 ctaaatcgaa ttacaagtgc ttttgttcgc ctacaatata atatcgatac attacatgtt
     8401 acacattctg aacaacctgg gatttctaac atggaaattc aagtcgatat tcaagatgat
     8461 acatcacttc atatattaat taaaaaatta aaacaacaaa ttaatgtttt aacggttgaa
     8521 tgctacgacc ttgttgataa cgaagcttaa ttttaagaca aaggcaatga tgcgctaatt
     8581 agttatagat atatcatagg ctgctagtta acatctgcca ctattacaaa gttatatttc
     8641 agaattttca aaaaaacaaa atatttaatt atttggagga atttattatg acaacagttt
     8701 attatgatca agatgtaaaa acggacgctt tacaaggcaa aaaaattgca gtagtaggtt
     8761 atggatcaca aggccacgcg catgcacaaa acttaaaaga caatggatat gatgtagtca
     8821 tcggtattcg cccaggtcgt tcttttgaca aagctaaaga agatggattt gatgtgttcc
     8881 ctgttgcaga agcagttaag caagctgatg taattatggt gctattacct gatgaaattc
     8941 aaggtgatgt atacaaaaac gaaattgaac caaatttaga aaaacataat gcgcttgcat
     9001 ttgctcatgg ctttaacatt cattttagtg ttattcaacc accagctgat gttgatgtat
     9061 ttttagtagc tcctaaagga ccgggtcatt tagttagacg tacatttgtt gaaggttctg
     9121 ctgtaccatc actatttggt attcaacaag acgcttcagg tcaagcacgt aatattgctt
     9181 taagttatgc aaaaggtatt ggtgcaactc gtgcaggtgt tattgaaaca acatttaaag
     9241 aagaaactga gacagattta tttggtgaac aagcagtact ttgcggtggt gtatcgaaat
     9301 taattcaaag tggctttgaa acattagtag aagcgggtta tcaaccagaa ttagcttatt
     9361 ttgaagtatt acatgaaatg aaattaatcg ttgatttgat gtatgaaggc ggtatggaaa
     9421 atgtacgtta ctcaatttca aatactgctg aatttggtga ctatgtttca ggaccacgtg
     9481 ttatcacacc agatgttaaa gaaaatatga aagctgtatt aactgatatc caaaatggta
     9541 acttcagtaa tcgctttatc gaagacaata aaaatggatt caaagaattt tataaattac
     9601 gcgaagaaca acatggtcat caaattgaaa aagttggtcg tgaattacgc gaaatgatgc
     9661 cttttattaa atctaaaagc attgaaaaat aagatagacc tacaatgagg agttgttaaa
     9721 tatgagtagt catattcaaa tttttgatac gacactaaga gacggtgaac aaacaccagg
     9781 agtgaatttt acttttgatg aacgcttgcg tattgcattg caattagaaa aatggggtgt
     9841 agatgttatt gaagctggat ttcctgcttc aagtacaggt agctttaaat ctgttcaagc
     9901 aattgcacaa acattaacaa caacggctgt atgtggttta gctagatgta aaaaatctga
     9961 catcgatgct gtatatgaag caacaaaaga tgcagcgaag ccggtcgtgc atgtttttat
    10021 agcaacatca cctattcatc ttgaacataa acttaaaatg tctcaagaag acgttttagc
    10081 atctattaaa gaacatgtca catacgcgaa acaattattt gacgttgttc aattttcacc
    10141 tgaagatgca acgcgtactg aattaccatt cttagtgaaa tgtgtacaaa ctgccgttga
    10201 cgctggagct acagttatta atattcctga tacagtcggc tacagttacc atgatgaata
    10261 tgcacatatt ttcaaaacct taacagaatc tgtaacatct tcaaatgaaa ttatttatag
    10321 tgctcattgc catgacgatt taggaatggc tgtttcaaat agtttagctg caattgaagg
    10381 cggtgcaaga cgaattgaag gcactgtaaa tggtattggt gaacgagcag gtaatgcagc
    10441 acttgaagaa gtcgcgcttg cactatacgt tcgaaatgat tattatggtg ctcaaactgc
    10501 ccttaatctc gaagaaacta aaaaaacatc ggatttaatt tcaagatatg caggtattcg
    10561 agtgcctaga aataaagcaa ttgttggcca aaatgcattt agtcatgaat caggtattca
    10621 ccaagatggc gtattaaaac atcgtgaaac atatgaaatt atgacacctc aacttgttag
    10681 tgtaagcacg actgaacttc cattaggaaa attatctggt aaacacgcct tctcagagaa
    10741 gttaaaagca ttaggttatg acattgataa agaagcgcaa atagatttat ttaaacaatt
    10801 caaggccatt gcggacaaaa agaaatctgt ttcagataga gatattcatg cgattattca
    10861 aggttctgag catgagcatc aagcacttta taaattggaa acactgcaac tacaatatgt
    10921 ctctagcggc cttcaaagtg ctgttgttgt tgttaaagat aaagaggatc atatttacca
    10981 ggattcaagt attggtactg gttcaatcgt agcaatttac aatgcagttg atcgtatttt
    11041 ccaaaaagag acagaattaa ttgattatcg tattaattct gtcactgaag gtactgatgc
    11101 ccaagcagaa gtacatgtaa atttattgat tgaaggtaag actgtcaatg gctttggtat
    11161 tgatcatgat attttacaag cctcttgtaa agcatacgta gaagcacatg ctaaatttgc
    11221 agctgaaaat gttgaaaagg taggtaatta attatgactt ataacattgt tgccctacct
    11281 ggtgatggaa tcggtccaga aattttgaac ggatctctat ccttgcttga aattataagt
    11341 aataaatata actttaatta tcaaatagag caccacgaat ttggtggtgc ctctattgat
    11401 acattcggcg agcctttaac tgagaaaacc ttaaatgcgt gtaaaagagc agatgctatt
    11461 ttactgggtg caatcggtgg acctaaatgg acagatccta acaatcgacc agaacaagga
    11521 ttattaaaat tacgtaaatc attaaattta tttgcaaata tacgccccac tatcgttgtc
    11581 aaaggcgcta gttctttatc acctttaaag gaagatcgcg ttgaaggcac agatttagtt
    11641 atagtccgtg aattgacaag tggtatttat tttggagaac ctagacattt taataatcac
    11701 gaggccttag attctcttac ttatacaaga gaagaaatag aacgcattgt tcacgtagca
    11761 tttaaattgg ctgcttcaag acgaggaaaa ctaacatcag ttgataaaga aaatgtatta
    11821 gcttctagta aattgtggcg caaagtcgta aatgaagtga gtcaattata tccagaagta
    11881 acagtaaatc acttacttgt tgatgcttgt agcatgcatt taatcacaaa tccaaaacaa
    11941 tttgacgtca tagtttgtga aaacttattt ggcgatattt taagtgatga agcttcagtg
    12001 attcctggtt cacttggttt atcaccttct gctagtttta gtaacgatgg tccaagatta
    12061 tatgagccta ttcatggatc agcaccagat attgcaggta aaaacgttgc caatccattt
    12121 ggaatgattc tatctttagc gatgtgttta cgtgaaagct taaatcaacc agatgctgca
    12181 gatgaattag aacaacatat ttacaacatg attgaacatg ggcaaacgac agcagattta
    12241 ggcggcaaac tgaatactac tgatattttc gaaattctat ctcaaaaatt gaatcactaa
    12301 gggggagatg taaatgggtc aaacattatt tgacaaggtg tggaacagac atgtgttata
    12361 cgggaaattg ggcgaaccgc aactattata cattgattta caccttatac atgaagttac
    12421 ttctcctcaa gcatttgaag gacttaggct tcaaaacaga aaattaagac gcccagattt
    12481 aacatttgca acactcgatc acaatgttcc tactattgat attttcaata ttaaagatga
    12541 aattgcaaac aaacaaatca caacattaca aaaaaacgcc atagattttg gggtgcatat
    12601 ttttgatatg ggctctgatg aacaaggtat tgttcacatg gtaggacctg agacaggact
    12661 tacacagccc ggcaaaacaa tcgtttgtgg tgactctcac acagcaacac atggagcatt
    12721 tggtgctatt gcatttggaa ttggaacaag tgaagttgaa catgttttcg caactcaaac
    12781 gctatggcaa acaaaaccca aaaacttaaa aatcgatatt aatggtacct taccaacagg
    12841 cgtctatgct aaggacatta ttctgcattt aattaaaacg tatggtgttg actttggtac
    12901 aggctatgct ttggaattta ctggcgaaac aattaaaaac ctttcaatgg acggtcgaat
    12961 gactatttgt aacatggcta tcgaaggtgg tgccaaatac ggcataatcc aacctgatga
    13021 tataacattt gaatatgtta aagggagacc atttgccgat aacttcgcta aatcagttga
    13081 taagtggcgt gagctatatt ctgatgacga cgcgatattt gatcgtgtaa ttgaacttga
    13141 tgtttcaaca ttagaaccac aagtgacatg gggaactaat cctgaaatgg gtgttaattt
    13201 cagtgaacca ttccctgaaa tcaatgatat caacgatcaa cgtgcgtatg attatatggg
    13261 attagaacca ggtcaaaaag ctgaagatat cgacttaggg tatgttttcc tcggttcatg
    13321 tacaaatgct agactatcag atttgattga agctagtcat attgttaaag gaaataaagt
    13381 tcacccaaat attacagcta ttgtcgtacc aggttctcgt acagtaaaaa aagaagctga
    13441 aaaattaggt ctagatacta tctttaaaaa tgcaggattt gaatggcgtg aaccaggatg
    13501 ttcaatgtgt ttaggcatga atcctgacca agtacctgag ggtgtacatt gtgcatctac
    13561 aagtaatcga aacttcgaag gacgacaagg caaaggtgct agaacacatt tagtatcccc
    13621 tgctatggca gcagcagcag ctattcatgg taaatttgtg gacgtaagaa aggtggttgt
    13681 ttaaatggca gcaatcaaac ctattacaac atataaaggt aaaatagtcc ctcttttcaa
    13741 cgataatatc gatacagatc aaatcattcc taaagtacac ttaaagcgta tttcaaaaag
    13801 tggctttggt ccatttgctt ttgatgaatg gcggtactta cctgatggtt cagataatcc
    13861 tgatttcaat ccaaataagc ctcaatataa aggtgcatcc atattaatta ctggagataa
    13921 ttttggatgt ggttcaagtc gtgaacatgc agcttgggca cttaaggact atggctttca
    13981 tattattatt gcaggaagtt tcagtgacat tttttatatg aattgtacaa aaaatgcaat
    14041 gttaccaatt gttttagaaa aaaatgcacg tgaacatctt gctaaatatg ttgaaattga
    14101 ggtcgattta ccaaatcaaa ctgtgtcatc accagacaag agtttccatt ttgaaattga
    14161 tgaaacttgg aagaataaac ttgtaaatgg cttagatgac attgcaatca ccctacaata
    14221 tgaatcatta atagaaaaat atgaaaaatc actttaaggg agttgaatat tatgacagtc
    14281 aaaacaacag tttctacgaa ggatatcgat gaagcatttt taagacttaa agatattgtc
    14341 aaagaaacac ctttacaatt agaccattac ttatctcaaa agtatgattg taaagtttat
    14401 ttaaaacgag aagatttaca atgggtacgt tcttttaaat taagaggtgc ttacaacgct
    14461 atttctgttt tatcagatga agctaaaagt aaaggaatta catgtgcgag tgcaggtaat
    14521 catgctcaag gtgttgccta tacagctaaa aaacttaatt taaacgctgt tatctttatg
    14581 ccagtcacta cacctttaca aaaggtaaat caagtaaagt tctttggaaa tagtaacgtt
    14641 gaagttgtac tcactggtga tacatttgat cactgtttag ctgaagcttt aacttataca
    14701 agtgaacatc aaatgaactt tatagatcca ttcaataatg ttcatacaat ttctggacaa
    14761 ggtacgcttg ctaaagaaat gctagaacaa gcaaagtctg acaatgttaa ctttgattat
    14821 ctatttgccg caattggtgg tggtggttta atttcaggta ttagtaccta ttttaaatcc
    14881 tattctccca acacaaaaat tatcggagtt gaaccttcag gtgctagtag tatgtatgaa
    14941 tctgttgtcg taaataatca ggttatcaca ttacctaata tcgataaatt tgtcgatgga
    15001 gcttctgtag ccagagttgg cgatattact tttgaaattg ccaaaaaaaa tgtagataac
    15061 tacgtacaag tggatgaagg tgctgtatgt tcaacaattt tggatatgta ttcaaaacaa
    15121 gcaatagtag cagaacccgc tggcgcttta agtgtaagtg cgcttgaaaa ctataaagat
    15181 catattaaag gtaaaacagt ggtttgtgtc attagtggtg gtaataatga tattaatcga
    15241 atgaaagaaa ttgaagaacg ttcattacta tacgaagaaa tgaagcatta ctttatctta
    15301 aatttccctc aacgtccagg tgcattgaga gaatttgtaa atgacgtatt aggacctcaa
    15361 gacgatatta ctaaatttga atacttaaaa aaatcttctc aaaatacagg tactgtcatt
    15421 attggtattc aacttaaaga tgatgatgat ttaatacaac tcaaacaacg tgtaaatcat
    15481 ttcgatcctt ccaatattta tattaatgaa aataagatgt tatattcatt gttaatttag
    15541 cacatagtaa gaaaagcagt cataaattga tttctgattg aaatcatctt atgactgctt
    15601 tttattatac tttacatttc tcgttcgtcg ctaagaacct ttcttgactg gaaatgataa
    15661 tttaataatg tacacttttg attgtttaaa catgtacaat ttttaaaaaa ctagagataa
    15721 ttttattgag gtgaacaaca atgaaattat ctttagacat aaatactgat tttgaagtta
    15781 ctactcttac agatttacca aaattaaaaa ttgttatgga gaacttaaac atgaaaataa
    15841 acaaaagtga aatagcgaga cacatgggtg ttgatagaag aacagttgat aaatatttaa
    15901 atggctttga gccaaccaaa aagagaaatc gtcagtctat tattgacaag tatta
//
LOCUS       DAKPJH010000058        15805 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.058, whole genome shotgun sequence.
ACCESSION   DAKPJH010000058 DAKPJH010000000
VERSION     DAKPJH010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15805
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.058"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..346
                     /locus_tag="OY092_001599"
     CDS             <1..346
                     /locus_tag="OY092_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076543.1"
                     /translation="ILPRATKISILFAVAFFIINYIGMEKPDILYLVGRTIIATLVFI
                     LICLTLFTIINSPERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIW
                     ELIEKNKGGRSS"
     gene            343..528
                     /locus_tag="OY092_001600"
     CDS             343..528
                     /locus_tag="OY092_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076544.1"
                     /translation="MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGI
                     DIILIVLIIVTLLLKYM"
     gene            complement(624..815)
                     /locus_tag="OY092_001601"
     CDS             complement(624..815)
                     /locus_tag="OY092_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076545.1"
                     /translation="MMGYIILFFLAGPVILGVGNLVIGPIFNKQTPFHVQVRSFVVGS
                     MIYLILATIDYFLLLQGKL"
     gene            complement(826..1461)
                     /locus_tag="OY092_001602"
     CDS             complement(826..1461)
                     /locus_tag="OY092_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1076546.1"
                     /translation="MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSS
                     IGGAATDLHDHLIKAIGSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIA
                     TSSVKAEIMPTFKALGLDDYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIE
                     DSVNGATAAIAAGLDVIVNTNKMTSAQDFSNVDYVAKDIDYDQIVARFFTK"
     gene            complement(1536..2453)
                     /locus_tag="OY092_001603"
     CDS             complement(1536..2453)
                     /locus_tag="OY092_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HCX1076547.1"
                     /translation="MFQKLSIFATKSFLVWMLVAAVIGFIFPQHVATLGKWVPYLLGI
                     VMLGMGLTITPNDFKMVFKAPRAVIIGVCLQFSIMPTLAFIIAKSFHLPPDIAVGVIL
                     VGCCPGGTSSNVMSYLAKANVALSVSITTVSTLLAPFVTPALIYLFANEWLEVSFLSM
                     LWSVVQVVLIPIALGIVLQIINRKIAEKASTALPIISVVAISLILAIVVGGSKHQILT
                     TGLLIFLVVILHNVLGYTIGYWLARLLKLDRQDQKAVSIEVGMQNSGLAVSLAALHFN
                     PIAAVPGAVFSFIHNITGPILAKYWSKKL"
     gene            2721..3251
                     /locus_tag="OY092_001604"
     CDS             2721..3251
                     /locus_tag="OY092_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076548.1"
                     /translation="MLIDKFETYIINIAGLNDRTTRKKLSKLCKSVQFCDALQFSINK
                     QFNQYVLEISLPKQQLPYFISFLSFHQYSIFQVLSPKKINELLDSDNLYQSAKRFDIN
                     IDGLQDAFIKDKVIDIMNMFQNHTDITYTLNKSHAHIICTPEIFAKLLHTIATRNIDI
                     LSANYRSSSMSKARIS"
     gene            complement(3317..4921)
                     /locus_tag="OY092_001605"
     CDS             complement(3317..4921)
                     /locus_tag="OY092_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCX1076549.1"
                     /translation="MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQH
                     TFWFKFWSVIESGGWVIFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINA
                     ILTQWPHTFGANLEKGVENVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRL
                     PEMVGVFQGLTFVVTISFFVMLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYH
                     FLERVLIPTGLHHFIYAPIEVGPVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFML
                     QGNGKVFGCLGIALAMYATTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPY
                     LFVLHAVLAASMDTLMYAFGVVGNMGGGLLDFISTNWLPLGKEHWGTYVAQVIIGLIF
                     VAIYFFLFRFLILKFDIPLPGRKKTEEEVKLFSKQDYKNKKGDSVDSKRASTGNEYED
                     KAAYYLDGLGGKENIKDVTNCTTRLRLTVYDESKVADTEYFTHQQMAHGLVKSGKSIQ
                     VVVGMTVPQVREAFEQMVEDQSSEDK"
     gene            5251..6015
                     /locus_tag="OY092_001606"
     CDS             5251..6015
                     /locus_tag="OY092_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCX1076550.1"
                     /translation="MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFT
                     HASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERV
                     DYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
                     EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTF
                     YLTDGTDYSSFISYHIFFETLVRKYNEYLLHNDISN"
     gene            complement(6073..6579)
                     /locus_tag="OY092_001607"
     CDS             complement(6073..6579)
                     /locus_tag="OY092_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HCX1076551.1"
                     /translation="MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSA
                     RTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDV
                     IEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYH
                     VIETSTQQ"
     gene            complement(6746..8059)
                     /locus_tag="OY092_001608"
     CDS             complement(6746..8059)
                     /locus_tag="OY092_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HCX1076552.1"
                     /translation="MEVHKKSNAWALFPLLLFVALFLGVGIITGDFTSMPLNVAITIT
                     VIVALLMNRKESFAKKVEVFTKGAGHSNIILMMLIFILAGAFSNTAEKMGGVKSTVNL
                     GLSLIPENLIIVGLFVICMFVSISMGTSVGTVAAIAPVGYGFAQATDVPTALAMATVV
                     GGAMFGDNLSMISDTTIAAVRTQHTKMKDKFRVNFKIVLPGAILTIIILYFLTNGISL
                     NHAKNYDYNLIKVVPYILVLVLALLGVNVIIVLIGGTLLAGIIGLIDGSFGWMGLLDA
                     VSKGIISMEDIAMIALLIGGLVGIIQHNGGIEWLLQFVRSKVKSKRGAELGIASLVSV
                     ADIATANNTISIIMSGPLAKNIADEYDVDSRKSASILDIFGGCFQGLLPYSPQVISAA
                     GVAGISPLMLFPYSIYPILLGVCGLVAILFNFPKLKKNTSQEMKH"
     regulatory      complement(8136..8231)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(8284..8856)
                     /locus_tag="OY092_001609"
     CDS             complement(8284..8856)
                     /locus_tag="OY092_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076553.1"
                     /translation="MALIVSRAILFLILVLAFGIATVFPEQKLPVYILFTLFVVVAIV
                     SNVWLTHQNVKKHIIKFDKRVAYFLGVLSGVFYIGIVIYGSTIIGYYNFISFIIFAIS
                     IVLVQILENILGINFKNTLPSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLK
                     WWLLLVISIIVLIIITVAMIVYEKYYTTPD"
     gene            complement(9343..10224)
                     /locus_tag="OY092_001610"
     CDS             complement(9343..10224)
                     /locus_tag="OY092_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1076554.1"
                     /translation="MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQ
                     RLEGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAV
                     LIPGDIRDEQFNYDLVEHAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNV
                     YPLFWTVQKALEYLKPGASITTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGP
                     KGIRVNCVAPGPFWSPLQISGGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEES
                     SYTTGQVFGVSGGVQID"
     gene            complement(10333..11454)
                     /locus_tag="OY092_001611"
     CDS             complement(10333..11454)
                     /locus_tag="OY092_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 peptidase aminoacylase family protein"
                     /protein_id="HCX1076555.1"
                     /translation="MGLKDQAVAWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILD
                     LPLATGLVAEVGQGPSCIAVRADIDALPIQELVEQDFKSKNEGVMHACGHDIHMASIL
                     ATAVKLKEIEGTLTGRVKFIFQPAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVG
                     TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAF
                     DEAVVTIGQISCGNTWNVIADHAYVQGTVRSFDPVVRKLVETRLQNIADGLAQAYNMK
                     INLNYTHLPGAVMNDEVLTHKAIAVAQHVGYKMEMMEQPLTIGEDFSGYSQHFPSVFA
                     LIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE"
     gene            complement(11729..12967)
                     /locus_tag="OY092_001612"
     CDS             complement(11729..12967)
                     /locus_tag="OY092_001612"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HCX1076556.1"
                     /translation="MNDLIINHIAELILPKSTDKPLKGKELDELNVVKNGTVVIKDGK
                     IVYAGTHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEIL
                     EMGGGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLK
                     VSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETG
                     VFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASSDKGKEK
                     LRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAI
                     AALKLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHFGINH
                     AEKVIKNGKVIVDNTLSFKA"
     gene            complement(12967..14628)
                     /gene="hutU"
                     /locus_tag="OY092_001613"
     CDS             complement(12967..14628)
                     /gene="hutU"
                     /locus_tag="OY092_001613"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HCX1076557.1"
                     /translation="MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVY
                     GGIGKAARNWEAFEAIEKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVP
                     EWANWDHFNELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGT
                     VTLTAGLGGMGGAQPLAITMNHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLA
                     EEAKERGEGLSIGLVGNAVDIHQAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEA
                     KVLREKDPKKYVELSQASMAKHVELMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDF
                     PGFVPAYIRPLFCEGKGPFRFAALSGDPKDIERADEEMRKLFPENEKLLRWLDLAEEK
                     ISYQGLPSRIAWLGYGERAKMGLALNRLVRDGEISAPIVIGRDHLDAGSVASPNRETE
                     SMKDGSDAVGDWAVLNALINTAAGGSWISFHHGGGVGMGYSLHAGMVVVADGSERAER
                     RLERVLTTDPGMGVARHVDAGYDIAIQTAKEKGIHIPMIDKAGDK"
     gene            14788..15672
                     /locus_tag="OY092_001614"
     CDS             14788..15672
                     /locus_tag="OY092_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1076558.1"
                     /translation="MKIIQLEYFLAIVKYNSFTKAAQFLHISQPSLTATIKKMEADLG
                     YDLFTRSTKDIKITEKGIQFYRYASELVQQYRSTMEKMYDLSVTSEPRIKIGTLESTN
                     QWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPL
                     YEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETD
                     RFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQV
                     HTFVQQCQDYLYGLLEAL"
BASE COUNT         5165 a         3181 c         2229 g         5230 t
ORIGIN      
        1 aatactgcca cgtgctacaa aaatatcgat actctttgct gtagcatttt tcatcataaa
       61 ttatatcggt atggaaaaac ctgacatcct atatttagtt ggaagaacta ttattgcaac
      121 acttgttttc atactcattt gtcttacatt atttactatt attaattctc cagagcgcaa
      181 gattaaactc ggtacgactt taccgattgc attaattatt ggtatcattt tcggcgccat
      241 atttttaacg gtacaaatcg gtgtcatcac tgggttaatc atcggtgtga ttgctacgtt
      301 tatttgggaa ttgattgaaa aaaataaagg aggtcgttca tcatgacaac agcattaatt
      361 ggtgtaattg tattaatctt actaattatt agctttgtgc caaactaccg tgctatgaaa
      421 tcagcaaaag aacaaggaag taatgcaaca agagctacaa ttatggtagg catagatatt
      481 atcttaattg tacttatcat cgtgacgtta ttattaaaat atatgtaact atttaaacca
      541 ccctatctca tacataaaca tgaacgttct accatttcac atacatatgg tcgtccattt
      601 aatgaggtaa ggtggttttc tcgttaaagt ttaccttgta atagtaaaaa atagtcaatt
      661 gttgcgagta ttaagtaaat cattgaacca acaacaaaag atcttacttg cacgtgaaat
      721 ggtgtctgtt tgttaaatat aggaccaatc accaaatttc caacgcctaa aattactgga
      781 ccagctagaa aaaacaatat aatgtaaccc atcatgatac gcctcctatt tcgtaaagaa
      841 acgcgctaca atttgatcgt aatcaatatc ttttgctaca taatctacat tagaaaagtc
      901 ctgtgcgctt gtcattttat tcgtattaac aataacatct aatccagctg caatcgcggc
      961 tgttgcacca tttacagaat cttcaatagc caaacattgt gtcggcatat aatttaattg
     1021 ttgtactgca gataaatata attcagggtc aggtttaact tgttcaacat cttctctacc
     1081 aacaactacc tctatataat cgtctagacc taatgcttta aaggtaggca ttatttccgc
     1141 tttcacacta cttgtggcaa tcgccatagg aatgtgacgt tgctttaaaa atgccatcaa
     1201 tgatttaatc gtatcaatca tcggtaatgt tgtactagta agatgatgtt cttcataaag
     1261 tttatcttta ttttccgaac caatcgcttt aattaaatgg tcatgcaaat ctgtagctgc
     1321 tcctccaata gaagaacgat aaaaatcaat gcttatagga tcggcattat gcatctctaa
     1381 atgtttatta ataacattaa ataaatgttg ttccgtatct attattgttc catcgaaatc
     1441 aaatataact gctctataca tatatttact cctctatttt ttctctttat caaagcttaa
     1501 catagtccga tgaccacttc attctattag tgcaattata acttttttga ccaatacttt
     1561 gctaaaatag gccctgttat attatgaatg aaactaaaca ctgcgcctgg tactgctgca
     1621 attggattaa aatgcaatgc tgctaatgac acagctaaac cagagttctg cattccaact
     1681 tcaatactga ctgctttttg atcttgtcga tctaatttta aaagacgagc taaccaatat
     1741 ccaatcgtat accctaatac gttatgtaaa ataactacta aaaatattaa taatcctgta
     1801 gttaagattt ggtgcttact gccacctaca actattgcta aaattaatga aatagcaaca
     1861 actgatataa tcggcaaagc tgtagaagct ttttcagcaa ttttacgatt aataatttgc
     1921 aaaacaatac ctaaagcaat tggaattaat acaacttgaa caactgacca caacatactc
     1981 aggaaagata cttccaacca ttcatttgca aatagatata ttaacgcagg tgtaacgaat
     2041 ggcgctagca acgtagagac cgtcgtaata gaaacagaaa gtgctacgtt agctttggct
     2101 aaataactca ttacattact tgatgtccca cccggacaac atccaactaa tattacgcca
     2161 acagcaatat caggtggtaa atgaaaagac tttgcaatta taaatgctaa tgtgggcata
     2221 atactgaatt gtagacagac accaataatt actgctctag gtgctttaaa gaccattttg
     2281 aaatcattag gtgtaattgt taatcccata cctaacataa caataccaag taaataaggt
     2341 acccatttac ctaatgtcgc aacatgttgt gggaaaataa atccaataac agctgctact
     2401 aacatccata ccaaaaaact cttcgtggca aatatactca atttttgaaa cattgttaac
     2461 acatcctcgt cgataatatt gaaaaatatt accataagac cagtaaggtt acaattactt
     2521 ttctgaaaat taagattatt tagccattct cttcttattg caaatatttt atcactgata
     2581 aacaattatt ttaaacttca ttcaaaagtc ttagtgaata aagaaaaaaa gcgtggtaaa
     2641 atcaacttga acaaaattaa gtcaccttta taaatattaa acgtgtattt aatgccatgt
     2701 attcctcggg aggtcctcac atgttaattg ataaattcga aacatacatc atcaacatcg
     2761 ccggtttaaa tgaccgtact actagaaaaa aattaagtaa gttatgcaaa agtgtacaat
     2821 tttgtgatgc gttgcaattc tcaataaaca aacagtttaa tcagtatgta ttagaaatta
     2881 gcttaccaaa gcaacaactt ccatacttca tttcattttt aagttttcat cagtatagta
     2941 ttttccaagt actttcacca aagaaaataa atgaattact tgattctgat aatttatatc
     3001 aatctgcaaa gcgtttcgat atcaatattg atggcttgca agatgctttc attaaagaca
     3061 aagtcatcga tattatgaat atgttccaaa atcacactga tatcacttat acgttgaata
     3121 agtctcatgc acatattata tgtacgccag aaatatttgc taaattgtta catacgattg
     3181 caactagaaa tatcgacatt ctatctgcca attatagatc gtcatctatg agcaaagctc
     3241 gtatatcata acaaaagaca catctatacg atgatcattt acaatgattg cgtatagtga
     3301 tgtgtctttt tttatattat ttatcttcgg acgattgatc ctcaaccatt tgttcaaatg
     3361 cttcacgaac ttgtggtact gtcataccta ctacaacttg gatactctta ccactcttta
     3421 ctaatccgtg tgccatttgt tgatgcgtga aatattccgt atccgcaact ttactttcat
     3481 cataaacagt taagcgtaat cttgttgtac agttagtaac atctttgata ttttctttgc
     3541 cgcctaaacc gtcgaggtaa tacgcagctt tgtcttcgta ttcattacct gttgaagcac
     3601 gtttagaatc tacgctatca ccttttttat ttttgtaatc ttgcttagaa aataatttaa
     3661 cttcctcttc tgttttctta cgtccaggta atggaatatc aaatttcaaa attaagaatc
     3721 tgaataagaa gaagtaaatc gctacaaata tcagaccgat aataacttgt gcaacataag
     3781 taccccaatg ttctttacct aatggcaacc agtttgttga aataaagtct aacaagccac
     3841 cacccatgtt acctacaaca ccaaatgcgt acattaaagt atccattgat gctgctaaaa
     3901 ctgcgtgtaa aacaaataag tatggtgcga tgaataagaa tgtaaattct aatggctcag
     3961 taatacctac aacgactgct gttaatgttg caggaataag taatgctgct acttttttac
     4021 gattttcttt aggtgtcgta gcatacattg ctaaagcaat acctaaacat ccaaatactt
     4081 tcccatttcc ttgaagcata aagccataag ggaattgctc ttttaatggc ttagtactct
     4141 tagcaaactc atttaaatgt tgtaaccatt cagctttcaa gccgtgattg actactactg
     4201 gtccaacttc aattggtgca taaataaagt gatgtaatcc tgttggtatt aatacacgtt
     4261 ctaagaagtg atacaaccat acaccgatat agcctgaagc aatgataaag tgttgcattg
     4321 aaccaatacc gtgctgaaca gttggccaaa taacacaagt aattgctgct aatggtaaca
     4381 tcacaaaaaa tgaaattgta accacaaatg ttaaaccttg gaatacacca accatttctg
     4441 gtaatcgttt actatagtat ctattgtgaa tccaagtaat aatagctgaa ataataatac
     4501 cacctagaat attcgtatcc aatgtggcaa tacctgcaat tgattttaaa ccaggtacat
     4561 tttcaacgcc tttttctaaa tttgcgccaa acgtatgtgg ccattgcgtt aaaatagcat
     4621 ttataaatgt attaaacatt aagtaaccca tcaatgctgc aagtgctgca tgacctggtg
     4681 cttttttagc taaagaaagt ggtaaaccta caacaaatac aacttccata tgcgtaaaaa
     4741 taacccagcc accagattct atcactgacc aaaatttaaa ccaaaacgta tgttgatctg
     4801 ctaaactccc catgattgta ggatttttaa ataatgtcgc aaagccaagc actatcccaa
     4861 agaaagcgaa cattaatact ggtacaatca ttgcactacc gaaacgcttt atcgcattca
     4921 tcttctattc cctccatatc atctttccta acaatacatc taattagatt catttataaa
     4981 tagatgtctt actatttaaa tataatatat agtaaacgct tacacaccta caacgacatt
     5041 gacgtatttt gaaagtattt tgtataatca gattatcttt tcatatagtg aaaatttttt
     5101 cacaagcatg tcaagaatat gcttgatttt aaaatatgta agtactttag ccatttataa
     5161 ccttatatac aatcaagaat taaattttaa aaatttcacc ttttaatgta aaaaccatat
     5221 atcacaaatt tatttccaag gaggttgaat atgtttttag acgaacacat taatcgaaac
     5281 tttgataaac ttaatgacaa tgatttacat atcgctcact ttatcaatac acatatagat
     5341 gaatgtaaaa atatgaaaat acaagattta gcgcaattca cacatgcctc gaatgcaacc
     5401 attcacagat ttacacgcaa attaggtttt gacggttata gcgattttaa atcgtacctt
     5461 aaatttgaaa gtaataagac acaccaatta ccatctaact ctatcgatag tttcaaacaa
     5521 gaaatcgata gtacattcag ttatttagaa cgcgttgatt accagcttct tactgaaaaa
     5581 atgcatacag cttcaacaat atatttgtat ggtacagggc gtgcacagtt aaacgttgct
     5641 tcagaggcac agcgtatatt gttaacgtta cataatcatg tcattgtact tcatgatgaa
     5701 catgaactta aaatgatttt gaataagagt gaacctaatg atttattctt tattatttca
     5761 ttatcaggtg aaacacatga attattagaa gtaacaaact tgcttcaact tagacaaaaa
     5821 tactttattt ctgttactac aatgaaagat aatacccttg ctcaaaaagc aaattacaac
     5881 gtctatgtat ccagtaacac attctactta actgatggta cagactattc tagcttcatc
     5941 agttatcata tattctttga aacacttgta agaaaatata atgagtattt actacataat
     6001 gatatttcaa attagaaaaa aggaagttat gatttaatgg ccttgagcct atcataactt
     6061 ccttttatca ttttattgtt gtgttgatgt ttcgataacg tggtacatct tatcaaacat
     6121 caattcgaaa ccatgcacca tggcatcatg atattctttt ttcttttgct tgtattctaa
     6181 attagtaaat cgtctttctt tttcaactaa tgaacgataa taaaatagca tttgggtgcc
     6241 acctgtttca cgttcaaaaa attctacctc aatgacatct tgtgtttcac ttagtccagg
     6301 cataccgata gtcatcttaa cgtattcatc cataactaaa gattcataaa tgccttcaat
     6361 cacatttact ttgccattac gttgttgatc tacaatacga tatttaccgc cttctttaac
     6421 gtccgcttca atctctttat tcgttctggc tgatgtcata aaccattgtt tcaacaaatc
     6481 tttctttgtc caagcttcgt atactaactc tggagaaaat ttataaagct tttcaatttc
     6541 aacttcgaca tgttcattct ctacattaaa ttttgccact gttgtccacc cactttcgct
     6601 cttactttta ttttaacgta tttttgctca gttccaaaca tagatgatca tcatttttaa
     6661 aagattagcg ttatacggtg agtacaacat gatctgttaa tataacaagc caccttactt
     6721 ggctacatcg atatattgtt aagcattaat gtttcatttc ttgactagtg ttctttttta
     6781 gctttggaaa attaaataaa atcgcaacaa gtccgcatac acctaataat ataggataaa
     6841 tgctgtatgg gaataacatt aacggtgaaa taccagctac accagccgct gaaatgactt
     6901 gcgggctata tggtaataaa ccttggaagc agcctccaaa tatatcaaga atacttgctg
     6961 atttccttga atctacatca tattcatctg caatattttt agctaaagga cctgacataa
     7021 taatagagat ggtgttattt gccgtggcaa tatctgcgac acttaccaaa ctagcaattc
     7081 ctaattctgc gccacgcttt gatttcactt tagagcgaac aaattgcaac aaccattcaa
     7141 taccaccatt gtgttgaata atacccacta aaccaccaat tagcaacgca atcatagcaa
     7201 tatcttccat gcttataata cctttggaca ctgcatctag tagccccatc caaccgaatg
     7261 aaccatctat gagaccaatg attccggcta ataatgttcc gccaatcaat acgataatga
     7321 catttacacc taataatgct aataccaata ctaaaatata cggtacaact ttaattagat
     7381 tataatcata gtttttagca tgatttaaag aaatgccatt cgttaagaaa tacagaataa
     7441 taatcgttaa aatagcacct ggcaatacaa ttttaaagtt tactctgaat ttatctttca
     7501 ttttcgtatg ttgtgttcta accgcagcaa ttgttgtatc tgaaatcatt gatagattat
     7561 cgccgaacat tgcacctcca acaactgtag ccattgctag cgcagttggt acatctgtcg
     7621 cttgtgcaaa tccgtaacca acaggtgcta ttgcagcaac agtccctact gacgttccca
     7681 tagatataga aacaaacata caaatcacaa acaatcctac aataattaaa ttttccggga
     7741 ttaatgatag tcctaaatta actgtcgact ttacgccacc cattttttca gctgtatttg
     7801 aaaatgcacc tgctaaaata aaaatcaaca tcattaaaat aatgtttgaa tggcctgcac
     7861 ctttcgtgaa gacctcaact tttttagcaa atgattcttt tcgattcatt aataacgcca
     7921 caattaccgt tatcgtaatt gcaacattta atggcattga agtaaaatca cctgtgataa
     7981 tacctacgcc taaaaacaac gccacaaata ataacaaggg gaataatgcc caagcattgc
     8041 tctttttatg tacttccatc ctttttacct gctttccaat taaaaatacc tctttctcac
     8101 aaacgatgaa gaaagaggtt ttcatgtgct ttacctgctt atcttcaaac cattacggtt
     8161 actggaattg gcacattcga gatgttgccg aggcttcata gggccagtcc ctccacctct
     8221 ctagataagt gatgcttatt tacgtttacg ttacaagata atccttagta cgtcaatcat
     8281 aaattaatca ggagtcgtat aatatttttc ataaacaatc attgctactg taataataat
     8341 caaaacaata atgctaataa caagtaaaag ccaccattta agcattaatg caataaaaat
     8401 gaacacgata gacacactta ctaatattaa tgaaatgact ttaaattgct gaacacgttg
     8461 cttggagatg actttcaact gtttgtttga tggaagcgta tttttaaaat taatacccag
     8521 tatattttct aatatttgaa ccaatacgat acttattgca aatataataa atgatataaa
     8581 attatagtaa cctataatag ttgatccata aataacgatt ccaatgtaga atactcctga
     8641 gagcacaccc aaaaagtaag caacacgttt gtcaaactta atgatatgct ttttaacgtt
     8701 ttgatgtgta agccaaacat tcgaaacaat cgcaaccact acaaacagtg tgaataatat
     8761 ataaactggc aacttttgtt caggaaaaac agtcgctatt ccaaaagcta atactaaaat
     8821 caaaaataat atagctctag atactattaa tgccataata acaacccctt tgtttaatat
     8881 cgagtttgca aatttacgtt tatcagtatt tctatgatca gtacttctac gggcagcgtt
     8941 tctatgtaat tcacatcatc ttaacatata aatacttcgc tatataattg aaaacatatc
     9001 ctattattct ttgtccgttc tgacgtttaa tatctaacct taggcatttc aattgttaat
     9061 aaatttaact ttcttccact aaccgtccct aaacccaatc ccgcaacagt ttttaacttt
     9121 ttcgttgttg tcctgacatc ctcattaaga aagtttattc tgcttaaaac ttataatcca
     9181 caccctgagc aaacgctctt tatgacaggg tattaaaata agccgataaa gatacacacc
     9241 tttaccgact atttaaaata cacttcacta attcatttta atttacttga ttgaagtagc
     9301 taaattaata ttattttgtt caattaaacg cttcatacaa acctaatcta tttgcactcc
     9361 accgctaaca ccgaacactt gtccagttgt ataacttgat tcttctgacg ctaatagcac
     9421 ataagttcca cataactcaa caggttgacc tgcacgacct aaaggtgttt tttgaccaaa
     9481 tgttgggatt ttactttgag gttgtccacc agaaatttgt aatggtgacc agaatggacc
     9541 aggcgctaca cagttcactc taattccttt tggtcctaat tcttctgaaa aacttttagt
     9601 taatgaaata attgctgctt ttgaagcggc ataatcatga agaataggac taggattata
     9661 gccttgtaca gatgatgtcg ttgtaattga cgcacccggt tttaaatatt ccaatgcttt
     9721 ttgaactgtc caaaatagcg gatagacatt cgtttcaaat gtttctgtaa atgcctcagt
     9781 tgtaaatcca tgaatatcat catgatactg ttgatgtcca gcaactaaag taacattatc
     9841 taagccacct aattgttgat atgcatgttc aacaaggtca tagttgaact gctcatctct
     9901 tatatcacca ggaattaaca ctgccttttg accactttct tcaatcactt ggcgtacttc
     9961 ttgtgcatct tgttcttcac tcggaagata gttaatcgct acatctgcac cttctttagc
    10021 atacgcaatc gctgctgcac gccctattgc tgagtcacca cccgtaacta acattttata
    10081 gccttctaag cgttgatgac cttggtaaga cgtttcgcca caatcaggtg ctggcgtcat
    10141 ttcagattgt aaacccggta cctcttgttc ttgtttttca taatctgttg ttttaaattt
    10201 tgttctagga tcttgagctg ccatttttaa catctcctta ttcgcttaat ggttattatt
    10261 tacccaaact tcccaggaac ttaatcatga ttacgctaaa aattactttc ttctttaaaa
    10321 aacaagctcg aattactcat gcaatagtct ctttacaaat tcaacaaaat actcaggtac
    10381 tttttccaga atcctttcat ccggtttata ttgaggatga tgtaaatcat attcactatg
    10441 agaaccaatt aacgcaaata cactaggaaa atgttgacta taacctgaaa aatcttctcc
    10501 aatcgtaagc ggctgttcca tcatttccat cttatatcca acatgttggg ctactgctat
    10561 tgctttatgc gtcaatacct catcattcat cacagcacca ggtaaatgtg tataattcaa
    10621 attaattttc atattatatg cttgagctaa cccgtccgca atattttgta atcgtgtttc
    10681 tacaagcttt cgcaccacag gatcaaaact acgtactgtg ccttgtacat atgcatggtc
    10741 agcaatgaca ttccaagtat taccacatga tatttgccca atggttacta ccgcttcatc
    10801 aaacgcagat agatttctac taactatgga ttgaatacta ttaatcaatt gcgccaacac
    10861 aataactgga tcgttgcatt gttctggctt tgcagcatga ccacccacgc ctttaatatg
    10921 aaactcaaaa cgatctactg ctgatgtaat tgcccctgtt ttgattgcaa atgtacctac
    10981 cgaacgcgat gggtcattat gaaaacccaa tactgcttgt acatctttta atgcatgtgt
    11041 ttcaataatt ttaaaagcgc catgtcctag ttcttctgct ggttgaaaaa tgaatttaac
    11101 acgcccagta agagtgccct caatttcttt taactttaca gctgtagcca aaatactagc
    11161 catgtgaata tcatgaccac acgcatgcat cacaccttca tttttagatt taaaatcctg
    11221 ttcaacaagc tcttgaatcg gtaaagcatc aatgtcagcc cgaacagcta tacaactcgg
    11281 tccttgtccc acttcagcaa caagcccagt cgcaagcggt aagtctaata ttctaatatg
    11341 atgttctgtt aaaatatctt taattttttg cgttgtctta aattctttat cggatagttc
    11401 tggaaattga tgaaaatacc ttctccaggc aacagcttga tcttttaatc ccatcggtca
    11461 ttccccttcc ttaagtcaat gatatgttgt ctaccctacg atgatcatct ttaactatta
    11521 aacgatgatt tcacaacaat gtactcttgt taattacttt cgctaatgat agacaattgt
    11581 ttaataatat cgtaacacta ttgtcaaact attctaactt ttataattaa gaacctatac
    11641 aaaaacgtgc tctcgaatta acttgttttt acaaatcaca aaaagctcta aacattagtg
    11701 taaaccaacg cttagagctt taattacttt atgctttaaa agataatgtg ttatcaacga
    11761 tgaccttacc atttttaata actttttctg cgtgattgat accaaaatga tatggaatat
    11821 attcatgatt tggtgcatcc caaattacta aattagcctt atcacctgtg ttaattgtac
    11881 ccgcgttaat gtctattgct ttagcagcat tgaccgtaac agcattccaa acttcattag
    11941 gtgatagctt taatttcaag gctgcaatcg ccataacaag ttgtaagttg tttgtgacac
    12001 tactaccagg gttataatca gttgctaatg caatcgcacc gttattgtca agcatgcctc
    12061 ttgcatctgc ataatcttct ttacctaaat agaacgtcgt tgcaggtaag aggacagcta
    12121 cagtatcact atttcgcaac ttttcttttc ctttatcact agaagctact aagtggtctg
    12181 ctgatattgc ttgttcatca attgctaatt ccagtccgcc taacggatca atttcatccg
    12241 catgtatttt cactttaaaa cctgcttctt tggctttttg catataatgt tgcgattgtt
    12301 ctattgtaaa tacacctgtt tcacagaaaa tatccgcaaa gtctgcatat tgttttactt
    12361 ccggaagtaa cgcaatcatt tcttctaaaa atgcctcatt tgaacttgcc tctttaggta
    12421 cagcatgagg ccctaggaaa gtatgtttca tgtctaaatc atatttctca gctaaacgat
    12481 tagacacttt caattgcttc agttcatttt ctctatctaa tccataacca ctcttacttt
    12541 caactgcaag cacgccgtgt ttaatcatag taagcaaatc atgctctgct tttttaaaca
    12601 agtcatcttc ggatgtttct ctagtagcat taacggtaga taatatgcca ccacccattt
    12661 ctaatatttc aaggtaagac ttaccttgac gttttaatga catctcatgt tctcgagatc
    12721 caccaaatgt taaatgtgta tgtgcatcta ctaatgctgg ggacactacc ttcccactag
    12781 catcaatcgt ctcagtcgca tcgtagtcat ctgtatgtgt tccagcatat acaattttgc
    12841 catctttaat gacaactgta ccatttttca caacatttaa ttcatctaat tccttaccct
    12901 tcaaaggttt atctgttgat ttcggtaaaa ttaattctgc tatatgatta attattaaat
    12961 cattcattac ttatcacctg ctttatcaat cattggaata tgaatacctt tttctttagc
    13021 tgtttgaata gcgatgtcat agccagcatc aacatgtcgg gcaacaccca tacctggatc
    13081 agtcgtcaat acgcgttcca atcttctttc agcacgctct gatccatctg ctacaacaac
    13141 catacccgca tgaagtgaat atcccatgcc aacaccgcca ccgtgatgga atgaaatcca
    13201 tgaaccacct gcagctgtgt taatgagtgc attcaataca gcccaatcac caaccgcgtc
    13261 actaccatct ttcatacttt ctgtttcacg gttaggacta gcaactgaac cagcatctaa
    13321 atgatctcgt ccaataacaa ttggtgctga aatttcaccg tcacgtacaa gacgatttaa
    13381 agctaagccc attttcgctc gttctccata gcctaaccaa gcaatacgtg atggtagtcc
    13441 ttgatatgaa attttttctt cagctaaatc aagccatctt aataactttt cattttctgg
    13501 gaaaagtttg cgcatttctt catccgcacg ctcgatatct tttggatcac cactcaacgc
    13561 agcaaagcgg aatggccctt taccttcaca gaataatggt ctaatgtaag ctggtacaaa
    13621 gcctgggaag tcaaaagcat ttttcactcc gttattgaag gctacttgac gaatattgtt
    13681 accataatca aatgctacag cgccacgttt ttggaattca agcattaatt caacatgctt
    13741 tgccattgaa gcttgtgaca gttcaacata ttttttcgga tctttttcac gcaatacttt
    13801 cgcttcttct acagagtatc cttgtggcac atatccattt agcggatcat gtgcacttgt
    13861 ttggtcagta ataatgtcaa ttttaaatcc tttttctaga atcgcttgat ggatgtctac
    13921 agcatttcca actaacccga ttgataatcc ttctccacgt tctttcgcct cttctgctaa
    13981 ttttaatgct tcatctaaat cagctgtttt aacatcacag tatttcgtat caattcgctt
    14041 atcaacacgt gtttcatcaa catccacgca aattgctacc ccatgattca tagtaattgc
    14101 taacggttgc gcaccaccca taccacctaa acctgctgtc agtgtaacag tgcctgctaa
    14161 atctccatta aagtgttgat tacctagctc ggcaaatgtc tcataagtac cttgcacaat
    14221 accttgagaa ccaatatata tccaactacc ggctgtcatc tgtccataca tgattaaacc
    14281 ttttttatct aattcattaa aatgatccca gtttgcccat tcaggcacta atactgaatt
    14341 tgaaattaat acacgtggcg cttcttcatg tgttttaaat acagcaactg gctttcctga
    14401 ttgtactaac attgtctcat ctgattctaa ttctcgtaac gttttctcta ttgcttcaaa
    14461 agcttcccaa ttacgtgctg cttttccaat accaccataa acaactaaat cttctggtct
    14521 ttcagcaact tctgggtcta aattgttgta taacattcta agtactgctt cttgttccca
    14581 acctttacac tcaatactta aacctttttt tgcttgaatt tttctcataa aattcgctcc
    14641 tgttcttttt agaagttaat tccactaaat ttaaaacgct tacattatta tcttcaatat
    14701 tcattatagt atgttaaaat atagccaaca aatataaata aactaattat ccatagcttg
    14761 aatctataaa taaaaggagc aaaacacatg aaaattattc agttagaata tttcttggct
    14821 atcgtgaaat ataatagttt tactaaagct gcacaatttt tacatattag ccagccatct
    14881 ttaactgcta cgattaaaaa aatggaagca gatttaggtt atgacttatt tacacgttca
    14941 acaaaagaca tcaagattac cgaaaaagga atacagtttt atcgttatgc gagcgaatta
    15001 gttcaacaat atcgatccac gatggaaaaa atgtatgatt taagcgttac atcagaacca
    15061 aggataaaaa ttgggactct tgaatctacg aatcaatgga ttgcgaattt aattcgaaag
    15121 caccattccg actaccctga acagcaatat cgtttatatg aaatacatga caaacatcaa
    15181 tctatagagc aattactgaa ttttaatatt catttagcta taacaaatga aaaaataacc
    15241 cacgaagata taagatccat tcctttatat gaggaatctt acattttatt agcacctaaa
    15301 gaaacattta aaaatcaaaa ttgggtagat gttgaaaatt tgccactcat attgccaaac
    15361 aaaaattctc aagtgcgcaa acacttagat gactatttta atagaagaaa tattcgtcca
    15421 aatgtcgttg tagaaacaga tcgattcgaa tcagcagttg gatttgttca tctcggctta
    15481 ggttacgcta tcattccgag attttattac caatcatttc acacgtccaa tttagaatat
    15541 aaaaaaattc gaccaaactt aggccgaaaa atttatatca attatcataa aaagcgtaaa
    15601 cactccgaac aagtacatac attcgtacaa caatgccaag attatttata tggactttta
    15661 gaggctcttt aacttaagtt attagagcct cttatgcagt tgctcagtca actgtatacc
    15721 ttttgacttt aacttaagta attagagcct cttatgcagt tgctcagtca actgtatacc
    15781 ttttgccttt aacttaagta attag
//
LOCUS       DAKPJH010000059        15768 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.059, whole genome shotgun sequence.
ACCESSION   DAKPJH010000059 DAKPJH010000000
VERSION     DAKPJH010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15768
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.059"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            93..1463
                     /locus_tag="OY092_001615"
     CDS             93..1463
                     /locus_tag="OY092_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HCX1076559.1"
                     /translation="MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMI
                     LGYSVTDLVGFFAKGLDQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVV
                     IVCAMTALIGTIAQLDGAGAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMV
                     PWGGPMARVAAVLKAKSVNELWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERN
                     ELPQTQDIDVHKLVEVYERDQDVRFPVKGRARTQPWIKWVNTALTLAVILAMLMNIAP
                     PEFAFMIGVSLALIINFKSVDEQMERLRAHAPNGLMMAAVIIAAGMFLGVLNETGMLK
                     AIATNLIKVIPAEVGPYLHIIVGLLGVPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSV
                     STAYSMVIGNIIGTFVSPFSPALWLAIGLAEANMGTYIKYAFFWIWGFAIVMLVIAML
                     MGIVTI"
     gene            1709..3559
                     /gene="nrdD"
                     /locus_tag="OY092_001616"
     CDS             1709..3559
                     /gene="nrdD"
                     /locus_tag="OY092_001616"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HCX1076560.1"
                     /translation="MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKS
                     YALNHLLPKHVADAHQRGDIHFHDLDYHPFQPLTNCCLIDAKNMLHNGFEIGNANVTS
                     PKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
                     IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILN
                     TRIKGLGKDRTTAIFPKLVFSIKKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDK
                     LVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLPRMALESAGNMTKFW
                     EIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRAT
                     ISMGYIGLYETATVFYGPDWETSQEAKAFTLEILKEMKRYQTKWTELYDIWFSIYSTP
                     SESLTDRFCRLDQERFGDIKDITDKGYYQNSFHYDVRKDVTPFEKLDFEKDYPYYASG
                     GFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEATEKGFK
                     CPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE"
     gene            3556..4092
                     /gene="nrdG"
                     /locus_tag="OY092_001617"
     CDS             3556..4092
                     /gene="nrdG"
                     /locus_tag="OY092_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HCX1076561.1"
                     /translation="MTLLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCY
                     NKASQKFRYGEKYTDEILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARF
                     GNTKTIWVWTGFLYEYLANDCAERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRI
                     IDVQQSLSHARMIEYIVS"
     gene            4192..4302
                     /locus_tag="OY092_001618"
     CDS             4192..4302
                     /locus_tag="OY092_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076562.1"
                     /translation="MIEYDLTIILIPILKVAYPFFKKVERKKWYFSGKEV"
     gene            complement(4318..4479)
                     /locus_tag="OY092_001619"
     CDS             complement(4318..4479)
                     /locus_tag="OY092_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076563.1"
                     /translation="MAIIEYLYNFSRNKQNLNSAKTTVLSYDLTNLTNFTRMAFKNIY
                     TLLTNIYLL"
     gene            4611..6233
                     /locus_tag="OY092_001620"
     CDS             4611..6233
                     /locus_tag="OY092_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501390.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HCX1076564.1"
                     /translation="MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAI
                     SDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKASDKPEFNTFTWAAMLFCAGIGSD
                     ILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
                     FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIE
                     RLTGLDGKNMILRSAILLTITVIFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIG
                     PTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQDWTIFYWSWWLVYAP
                     FIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNT
                     HGTEATIIEVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRA
                     NRLFWAFALCLLPFSLMLVGGERALEVLKTASILASVPLIVIFIFMMISFLIILGRDR
                     IKLETRAEKLKEVERRSLRIVQVSEEEQDDNL"
     gene            complement(6403..6966)
                     /locus_tag="OY092_001621"
     CDS             complement(6403..6966)
                     /locus_tag="OY092_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GbsR/MarR family transcriptional regulator"
                     /protein_id="HCX1076565.1"
                     /translation="MTRSQNKQQQLEQAKDIVINSIGQTMDLYGTNRSVGNLYGTMVF
                     EGSMTLDEMRHQLQMSKPSMSAGVKKLQEFDIVKQQFTRGSRKQHFIAEKDFFIFFRN
                     FFTKKFQREIDINVEAVKDAQAIINPLLESSDLTEAETQEAQKIKAQLDHTHVYYEWL
                     EQLTEAIESGEIFKYFPIPEQPSDSEN"
     gene            complement(7055..7150)
                     /locus_tag="OY092_001622"
     CDS             complement(7055..7150)
                     /locus_tag="OY092_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076566.1"
                     /translation="MKNVSIYKTTKELSFVSSLDFYLTKHLTLML"
     gene            7219..8709
                     /gene="betB"
                     /locus_tag="OY092_001623"
     CDS             7219..8709
                     /gene="betB"
                     /locus_tag="OY092_001623"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HCX1076567.1"
                     /translation="MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGT
                     KEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTL
                     EESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPL
                     LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGD
                     VMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQ
                     ALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVIST
                     EHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVF
                     GPVVTVEGFETEQEAIQLANDSIYGLAGAVFSRDIGKAQRVANKLKLGTVWINDFHPY
                     FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK"
     gene            8970..10679
                     /gene="betA"
                     /locus_tag="OY092_001624"
     CDS             8970..10679
                     /gene="betA"
                     /locus_tag="OY092_001624"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HCX1076568.1"
                     /translation="MSNKNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDY
                     FWDLFIQMPAALMFPSGNKFYDWIYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQ
                     RGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPAT
                     NPLFQSFFDAGVEAGYHKTPDVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKN
                     LTVETRAFVTEIHYEGRRATGVTYKKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGD
                     SEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIF
                     TRKGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMY
                     SNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEI
                     SPGPEVQTDEEILDWVRRDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVV
                     DASAMPRTTNGNIHAPVLMLAEKAADIIRGRKPLEPQYIDYYKHGVHDENEGAIEVKP
                     YAK"
     gene            10956..11168
                     /locus_tag="OY092_001625"
     CDS             10956..11168
                     /locus_tag="OY092_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HCX1076569.1"
                     /translation="MSFYEYIQTFKDDKTPLGELAIWIKEDDSFPKQEKLTENILSYF
                     HQMSNIDHEFLEIVKRSLSLYDQLKS"
     gene            11448..11891
                     /locus_tag="OY092_001626"
     CDS             11448..11891
                     /locus_tag="OY092_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HCX1076570.1"
                     /translation="MNIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSL
                     CVLNHLYINEGQEETFEQKFLRRNKHLKNVDGFKALRFLRPRTAGRHYIIITLWENRK
                     AFYHWQNSAEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV"
     gene            12085..13683
                     /locus_tag="OY092_001627"
     CDS             12085..13683
                     /locus_tag="OY092_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HCX1076571.1"
                     /translation="MQKSALFAPEKYNIISEIEKYSHIPDKKAILYHNTEGEDISVTY
                     QQLIEQSNKVGNVLASHGLSKGDKVLIMMPRSIATYELYIAALKLGVAIIPCSEMLRT
                     KDLQYRITHGEINAVIALEPFTVEFEKIKGYDALTKFVIAGQKDGWISLEAEKENASN
                     KLEMADTTRDDTAILSYTSGTTGNPKAVTHCHGWGFAHLQMAPKHWLCINEDDLVWAT
                     AAPGWQKWVWSPFLSVLGSGATAFVFNGRFSPETYLELLQKYQINVLCCTPTEYRMMA
                     KLQNLNDYDLTHLHSAVSAGEPLNREVVEQFKKYFNLTVRDGYGQTESTLLIGFLKDT
                     PQRIGSMGKGIPGSSVTVVDDEGNSVPANTEGNIAVPLDLPALFKGYYKEPERTAKAQ
                     TGKYYITGDLAHVDDDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHPAVKECAVVA
                     KPHDIRGNIVKAFVILQDHTAGDDTLVKELQQFVKNEVAPYKYPREIEFVDDLPKTNS
                     GKIRRVELRDAEIEKWQQQKDSNQ"
     gene            complement(13743..14074)
                     /locus_tag="OY092_001628"
                     /pseudo
     CDS             complement(13743..14074)
                     /locus_tag="OY092_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501381.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            14370..>15768
                     /gene="mqo"
                     /locus_tag="OY092_001629"
     CDS             14370..>15768
                     /gene="mqo"
                     /locus_tag="OY092_001629"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HCX1076572.1"
                     /translation="MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPA
                     IESSNERNNAGTGHAALCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGS
                     IENPREFINPLPHISYVRGKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLM
                     MKGREDNPGIMAASKIDEGTDVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNG
                     QWEVTVKNRLTGEKFKQVTDYVFIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACT
                     NPQVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNL
                     DLFKSVKTYNITTLLAAAVKNLPLIKYSFDQVIMTKEGCMNHLRTFYPEARNEDWQLY
                     TAGKRVQVIKDTPEHGKGFIQFGTEVVNSQDHTVIALLGESPGASTSVSVALEVLERN
                     FPEYKTEWAPKIKKMI"
BASE COUNT         5447 a         2338 c         3070 g         4913 t
ORIGIN      
        1 taacttaaat ataaaaaatt atattaatta ttatatttaa gttaaagagg gggattatgt
       61 aaattgtatt aaaagtggag ggagaaaata atatgaatag tgataatatg tggttaacag
      121 taatggggct cattattatt atttcaattg taggtttact cattgccaaa aagataaatc
      181 cagttgtagg tatgacaatc ataccttgct taggggcaat gattttagga tatagtgtga
      241 cagatttggt tggatttttt gctaaaggat tagatcaagt catcaacgtt gttattatgt
      301 ttatctttgc cattattttc tttggcatca tgaatgatag tggtttattc aagccgcttg
      361 tcaaacgctt aatattaatg acacgaggca atgtcgtcat tgtctgtgca atgacagctt
      421 taattggcac aatagcccaa ttagatgggg ccggtgcggt aacatttttg ctttctattc
      481 ctgcattatt acctttatat aaagcgttaa atatgaataa atatttattg attttactat
      541 tagcattaag cgcggcgatt atgaacatgg taccttgggg aggtccaatg gctcgtgtag
      601 ctgcagtgtt aaaagccaaa agtgtcaatg aattatggta tggattaata cctattcaaa
      661 taataggttt cattcttgtt atgttatttg cggtatatct tggatttaaa gaacaaaaac
      721 gtatcaaaaa agcaatagag agaaatgaat taccgcaaac acaagatata gatgtacata
      781 aattagttga agtatatgaa cgagatcaag atgtaaggtt tcctgtaaaa ggacgtgcac
      841 gaacacaacc atggataaaa tgggtgaata cagctttaac tttagctgtt attctagcga
      901 tgttaatgaa tattgcgcca cctgaatttg cattcatgat aggtgtttca ttggcactta
      961 ttattaattt taaatcagtg gatgaacaaa tggagcgatt aagagcgcat gcgccgaatg
     1021 gattaatgat ggctgcagtg attattgcag caggtatgtt tttaggtgta ctaaatgaaa
     1081 ccggtatgct taaagcgatt gcgacgaatt taatcaaagt gattcctgca gaagtagggc
     1141 catacttgca tattattgta ggtttacttg gtgtaccatt agatttacta actagcacag
     1201 acgcttatta ttttgctgtg ttaccaatcg tcgaacaaac agcagggcaa tttggtgtac
     1261 cgtctgtatc aacagcttat tcaatggtca tagggaatat tataggtaca tttgtcagcc
     1321 cgttttcacc agccttatgg ttggcaattg gtttagcaga ggcaaacatg ggcacgtata
     1381 ttaagtatgc attcttttgg atttggggat tcgccatcgt gatgttagta attgcgatgt
     1441 tgatgggcat tgtgacgatt taagtatgaa aaaatagaaa ctatggtcac gttgcaaaat
     1501 gaaatgatgg tatgtaacta tgctagaaag acggaacgat tcgagaacaa ttttaaaaat
     1561 taatgaaata attgtgtaga aatatgaatt tcactaaatg ttaataactt tgtgacgttt
     1621 tagttaacag actaataaaa atttgaaaat actatatata gtggtataac gtaatgagta
     1681 gacacaatat ataggaagaa ggggtaaaat gaatcaaatc gaagaagcat taacgggttt
     1741 gatttctaaa gatcctgcta ttgttaacga aaatgccaac aaagatagtg atacattttc
     1801 aacaatgaga gatttaacag caggtatcgt ttctaaatct tacgcattaa atcatttatt
     1861 accaaagcac gttgcagatg cacatcaaag aggggacata cattttcacg acttagatta
     1921 tcatccattc caaccgttaa caaactgttg tttaatagat gctaaaaata tgctacataa
     1981 tggatttgaa ataggcaacg cgaatgtaac ttcaccaaaa tcaatacaaa ctgcatcagc
     2041 gcagcttgta caaattatag ccaatgtttc tagcagtcaa tatggtggct gtacggttga
     2101 ccgcgttgac gaattactta gtacatatgc acgacataat gaagaacaac ataggaatat
     2161 cgcaaagcaa tttgtcaaag aatctgaaat cgaccgttat gttgatcaac aagtcactaa
     2221 agacatcaat gatgcgattg aaagtttaga atatgaaatt aataccttat atacatctaa
     2281 tggacagaca ccttttgtaa cattaggatt cggcttaggt acagatcatt taagtcgcaa
     2341 aattcaacaa gctatcttaa atactcgtat caaaggctta ggaaaagacc gcacgacagc
     2401 gattttccca aaacttgtat tttcaattaa aaaaggaacc aactttagtc cgcaagatcc
     2461 gaactatgac attaaacaac tagcattaaa gtgttcaaca aaacgtatgt atccagatat
     2521 tttaaattat gacaaactcg tagaaatatt aggtgatttc aaagcgccaa tgggttgtcg
     2581 ttcattttta ccaagttgga aagatgcgga aggtcatttt gaaaataatg gtcgttgtaa
     2641 ccttggtgtt gtaacgctta atttacctag aatggcatta gaatctgctg gtaatatgac
     2701 aaaattctgg gaaatctttt atgaacgtat cgatgtgtta catgatgcat tactttatcg
     2761 tataaatcgt ttgaaagatg ctgtaccgaa taacgcaccg attttatata aaagtggcgc
     2821 atttaactat aaattaaaag aaacagatga tgttgctgag ttatttaaaa ataaacgtgc
     2881 aacgatttca atgggctata tagggttgta tgaaacagct actgttttct atggtccaga
     2941 ctgggaaaca tctcaagaag caaaagcatt tacgcttgaa attcttaaag aaatgaaacg
     3001 ttatcaaacg aaatggacag aattatatga catttggttc agtatttaca gtacgccgag
     3061 tgaatcgcta acggatcgtt tttgtcgttt agaccaagag agatttggag atattaaaga
     3121 cattacagat aaaggatatt accaaaactc tttccattat gatgtacgta aagatgttac
     3181 accttttgaa aagttagatt ttgaaaaaga ttatccttat tatgcgagtg gtggtttcat
     3241 tcactattgt gagtatccga aattgcaaca caatttgaaa gcactagaag cggtatggga
     3301 ctactcttat gacaaagttg gttacttagg tacaaatatt ccgattgatc attgttatga
     3361 atgtgattac gatggagatt ttgaagcaac tgaaaaagga tttaaatgcc cgaactgtgg
     3421 caatgataat cctaaaacag ttgatgtcgt taaacgaaca tgtggttact taggcaatcc
     3481 agttcaacgt ccagtaatta aaggccgtca taaagaaatt tgcgcacgag taaaacatat
     3541 gaaagcgcct aaagaatgac acttttagac attaaacaag gacaaggtta tattgctaaa
     3601 atagaatcaa atagctttgt tgacggtgaa ggagtaagat gcagtgttta tgtatcagga
     3661 tgtccattta attgtgttgg atgttacaac aaagcctcac aaaagttcag atatggcgag
     3721 aaatacactg atgaaatatt agcagaaata ttagatgact gcgatcatga ttatatatct
     3781 gggctaagtc tattaggtgg cgaaccattt tgtaatttgg atattacatt aaatcttgtc
     3841 aaagcatttc gagcacgttt tggaaataca aagacaattt gggtatggac tggattttta
     3901 tatgaatatt tagcaaatga ttgtgcagaa cgtcgagagt tattatcata cattgacgtt
     3961 ttagtagatg ggctatttat acaacactta ttcaaacctg atttaccata taaaggttct
     4021 ttaaatcaac gtattataga tgtacaacaa tcactctcgc atgcgcgtat gattgaatat
     4081 attgttagtt gaatatgtat tagaagtcaa ggtaacatgc gttgccttgg cttcttttta
     4141 ggttaggtac ataattgaaa gttaataaaa gcaatttttt agaaaaatat attgatagaa
     4201 tatgacctaa caatcatttt gataccaata ctaaaagttg catatccgtt ttttaaaaaa
     4261 gttgaaagaa aaaagtggta ttttagtggg aaggaagtct aactttttgg tagcgtttta
     4321 caataaataa atattcgtta ataacgtata aatattctta aatgccattc tagtaaaatt
     4381 tgttaaattc gttaaatcgt aacttaacac tgttgtttta gcgctattaa ggttttgttt
     4441 attacgggaa aaattatata aatattcaat aattgccaag tttcaaattg tatgaaattt
     4501 gcattattat taaatgttag ttattgtcaa ttttgtgaat caatataatt attacatttt
     4561 gagataaatc gaaacaggat tcataaaatt aataattagg gggagcacaa ttgaaaaaag
     4621 agaaagttat ggactggacg acctttatag ggacagtagc tgtacttctt tttgcagtta
     4681 tacctatgat ggcttttcca aaagcaagtg aagatatcat cactggtatt aatagtgcca
     4741 tttctgattc aattggttcg atatatttat ttatggggct ggcgattttt tgctttgtaa
     4801 tgtatatcgc atttggtaaa tatggtaatg tcacacttgg taaagcaagt gataaaccag
     4861 aatttaatac atttacatgg gctgcaatgc tgttttgtgc aggcataggc tctgatattt
     4921 tatactgggg cgttattgaa tgggcttttt actatcaagt tccaccaaat ggcgcgaaaa
     4981 gtatgagtga tgaagcactc caatatgcga cgcaatatgg tatgttccac tgggggccaa
     5041 ttgcttgggc tatttatgtt ctaccagcat taccaattgg ttatttagta tttgttaaaa
     5101 aacaaccggt gtataaaatt agtcaagctt gtcgtccgat tttaaaaggt caaacagata
     5161 aatttgtagg taaagttgta gatatcttat ttatctttgg attgctaggt ggtgcggcaa
     5221 catcactagc gttaggtgtg ccattaattt ctgcaggcat agaaagatta actggtttag
     5281 atggtaaaaa tatgatttta cgttcggcca ttttattaac aatcacggtt atatttgcca
     5341 ttagttcata tacaggattg aaaaaaggta ttcaaaagtt aagtgatatc aacgtttggc
     5401 tatcatttgt acttttagcc tttatattta ttattggacc gactgttttt attatggaaa
     5461 cgacagtgac agggttcgga aatatgttga gagatttttt ccatatggca acatggttag
     5521 aaccattcgg tggtattaaa ggtcgaaaag aaacgaattt cccacaagac tggacaatat
     5581 tctactggtc atggtggtta gtatatgcgc catttatcgg tttatttatc gctagaattt
     5641 caaaaggtcg acgccttaaa gaagtcgtgc taggaacaat tatttatgga acgcttggat
     5701 gcgtattatt ctttggtatt tttggtaact atgctgtgta tttacaaatt tctggacagt
     5761 ttaatgtaac acaatattta aatacacatg gtacagaggc aaccattatt gaagtggtgc
     5821 atcatttacc attcccatca ttgatgattg tactattctt agtatctgct ttcttattct
     5881 tagcaacaac atttgattcg ggttcatata ttttagcggc agcatctcag aaaaaagtgg
     5941 taggcgaacc attacgtgcc aatcgtttat tctgggcatt tgcattgtgc ttattgccat
     6001 tttcattgat gctagttggt ggcgaacgtg cattagaagt attgaaaact gcttcaatac
     6061 tggcaagtgt gccattaatt gttattttta ttttcatgat gatatcattt ttaatcattt
     6121 tagggcgcga tagaattaaa cttgaaacgc gtgctgaaaa attaaaagaa gttgaacgtc
     6181 gttcattgcg aatcgttcaa gtatcagaag aagaacaaga cgataattta taattaaata
     6241 aatagcacat aagactttga tttttaaaag taaataattg attgtcatat aaaacaaaaa
     6301 cggtaatttc tatttattga gatagaaatt accgtttatt tcgtggacct gttgcattgt
     6361 tttcatcatg cataatcatc attgtcgttg tttgagtcaa ttttaatttt cagaatcaga
     6421 aggttgttct ggaattggga aatatttgaa aatttcaccg ctttcaatcg cttcggttaa
     6481 ctgttctaac cattcgtaat aaacatgtgt atgatcaagc tgagctttaa ttttttgtgc
     6541 ctcttgtgtt tcagcttcag ttaaatcact gctttcaagt aatggattga taatagcttg
     6601 agcatctttt actgcttcga cattgatatc aatttcacgc tggaattttt tagtgaaaaa
     6661 gtttcggaaa aagatgaaaa agtctttctc ggcgataaaa tgttgtttgc ggcttcctct
     6721 cgtaaattgt tgtttaacaa tatcaaattc ctgcaatttc ttaacgccag cactcatact
     6781 tggtttgctc atttgcaatt gatgacgcat ttcatcaagc gtcatactgc cttcaaacac
     6841 catagtgcca tataagtttc ctacacttct attagtgcca tacaaatcca ttgtctgtcc
     6901 aattgaatta attacaatat cttttgcttg ttctaattgt tgctgtttgt tctgagaacg
     6961 agtcatcatt gcacctccgt acatcatttt ggtcacgtta aaataaatac taatacatta
     7021 taaaaccttt tctaaaaaaa gacattaaaa atatttaaag cattaaagtt aaatgtttcg
     7081 ttaaataaaa atctaacgaa cttacaaaac ttaattcttt agttgttttg taaattgaca
     7141 catttttcat ttctatgcta acataagttt gtaaaattcg ttaaataaaa atttaacaaa
     7201 cttaacggag gttgttgaat ggaactttta aaacatttat ctcagcgtca atatattgat
     7261 ggtgagtggg ttgaaagcgc gaataaaaat acaagagata ttatcaatcc ttacaatcaa
     7321 gaagtgatat ttacggtttc tgaagggaca aaagaggatg cagaacgtgc aatcttagct
     7381 gcaagacgtg cgtttgagtc tggtgaatgg tcgcaagaaa ctgctgaaac aagaggtaaa
     7441 aaagtacgtg ccatcgcgga caagattaaa gaacatcgcg aagcgttagc acgattagaa
     7501 acattagata ctggaaaaac gttagaagaa tcatatgcag atatggatga tattcataat
     7561 gtgtttatgt attttgctgg attagcagat aaagacggtg gcgaaatgat tgattcacca
     7621 attccagata cagaaagcaa aattgttaaa gaaccagtag gtgtagttac acaaattaca
     7681 ccttggaatt atccgttatt acaagcatca tggaaaattg cgcctgcgct tgctacgggt
     7741 tgttcactag ttatgaaacc aagtgaaatt acaccattaa caacaatacg tgtttttgaa
     7801 ttaatggaag aagttggttt ccctaaagga acaattaatc ttattctagg tgcaggttct
     7861 gaagttggtg acgtaatgtc aggtcataaa gaggttgacc ttgtatcatt tacaggtggc
     7921 attgagactg gtaagcatat tatgaaaaat gctgctaata atgttacgaa tattgccttg
     7981 gaacttggcg gtaaaaatcc aaacattatc tttgatgatg ctgattttga attggcggta
     8041 gaccaagcgt taaatggtgg atatttccat gcaggtcaag tttgttcagc aggatcaaga
     8101 atattagtac aaaacagtat taaagacaaa tttgagcaag cacttattga tcgcgtgaaa
     8161 aaaattaaat taggtaatgg ttttgatgct gatactgaaa tgggaccagt gatttcaaca
     8221 gaacatcgta ataagatcga atcttatatg gatgtagcta aagcagaagg cgcaacaatt
     8281 gctgttggtg gtaaacgtcc agatagagat gatttaaaag atggtctatt cttcgagcca
     8341 acagtcatta caaattgtga tacgtcaatg cgtattgtac aagaagaggt tttcggacct
     8401 gtcgttactg tagaaggctt tgaaactgaa caagaagcga ttcaattagc gaatgattct
     8461 atatatggtt tagcaggtgc tgtattttct agagatattg gaaaagcaca acgcgttgct
     8521 aacaagttga aacttggaac ggtgtggatt aatgatttcc atccatattt tgcacaagcg
     8581 ccatggggtg gatacaaaca atcaggtatc ggtagagaat taggcaaaga aggcttagaa
     8641 gagtaccttg tttcaaaaca cattttaaca aatacaaatc cacaattagt gaattggttt
     8701 agcaaataaa aattagataa ggtgagtgcc attgtaagaa cacaagacac tcactttgtt
     8761 ttgtataagt ggcgaaatgt tgattgataa tttggactaa acgcaaaatg aatcatagat
     8821 tatttcatga ctgttagtaa caatcgtaaa aggaaaagcg agtgttttgg ttagctaagt
     8881 ttagcaattc aacgataacc aatcagccac taacaaatat ttcatgcaat actcactttg
     8941 aaatacaaca aactttggag gtcataacga tgagtaacaa aaacaaatca tatgattatg
     9001 tcatcattgg aggaggcagt gcaggttctg tactaggtaa tcgtctgagt gaagataaag
     9061 ataaagaagt cttagtatta gaagcgggtc gcagtgatta tttttgggat ttatttatcc
     9121 aaatgcctgc tgcgttaatg ttcccttcag gcaataaatt ttacgattgg atttattcaa
     9181 cagatgaaga accacatatg ggcggtcgta aagtagcaca tgcccgaggt aaagttttag
     9241 gtggatcaag ttcgattaat ggcatgattt accaacgtgg taatccaatg gactatgaag
     9301 gctgggcaga accagaaggt atggaaactt gggattttgc gcactgttta ccgtatttta
     9361 aaaaattaga aaaaacatac ggtgcagcgc cttatgataa atttagaggc catgatggac
     9421 caattaagtt aaaacgaggg ccagcaacga atcctttatt ccagtcattc tttgatgcag
     9481 gtgttgaagc aggctatcat aaaacacctg atgtgaatgg atttagacaa gaaggttttg
     9541 gaccgttcga tagtcaagta catcgtggtc gccgaatgtc agcttcaaga gcatatttac
     9601 atccagcgat gaagcgtaaa aacttaaccg ttgaaacacg tgcctttgta actgaaattc
     9661 attatgaagg tagaagagca actggtgtta cgtataagaa aaatggcaaa ctacatacca
     9721 tcgatgctaa tgaagtcatt ttgtctggtg gggcattcaa tacgccacaa ttactacaat
     9781 tatctggtat cggtgattca gagttcctaa aatcaaaagg cattgagcca cgtgttcatt
     9841 tacctggtgt gggtgaaaac tttgaagatc acttagaggt atacattcaa cataaatgta
     9901 aggaacctgt atcattacag ccaagcttag atatcaagcg catgccattt attggtttac
     9961 aatggatttt cacacgtaaa ggtgcagcag catctaacca ttttgaaggt ggcggatttg
    10021 tacgttcaaa taacgaagtt gattatccta acttaatgtt ccatttctta ccaatagctg
    10081 taagatatga tggtcaaaag gcagcggtcg cacatggtta tcaagttcac gtaggaccaa
    10141 tgtattcaaa ctctcgtggt agcttgaaaa tcaaatctaa agatccattc gaaaaaccaa
    10201 gtatccgctt taattattta tcaacagaag aagataaaaa agaatgggta gaagcaattc
    10261 gtgtagcaag aaatatttta tctcaaaaag caatggatcc attcaatggt ggagaaattt
    10321 caccaggacc agaagtgcaa acagacgaag aaattcttga ttgggttcgt agagatggtg
    10381 aaacagcatt acacccatct tgtagtgcta aaatgggtcc tgcttcagat ccaatggcag
    10441 tagttgaccc gttaacaatg aaagtccacg gtatggaaaa tttacgtgta gttgatgcat
    10501 cagctatgcc acgtacgaca aatggcaata tacacgcacc tgttttaatg ttagctgaaa
    10561 aagcagcaga tattatacgt ggcagaaagc ctttagagcc acaatatatt gattattata
    10621 agcatggtgt tcatgatgaa aatgaaggtg caatcgaagt aaaaccatac gctaaataaa
    10681 tgtatatagt agactcttag tctggcatct attgtattgg tgccaggctt tttgcgtttt
    10741 atctaaatga gaagttaatg tgttgttcaa aaacgatgtg tgagtatatg aactgaaaat
    10801 agagttaatt ttacattgtg atgattaatt gacctaattg gcagacatta aaagagtgta
    10861 gaactttaaa aagttcacta aatagacatt taattgtgtt ttcttgaaag ctttcgtggt
    10921 aggatttata taagtaaatt gagagaagga atactatgag cttttacgaa tatatacaaa
    10981 catttaaaga tgataaaaca ccattaggcg aattagcgat ttggattaaa gaagatgatt
    11041 cattcccaaa acaagagaag ctaacagaaa acattttgtc ttattttcat caaatgtcca
    11101 atatagatca tgagttttta gaaattgtaa aaagatcact ttctctgtat gatcaattaa
    11161 aatcgtaaaa tcagaaataa agttagctaa aataaaaagc cggtaatttc acagatgaag
    11221 ttgtcggcta ttttcatgac tagtgttaaa taatgatcat gaaattgaag acacaaaaat
    11281 agtgtgcgat tcctgtaccc atttgtatga aatattaata ctttttacaa agtcgtatct
    11341 tttaaaaaga agccaaacta tgattgtaat taataaatac gggaatgaat tagtaataga
    11401 tataaagtaa tatgaccaaa aatataaatg aaatgaaggc atttattatg aacatttatg
    11461 atgaatatag aagttatgta atagaagaac tggatgattg tctcacaata caaaaaaata
    11521 atgacactgc atattacgat gtgctagaag cgataaatga tttatcaaat gattcattat
    11581 gtgtgttaaa tcatttatat attaacgaag gacaagaaga aacattcgag caaaaatttt
    11641 tgcgacgtaa taagcattta aaaaacgttg atgggtttaa agcattaagg tttttaagac
    11701 ctagaacagc tggtagacac tatatcatta ttacgctgtg ggaaaatagg aaagcatttt
    11761 atcattggca aaattcagct gagtacaagc atacacacaa gcatcgtggc acttcgaaag
    11821 gtgcagatgt aaaaataatt aatcgtgaat tatcatacaa tattcgtatt gaattagctg
    11881 atatggtcta gcccgagata tcaaccctca atcatttgaa agtccttgaa tgctacgtca
    11941 tggcaaagtg tagtgtcgag gactttggta tttaacccta tttaattgaa aattctgtaa
    12001 agataggcgt atgatatata taattcattt ataaaattac aatgttcatc acaggaaaag
    12061 tggatgtatg aaaggaagtt agttatgcaa aagtcagctc tattcgcgcc tgaaaaatat
    12121 aacattattt cggaaatcga aaaatatagc cacataccag ataaaaaggc aattttatat
    12181 cataatactg aaggcgaaga tatatcagtc acttaccaac agctcattga acagtctaat
    12241 aaagtaggca atgttttagc atcgcacggt ttatctaaag gtgataaagt actcattatg
    12301 atgccacgat ctattgcgac gtatgaatta tatattgctg ctttaaaatt aggtgtcgca
    12361 atcattccat gttctgaaat gctaagaact aaagatttac aataccgtat cacacatggt
    12421 gaaattaatg cagttattgc actagagcca ttcacagttg aatttgaaaa aattaaagga
    12481 tatgatgcgt taactaaatt tgttattgcc ggtcaaaaag atggatggat ttcacttgaa
    12541 gctgaaaaag aaaacgcaag taacaaacta gaaatggcag atacgacgcg agatgataca
    12601 gcgattttgt catatacatc tggtacaact ggcaatccta aagccgttac acattgtcat
    12661 ggatggggat ttgcacattt acaaatggca ccaaaacatt ggttatgtat taatgaagat
    12721 gacttagttt gggcaacagc agcaccaggt tggcaaaaat gggtatggag tcctttctta
    12781 tctgtattag gttcaggtgc aactgctttt gtatttaatg gaagattcag tcctgaaaca
    12841 tacttagaat tgcttcaaaa atatcaaatt aatgttttat gttgtacacc gacagaatat
    12901 cgtatgatgg ctaaattaca gaacttaaat gattatgact taacgcattt acatagtgcc
    12961 gtttctgcag gtgagccact aaatcgagaa gtagttgaac aattcaagaa atactttaat
    13021 ttaactgtaa gagatggata tggccagact gaaagtacct tgcttatagg ctttttaaaa
    13081 gatacaccac aaaggattgg atcaatgggt aaaggcattc cgggtagttc ggtcactgta
    13141 gtagatgatg aggggaatag cgtacctgct aatacggaag ggaatattgc agtaccactt
    13201 gatttgccag cacttttcaa aggatattat aaggagccag aacgtacggc gaaagcgcaa
    13261 acaggtaaat actacatcac tggtgactta gctcatgtag atgatgatgg ttatttctgg
    13321 tttgaaggac gtcgagatga cattattatt agttcaggct atacgattgg gccttttgaa
    13381 gttgaagatg cgttaacgaa tcatccagcc gttaaagaat gtgctgtagt agcaaaacct
    13441 catgatatac gaggcaatat tgtgaaagca ttcgttattt tacaagacca tactgcgggt
    13501 gatgatacgt tagttaaaga actacaacaa tttgttaaaa atgaagttgc accatataaa
    13561 tatccgagag agattgaatt cgttgacgac ttaccaaaaa caaactcagg taaaattcgt
    13621 cgtgttgaac tacgagatgc tgaaatagaa aaatggcaac aacaaaaaga tagcaatcaa
    13681 taaacatagc aaagcagtcc aatgcgtaag gtatgatgat acgcactgga ctgcttgttt
    13741 atttatgatg ttctttgtcg tctagttata aataataaaa ttagtttaga aacaagcgca
    13801 accagtatta agaatgagaa aatataagat gttaaacctc gaatatccca atttaataaa
    13861 aatacattac tatcaccggc attaagttga aactcagtgt gtgttaaaat aataattaca
    13921 atacctataa gtgcaagatt caaaataatt ttcaatatta aaggtaattg aagtggtttt
    13981 cttggatgca tgtgtattga atctcctttt tatgattgat tttacactta tattgtatca
    14041 aaatagagta taggtttaaa atgctataag ccaaatgtag attaaaacaa tcgttagcta
    14101 tttgttgtca aataattatg attgatttga tatttatctt ctatgaataa aagatttaat
    14161 atattgcaaa gttaatgaat aattataatt tacatttacc actgcttgct ttaacatata
    14221 catgtaagca ctaactatag tattttgtta cagcgtatca attaaaacag gaagttatct
    14281 atggcgttga tattttaaag aaatatgtca gttttatgta actttcatat tgatgataca
    14341 catttacaat ttttggagag gtgaaaccaa tggctaagtc taatagtaaa gacatcgttt
    14401 taattggagc cggtgtactt agcacaacat ttggttcaat gttaaaagaa attgagccag
    14461 actggaatat ccacgtttac gaacgcttgg atcgtcctgc aatcgaaagt tcaaacgaaa
    14521 gaaataatgc tggtacgggt catgcagcat tatgtgagtt gaactacaca gttttacaac
    14581 ctgatggttc tatcgacatc gaaaaagcga aagtgattaa cgaagagttt gagatttcaa
    14641 aacaattctg gggtcactta gtgaaaagcg gtagcatcga gaatccaaga gaatttatca
    14701 atccattacc acacatcagt tatgttagag gtaaaaacaa tgttaaattc ttaaaagatc
    14761 gttacgaagc gatgaaagct ttccctatgt tcgataatat cgaatatact gaagacatcg
    14821 aagtaatgaa aaaatggatt ccattgatga tgaaaggccg tgaagataac cctggtatca
    14881 tggcggcaag taaaattgac gaaggtacag atgtaaactt cggtgaatta acacgtaaaa
    14941 tggctaaaag cattgaagca catccaaatg ctacagtgca atttaaccat gaagttgttg
    15001 attttgaaca attatcaaat ggtcaatggg aagttactgt taaaaatcgc ctaactggtg
    15061 agaaattcaa acaagtaact gactatgtat tcatcggtgc tggcggtgga gcaattccat
    15121 tattacaaaa aacaggtatc cctgaaagta agcatttagg tggattccct atcagtggtc
    15181 aattcttagc ttgtacaaac ccacaagtta ttgaacaaca cgatgccaaa gtttatggta
    15241 aagagccacc tggtacacca ccaatgacag tacctcattt agatacgcgt tacattgatg
    15301 gtcaaagaac attattattt ggaccatttg ctaatgttgg acctaaattc ttgaaaaatg
    15361 gttctaactt agatttattc aaatcagtta aaacatacaa cattacaact ttattagcag
    15421 cagcagttaa aaacttacct ttaattaaat actcatttga ccaagtgatt atgacaaaag
    15481 aaggttgtat gaaccactta cgtactttct atccagaagc acgtaatgaa gattggcaat
    15541 tatacactgc tggtaaacgt gtacaagtta tcaaagatac acctgaacac ggtaaaggat
    15601 tcatccaatt cggtacagaa gtggttaact cacaagacca tactgtaatc gcattattag
    15661 gtgaatcacc aggggcttca acttcagttt cagttgcgtt agaagtatta gaacgtaact
    15721 tccctgaata caaaactgaa tgggcaccta aaatcaagaa aatgattc
//
LOCUS       DAKPJH010000060        15731 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.060, whole genome shotgun sequence.
ACCESSION   DAKPJH010000060 DAKPJH010000000
VERSION     DAKPJH010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15731
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.060"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..435
                     /gene="holA"
                     /locus_tag="OY092_001630"
     CDS             <1..435
                     /gene="holA"
                     /locus_tag="OY092_001630"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HCX1076573.1"
                     /translation="ILFLGDRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAIH
                     LVKDLITMKEEPIKLLALITSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALG
                     QVRHYQLDELLNIIDACAETDYKLKSSYMDKQLILELFILSL"
     gene            complement(480..731)
                     /locus_tag="OY092_001631"
     CDS             complement(480..731)
                     /locus_tag="OY092_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HCX1076574.1"
                     /translation="MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNAD
                     NKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK"
     gene            1077..2900
                     /gene="lepA"
                     /locus_tag="OY092_001632"
     CDS             1077..2900
                     /gene="lepA"
                     /locus_tag="OY092_001632"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HCX1076575.1"
                     /translation="MDNEQRLKRRENIRNFSIIAHIDHGKSTLADRILENTKSVETRD
                     MQDQLLDSMDLERERGITIKLNAVRLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNELELLPVINKIDLPAAEPERVKQEIEDMI
                     GLDQDDVVLASAKSNIGIEEILEKIVEVVPAPDGDPEAPLKALIFDSEYDPYRGVISS
                     IRIVDGVVKAGDKIRMMATGKEFEVTEVGINTPKQLPVDELTVGDVGYIIASIKNVDD
                     SRVGDTITLASRPASEPLQGYKKMNPMVYCGLFPIDNKNYNDLREALEKLQLNDASLE
                     FEPESSQALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYQCILRDGSEVT
                     VDNPAQMPDRDKIDKIFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVN
                     IVYELPLAEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFI
                     VHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLAKCYGG
                     DISRKRKLLEKQKAGKAKMKAVGNVEIPQDAFLAVLKMDDE"
     gene            3521..4645
                     /locus_tag="OY092_001633"
     CDS             3521..4645
                     /locus_tag="OY092_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HCX1076576.1"
                     /translation="MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMS
                     TAKYRNLMTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQL
                     LEKYGVNRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPK
                     QTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLL
                     MSKIEQSPFHQYEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPV
                     KHYIKAINKESKAILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFQKKFDQSIESVFG
                     QTINNLKEKELILEKNDAIALTKRGKVIGNEVFEAFLIND"
     gene            4746..5723
                     /gene="hrcA"
                     /locus_tag="OY092_001634"
     CDS             4746..5723
                     /gene="hrcA"
                     /locus_tag="OY092_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcription repressor HrcA"
                     /protein_id="HCX1076577.1"
                     /translation="MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRN
                     EMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQY
                     DVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVE
                     HVHLASDIPFNNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINQLLNTMN
                     NHISNQSNSIYMGGKVKLIDALNESNVSSIQPILQYIESNRIAELLQDISSPNINVKI
                     GNEIDDSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW"
     gene            5755..6381
                     /gene="grpE"
                     /locus_tag="OY092_001635"
     CDS             5755..6381
                     /gene="grpE"
                     /locus_tag="OY092_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HCX1076578.1"
                     /translation="MTNKDESVEKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAI
                     EETSDENVIEEIDPKDQKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQ
                     AQRVLTDILPAIDNIERALQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEG
                     EAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVNQ"
     gene            6450..8282
                     /gene="dnaK"
                     /locus_tag="OY092_001636"
     CDS             6450..8282
                     /gene="dnaK"
                     /locus_tag="OY092_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HCX1076579.1"
                     /translation="MSKIIGIDLGTTNSCVTVLEGDEPKVIQNPEGSRTTPSVVAFKN
                     GETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIEGKSYTPQEISAMILQNLKNTAE
                     SYLGEKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDK
                     DEKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVAEFKKEN
                     GVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEVNLTRSKFE
                     ELSDSLIRRTMEPTRQAMKDAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSK
                     SQIYSTAVDNQPSVDVHVLQGERPMAADNKTLGRFQLTDIPPAERGKPQIEVTFDIDK
                     NGIVNVTAKDLGTNKEQRITIQSSSSLSDEEIDRMVKDAEVNAEADKKRREEVDLRNE
                     ADSLVFQVEKTLTDLGENIGEEDKKSAEEKKDALKTALEGQDIEDIKSKKEELEKVIQ
                     ELSAKVYEQAAQQQQQAQGANGGQNNDSTVEDAEFKEVKDDDKK"
     gene            8418..9557
                     /gene="dnaJ"
                     /locus_tag="OY092_001637"
     CDS             8418..9557
                     /gene="dnaJ"
                     /locus_tag="OY092_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HCX1076580.1"
                     /translation="MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADE
                     KFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFS
                     SFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPG
                     TSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKT
                     VKLEVKVPEGVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKL
                     NVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDI
                     KVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE"
     gene            9561..10499
                     /gene="prmA"
                     /locus_tag="OY092_001638"
     CDS             9561..10499
                     /gene="prmA"
                     /locus_tag="OY092_001638"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HCX1076581.1"
                     /translation="MNWTELSIIINHEAVELATNILENHGSNGVVIEDSDDLINQPED
                     KYGEIYALKKEDYPDKGVRLKAYFNEMTYDDKLRQQIKDELLNLDELDQHNVQFSEQI
                     IAETDWENEWKNYFHPFRASKKFTIVPSWETYAKEADEELCIELDPGMAFGTGDHPTT
                     SMCLKAIETYVLPQHSVIDVGTGSGILSIASHLIGVKRIKALDIDEMAVSVAKENFRR
                     NHCETLIEAVPGNLLKDETEKFDIVIANILAHIIDEMIEDAYNTLNEGGYFITSGIIK
                     EKYEGIQSHMERVGFKIISEQHDNGWVCLVGQKVSE"
     gene            10501..11253
                     /locus_tag="OY092_001639"
     CDS             10501..11253
                     /locus_tag="OY092_001639"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HCX1076582.1"
                     /translation="MQRYFIDQNADVSQRFFITKKEDIHHITNVMRYDVGSKIILTFN
                     DQTVYLCEIADITSDKIAVDLKEKQNINTELPVDVTICSGLIKADKYEWLLQKATELG
                     ASSFIAVSMERSIVKLNEAKVAKKIERWQKIIKEAAEQSYRLVIPSIQFESNLKLICD
                     TIDNYDYILIAYEEEAKDGELSNFKQTLQQFKAQDKVLMIFGPEGGLSENEISLFSNT
                     STVVGLGPRILRAETAPLYALSAISYENELMG"
     gene            11260..12606
                     /gene="mtaB"
                     /locus_tag="OY092_001640"
     CDS             11260..12606
                     /gene="mtaB"
                     /locus_tag="OY092_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HCX1076583.1"
                     /translation="MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVI
                     NTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDR
                     HKLLGYIDEFRKERQPINGVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFC
                     IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDL
                     ETINGLERIRISSIEASQLTDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTM
                     DRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPR
                     IGTPAARMDDQIDEEIKNERVHKLITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTL
                     VGYADNYMKVQFEGDESLIGQIVKVKITQANYPLNEGQAIKVVDFATNKSDREVLV"
     gene            12899..13075
                     /locus_tag="OY092_001641"
     CDS             12899..13075
                     /locus_tag="OY092_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HCX1076584.1"
                     /translation="MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVK
                     RKKKSEAARKRKFK"
     gene            13319..14002
                     /locus_tag="OY092_001642"
     CDS             13319..14002
                     /locus_tag="OY092_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HCX1076585.1"
                     /translation="MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYS
                     KKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGM
                     ILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSE
                     SGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEG
                     TRVVVREVD"
     gene            14020..15009
                     /gene="floA"
                     /locus_tag="OY092_001643"
     CDS             14020..15009
                     /gene="floA"
                     /locus_tag="OY092_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500186.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HCX1076586.1"
                     /translation="MFSLSFIVIAVIIVVALLILFSFVPIGLWISALAAGVHVGIGTL
                     VGMRLRRVSPRKVIAPLIKAHKAGLALTTNQLESHYLAGGNVDRVVDANIAAQRADID
                     LPFERAAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANIAR
                     LVGGAGEETIIARVGEGIVSTIGSSKHHTEVLENPDNISKTVLSKGLDSGTAFEILSI
                     DIADVDISKNIGADLQTEQALADKNIAQAKAEERRAMAVATEQEMKARVQEMHAKVVE
                     AESEVPLAMAEALRSGNISVKDYYNLKNIEADTGMRNAINKRTDQSDDESPEH"
     gene            15026..15724
                     /locus_tag="OY092_001644"
     CDS             15026..15724
                     /locus_tag="OY092_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HCX1076587.1"
                     /translation="MSVGILIFVISVIISIITTMRENSHKDRQNQKPPQKTSTDNEPK
                     KGGFFEEIERTFKEISEELNEEEKKSSKRKYDDTLPPLFDELPKEEPKSKPVVEPMAP
                     KKQPETKPMTEKPITVPKAEPVEQKHRPSRQDNSDEIRRQLEKSLRDDIKTIRTDIDR
                     EKEKQIAKMEKRARDIIEDKYLSERTKRLKLKQLLNSQNVEKDLTKSAFQFDKDEVIN
                     GMIWSEILAKPKQL"
BASE COUNT         5854 a         2180 c         3014 g         4683 t
ORIGIN      
        1 attttatttt taggcgatag accaacaatt aataagcagg atgttaacca aattattaat
       61 agaagtttag aacaaaatgt atttttactg actgaataca ttcagaaaag aaagaaagaa
      121 caagcaattc atttagtaaa agatttaata actatgaaag aagaacctat taaattactt
      181 gcactaatta caagtaatta ccgattattt tatcaatgta agattttgag tcaaaaagga
      241 tatagtggac agcaaattgc taaaacaata ggcgtacatc catacagagt aaaattagcg
      301 ttaggacaag taagacatta tcaacttgat gaattattga atattataga tgcttgtgcg
      361 gaaactgatt ataaacttaa atcatcatat atggataaac agttaatact ggaattattc
      421 attctatctt tataaaaaat aaaagttcaa gcatgcgctt gaacttttat ttaaaaagat
      481 tatttatttg cagtcattaa ttgtgattta atacggtcag ctttgtttga atgtattaaa
      541 ttactttgag cagctttgtc tactaactta actgctaagc ttactaattc atttttatta
      601 tcagcgttat ttgaaacagc tgttttagcg tttttaactg ctgtacgcat tgcactcttt
      661 tgtgaaatgt tgcgtgcttc agctttttca gttgttttta cgcgtttaat tgcagatttg
      721 atatttgcca tttctgtcac ctcctaaaag tgagttcatc ttatcaaaat tttatttgat
      781 tacaacaaga aatattttaa caaaagtcta accgttgtgc aatcatttat ttgatggggt
      841 tagcttaaaa ttttgcagat ttaataaatt gtgttggaaa cacaatcaat acgttttata
      901 attataagta cgtaattaac atattaacat atcgcaagta tgtatttaaa taaagattgt
      961 tataatttca aagttcatcc aagattatgg cgtttgcatt tacctattaa aaacgttatt
     1021 atatcaaaga tgcgaaagat aatacgggtt tattttatga aagtgagaag gataaaatgg
     1081 ataatgagca acgcttaaaa agaagagaga atataaggaa tttctcgatt atagcacata
     1141 ttgaccacgg aaaatctaca ttggctgata gaattttaga aaataccaaa tcagttgaaa
     1201 caagagatat gcaagatcag ttactagatt caatggattt agaaagagaa cgtggtatta
     1261 caatcaaatt aaacgcagta cgtttaaagt acgaagctaa agatggaaat acttatacat
     1321 tccatttaat cgatacgcct ggacacgtcg attttacata tgaagtgtca cgttctttgg
     1381 cagcttgtga gggtgcgatt ttagtagtag atgcggctca aggtatcgaa gcacaaacat
     1441 tagcaaatgt ttatttggca ttagataatg agttagagtt attgcctgtt attaacaaaa
     1501 ttgatttacc tgctgcagaa cctgaacgcg tgaaacaaga aattgaggat atgataggtt
     1561 tagaccaaga cgatgttgtt ttagcaagtg ctaaatctaa cattggaatt gaagagatac
     1621 tagagaaaat agttgaagtt gtgccagctc cagatggtga cccagaagca ccactaaaag
     1681 cgttaatatt tgattctgag tatgatccat atagaggggt aatttcatcg ataagaattg
     1741 tagacggtgt tgttaaagcc ggggataaaa ttcgaatgat ggccactggt aaagagttcg
     1801 aagtaacaga agttggaatt aatacaccta agcagcttcc agttgatgaa ttaacagttg
     1861 gtgatgttgg ttatattatt gcaagtatta aaaatgttga tgattctagg gttggtgaca
     1921 caatcacatt agctagtaga cctgcatcag aaccattgca aggttataag aaaatgaatc
     1981 caatggtata ttgcggactg ttcccaatag ataacaaaaa ttataatgat ttaagagaag
     2041 cattagaaaa attacaattg aatgatgcat cattagaatt tgagcctgaa tcatcacaag
     2101 cattaggttt tggttataga actggtttct taggtatgtt acacatggaa ataattcaag
     2161 aaagaattga aagagaattt ggtattgaat taattgcaac cgcaccatct gtaatttatc
     2221 aatgtatttt aagggacggt tcagaagtga cggttgataa cccagcacaa atgccagatc
     2281 gtgataaaat tgataaaata tttgagccat atgttcgagc aactatgatg gttccaaatg
     2341 actatgtcgg tgcagtaatg gaattatgtc aacgtaaacg tggacaattt ataaatatgg
     2401 actatttaga tgatattcgt gtaaatattg tttatgaatt acctttagct gaagttgtat
     2461 ttgatttctt cgatcaactt aaatctaata ctaaaggata tgcatcattt gattatgaat
     2521 tcatcgaaaa taaagaaagt aatttagtca agatggatat tttattaaat ggtgataaag
     2581 tggatgcgct aagcttcata gttcatagag attttgcgta tgaacgtggt aaagcattag
     2641 ttgaaaaact taaaacgtta attccaagac agcaatttga agtacctgta caggctgcaa
     2701 taggacaaaa aattgtagcg cgtacaaata ttaaatcaat gggtaaaaac gttttagcta
     2761 aatgttatgg cggtgacata agccgtaaac gtaaattact tgaaaaacaa aaagcaggta
     2821 aagctaagat gaaagcagtt ggtaatgttg aaattccaca ggatgctttc ttggctgtgt
     2881 tgaaaatgga tgacgaataa gtttttaaaa aatctattaa caatttacaa tgaataaagt
     2941 ttaataacta aaaagaggga gcctaggata aattaacgtc ctgggcttta caatgttata
     3001 ttggcagcca tcgacagagt taaaatgagc ttataacaat ggggccccaa catagaagct
     3061 gacgaaaagt cagcttacaa taatgtgcaa gttggggtgg ggccccaaca cagagaattt
     3121 cgaaaagaaa ttctacaggc aatgcaggtt ggcggggccc caacaaagaa gctgacgaaa
     3181 agtcagctta caataatgtg caagttgggg tgggacgacg aaataaattt tgtgaaaata
     3241 tcatttctgt cccactccct tatgcatgag tttaactcat gtaattctat ttttaagtac
     3301 atattacctc tggctaatgt gtaagagcca ctacataata aatcattagt ggttctttat
     3361 tatttctatc tcactccctc ttaacattta taaatattaa aatgaatcga tatattagac
     3421 aatcattgat taaacgttaa agttaaaagt aagaataata gcagatagtc caacaggatg
     3481 tagccgattg gataaacagt ctgagaagcg gggcattaaa atgacggtac aaagtgcata
     3541 tatacatatt ccattttgtg taagaatatg tacatattgt gatttcaata aatattttat
     3601 acagaatcaa cctgtagatg agtacttaga tgcactaata acagaaatgt ctacagccaa
     3661 atataggaac ttaatgacca tgtatgtagg tggtggcaca ccaacggccc tttctattaa
     3721 tcagttggaa agattactta aagcaatacg tgatacgttt acaatcacag gcgagtatac
     3781 atttgaagcc aatcctgatg agttaactaa agagaaagtc caactattag agaaatatgg
     3841 agtaaacaga atttcaatgg gcgttcaaac attcaagccg gagttattgt ctgttttagg
     3901 tagaacgcac aatactgaag atatttacac ttcggtgtta aatgctaaaa acgcaggtat
     3961 taaatcaatc agtttagatt taatgtatca tttaccgaaa cagacgattg aagattttga
     4021 acaaagttta gatctagctt tagatatgga tattcaacat atttcgagtt acggcttaat
     4081 acttgaacct aaaacccaat tttataatat gtatagaaaa gggttgctca aacttcctaa
     4141 tgaggattta ggtgctgaca tgtatcagtt gctgatgtct aagatagaac aatctccttt
     4201 ccatcaatac gaaatatcta attttgcatt agatggccat gaatcagaac ataataaggt
     4261 ttactggttt aatgaggaat attatggatt tggagcaggt gcaagtggtt atgtagatgg
     4321 tgtgcgttat acgaatatca atccagtgaa acattatatc aaagctataa ataaagaaag
     4381 taaagcaatt ttagtatcaa ataaaccttc tttgactgag agaatggaag aagaaatgtt
     4441 tcttgggttg cgtttaaatg aaggtgtgag tagtagtagg ttccaaaaga agtttgacca
     4501 atctattgaa agtgtctttg gtcaaacaat aaataattta aaagagaagg aattaatttt
     4561 agaaaagaac gatgcgattg cactaacaaa gcgagggaaa gtcatcggta atgaggtttt
     4621 tgaagctttc ctaataaatg attaaaaaaa attgaaattt cgagtcttta acattgactt
     4681 actttgacca atttgataaa ttataattag cacttgagat aagtgagtgc taatgaggtg
     4741 aaaacatgat tacagatagg caattgagta tattaaacgc aattgttgag gattatgttg
     4801 attttggaca acccgttggt tctaaaacac taattgagcg acataacttg aatgttagtc
     4861 ctgctacaat tagaaatgag atgaaacagc ttgaagattt aaactatatc gaaaagacac
     4921 atagttcttc agggcgttcg ccatcacaat taggttttag gtattatgtc aatcgtttac
     4981 ttgaacaaac atctcatcaa aaaacaaata aattaagacg attaaatcaa ttgttagttg
     5041 agaatcaata tgatgtatca tcagcattga catattttgc agatgaatta tcaaatatat
     5101 ctcaatatac aactttagtt gttcatccta atcataaaca agatattatc aataatgtac
     5161 acttgattcg tgctaatcct aatttagtta taatggttat cgtattttca tcaggtcatg
     5221 tagagcatgt acatcttgct tcagacatac cgtttaataa cgacaaacta aatacaatat
     5281 caaattttgt tacaaacaaa ctaactgagt ttaatcagaa tttacaagat gatattgtct
     5341 cttttgttca atcagagcag gaagaaatat ttatcaatca attgttaaat acgatgaata
     5401 atcatatttc taatcaaagt aatagcattt atatgggtgg aaaggttaaa cttattgatg
     5461 cattgaatga aagtaatgta tcttcaattc agcccattct acaatatata gaatcaaata
     5521 gaattgcaga attattacaa gatatatctt caccaaatat taatgtaaaa attggtaacg
     5581 aaattgatga cagcttaagt gatatttcaa ttgtaacaag tcaatatcat tttgatgaaa
     5641 cgttaaaagg tcaaatcgct gtgattggac ctacagctat gcattatcaa aatgtcattc
     5701 aattattaaa tagaatttgg taatgatgga ttagaaagta ttggaggaca gaaaatgaca
     5761 aataaagacg aatcagttga aaaaaacact gaatcaacag ttgaagaaac aaacgtcaaa
     5821 caaaatattg atgattcagt tgaacaagct gaagaaagta aaggtcattt acaagatgaa
     5881 gcaatagaag aaacgtctga cgagaatgtt attgaagaaa tagatccaaa agatcaaaaa
     5941 attaatgaac ttcaacaatt agcagatgaa aacgaagaga aatatttaag gctctacgct
     6001 gagtttgaaa attataagcg tagaattcaa aaagaaaatg aaataaacaa aacatatcaa
     6061 gcacaacgtg tgttaacaga tattttacca gcaatagaca atatagaacg tgcacttcaa
     6121 attgaaggtg atgatgagac ttttaaatct cttcaaaaag gtgtacaaat ggtgcatgaa
     6181 agtttgatta acgcactaaa agataatggt cttgaagtta ttaaaactga aggtgaagca
     6241 tttgatccaa atattcacca agctgtagtt caagatgata accctgattt tgaatctggc
     6301 gaaatcactc aagaactaca aaaaggatac aagcttaaag atagagtatt aagaccatca
     6361 atggtcaaag taaaccaata acttaaattt ggcgaaaaga cattgtttaa aattaaatta
     6421 atttaatgat taaatggagg aattttatta tgagtaaaat tattggtata gacttaggta
     6481 caacaaattc atgtgtaaca gtattagaag gcgatgagcc aaaagtaatt caaaaccctg
     6541 aaggttcacg tacaacacca tctgttgtag ctttcaaaaa tggagaaact caagttggtg
     6601 aagtagctaa acgtcaagct attacaaatc caaacactgt tcaatctatt aaacgtcata
     6661 tgggtactga ttataaagta gatattgaag gtaaatcata cacaccacaa gaaatctcag
     6721 ctatgatttt acaaaactta aaaaatacag ctgaaagcta tttaggtgag aaagttgaca
     6781 aagctgtaat tacagtacct gcatacttta acgatgctga acgtcaagca actaaagatg
     6841 ctggtaaaat tgctggttta gaagttgagc gtatcattaa tgaaccaaca gctgcagcat
     6901 tagcatatgg tttagacaaa actgataaag atgaaaaagt tcttgttttt gacttaggtg
     6961 gcggtacatt tgacgtatct atcctagaat taggtgacgg tgtattcgaa gtactatcaa
     7021 cagccggtga caacaaactt ggcggtgatg attttgacca agtaattatt gactacctag
     7081 ttgcagaatt caaaaaagaa aatggcgtag acttatctca agataaaatg gcattacaac
     7141 gtttgaaaga tgctgctgaa aaagctaaaa aagacttatc aggtgtatca caaactcaaa
     7201 tctcattacc atttatctca gctggtgaaa acggtccatt acacttagaa gtaaacttaa
     7261 ctcgttctaa atttgaggaa ttatcagatt cattaattag aagaacaatg gaacctacac
     7321 gccaagcaat gaaagacgct ggcttaacaa actcagatat cgatgaagtt atcttagttg
     7381 gtgggtcaac tcgtattcca gcagtacaag aagctgtcaa aaaagaaatc ggtaaagaac
     7441 ctaacaaagg tgtaaaccca gacgaagtag tggcaatggg agctgcaatc caaggtggcg
     7501 ttatcacagg tgacgttaaa gacgtagtat tattagacgt aacaccacta tctttaggta
     7561 ttgaaatttt aggtggacgt atgaatacgt taattgaacg taacactacg attcctacat
     7621 ctaaatctca aatctattca acagcagtag ataatcaacc atcagtagat gtacacgtat
     7681 tacaaggtga acgtccaatg gctgcggata ataaaacact tggtagattc caattgactg
     7741 atattccacc agctgaacgt ggtaaacctc aaattgaagt aacgtttgat atcgataaaa
     7801 acggtattgt aaatgtaact gcaaaagact taggtacaaa taaagaacaa agaattacaa
     7861 ttcaatcaag ttcttcatta tcagacgaag aaatcgaccg tatggtaaaa gatgctgaag
     7921 ttaacgctga agcagataaa aaacgtcgtg aagaagtaga cttaagaaac gaagctgaca
     7981 gcctagtatt ccaagttgaa aaaactttaa ctgatttagg cgaaaatatc ggtgaagaag
     8041 ataaaaaatc tgctgaagag aaaaaagacg ctcttaaaac tgctttagaa ggtcaagata
     8101 tagaagatat taaatctaaa aaagaagaac ttgaaaaagt gattcaagaa ttatcagcaa
     8161 aagtatatga gcaagcggct caacagcaac aacaagcaca aggtgctaat ggtggtcaaa
     8221 acaacgatag cactgtagaa gatgctgaat ttaaagaagt aaaagacgac gacaaaaaat
     8281 aattaaacaa tacaattaga atgttgtcat gatctgaaaa gtcaaagtca atagaacatt
     8341 ggctttggct ttttatttgg atagtatgac atattacgtt aaactatatg agttaattaa
     8401 gaaaaggaga gatagctgtg gccaaaagag actattatga agttttaggc attagtaaag
     8461 atgcttcaaa agatgaaatc aaaaaagcgt atcgaaagct ttcgaaaaaa tatcatccag
     8521 atattaacaa agaagaaggt gcagatgaaa agtttaaaga aatttctgaa gcatatgaag
     8581 ttttaagtga tgataataaa cgcgcaagct atgatcaatt tggacatgac ggtccgcaag
     8641 gttttggcgg acaaggattc aatggctctg actttggtgg ttttagtggc ttcggtggcg
     8701 gcggttttga agatatcttt agctctttct tcggtggcgg cagacaaaga gatccaaatg
     8761 caccgcaaaa aggtgatgat cttcagtata caatgacatt gacatttgaa gaagcggtat
     8821 ttggtacaac aaaagaaatt tcaatccgta aagatgtaac atgcgaaaca tgtcatggtg
     8881 atggtgcaaa gcctggaaca agtaaaaaga cttgtagtta ctgtaatggc gctggtcatg
     8941 tagctgttga acaaaataca attttaggta gagttcgtac tgaacaagtt tgtcctaaat
     9001 gtaatggaag tggtcaagaa tttgaagaag cttgtccaac atgtcacgga aaaggtactg
     9061 aaaataaaac agttaaatta gaagtgaaag tacctgaagg tgtcgacaat gaacaacaaa
     9121 ttagattagc tggtgaaggc tctccaggcg tgaatggagg acctgctggt gatttatacg
     9181 tagtatttag agttaaacca tctgaaacat ttaaacgtga tggtgatgat atttattaca
     9241 aattaaatgt tagcttccca caagcagctt taggcgatga aataaaaata ccaacattaa
     9301 ataatgaagt tatgttaaca atccctgctg gtacacaaac aggtaagcaa ttccgcttaa
     9361 aagaaaaggg tataaaaaat gttcatggct atggatacgg agatttatat gttgatatta
     9421 aagtagtaac gcctactaaa ttaacagata gacaaaaaga actaatgaaa gaatttgccc
     9481 aattaaatgg tgaagaaatt aatgaacaac cttcgaattt taaagataga gcaaaaagat
     9541 tctttaaggg agaataaagt atgaactgga cagagctttc aattattatt aatcatgaag
     9601 cagtagaatt ggctaccaat atacttgaaa atcatggatc aaatggtgtc gtgatagaag
     9661 attcagatga tttaattaac caaccagaag ataaatacgg tgaaatttac gctttgaaaa
     9721 aagaggatta tccagataag ggagtaagat tgaaagccta ttttaatgaa atgacttatg
     9781 atgataagtt gcgacagcaa attaaagatg agttattaaa tttagatgaa cttgatcaac
     9841 ataacgttca attcagtgag caaattattg cagagacgga ttgggaaaat gaatggaaaa
     9901 actatttcca tccattccga gcgtcgaaga agttcacaat agttcctagt tgggaaacat
     9961 atgctaaaga agcggatgaa gagctttgca ttgagctcga cccaggtatg gcttttggaa
    10021 caggcgatca tccgactaca agtatgtgtt tgaaggcaat agaaacatat gtattgccac
    10081 agcattcagt aattgatgtt ggtactggct caggtatatt aagtattgca agtcatctaa
    10141 tcggtgtaaa acgaattaaa gcgttggata ttgatgaaat ggcagtgagt gtagctaaag
    10201 aaaacttcag aagaaatcat tgtgaaacgt taattgaagc tgttccaggt aacttattga
    10261 aagacgaaac agaaaaattt gatattgtaa tagcaaatat tttagcgcat attattgatg
    10321 aaatgattga agatgcttat aatactctaa atgaaggcgg ttattttatt acttctggta
    10381 ttataaaaga gaagtatgaa ggtatacagt cacatatgga gcgtgtaggt tttaaaatta
    10441 tttcagaaca acatgacaac ggttgggttt gtcttgttgg ccagaaagtg agtgaataat
    10501 gtgcaacgtt atttcataga ccaaaacgct gatgtaagtc agcgtttttt tattacaaaa
    10561 aaagaagata ttcatcatat aacaaatgta atgagatatg atgttggtag taaaattatt
    10621 ttaactttta atgatcaaac agtttattta tgtgaaattg ctgatataac aagtgataaa
    10681 attgcagttg atttaaaaga aaaacaaaat attaatacag aattgccagt tgatgttacg
    10741 atttgcagtg gactaattaa agctgacaaa tatgagtggt tgctacaaaa agctactgaa
    10801 ttgggtgctt catcatttat agctgtgagc atggaacgct caattgttaa attaaacgag
    10861 gcgaaagttg ccaaaaagat agagcgttgg caaaaaataa ttaaagaagc tgctgaacaa
    10921 agctatcgtt tagtgattcc atctattcaa ttcgagtcga atttaaaatt aatttgtgat
    10981 actattgata attatgacta tattcttatt gcatatgaag aggaagcaaa agatggtgag
    11041 ttaagcaatt tcaagcaaac tttacaacaa ttcaaggctc aggataaagt gttgatgatt
    11101 tttggtcctg agggtggttt gtcagaaaat gaaatttcat tatttagtaa tactagtaca
    11161 gttgttggtc ttggaccgag aattttacgg gcagaaactg caccattgta tgcgttaagt
    11221 gcaataagtt atgaaaatga attaatgggg tgaatattta tgtcaacagt tgcgtttcac
    11281 acattaggtt gtaaagtaaa ccattatgaa actgaagcaa tctggcaatt atttaaagaa
    11341 gcaaactatg agcgcgttga ctttgaagcg aatgctgatg tatttgttat taatacttgt
    11401 acagtaacga atacaggtga taaaaaaagt cgtcaaatta ttagacgtgc aataagacaa
    11461 aatcctgatg ctgtaatttg tgtaacaggt tgttatgcgc aaacttcatc agctgaaatt
    11521 atggaaattc ctggtgtcga tgtagtagtt ggtacacaag atagacataa actattaggt
    11581 tacattgatg aattccgtaa agaacgccaa ccaattaatg gtgttggaaa tatcatgaaa
    11641 aatcgtaaat atgaagaatt agatgtccca tattttacag atagaacacg tgcgtcatta
    11701 aaaattcaag aaggttgtaa caacttctgc acattctgta ttattccatg ggctcgtggc
    11761 ttaatgcgtt caagagatcc ggaaaaagta gttgaacaag cgacgcaact agtgaattca
    11821 ggatataagg aaattgtatt gacgggaatt catacaggtg gatatggtca agatttaaaa
    11881 gattataact tggcccaatt attacgtgat cttgaaacga ttaatggatt agaacgaatt
    11941 cgaatttctt caattgaagc aagtcaactt acagatgaag taattgacgt tttagaacgt
    12001 tcaacaaaag ttgtgcgtca tttgcatatt ccattacaat ctggttcaga tacagtatta
    12061 aaacgtatga gacgtaagta tactatggat agattttcag aacgattaac aaaattgcat
    12121 aaagctttac cagacttggc agttacgagt gatgtaattg ttggtttccc aggtgaaact
    12181 gaagcagagt tccaagaaac atatgatttt atcgtaaagc ataagttctc tgaactgcat
    12241 gttttccctt attctcctag aattggcacg ccagctgcaa gaatggatga ccaaattgat
    12301 gaagaaatta aaaatgaacg cgtgcataag ttaattacgc taagcaatca actcggaaag
    12361 ttatatgcgt ctaaatttga tcaagatgtg cttgaagtaa ttcctgagga acagggtgac
    12421 acagaaggta cattagttgg atatgcagat aattatatga aagtacaatt tgaaggtgac
    12481 gaatcactca taggtcaaat tgtaaaagtt aaaattacgc aagcaaatta tccattaaat
    12541 gaagggcaag caattaaagt tgttgatttt gcaacaaata aatctgatag agaagtttta
    12601 gtttaagtat tccttgattc ataccataag gttccgtatt aaagatatag gttttgtaac
    12661 gttgttttaa cggcttcaca atttactata taagcaactc ttctcattaa ataaattatt
    12721 aagagatttt tagaacaaaa tctaaaagtc tttgtgattt tgatgtgaaa tatgtttcaa
    12781 ataaaaaaca atttactaat tgaccataaa ttacagatat attatactta taaatgcata
    12841 gttttactgt gcaattgact ataaagttcc gttgatattt ggagggaggg aaatacagat
    12901 gtctaaaaca gtagtacgta aaaatgaatc acttgaagat gcgttacgta gatttaaacg
    12961 ttcagtttct aaaagtggaa caatccaaga agtacgtaaa cgtgaatttt acgaaaaacc
    13021 aagcgtaaaa cgtaaaaaga aatcagaagc tgcacgtaaa cgtaaattca aataattaat
    13081 acctctgttg actccctcaa cacgaatatt aattatataa aacaaacatc acaagttagt
    13141 gtctgacact aatatgtgat gtttttttgt tgtcaatttt taattaaaaa aagttatata
    13201 gtttataaat aatcaaattg atattctata ggttcttata actataaagt atattcaatt
    13261 tcatgtataa ttaatgtgag ggcgaggtga aattgtgagt tataataatt ttttacaaat
    13321 gacaactatc ttggaatcaa cggctggaga tacttgggtt gaacaagtta gtaatataat
    13381 tgttcaacct atttttacgt taatattaac ctgtttgaca ttcttaggat ttgtatatca
    13441 actttactct aaaaaaatca atgcagctgg tattatcgcc acattatcat tacttatttt
    13501 atttttggga tttctaatcc aaggaaatgt caatatgcat tctatcttaa tattctcaat
    13561 tggcgttata ttagttgtaa ttgaattatt tgtagttggt gcagtaattg gtattattgg
    13621 catgatactg ataactataa gcataacaac gctcggtgat aatttgctat ttatgcttgc
    13681 gaatgttatc gttgccttga ttttaacgat tgtagaatgg gtgatattag tgaagatttt
    13741 caacagaaag attccgtttt tggataaagt tatcttaaaa gattcaacta attctgagtc
    13801 aggttacaat tctcatgata accgctcgca cctcgtagga aagactgctc aaacagttac
    13861 agatcttcga cctgcaggga ttattttttg tgaaaatgaa cgtattgatg ctgtttcaga
    13921 tggcaacttt attttacgca ataaaacggt aaaaatcctt gaagttgaag gaacaagagt
    13981 agttgtgagg gaagtagatt aattaaaagg agcgatacca tgtttagttt aagttttatc
    14041 gtaatagcag ttattatagt agttgcatta cttattttat tctcatttgt accgattggt
    14101 ttatggattt cagcgttagc agctggcgtt catgttggta taggtacatt ggttggtatg
    14161 cgtttacgtc gtgtatctcc aagaaaagtt atagcgccat taattaaagc gcataaagca
    14221 ggactagcat taacaacaaa tcaattagaa tcgcattatc tagcaggagg aaatgttgac
    14281 agagttgttg acgctaatat tgctgcacaa cgtgctgaca ttgatcttcc tttcgaacgt
    14341 gctgctgcaa ttgaccttgc aggacgtgac gtattagaag cggttcaaat gtctgttaat
    14401 cctaaagtca ttgaaacacc atttatcgca ggtgtagcaa tgaacggtat tgaagtgaaa
    14461 gccaaagctc gtatcacagt tagagctaat attgctcgac ttgttggtgg tgctggtgaa
    14521 gaaacaatca tcgcacgtgt tggtgaaggt atcgtttcaa caattggttc tagtaagcat
    14581 catacagaag tacttgaaaa cccagataat atttctaaaa cagtattaag caaaggttta
    14641 gattcaggta ctgcatttga aattttatca attgatattg ctgacgttga tattagtaaa
    14701 aatattggtg cagacttaca aactgaacaa gcattagcag acaaaaatat tgcacaagca
    14761 aaagctgaag aacgtagagc tatggctgta gcaactgagc aagaaatgaa agcgcgtgta
    14821 caagaaatgc atgctaaagt agttgaagcc gaatctgaag tgccattagc tatggctgaa
    14881 gcattacgct caggcaatat cagtgttaaa gattattata atttgaaaaa tatcgaagct
    14941 gatacaggca tgagaaatgc aattaataaa cgaactgatc aaagtgatga tgagtcacct
    15001 gaacattaag tcgagaggtg attaaatgag tgtcggtatt ctaatttttg tcatatcagt
    15061 gatcatttct atcattacta ctatgcgcga aaatagtcat aaagatagac aaaatcaaaa
    15121 gccacctcaa aaaacatcta ccgataatga accaaaaaaa ggtggctttt ttgaagaaat
    15181 tgagcgaacg tttaaagaaa taagtgaaga attaaatgaa gaagaaaaga aatcatcgaa
    15241 acgaaaatat gatgatacgt taccaccttt attcgatgaa cttccaaagg aagagcctaa
    15301 atcgaaacct gttgtagaac ctatggcacc taaaaaacaa ccagaaacaa aaccgatgac
    15361 agagaaacca attacagtgc ctaaagcaga accggtggag cagaaacata gaccttctag
    15421 acaagataat tctgacgaaa ttagacgtca attagaaaaa tcacttagag atgatattaa
    15481 aacgattcgt actgacattg atagagaaaa agaaaagcaa attgctaaaa tggaaaaacg
    15541 tgctagagat attattgagg ataaatactt atctgaacgt acaaaacgtt tgaaattaaa
    15601 gcagttgctt aattctcaaa atgtcgaaaa agatttgact aaatcagcgt tccaatttga
    15661 taaagatgaa gtaatcaatg gtatgatatg gtcagaaatt ttagctaaac caaaacaatt
    15721 ataaaatttt t
//
LOCUS       DAKPJH010000061        15669 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.061, whole genome shotgun sequence.
ACCESSION   DAKPJH010000061 DAKPJH010000000
VERSION     DAKPJH010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15669
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.061"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(106..1398)
                     /gene="asnS"
                     /locus_tag="OY092_001645"
     CDS             complement(106..1398)
                     /gene="asnS"
                     /locus_tag="OY092_001645"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HCX1076588.1"
                     /translation="MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQ
                     GVVVKSEVDEEVFKLAKEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYP
                     ITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTAS
                     APEGTSELFHTKYFDQDAFLSQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEGEMAFTNHAESLEIQEQYVTHVVKSVLENCKLELKMLERDTSKLEKVATPFPR
                     ISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNP
                     ENEETVLCADLIAPEGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYYLDLRRYGS
                     VPHCGFGLGLERTVAWISGVEHVRETAPFPRLLNRLYP"
     gene            complement(1720..4413)
                     /locus_tag="OY092_001646"
     CDS             complement(1720..4413)
                     /locus_tag="OY092_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HCX1076589.1"
                     /translation="MGMATYAVVDLETTGNQLDFDDIIQIGITFVRNNQIIDTYHSMI
                     RTNLEIPPFIQALTSIEENMLQQAPYFNQVAQEIYDKIKDCIFVAHNVDFDLNFIKKA
                     FKDCNIQYRPKKVIDTLEIFKIAFPTDKSYQLSELAEAHGINLANAHRADEDAATTAK
                     LMILAFEKFEKLPLDTLKQLYYLSKQLKYDLYDIFFEMVRQYDAKPLDKSYEKFEQII
                     YRKQVDFKKPTTNYNGSLKSLYSKAVDQLGLTYRPQQLYLAETILDQLMHSEKAMIEA
                     SLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQSQLLEKDIPAMNEALNFKINALL
                     IKSKSDYISLGLISQILKDDTSNYEVNILKMQLLIWITETPSGDIQELNLKGGQKMYF
                     DQKIETYVPARHDVHYYNFIKRNAQNIQIGITNHAHLIHSDVENSIYQLFDDCIVDEA
                     HRLPDYALNQVTNELSYADIKYQLGLIGKNENEKLLKAIDQLEKQRILEKLDIAPIDI
                     FGLKASMNEIHELNEQLFSTIFTIINDSDVYDDDIHRFHNVFTFETKDILKDLHAIID
                     KLNKTLEIFNGISHKTVKSLRKKLLYLKDKFKNIEQSLKAGHTSFISIKNLSQKSTIR
                     LYVKDYAVKDVLTKQVLEKFKSLIFISGTLKFNHSFEAFKQLFNKDVHFNTFEVNTSL
                     QSAKNTSVFIPSDVASYQYKNIDEYVASIVSYIIEYTTITSSKCLVLFTSYKMMHMVQ
                     DMLNELPEFEDYVVLTQQQNQNYKIVQQFNNFDKAILLGTSTFFEGFDFQANGIKCVM
                     IAKLPFMNKHNAKYWLMDSEFTSTFKEYVLPDAVTRFRQGLGRLIRNENDRGIIVSFD
                     DRLINSNYKNFFEQTLENYRQKKGDIQQFGKLLRQIQKKKK"
     gene            complement(4437..5408)
                     /locus_tag="OY092_001647"
     CDS             complement(4437..5408)
                     /locus_tag="OY092_001647"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HCX1076590.1"
                     /translation="MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLK
                     LEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSL
                     VGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALG
                     IRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLD
                     DFDESIRHRATSIQLNDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASN
                     IWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF"
     gene            complement(5395..6597)
                     /locus_tag="OY092_001648"
     CDS             complement(5395..6597)
                     /locus_tag="OY092_001648"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499992.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HCX1076591.1"
                     /translation="MDKSLFEQARPILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDI
                     TTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTFRAEEDYVDHRRPSGVTFV
                     RDLYEDLQRRDFTMNAIAMDTAYKLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMI
                     RCLRFQSQLSFDIATETFEAMRTQMADIKFLSIERIVIELTKLMRGINVEESFNHLKS
                     LKAFNYMPYFEHLDMNQINVTEAIDLELLIAIASVKFDINYSLKPLKLSNRQVKDINQ
                     YIQIMNALPSIITKEQLKMFVYDYDTNLIKNVMVAADVLKANDIQGHEPLIVNLQTID
                     ETLHRLPMHNRKDMMVNGGVLMAHLNAKSGPWLKDVLRQIEIAIVTGKVSNEETEILK
                     WVDNHVKI"
     gene            complement(6602..7744)
                     /gene="bshA"
                     /locus_tag="OY092_001649"
     CDS             complement(6602..7744)
                     /gene="bshA"
                     /locus_tag="OY092_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HCX1076592.1"
                     /translation="MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIR
                     KPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGIL
                     AREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII
                     ETNKEIIPIYNFVRENEFPTKHNTALKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETF
                     AKVREKIPSKLILLGDGPELVPMRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLL
                     SEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVGDCDSASDYAIRLLE
                     DKALYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE"
     gene            complement(7982..8299)
                     /locus_tag="OY092_001650"
     CDS             complement(7982..8299)
                     /locus_tag="OY092_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HCX1076593.1"
                     /translation="MKSMVEMQREVDEYIGQFKTGYFSPLANLARLTEEVGELAREIN
                     HTYGEKKKKDSEEANTIKAELGDNLFVLLCLANSMGIDMTESFNETMEKFNTRDKNRF
                     ERK"
     gene            complement(8636..9316)
                     /locus_tag="OY092_001651"
     CDS             complement(8636..9316)
                     /locus_tag="OY092_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HCX1076594.1"
                     /translation="MIIYFVILMVLPLWAQHKVKSNYEKYSQVRSTSGKTGREVALEI
                     LHANGIYDVEVVKGEGFLTDHYDPKKKVVSLSPANYDRPSVAGTAIAAHEVGHAIQDH
                     QGYWFLRFRAALVPVANLGSSLSYMIIMLGIILTAIGSAFGSTALWIGAGLMSLAVLF
                     SIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATAVAVAELVRI
                     ILIARSSD"
     gene            complement(9388..9975)
                     /locus_tag="OY092_001652"
     CDS             complement(9388..9975)
                     /locus_tag="OY092_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HCX1076595.1"
                     /translation="MTINTFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPW
                     HFKIFVPDSPTAILYLVISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQ
                     GDITVNGLVLMFSHSIMAVQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYY
                     DFITTHVWQIGVLSCCLSVFGLLLYIELNKLLKCK"
     gene            complement(9965..10540)
                     /locus_tag="OY092_001653"
     CDS             complement(9965..10540)
                     /locus_tag="OY092_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HCX1076596.1"
                     /translation="MSETLNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANT
                     HFVDTKINHHETLEIAEVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFA
                     NVSKREQRLDDLIVAQLTESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMN
                     EKQRFYQLTQILNTLKLVNKHNQFEDLADDD"
     gene            complement(10554..11798)
                     /locus_tag="OY092_001654"
     CDS             complement(10554..11798)
                     /locus_tag="OY092_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000389522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076597.1"
                     /translation="MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYN
                     FGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLE
                     ADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
                     EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQE
                     AIKIMTTLLSKDPDYIQGYLYLQSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGC
                     LEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEAIIELLTYVDEGDLD
                     PTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIEIGQKEQAITIL
                     NQLLELEPSNENWHDELSRLQS"
     gene            complement(11805..13103)
                     /gene="aroA"
                     /locus_tag="OY092_001655"
     CDS             complement(11805..13103)
                     /gene="aroA"
                     /locus_tag="OY092_001655"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HCX1076598.1"
                     /translation="MVNEQIIDISGPLKGEIEVPGDKSMTHRAIMLASLAEGVSTIYK
                     PLLGEDCRRTMDIFRLLGVEIKEDDEKLVVTSPGYQSFNTPHQVLYTGNSGTTTRLLA
                     GLLSGLGIESVLSGDVSIGKRPMDRVLRPLKSMNANIEGIEDNYTPLIIKPSVIKGIN
                     YKMEVASAQVKSAILFASLFSKEPTIIKELDVSRNHTETMFRHFNIPIEAEGLSITTT
                     PEAIRYIKPADFHVPGDISSAAFFIVAALITPGSDVTIHNVGINPTRSGIIDIVEKMG
                     GNIQLFNQTTGAEPTASIRIQYTPMLQPITIEGELVPKAIDELPVIALLCTQAVGTST
                     IKDAEELKVKETNRIDTTADMLNLLGFELQPTNDGLIIHPSEFKTNATVDSLTDHRIG
                     MMLAVASLLSSEPVKIKQFDAVNVSFPGFLPKLKLLENEG"
     gene            complement(13113..14177)
                     /locus_tag="OY092_001656"
     CDS             complement(13113..14177)
                     /locus_tag="OY092_001656"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HCX1076599.1"
                     /translation="MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQ
                     YFADKFNDILSFGNVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGAT
                     GDFAGFIAATLLRGVHFIQVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPDAVIYD
                     LDFLNTLPFDEILSGYAEVYKHALLNGKSATHDIEQHFKDRASLQSLNGIDKYITKGI
                     ETKLNIVVADEKEQGVRKYLNLGHTFGHAVEYNHKIAHGHAVMIGIIYQFIVANILFN
                     SNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVV
                     QHVDQLTLQHACEQLKTYFK"
     gene            complement(14203..15369)
                     /gene="aroC"
                     /locus_tag="OY092_001657"
     CDS             complement(14203..15369)
                     /gene="aroC"
                     /locus_tag="OY092_001657"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HCX1076600.1"
                     /translation="MRYLTSGESHGPQLTVIVEGIPANLEIKVEDINKEMFKRQGGYG
                     RGRRMQIEKDTVEIVSGVRNGYTLGSPITMVVTNDDFTHWRKIMGAAPISDEERENMK
                     RTITKPRPGHADLVGGMKYNHRDLRNVLERSSARETAARVAVGALCKVLLEQLDIEIY
                     SRVVEIGGIKDKDFYDSETFKANLDRNDVRVIDDGIAQAMRDKIDEAKNDGDSIGGVV
                     QVVVENMPVGVGSYVHYDRKLDGRIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEI
                     LYNTELGYYRGSNHLGGLEGGMSNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKAT
                     IERSDSCAVPAASIVCEHVVAFEIAKALLEEFQSNHIEQLKQQIIERRQLNIEF"
BASE COUNT         4953 a         2882 c         2128 g         5706 t
ORIGIN      
        1 cgttatcaat cttcattttc caagcataaa tcgcccagct attaatatag gctggacgat
       61 tctttttatt atcataatat aaatattaag taacgatcct aaaacttatg gatataaacg
      121 gtttaataat cttgggaatg gcgcagtttc acgaacgtgt tcaacaccag aaatccatgc
      181 tactgtacgc tctaaaccta aaccaaatcc acagtgtggc acactaccat aacgacgtaa
      241 gtctaagtag taactatatg cttcttcgtc taatccatgt tctttaacgc gttgttctaa
      301 caattctaag tcatccacac gttcagatcc acctataatt tcaccgtatc cttcaggtgc
      361 aattaagtct gcacataata cagtttcttc attttcagga tttggttgca tatagaaagg
      421 cttaatttta gttggataat tagtaataaa caccggtaaa tcataatgat tagcaatggc
      481 tgtttcatgt ggcgcaccaa aatcttcgcc ccattcaata tcatcaaagc cttctgcttt
      541 taagaattca attgcatcat catatgaaat tctagggaat ggtgtcgcaa ctttttcaag
      601 ttttgatgta tcacgctcta acattttcaa ctctagttta caattttcta aaactgattt
      661 tacaacatgt gttacatatt gttcttgaat ttctaaactt tcagcatgat ttgtgaaagc
      721 catttcccct tcaatcatcc agaactcgat caagtgtcta cgtgtttttg atttttcagc
      781 tctgaaagtt ggaccaaatg aaaatacttt tccgtgtgcc atagctgcag cttctaagta
      841 taactgacca ctttgagata aaaacgcatc ttgatcaaag tatttagtat ggaataattc
      901 acttgtacct tctggcgcac ttgctgtcaa aattggtgga tcaacctttg taaatccatc
      961 tttgttgaaa aattcatacg ttgcacgaat aacttcattt ctaattttca ttacagcatg
     1021 ttgtttttta gaacgtaacc ataaatgacg gtgatccatt aagaattctg taccatgatt
     1081 tttaggtgta atcggatagt catgcgcttc tgaaataact tcaattgatt tcacttgcat
     1141 ttcgtatcct aagtcagaac gattatcttc tgtaattgtg cctgtaacat atagagatga
     1201 ttcttgagta atttctttcg caagtttgaa tacctcttca tcaacttctg atttaactac
     1261 tacgccttgc ataaagcctg ttccatcacg taattgtaaa aaggcgattt taccacttga
     1321 acgtttattt gttagccaag caccaattgt aacgtcttgg tttaaatgat ctttcgcttg
     1381 tttaatcgtt gttttcataa ccattctcct atttattttt tcgttataca atactcattc
     1441 attttaacaa aatccgcttt caagttctag aactagacta aaagataacg tgtaaatggt
     1501 aatgatttaa gcacagattt gaacattaat ttatattaag acaatacaat catcagtttc
     1561 agacaaaata tataataaat cctcaatatt attagtatga aggtcgtttt ttgtgctaac
     1621 attcaagttt aattataaaa ctcaaatttt gacgaccaaa caaaaattct tgtaacagaa
     1681 catagcacat gtcatgtcac aagaatttta ctttgtattt cactttttct ttttttgaat
     1741 ttgtcttaat aattttccaa actgttgaat gtcgcctttt ttctgacgat aattttcaag
     1801 tgtttgttca aaaaagtttt tataattact gtttatgagt cgatcatcaa atgaaactat
     1861 tatgccgcga tcattttcat ttctaattaa tcttccaagt ccttgtctaa aacgtgtaac
     1921 tgcatcaggt aatacatatt ccttgaaagt tgaagtgaat tcagaatcca taagccaata
     1981 ttttgcatta tgcttgttca taaacggtaa cttcgctatc atcacacatt taataccatt
     2041 tgcttgaaaa tcaaaacctt caaaaaatgt tgacgtacca agcagtatgg ccttatcaaa
     2101 attattaaac tgttgtacta ttttataatt ttggttctgc tgttgtgtta atacaacata
     2161 atcttcaaat tctggcaatt catttagcat atcttgtacc atatgcatca ttttataact
     2221 cgtaaataag actaaacatt ttgatgacgt tatagtcgta tattcaataa tatagcttac
     2281 aatcgatgct acatactcat ctatattttt atattgataa gatgctacat cactcggtat
     2341 aaatacactt gtattttttg cactttgtaa cgacgtgtta acttcaaatg tattaaagtg
     2401 aacatctttg ttgaataact gtttaaaagc ttcaaacgaa tgattaaatt ttaaagtacc
     2461 agatataaaa atgagtgatt taaatttttc caatacttgt ttcgttaata catcttttac
     2521 agcgtaatct ttcacatata aacgtattgt tgatttttga gataaatttt taattgaaat
     2581 gaaactagta tgtccagctt ttaaactttg ttcgatattt ttaaatttat cttttaaata
     2641 caacaacttt ttccgtaatg atttaactgt tttatgacta atgccattga atatttctag
     2701 cgttttattt aacttatcga taatcgcatg taaatccttc aaaatgtctt ttgtttcaaa
     2761 agtaaataca ttatggaagc gatgaatatc atcatcataa acatcagaat cattgataat
     2821 cgtaaatatc gttgaaaaca attgctcatt taactcatga atctcattca tactagcctt
     2881 caagccaaaa atatcaattg gtgcaatatc taacttttcc aaaattcgct gcttttccag
     2941 ttgatcaatt gcctttaaca atttttcatt ttcgttttta ccaatcaaac caagctgata
     3001 tttaatatca gcataactca actcatttgt cacttgattt aaggcatagt ctggtaagcg
     3061 atgtgcttca tccactatac aatcatcaaa caattgatat attgaatttt caacatcaga
     3121 atgaattaaa tgtgcatgat ttgtaatacc aatttgaatg ttctgtgcat ttcgcttaat
     3181 aaaattataa taatggacat cgtgacgtgc cggtacatat gtttcaattt tctggtcaaa
     3241 atacatcttt tgaccacctt ttaaatttaa ttcctgtata tctccggacg gcgtctctgt
     3301 aatccaaatc agcaattgca ttttcaagat attcacttcg tagttacttg tgtcatcttt
     3361 taaaatttga ctaataagcc ccaatgaaat gtaatcactt ttacttttaa tcaatagtgc
     3421 attaatttta aaatttaacg cttcattcat tgctggaata tctttttcta acaattgact
     3481 ttgcagtaat ttggtattgg tagaaatcat aacatgcttt ccagtttcaa tattatacat
     3541 caaggccgca agtaaatatg ctaatgattt accactgcct agtgatgctt caatcattgc
     3601 tttttcacta tgcatgagct gatctaatat agtttccgct aaatataatt gctgcggtcg
     3661 atatgttaag ccaagttgat ctacagcttt gctatataaa gacttcaagc tgccattata
     3721 atttgttgtc ggctttttaa aatcaacttg cttacgatag ataatctgtt cgaacttttc
     3781 gtacgattta tccaatggct ttgcatcata ttgcctaacc atctcaaaga aaatatcata
     3841 caaatcgtat ttcaactgtt tacttaaata atataattgc tttaaagtat ctaacggtaa
     3901 cttttcaaat ttttcaaaag ctaatatcat caatttagca gtagtagcgg catcctcgtc
     3961 agctcgatgg gcatttgcta agttaatacc atgtgcttct gctaattcac ttaattgata
     4021 acttttatct gtaggaaaag ctattttaaa gatttctagt gtatctataa cttttttggg
     4081 acgatattga atattacaat ctttaaatgc ctttttaata aaatttaaat caaaatctac
     4141 attatgagcg acaaaaatgc aatcttttat cttatcgtag atttcttgtg caacttgatt
     4201 aaaatatggc gcttgttgta gcatattttc ttcaatggat gttaacgctt gaatgaatgg
     4261 cggaatctct aaatttgttc taatcataga atgatatgta tcaataattt ggttattgcg
     4321 cacaaacgtt ataccaattt gaatgatatc gtcaaaatct aattggttgc ctgttgtttc
     4381 caaatccaca acggcatagg ttgccatacc catagctatc tctccttgct ttagtgttaa
     4441 aaatctatat ctgcactaat taaacggtgt gattcacccg cttcatctct aacaattaga
     4501 tagccatcgt aatctaaatc aattgcttgt cctttaaact gtttatcatt ttctgtaaat
     4561 agcaacgttc tattccaaat attagaagct gcaatatatt cttcacgaat ttcagaaaaa
     4621 ggtaacgtta aaaattgatt atatcttttt tcaatttctt gaagtaatct ctctaaaaat
     4681 tgatatctat ctaatttatt tttatcattt aattgtatac ttgttgctct atgtctaata
     4741 ctttcatcaa agtcatctag ttgttgcgtc aaattaatac ctataccaca tattattgct
     4801 tctataccat cattattagc aaccatttca gttaagaaac cacacacttt accattatca
     4861 atatatatat cattcggcca tttcactttg acttcatctt gactaaaatg ttgaatcgca
     4921 tctcttatcc ctaatgcaat aaataaatta aatttagata tcattgagaa tgcaacgtta
     4981 ggtcttaaca cgacagacat ccaaagtcct tgcccttttg aagaactcca atgtctatta
     5041 aatcgcccac gacctttcgt ttgttcatca ctcaagataa aaaatgaaga ttgatttcca
     5101 acaagtgact ttttcgcagc aagttgtgta gaatctattg aatcgtatac ttcactaaaa
     5161 tcaaacaaag cagaactttt tgtatattgg tctattatac cttgatacca aatatctggg
     5221 agctgttgta ataaatgccc tttatgattt actgaatcta ttttacatcc ctctaatttt
     5281 aattggtcaa tcactttttt tactgcagtg cgcgatatat taagtgattc cgcaatgctt
     5341 tgtccagata tataattcgg tttattttta tagagtaatt gaagtacatc ttgactatat
     5401 tttgacatga ttatccaccc atttcaaaat ttcagtttct tcgttgctta ctttacctgt
     5461 tacaatcgct atctcaattt gtcttagcac atcttttaac catggaccac ttttggcatt
     5521 taaatgtgcc ataagtacac cgccattaac catcatgtct tttctattat gcataggtaa
     5581 acgatgtaat gtttcatcaa tcgtttgaag gttaacgatt aatggttcat gtccttgaat
     5641 atcatttgcc tttaacacgt ctgctgcaac cattacattt ttaatgagat tcgtatcata
     5701 atcataaaca aacattttta attgttcttt tgtaataata cttggtaatg cattcataat
     5761 ttgaatatat tgattgatat cttttacttg tcggttactt agctttaaag gcttcaatga
     5821 gtaattaata tcaaatttaa ctgatgctat agcaatcaat aattctaaat caattgcttc
     5881 agtcacatta atttgattca tatcaagatg ttcgaaatat ggcatataat taaatgcttt
     5941 cagcgatttt aaatgattaa aactctcttc aacattaata cctcgcatta atttagttag
     6001 ttcaatcact atacgctcaa ttgataaaaa tttaatatct gccatttgtg tacgcatcgc
     6061 ttcgaatgtt tccgttgcaa tatcaaatga taattgtgac tggaatctta aacatcgaat
     6121 catacgtaaa gcatcttctt ggaatcgttc ctcagctata cctacagttc ttattattcg
     6181 attattaata tcttgttgac catcaaaata atcatacaat ttgtatgctg tatccattgc
     6241 tatcgcattc atcgtgaaat ctcttcgttg caaatcttcg tataaatcac gaacaaatgt
     6301 aacaccactt ggtctacggt gatcgacata atcttcttca gcccggaatg ttgtcacttc
     6361 ataattttca tcattaaaaa ctacatttat cgtgccatgt tctttaccta caggtatcgt
     6421 atgactaaag attgattcta tttcatccgg cgttgcactt gttgtgatat ctatatcatg
     6481 aatatttctt cccatgacat aatctcttac agagccacct acataatatg cttcaaaacc
     6541 attgtcttga atttgttcta atataggcct tgcctgttca aataatgatt tatccatatt
     6601 attactcgcc tttacttttg ttatgttcat ttagcatttt ttgataataa tactcatatt
     6661 gatctgtaat gagttctgat ccaaaacgtt cagcaatatc tgctagcatg tttttctgaa
     6721 gtttgttgta taacgcctta tcttcaagta atcggatagc atagtcactc gctgaatcac
     6781 aatcacccac atctacaaca aatccagttt caccatgttt aataacctct ttaattccac
     6841 cggcatttga accaattgga acgacgcctg ttttcatagc ctcaagtaaa gttagtccaa
     6901 agctttcttt ttcacttaat aataatacta agtcagataa ttgataaaat tcacttacgc
     6961 aatcttgctt ccctaaaaat aaaacatcct cttctacgtt taactctttc gtcaattgac
     7021 gcattggcac taattcagga ccatctccaa gtaaaattaa tttactaggt atcttttcac
     7081 gtacttttgc aaatgtttct ataatagtat ctatgcgttt tacttgtcta aaattcgata
     7141 catgtattaa cactttttca tctggtgcta taccaaattg tgattttagt gctgtgttat
     7201 gtttagttgg aaactcattt tcacgtacaa aattataaat cggtataatt tctttgttag
     7261 tttcgataat ttcatgtgtt tcttgcgcta aagatttact cacacttgtc acaatatcac
     7321 ttttttcaat gccaaattta attgcacctt ggagtgaatg atcatagccc aaaacagtaa
     7381 tatcagtacc gtgtagcgtt gtcataattt ttatatcttt acctgacatc tcacgagcta
     7441 aaataccaca aattgcatga ggtacagcat agtgcatatg caacaaatca agatcatatt
     7501 ctttaataac ttcagcgatt ttagtactta acgtaatatc atacggtgga tattgaaata
     7561 ctgcatattg attcacttca acttgatgaa aaatcatatt cggtaatggt tttcttattc
     7621 taaacgggat atttgaagtg ataaaatgta cttcgtgacc tcgctctgct aatttaattc
     7681 ctaattctgt ggcaataatt ccagaaccac ccatggacgg gtaacatgtt atacctatct
     7741 tcattcgctt gcccatcctt tctttctatt tctattattc tcgatgcgta gataattgtt
     7801 taaatttaag tttatagtaa tgttgagttt ataatttcaa atatctaaaa aacaggtgtt
     7861 gtatatataa tcattcatct agttatactt actttaaaaa taatatgatt tcatgcgatg
     7921 caattcattg atggatgttt ttaatcttaa tcaaatccaa ataaagcata tatttttata
     7981 ttcactttct ttcgaatcga tttttatctc ttgtattaaa cttttccata gtttcattaa
     8041 agctctctgt catatctatt cccattgaat tcgctaaaca taacaacaca aataaattat
     8101 cacctaattc tgctttaatc gtatttgctt cctctgaatc tttcttcttt ttttcaccat
     8161 aggtatgatt tatttcacgt gcaagttcgc ccacttcttc agtcaatcta gctaagttag
     8221 ctaatggtga aaaatatcct gttttaaatt gtccaatata ttcatcaact tcacgttgca
     8281 tttctaccat tgatttcatt tctacgttct ccttatattg catttctaat atagtatata
     8341 tcaatttgaa gtctcatgca tgtttagtgc aatctactga ctctagctaa actagatgac
     8401 aagttgttta ttttagaagt ttaataattc agtttatata aatgtaatgc attcctaact
     8461 aaattaaatc aattgaaatt gggattataa ctttatgata cgtactacta caataaaata
     8521 atatagtgaa taatctacca tgagaaaaat aagcacaaaa aaactagcaa ccacacaaaa
     8581 atgtgattag ctagttaata agtgtctaat ttaagttaat tgttaatcta taagattaat
     8641 cacttgaacg cgcaatcaaa ataatacgta caagctctgc tacagcgaca gcagttgctg
     8701 caacataagt cattgctgct gcagataata ctttacgcgc atgcttgtat tctttttcat
     8761 ttacaatgtt caatgccgta atttgtttca tcgctcttga actcgcatca aactcaactg
     8821 gtaacgtaac aattgagaat aataccgcta atgacattaa accagcacca atccataaag
     8881 cagttgaacc aaatgcacta cctatcgctg ttaagataat acctaacatg atgatcatat
     8941 aacttaatga actccctagg tttgcaacag gtactaatgc tgctctgaat cttaagaacc
     9001 aatatccttg gtgatcttga atggcatgac caacttcgtg ggctgcaatt gcagttccag
     9061 caactgatgg tctgtcatag tttgcaggag atagtgaaac aactttcttt ttaggatcgt
     9121 aatgatctgt taagaatcct tcacctttaa caacttcgac atcataaata ccgtttgcat
     9181 gtaaaatttc taatgcaact tcacgacccg ttttaccact agttgatcta acttgtgaat
     9241 atttctcata gttagattta actttgtgtt gtgcccataa aggaagcacc attaatatta
     9301 cgaaataaat tatcatagta aaaattgaag acaataaact cactctcctt tataaatatt
     9361 ttactgtcat ttgccgtttt tatcaaatca tttacacttt aataatttgt ttaattcaat
     9421 ataaagcaaa agtccaaaaa cacttagaca acatgataat acaccaattt gccacacatg
     9481 tgtagttata aaatcataat atggaaattg aaggtgaaaa tagtcaatat aatcattcaa
     9541 aaatacccaa atcatcgcta cactgattcc aatcatagaa cgtttaaacc taggatagaa
     9601 gtaaattgcc tgaacagcca ttatactgtg ggaaaacatt aataccaaac catttactgt
     9661 aatatcacct tgttcaataa taaataatat attcattata actgcccaaa tcccatattt
     9721 gaataatgtt acaaatgcca gtgcatcgat aatactattt tgtttttgaa ttaatatcaa
     9781 tgagatagaa ataactaagt ataatattgc agttgggcta tctggaacaa aaatcttaaa
     9841 atgccacggc gtatgactta attgttcacc ataccatata taaccataaa tcatccctaa
     9901 tatattacaa atgagtagca tcattaacca agaacgttga taaagtgtat attgccaaaa
     9961 tgtattaatc gtcatctgct aagtcctcaa attgattatg tttatttact agcttgagtg
    10021 tatttaaaat ttgcgttagt tgataaaaac gttgcttttc attcatctgt aaacttaaat
    10081 caatattgtg taacaagtaa tctattaata acgcatgttt atgccgatct atagccatac
    10141 tatttaagtc atgaagataa gtttgataac tgggcgattc cgttagttga gcaactatta
    10201 aatcatctag cctttgctca cgctttgaca cgtttgcgaa gtgaatttga atatcaaaag
    10261 cacagttatg attagcgata taatcaaata tttcatttgt attcattaac tttatattac
    10321 gcttagtaaa ttgaattgca gaagcgtgac ttcccacttc tgcaatttct aatgtttcat
    10381 gatgattaat ttttgtatct acaaaatgag tgtttgccaa tttcgcctca ttcactttta
    10441 tatagttaag cacccaaact gcaatacgcg acttaaatcg atattgaaaa agtaaatatt
    10501 caataaaact ttctttaatt tgattgagtg tctctgacat caaatacccc attttaagat
    10561 tgcaatcttg ataattcgtc atgccaattt tcgttacttg gctctagttc caacaattga
    10621 tttaaaatag taattgcttg ttccttttga ccaatttcaa ttaaatagaa ataataatca
    10681 ctcataaaat caatatttgt tttcatcgtt ggatatgcta attcaaagaa atgttgagct
    10741 tctttatctc gctcttcttg accataggcg aacgctaaat gccacatgaa tgtaggatcc
    10801 aaatctcctt catctacata tgttaataat tcaatgattg cttcataatc ttcttcatta
    10861 cgatataaat cgcttaaaat caataaaggt tcttggtaag cattatcaac ctctaatgct
    10921 tgttttaaca ataatacacc ttcattagca tcgccgtgtt ctatttccaa acatccagtt
    10981 gtatacatta actctttata aaattgactt agtcgtaatc cttctttacc cgtttcaata
    11041 gcatctggat aatttttttc attttcatat aatgattgta aatacaagta gccttgaata
    11101 taatcaggat ctttagaaag taatgtagtc attattttaa ttgcttcttg agtgatgtca
    11161 tttttatcgt aagaaatggc ttttttgaga taatcttctg aagtcatttc atcttcatta
    11221 atttcatcgt ataagcgaat cgcatcacta tagttaccac tttgtaaact acaatctgcc
    11281 atacgagaga ataagtttac accattaact tgatattcac cagtttctaa aacggtttcg
    11341 tattcagagg tagcacgtaa atattgacca tcataatata acatttcagc caatgcaaaa
    11401 tggattattg gatcatttgg ctctagttca agtgcttctt gtaatttatc aatagcaact
    11461 tccatcatat taatttgttg atataaatct gcttctaaca tcaacttttc aggtgatggt
    11521 tcaacataac ttaaatattc taacgcttcg tcagtttgat tttcagacat taaaccttca
    11581 ataaaataaa tcagcaattc actttcgtct ggatatttgt gatataacac gcggaatact
    11641 tccaaacctt gtggcattaa tccaaaattg taaagtgtct ctcctagaat aaataatgcg
    11701 tcatcgttgt cagtagttat tgcttcatta acacgagagt ctaaattttc tagtttttgt
    11761 agattgatat cgtctattaa tttatagata tcttccattt tatattatcc ctcattttct
    11821 aaaagcttta gttttggtaa aaatcctgga aatgatacat ttacggcatc aaattgtttg
    11881 attttgactg gctcgcttga aagtagagaa gcaactgcaa gcatcattcc tattcgatga
    11941 tcagttaaac tatcaactgt tgcatttgtt ttaaattctg acggatgaat aatcaatcca
    12001 tcattagttg gttgtaattc aaaccctaac aagtttaaca tatcagccgt tgtatcaatt
    12061 ctatttgttt cttttacttt taattcctcg gcatctttaa ttgtactcgt gccaactgct
    12121 tgtgtacaaa gtaatgctat tacaggcagt tcatcaattg cttttggcac taattctcct
    12181 tcgattgtta ttggttgaag cattggtgtg tattgtatac gaatagaagc agtaggttca
    12241 gcaccagttg tttgattgaa aagttgaata ttaccgccca ttttttcaac aatatcaata
    12301 atacctgaac gtgttggatt gattccaaca ttatgaattg ttacatcact tcctggtgtg
    12361 ataagtgctg caacaataaa gaacgctgca gatgaaatat cgccaggaac atgaaaatct
    12421 gcaggtttaa tgtatcgaat tgcttcaggg gttgtagtaa ttgataaccc ttctgcttca
    12481 attggaatat taaaatgtct gaacatcgtc tcagtatgat ttcgacttac atctaattct
    12541 ttaatgatgg tcggttcctt agaaaataga cttgcgaata agatggcact tttcacttgt
    12601 gcacttgcca cttccatctt gtaattaata cctttaatta cagacggttt aatgattaat
    12661 ggggtgtaat tgtcttcaat tccttcaata tttgcattca tactttttaa cggtcttaaa
    12721 acacgatcca tcggcctttt acctatggaa acatctccag acaagacact ttcaatacct
    12781 aaaccactta acaaacctgc caataatcgt gttgtcgtac cagaattacc tgtatacaat
    12841 acttgatgtg gcgtgttaaa agattgatat cctggggaag tcacaactaa tttttcatca
    12901 tcttctttga tttctacacc taacagtcgg aaaatgtcca tcgtacgacg acaatcttcg
    12961 ccaagtagtg gcttatatat agtagataca ccttcagcta gcgacgccaa catgattgca
    13021 cggtgtgtca ttgatttatc gcccggcact tctatttcgc cctttaacgg acctgaaata
    13081 tcaatgattt gttcatttac catttcattc acctacttaa aatatgtttt taattgttca
    13141 catgcatgtt gtaatgttag ttgatcaaca tgttgtacaa cgatatctcc aaaatgttta
    13201 atcaagacca tttgtacacc ttgcttatca ttctttttat cacttagcat gtattgatat
    13261 atcgtttcga aatctatgtc ggttattgtt tctaaaggat aacctaattt cgttaaataa
    13321 ttaatataat gttggatatc gtgattagaa ttgaacaata tattcgcaac aataaattga
    13381 tatattatgc ctatcattac ggcatgaccg tgtgcaattt tgtggttata ctccacggca
    13441 tgaccaaatg tatgtcctaa atttaaatac tttcgaacac cttgctcttt ttcatcagca
    13501 acaacgatat ttaattttgt ttcaatgcct ttagttatat atttatcaat tccatttaat
    13561 gattgtaatg acgctcgatc tttaaaatgt tgctcgatgt catgtgtagc agatttacca
    13621 tttaataagg catgcttata tacttccgca tagccactca atatttcatc aaatggcaaa
    13681 gtatttaaaa agtctaagtc ataaattaca gcatctggac gataaaatgc accgataagg
    13741 tttttacctt gctttgagtt aatacccact ttaccgccaa cgctagaatc atgcgctagt
    13801 atagtcgttg gcacttgtat aaagtgaaca cctcgtaaaa gtgtcgccgc aataaatcct
    13861 gcaaaatctc ctgtcgcacc accaccaaca gctataatcg ctgtattacg cgttacatga
    13921 tgtgacaaaa tgtattctaa tgtttcttga tattgctcaa atgttttcgt cttttcacca
    13981 gctggaataa taactttatg tacatttcca aaagataaaa tatcattaaa tttatcagca
    14041 aaatattgat ttacatgctc gtcaattaat ataaaacttt gatcaaactg atcaatatac
    14101 gtgctaatat ggtcaattgc accatgttca acaaatattg gataattgtt tgaaggatag
    14161 gttgtttgta atttcatgat cacacctcaa ttgttcttgt tgttaaaact caatatttaa
    14221 ttgtctgcgc tcaataattt gttgtttaag ttgctcaata tgatttgatt ggaattcttc
    14281 caataatgct ttcgcaattt caaatgctac gacatgttcg cagacgatac ttgctgcagg
    14341 aacagcacaa ctatcagaac gttcaattgt tgccttaaag tcttctttag tatttatatc
    14401 aactgaattt aatggtttat ataacgtagg aataggtttc attacaccat taacgataat
    14461 tggcattcca tttgacatac cgccttctaa accacctaag tgatttgacc cacgataata
    14521 gcccaattca gtattgtaga gaatttcgtc ttgaatttcg ctaccaggct tttcagctgc
    14581 tttaaatcct tctccaaaac ttacaccttt aaatgcatta atactaacga caccctgtgc
    14641 tattcttcca tctaatttac gatcataatg tacataacta cctacaccaa caggcatatt
    14701 ttcaactaca acttgaacta cgccccctat tgaatcacca tcgtttttcg cttcatcaat
    14761 tttatcgcgc attgcttgtg cgatgccatc atcaattaca cggacgtcat ttcgatcaag
    14821 gtttgcttta aatgtttctg aatcataaaa atctttatct ttaatgccac ctatctcaac
    14881 aacacgactg tatatttcga tatctaattg ttctaataaa actttgcata atgcaccgac
    14941 agctacacgt gctgctgttt ctctggcaga tgaacgttct aatacatttc gtaagtcacg
    15001 atgattatat ttcataccgc caactaaatc tgcatgtccc ggtcttggct tcgtaattgt
    15061 acgtttcata ttttctcgtt cttcgtcgct tattggcgca gcacccataa tttttcgcca
    15121 atgtgtaaaa tcatcattag taacaaccat tgtaataggg ctacctaatg tataaccatt
    15181 tctcacaccc gaaacaatct ctactgtatc tttctcaatt tgcatgcgtc ggccacgacc
    15241 ataaccacct tgacgcttga acatttcttt attaatatct tcaactttaa tttctaaatt
    15301 tgctggtata ccttcgacaa taactgttaa ttgaggtcca tgtgattctc ctgaagttag
    15361 atatctcata cacactcgct cctttcatac ttccgcaata acattataat atgttgttaa
    15421 tcttatcaca ttcattgtgg attcataaat gtttgttttc aagcttaatt aagaaaatgg
    15481 atgacatctc attttaaatg tcagaattat cttaatatta aacgaactaa aattaattat
    15541 aatatattcg tctgtagaaa agtatcatga atttctaaac agttgcatca tataatcatt
    15601 aattaaaaat gattagccgt tttaatataa tcgtatcgca actttagcaa ataatatact
    15661 gactacatt
//
LOCUS       DAKPJH010000062        15202 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.062, whole genome shotgun sequence.
ACCESSION   DAKPJH010000062 DAKPJH010000000
VERSION     DAKPJH010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15202
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.062"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(91..924)
                     /locus_tag="OY092_001658"
     CDS             complement(91..924)
                     /locus_tag="OY092_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCX1076601.1"
                     /translation="MEVKTFYNGNTMPKIGLGTFRVENDENCMESVKYAIEQGYRSID
                     TAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGL
                     KYLDLYLVHWPGTNEAVMVDTWKGMEDLYKNNKVKNIGVSNFEPEHLEALLAQVSIKP
                     VINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQILNDEAIKDIAQELGKSPAQV
                     VLRWNVQHGVVTIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFE
                     G"
     gene            complement(1141..2049)
                     /locus_tag="OY092_001659"
     CDS             complement(1141..2049)
                     /locus_tag="OY092_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HCX1076602.1"
                     /translation="MDLSSPIVIGLIIAVVIALIFFVLFLVALGSKKKVKRQTEEKYE
                     QQEQNIKKSHEEALEKERIQNKKTITKQQEDYNHMVSTKDREIDALKLFSKNHSEYVT
                     DMRLIGIRERLVKEKRIRPEDMHIMANIFLPKDGFNNIERISHIVLTRTGLYIIDSQL
                     LKGHVYNGISGGQFKDLPPMEQVFDTLDLDKSRPQTIVMDQNDDKRSLSFVNYSDQIE
                     AIKQLAEDLQKELGAKYTPTSILYFNPKNEGDVTISNYNQNSAVKVLVGAEQLDEFFN
                     KFVFHGRIQYNVEDLQQMMDKIESFN"
     gene            complement(2174..3367)
                     /locus_tag="OY092_001660"
     CDS             complement(2174..3367)
                     /locus_tag="OY092_001660"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HCX1076603.1"
                     /translation="MLNNKRLFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVAC
                     ETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQS
                     PDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKR
                     LSDVRKDGTLNYLRPDGKVQVTVEYDENDNPVRIDTIVVSTQHAEDVTLEQIQEDIKA
                     HVIYQTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCF
                     SGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKV
                     SEGQLVEAVRKHFDLRPAGIIKMLDLKQPIYKQTAAYGHFGRTDVLFPWEKLDKVEEL
                     KDAVK"
     regulatory      complement(3473..3583)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            3738..5330
                     /gene="pckA"
                     /locus_tag="OY092_001661"
     CDS             3738..5330
                     /gene="pckA"
                     /locus_tag="OY092_001661"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HCX1076604.1"
                     /translation="MSVDTYTETTKIDKLLKKPTSHFQLSTTQLYNKILDNNEGVLTE
                     LGAVNASTGKYTGRSPKDKFFVSEPSYRDNIDWGDINQPIDEETFLKLYHKVLDYLDK
                     KDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVS
                     APHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMS
                     MHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAK
                     AINLSKEKEPQIFDAIKYGAILENTVVAEDGSVDFEDNRYTENTRAAYPINHIDNIVV
                     PSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSF
                     STCFGAPFFPLHPTVYADLLGELIDLHDVDVYLVNTGWTGGKYGVGRRISLHYTRQMV
                     NQAISGKLKNAEYTKDSTFGLSIPVEIEDVPKTILNPINAWSDKEKYKAQAEDLIQRF
                     EKNFEKFGEKVEHIAEKGSFNK"
     gene            complement(5708..6454)
                     /locus_tag="OY092_001662"
     CDS             complement(5708..6454)
                     /locus_tag="OY092_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HCX1076605.1"
                     /translation="MPIESFTHQLEEITYLSDDLQVKALMMTPHHEVKRIVVYLRGGK
                     GQVGRVRAGRLMQFSDSQTLVIGPYYRGNNGSEGKDEFYRGDLNDVTELLRLLHDKYP
                     QAFIHMVGFSRGGLQGLLTFQDLPVNSYIIWGGVSDIDLMYEERVDLRGMLRRMIGHP
                     KKDRAAYEARQAIPNINENSPPILIVHGGKDQQVGIHHAYYLADQLELKGATHETFYQ
                     MAEGHVPRPPAMVETLTYIKEFMNQVELHS"
     gene            complement(6459..6932)
                     /gene="ytkD"
                     /locus_tag="OY092_001663"
     CDS             complement(6459..6932)
                     /gene="ytkD"
                     /locus_tag="OY092_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HCX1076606.1"
                     /translation="MKFRDKDNRQVNLTFKKDNEVADGNHVLAIPTFKNQLLFTKHNL
                     RGIEFPGGKRERGESSAEAVTRELYEETGAKVKNIHYIAQYTIETHDQTDFVKDVYFI
                     EVESLVSKNDYLETAGPVLFNCINDIELTQRSFLLQDSTILKCVERVQSLGFYQT"
     gene            6998..7255
                     /gene="yidD"
                     /locus_tag="OY092_001664"
     CDS             6998..7255
                     /gene="yidD"
                     /locus_tag="OY092_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HCX1076607.1"
                     /translation="MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAF
                     KGLYLGIRRILKCHPLHKGGFDPVPLKKDKSESKHSHKHNH"
     gene            complement(7252..8253)
                     /gene="menC"
                     /locus_tag="OY092_001665"
     CDS             complement(7252..8253)
                     /gene="menC"
                     /locus_tag="OY092_001665"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HCX1076608.1"
                     /translation="MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAY
                     FGECNAFQTDWYDHETIASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARAT
                     IVMALYQIFHVLPSFSVAYGATVSGLSNKQLESLKATKPARIKLKWTPQIMHQIRVLR
                     ELEFHFQLVIDANESLDRQDFTQLQLLAREQVLYIEEPFKDISMLDDVVDGTIPPIAL
                     DEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGVKVVIGGMYEYG
                     LSRYFTAMLARKGDYPGDVTPAGYYFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY"
     gene            complement(8258..9736)
                     /gene="menE"
                     /locus_tag="OY092_001666"
     CDS             complement(8258..9736)
                     /gene="menE"
                     /locus_tag="OY092_001666"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HCX1076609.1"
                     /translation="MDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY
                     QQSRVGLYIDNSIQSIILIHACWLTNIEIAMINTRLTPNEMTNQMKSIDVQLIFCTLP
                     LELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNILNTSFNL
                     DDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLS
                     VLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQK
                     ILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANV
                     DVKIKNPNKEGHGELMIKGANVMNGYLYPTDLTGTFENGYFNTGDIAEIDHEGYVMIY
                     DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK
                     AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKLYRG"
     gene            complement(9895..10350)
                     /locus_tag="OY092_001667"
     CDS             complement(9895..10350)
                     /locus_tag="OY092_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4909 domain-containing protein"
                     /protein_id="HCX1076610.1"
                     /translation="MKICLMLYLLIFLSSCGTNNKIVGQRFEIQQHNETIGSIYFSAD
                     YAHIRGIEKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYL
                     IENLDDEVFHLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN"
     gene            10652..11301
                     /locus_tag="OY092_001668"
                     /pseudo
     CDS             10652..11301
                     /locus_tag="OY092_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500419.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
     gene            11382..12377
                     /locus_tag="OY092_001669"
     CDS             11382..12377
                     /locus_tag="OY092_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HCX1076611.1"
                     /translation="MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGC
                     GGCLVLFILIIIGISACTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETM
                     KSVGPSLAPTNAKGTFVVADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSAN
                     QSDNGSIENSFFLQRINPDSTAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDL
                     SEAKKTSKAKKDKQDTEVAVASSNSDNISYEASATTPATTSSADTDSEDSEKSSKDED
                     KQNASKSDKSSVEKSESNEETAPVEPMRQSKPTTSEAPPSQNIHNEDSMYDASTE"
     gene            12453..13079
                     /locus_tag="OY092_001670"
     CDS             12453..13079
                     /locus_tag="OY092_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076612.1"
                     /translation="MKFKAIVAITLSLSLLTACGANQHKENNSKSNNTNKKTQQTDNT
                     TKSNTDKQMTPQEAEDIVRNDYKARGANENQTLNYKTNLERSNEHEYYVEHLVRDAVG
                     TPLKRCAIVNRHNGTIINIFDDMSEKDKEEFEAFKKRSPKYNPGMSDQAEMDNESEDI
                     QHHDIDNNKAIQNDIPDQKVDDKSDKNAVNKEEQHDNGTNNSEETKVK"
     gene            13120..13461
                     /locus_tag="OY092_001671"
     CDS             13120..13461
                     /locus_tag="OY092_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3969 family protein"
                     /protein_id="HCX1076613.1"
                     /translation="MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYM
                     MESLSSLGVKPDIIDLIHKGTELEDFAAFNLSIDDTVTVCLQRTEELLKQYKNVEFND
                     KILINWRVIQK"
     gene            13562..14134
                     /locus_tag="OY092_001672"
     CDS             13562..14134
                     /locus_tag="OY092_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076614.1"
                     /translation="MEKNEYTAKYNEYNQLLDATYSQAVAYLLNKYGAVTDDYYKEKS
                     YTRFLNGEIKSITKGKYTRASEGLYCHHISEDKFQNLSDLRFISEFKYSYNYQKKENL
                     VYCDLIEHLILHAIITKESDGQFGAAGLCQMIKPTVIDWYISEYNPKPAWMQATKARA
                     YLPRILVEKLLIKIDDMLEGIEIYDFLESR"
     gene            complement(14331..14900)
                     /locus_tag="OY092_001673"
     CDS             complement(14331..14900)
                     /locus_tag="OY092_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HCX1076615.1"
                     /translation="MKVIEKVHYEDILESKIVRLFQAFIKDKMDQLFITSEHFAIDID
                     KLLFQLNLNVKYIKMEGNTSGYLSGRTIYINNNHSINNTRFAIARELGRYLFKNSDLM
                     RDNNDNSLKNLHEMIYESDVNQFSVDLLMPKKQIEALVYNFYEVNNINLSSGLSEKER
                     NKLLNLISTKLEVSKVAAGLRLYNLGIHI"
BASE COUNT         5120 a         2789 c         2305 g         4988 t
ORIGIN      
        1 tagaaatcag cttttttaca ttgcctaaga actttatgtc ccagcctgtg acaattcatc
       61 taaccttttc atcagttgag cgattttaac ctagccttca aaagtttttg gatcaggtcc
      121 aattctctta tcttgattta aaccatcaat tcgtgtcatt tgttcatctg ataattcgaa
      181 atcaaatatt tggaagtttt cagagattct gtttggtgtt accgatttag ggattgtaac
      241 cacaccatgc tgcacattcc atcttaaaac aacttgggca ggtgactttc ctaattcttg
      301 agcaatgtct ttaattgcct catcatttaa aatttgtgca ttcatcaatg gtgaccaaga
      361 ttccatcacg atatgttgtg ctgccaaata taatttcaat ttatgttgcg ttaaatatgg
      421 atgatattca acctgattaa ttacaggttt aattgacact tgtgccaaca aagcttccaa
      481 atgttcaggt tcaaaattgc tgacacctat atttttaact ttattatttt tatataaatc
      541 ttccatacct ttccatgtat caaccattac ggcttcgttc gtacctggcc aatgtactag
      601 atacaaatct aagtatttta aacctaatct agataaacta gcttcgtaag cagctgctac
      661 attttcacga ccaaaatcct caaaatataa ttttgaagta ataaataagt cttctctagc
      721 aattccagtt gattctaatc cggcacgaat gccagcacct acttgttctt cattcccata
      781 aacttttgcg gtatcaatac tacgatatcc ttgttcaatg gcatacttaa cactttccat
      841 gcaattttca tcattttcca cacgaaatgt ccctaaacca atttttggca tcgtgtttcc
      901 attataaaat gttttaacct ccataaatat cgcctcacct ttttgatgta ttataccctg
      961 ttatcataac aaatctgagt tgaatacatg agaaaaaaca cttaacttat agcaatcaat
     1021 cactaaaatg ctagtaatat ctttcaaata ttaatcaaaa tgtaaaagca attctgttta
     1081 atttatgaca aactaaaaaa gccgaagtaa caacatatag tcatcacttc agcctaacat
     1141 ttaattgaat gattcaattt tatccatcat ttgttgtaag tcttccacgt tgtattgaat
     1201 acgaccatgg aatacaaatt tgttaaagaa ctcgtctaat tgttcagcac cgacaagcac
     1261 tttgacagca ctattttgat tataatttga aatcgttaca tcgccttcat ttttaggatt
     1321 aaagtataaa attgaagttg gcgtatattt ggcacctaat tctttttgta aatcttcagc
     1381 caattgttta atcgcctcaa tttgatctga ataatttaca aatgataatg aacgtttgtc
     1441 atcattttga tccatcacaa tagtttgcgg tctagattta tctaaatcta atgtatcaaa
     1501 tacttgttcc attggtggta aatctttaaa ttgaccgcca cttataccat tataaacatg
     1561 accttttaac aattgagaat caatgatata aagtccagtt cttgttaaga ctatatgact
     1621 aatacgttca atattattaa agccatcctt cggtaaaaag atatttgcca taatgtgcat
     1681 atcttctggt cgaattcgtt tttctttaac taatctttca cgaataccaa ttaatctcat
     1741 gtccgttaca tattcactat gatttttcga gaacaatttt aatgcgtcaa tctcacgatc
     1801 ttttgtacta accatgtgat tataatcttc ttgttgtttt gtaattgtct ttttattttg
     1861 aatacgctct ttctctaaag cttcttcatg agacttttta atgttttgtt cttgttgttc
     1921 atacttttct tctgtttgtc gcttaacttt tttcttacta cctaaggcaa ctaagaaaag
     1981 gacaaaaaag attaatgcaa tgactactgc aataatgagt ccaatgacta tcggtgaaga
     2041 taaatccatc acaacaacgc tcctttttaa tatatgaata actttaatta taatagaaaa
     2101 gctaaagatt ttcgatacat attatcattt atataccgaa aatcttttat ttagctatat
     2161 tcaattcatc ttattatttt actgcgtctt ttaattcttc cactttgtct aatttttccc
     2221 atgggaataa tacatctgta cgtccaaaat gaccataagc agcagtttgt ttgtaaattg
     2281 gttgtttcaa atcaagcatt ttaataatac cagcaggtct taggtcaaag tgttttctaa
     2341 ctgcttcaac aagttgccct tcagaaactt tacctgttcc aaatgtatca attgcaattg
     2401 acactggttc tgcaacacca atcgcatatg ccaattgtac ttcacattga tctgctaaac
     2461 ctgctgcaac aatattttta gccacataac gtgcagcgta tgcagctgaa cggtctactt
     2521 ttgtaggatc cttaccactg aagcatccgc caccatgacg tgcatagcca ccgtacgtat
     2581 caacaatgat tttacgtcct gttaatcctg catcaccttg aggtccaccg attacaaagc
     2641 gtcctgtagg attgatgtag aatttagttt gttcattaat caagttttct ggaacagttt
     2701 gataaatgac atgagcttta atgtcttctt gaatttgttc aagtgtcaca tcctcagcat
     2761 gttgtgttga tacgacaatc gtatcaatac gtactgggtt atcattttca tcatattcaa
     2821 cagtgacctg aactttaccg tctggtcgta aataatttaa tgtaccatct ttacgcacat
     2881 ctgataaacg ttttgccaat tgatgtgata aataaattgc tagaggcata tacgtttctg
     2941 tttcattcgt tgcgtaacca aacattaaac cttggtctcc tgcacctgtt gcttcaattt
     3001 cttcttcgct atctttatca cgatactcta atgctttgtc cacgccttgt gcaatgtcag
     3061 gtgattgttc atcaatcgca gttaaaattg ccattgtttc ataatcatag ccatattttg
     3121 ctcttgtgta tccaatttct ttgattgttt ctctaacaac tttcggaata tcaacatatg
     3181 ttgttgtaga aatttcgccg gcgatcaatg ccatacctgt tgtaacagtt gtttcacagg
     3241 ctacacgtgc atttgggtcg tcttttaaaa tagcatctaa tattgcatct gacacttggt
     3301 cagcgatttt atctgggtgt ccttctgtaa cagactctga agtaaataat cgtttgttat
     3361 ttaacatagt ttgctccttt aaatttatat tacgaaaatt ctctctctgt gagctaaata
     3421 aaaaagacct tctaactatt aatatagaga gaaggcctaa tacgtccatt cgctcttatc
     3481 gttcagacct atttgtctgc aaacggtttg gcacctttct tttataaaaa agaggttgct
     3541 gggtttcatt gggtccatgt ccctccacca ctcaggataa gagaatccgt taaaaataat
     3601 agtacctaat taatgaatta atgtcaattt ttcataaata aatttccagt aaaatattgt
     3661 agattaatta tgttaatgtg ttatactaat taaatgtaaa ggcttacatt taaattatcg
     3721 ctttggaggg atttaggatg tcagtagaca catacactga aacaactaaa attgacaaat
     3781 tactgaaaaa accaacgtca cattttcaac tttcgacgac acaactttat aataaaattt
     3841 tagacaacaa tgaaggtgta ttaacagaac ttggtgctgt taatgctagc actggtaaat
     3901 atactggtcg ttcacctaaa gacaaatttt ttgtctcaga accttcatat cgagataaca
     3961 tcgattgggg agatattaat caaccgattg atgaagaaac tttcttgaag ttataccaca
     4021 aagtattaga ctatttagat aaaaaagatg aattatacgt atttaaaggc tacgctggta
     4081 gcgataaaga tacaatgtta aaacttacag tcatcaatga attagcatgg cataatttat
     4141 ttgctaaaaa tatgtttatt agacctgaat caaaagaaga agctacaaag attaaaccta
     4201 acttcactat cgtttctgcc ccacatttta aagcagatcc agaagttgat ggtactaaat
     4261 ctgaaacctt tgtcattatt tcatttaaac acaaagtcat tttaatcggc ggtactgaat
     4321 acgctggtga aatgaaaaaa ggtatcttct ctgtaatgaa ttatctctta ccgatgcaag
     4381 atattatgag catgcattgc tcagcaaacg ttggtgaaaa aggcgatgtt gcattattct
     4441 ttggtctatc tggcactggt aaaacaaccc tatcagcaga tccacaccgt aaactaatcg
     4501 gtgatgatga acacggctgg aataaaaacg gggtctttaa tatcgaaggt ggctgctatg
     4561 caaaagcaat taatctttcc aaagaaaaag aaccacagat ttttgacgca atcaaatatg
     4621 gtgcaatttt agagaacact gtagttgcag aagatggttc agtggacttt gaagacaatc
     4681 gttatacaga aaacacgcgt gccgcttatc caattaatca cattgacaat attgtagtac
     4741 catcaaaagc agcacatcca aatacaatta ttttcttaac tgcggatgca tttggtgtta
     4801 ttccaccgat ttcaaagtta aataaagacc aagcaatgta tcatttcttg agtggtttca
     4861 cttctaaatt agctggtaca gagcgtggtg tgacagaacc tgaaccatca ttctcaacat
     4921 gtttcggcgc accgttcttc ccgttacacc ctactgttta cgctgatcta ttaggtgaac
     4981 ttatcgattt acatgatgtt gatgtttatc ttgttaatac tggatggact ggcggaaaat
     5041 atggtgtagg acgtagaatc agcttacatt acacacgtca aatggtaaac caagcgattt
     5101 ctggcaaatt gaaaaatgca gaatatacaa aagatagtac gtttggttta agcattcctg
     5161 tagaaattga agatgtaccg aaaactattt taaatccaat taatgcatgg agcgacaaag
     5221 agaaatataa agcacaagca gaagatttaa ttcaacgttt tgaaaagaac ttcgaaaaat
     5281 ttggtgaaaa agttgaacat attgctgaaa aaggtagctt caacaaataa atttgaatac
     5341 taattaaaga gccaaccgtt gttatagtct aacaatggtt ggctcctctt attttatatg
     5401 gtaaaaattt ataggcaatt ttattacaac aatgcacatt taaggtgacc ttcatgccaa
     5461 actcgcatca cttattcaat ggaagcagca cgtcttcaca taaagtacca atcccttacg
     5521 ctatgcatgt tgccccgctt tgcataaagt acttatcgtt aactcaacgc aagttgttcc
     5581 tattcacaaa aagcacatac agttatctgc atggagcaca ttttcattga aagcgcatac
     5641 cgctcattca acgtatatca cacatcttca aagattgaaa gttcccatgc gcacaccacg
     5701 tttcatacta gctatgcaac tcaacttggt tcataaactc tttaatataa gtcaaagttt
     5761 caaccatcgc tggtggtctt ggcacatgtc cttctgccat ttgataaaat gtttcatgcg
     5821 tagcaccttt taattctagt tggtccgcta aataatacgc atgatgaata ccaacttgct
     5881 ggtctttccc tccatgtaca attaatatcg gcggactgtt ttcattaatg tttggaatcg
     5941 cttggcgtgc ctcatatgcc gctcgatctt ttttcggatg accaatcatt ctacgtaaca
     6001 tccctcttaa atcaacgcgc tcttcataca tcaaatcaat atctgagact ccaccccaga
     6061 tgatataact atttacaggt aagtcttgaa acgtcaacaa cccttgtagt ccacctcttg
     6121 aaaaaccaac catatgaata aaagcttgcg gatatttatc atgtagcaat cttaataatt
     6181 cagtcacatc atttaaatcg ccacgataaa attcgtcttt accttcactg ccattgttac
     6241 ctcggtagta tggcccaatc actaaagttt gactatctga aaattgcatt aatctacctg
     6301 cgcgcacacg tcctacttgg cctttgccac ctcgcaaata tactacaatg cgttttactt
     6361 catgatgtgg tgtcatcatt aaagctttta cttgtaaatc atctgacaaa tatgtaattt
     6421 cttctaattg atgcgtaaaa gattcaattg gcattcgttt acgtttgata aaatccaagt
     6481 gattgcaccc tctctacgca ttttaaaatg gtactatctt gcagtaagaa actccgttgt
     6541 gtgagttcaa tatcattgat acagttaaac aacactggcc ctgctgtttc taaataatcg
     6601 ttcttgctta ccaatgattc aacttcgata aaatatacat cttttacaaa atcagtttga
     6661 tcatgtgttt caatggtata ttgtgctatg taatgaatat ttttaacttt ggcgcctgtt
     6721 tcttcatata attcacgtgt aactgcttca gcactgcttt ccccgcgttc ccttttacca
     6781 ccaggaaatt caataccccg taaattatgt ttggtaaaaa gcaattgatt tttaaacgtt
     6841 ggaatagcta gcacatgatt accatctgct acctcattat cctttttaaa tgtcaaatta
     6901 acttgacgat tatctttatc cctaaacttc acgcgcatca catccctaca ttgtatgtta
     6961 atataatagt taattactat cgttggaggc attaattatg aaaaagatat tcttggcgat
     7021 gattcatttt tatcaacgtt tcatttcgcc actcactcca ccaacttgtc gtttttatcc
     7081 aacatgttca gagtacacta gagaagcgat tcaataccac ggtgctttca aaggccttta
     7141 tttaggtatc cgtcgtattt taaaatgtca tccgcttcat aaaggtggct ttgaccctgt
     7201 tccgttaaaa aaagacaagt cagaaagcaa gcattcacat aaacataacc attaatatgg
     7261 ttgtaattga gttatatcca ctaaaggggg gcgaaattcg agtcgcccct cttttaatat
     7321 gcctgaatgc gccaccacat cttgttcaaa ataataacct gctggtgtca catctcctgg
     7381 ataatcacct ttacgagcaa gcatcgctgt aaaataacgg cttaaaccat attcgtacat
     7441 gccgccaata accactttta caccatgact tttcaaagta tcaattgccg tttgcacttt
     7501 atcaatgcca cctagacgaa atggttttaa tacaacaact ttcacattgt ataattctat
     7561 caaattaatt atgtccaaca acgatgttgc cttttcatca agggctattg gaggtattgt
     7621 tccatccact acgtcatcaa gcatggagat atctttaaat ggctcttcga tataaagaac
     7681 ctgttcacgc gctaataact gtaactgtgt gaaatcttga cgatccaagg actcatttgc
     7741 atctataacc aattgaaagt gaaactctaa ttcccgtaac actctaattt gatgcatgat
     7801 ttgaggtgtc cattttaatt taattctggc cggcttagtt gcttttaatg actctagttg
     7861 tttatttgat aagccgctca ctgtcgctcc atatgctact gaaaatgaag gcagtacatg
     7921 aaatatttga tacaatgcca tgacaatagt tgcccttgca gcaggcgtat tttccaatga
     7981 atctactaat tttagtgctg cttcatacgt ttcaaatgat ttatttctat tatcttcgaa
     8041 ccattgctca attacatgtt tcactgaagc aattgtttca tgatcatacc aatctgtttg
     8101 aaaagcgtta cattccccga aatatgcatt tcctttgtca tcaatcaatt cgataaacaa
     8161 acaatcacga tgcgttaaag tgactttcgg tgttacaatt tgtgacttaa atggctcact
     8221 atatttataa aaatgcaaag ctgtcaactt catcaaatca tcctctatac aacttatttc
     8281 tttgtaattt acctgttgat gtataaggta aagtatcaac cttttcaaag tgtttcggta
     8341 ctttatattt cgctaaatgt tgtgataaat atgcaatcaa ttgtgccttt gaaatgtcac
     8401 tttcactgac aaaatataat ttaggcactt ggccccaagt atcatcagga tgccctacac
     8461 atactgcgtc actgatacct ggaaattgct tcgctaccgt ttcaatttga tatggataaa
     8521 tattttcacc gccactaata attaaatctt tacgtcggtc ataaatcatg acataacctt
     8581 catgatctat ttcagcaatg tcacctgtat taaaataacc attttcaaac gtacccgtta
     8641 aatctgttgg atacaaatat ccattcatca cattggcgcc tttaatcatt aattctccat
     8701 gaccttcttt attaggattt ttaattttta cgtctacatt ggcacttggc atccctacag
     8761 tgtcaggacg tgcatgcaac atttccggtg ttgctgttaa aaattgcgaa catgtctcag
     8821 tcataccaaa tgaattataa attggcaggt tatattgtaa tgccgtctct atcatagtgg
     8881 cagataattt agcaccgccg agtaatattt tttgtaaatt ataaggttca tgtaaacctt
     8941 gttgcataag ccaatttaaa gtttgtggca caagcgaaat gtgcgtgatt cgttcatttt
     9001 taatcatcgt taaaatttgt tcggcattga atttatcaac aatgcgcaca gtaaaacctt
     9061 caataacagc tcttaaaagt acactgagac ccgaaatatg ataaatcggc aagacagata
     9121 gccaattagt gtcacgatca aatcccaagc tctctttaca tccgattgca ctggcataat
     9181 gattacgaaa cgtttgtggc accgcttttt gagggcccgt tgtccctgat gtaaacataa
     9241 tcgatgcaat gtcatctaaa ttaaatgatg tatttaatat gttggacggc gactctttcg
     9301 gcaccacagt ttcattcgat gtatcatatt ggatacccat tgtgttgtcc aacaaaccgt
     9361 tcgttgtaat atcccttcca gcgaattcaa tatcatccag cgatacaatt tgaaaccctc
     9421 gtaattccag tggcaaggta caaaaaatca attgtacatc gattgacttc atctgattcg
     9481 tcatctcatt aggtgtcaac cttgtattaa tcatcgcaat ttcaatattt gtcaaccaac
     9541 atgcatgtat taaaatgatc gattgaatcg aattatctat gtatagccca acacgagatt
     9601 gttgataagc cttgagtctt ttagccaata gactcgcttc acagtataaa ttttgataag
     9661 tataagattc ttgaccgtct gttatcgcaa tatgatgtcc attttgttgt gcttgtttat
     9721 ataaccaaaa gtccatgcgt tattcctcca aaatcattta cattataatt ataacgattt
     9781 tatgacattc tagcagtggt tatgtttaaa aatataaaaa agtagacgaa ttgatgcatt
     9841 gatatgattg ttataatgct caatacatat cgttatatca ttcgtctact attatcagtt
     9901 atttttattt aattttagtg tcattctgtc attttgatgt ggtgatttac ccattgttgc
     9961 cacatcatct gcaatgtcaa ttggtatacg gttcatgtct tgtaatgcac ttaaatggaa
    10021 tacttcatca tctaaatttt caatgagata tacataatat gttaccttgt cctttttata
    10081 ttttaacgtt ttccaaaagt ccggcttgca attcaataca ttatccggaa tatattcaat
    10141 aaataagtaa cgtttgctgc ctactttgtc tatgaaatat tttgcagtgc ctttttctat
    10201 acctcttata tgtgcatagt ctgctgaaaa gtaaatacta cctattgttt cattatgttg
    10261 ttgtatttca aatcgttggc ctactatttt attatttgtg ccacaactac ttaaaaaaat
    10321 cagtagatat agcattaaac atattttcat ccccttgaat tttaaaaact ttttcaaaag
    10381 caacacctct aaaaataaat acaatatatt atagcaaata gaaattatta ttttgttaaa
    10441 ttaagttgtc atgttcgtgt cattttgagt cgtaatacaa ctttacaatt attaaattaa
    10501 cacttctaca atccaaaaat atttttaaag ttttgaaaaa attaaagtat ttccactact
    10561 aatttggtaa aatatgatta tgtgatatag tgaaagcgtt ttacacttaa taactccctc
    10621 ttaaatgcat ccaggtttta tgtagtaaat catgaaaata acatataaat atagaggaga
    10681 tttacctttg aatacagaga acaacaagaa tcaaaaccaa tctgttaaaa attctgaaag
    10741 acgcggcatg ttaaaaggat gcggcggttg ccttatttct tttattttat taataatctt
    10801 attatcagcc tgttcaatga tgtttagtaa taatgacaat cccactagta atcaatcatc
    10861 aaaaacgcaa ttaactcaaa agatgaaaat aaaaatgaag ataagcctga ggaaaaatca
    10921 gaatcagaaa cagataagga tttacaatca accgaagaag tacccgcaaa tgaaaatact
    10981 gaaaataatc aacatgaaat tgatgaaata acaacaaaag atcaatcaga cgatgatatt
    11041 aacacaccaa acgttgcaga agataaatca caagacgact tgaaagatga tttaaaagaa
    11101 aagcaacaat caagtaacca tcatcaatct acgcaaccta agacctcacc atcaactgaa
    11161 acaaacacgc aacaatcatt tgctaattgt aagcaactta gacaagtata tccgaatggt
    11221 gtcactgccg atcatccagc atatcgacca catttagata gagataaaga taaacgtgca
    11281 tgtgaacctg ataaatatta aacaacaagc gaattgaatt caaattgtat ttagctttat
    11341 gcactaatca catagtaaat aatgagggag attttttagg catgagcaat caattcaaaa
    11401 gcgaagaaga gcgaagacaa tgggaacaat tccaagcttt ccaaaatcaa caaaaccaac
    11461 agaaccagca atacggacaa aagaaatcta aaaaaggatg gttctggggc tgtggtggtt
    11521 gtctagtatt atttatttta attatcatcg gtatttcagc ttgtacagct ggtattacag
    11581 gtaaccttgg cggaaatagt tctaaagaaa cgaacaaaac ccataaaatc ggtgaaactg
    11641 ttaaaaatgg cgaccttgaa gtcactgtaa attcagtgga aactatgaaa tctgtaggac
    11701 cgtctcttgc accaacaaac gctaaaggta catttgtcgt tgctgatgtg acaattaaaa
    11761 acaaaggtaa agaagcgtta acaattgata gttcaatgtt taagttaaaa tccggtgata
    11821 aaacatttga agcagataat acaggttcaa tgtctgctaa tcaaagtgac aatggtagta
    11881 tagaaaattc atttttctta cagcgtataa atcctgatag cactgcacaa ggtaaaattg
    11941 ttttcgatgt gtcagaaaac atagccaacg caaaagataa aaaattagaa gttatttcta
    12001 gtttatttag cgtcaagaag attacatttg atttatccga agctaaaaaa acatcaaaag
    12061 ctaaaaaaga caagcaagat acagaagtag ctgttgcgag ttcaaatagc gataatataa
    12121 gttatgaagc ttcggctact acacctgcta caacttctag tgcggatact gattctgaag
    12181 atagcgaaaa gtctagtaaa gatgaggata agcagaatgc gtctaaaagt gataaatcta
    12241 gtgtagaaaa aagtgaatct aatgaggaaa ctgctcctgt agagcctatg cgccagagca
    12301 aacctaccac tagtgaagca ccacctagtc aaaatattca caatgaagat agcatgtacg
    12361 acgcttcaac agaataaaat ttcagggtag ctcggctacc cttcttttac ggaaaaatta
    12421 attatacata atcaaatcaa ggagataaaa aaatgaaatt caaagctatc gttgcaatca
    12481 cattatcatt gtcactatta actgcttgcg gtgctaatca acataaagaa aataatagta
    12541 aatcaaataa cactaataaa aagacgcaac aaactgacaa cactacaaag tcaaatacag
    12601 acaagcaaat gacaccacaa gaagccgaag atatcgttcg aaacgattac aaagcaagag
    12661 gtgctaacga aaatcaaaca ttaaattata aaacaaatct tgaacgaagc aatgaacatg
    12721 aatattatgt tgaacatcta gtccgcgatg cagttggcac accattaaaa cgttgtgcta
    12781 ttgttaatcg acacaatggt acgattatta atatttttga tgatatgtca gaaaaagata
    12841 aagaagaatt tgaagcattt aaaaagagaa gccctaaata caacccaggt atgagtgatc
    12901 aagctgaaat ggataatgag tcggaagaca ttcaacatca tgatattgac aataacaaag
    12961 ccattcaaaa tgacatacca gatcaaaaag tcgatgataa aagtgataaa aatgctgtta
    13021 ataaagaaga acaacacgat aacggtacaa ataattctga agaaactaaa gttaaataag
    13081 gatatacttt gattaatcgt aatttttagg agaaccacta tgataacatt tgaaaatata
    13141 caacaacttg aaaaatatac cttaatgact atgcatggtc tttttaatca acttaaactc
    13201 ggtattattt caatcgacaa tgcagagcat accctcttta caccttatat gatggaatca
    13261 ctctcttccc taggtgtgaa accagacatt atcgatttaa ttcacaaagg gacagagtta
    13321 gaagactttg cagcatttaa tttatcaatt gatgatacag ttacagtctg tttacaaaga
    13381 actgaagaac tattaaaaca atacaaaaat gtagaattca atgacaaaat attaatcaat
    13441 tggcgcgtta tacaaaagta atagacatat aaaagtcgaa cgtaactaag tgggtattga
    13501 ttttattctt tctaagttac aagtatttca ttttataaag tttgaaaaga ggtttattga
    13561 aatggagaaa aacgaatata cagctaaata taatgaatat aatcaattat tagacgctac
    13621 ttactcgcaa gctgtagcat accttttaaa taaatatggc gctgtaaccg atgactatta
    13681 taaggaaaaa tcatacacac gatttttaaa tggagaaatc aaaagtatta caaaaggaaa
    13741 atacactaga gctagcgaag gattatattg tcatcacata agcgaagaca aattccaaaa
    13801 cttatctgac ctaagattca tttccgaatt taagtactca tacaactatc aaaagaaaga
    13861 aaacttagtt tactgcgatt taatcgagca tttaatttta catgcaatta ttacaaaaga
    13921 atctgatggt caatttggcg cggctggatt atgtcaaatg atcaaaccaa cagtcattga
    13981 ttggtacatt agcgaatata atccaaaacc agcatggatg caagccacca aagcacgtgc
    14041 ctatttgcct agaatattag tagagaaact actcattaaa attgacgata tgttagaagg
    14101 aatagaaata tatgatttcc ttgagtctag ataaatgatt aatggagatt tattttttgc
    14161 tgttgagatt ttgttataga tgtttaaacc tgtaattaaa tatattttat aaaatagacc
    14221 acgcatacct atctataaac ggacaatgtt tataaatgag tttgcctggt cttgaattgt
    14281 attagttttc ttttggtttt aataaatcga ctagattttc acaatattta tcaaatatgt
    14341 attcctaaat tatacagcct taatccagca gctactttcg aaacttccaa cttagttgat
    14401 ataaggttca atagtttgtt tcgttctttt tcagataaac cagaacttaa attgatatta
    14461 ttgacttcat aaaaattata gactaatgcc tctatttgct ttttaggcat aagtaagtcg
    14521 actgaaaact gatttacgtc gctttcataa atcatttcat gtaaattctt tagactatta
    14581 tcgttgttat ctctcattaa gtctgaattt ttaaataaat aacggcccaa ttcacgagct
    14641 attgcaaatc ttgtattatt aatcgagtga ttattattaa tatagattgt tcttccactt
    14701 aaataacccg aagtattacc ctccatttta atatatttaa catttaaatt aagttgaaat
    14761 aatagcttgt ctatgtcaat agcaaagtgt tcagaagtaa taaaaagttg atccattttg
    14821 tcctttataa atgcctgaaa taatcgaact atttttgatt ctaaaatatc ttcataatga
    14881 actttctcaa taactttcaa ttgattcccc accctaacta aaaaattgaa cctacatcat
    14941 ttaataaatt taaaactata ggtgtaaaca ttattaaaat aaaactcctc cactactaaa
    15001 tgaaacggag ggacatgatt tcaaaataaa ataccttttt ttataaattt attataatat
    15061 tttccattat actgtacaac cgaatctaat ccaacgatcc cgaaaagaag aacaaaggtg
    15121 gttctgcttc ataatcactt ttaactaagt gttcattttt aattatttga tcgacggttt
    15181 tccaattttt tacttcttgc tc
//
LOCUS       DAKPJH010000063        14714 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.063, whole genome shotgun sequence.
ACCESSION   DAKPJH010000063 DAKPJH010000000
VERSION     DAKPJH010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14714
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.063"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(142..1140)
                     /gene="sirC"
                     /locus_tag="OY092_001674"
     CDS             complement(142..1140)
                     /gene="sirC"
                     /locus_tag="OY092_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirC"
                     /protein_id="HCX1076616.1"
                     /translation="MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYF
                     INPNDSMDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGAS
                     LSAVVFIAFFSHLTIHLLPLFAVLGGTIAMMILLVFQTKGQIRPTTLIIIGISMQTLF
                     IALVQGLLITTKQLSAAKAYTWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKI
                     SILDDPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGS
                     YAKKLLMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL"
     gene            complement(1137..2132)
                     /gene="sirB"
                     /locus_tag="OY092_001675"
     CDS             complement(1137..2132)
                     /gene="sirB"
                     /locus_tag="OY092_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirB"
                     /protein_id="HCX1076617.1"
                     /translation="MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFD
                     SENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFV
                     IFSITFIQIQSFKMIVVIAFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFT
                     AFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILM
                     TSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYK
                     YLIPFTALAGAILMIISDIVARIIIKPLESPIGVVTAVIGAIVLIYIMKKGRQRL"
     gene            complement(2148..3140)
                     /gene="sirA"
                     /locus_tag="OY092_001676"
     CDS             complement(2148..3140)
                     /gene="sirA"
                     /locus_tag="OY092_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter
                     substrate-binding protein SirA"
                     /protein_id="HCX1076618.1"
                     /translation="MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAM
                     GTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQ
                     EPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALG
                     KEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILN
                     DLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESE
                     WTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK"
     gene            3371..4351
                     /gene="sbnA"
                     /locus_tag="OY092_001677"
     CDS             3371..4351
                     /gene="sbnA"
                     /locus_tag="OY092_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diaminopropionate biosynthesis protein SbnA"
                     /protein_id="HCX1076619.1"
                     /translation="MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGG
                     SMKDRPAKYIIEHGIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKIS
                     PTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQS
                     HYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEVHPNAQIVAVDAKGSVIFG
                     DKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSI
                     IAAIEQLITSIEEGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE"
     gene            4348..5358
                     /gene="sbnB"
                     /locus_tag="OY092_001678"
     CDS             4348..5358
                     /gene="sbnB"
                     /locus_tag="OY092_001678"
                     /EC_number="1.5.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate
                     dehydrogenase SbnB"
                     /protein_id="HCX1076620.1"
                     /translation="MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPL
                     KPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILN
                     DPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLE
                     QFDHIERVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQ
                     PYIEYDWLQKGAFISNISIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFS
                     KEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLN
                     LY"
     gene            5379..7133
                     /gene="sbnC"
                     /locus_tag="OY092_001679"
     CDS             5379..7133
                     /gene="sbnC"
                     /locus_tag="OY092_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis protein SbnC"
                     /protein_id="HCX1076621.1"
                     /translation="MQNHTAVNTAQTIILRDLVDALLFEDIAGIVSNSDITKENGQTL
                     LIYERETQQIKIPVYFSALNMFRYESSQPITIEGRASKQPLTADEFWQTIANMNCDLS
                     HEWEVARVEEGLTTAATQLAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLR
                     EADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANIDELENLTAPIKEQATDMLHDQGL
                     SIDDYVLFPVHPWQYQHILPNVFAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPY
                     NHVKVPFAMQSLGALRLTPTRYMKNGEQAEQLLRQLIEKDEALAKYVTVCDETAWWSY
                     MGQDNDIFKDQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANNRTLYQMICGKDNIS
                     KNDVMTLFEDIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRI
                     YKPWLTAHQLSLPKYVVREDTPNTLINEDLETFFAYFQTLAVSVNLYAIIDAIQDLFG
                     VSEHELMSLLKQILKNEVATISWVTTDQLAVRHILFDKQTWPFKQILLPLLYQRDSGG
                     GSMPSGLTTVPNPMVTYD"
     gene            7126..8382
                     /gene="sbnD"
                     /locus_tag="OY092_001680"
     CDS             7126..8382
                     /gene="sbnD"
                     /locus_tag="OY092_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B export MFS transporter"
                     /protein_id="HCX1076622.1"
                     /translation="MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSV
                     VEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTP
                     LQFVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVT
                     ASILGFSALLMSIAVITFIVCIFGALKLIETTHMSKSQTPNINKGIRRSFQCLLCTQQ
                     TCRFIIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLW
                     GRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVV
                     VNACHQQLKGTFVGTTNSMLVIGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFL
                     ICSTITNQINEHTLMKLWELKQKSAK"
     gene            8372..10108
                     /gene="sbnE"
                     /locus_tag="OY092_001681"
     CDS             8372..10108
                     /gene="sbnE"
                     /locus_tag="OY092_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,3-diaminopropanoate--citrate ligase SbnE"
                     /protein_id="HCX1076623.1"
                     /translation="MQNKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSD
                     LETLTGEFRYWSAMGHHMYHPEVWLIDGKSKKITTYKEAIARILQYMAQSADNQTAVQ
                     QHMAQIMSDIDNSIHRTARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSE
                     ADLEKYAPECHTSFQLHYLAVHKNVLLTRYVEGKEDQVEKVLYQLADINISEIPKDFI
                     LLPIHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDLVYPTSSVRTVFSKALNIYLKLP
                     IHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQT
                     VEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSSMSKLSQVIEQSGLAPE
                     PWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTI
                     ATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLV
                     AHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICH
                     NKEVSYCESNNS"
     gene            10017..11867
                     /gene="sbnF"
                     /locus_tag="OY092_001682"
     CDS             10017..11867
                     /gene="sbnF"
                     /locus_tag="OY092_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-(L-alanin-3-ylcarbamoyl)-2-[(2-
                     aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase
                     SbnF"
                     /protein_id="HCX1076624.1"
                     /translation="MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSS
                     LIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADT
                     TTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYE
                     FYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNIKLQWLAIDKDKVETTVSRNVVVK
                     EMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLW
                     LGESDELYHPQQSIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLK
                     QIQQQDTYLKDELKTAFLGEVLGQSYLNTQLSPYKQTQVYGALGVIWRENIYHMLIDE
                     EDAIPFNALYASDKDGVPFIEKWIKQYGSEAWTKQFLAVAIRPMIHMLYYHGIAFESH
                     AQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIE
                     TDDERLVRDFLHDAFFFINIAEIILFIEKQYGIDEQRQWKWVKDIIEAYQEAFPELNN
                     YQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGINDATTISET"
     gene            11842..12618
                     /gene="sbnG"
                     /locus_tag="OY092_001683"
     CDS             11842..12618
                     /gene="sbnG"
                     /locus_tag="OY092_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis citrate synthase
                     SbnG"
                     /protein_id="HCX1076625.1"
                     /translation="MQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDT
                     EHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETV
                     EHIVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDD
                     IAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEIVNAHGKHFCALPREDE
                     DIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDEG"
     gene            12618..13820
                     /gene="sbnH"
                     /locus_tag="OY092_001684"
     CDS             12618..13820
                     /gene="sbnH"
                     /locus_tag="OY092_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis decarboxylase
                     SbnH"
                     /protein_id="HCX1076626.1"
                     /translation="MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQ
                     MYYAMKANSERTILDTISQYVEGFEVASQGEIAKGLAFKPANHIIFGGPGKTDEELRY
                     AVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFG
                     ISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKAWSEKHRF
                     PLKHINLGGGIGVNYADLTSQFEWDNFVERFKTLIVEQEMEDVTLNFECGRFIVAHIG
                     YYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISR
                     QDTTLVGQLCTPKDVFAREVKIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIY
                     LTQTKEDE"
     gene            13824..14588
                     /gene="sbnI"
                     /locus_tag="OY092_001685"
     CDS             13824..14588
                     /gene="sbnI"
                     /locus_tag="OY092_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional
                     regulator/O-phospho-L-serine synthase SbnI"
                     /protein_id="HCX1076627.1"
                     /translation="MNHIHEHLKLVPVDKVDLHETFEPLRLEKTKSSIEADDFIRHPI
                     LVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETL
                     QQEHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVER
                     IAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLAL
                     LKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ"
BASE COUNT         4880 a         2407 c         2949 g         4478 t
ORIGIN      
        1 taaagtatta atatgtaatt aagaaagtcg acgcttgtta acattaacaa caactatatg
       61 tataaaaaaa cctcgcaact gttagttaac tgaatcattt agctaacttc gttgtgaggt
      121 cattttgttt tgataatatc tttataactt tttcacggtt aataataagt atatgaagaa
      181 tggggcacca aaagcagcaa taaatacacc tgctggcact tctttaggca agaataaggt
      241 acgcccaatt aagtctgcaa taacaattga tatggcacca atcattgctg acattagtaa
      301 ctttttagca taacttccgc gaacgattgt tttcgcgata tgtggtgcga ttaaaccgac
      361 aaacccaatg ttacctacta aactgattgc catagatacg agtatagtag aagtgattaa
      421 ttggattagt ttcatacgtt gtacatgtaa gcctaagcca atcgctacag ggtcatcaag
      481 tatagatatt ttcatttttg gtataacaag aaataacaac ggcacaacag ctaaaataac
      541 catacccaaa atgattgtat ctttaaacgt agcaccgtaa agacttccga ctagccatgt
      601 ataagctttg gcagcagata attgcttcgt tgtaatgagt aatccttgga caagcgcaat
      661 aaacaacgtt tgcatcgaaa taccgatgat tatgagtgtt gtcgggcgta tttgtccttt
      721 cgtttgaaac actaatagta tcatcattgc aattgtgcca cctaatacag cgaatagtgg
      781 aagtaaatgt atcgttaaat ggctgaaaaa tgcaataaag acaacagcac ttaagctagc
      841 accacctgtg ataccgataa tatcaggtga ggcaattgga ttttttaata cattttgcaa
      901 cattaaacca ctcattccta gtgcggcacc tgctaaaatc gcaagtgtaa tgcgaggtaa
      961 gcgtaatact tctaaagtga attgatccat actgtcattt ggatttataa agtacatcag
     1021 tacgcgttgt aatggtataa agcttgaacc aatcatcata cttaccactg aaacgatggc
     1081 taaaaagatt aacgcgaaga tgagatggta attgtctttt ttattaatct tttcggtcat
     1141 aagcgttgac gtcctttctt cataatatag attaagacaa tagcgccaat gacagcggta
     1201 acgacaccga taggcgactc tagtggctta attattatac gagcaacaat gtctgaaatg
     1261 atcattagga ttgctccagc taatgcagta aaaggaatta aatacttata gtttggtggt
     1321 aataatcgtt tgctaatatt cggtacgata agacccacaa agacgattga tccagctacg
     1381 gctaccgaaa taccggctaa catactgatg agcataataa tcatccattt gattaatttt
     1441 atgttttgac cgaggccggt tgcaatgtcg tcacttgtca tcaagatgtt gatgtgtgca
     1501 gccatgctaa atgcaattaa aataagtatc aatacaagcg gaataatcca tgggatatcc
     1561 caaatgttac gtaatgaaac ggagccactc aaccaaaata ataggccttg taagtctgtt
     1621 tcgttcataa taagtatgcc ttgagtaaag gctgtaaata gcatcgcaat cgcagcacct
     1681 gccaaaatga cacggtgagg tgagaatagt gtttgtctaa acatacctag cgcaacgact
     1741 aagactgtaa caacaatagc ccccaaaaat gcgatgacaa caatcatttt aaaagattga
     1801 atttggataa atgtaatact aaagatgaca aaaaatactg cgcctgcatt gacaccgaaa
     1861 aggcctggtg atgctattgg gtttcgtgta agtgcttgca tcaacaaacc tgagacagca
     1921 agggcagcac cagtcaataa cgcaatgatt gttctcgacg cccgtgcacc agtgacaaca
     1981 tcatgtaaat cgttttcact atcaaagttg aataacgcct gtatcaccgt acctggtgac
     2041 acaagcgtat ttccaatcat taaacttaag atagctacta ttgcaagaca taaaccagca
     2101 ataacgattt ggtattttgg tttaagtagc atcgtaaaac tccttaatta ttttgattgt
     2161 ttttcaatat ttaacttttc atataaatcg tcaatcaatt ttaatgatga tttatatccg
     2221 ccagctaagt tccaagtgat ttcatctaaa tcatcagata cttggttgtt tttaactgcg
     2281 tctaaatttt tccactcttt acttgaagtc cattcgcttt cagtcttttt aactaatgca
     2341 gcatctttcg catttggatc tgattttact acaaaaatat gatcagcgtt cattaacgga
     2401 atgctttctt tagatgtaag ttggataata tctttaccat tatcaacttg tttttgtaag
     2461 tctttattac gtttgaatcc taaatcattt aagatttcac cagcatatcc accagcataa
     2521 attcttgtat gatcagcacg gaagttaaca actgaagctt tcaatggcca tgcatcttta
     2581 tactttgctt ttgcatcttt ttggaatgca gctactttat catcgtactt tttaagtaaa
     2641 tcttcagctt ctttttcttt ccctaaagct ttccccatta acttagttgt atctttgaat
     2701 ttgaaaactg tatcagtaga aactgttggt gcgattttag ataattgatc gtaaactttt
     2761 tcatttctaa cttttgacgc gacaattaag tccggtttta atttagagat ttcttctaag
     2821 ttaggtgcag gttcttgacc tacaatctta gtatctttta aatcattttt tatgtattcg
     2881 aatttcggtt tttgtgtcca tgattctaca gcacctacag gtttaacacc taaagataca
     2941 gcgacgtcag tggcaccttg atatagcgta acaacacgct ttggtttccc tttaatttca
     3001 gttgtaccca ttgcatgttt aattgaagtt gtttccttat ctttgttatc agatgattgc
     3061 ttatttgaat tcccactaca tcctgctaaa acaagtagga aagcaagcgt aacaacaagc
     3121 attttaatta ctttattcat tgactaatta gcctccttcg tgatgtatga caatgagaat
     3181 cattatcacg atttagtatg aattaaaatt tttcctaagt caataaaata tttatgattt
     3241 acatgcaact tataattatt tgacatataa atgcataaaa aatataatcc taattacttg
     3301 atagtgagaa taattatcaa ttaggtaaca cacaatatta tagaatttta aatttgagga
     3361 ggaagcgctt ttgattgaaa aaagtcaagc atgtcacgat tcattgttag attctgtagg
     3421 gcaaacacct atggttcaac ttcatcaact atttccgaaa catgaagtgt ttgcaaagtt
     3481 agagtatatg aatcctggag gcagcatgaa agatcgacct gccaagtaca tcattgaaca
     3541 tggtattaaa catggtttaa tcactgagaa tacacattta attgaaagta cttctggtaa
     3601 tttaggcatt gcgttggcaa tgatagctaa aatcaaggga ttaaaactca cgtgtgttgt
     3661 tgatcctaaa atatcaccaa caaatttgaa aattattaaa agttatggtg ccaatgtaga
     3721 aatggttgaa gaacctgatg cacatggggg ttatttaatg actcgtattg caaaggtgca
     3781 agaactgtta gccactattg acgatgcata ttggattaat caatatgcga atgagttaaa
     3841 ttggcaatcc cattatcatg gtgcaggcac agagattgtt gaaacaatta agcaacctat
     3901 agattatttt gtcgcgccag tcagcacgac aggtagcatt atgggtatga gtagaaaaat
     3961 aaaagaagtg catccaaacg cacaaattgt tgctgttgat gcgaaagggt cagtcatttt
     4021 tggtgacaaa cctattaata gagaattacc tggtatcggt gctagtcgtg tacccgaaat
     4081 attgaataga tcagaaatta atcaagtgat ccatgtagat gattatcaat ctgctttggg
     4141 ctgtcgaaaa ctgattgatt atgaaggcat atttgccgga ggttcaacag gttcgattat
     4201 tgcagcgatt gagcagttga taacgtcaat tgaagaaggt gcaacaattg tcacgatttt
     4261 accagatcga ggcgatcgtt acttagattt agtttattca gatacatggt tagaaaaaat
     4321 gaaatcaaga caaggagtta aatcagaatg aatagagaga tgttgtattt aaatagatca
     4381 gatattgaac aagcgggagg aaatcattca caagtttatg tggacgcatt aacagaagca
     4441 ttaacagcgc atgcgcacaa tgattttgta caaccgctta agccgtattt aagacaggat
     4501 cctgaaaatg gacacatcgc agatcgaatt attgcaatgc caagccatat cggtggagaa
     4561 cacgcaattt caggtattaa gtggataggt agtaagcacg acaatccatc gaaacgtaat
     4621 atggagcgtg caagtggtgt cattattttg aatgatccgg aaacgaatta tccaattgca
     4681 gttatggaag caagtttaat tagtagtatg cgtactgcag cagtttcagt gattgcagct
     4741 aagcatttgg ctaaaaaagg atttaaagac ttaacaatca ttggatgcgg gctaatcgga
     4801 gacaagcaat tacaaagtat gttagagcaa ttcgatcata ttgaacgcgt gtttgtttac
     4861 gatcaattct ctgaagcatg tgcacgcttt gttgatagat ggcaacaaca gcgtccggaa
     4921 attaatttta ttgcgacaga aaatgctaaa gaagcagtat caaatggtga agtagtcatt
     4981 acatgtaccg taacggatca accatacatt gaatatgatt ggttacaaaa gggtgcattt
     5041 attagcaaca tttctatcat ggatgtgcat aaagaagtct ttattaaagc tgacaaagtc
     5101 gtagtagatg actggtcaca atgtaatcga gaaaagaaaa ctattaacca attggtgtta
     5161 gaaggtaaat tcagcaaaga agcacttcat gctgaactag ggcaacttgt gacaggtgac
     5221 ataccaggac gtgaagacga tgatgaaatc atattactta atccgatggg tatggctatc
     5281 gaagatattt caagtgctta ttttatttat caacaggcac aacaacaaaa tattgggaca
     5341 acattgaacc tatattaaga atgcgaggtg tctgaacatt gcagaatcat acagcagtca
     5401 atacagcaca aacgataata ttaagggatt tagttgatgc attattattt gaagatatag
     5461 ccggaattgt atcgaatagt gatattacta aagaaaatgg acaaacgctt ttgatatacg
     5521 aacgtgaaac acaacaaata aagatacctg tttattttag tgctttaaat atgtttcgtt
     5581 atgaaagttc acaaccaatt acgatagagg gaagggcgtc taagcaacca ctaactgcag
     5641 atgaattttg gcaaacaatt gctaatatga attgtgattt aagtcatgaa tgggaagtgg
     5701 ctcgcgttga agaaggactg actactgctg ccacacagct tgctaaacaa ttatcagaat
     5761 tagatttagc gtcacatcct tttgtgatgt cagagcagtt tgcaagttta aaagatcgtc
     5821 catttcatcc attagctaaa gaaaaaagag gattaagaga agcggattat caagtgtatc
     5881 aagctgaatt aaatcaatca tttcctttaa tggttgcagc agttaaaaag acacatatga
     5941 ttcatggcga tactgcaaat attgatgaat tagaaaattt gacagcccct ataaaagaac
     6001 aagcgacaga tatgttacat gatcaagggt tatcaataga tgactatgta ctatttcctg
     6061 tacatccttg gcaatatcaa catattttgc cgaacgtctt tgcgaaagag attagtgaaa
     6121 aattggttgt actattaccg ttaaaatttg gagattatct gtcgtcttca agtatgcgtt
     6181 cattaattga tattggcgca ccgtataacc atgtcaaagt accatttgca atgcagtcat
     6241 taggcgcatt aagactaacg cctacgcgtt acatgaaaaa cggagaacaa gcagaacaat
     6301 tattacgtca gcttatagaa aaagatgaag cactagctaa gtatgtcaca gtttgcgatg
     6361 agacagcttg gtggtcatat atgggtcaag acaatgatat tttcaaagat caattaggtc
     6421 atttaactgt tcagctaagg aaatatccag aagtgctagc caaaaatgat acgcaacagc
     6481 tagtgtcaat ggcagcactc gcggcaaata atcgcacctt atatcaaatg atttgtggaa
     6541 aagataatat ttctaaaaat gatgtcatga cgttatttga agatatcgcg caagtctttt
     6601 taaaggtaac actatcattt atgcaatacg gcgcattacc agagttgcat ggtcaaaata
     6661 tattgttgtc atttgaagat ggacgtgtac aaaaatgcgt gttacgtgat catgatactg
     6721 tcagaattta taaaccatgg ctaacagcac atcagctttc attgccgaag tatgtcgtca
     6781 gagaagatac acctaatacg ctaattaatg aagatttgga aacattcttt gcttattttc
     6841 aaacattagc tgtatcggta aatctatatg ccattattga tgcaattcaa gatttatttg
     6901 gtgtaagtga gcatgaactt atgtcgttgt taaaacaaat tttaaaaaat gaagtggcaa
     6961 ctatttcctg ggttacaact gatcagctag ctgtcagaca cattttattt gataaacaga
     7021 cgtggccatt caaacaaatt ttattaccat tgctatatca acgtgatagt ggtggaggta
     7081 gtatgccttc aggtttaact accgtaccaa atccaatggt gacatatgat taatcagtct
     7141 atatggcgca gtaactttcg cattttatgg ctcagtcagt ttatagcgat tgctggactg
     7201 acagtacttg tgccattatt gccaatttat atggcatcac tacaaaatct atcagtcgta
     7261 gaaatacagt tgtggagtgg tatagcgatt gctgctcctg ctgtaacgac gatgatagct
     7321 tcgccgatat gggggaagct aggtgataag atcagtcgaa aatggatggt gttaagagcg
     7381 ttacttggtt tggcggtatg cttattttta atggcattgt gtacgacacc attacagttt
     7441 gtacttgtga ggttattgca gggactattt ggtggtgttg ttgatgcatc aagtgcgttt
     7501 gcgagtgcag aggcgccagc tgaagatcgt ggcaaggtat taggaagact gcaaagttca
     7561 gtcagcgcag ggtctcttgt ggggccatta attggcggtg ttacagcttc gatattaggt
     7621 tttagtgcgt tactgatgag tattgccgtt attactttta ttgtctgtat tttcggtgca
     7681 ttaaaattga ttgaaacgac acatatgtca aaatcacaaa caccaaatat taataaaggt
     7741 attcgccgtt catttcaatg tctattatgc acacaacaaa catgtcgatt tattatcgtt
     7801 ggcgttttag caaactttgc tatgtatggc atgctaactg cattatcacc acttgcttca
     7861 tcagtgaatc atacagcgat agatgaccgt agtgtgattg gatttttaca gtccgcattt
     7921 tggacggctt cgatattaag cgcgccttta tggggtcgct ttaatgataa atcatatgtt
     7981 aaatcagtat atatatttgc aacgattgca tgtggttgta gtgcgatact gcaaggttta
     8041 gcgacgaata tagagttttt aatggctgca aggatacttc aaggattaac atatagtgca
     8101 ttgattcaaa gtgtcatgtt tgttgtcgta aatgcgtgtc atcaacaact taaaggcaca
     8161 tttgttggta cgacaaatag tatgttagtt attggccaaa ttattggtag tcttagtggc
     8221 gctgccatta ctagttatac tacaccagct actacgttta tcgttatggg cgtagtattt
     8281 gcagtaagta gtttattttt aatttgttca accatcacta atcaaatcaa cgagcacaca
     8341 ttaatgaaat tatgggagtt gaaacaaaaa agtgcaaaat aaagaattaa tacaacatgc
     8401 agcgtatgcg gctatcgaac gcattttaaa tgaatatttt agagaagaaa atttatatca
     8461 agtgccacct caaaatcatc aatggtctat acaattatca gatctcgaaa cgttaacggg
     8521 tgaatttcgc tattggtctg cgatggggca tcatatgtat catccagagg tatggcttat
     8581 tgatggaaaa agtaaaaaaa taacaactta taaagaagca attgcgcgta ttttgcaata
     8641 tatggctcaa agtgcagata atcaaacggc agtgcaacaa catatggcgc aaattatgtc
     8701 tgacatcgat aatagcattc atcgcacggc gcgttatttg caaagtaaca caatagacta
     8761 cgtagaggat cgctatatcg tttcagaaca atctttatac ttaggtcatc catttcatcc
     8821 gactcctaag agtgcaagtg ggttttcaga agcagattta gagaaatatg cacccgaatg
     8881 tcatacatca ttccaattgc attatttagc tgtgcataaa aatgttctgc tcacgcgcta
     8941 tgtagaaggt aaagaagatc aggttgagaa agtgttgtat caattagcag atataaatat
     9001 atcagagata cctaaagatt ttattttatt accaatacat ccttatcaaa tcaatgtgtt
     9061 gcgacagcat ccacagtata tgcaatatag tgaacaaggt ttaataaaag accttggcgt
     9121 ttccggtgat ttagtgtacc cgacgtcttc ggttagaact gtattttcaa aagcattaaa
     9181 catttattta aaattaccga tacacgttaa aattactaat tttatacgta cgaatgacct
     9241 tgaacagatt gaacggacaa ttgatgccgc gcaagttatc gcatcagtca aagatgaggt
     9301 tgaaacaccc cattttaaat tgatgtttga agaaggatat cgtgcattgt taccgaatcc
     9361 attagggcaa acagttgaac ctgaaatgga tttattaaca aatagtgcca tgattgttcg
     9421 tgaagggata ccgaattacc atgctgataa agatattcat gtattggcgt cattatttga
     9481 aacgatgcct gattcatcga tgtctaagtt atcacaagtg attgagcaaa gtggtttagc
     9541 accagaacca tggcttgaat gttatttgga tcgtacatta ttgccgatat taaagctgtt
     9601 tagtaacaca ggcattagtc tagaagcaca tgtacaaaat acattaattg aattaaaaga
     9661 tggcataccc gacgtatgct ttgtcagaga tcttgaaggc atttgtctat ctagaacgat
     9721 tgctactgaa aaacaacttg tgccaaatgt tgtggcagca tcaagccctg ttgtatatgc
     9781 acacgatgaa gcatggcatc gtcttaaata ttatgttgta gtaaatcact taggacattt
     9841 agtatcaact attggtaaag cgactagaaa tgaagttgtg ttatggcaac ttgtagcgca
     9901 tcgtcttatg acatggaaaa aagaatacgc gaataacgca gtatttgttg actgtgtaga
     9961 agatttatat caaacgccga ccattgcggc taaagcgaat ttgatgagta aattgaatga
    10021 ttgtggtgca aaccctattt atacacatat accaaatcca atttgtcata acaaggaggt
    10081 atcgtattgt gaatcaaaca attcttaatc gtgtaaagac tagagtgatg caccaactgg
    10141 tatcatcact tatttatgag aatattgttg tgtataaagc gtcatatcaa gacggtgtcg
    10201 gtcattttac aatagaagga catgattcag agtatcgttt tactgctgaa aagacacata
    10261 gctttgatcg tatacgtatc acatcaccaa ttgagcgtgt cgtaggagat gaggcagata
    10321 caacaacaga ctatacacaa ttattgagag aagctgtatt tacatttcct aaaaatgatg
    10381 aaaagctaga acaatttatt gttgagttat tacagacaga attaaaagat acacaaagta
    10441 tgcagtatcg agaatcaaac ccaccagcaa cacctgagac atttaacgac tatgaatttt
    10501 atgcgatgga agggcatcag tatcatccaa gttacaaatc acgtttagga tttacgttga
    10561 gtgataattt gaaatttgga cctgattttg taccaaacat taaactgcag tggttagcta
    10621 tcgacaaaga taaagtagaa acgacggtat caagaaatgt tgtagttaaa gaaatgttac
    10681 gtcaacaagt tggtgataag acttatgaac attttgtaca gcaaattgaa gcgtctggca
    10741 aacatgtaaa tgatgttgag atgatacctg tacacccatg gcagtttgaa catgtcatcc
    10801 aagttgattt ggctgaagaa aggcttaatg gcacagtact atggttaggg gaaagtgatg
    10861 agctatatca ccctcaacaa tcgattcgta cgatgtcgcc aatagacacg acaaaatatt
    10921 atttaaaggt accaataagt ataacgaata cttcaacgaa acgagtgttg gcgcctcata
    10981 caattgaaaa tgcagcgcaa attacggatt ggttaaagca gatacagcaa caagatacgt
    11041 atttaaaaga tgaattaaag acagcttttc taggggaagt cttaggacag tcttatttaa
    11101 atacacaact ttcgccttat aaacaaactc aagtttatgg tgcgttaggt gttatatggc
    11161 gtgaaaatat atatcatatg ttaatcgatg aagaggatgc gataccattt aatgcacttt
    11221 atgcgagtga taaggatggt gtaccattca ttgaaaagtg gattaaacaa tatggttctg
    11281 aagcttggac aaagcaattt ttagctgtag cgattcgtcc aatgattcat atgctttatt
    11341 atcacggtat tgcctttgaa tcgcatgcac aaaatatgat gctcattcat gaaaatggtt
    11401 ggcctacacg tattgcctta aaagattttc atgatggtgt tcgttttaag cgtgagcatt
    11461 taagtgaagc tgcttcacac ctgacattaa agccaatgcc agaagcacat aaaaaagtga
    11521 atagtaattc atttattgaa acagatgacg aacgtttagt acgcgacttt ttacatgatg
    11581 catttttctt tattaatatc gccgaaatca tcttatttat tgaaaagcaa tatggtatcg
    11641 atgagcagcg acaatggaaa tgggttaaag acattatcga ggcgtatcaa gaagcatttc
    11701 cagagttgaa taactatcaa catttcgatt tgtttgaacc tacgattcaa gttgaaaagt
    11761 taacgacacg tcgattatta agtgactccg agttaagaat tcatcatgtt acaaatccat
    11821 taggtgtagg aggtataaat gatgcaacaa ctatctctga aacatagatt aaacaatggt
    11881 gattcagttt atggcatttt taattctata ccggacccat tgatgatcga ggttatcgca
    11941 gcaagcgggt atgactttgt tgtgattgat acagaacacg tggcgattaa tgatgagaca
    12001 ctagcgcatt taattcgtgc agctgaagca gcgcatatta taccaattgt acgtgtcact
    12061 gcagtgatag atagagatat cattaaagtg ttggatatgg gtgcgagagg tattattgtg
    12121 ccacacgtta aagatcgtga gacagttgag catattgtga aattaagtcg ttattacccg
    12181 caaggattaa gaagtttgaa tggtggtcgc atggcaagat ttggacgtac accattactt
    12241 gatgcaatgg agatggctaa tgagcatatt atggtgattg ccatgataga agatgttgaa
    12301 ggggttatgg ccattgacga tatagctcaa gtcgaaggtt tagacatgat agtcgaaggt
    12361 gccgcagatt tatcccagtc acttggcata ccatggcaaa cgcgtgatga tcaagtaaca
    12421 tcacatgttc aacatatttt tgaaattgtg aatgcacatg gtaaacattt ttgtgcatta
    12481 ccacgtgaag atgaagatat tgcaaaatgg caggcacaag gtgtacaaac atttatttta
    12541 ggtgatgatc gcggaaaaat atatcgccat ttaagtgcat ctctagcgac gtctaaacag
    12601 aaaggggatg aaggctaatg cgtatagttc aacctgttat tgaacaatta aaagcacaat
    12661 ctcatccagt ttgtcattat atctatgatt tagtcggact ggaacatcat ttgcaacata
    12721 ttacatcgtc attgccgagt aattgtcaaa tgtactatgc aatgaaagca aatagtgaac
    12781 gaacaatcct agatacaatt agtcagtatg ttgaaggatt cgaagttgca tctcaaggtg
    12841 aaatagcaaa aggtcttgct tttaaaccag caaatcatat tatttttggt ggccctggta
    12901 agacagacga ggaactaaga tatgcagtaa gtgaaggtgt tcagcgtatt catgttgaaa
    12961 gtatgcatga attacaaagg ctaaatgcca tcttagaaga tgaagataag acacaacaca
    13021 ttttattgcg tgttaattta gcaggaccat ttcccaatgc aacgttgcat atggcaggac
    13081 gccctacaca atttggtatt tctgaagacg aagttgatga tgtcattgaa gctgcgctcg
    13141 caatgccaaa tattcatcta gatggatttc attttcattc tatttctaac aatttagact
    13201 cgaatttaca tgtcgatgta gtgaaacttt attttaaaaa agcaaaggca tggtctgaaa
    13261 aacatcgatt tccactcaaa catatcaatc ttggtggtgg tataggggtt aactatgcag
    13321 atttaactag ccaatttgag tgggataatt ttgtagaacg ttttaaaaca cttatcgttg
    13381 agcaagaaat ggaagatgtg acattgaact ttgaatgtgg gcgctttatt gtggcacata
    13441 ttggttacta tgtgacagaa gtgctagata ttaagaaagt gcatggtgct tggtatgcca
    13501 ttttaagagg aggtacgcaa caatttagac tgccggtatc ttggcagcat aaccatcctt
    13561 ttgaaattta tcgctataag gacaatccat attcatttga aaaagtttca atttcgagac
    13621 aggacacaac gttagtcggt caattatgta caccgaaaga tgtctttgct agagaagtaa
    13681 agatagacgc aatcagtaca ggcgacgtta ttgttttcaa atatgcaggt gcatacggat
    13741 ggtctatatc acatcacgat ttcttaagcc atccacatcc tgaatttatt tatttaacgc
    13801 aaacaaagga ggatgaataa ctattgaatc atattcatga acatttaaaa ttggtaccag
    13861 tagataaggt tgatcttcac gaaacattcg aacctttaag attggaaaag acgaaaagta
    13921 gtattgaagc agatgatttt atacgtcatc ctattttagt gacagcgatg caacatggta
    13981 gatatatggt tatagatggt gtgcatcggt atacaagttt gaaagcgtta ggatgtaaga
    14041 aagttccagt gcaagaaatc catgaaacac aatattcaat tagtacgtgg caacataaag
    14101 ttccatttgg tgtgtggtgg gaaacgttac aacaagaaca tcgcttgcca tggactactg
    14161 agacaagaca agaagcgcca tttattacga tgtgtcatgg tgatacagaa caatatttgt
    14221 atacaaaaga tttaggcgaa gcacattttc aagtatggga aaaggttgtc gcaagttata
    14281 gtggttgttg ttctgtagag agaattgcac aaggtacata tccttgtctt tctcaacaag
    14341 atgtactcat gaagtatcag ccattgagtt ataaggaaat tgaagcggtt gttcataaag
    14401 gggaaactgt gccagcaggt gtgacacgct ttaatatttc aggacgatgt cttaatcttc
    14461 aagtaccact ggcattgctt aaacaagatg atgatgttga acaactgcgc aattggaagc
    14521 agtttttagc agataagttt gccaatatga gatgctatac tgaaaaagta tacttggtgg
    14581 agcaatagtt ttactgtgat gttgagggaa atatgatgat ttagcgtatt gatagcgaaa
    14641 atataataaa acaatatagt gtggagaact tttgatattt tataaatatt ggagttctcc
    14701 atttttgtat tttg
//
LOCUS       DAKPJH010000064        14204 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.064, whole genome shotgun sequence.
ACCESSION   DAKPJH010000064 DAKPJH010000000
VERSION     DAKPJH010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14204
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.064"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(158..898)
                     /locus_tag="OY092_001686"
     CDS             complement(158..898)
                     /locus_tag="OY092_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HCX1076628.1"
                     /translation="MFNLENDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGL
                     FDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQS
                     LGVITQNIDGLHSDAGSQHVDELHGTLNRFYCNACHKSYTKSDVIDRTLKHCDNCGGA
                     IRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISNFKGDNLIIIN
                     KDRTPYDSDATLVIHDDMVSVVKSLITG"
     gene            1104..1895
                     /locus_tag="OY092_001687"
     CDS             1104..1895
                     /locus_tag="OY092_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCX1076629.1"
                     /translation="MTHRLNKGGNFTLNKHERLDEIAKLVNKKGTIRTNEIVEGLNVS
                     DMTVRRDLIELENKGILTKIHGGARSNSTFQYKEISHKEKHTRQIAEKRFIARKAASL
                     IEDGDTLFFGPGTTVELLAEEVNHHTLTIITNCLPVYKILLEKQTAHFRVYLIGGEMR
                     HITEAFVGEMANAMLEKLRFSKMFFSSNAVNKGAVMTSTLDEAYTQQLALSNSIEKYL
                     LIDHTKVGKEDFTSFCQLNELTAVVMDYEDEEKVETIKTYIEVVD"
     gene            2263..2691
                     /gene="lacA"
                     /locus_tag="OY092_001688"
     CDS             2263..2691
                     /gene="lacA"
                     /locus_tag="OY092_001688"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HCX1076630.1"
                     /translation="MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDAT
                     LAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMI
                     TMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC"
     gene            2707..3222
                     /gene="lacB"
                     /locus_tag="OY092_001689"
     CDS             2707..3222
                     /gene="lacB"
                     /locus_tag="OY092_001689"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HCX1076631.1"
                     /translation="MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPI
                     FGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNAN
                     VIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
                     LEKWDRGEYHD"
     gene            3235..4167
                     /gene="lacC"
                     /locus_tag="OY092_001690"
     CDS             3235..4167
                     /gene="lacC"
                     /locus_tag="OY092_001690"
                     /EC_number="2.7.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HCX1076632.1"
                     /translation="MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTR
                     VLAQVGEPVLASGFIGGELGQFIAKKLDHAGIKHAFYNIKGETRNCIAILHEGQQTEI
                     LEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPV
                     ILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW
                     IIVSLGEQGAFAKHNHTFYRVNIPIISVLNPVGSGDSTVAGITSAILNHENDHDLLKK
                     ANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV"
     gene            4171..5151
                     /gene="lacD"
                     /locus_tag="OY092_001691"
     CDS             4171..5151
                     /gene="lacD"
                     /locus_tag="OY092_001691"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HCX1076633.1"
                     /translation="MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEP
                     TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKG
                     RLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDTEEINIQKKAYIERIGSECVAEDIPF
                     FLEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGF
                     AEGEVVYTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLC
                     GRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATSWKQRK"
     gene            5173..5484
                     /locus_tag="OY092_001692"
     CDS             5173..5484
                     /locus_tag="OY092_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HCX1076634.1"
                     /translation="MNREEVQLLGFEIVAFAGDARSKFLEALTAAQAGDFAKADALIE
                     EGNNCIAEAHRAQTSLLAKEAQGDDIAYSVTMMHGQDHLMTTILLKDLMKHLLEFYKR
                     G"
     gene            5490..7202
                     /locus_tag="OY092_001693"
     CDS             5490..7202
                     /locus_tag="OY092_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HCX1076635.1"
                     /translation="MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSI
                     FLLIAYVPNIFGFKWDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTN
                     QINFISTMLAAMCGFLFLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKR
                     NITIKMPKEVPPNISQVFKDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLF
                     TAADGWIGVTIIFGAFALFWFVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKI
                     ITSGTQMFIVTFGGTGATLVVPFMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAP
                     LVLNPVFFIPFVLAPIVNVWIFKLFVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWS
                     FVLAITLIVVDIIIYYPFLKVYDSEILDEEEGRKESNSDLKEKVAANFDTKKADSILA
                     ASGVSDDAAKASNITEQTNVLVLCAGGGTSGLLANALNKAAEEYHVPVKAAAGGYGAH
                     MDIMKEYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGAEYIKLTRDGQAALDFVQQ
                     QFEN"
     gene            7220..8632
                     /gene="lacG"
                     /locus_tag="OY092_001694"
     CDS             7220..8632
                     /gene="lacG"
                     /locus_tag="OY092_001694"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HCX1076636.1"
                     /translation="MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY
                     TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAE
                     CHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEFCFKEFPEVKYWTTFNE
                     IGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHAL
                     PTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNI
                     TDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQR
                     EFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVH
                     DDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQE
                     RYPKKSAYWYKELAETKEIK"
     gene            8898..9767
                     /locus_tag="OY092_001695"
     CDS             8898..9767
                     /locus_tag="OY092_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000719336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076637.1"
                     /translation="MKKIFVIITTLLAVAIIIGSIITVVFSQRQAQTFKIQQQQFVKK
                     PIPTLFLHGFGGSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPI
                     VKIELENNRQGYLDKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGND
                     KSLPQLNKQVNIAGTFNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKG
                     IEVLNIYGDLKDGTHSDGRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENE
                     NVANELIDFLWKK"
     gene            10050..11051
                     /locus_tag="OY092_001696"
     CDS             10050..11051
                     /locus_tag="OY092_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HCX1076638.1"
                     /translation="MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYIS
                     VDPYMRGRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINH
                     VQADQITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSV
                     VGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYF
                     ENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVS
                     EFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE"
     gene            11285..12292
                     /locus_tag="OY092_001697"
     CDS             11285..12292
                     /locus_tag="OY092_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HCX1076639.1"
                     /translation="MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNP
                     VDTKQRQMEVTQAPRVLGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQL
                     VSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGG
                     VGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHKEDLVRQFKEKEIPLVDY
                     IFCTYNTDLYYNTMIELIKPLGHITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHR
                     TPDMIKQHEYLEDITKNIESGHYQPTTTQVFEGLSPENLYQAHLLLEKQSMIGKLVIN
                     I"
     gene            12599..14161
                     /locus_tag="OY092_001698"
     CDS             12599..14161
                     /locus_tag="OY092_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HCX1076640.1"
                     /translation="MKNKSVSLVFWVSLVICTIFVAFGAIFPKQLEKLTQNITTFIAL
                     HFSWYYLLLVLVILFVCVYILFSRYANITLGEEGEDPEFSLPSWFAMLFSAGMGIGLV
                     FWTTAEPISHAFKLTPIHKAGTQSAINDAMQFSFFHWGIHAWAVYGIVALVFAYFSFH
                     KGYPGLVSATLTPLLGEKAMRGPLGGAIDVLAVIATVTGVAATLGFGALQINEGLHFL
                     FNVPSNFTMQVILIVITTILFTWSAWSGIDKGIKTLSNINMLLAFVVLIGLFIVGPTL
                     YILNTFTNGLGNYIANFFSMSLRIPSGGQKFQWLQNWTIFYWAWWISWAPFVGIFIAR
                     VSKGRTIKEFILGVLFVPALVCFIFFAVFGASAIYLQDNHIADIAKAATETATFATLQ
                     HYPLGFVLSLITLLVIMIFFVTSADSATYVLGMLSSRGDINPKSFVKVSWGIIMALFA
                     IIMIYTGGTQAIQNLLIIAALPFSVVIIAMIWSLLKSLSEEKPRNSNKVLIKHRDPDI
                     LEYRSSKHIDEN"
BASE COUNT         4945 a         2106 c         2751 g         4402 t
ORIGIN      
        1 accaagtcat taaacacgca ataattaaaa ttttccactc attttaattt ggaacttcaa
       61 acgtcgaatt ccaaaaacga aactccaaat tccaaaaacg caactccaaa attaaaagca
      121 tctccctgtt actcgggaaa tgctttttac ctactgatta ccctgttatt aatgatttta
      181 caacggaaac catgtcgtca tgtatgacca aagtagcgtc gctatcataa ggtgttcgat
      241 ctttattgat aataattaaa ttgtcgcctt taaaatttga tattaatcct gcggcaggtt
      301 gtacaacgag tgatgaacct agtacaacaa gggtgtcggc atgttcaatt ttatttaatg
      361 cccgtatgat ggtaggttga tctaacattt caccgtataa tacgatgtcc ggtcgaatgg
      421 cgccaccaca attatcacaa tgtttcaaag ttctatcaat gacatctgac ttcgtataag
      481 atttatgaca tgcattacaa taaaaacgat ttaacgtgcc atgtaattca tcaacatgtt
      541 gacttccagc gtctgagtgc aaaccatcga tattttgcgt gatgacacct aaagattgtt
      601 gattacgttc taattttgca atccaatcat gaacgatatt aggcttcgta tcgacaaata
      661 gtaaacgctt atggcagaaa ttgataaaac cttcaggatc atcttctaaa taatcacggc
      721 ttaacaagta ttctggtgaa agcccatctt ttgaaatttc atcaaataag ccacccattg
      781 aacggaaatc tggaacacca cttgcgacag atacaccagc acctgtgaaa aatgtaatac
      841 gattcgaact atctataata tgttttaatg tctctaaatc attttccaaa ttaaacaccc
      901 catcaaaata atgaatgatt tataacgtct tttgctttta ttatagtata ttcattttac
      961 gattatcaaa agcgcagttt aaacagttct ttttaaaaat gaattataca tataatcgaa
     1021 cagttaaatt atattagttt ttacgcaatt tttattatag aataagcatg tatattaaaa
     1081 ttgatgtcta aacataaagg ataatgaccc atcgcctaaa taaaggaggc aattttacat
     1141 tgaataaaca tgaacgtttg gacgaaattg ctaaactagt gaataaaaag ggcacgataa
     1201 gaacgaatga aatcgtcgaa ggtttaaatg tgtctgatat gacagttcga agagatttaa
     1261 ttgaattgga aaataaaggg attttaacga agattcatgg tggtgcacgc agtaattcaa
     1321 catttcagta taaagaaata tcacataaag aaaaacatac ccgtcaaatt gcagaaaaac
     1381 gatttatagc tagaaaagct gcatcattaa ttgaagatgg ggatactttg tttttcggac
     1441 caggaacaac agtggaacta ttagcagaag aagtcaatca tcatacgctc acaattatta
     1501 cgaattgttt gccggtgtat aaaattttgt tagaaaaaca aacagcacat tttcgtgtct
     1561 atttaattgg tggtgaaatg cgccatatta cagaagcatt tgtaggtgaa atggcgaatg
     1621 ccatgttgga aaaactaaga tttagcaaga tgttctttag tagtaacgca gtaaataaag
     1681 gtgctgtgat gacatctaca ttagatgaag cctatacgca acaactggca ctcagtaatt
     1741 caattgaaaa atacttgtta atcgatcata cgaaagttgg caaagaagat tttacatcat
     1801 tttgtcagtt aaacgaattg actgcagtgg tcatggatta tgaagatgaa gaaaaggtag
     1861 aaacgattaa aacatatatt gaagtagtcg actaaattaa aaatataact gcattgttaa
     1921 aatatgtgtc tatatgctcg taagtgaatg tgaatttgca ttcatttatg ggctattttt
     1981 tatgcaaatt tatgtaaacg ggaacctcga caaagtttta ctacaatttc agacgaatac
     2041 ctaattaaaa caacaccaca gtatgaatgt tcacttattg tttgaaaata tgtcataaac
     2101 aaacagatta taaacatatt atgttgattt attgtttgtt tatgtttata atttaaacgt
     2161 aatcaaattg aaagcctttt ctcaagattt tcataaccta caaataaaca tgtcatattt
     2221 taagaaaggt atttcaaaat taaagtaaaa aggagtctta ttatggcgat tattattggt
     2281 tcagatgaag ctggcaaacg attaaaagaa gtcatcaaat catacttatt agacaataaa
     2341 tatgatgttg ttgacgtaac agaaggacag gaagttgact ttgttgatgc aactttggct
     2401 gtagcaaaag atgttcaaag tcaagaaggt aacttaggta ttgttatcga tgcatttggt
     2461 gcaggtagct ttatggttgc tacaaaaatc aaaggcatga ttgctgctga agtatcagat
     2521 gaacgctctg gatatatgac tagaggccat aacaattcaa gaatgatcac tatggggtct
     2581 gaaattgttg gagacacatt agcgaaaaat gtcgttaaag gttttgttga aggtaaatac
     2641 gatggtggta gacaccaaat ccgtgtagat atgcttaata aaatgtgcta gggaggaaaa
     2701 attactatga agattgcatt aggatgcgac catattgtta cagatacaaa aatgcgtgta
     2761 tctgaatttt taaaatcaaa aggacatgaa gtcattgacg taggaacata cgatttcaca
     2821 agaacacatt atccaatttt tggtaaaaaa gttggcgaac aagttgttag cggtaatgca
     2881 gacttaggtg tttgtatttg tggaacaggt gttggtatta acaatgctgt aaataaagta
     2941 cctggcgttc gttcagcact agtacgtgat atgacatcag ctttatatgc taaagaagaa
     3001 ttaaatgcga acgttattgg ctttggtgga cgtattatag gtgagttatt aatgtgcgat
     3061 attatcgatg catttattaa tgctgaatat aaaccaactg aagagaacaa aaaattaatc
     3121 gctaaaatta aacatttaga aacaagcaat gcagatcaag ctgatccaca tttctttgat
     3181 gaattcttag aaaaatggga cagaggcgaa taccacgatt aagggacgac acatatgatt
     3241 ttaactttaa cattaaatcc atccgttgat atttcatatc cattaacagc attgaaatta
     3301 gatgatgtta atcgtgttca agaagtaagt aaaacagctg gtggtaaagg tttaaatgta
     3361 acaagagtac ttgcgcaagt aggtgagcca gtccttgcga gtggttttat tggcggtgaa
     3421 ttaggtcaat ttattgctaa aaaattagat catgccggta tcaagcatgc attttataac
     3481 attaagggtg aaacacgaaa ctgcattgca attttacatg aagggcaaca aacagaaatt
     3541 ttagagcaag gaccggagat tgataatcaa gaggctgcag gatttattaa acattttgaa
     3601 caattattag aaaaagttga agcagttgct atttcaggta gcttacctaa aggattaaat
     3661 caagattatt atgcacaaat cattgaacga tgccaaaaca aaggtgtgcc tgtaatatta
     3721 gactgctcgg gtgcaacttt gcaaacagtt ttggaaaatc catacaaacc aacagtcatt
     3781 aaaccaaaca tttctgaact atatcaattg cttaaccagc cacttgatga aagtttagaa
     3841 agtttgaaac aggcagtgtc acaaccctta ttcgaaggga ttgagtggat tattgtgtct
     3901 ttaggtgaac aaggtgcatt cgctaagcac aatcatacat tctatagagt gaatattccg
     3961 ataataagtg tattaaatcc ggttggttca ggtgattcta cggttgctgg aattacttca
     4021 gcaattctca atcatgaaaa cgaccacgat ttactaaaaa aagccaatac tttaggcatg
     4081 ctgaatgcgc aagaagcaca aacaggttat gtcaatttaa ataattatga tgatttattc
     4141 aatcaaattg aagttttaga ggtgtaaaaa atgtcaaaat cgaatcaaaa aatcgcatca
     4201 attgaacaat taagtaacaa cgaaggtatc atttctgcat tagcatttga ccaacgtggt
     4261 gctttaaaac gcatgatggc aaaacatcaa actgaagaac caactgtagc tcaaattgaa
     4321 caattaaaag tattagttgc ggaagaatta acacaatatg catcttcaat tttattagat
     4381 cctgaatacg gtttaccagc ttctgatgca cgtaacaaag attgtggatt attacttgct
     4441 tatgaaaaaa ctggttatga cgtaaatgct aaaggtcgtt tacctgactg tttagttgaa
     4501 tggtctgcaa aacgattaaa agaacaaggc gcaaatgctg ttaaattctt actttactat
     4561 gatgtagatg atacagaaga aatcaatatt caaaagaaag catatatcga aagaatcggt
     4621 tcagaatgtg tagctgaaga tattccattc tttttagaag tattaacata cgatgacaac
     4681 attcctgata acggtagtgt tgaattcgca aaagttaagc ctagaaaggt taacgaagca
     4741 atgaaattat tctcagaacc acgctttaac gttgatgtat tgaaagttga agtaccagta
     4801 aacatgaaat atgtagaagg ctttgctgaa ggtgaagtgg tttatacaaa agaggaagcg
     4861 gcacaacact ttaaagatca agatgcagca actcatttac catacattta cttaagtgct
     4921 ggtgtttctg cggaattatt ccaagaaact ttaaaatttg ctcacgaagc tggtgctaaa
     4981 ttcaacggtg tactttgtgg ccgtgctaca tggtctggtg ctgttcaagt atacattgaa
     5041 caaggtgaag atgctgctcg tgaatggtta cgtacaactg gtttcaaaaa tattgatgac
     5101 ttaaacaaag tattaaaaga tactgcgaca tcttggaaac aaagaaaata agtataaaag
     5161 gggattaatg ctatgaatag agaagaagtc caattattag gttttgaaat tgttgcattt
     5221 gcaggggatg cacgttctaa gtttttagaa gcattaacag cagctcaagc tggagatttt
     5281 gcaaaagcag atgcactgat agaagaagga aacaattgca ttgcggaagc gcatagagca
     5341 caaacaagcc tgttggctaa agaagcgcaa ggtgatgata ttgcatatag tgtgacgatg
     5401 atgcatggtc aagaccattt aatgacaaca attttactga aagatttaat gaagcattta
     5461 ttagaatttt ataaaagagg gtgatgacaa tgatgcaaaa attgatcgca caaattgaaa
     5521 aagggaagcc atttttcgag aaattatcac gtaacatata tttaagagcc atccgtgatg
     5581 gatttatttc tgcaatgcct gtcatcttat tctcaagtat ctttctatta attgcatacg
     5641 tgccaaatat atttggtttt aaatgggata aaggcatgga agccatttta atgaaaccat
     5701 ataactatac gatgggactt gtagcatttt tagtagcagg aacgacagcg aaatctttaa
     5761 cagattcatt taatcgtaag ctagaaagta caaatcaaat taactttatt tctacgatgc
     5821 tagcagcgat gtgtggattc ttgttcttag cttctgatcc agccaaagat ggtggattct
     5881 taagtgcatt tatgggaact aaaggtttat taacagcatt cttatcagca tttgtaactg
     5941 ttattgttta taacttctgt gtgaagcgca atattacaat taaaatgccg aaagaagtac
     6001 cgccgaatat ttcacaagta tttaaggact taattccatt ttcagcggta atcatcattc
     6061 tttatgcatt agatttagtc attcgcaaca gctttaaatc aaatgtagcg gaaggtattt
     6121 taaaattatt cgaaccatta tttacagcag cagatggatg gattggtgtc acaattatct
     6181 ttggtgcctt tgcattattc tggtttgtag gaattcatgg tccatcaata gtagaaccag
     6241 caattgcagc cattacatat gcgaatatcg aagcgaactt caagttgctt caagctggag
     6301 aacacgcaga taaaattatt acatcaggta cacaaatgtt tatcgttact tttgggggta
     6361 cgggtgcgac attggtcgtc ccattcatgt ttatgtggat gacgaaatct aaacgaaaca
     6421 aagcgattgg acgtgcatca gttgtaccaa cattctttgg tgtaaacgaa ccaattttat
     6481 ttggtgcacc actagtattg aatcctgtgt tctttattcc atttgtatta gcaccaattg
     6541 ttaacgtatg gattttcaaa cttttcgttg aagtgttagg aatgaatagt tttagtgtga
     6601 atttaccttg gacaacacca ggtccattgg gcattatcat gggtacaggt tttggtttat
     6661 ggtcattcgt actagctatt actttgattg ttgtagatat cattatttac tacccattcc
     6721 taaaagttta tgatagtgaa attcttgatg aagaagaagg acgtaaagaa agtaattcag
     6781 atttaaaaga aaaagttgca gcaaactttg atacgaaaaa agctgattca attttagcgg
     6841 caagtggtgt atcagacgat gcagctaaag cttcaaatat cacagaacaa acaaatgtct
     6901 tagtactttg tgccggtggt ggtacaagtg gattattagc caacgcactt aataaagcag
     6961 ctgaagaata tcatgtgcca gtgaaagcag cagctggcgg atatggcgca catatggaca
     7021 ttatgaaaga gtaccaatta atcattttag cgccacaagt tgcgtctaac tatgaagata
     7081 ttaagcaaga tacagataga ttaggtatta aattagcgaa gactcaaggt gctgaatata
     7141 tcaaattgac acgagatggc caagcagccc ttgatttcgt tcaacaacaa tttgaaaatt
     7201 aagaatagga gtttttcata tgactaaaac attacctgaa gattttattt ttggtggagc
     7261 aacagcagca tatcaagcag aaggtgcgac aaatacggat ggtaaaggtc gtgtagcatg
     7321 ggatacgtat ttagaagaaa actattggta cactgcagaa ccagcgagtg atttttataa
     7381 cagatatcca gtggatttag aattaagtga aaaattcggt gttaatggta tccgtatttc
     7441 aattgcatgg tctcgtatct tcccaaatgg atatggcgaa gttaacccta aaggtgttga
     7501 gtattaccat aagttatttg cagagtgtca taaacgtcat gtcgaaccat ttgtaacatt
     7561 gcatcatttt gatacaccag aagtgttaca caaagatggc gattttctaa atcgtaaaac
     7621 gattgactac tttgtagatt atgctgaatt ttgttttaaa gaattcccag aagtaaaata
     7681 ttggactaca ttcaatgaaa ttggacctat tggtgatggt caatatttag taggtaaatt
     7741 ccctccaggt attaaatatg attttgaaaa agttttccaa tctcatcaca atatgatggt
     7801 tgctcatgca agagcagtaa aattatttaa agatggcggc tatcaaggag aaattggtgt
     7861 tgtacacgca ttgccaacaa aatatccgtt cgatccatca aatcctgaag atgttcgtgc
     7921 agcagaatta gaagatatca tccataataa attcatctta gatgcaacat atttaggtaa
     7981 gtattctcgt gaaacgatgg aaggtgtgca acatatctta tctgttaatg gcggtaaatt
     8041 aaacattaca gatgaagatt atgccatttt agatgcagcc aaagatttaa acgacttctt
     8101 aggtatcaat tactacatga gtgattggat gagaggttac gatggagaat ctgaaatcac
     8161 gcataatgcg acaggtgata aaggcggttc taaataccaa cttaaaggtg tcggacaacg
     8221 tgaatttgat gtcgacgtac ctcgcacaga ctgggactgg atgatctatc ctcaaggttt
     8281 atatgatcaa atcatgcgtg ttgttaaaga ttatcctaac tatcataaga tttatatcac
     8341 tgaaaatggt ttaggatata aagatgaatt tattgaatct gaaaaaacag ttcatgatga
     8401 tgcacgtatt gattatgtaa gacaacattt aaacgttatt gcagatgcta ttaaagatgg
     8461 tgcaaatgtt aaaggttact ttatttggtc attaatggat gtgttctctt ggtcaaatgg
     8521 ttatgaaaaa cgatatggtt tattctatgt cgattttgag actcaagaac gttatcctaa
     8581 gaaaagtgct tattggtaca aagagttagc cgaaacaaaa gaaattaaat aattatagat
     8641 attaaaaggc ctatcagtcg agtgctggta ggtctttatt tatagaaaga gataaattaa
     8701 acatgcatat acatatttat atattaatca atgggtgaca caccattgaa agctaaagaa
     8761 gcaatcaatt aacaaacgtt aacggacaac tttccaaagt catcttaaaa gttaatgatg
     8821 tattcaaaat caactaaagg acatttttaa tcacatcctt tatacttata taaaagacat
     8881 gaatgggagt taaaagtgtg aagaaaattt ttgtaattat tacgacattg ttagcggtcg
     8941 ctattattat aggctctatt attacggtgg tgtttagtca acgacaggca caaacattta
     9001 aaatacaaca acagcaattt gttaaaaagc caattccaac attgttctta catggatttg
     9061 gtggtagtgc caattctgaa aagtttatgg tgaagcaagc agaaaaaaga ggggtaacta
     9121 aagatatcat cactgcttac gtttcaaagg atggtgcagt gacatttaaa gggaaactaa
     9181 gaaaagatgc agtgaatcct attgtgaaaa ttgaacttga aaataacaga caaggctatt
     9241 tggataagaa tgctgcgtgg tttaaaaatg tactgactaa gttacaatct gaatacaatt
     9301 tcgataaatt caactttgtc ggtcactcaa tggggaactt aacatttgca caatatatga
     9361 tgacatatgg taacgacaag tcactgccac agttaaacaa acaagtgaat attgcaggga
     9421 catttaatgg tgttttaaat atgaatgaag atgtcaatga aattacagtt gataaagatg
     9481 gtaaaccaag tcgaatgaat caaccttatc agcaattacg cgtgctaaaa gatatttata
     9541 aaggtaaagg tatcgaagtg ctaaatattt atggagattt gaaagatggt acacattcag
     9601 acggcagagt gtctaatagt tcttcgaaat cattaaaata tttactggga aatagtccga
     9661 aaagttatcg agaatctaaa tatgaaggtg agcctgcaca acatagtcag cttcatgaga
     9721 atgaaaatgt tgctaatgag ttaatcgact tcttatggaa aaaataaagc aactgctagt
     9781 ttttctgggg caaaaaagct tgtaatatta gagcttttca aaaattatct attgtttgag
     9841 agtttccata aaatgtctaa gtcgtaacat tttaaattta tgattatagc aaatataatg
     9901 tggttgaagt tacatgaatg aatcagtgct taagtcaaaa tataacaact aagaatgtat
     9961 ttgcatacag acatcacgaa gacacaattc aaacttaacg cttaagtaac aaataagtaa
    10021 aagtttcaaa taaagaaagg tgattaatga tgcaaaataa acaaattctt tttaacaaaa
    10081 taccagaagg catgcctcaa gaggatacat tcaaaattga agagattgac acgcctaaac
    10141 ttgagagcga tggtgtactt gtacaaacgc tgtatatttc agtggatcca tatatgagag
    10201 gacgtatgac taaggcagat tcgtatgtac agccttttga aattggtaaa ccgattgtta
    10261 gccatgtcgt tgcaaaagta attgattcga cactcgcaga ttataaaaaa ggagatgtcg
    10321 ttgtaggtat gttgccttgg cgaatcatta atcatgtcca agcggatcaa attactaaag
    10381 ttccaacgac agatgtacca cttgatttat atttaagtgt tttaggaatg ccaggacaaa
    10441 cagcatatca tggtctgctt gatattggac aacctaaagc cggtgatact gttgtggttt
    10501 cagctgcatc tggtgctgta ggttcagttg taggtcaaat tgctaagatt aaaggttgcc
    10561 gtgttgtagg tattgcgggt ggcgacaaaa aagtaaatta tttaacagag acactgggct
    10621 ttgacgctgg tattgattat aagaaagagg attttgcaga agcgttagca caagcagtac
    10681 cagatggtat tgatgtttat tttgaaaatg ttggtggtac agttggcgat gaagtattta
    10741 agcatttaaa tcgttttgca cgtgtaccag tatgtggcgc aatttcgtca tataatcatc
    10801 ctgaagccga tatcggacca cgtattcaag gtacgcttat taagaagcaa gtaatgatga
    10861 gaggcttctt agtaagtgaa ttcgccaatg cttttaaaga agctagtgaa cagctcgcaa
    10921 catgggttca agaaggtaaa attcagtcac aagtaaccat tgaagatggt tttgaaaatg
    10981 cgccacatgc atttaaaaat ttatttactg gcgataactt tggtaaacaa gttattaaag
    11041 taacggaata ataaagtata cgttttaaca aactaacttt gttaattgac caaaatttaa
    11101 taatttttta tctaaagcaa atttgttcag taacatggta gaaataagtc taaaatgtaa
    11161 tacgaaagtc gtctgtaatt atttatatat tcagatgaaa aaggagtcat gatgctgcga
    11221 taaaagcaca catggcttct attttgtata ataagaaata agttcataaa tgaggtgaaa
    11281 cgatatgaaa atgataggat ttgaaaagcc ctttaaattg gaagaaggaa atttatttaa
    11341 agtatacgaa caaagaaagc caacgccaga aaacgatgat atcttagtca aagtaaatag
    11401 cattagtgta aatcccgtag atacaaagca acgacaaatg gaagtcactc aagcacctcg
    11461 tgtacttggg tttgatgcta ttggtactgt tgaagctatc ggaccagacg ttacattatt
    11521 tagtccgggt gacgttgtat tttatgctgg atcgccaaat agacaaggat caaatgcgac
    11581 atatcaattg gtttcagaag ctatagttgc aaaagcgcca cacaacataa gcgctaatga
    11641 agcggttagt ctaccgctaa ctggtattac ggcatatgaa acgttttttg atacatttaa
    11701 aatttcacat aatccttctg aaaatgtagg taaatccgtg ttaatcatta atggcgctgg
    11761 gggtgtagga agtattgcca ctcaaattgc taaacggtat ggtttaactg tcattacaac
    11821 agcatcacga caagaaacaa cagagtggtg tgaaaagatg ggagcagata tcgtattgaa
    11881 tcataaagag gatttagtgc gtcaatttaa agaaaaagaa attccattag tagattatat
    11941 attttgtacc tataatacag acttgtatta caatactatg attgaactga taaaaccatt
    12001 agggcatatt acaactatcg tagcttttaa tgaagatcaa gatttaaatg cattaaaatt
    12061 aaaaagtata acatttacac atgaatttat gtttgcgcgt ccaattcatc gaacgcctga
    12121 tatgattaaa caacatgagt atttagaaga tattacgaaa aatatagaat caggacatta
    12181 ccaaccaaca acgacacaag tttttgaagg tttatcacct gaaaacttat atcaagcaca
    12241 tctattgttg gaaaaacagt caatgattgg gaaattagta attaatatat agtttagtaa
    12301 gtaaagtcgc cttatgcaga aaatactgta tggggcgact tatttttgtg tctagcgact
    12361 attgattcta aagggaaata tgacaactta gaaggtatca attcaataat gcattagaaa
    12421 ggcattactt aaatacaata aaatactttg ttgttcaatg ataaataatt tgagtatgtt
    12481 ttatatatca tttttaaaag atgaagcatt attaattgtg tctatataaa attacaaatg
    12541 attaaaatgt tgcagttgtg ggtatgaatt taccattaca cagaaagggt ttgtatttat
    12601 gaaaaataaa tcagtaagtc tagtgttttg ggtatcgtta gtgatttgta cgatatttgt
    12661 tgcttttggt gcaatatttc cgaaacagtt agaaaaactc acgcaaaaca ttactacatt
    12721 tattgcgcta catttttctt ggtattattt attgctcgtt ttagttattt tatttgtctg
    12781 tgtgtatatt ttattttcaa gatacgcaaa cattacatta ggtgaagaag gcgaagatcc
    12841 tgaattctca ttgccgtctt ggtttgctat gttatttagt gctggtatgg gaataggact
    12901 tgtgttctgg acaacagcag aaccaatcag tcatgccttc aaattaacgc ctattcataa
    12961 agctggcacg caatctgcaa ttaatgatgc aatgcagttt tcatttttcc attgggggat
    13021 tcatgcatgg gcagtctatg gtattgtcgc gcttgtgttt gcatatttta gctttcataa
    13081 aggatatcct ggcttagtca gcgctacatt gacgccttta ttaggtgaaa aggcaatgcg
    13141 tggaccttta ggtggtgcca ttgatgtatt ggcagtcata gctacagtaa caggcgttgc
    13201 tgcaacatta ggtttcggtg cattgcaaat aaacgaaggt ttacattttt tatttaatgt
    13261 accgagtaac ttcacgatgc aagtaatctt gattgtcatt acaaccatat tatttacttg
    13321 gtcagcatgg tcaggtatcg ataaaggtat caaaacgttg agtaatatca acatgttact
    13381 tgcttttgta gtacttattg gtctttttat tgttgggcca acgctataca ttttaaatac
    13441 atttacgaat ggtctaggta attatattgc aaatttcttt agtatgagtt tacgcattcc
    13501 gtcaggcggt caaaaattcc aatggttaca aaattggaca atcttttact gggcatggtg
    13561 gatatcttgg gcaccatttg taggtatatt tattgcacgt gtgtcaaaag gacgtacgat
    13621 taaagaattt attctaggtg tactttttgt cccggcatta gtttgcttta tattctttgc
    13681 ggtattcggc gcgtcagcaa tttacttaca agataatcat attgccgata ttgctaaagc
    13741 tgcgacagaa acagcaacct ttgcaacgct acaacattac ccactaggtt ttgtattaag
    13801 cttaattact ttacttgtta ttatgatttt ctttgttaca tcagcggatt cggcaactta
    13861 tgttttaggt atgttgagtt caagaggtga tattaatccg aagtcatttg tcaaagtgag
    13921 ttggggtatc attatggcat tatttgcaat tatcatgatc tacacaggtg gtactcaagc
    13981 gattcaaaat ttattaatca ttgctgcgtt accattttcc gtggtcatta tagcgatgat
    14041 atggtcgctt ttaaaatctt tgagtgagga gaaaccgaga aatagtaata aggttttaat
    14101 taaacatcgt gacccagata ttttagaata tcgttcttca aaacatattg acgaaaatta
    14161 attaataatg aggttttatt tacaaaaact agggaatata ttac
//
LOCUS       DAKPJH010000065        14151 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.065, whole genome shotgun sequence.
ACCESSION   DAKPJH010000065 DAKPJH010000000
VERSION     DAKPJH010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14151
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.065"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            95..517
                     /locus_tag="OY092_001699"
     CDS             95..517
                     /locus_tag="OY092_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HCX1076641.1"
                     /translation="MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKIN
                     GCHYCVDIHKKELKELGVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKF
                     EIIDRLKSFYDEEQIIDLVFVVNQINGWNRLNIISDKL"
     gene            complement(629..2167)
                     /locus_tag="OY092_001700"
     CDS             complement(629..2167)
                     /locus_tag="OY092_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HCX1076642.1"
                     /translation="MTSKHQQKGSIVNRFLNSVEKIGNKLPDPSVLFFLMCIGLAIMT
                     WVISLFNVSVKHPGTHQTIYIKNIISHDGFTMIMNDTIKNFSEFPALGLVLAVMIGIG
                     VAEKTGYFDKLMISVVNRAPRFLILPTIILIGILGSTAGDAATIILPPLAAMLFIKIG
                     YHPIAGLTMAYASAVGGFAANIVVGMQDALVYSFTEPATRIVSDSIKTNVAMNWYFIA
                     ASVVVLLPTILLVTTKLIIPRLGKYDDSLMHDDHEETSSHITDKEAHALKWANISFIV
                     TIILLIITAIPEHSFLRNAKTGSLLDDAPLINGVGLIILVVFLVPGLVYGILSKEIKN
                     TKDLGKMFGDAVGSMGTFIVIVFFAAQLLAYLKWSNLGIIAAVKGAKLLEHQNGIVLI
                     LGIIVLSAMVNMLIGSASAKWGILGPIFVPMLILIGFHPAFTQVIYRVGDSITNPITP
                     MMPYLPLLLTYAQKYDKRMKLGALLSSLMPYSIALSIVWTVFVIIWFLLGIPVGPGGP
                     IFVK"
     gene            2402..3220
                     /locus_tag="OY092_001701"
     CDS             2402..3220
                     /locus_tag="OY092_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001620216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1076643.1"
                     /translation="MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAVDIAEAVSE
                     TVDKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDDASGRIHEY
                     PIDVYDKIMNVDMRGTFLMTKMMLPLMMNQGGSIVNTSSFSGQAADLYRSGYNAAKGA
                     VINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLG
                     RLGKPEEVGKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE"
     gene            3484..3849
                     /locus_tag="OY092_001702"
     CDS             3484..3849
                     /locus_tag="OY092_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076644.1"
                     /translation="MLKEKESFRLLYQAIREIADKIGDNQLETNSVSLLLLDFDFEHE
                     VFDELYLAILKYLNTVSIENISHSELLNLIENTIPEDREINTFVKNKIIIGFANNYFP
                     ELQVLANEIKSDMASSLKQ"
     gene            4728..5549
                     /gene="cntK"
                     /locus_tag="OY092_001703"
     CDS             4728..5549
                     /gene="cntK"
                     /locus_tag="OY092_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine racemase CntK"
                     /protein_id="HCX1076645.1"
                     /translation="MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVC
                     CEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCS
                     DLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKAIEIIYETYVHYVIPVKQVTTE
                     IQHLVESYVRKQQWNHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASI
                     GVFNNYQRNDACKDFTVHQPGGSILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE"
     gene            5560..6378
                     /gene="cntL"
                     /locus_tag="OY092_001704"
     CDS             5560..6378
                     /gene="cntL"
                     /locus_tag="OY092_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-histidine (S)-2-aminobutanoyltransferase CntL"
                     /protein_id="HCX1076646.1"
                     /translation="MNNFNNEIKLILQQYLEKFEAHYERVLQDDQYIEALETLMDDYS
                     EFILNPIYEQQFNAWRDVEEKAQLIKSLQYITAQCVKQVEVIRARRLLDGQASTTGYF
                     DNIEHCIDEEFGQCSIASNDKLLLVGSGAYPMTLIQVAKETGASVIGIDIDPQAVDLG
                     RRIVNVLAPNEDITITDQKVSELKDIKDVTHIIFSSTIPLKYSILEELYDLTNENVVV
                     AMRFGDGIKAIFNYPSQETAEDKWQCVNKHMRPQQIFDIALYKKAAIKVGITDV"
     gene            6371..7672
                     /gene="cntM"
                     /locus_tag="OY092_001705"
     CDS             6371..7672
                     /gene="cntM"
                     /locus_tag="OY092_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_096659686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine dehydrogenase CntM"
                     /protein_id="HCX1076647.1"
                     /translation="MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLY
                     QAYKKEKQFEVKIQNEAHQHLEGNFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQ
                     QLSLETLQSVKHVILISPTFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPN
                     HVLTTGVKKKLYMGSTHSNSTMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPP
                     LFMNDFSLKAIFEGTDVPVYVYKLFPEGPITMTLIREMRLMWKEMMAILQAFRVPSVN
                     LIQFMVKENYPVRPETLDEGDIEHFEILPDILQEYLLYVRYTAILIDPFSQPDENGHY
                     FDFSAVPFKQVYKNEQDVVQIPRMPSEDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEA
                     SCQAYKDMHQDQQLSSQFNTNLFEGDKALVTKFLEINRTLS"
     gene            7815..9413
                     /gene="cntA"
                     /locus_tag="OY092_001706"
     CDS             7815..9413
                     /gene="cntA"
                     /locus_tag="OY092_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine-dependent metal ABC transporter
                     substrate-binding protein CntA"
                     /protein_id="HCX1076648.1"
                     /translation="MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDI
                     GDMNPHVYGGSMSAESMIYEPLVRNTKDGIKPLLSKKWDVSEDGKTYTFHLRDDVKFH
                     DGTPFDADAVKKNIDAVQENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAE
                     LAMPRPYVFVSPKDFKNGTTKDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSK
                     LNKVQAKVMPAGETAFLSMKKGETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQP
                     MNTKMLVVNSGKKDNAVSDKTVRQAIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDI
                     NFDMPTRKYDLKKAESLLDEAGWKKGKDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEY
                     LQAEFKKMGIKLNINGETSDKIAERRTSGDYDLMFNQTWGLLYDPQSTIAAFKAKNGY
                     ESATSGIENKDKIYNSIDDAFKIQNGKERSDAYKNILKQIDDEGIFIPISHGSMTVVA
                     PKDLEKVSFTQSQYELPFNEMQHK"
     gene            9426..10361
                     /locus_tag="OY092_001707"
     CDS             9426..10361
                     /locus_tag="OY092_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076649.1"
                     /translation="MFKFILKRIALMFPLVIVVSFMTFLLTYITNENPAVTILHAQGT
                     PNVTPELIAETNEKYGFNDPLLIQYKNWLLEAMQFNFGTSYITGDPVAERIGPAFMNT
                     LKLTIISSVMVMITSIILGVVSALKRGKFTDRAIRSVAFFLTALPSYWIASILIIYVS
                     VKLNILPTSGLTGPESYILPVIVITIAYAGIYFRNVRRSMVEQLNEDYVLYLRASGVK
                     SITLMLHVLRNALQVAVSIFCMSIPMIMGGLVVIEYIFAWPGLGQLSLKAILEHDFPV
                     IQAYVLIVAVLFIIFNTLADIINALLNPRLREGAR"
     gene            10358..11227
                     /locus_tag="OY092_001708"
     CDS             10358..11227
                     /locus_tag="OY092_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076650.1"
                     /translation="MIILKRLLQDKGAVVALGIIVLYVFLGLAAPLVTFYDPNHIDTA
                     NKFAGMSFQHLLGTDHLGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQ
                     GFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
                     QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLG
                     VKAPTAEWGMMLNEARKVMFTHPEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSK
                     DKLRSVKKGVVQS"
     gene            11224..12039
                     /locus_tag="OY092_001709"
     CDS             11224..12039
                     /locus_tag="OY092_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076651.1"
                     /translation="MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGK
                     SITCKSIIGLNPERLGVTGDITFDGKPMLSLSEAQLKKYRGKDIAMVMQQGSRAFDPS
                     TTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLM
                     IALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIA
                     DRVVVMKNGQLIEHGTRESVLHHPKHVYTKYLLSTKKKINDHFKHVMRGDVHD"
     gene            12032..12781
                     /locus_tag="OY092_001710"
     CDS             12032..12781
                     /locus_tag="OY092_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076652.1"
                     /translation="MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGES
                     GSGKSTLSRMILGIEKPDKGCVTLNDHPMHKKKVRRHQIGAVFQDYTSSLHPFQTVRE
                     ILFEVMCQCDGQPKDVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICI
                     NPKYILFDEAISSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFK
                     NGKIEEQIPTSALHKSDNAYTRELIEKQLSF"
     gene            12793..13986
                     /locus_tag="OY092_001711"
     CDS             12793..13986
                     /locus_tag="OY092_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076653.1"
                     /translation="MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVI
                     GIVMGAYMLTAMVFRPWAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARV
                     MQGVCTAFFSMSLQLGIIDALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNIS
                     LFAIVIIFIALTTTFFGYRVTFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGI
                     IMIVASIVFGAVSTFVPLYTVSLGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHP
                     KYMVSVLSLLVIASFVVAFGPQVGAIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVG
                     RNMLLGLFIACADLGISLGGALMGPISDLVGFKWMYLICGMLVIVIMIMSLLKKPTPR
                     PANSL"
BASE COUNT         4844 a         2145 c         2769 g         4393 t
ORIGIN      
        1 caagatgtta tacagaattt caaattctat ccaatattgt tcgaagtgta gtatcactgg
       61 attggtatta aacaatgtaa aggagagatt gcaaatgccg tataattaca agaaacaaaa
      121 tggagagtta atgtctgtaa tgagccaagg tgaaaagttt attcatcaat cacccgttaa
      181 tgatgaactt agtgcattga ttaagttatt aatttctaaa attaacggtt gtcattattg
      241 tgttgatatc cataaaaaag aattaaagga attgggtgta acacaaatga aaattgatga
      301 agtcttgagt tttagacatt tagatttatt tactgatcaa gaaaaagtga cgcttgaatt
      361 tgcagaaatg ttaaattcaa tcaaagactt taagaagttt gaaattattg accggctaaa
      421 atcattttat gatgaagaac aaattattga tcttgtcttt gttgtaaacc aaattaacgg
      481 ttggaacaga ctaaatatta ttagtgataa actataattg ttcatataaa tacagagttt
      541 catctcgagc gctatatcat aacaaatcat gccactatac aggtcaaatc ttgtatagtg
      601 gcattttaat ttatcccttt gaatactgtt atttaacgaa tatcggtcca cctggtccaa
      661 cagggatacc taataggaac caaataatga caaatactgt ccacacaata cttagtgcga
      721 ttgaatacgg cattaaacta gaaagtaagg ctccgagttt catgcgttta tcgtattttt
      781 gtgcataagt taataataaa ggtaagtacg gcatcatcgg tgtaattgga ttggtaattg
      841 aatctcctac acggtaaatg acttgtgtga atgcgggatg aaagccgata aggattaaca
      901 ttggtacgaa tatcggtcct aaaatacccc atttagccga tgcgcttccg attaacatgt
      961 tgaccattgc actcagtacg ataataccta gtatcaatac aataccgttt tgatgttcta
     1021 ataatttggc acctttaaca gcagcgataa ttcctaaatt actccacttt aaatacgcaa
     1081 gtagctgtgc tgcaaaaaac acaataacga taaatgttcc cattgatcct acagcatcgc
     1141 cgaacatttt acctaagtct tttgtatttt taatttcttt gcttaaaatc ccataaacta
     1201 atccaggtac taaaaatacg acaagaataa ttaatccgac accgttaatt aatggcgcat
     1261 cgtctagtaa gctgcctgtt ttagcatttc ttaaaaagct atgttcagga atggctgtaa
     1321 taattaataa aataattgtg actatgaaac tgatatttgc ccattttaaa gcatgtgctt
     1381 ctttgtcagt aatatgtgaa gatgtttctt catggtcatc atgcattaaa ctgtcatcat
     1441 attttcctaa tctaggaata atgagcttag ttgtaactag caatatcgta ggaagtaata
     1501 caacgacact cgctgcgata aagtaccagt tcatagcaac gtttgtttta atagaatctg
     1561 aaacgatacg tgttgccggt tctgtaaatg aatagaccaa agcatcttgc ataccaacaa
     1621 ctatatttgc tgcaaatcct ccaacagcgg aagcatatgc catcgttaaa ccagcaatag
     1681 ggtgatagcc aattttaata aaaagcattg ctgcaagcgg cggcaagata attgtcgcag
     1741 catcgccggc tgtactacct aaaataccaa ttaatataat agtcggtaaa attaaaaatc
     1801 gtggtgcgcg attcacaaca gaaatcatta acttgtcgaa gtatcctgtt ttctctgcaa
     1861 caccaatacc aatcatcact gctagtacta agcctaatgc tgggaactct gagaaatttt
     1921 taatcgtatc attcattatc atcgtaaatc catcatggct aattatattt ttaatataaa
     1981 tggtttgatg tgtacctgga tgcttaacag atacattaaa taatgagata acccacgtca
     2041 taatggctaa gcctatacac attaaaaaga ataagacgct aggatctggc aatttatttc
     2101 caattttttc aacactattc aagaaacgat tgacgataga ccccttttgt tgatgttttg
     2161 atgtcatcaa tgattccccc ctttgttaaa tatttaaagt gtaacaaaaa atactctcaa
     2221 aagtaacaat tttcagaaaa tgaaaagact aatattgtta aatattttga gttattcaat
     2281 agaaattgta tagcagagag tagctaagac tgcctggaga cttatctatt aggtttatga
     2341 agcattgaac agtggaaaat aaggactgta agtttaagat atgttgtata ggagtgactg
     2401 aatgaaacgt ttggaaaata aagttgcagt cgtaacagga gcaagtacag gtatcggaca
     2461 agcttctgca atcgctttag ctcaagaagg tgcgtatgta ttggcggtag acatagctga
     2521 agcggtatcg gagactgtcg ataaaattaa aagtaatggt gacaatgcga aggcgtataa
     2581 tgtggatatt tcagatgaac aacaagtggt agactttgtg tctgacataa aggaacagtt
     2641 tggaagaatc gatgtgttgt ttaataatgc cggtgtggat gatgcgtctg gtagaattca
     2701 tgagtatcca atagatgtgt atgacaagat tatgaatgta gatatgcgtg ggacattttt
     2761 aatgacgaaa atgatgttac ctttaatgat gaatcaaggt ggctctattg ttaatacgtc
     2821 ttcattttca ggacaggcag cagatttgta tcgctcagga tataatgctg cgaaaggcgc
     2881 agtgattaat tttacaaaat caatcgcaat tgagtatggt cgtgatggca ttcgatccaa
     2941 tgcaattgca ccaggtacaa ttgaaacccc gttagtagat aaactgacag gtacgagtga
     3001 ggatgatgca ggtaaaacat ttagagaaaa tcaaaaatgg atgactccgc tgggacgttt
     3061 aggtaaacca gaagaagtag gcaagctcgt tgtcttttta gcatctgatg acagttcatt
     3121 tattactggt gaaacaattc gcattgacgg tggtgttatg gcttacacat ggcctggcga
     3181 gatgttgagt gatgattcgt ggaagcggac attggaataa ttgttttaaa atcgatatcc
     3241 agtggaaaat aatttggcat gaagtaggca atgtatgcat attgtcgcaa tgacagacat
     3301 ttaaatcgga gattaattaa tctttgaaaa tcacatattg ttcatttgaa gtgtattgct
     3361 taaagcttgt tttaacgtat tgtaggtcgt gcatctaatt tatcagaatc tcgagttcaa
     3421 acttttggag tatctttaaa ataagctgta ttttgtctat tctaataaat taaggagaat
     3481 tttatgttaa aagaaaaaga aagttttaga ttgctatatc aagctataag agagattgca
     3541 gataaaattg gagataatca gttagaaact aattccgtta gtttattatt attggacttt
     3601 gattttgaac atgaagtatt tgatgaattg tatcttgcga ttttaaaata tttaaataca
     3661 gtaagtatag agaacataag tcatagtgaa cttttgaatt taatagaaaa tacgattcca
     3721 gaagatcgag agattaacac gtttgtaaaa aataaaataa taattggctt tgctaataat
     3781 tatttccctg aattacaagt attagcaaac gaaataaaat ctgatatggc tagttcatta
     3841 aaacaatgat atttttattt aaatttttaa agctttgtac gaaattgtac aaagcttttt
     3901 ttggtgcgta ttgtatgggc aacaacttga cgatgaaaat ccgttacagg attggtaata
     3961 ggaaatgtta gcgaaagaca agggtatcca ttgtagatta acaaaaggac gtttccacaa
     4021 gtgtgggtta ttctcactaa agcaatacgc agagacaact tacgtaaaat tttgaactga
     4081 cgagaacgaa acttctactc aattattgat aaaaattttc aaaaagactt gaatgtgctg
     4141 agaatacgat gtttatggaa ggattatcaa aatataaatg agcattcatt tacaaccttt
     4201 attgacaatg attctcaact aatatagtat ataatcaaat cgtaatagtt acgatttgtt
     4261 ttctgcaact tttttgaagt tttagttgag gtgaaaacag taaaagcatc taagtgaatg
     4321 tagttaacgg acaactgcat tcgcttgtag agccacaaga agcaacttta aataaggttt
     4381 acggttgcat gttgatgcaa caaccgatta ctaagtcatg ctttccactt tgcgggttag
     4441 catgacttac ctaatagatg ggaaactatt aggttcacct tctaaaaaat tacagttata
     4501 gaggaataca gttgcttgct tcgcaccaac tgcataagag cctgagacat aaatcaatgt
     4561 tctatgctct acaaagttat aatggcagta gttgactgaa cgaaaatgcg cttgtaacaa
     4621 gcttttttca attctagtca accttgccgg ggtgggacga cgaaataaat tttacgaaaa
     4681 tatcatttct gtcccactcc ctaaaaatac atctaaagga gtgtcgtatg aatcggcagg
     4741 ttatagaatt ttctaagtat aatccttcgg ggaatatgac gatacttgtt cattcaaaac
     4801 atgatgctag tgaatatgca tctatcgcca atcagttgat ggccgcaaca catgtatgtt
     4861 gtgaacaggt aggctttata gaatcaacac aaaatgatga tggcaatgat tttcacttag
     4921 ttatgagcgg taatgaattt tgcggtaatg cgacgatgtc atatatacat catttgcagg
     4981 aaagtcattt gcttaaagac caacagttta aggtgaaggt atctggctgt tcggatttag
     5041 tgcaatgcgc aattcatgat tgccaatact atgaagttca aatgccacaa gcccatcgtg
     5101 ttgtaccaac aacaattaat atgggtaatc attcatggaa agcaatagaa attatttatg
     5161 aaacatatgt acattatgtg attccagtta aacaagtaac aacagaaatt caacatttgg
     5221 ttgaatcgta tgttcgtaag caacaatgga atcacaaata taaaacagta ggtatgatgc
     5281 tttttgatga acaacgtcaa tttttacagc cattaatcta tataccagaa atccaaagtt
     5341 taatttggga aaatagctgt ggttctggta cagcatcaat tggggttttt aataattatc
     5401 aacgtaatga cgcatgtaaa gattttacag tacatcagcc agggggcagt attttagtga
     5461 catcaaagcg atgtcatcaa ttgggatatc aaacttcaat taaaggacag gttacaactg
     5521 tagctacagg aaaagcatat atagaataag gagcctacaa tgaataactt taataatgaa
     5581 atcaaattga tattacaaca atatttagaa aagtttgaag cgcattacga gcgtgtatta
     5641 caagacgatc aatatatcga agcattagaa acattgatgg atgactatag tgaatttatt
     5701 ttaaatccta tttatgaaca acaatttaat gcttggcgtg acgttgaaga aaaagcacaa
     5761 ttaataaaat cgctgcaata tattacagcg cagtgtgtta aacaagtgga agtcattaga
     5821 gcgagacgtc tattagacgg acaggcgtct accacaggtt actttgacaa tatagaacat
     5881 tgtattgatg aagagtttgg acaatgtagt atagctagca atgacaaatt attgttagtt
     5941 ggttcaggtg catatccaat gacgttaatt caagtagcaa aagaaacagg tgcttcagtt
     6001 atcggtattg atattgatcc acaagccgtt gacctaggac gtagaatcgt taacgtctta
     6061 gcaccaaatg aagatataac aattacggat caaaaggtat ctgaacttaa agatatcaaa
     6121 gatgtgacgc atatcatatt cagctcgaca attcctttaa agtacagcat tttagaagaa
     6181 ttatatgatt taacaaatga aaatgtcgta gttgcaatgc gctttggtga tggcatcaaa
     6241 gcaatattta attatccgtc acaagaaaca gcggaagata agtggcaatg tgtgaataaa
     6301 catatgagac cacagcaaat ttttgatata gcactttata aaaaagcagc tataaaggta
     6361 ggtattacgg atgtctaaat tattaatgat aggcactggt ccggtcgcaa tccaattagc
     6421 gaatatttgc tatttaaaat cagattatga gattgatatg gttggacgtg cctcaacatc
     6481 agaaaaatca aaacgcttat atcaagcgta taaaaaagag aaacaatttg aagtcaaaat
     6541 acaaaacgag gcgcatcaac atctggaagg taattttgaa attaatcgtt tgtataaaga
     6601 tgttaaaaac gttaagggtg aatacgaaac ggttgtcatg gcatgcacag cagatgctta
     6661 ttatgacaca ctacagcaat tgtcgttaga aactttgcaa agtgtcaaac atgtcatttt
     6721 aatatcaccg acatttggtt cgcaaatgat tgtcgaacaa tttatgtcta aatttaataa
     6781 agatatcgaa gtgatttcat tctcaactta tcttggcgat acacgtattg ttgataaaga
     6841 agcgcctaat catgtgttga caacaggtgt aaaaaagaaa ttgtacatgg gatcgacaca
     6901 ttcaaactca acaatgtgtc aacgaatctc tgctttagct gagcaattga agattcaatt
     6961 agaagtcgtt gaatcgccac tgcatgctga aacacgtaac agttcgcttt atgtgcaccc
     7021 accactattt atgaatgact tttcattgaa agccattttc gaaggaacgg atgtaccggt
     7081 ttatgtgtat aagttatttc ctgaaggacc gataacgatg acactaatcc gtgaaatgcg
     7141 tttaatgtgg aaggaaatga tggctatttt acaagcattt agagtgccgt cagtcaacct
     7201 gattcaattt atggtgaagg aaaattatcc agtacgtcct gaaactttgg atgaaggtga
     7261 tattgagcat ttcgaaatct tgccagatat cttacaagaa tatctgcttt atgtaagata
     7321 taccgcaatc ctcattgatc cattttcaca gccagacgaa aacggacatt actttgattt
     7381 ttcagctgta ccatttaagc aagtctataa aaatgaacag gatgttgttc aaattccaag
     7441 aatgccaagt gaagattatt acagaacggc gatgattcag catattggga aaatgctagg
     7501 tatcaaaacg ccaatgattg atcagttcct aactcgctat gaagcaagtt gccaggcgta
     7561 caaggatatg catcaagatc aacaactatc ttctcaattt aatacaaatc tttttgaagg
     7621 agataaggca ctcgtcacaa aatttttgga aatcaataga acgctttcat aataagggtt
     7681 tgaagtttta taatagaaaa aaattattga attatgtttg acatttacat aaaaataagc
     7741 aaataattga gaaaaataat cattacgatt tgattaagta atgcaactta tcaatttaga
     7801 aagaggaaaa gcaaatgaga aaactaacta aaatgagtgc aatgttactt gcatcagggc
     7861 taattttaac tggttgtggc ggtaataaag gtttagagga gaaaaaagaa aacaagcaat
     7921 taacgtatac gacagttaaa gatatcggtg atatgaatcc gcatgtttac ggtggatcga
     7981 tgtctgctga aagtatgata tacgagccgc ttgtacgtaa cacgaaagat gggattaagc
     8041 ctttactatc taaaaaatgg gatgtgtctg aagatgggaa gacatacacg ttccatttga
     8101 gagatgacgt taaattccat gatggtacgc catttgatgc tgacgcagtt aagaaaaata
     8161 ttgacgcagt tcaagaaaac aaaaaattgc attcttggtt aaagatttca acattaattg
     8221 acaatgttaa agttaaagat aagtacacgg ttgaattgaa tttgaaagaa gcatatcaac
     8281 ctgcattggc tgaattagcg atgcctcgtc catatgtatt tgtgtctcca aaagacttta
     8341 aaaacggcac aacaaaagat ggcgttaaaa agttcgatgg tactggtcca tttaaattag
     8401 gtgaacacaa aaaagatgag tctgcagact ttaacaaaaa tgatcaatac tggggcgaaa
     8461 agtctaaact taacaaagta caagcaaaag taatgcctgc tggtgaaaca gcattcctat
     8521 caatgaaaaa aggtgaaacg aactttgcct tcacagatga tagaggtaca gatagcttag
     8581 acaaagactc tttaaaacaa ttgaaagata caggtgacta tcaagttaag cgtagtcaac
     8641 ctatgaatac gaaaatgtta gttgtcaatt ctggtaaaaa agataacgca gtcagtgaca
     8701 aaacagtcag acaagcgatt ggtcatatgg taaacagaga taaaattgcc aaagaaattt
     8761 tagatggtca agaaaaacca gcaactcaat tatttgcgaa aaatgtaaca gatattaatt
     8821 tcgatatgcc aacacgtaag tatgacctta aaaaagcaga atcattatta gatgaagctg
     8881 gttggaagaa aggtaaagac agcgatgttc gtcaaaaaga tggtaaaaac cttgaaatgg
     8941 caatgtacta tgacaaaggt tcttcaagtc aaaaagaaca agcagaatac ttacaagcag
     9001 aatttaagaa aatgggtatt aagttaaaca tcaatggcga aacatcagat aaaattgctg
     9061 aacgtcgtac ttctggtgat tatgacttaa tgttcaacca aacttgggga ttattgtacg
     9121 atccacaaag tactattgca gcatttaaag cgaaaaatgg ttatgaaagt gcaacatcag
     9181 gcattgagaa caaagataaa atatacaaca gcattgatga cgcatttaaa atccaaaacg
     9241 gtaaagagcg ttcagacgct tataaaaaca ttttgaaaca aattgatgat gaaggtatct
     9301 ttatccctat ttcacacggt agtatgacag ttgttgcgcc gaaagattta gaaaaagtat
     9361 cattcacaca atcacagtat gaattaccat tcaatgaaat gcagcataaa taaaggagca
     9421 attagatgtt caaatttatc ttaaaacgta ttgcgctcat gtttccatta gtgattgtag
     9481 taagttttat gacatttcta ttgacgtata ttacaaatga aaatccagct gtgacaattt
     9541 tacatgcaca agggacgcca aatgtaacac cagagttgat tgcagaaacg aatgagaagt
     9601 acggtttcaa tgatccatta ttaattcaat ataaaaattg gttacttgaa gcgatgcaat
     9661 ttaattttgg tacaagctac attacaggtg atcctgttgc tgaacgcatt ggtccagcat
     9721 ttatgaatac attgaaatta acaataattt caagtgttat ggtgatgatt acatcaatta
     9781 ttttaggtgt agttagtgca ttaaaaagag gaaagttcac tgatcgtgcg atacgttcag
     9841 tggctttctt tctaactgca ttaccatcat attggatagc ttcaatactt attatttacg
     9901 tttcagtgaa gttaaacata ttgccgactt ctggattaac aggtccagaa agttacatat
     9961 tgccagtgat cgttattacg attgcctatg ctggtattta ctttagaaat gttagacgct
    10021 cgatggtgga acaattaaat gaagattatg tactttattt aagagcaagc ggtgtgaaat
    10081 ctatcacatt aatgttgcat gtgttgcgta atgctttaca agttgcggta tcaatctttt
    10141 gtatgtctat accaatgata atgggtggac tagttgttat cgagtatatc tttgcatggc
    10201 ctggactagg tcaattaagt ttaaaagcaa tacttgaaca tgattttcca gttattcaag
    10261 catatgtatt aattgtagcg gtattattta ttatatttaa tacattagca gatatcatta
    10321 atgcgctatt aaatccaaga ttaagggagg gcgcacgatg ataattttaa aacgattatt
    10381 acaagataaa ggtgcagtgg ttgctttagg cattattgta ttatatgtct ttttaggatt
    10441 agcagcacca cttgtgacat tttatgatcc taaccatatc gatacagcaa acaaatttgc
    10501 tggcatgagt tttcaacatc tactaggtac tgaccattta ggtagagata ttttaactag
    10561 gttaatttat gcgattagac caagtttgtt atatgtcttt gttgcgctat ttgtttctgt
    10621 acttattgga tctattttag gattcttatc aggatatttc caagggtttg ttgacgcctt
    10681 aatcatgcgt gcgtgtgatg ttatgttggc attcccaagt tatgttgtaa cgttagcatt
    10741 aattgcattg tttggtatgg gtgccgaaaa tattatcatg gcatttattt tgacgcgttg
    10801 ggcatggttc tgtcgtgtta tacgtacaag tgttatgcag tacactgctt ctgaccatgt
    10861 aagatttgct aaaacaatcg gtatgaatga tatgaaaatt attcacaaac atattatgcc
    10921 gttaacatta gcagatattg ctattatctc tagtagctcg atgtgttcaa tgatcttgca
    10981 aatatctggc ttttcatttt taggattagg tgtcaaagcg cctactgcag agtggggcat
    11041 gatgcttaac gaagctagaa aagtgatgtt tacacatcct gaaatgatgt ttgcgccagg
    11101 tattgccata gtgattatag tgatggcatt taacttctta tccgatgctt tacaaattgc
    11161 cattgatccc cgcatctctt ctaaagataa acttcgttct gtgaaaaaag gagtggtgca
    11221 atcatgacat tgttaacagt taagcatttg acgattacag atacctggac agatcaacca
    11281 ctcgtgagtg atgtgaattt tacattaact aagggtgaaa ctttaggcgt tattggagaa
    11341 agtggtagtg gtaaatcaat cacttgtaaa tcgattattg gtttgaatcc cgaacgactc
    11401 ggggtgacag gtgatataac ctttgatggt aagccaatgt tgtcgttatc cgaagcacaa
    11461 ttgaaaaaat accgtggtaa agatattgcg atggtcatgc aacaaggtag tcgtgcattt
    11521 gatccatcga caacagtagg taaacaaatg tttgagacta tgaaagtaca tacgtcaatg
    11581 tctacacaag aaattgaaaa gacattgatt gaatatatgg attatttaag tttgaaagat
    11641 cctaaacgta tattaaaatc atacccttac atgttatcag gaggaatgtt acagcgattg
    11701 atgattgctt tagcgttagc tttgaaacca aagttaatca ttgctgatga gccgacaacg
    11761 gctttagata caattacaca atatgatgta ctggaagcat ttatagatat taaaaaacac
    11821 tttgactgtg cgatgatttt catttcacat gatttaacgg ttattaacaa gattgcagat
    11881 cgtgttgttg tgatgaaaaa tggtcaactg attgagcatg gtacgcgtga atcagtcttg
    11941 catcatccaa aacatgttta cacgaagtat ttattgtcaa ccaagaagaa gattaatgat
    12001 cattttaaac atgtgatgag gggtgatgta catgattaaa attaaagatg ttgaaaagtc
    12061 atatcaaagc gcacatgttt ttaagcgtcg tcgaacacct atcgtgaaag gtgtgtcatt
    12121 tgagtgtcca atcggtgcga cgattgcgat tatcggagaa agtggtagcg gtaaatcgac
    12181 gttgagtcgt atgatattag gtattgagaa accggataaa ggttgtgtaa ccttaaatga
    12241 tcatccgatg cataagaaga aagtgagacg tcatcaaatt ggtgcagtgt ttcaagatta
    12301 tacgtcatca ttacacccat ttcagactgt tagagaaatc ttatttgaag tgatgtgtca
    12361 atgtgatgga caacctaaag atgttatgga agtccaagca attacattgt tggaagaagt
    12421 cggtctatct aaggcataca tggataaata tcctaatatg ttatcaggtg gagaggcgca
    12481 acgtgttgcg attgcgcgtg caatatgtat taaccctaaa tatattttgt ttgatgaagc
    12541 cattagttca ctcgacatgt caattcaaac acaaatatta gatttattga ttcatttacg
    12601 tgaaacgcgt cagttgagtt atatttttat cacacatgat attcaagctg ccacgtattt
    12661 atgtgatcaa ttaattattt ttaaaaacgg aaaaatagaa gaacaaattc cgacaagcgc
    12721 attgcataaa agtgacaatg cttatacaag agaattaata gaaaaacaac tatcattcta
    12781 aggagtgaga taatgaaagg tgcaatggct tggccctttt tgagattata tatattaaca
    12841 ttgatgttct ttagtgccaa tgcaatctta aacgtgttta tacctttgcg aggtcatgat
    12901 ttaggcgcaa cgaatacggt tatcggtatc gttatggggg catacatgtt aacagcaatg
    12961 gtatttcgac catgggcagg acaaattatt gctcgtgtcg gtcccattaa agtattaaga
    13021 attattttga ttatcaatgc catagcttta attatttatg gttttactgg cttagaaggt
    13081 tatttcgtag cacgtgttat gcaaggtgtg tgtacggcat tcttttctat gtctttacag
    13141 ctaggtatta ttgatgcatt accagaggaa catcgttctg aaggtgtatc attgtactcg
    13201 ctattttcaa cgattccaaa cttaatcggc ccattagttg ccgtaggtat ttggaatgca
    13261 aataatattt cactatttgc aattgtcatt atctttatcg cattaacaac aacattcttt
    13321 ggctatcgcg tgacctttgc tgaacaagaa cccgatacgt cagataagat tgaaaaaatg
    13381 ccatttaacg ctgtaactgt ttttgcgcaa tttttcaaaa ataaagagtt gttgaacagt
    13441 ggtattatca tgattgttgc atcgattgta tttggtgcag ttagtacatt tgtaccgtta
    13501 tacacagtga gtttaggatt cgcgaatgcg ggaatctttt tgacaataca ggccatcgca
    13561 gttgttgcgg caagatttta cttaaggaaa tacattccgt cagatggtat gtggcatcct
    13621 aaatatatgg tatctgtact atcattatta gtgatcgcgt catttgtagt ggcatttggt
    13681 ccgcaagtag gtgcaattat tttctatggt agtgcgatat taataggaat gacgcaagca
    13741 atggtgtacc caacattaac atcatactta agtttcgtct taccaaaagt aggtcgtaat
    13801 atgttgttag gtttatttat tgcctgtgca gacttaggta tatcgttagg tggcgcattg
    13861 atgggaccta tttccgattt agtaggattt aaatggatgt atctaatttg tggtatgtta
    13921 gtcattgtaa taatgattat gagtttattg aaaaaaccaa caccacgccc agcaaatagt
    13981 ctttaatgaa gtgaattaaa gcatattaag ttaatgaata tttaaatttt aaaaggtata
    14041 ttgagcatgg cgattcatgg gagtgggaca gaaatgatat tttcgaaaaa tttatttcgt
    14101 cgtcccaccc caacttgcat tgtctgtgga aattgggaat ccaatttctc t
//
LOCUS       DAKPJH010000066        13982 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.066, whole genome shotgun sequence.
ACCESSION   DAKPJH010000066 DAKPJH010000000
VERSION     DAKPJH010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13982
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.066"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(136..309)
                     /locus_tag="OY092_001712"
     CDS             complement(136..309)
                     /locus_tag="OY092_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NETI motif-containing protein"
                     /protein_id="HCX1076654.1"
                     /translation="MKFKVNENETIADCLSRMKMQGYMPVKRIEKPVFQEQNDGTVEV
                     SHQEIIFVGKKIQ"
     gene            complement(290..892)
                     /locus_tag="OY092_001713"
     CDS             complement(290..892)
                     /locus_tag="OY092_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HCX1076655.1"
                     /translation="MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASV
                     SFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSA
                     EYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFII
                     AYEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK"
     gene            complement(1163..1984)
                     /gene="nadE"
                     /locus_tag="OY092_001714"
     CDS             complement(1163..1984)
                     /gene="nadE"
                     /locus_tag="OY092_001714"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HCX1076656.1"
                     /translation="MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSL
                     VLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEP
                     DEIVTVNIKPAVDQSVESLKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTD
                     HSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKP
                     QLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS"
     gene            complement(1977..3446)
                     /locus_tag="OY092_001715"
     CDS             complement(1977..3446)
                     /locus_tag="OY092_001715"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HCX1076657.1"
                     /translation="MYQLEDDSLMLHNDLYQINMAESYWNDNIHEKMAVFDLYFRKMP
                     FNSGYAVFNGLKRVIDFIEHFGFSESDLEYLKSIGYKDDFLSYLKDLKFTGSIRSMQE
                     GELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQIASNDKLMEFGT
                     RRAQEIDAALWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHAFVQTYGDEYVAFKK
                     YAERHKNCVFLVDTFHTLKSGVPNAIKVAKELGDKINFVGIRLDSGDIAYLSKEARRM
                     LDEAGFTETKIIASNDLDEETITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVA
                     IENEDGSYSDRIKLSNNAEKVTTPGKKNVYRIINKKTGKAEGDYITLENENPYDEQPL
                     KLFHPVHTYKMKFIKSFEAIDLHHNIYENGKLVYQMPTEDESREYLAQGLQSIWDENK
                     RFLNPQEYPVDLSKACWDNKHKRIFEVAEHVKEMEEDNE"
     gene            3630..4706
                     /locus_tag="OY092_001716"
     CDS             3630..4706
                     /locus_tag="OY092_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase oxygenase"
                     /protein_id="HCX1076658.1"
                     /translation="MLFKEAQAFIENMYKECHYETQIINKRLHDIELEIKETGTYTHT
                     EEELIYGAKMAWRNSNRCIGRLFWDSLNVIDARDVTDEASFLSSITYHITQATNEGKL
                     KPYITIYAPKDGPKIFNNQLIRYAGYDNCGDPAEKEVTRLANHLGWKGKGTNFDVLPL
                     IYQLPNESVKFYEYPTSLIKEVPIEHNHYPKLRKLNLKWYAVPIISNMDLKIGGIVYP
                     TAPFNGWYMVTEIGVRNFIDDYRYNLLEKVADAFEFDTLKNNSFNKDRALVELNYAVY
                     HSFKKEGVSIVDHLTAAKQFELFERNEAQQGRQVTGKWSWLAPPLSPTLTSNYHHGYD
                     NTVKDPNFFYKKKESNANQCPFHH"
     gene            4726..5520
                     /locus_tag="OY092_001717"
     CDS             4726..5520
                     /locus_tag="OY092_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HCX1076659.1"
                     /translation="MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADD
                     DTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGSNTISDIKKVY
                     SIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHI
                     EDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIE
                     SRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN"
     gene            5592..5699
                     /locus_tag="OY092_001718"
     CDS             5592..5699
                     /locus_tag="OY092_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076660.1"
                     /translation="MVDFLLFVLFLHDAAVYVSLPLVQAIANVTFYFSF"
     gene            complement(5710..7272)
                     /locus_tag="OY092_001719"
     CDS             complement(5710..7272)
                     /locus_tag="OY092_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HCX1076661.1"
                     /translation="MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFL
                     LTLLFFHPQDLPWKGVYVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQV
                     SSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLS
                     MFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGT
                     LIGTPPLIILKGQYMQHFGHEISFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYL
                     PGGQTLIKQKLDELGNMKYEEKVVQTIFVLASLLWITREFLLKKWEVTSSVADGTIAI
                     FISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGE
                     QLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAP
                     AAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIV
                     LGIDINQPLPLK"
     gene            complement(7477..8574)
                     /locus_tag="OY092_001720"
     CDS             complement(7477..8574)
                     /locus_tag="OY092_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectate lyase"
                     /protein_id="HCX1076662.1"
                     /translation="MYINMKDYGLTGINKTKDTRAIQRALNRGRCKPTTVYIPKGTYD
                     ICKPLTIYGNTTLLLDNETILRRCHSGPLLKNGHRFGFYRGYNGHSHIHIKGGKFDMN
                     GVSYPYNNTAMCIGHAEDIQLIGVTIKNVVSGHAIDACGINGLYIKSCSFEGFIDYSG
                     ERFYSEAIQLDIQVPGAFPKFGTTDGTITKNVVIEDCYFGPSELPEMGSWNRAIGSHA
                     SRHNRYYENIHIRNNIFEDIQGYALTPLKYKDAFIINNKFINCEGGIRYLGVRDGKNA
                     ADVMTGKDLGSQAGINMNIIGNEFKGSMSKDAIHVHNYNNVKHKDVLIVGNTFNDSTQ
                     SIHLEDIDTVFLSPVEAGIQVTTINIDEIKK"
     gene            8946..9506
                     /locus_tag="OY092_001721"
     CDS             8946..9506
                     /locus_tag="OY092_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HCX1076663.1"
                     /translation="MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNY
                     YQDHIFFLMDLHYLHDIHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFI
                     DKTRYDSFFGTPLDSLLRERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVA
                     SFNQKGHEWALAHFKNSLGAEVEQHV"
     gene            9559..10488
                     /locus_tag="OY092_001722"
     CDS             9559..10488
                     /locus_tag="OY092_001722"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HCX1076664.1"
                     /translation="MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVS
                     AETQFALDTFNVPAPELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIAN
                     FETAGPLCYRAEPVGCTATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQ
                     QDVKAAEELKDIAKVDIQKYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQ
                     VNAVDLDEVLNRKEDLEKEMLAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGE
                     AFNVQLEDDMAFLSGVVSRKKQIVPQITEALTK"
     gene            complement(10683..10856)
                     /locus_tag="OY092_001723"
     CDS             complement(10683..10856)
                     /locus_tag="OY092_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076665.1"
                     /translation="MNVVAVNFKWSFELYMLKVENRAMNRVHNNIYNFNHNEKGRKKT
                     KIYTQHRKYFKKM"
     gene            10908..12287
                     /locus_tag="OY092_001724"
     CDS             10908..12287
                     /locus_tag="OY092_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HCX1076666.1"
                     /translation="MNIIEQKFYDSKAFFNTQQTKDISFRKEQLKKLSKAIKSYESDI
                     LEALYTDLGKNKVEAYATEIGITLKSIKNARKELKNWTKTKNVDTPLYLFPTKSYIKK
                     EPYGTVLIIAPFNYPFQLVFELLIGAIAAGNTAIIKPSELTPNVARVIKRLINETFDA
                     NYIEVIEGGIEETQTLIHLPFDYVFFTGSENVGKIVYQAASENLVPVTLEMGGKSPVI
                     VDETANIKVASERICFGKFTNAGQTCVAPDYILVHESVKDDLITALSKTLREFYGQNI
                     QQSPDYGRIVNLKHYHRLTSLLNSEQMNIVFGGHSDEDERYIEPTLLDHVTSDSAIMQ
                     EEIFGPILPILTYQSLDEAIAFIHQRPKPLSLYLFSEDENATQRVINELSFGGGAIND
                     TLMHLANPKLPFGGVGASGMGRYHGKYSFDTFTHEKSYIFKSTRLESGVHLPPYKGKF
                     KYIKAFFKN"
     gene            complement(12407..13435)
                     /locus_tag="OY092_001725"
     CDS             complement(12407..13435)
                     /locus_tag="OY092_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HCX1076667.1"
                     /translation="MTNGYIGSYTKKNGKGIYRFELNENQSRIDLLETGFELEASTYL
                     VRNNEVLYGINKEGEQCGVASLKIDDNGELHLLNKCLSSKAGTGCYVSISEDKRYLFE
                     AVYGAGIIRMYELNTHTGEIIRLIQELAHDFPTGTHERQDHPHAHYINQTPDGKYVAV
                     TDLGADRIVTYKFDDNGFEFYKESLFKDSDGTRHIEFHDNGKFAYVVHELSNTVSVAE
                     YNDGKFEELERHLTIPENFDGDTKLAAVRLSHDQQFLYVSNRGHDSIAIFKVLDNGQH
                     LELVTITESGGQFPRDFNIASSDDLLVCAHEQGDSVVTVFERNKETGKITLCDNTRVA
                     SEGVCVIF"
     gene            complement(13894..>13982)
                     /locus_tag="OY092_001726"
     CDS             complement(13894..>13982)
                     /locus_tag="OY092_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillinase repressor BlaI"
                     /protein_id="HCX1076668.1"
                     /translation="VLNFAKNEELNNKEIEELRDILNDISKK"
BASE COUNT         4642 a         2501 c         2031 g         4808 t
ORIGIN      
        1 atgtcccaag ccctttctca tacaatatga atctagcatc ttgcatgtat aaacaaatag
       61 gctatccaaa gtaaaattac tcaaactttg aatagccttt cctattcaaa tagtctttat
      121 ttaaattgga ttatgttatt ggattttctt acctacaaaa atgatttctt gatgtgatac
      181 ttcaaccgtg ccatcatttt gctcctgaaa cacgggtttt tcaatacgtt ttaccggcat
      241 atacccttgc attttcattc gtgacaaaca atcagcaatt gtttcgttct catttacttt
      301 gaatttcatg ttctactaca ctttccagtt cttctggttc ataatcttta agctttctac
      361 gacgaatgcc tttagtccag aatccaccat gtatgtttcg aggttcatac gcaatgataa
      421 atgctttcgg atctaaattt tttatcgtat ccatcaattt acgttcatat tttcttggtg
      481 ttaaaatttg catcaccata cgactaccat ctctaccaaa cgcagcatag tgcgtaacgc
      541 catatcctaa atttcgaagt tcattcggca aatctaactc atattctgct gaagttacat
      601 ttacaactgt ataacctaat gccagttttt cttctatttt cataccaaca atgataccta
      661 ttgaaaaacc aaatgcgtag gcaataatat tttgaatatg gtctaaatta gacataacca
      721 aacctaaacc aacgatataa actaatactt ctaaaaaact aactgatgca gcaatataac
      781 gataaccttt caacgttaaa attgttcgca tcgttaaaaa cgttacataa caaacgttaa
      841 tgataaatat agttagtacc attaaccatg gattttctgt tacgaatgac ataaggcgcc
      901 ccactctctt tcaattacac tttaaatacc aaactgcttc aaactaacct taatgaatgc
      961 atattaatat aatatagtac gaaaactctc ataaataaat agcgaatttg tcataaataa
     1021 aaatttattc tcaaatgaac atacttactt tagttcatac actttcaatt tatacactga
     1081 agtagtctag ctgaatgtgg tttaatgtta ttaattctaa ctcatattta atttaagtca
     1141 cacgttagaa gaaaaaatta aattaggatt ttggccacgt gtatcttgta tatgcaagtt
     1201 cacgtttgtg tgcatttcgt atataatgat tttcaattac tttttgttct tctggcgtaa
     1261 ctggcttacc ttctaaataa ttatcaatcg cctcataagt tacacctaat gcatcttcat
     1321 ctggaagctg tggtttatca tcttctaaat cagcagttgg cgttttttca tataattcct
     1381 ttggcgcacc aagatacgct aataattgac gaccttgtcg tttattcaaa ccaaatatag
     1441 gtgcgatatc tgcagcacca tcaccgtact tcgtataaaa accagttata ttttcagctg
     1501 aatgatctgt tcctactaca ataccttgtc ggtttgaagc aattgaaaat tgtactttca
     1561 tacgttcacg cgctttttca tttccttttt ggaaatctgt aagaacaata ccggcttctt
     1621 ttaatgattc cacactttga tcaactgcag gtttaatatt tacagttact atttcgtctg
     1681 gttcaatgaa tcgcaaagct tgctcaactt catcagcatc tttttgaact ccataaggta
     1741 atttaactgc aataaacgta caatcaatgc cttcttcacg taattcgtta acagacattt
     1801 gtactaattt tccaactaat gtagaatctt gtcctcctga aatacctaac actaaagatt
     1861 ttataaatga atgtgattgt acataatttt ttataaattg ctttaattcc ataatttctt
     1921 cagcactatc gatacgcttt ttcactttca tttcttgtac aataacgtct tgtaatttac
     1981 tcattatctt cttccatctc cttaacgtgt tccgcaactt caaaaatacg tttatgttta
     2041 ttatcccaac atgccttgct taaatcgact ggatattctt gtggattcag gaaacgctta
     2101 ttttcatccc aaatagattg taatccttgt gctaaatatt cacgtgattc atcttctgtt
     2161 ggcatttgat atactaattt accattttca taaatattat gatgcaaatc aatggcttcg
     2221 aaagatttta taaatttcat tttataagta tgcactggat ggaataattt taaaggttgt
     2281 tcatcgtatg gattttcatt ttccaaagta atataatcgc cttctgcctt acctgttttc
     2341 ttgtttataa tgcgatatac atttttctta cctggcgtcg taaccttttc agcgttattt
     2401 gataatttaa tacgatcact atatgaacca tcttcatttt caatagctac aagtttatat
     2461 actgcaccta atgctggttg atcatatcct gtaatcagct ttgtaccaac gccccaagaa
     2521 tctacttttg caccttgtgc tttcaaactc gtaatcgttt cttcatccaa atcattagac
     2581 gcgataattt tagtttcagt aaatcctgct tcatcaagca tacgtcttgc ctctttagat
     2641 aaataagcga tatctccaga atctaatcga atacctacaa agttaatttt gtcacctaat
     2701 tcttttgcaa cttttattgc atttggcacg ccagatttta aagtatggaa tgtatctact
     2761 aggaacacac aatttttatg tctttcagca tattttttga aggcaacata ttcgtctcca
     2821 taagtttgga caaatgcatg tgcatgtgta ccagacacag gtataccaaa taatttaccc
     2881 gccctaacat tacttgtaga atcaaagccc ccgatgtaag cagctctagc gccccacaat
     2941 gctgcatcaa tttcttgcgc acgacgtgta ccaaactcca ttaatttatc atttgatgca
     3001 atttgacgaa ttctactagc ctttgttgta attagtgtat ggaaatttac aatgtttaat
     3061 aaaattgttt ctattaattg cgcttgaatc aatggtgctt ctacgcgtaa caatggttcg
     3121 ttaccaaagc ataattcgcc ttcttgcatc gaacggatgc tacctgtgaa ttttaaatct
     3181 tttaaatatg ataagaaatc atccttgtag ccaatagact ttaaatattc caaatcagat
     3241 tctgaaaatc caaaatgttc tataaaatca atgacgcgtt ttaaaccatt aaaaacagca
     3301 tagccactat taaatggcat ttttctaaaa tacaaatcaa atacagccat tttttcatga
     3361 atattatcat tccaataact ttcagccata tttatttgat ataagtcatt atgtaacatt
     3421 aaactgtcgt cttctaattg gtacactcgt atctctccaa tcgacctaaa tattttctta
     3481 cattttatca taattcattt ttttatatac ataagagccc cttaatttcc atacttttaa
     3541 ttaaaatcaa ccaacaattt aatgacatat acataatttt taagagtatt ttaataatgt
     3601 agactataat ataaagcgag gtgttgttaa tgttatttaa agaggctcaa gctttcatag
     3661 aaaacatgta taaagagtgt cattatgaaa cgcaaattat caataaacgt ttacatgaca
     3721 ttgaactaga aataaaagaa actgggacat atacacatac agaagaagaa cttatttatg
     3781 gtgctaaaat ggcttggcgt aattcaaatc gttgcattgg tcgtttattt tgggattcgt
     3841 taaatgtcat tgatgcaaga gatgttactg acgaagcatc gttcttatca tcaattactt
     3901 atcatattac acaggctaca aatgaaggta aattaaagcc gtatattact atatatgctc
     3961 caaaggatgg acctaaaatt ttcaacaatc aattaattcg ctatgctggc tatgacaatt
     4021 gtggtgatcc tgctgaaaaa gaagttacac gcttagcaaa tcacttaggt tggaaaggaa
     4081 aaggtactaa ttttgacgtg ttaccactaa tttaccaatt acctaatgag tcagttaaat
     4141 tttacgaata tcctacttca ttaattaaag aagtacctat tgaacataat cattatccaa
     4201 aattaagaaa attgaactta aaatggtatg cagtccctat catttccaat atggacttaa
     4261 aaatcggtgg cattgtatat ccaactgccc cctttaacgg ttggtatatg gtaactgaaa
     4321 ttggcgtacg taactttatt gatgattacc gttacaattt actagaaaaa gttgcagatg
     4381 cgtttgaatt tgatacactt aaaaataatt catttaataa agatcgagca cttgttgaat
     4441 tgaactatgc tgtgtatcat tcctttaaaa aagaaggcgt atcaattgtc gatcatttga
     4501 ccgctgcaaa gcaattcgaa ctattcgaac gtaatgaagc acaacaaggt cgtcaagtta
     4561 ccggaaaatg gtcttggcta gcgccgccat tatctccaac attgacgtca aattatcatc
     4621 acggatatga caatacagta aaagatccaa actttttcta taaaaagaaa gaatcaaatg
     4681 ctaaccagtg ccctttccat cattaagtta gtagaggtgt agcatatgca attatattat
     4741 ttaggcccta aaggtacatt ttcatatttg gcttgtcgtc agtatttttc tgaaaatgaa
     4801 gcaacttttc aaccaaagtc aaatttattt gaagtcatca aggcagttgc agatgatgac
     4861 acatcgattg gtgttgtccc tattgaaaat tctatagaag gaacaatcaa cattgtggca
     4921 gatgcacttg cacagcaaga tgtctttgca cacggtgaaa tacgtctaga tattaacttt
     4981 gcattatatg gtaatggttc gaacaccatt tctgatatta aaaaagtgta ttctattgca
     5041 ccagcaatca gtcaaacaac aaattacata catcaacatc aatttgacta tgattatgtc
     5101 gacagtacaa ttcaaagttt gactaaaatt gaaaatggcg ttgcagcaat tgcaccttta
     5161 ggtagtggcg aagcttatgg ttttacacct attgatacac atattgaaga ctatccacat
     5221 aacgtgacac gttttttagt tataaaaaat cagcagcaat ttgatcaaaa tgcgacatca
     5281 ttgatgtttt taattacacc aatgcatgat aaacctgggt tgttagcaag tgtgcttaat
     5341 acatttgctt tgtttaatat taatttatcc tggattgagt ctcgtccttt aaaaacacaa
     5401 ttaggtatgt atcgattttt cgttcaggct gattctgcaa ttacgacaga tataaagaaa
     5461 gtcattgcta ttttagaaac cttagatttc aaagtagaaa tgattggtgc ttttaattaa
     5521 actatatttt ctaggttctg caatttaaat aaaataaaga gtcaaccaag gattaaaata
     5581 gaaatccatc cttggttgac tttcttttgt ttgtattgtt tttacacgat gctgcggtat
     5641 acgtttcgtt accactcgtt caagcaattg ctaatgtaac cttttatttt tcgttctaat
     5701 ctgcaattac tatttcaatg gcagtggttg atttatatca atacctaaaa ctataggcat
     5761 tacataatac acaactaaaa taataattat tgcactgatt aagtttaccc agaatcctac
     5821 tgatgccatt tgtttgatag atattttacc tgaaccaaag ataattgcat tcggtggtgt
     5881 ccctactggt aacatgtatg cacagttagc cgccatagct gcaggtgcca taagtagtaa
     5941 tggatgcaca ccaaccgcaa cagataacgt tgctaaaatc ggtaaaatca tcgttgcagt
     6001 tgcggtatta gatgtcactt cagttaaaaa taggacaaag atagttatga cgattacaat
     6061 aagaatcgga ctgacaccat ttaatgattt caactgttcg cctaaccatt ttgctaaacc
     6121 actttcagaa atacctttcg ctaatgctaa accgccacca aataaaatta agacacccca
     6181 agggagctct tttgcaactt cccagtcaat gatacgtcga tgtttttcag tatttttagc
     6241 tggaataata aataataata ttgatataaa aatagcaatc gtaccatctg caacggatga
     6301 cgtaacttcc cattttttca gaagaaactc tcttgtaatc cataataagc tggcaagtac
     6361 aaagatagtt tgtactacct tttcttcata cttcatattg ccaagctcgt ctagcttttg
     6421 tttaattaac gtctgaccac caggtaaata tttcaaatca tgtctaaacg caacatatct
     6481 taaatagagc caagtaatac ctaacaaaac aatgaccgtt ggaatcccta caatcatcca
     6541 tttagcaaaa ctaatttcat gtccaaaatg ttgcatgtat tgtcctttta aaataattag
     6601 cggcggggtt ccgattaatg tacccaagcc accaatcgta cctgcatagc caattgctaa
     6661 aactagagat ttttcaaact tttgaatact tgtttgattc gtattggctt cttgtaaatc
     6721 atgtgcttcc ttaataattg ctaaaccaat cggaatcatg atcattacag ctgcagtgtt
     6781 cgatacaaac atagataaga atcctgttgc caccatgaat ccaagtaata tttttgaagt
     6841 gcttgcacca attaaattaa taatagtcaa agctactctc gtatgtaaat tccatctttc
     6901 cattgcaatt gccaaaataa atccacctaa aaacaaaaag ataatatcat taccatattc
     6961 ggatgatact tgttctggtg taagtatgtg acctaatggt aataacacaa ttggtaataa
     7021 gctcgttgct gcaataggaa ttgcttcagt aatccaccaa gtcgcaatcc ataaagtaat
     7081 cgctaagaca tatacgcctt tccaaggtaa gtcttgtgga tgaaagaaca ataatgttaa
     7141 taggaaaagt aatggaccta atattagtcc aataagttgt cccgcactaa acggtttctt
     7201 tttctttgat tttgaaaaga atgttaaata ccttttcgat atcattgatt gatgttgatt
     7261 gaaataagcc ataaatttcc ccctcatgat gattatgaca agctacttca actcactata
     7321 ttagagtata gaaagttgtc tatcttgtat tatcattacc gtcaaaatac cccttttatc
     7381 agataattgg gtttattata gcatatttat accgttttat gaatgcgctt tcaaaaatta
     7441 tctactattc ttaatcctaa tgtcatgcga aactttttac ttttttattt catctatatt
     7501 gattgtagta acttgaatac ccgcttcaac aggacttaaa aacactgtat caatatcttc
     7561 taaatgaatt gattgagtcg aatcattgaa tgtattccca acgattaata catctttatg
     7621 tttaacatta ttataattat gtacatgtat cgcatcttta gacattgatc ctttaaattc
     7681 atttccaatg atattcatat ttatgcctgc ttgggaacct aagtcttttc ctgtcatcac
     7741 atctgcagca tttttaccat ctctaactcc taaatatcta ataccaccct cacagttaat
     7801 aaacttatta ttaataatga aagcatcttt atacttcaag ggagttaatg cataaccttg
     7861 tatatcttca aatatattat ttctaatatg aatattctca tagtaacgat tatgtctact
     7921 tgcatgtgag ccaatagcac gattccaact tcccatttcg ggcaattctg aaggtccaaa
     7981 ataacaatct tcgataacga catttttcgt tatcgtacca tctgtcgttc cgaattttgg
     8041 aaaagcacca ggtacttgaa tgtctaattg tattgcttca gaataaaagc gttcgccact
     8101 atagtctata aatccttcaa atgaacagct tttaatatag agtccattaa tcccgcaagc
     8161 atcaattgca tgaccactca ctacattctt aatagtcaca cctattaatt gaatatcttc
     8221 agcatgccca atgcacatag ctgtattgtt ataaggatac gatacgccat tcatatcaaa
     8281 cttgccgcct ttaatatgaa tatgactgtg tccattataa ccacgataaa aaccaaagcg
     8341 atgaccattt tttaataaag gaccagaatg acatcggcgt aaaatagttt cattatccaa
     8401 caaaagtgtt gtattgccat atatcgttaa tggtttgcaa atatcatacg tccctttcgg
     8461 tatataaact gtcgttggtt tacatcttcc acgatttaac gcacgttgta ttgctcgagt
     8521 atctttagtt ttgtttatgc ctgttaaccc ataatctttc atattgatat acataaatcg
     8581 tcatcctttg tctattttct aattactcat atattaacca attattcaaa ttataatcgt
     8641 gttaggttga tttaacagat agtcataaat ctcgtgatgc catctattag catttttata
     8701 ttgaaaacat caacacttga tattagttct aagtttgtca catttaatat tctattacag
     8761 ctattttaaa gctatcgtaa aaacatctta taatatttgt tgattgcgtg atttgctctt
     8821 ccaaaaaagt tgattaatct atatacttaa tctatattta tatattaacc attagggtta
     8881 aaaaatactc tagcatttat gaatagatgg gagtttattt tattattata taggagagat
     8941 gttgaatgac acatcgcgca ctattagttg ttgactattc atatgacttt atcgcagacg
     9001 acggcttact aacatgcggt aaacctggac aaaatattga agattttatt gtttctcgta
     9061 tcaatgactt taattattat caagaccata tattcttttt aatggattta cattatttac
     9121 atgacattca tcatcctgaa agtaaattat tcccaccaca caatatcgta gatacaagtg
     9181 gtagagaatt atacggtaaa gtaggtaaat tatacgaaac aattaaagcg caacctaatg
     9241 tacatttcat tgataaaacg cgctatgatt cgttctttgg taccccgctt gatagtttat
     9301 tgagagaaag aagtattaat caagtcgaaa tcgttggtgt atgtaccgat atttgcgtgt
     9361 tacatacagc aatttctgca tacaacttag gttataaaat ttcagtacct gctgagggag
     9421 tggcttcatt taatcaaaaa gggcatgaat gggcacttgc acatttcaaa aactcattag
     9481 gtgcagaggt agaacaacac gtttaaatcg tgctaaaata attataaaga atacaatata
     9541 caagggagat atttgacaat ggctaaaaca tatattttcg gacataagaa tccagacact
     9601 gatgcaattt catctgcgat tattatggca gaatttgaac aacttagagg taattcagga
     9661 gccaaagcat accgtttagg tgatgtgagt gcagaaactc aattcgcgtt agatacattt
     9721 aatgtacctg ctccggaatt attaacggat gatttagatg gtcaagatgt tatcttagtt
     9781 gatcataacg aattccaaca aagttctgat acgattgcct ctgctacaat taagcatgta
     9841 attgatcatc acagaattgc aaatttcgaa actgctggtc ctttatgtta tcgtgctgaa
     9901 ccagttggtt gtacagctac aattttatac aaaatgttta gagaacgtgg ctttgaaatt
     9961 aaacctgaaa ttgccggttt aatgttatca gcaattatct cagatagctt acttttcaaa
    10021 tcaccaacat gtacacaaca agatgttaaa gcagctgaag aattaaaaga tattgctaaa
    10081 gttgatattc aaaagtacgg cttagatatg ttaaaagcag gtgcttcaac aactgataaa
    10141 tcagttgaat tcttattaaa catggatgct aaatcattta ctatgggtga ctatgtgact
    10201 cgtattgcac aagttaatgc tgttgacctt gacgaagtgt taaatcgtaa agaagattta
    10261 gaaaaagaaa tgttagctgt aagtgcacaa gaaaaatatg acttatttgt acttgttgtt
    10321 actgacatca ttaatagtga ttctaaaatt ttagttgtag gtgctgaaaa agataaagtc
    10381 ggcgaagcat tcaatgttca attagaagat gacatggcct tcttatctgg tgttgtttct
    10441 cgaaaaaaac aaatcgtacc tcaaatcact gaagcattaa caaaataata ctatattact
    10501 gtctaatcat agacatgttg tatttaacta acagttcatt aaagtagaat ttatttcact
    10561 ttcaatgaac tgttttttat ttacgtttga ctaatttaca accccttttc aatagtagtt
    10621 ttcattcctt tagctaccct aacccacaga ttagtgattt ctatacaatt ccccttttgt
    10681 ctttacattt tcttaaaata tttgcgatgt tgagtataaa tttttgtttt cttcctacct
    10741 ttttcgttat gattaaagtt ataaatatta ttatgtacac gattcatcgc tctattttca
    10801 actttcaaca tatataattc gaaagaccat ttaaaattaa cggccacaac attcaaatca
    10861 attaatcact ttttccaaaa taatcatata aggaggttct tttcattatg aatattattg
    10921 agcaaaaatt ttatgacagt aaagcttttt tcaatacaca acaaactaaa gatattagtt
    10981 ttagaaaaga gcaattaaag aagttaagca aagctattaa atcatacgag agcgatattt
    11041 tagaagcact atatacagat ttaggaaaaa ataaagtcga agcttatgct actgaaattg
    11101 gcataacttt gaaaagtatc aaaaatgccc gtaaggaact taaaaactgg actaaaacaa
    11161 aaaatgtaga cacaccttta tatttatttc caacaaaaag ctatatcaaa aaagaacctt
    11221 atggaacagt tttgatcatt gcaccattta actatccttt tcaactagtg ttcgaacttt
    11281 taatcggtgc tattgcagca ggtaatacgg caattattaa accatctgag ttgacaccaa
    11341 atgttgcacg agtgattaaa cgattaatca atgaaacatt tgatgcaaat tacattgaag
    11401 ttattgaggg aggaattgaa gaaacgcaaa cgttaattca cttacctttt gactatgtct
    11461 tctttacagg aagtgaaaat gtaggcaaaa tcgtttatca agctgccagc gaaaatttag
    11521 ttcctgtgac attagaaatg ggcggtaaat ctccagtcat cgttgatgaa acagcgaata
    11581 ttaaagttgc tagtgagcgc atttgttttg ggaaattcac taatgccggc caaacatgtg
    11641 ttgcaccaga ttacatttta gtacacgaat ctgtaaaaga tgatttaatc acagccctat
    11701 caaaaacgtt gcgtgaattt tatggtcaaa atatacaaca aagtccagat tatggccgca
    11761 ttgtaaacct taaacattat catcgtctga cttcattact taacagtgaa caaatgaata
    11821 ttgtatttgg tggtcatagt gatgaggatg aacgttatat agaaccaaca ttgttagatc
    11881 acgttacaag tgattcagca attatgcaag aagaaatttt tggtcctatc ttaccgattt
    11941 taacgtatca gtcattggat gaagcaatag cctttattca ccaaagacca aaacctttga
    12001 gtttatattt atttagcgaa gatgaaaatg ctacacaacg tgtaataaac gagctatcat
    12061 ttggcggcgg cgctattaat gatacattga tgcacctagc gaatcctaaa ttaccatttg
    12121 gtggtgttgg cgcctcaggt atgggacgct atcatggtaa atattcattc gacactttta
    12181 cacatgaaaa aagctacatt ttcaaatcta cacgattaga atcaggtgtc catttaccac
    12241 catataaagg taaatttaaa tacatcaaag ctttctttaa aaattaattt ttgagccaaa
    12301 aataaaccat gcttccataa tttgatgttc ttgaaaacaa taaatttcaa ggtatacata
    12361 aattttttgg aaacatggtt ttctttttat catgattaat taaagattaa aatatgacac
    12421 atacaccttc agatgctaca cgagtgttat cacatagcgt aattttacct gtttctttat
    12481 ttctttcgaa aacagttaca actgaatctc cttgctcatg agcacaaact aaaaggtcat
    12541 ctgatgaggc aatattaaaa tctcttggga attgaccacc actttcagta attgttacta
    12601 gttctaagtg ttgaccatta tcaagaactt taaaaattgc aatgctatca tgccctctat
    12661 tagatacata taagaattgt tgatcatgag ataaacgcac tgctgcaagt ttagtatctc
    12721 catcaaagtt ttcaggaatt gttaaatgac gctcgagctc ttcaaattta ccgtcattat
    12781 attctgcaac actcacagta tttgataatt cgtgtacgac ataagcaaat tttccattat
    12841 catgaaattc aatatgtctt gtcccatcac tatctttaaa taaagattct ttataaaatt
    12901 caaacccgtt gtcatcaaat ttataagtaa cgatacgatc agcacctaaa tctgttactg
    12961 caacgtactt accatctgga gtttgattaa tataatgtgc gtgtggatga tcttgtcttt
    13021 catgtgtacc tgttggaaaa tcatgtgcaa gttcttgaat tagacgtata atttcacctg
    13081 tgtgcgtatt taattcatac atacgtatga tgccagcacc atataccgct tcaaataaat
    13141 atcgtttatc ttctgaaatc gatacataac aacctgtacc agcttttgaa gacaaacatt
    13201 tatttaataa atgcaattca ccattgtcat caattttcaa actcgcaaca ccgcattgtt
    13261 ctccttcttt gttgattcca tataaaactt cgttattacg caccaaatat gtagacgctt
    13321 ctaattcaaa tcctgtttct aataaatcaa tacgtgactg attttcgttt aattcaaaac
    13381 gataaatccc tttaccattc tttttagtgt aagaaccaat atatccattt gtcattactt
    13441 ttacccctcc atgtcagtct tattttcatt ttattaaatt ttagctagaa ttaacaatca
    13501 tttatcattt ccttaacgct aaaactgttt aactacttta aaagaactat ttgctgtgat
    13561 atgtcattat tcgattttaa ttaatccctc ttttttactt acacgagcat taattattaa
    13621 cgcgtttatg cttccacaaa atttttgttg caaaatagaa cacatgttcg tataatgtaa
    13681 ttatcagatt ggggtgaatt aaggatgaca agttatgaag aagaaactga ttatcgtaac
    13741 gttccaagag aattactaga taacaatata cctatgggaa gaggcatgat taaatgggct
    13801 ccgtttatta tatgtactaa tctcataaaa aatctaattt aatagggttc aaacataatt
    13861 tatatatgta ttatgtttga accctatatc tatttatttt ttactaatat catttaaaat
    13921 gtctcgcaat tcttcaattt ctttgttatt taattcttca tttttcgcaa aattaagcac
    13981 ta
//
LOCUS       DAKPJH010000067        13756 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.067, whole genome shotgun sequence.
ACCESSION   DAKPJH010000067 DAKPJH010000000
VERSION     DAKPJH010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13756
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.067"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(132..1793)
                     /locus_tag="OY092_001727"
     CDS             complement(132..1793)
                     /locus_tag="OY092_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HCX1076669.1"
                     /translation="MKFHHRLMLLISSILIISFVTLGIIIHASITYVLSEKHEQALAT
                     DARSYIYLVQDNEIDKVKEIVKQQNIDLLITKNDKKVFSSGKLKATQNSDSYIQKKDV
                     FIFNKKVNGYHVWIKGYNNDITEMHWTLWKYLILTCLVVLICLYFASRSFKRTLIRPI
                     QEVTYATQLLANGYYHIRVPESNVIETKALFVSTNDLARRLQKLNNEQKMQSNRLKTT
                     IENIPSAILMIDRNGKIVVANKAYYEQFNISHNIEQVGYHGYVNTEIEQLILESFKVE
                     KPIYEQLEVAINQVHAKYFDISCVPILTRSQKSLQGILVVMHDITNLKQLENLRREFV
                     ANVSHELKTPITSIKGFAETLIDGAKNDAESLDMFLNIILKESNRIESLVTDLLDLSH
                     IEQHTELDTDYMNLSDLTRRIIDNMMTQANQKNISIHTDIEKDVIVKAQESKIAQVIT
                     NLLTNAINYSYEDGDINVRVYRDDFRVIFEVQDFGIGIKLEDQQRIFERFYRVDKARS
                     RDSGGTGLGLSITKHIVEAHQGNIEVNSQVGKGSTFKVILKDYKE"
     gene            complement(1793..2497)
                     /locus_tag="OY092_001728"
     CDS             complement(1793..2497)
                     /locus_tag="OY092_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1076670.1"
                     /translation="MSQKVLVVDDEHSIVTLLKYNLETAGYEVVVAFDGDEALEKVEN
                     EQPDLIILDVMLPKKDGIDVCKTVRTNKNLVPILMLTAKNDEFDRVLGLELGADDYMT
                     KPFSPREVVARVKAILRRSQFVKEVEEIDDDITIGSIRIRPDYFEVYKHNELLELTPK
                     EFELLLYLIERQGRVITREHMLNTVWNYEFAGDSRIVDVHISHLRDKLEDNPKKPQLI
                     KTVRGLGYKLERPKEQ"
     gene            complement(2887..4155)
                     /gene="icd"
                     /locus_tag="OY092_001729"
     CDS             complement(2887..4155)
                     /gene="icd"
                     /locus_tag="OY092_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HCX1076671.1"
                     /translation="MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAA
                     VEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIR
                     SLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTT
                     EVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLV
                     HKGNIMKFTEGSFKQWGYDLALTEFGDQVFTWQQYDEIVEKEGRDAANSAQEKAEKEG
                     KIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYE
                     TGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIASK
                     VVTYDFARLMDGAEEVSTSAFADELIKNLK"
     gene            complement(4204..5325)
                     /locus_tag="OY092_001730"
     CDS             complement(4204..5325)
                     /locus_tag="OY092_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HCX1076672.1"
                     /translation="MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEE
                     VIFLLWNYRLPNEEELAHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYI
                     AHFDPDAENESDENRYERAMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYM
                     LRGELPTDIEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPL
                     HGGANEQVMTMLSEIGSIENVDAYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSR
                     QITKDAGREELFEMSVKMEKRMAEEKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSR
                     SAGWIAHILEQYKDNRIMRPRAKYIGETNRKYIPLEERK"
     gene            5673..7034
                     /locus_tag="OY092_001731"
     CDS             5673..7034
                     /locus_tag="OY092_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1076673.1"
                     /translation="MAEKLQRELSNRHIQLIAIGGAIGTGLFLGAGQTIALTGPSILL
                     TYIIIGFMLFMFMRGLGEIIIQNTEFKSFADVTNTYIGPFAGFVTGWTYWFCWIITGM
                     AEVTAVAKYVSFWFPEIPNWISALFCVLLLMSFNLLSARLFGELEFWFSIIKIATIIG
                     LIVVGFVMILFAYKTQFGHASFTNLYEHGVFPKGASGFFMSFQMALFSFVGIEMIGVT
                     AGETKNPVKTIPKAINSVPIRILIFYVGALAVIMSIIPWQQVDPDNSPFVKLFALIGI
                     PFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSSQQQAPPNFSKTNKYGVPHVAIFA
                     SSALLLVAALLNYIFPDATKVFTYVTTISTVLFLVVWGLIIIAYINYSRKNPDLHKKA
                     TYKLFGGKYMGYLIFVFFIFVFGLLFINVETRRAIYFIPIWFILLGFMYLRYKRIAAK
                     SNN"
     gene            complement(7384..9141)
                     /gene="pyk"
                     /locus_tag="OY092_001732"
     CDS             complement(7384..9141)
                     /gene="pyk"
                     /locus_tag="OY092_001732"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HCX1076674.1"
                     /translation="MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHK
                     GRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPE
                     KFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNL
                     PGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFP
                     KIENQEGIDNIAEILEVSDGLMVARGDMGVEIPPEKVPMVQKNLIRQCNKLGKPVITA
                     TQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSA
                     EAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYR
                     PHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLI
                     IITAGVPTGETGTTNMMKIHLVGDEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDK
                     VIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNM
                     LVTIDAAQGKIFEGYANVL"
     gene            complement(9163..10131)
                     /gene="pfkA"
                     /locus_tag="OY092_001733"
     CDS             complement(9163..10131)
                     /gene="pfkA"
                     /locus_tag="OY092_001733"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002462395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HCX1076675.1"
                     /translation="MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGL
                     LNDDIHKLELGSVGDTIQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGG
                     DGSYRGAQRISEECKEIQTIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTAS
                     SHARTFIIEAMGRDCGDLALWAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHS
                     IVLVAEGCMTAQDCQKELSQYINVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDL
                     LMQGETAKGVGIKNNKIVATSFDEIFDGKDHKFDYSLYELANKLSI"
     gene            complement(10400..11344)
                     /locus_tag="OY092_001734"
     CDS             complement(10400..11344)
                     /locus_tag="OY092_001734"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HCX1076676.1"
                     /translation="MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERET
                     KKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLN
                     GRAVTVIGQQRGKDTKDNIYRNFGMSHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAY
                     PGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTY
                     SVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQA
                     LAIKSAFVEQLDSLESLSRDEIANDRFEKFRNIGSYIE"
     gene            complement(11344..12201)
                     /locus_tag="OY092_001735"
     CDS             complement(11344..12201)
                     /locus_tag="OY092_001735"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HCX1076677.1"
                     /translation="MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKE
                     LAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQ
                     QKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFI
                     LFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGD
                     INLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEI
                     LKIHQEVTK"
     gene            complement(12396..13625)
                     /locus_tag="OY092_001736"
     CDS             complement(12396..13625)
                     /locus_tag="OY092_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HCX1076678.1"
                     /translation="MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPC
                     KDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGIN
                     GMPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQ
                     HGTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRG
                     AIFEGRSYGMNPTKDVVAKWTNKDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMA
                     DNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLAFPGIFRGALEVEAT
                     HINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIE
                     VDPQDVYDKTMKLTDLQ"
BASE COUNT         4234 a         2687 c         1908 g         4927 t
ORIGIN      
        1 caaatgacaa aattgacaac cgaatttatt ccacttcatt aactctaatt taataccaat
       61 agagatttga acgaaataaa aaagcagcaa caacttcgtg aaaaatacac gcgctgttac
      121 cactttaatt tttattcttt ataatctttt agaataactt tgaacgttga gcctttgcca
      181 acttgactat tcacttcaat attgccttgg tgggcctcta ctatatgctt tgtaattgat
      241 aatccaagac ctgtcccacc agaatctcta cttcgtgctt tatctactct ataaaatctt
      301 tcaaaaatac gttgttggtc ttctaattta atacctatac caaaatcttg tacttcgaaa
      361 atgacacgaa agtcatctcg atacacacga acgttaatat ctccatcttc ataagaatag
      421 ttaattgcat tcgttaacaa attcgtgata acttgagcaa ttttactttc ttgtgcttta
      481 acaatgacat ctttttcaat atcagtatga atggaaatat ttttttgatt ggcttgagtc
      541 atcatattat caataatacg ccgcgttaaa tctgataaat tcatatagtc tgtatctaac
      601 tctgtatgtt gctcaatatg cgataaatct aacagatctg ttactaaaga ttctattcga
      661 tttgattctt ttaaaattat gtttaaaaac atgtctaatg attccgcatc attttttgca
      721 ccatcaataa gcgtttcagc aaacccctta attgaagtaa taggtgtttt taattcatgt
      781 gaaacatttg ctacaaattc acgtcttaga ttttcaagtt gtttcagatt tgttatgtca
      841 tgcatcacaa ctaaaatccc ttgcaaactt ttttgagacc tagttaaaat cggaacgcat
      901 gaaatatcaa agtacttggc atggacttgg tttattgcaa cttccaattg ttcataaata
      961 ggtttttcaa ctttaaaact ttctaaaatt aattgctcaa tttcagtatt aacataaccg
     1021 tgatagccta cttgttcaat attatgcgag atgttgaact gttcataata cgctttattt
     1081 gcaacaacga tttttccatt tcgatctatc attaaaatag cacttggaat attttcaatc
     1141 gttgttttta aacgattgga ttgcattttt tgctcattat taagcttttg aaggcgtcgt
     1201 gctagatcat tggtagacac aaaaagcgct ttagtttcta taacattact ttcaggtaca
     1261 cgtatgtgat aataaccatt tgccaacaat tgtgttgcat aagtaacttc ttgaatggga
     1321 cggattaatg tacgcttaaa actacggctt gcaaaataca gacaaatgag tacaactaaa
     1381 catgtcaaaa taagatattt ccacaacgtc caatgcattt ctgtaatatc gttattgtaa
     1441 cctttaatcc atacatgata accgttaacc ttcttattaa aaataaaaac gtcctttttt
     1501 tgaatatagc tatcactatt ttgagtggct ttcagtttgc cactactaaa caccttttta
     1561 tcatttttag ttatcaataa atctatattt tgctgtttta caatttcttt aactttatca
     1621 atctcattat cttggactaa ataaatatat gatcttgcat ctgttgctag agcttgttcg
     1681 tgtttttctg ataacacata tgtgatggaa gcgtgaataa taatgcctaa tgtaacaaaa
     1741 ctgataatta atatactgct tatcaataac attaagcggt ggtgaaactt catcattgtt
     1801 ctttaggtct ttccaattta tagcctaagc cacgcacagt tttaataagt tgtggcttct
     1861 taggattatc ttctaattta tctcttaaat gactgatatg tacatcaaca attcttgagt
     1921 ctcctgcaaa ttcataattc cataccgtat ttaacatatg ctctctcgta atgactctgc
     1981 cttgtctttc tatcaaataa agcaacagtt caaattcttt cggtgttagc tccaatagct
     2041 cattatgctt atatacttca aaataatcgg gtctaatacg tatcgatccg atggtaatat
     2101 catcgtcaat ctcttctact tcttttacaa attgagaacg tcttaaaatg gctttcacac
     2161 gggcaacaac ttctctaggt gaaaaaggct tagtcatata gtcatcggca cctaattcta
     2221 aacctaatac ccgatcaaat tcatcatttt tcgccgttaa cattaatata gggactaaat
     2281 ttttatttgt tcttacagtc ttacatacgt caatgccatc ttttttaggt agcataacat
     2341 ctaaaataat taaatctggc tgttcatttt ccaccttttc taaagcctca tcaccatcaa
     2401 atgcgacaac aacttcataa ccagctgttt ctaagttata tttaagtaat gttacgattg
     2461 aatgttcgtc atctactacc aacacttttt gcgacatggt atgcctccct aacttataat
     2521 tatatttaca ttataaccga actatttata aaaataacat cctacacatt atctttacac
     2581 attttttaca ttactttaca cataaataaa atacttctta tatttccttc tataatttac
     2641 atgacttact ctgggacaac gaaataaact ttgtgaaaat atcatttcta tgccactacc
     2701 tatgcatgag ttttactcat ttattcctaa acttatgtac acaatcgctt tgtctaatgt
     2761 gtaagaaaca ctatataatc aatcattagt gactctttat tatttctgtc ctgctgccaa
     2821 cttcaattca tttaaaaagg cgaacctagc aattaaagta gctagactca cctaaataat
     2881 tagtatttat tttaaatttt taatcaattc atctgcaaat gctgatgtag aaacttcttc
     2941 agcaccatcc attaaacggg caaagtcata agtaacaact tttgaagcaa ttgtatcttc
     3001 aattgaatct gtaatcttat ctgccgcttc ttgccatcct aaatgttcta acattaatac
     3061 agaacttaaa attactgaag atggattcac tttatttaaa cctgcatatt ttggagctgt
     3121 accatgtgtt gcttcaaaaa tagcatgacc tgtttcataa ttaatgtttg cacctggcgc
     3181 aataccaata ccaccaactt gtgcagctaa agcatctgaa atatagtcac cattcaagtt
     3241 catagttgct acaacatcat gctcagctgg acgagttaaa atttgttgta agaaaatgtc
     3301 agcaatagaa tctttaatga taatcttgcc ttctttttca gctttttctt gtgcagaatt
     3361 agcagcatct ctgccttctt tttcaacaat ttcgtcatat tgttgccaag taaatacttg
     3421 atcaccaaat tcagttaatg ctaaatcgta accccactgc ttaaatgagc cttctgtaaa
     3481 tttcataata ttacctttat gaactaaagt aactgattta cggttattat cgatagcata
     3541 ttgaatagct gctctaacta atcgctcagt accttcttta gaaactggtt taataccaat
     3601 acctgaagtt tctgggaatc gaatgtttgt cgcacccatt tcgttttgta agaagtcaat
     3661 taccttttta acttctgttg taccttcttt aaattcaata ccagcataaa tgtcttcagt
     3721 attttcacgg aaaataacca tatcaacatc ttgtggacgt ttaacaggtg atggtactcc
     3781 tttaaaccaa cgtaccggtc ttaaacaagt aaataaatct aattcttggc gtaaagccac
     3841 atttaatgat ctaataccac caccaattgg tgttgttaaa ggtcctttaa cagcaattaa
     3901 atattcttta attgtatcaa gtgtttcttg aggtaaccat tcgccagttg tatcaaatgc
     3961 tttttggcca gctagcactt ctttccattc aatgcgtttt tcgccattat aagctttctc
     4021 aacagcagca tctatcactc ggcttgctgc cttccaaata tccggtccaa ttccatcacc
     4081 gataataaat gggataattg gttcattagg tacgtttaat ccttcagttc cttgagtaat
     4141 tttttctgca gtcatagtta ttttacctcc aaattttaca tcttcatttt taatttgtat
     4201 cgattatttt ctttcttcaa gcggaatata cttacgattc gtttcgccaa tatattttgc
     4261 tctaggacgc ataattctat tatctttata ttgttctaaa atatgagcaa tccatcctgc
     4321 agaacgactt acagcaaaga ttggcgtgaa taaatcatga ggtatttcca tacagtgata
     4381 aacactcgca ctataaaaat caacattagg aattaatcct ttttcttctg ccatacgttt
     4441 ttccattttc actgacattt caaataattc ttcacgacca gcgtctttcg taatttgacg
     4501 gctcatttct cttaaatatt tcgctctagg atcaccatct ttatatacac gatgaccgaa
     4561 gcccattact ttatctttat tcgcaaattt ttcatctaag taagcatcaa cattttcaat
     4621 tgacccaatc tcagataaca tcgtcataac ttgttcgttt gcaccaccat gtaatggccc
     4681 tttcagagaa cctacagctg ctacaatacc tgagtacata tctgacaatg atgataccgc
     4741 acaacgtgct gtaaatgcag atgcgttcaa ctcatgatca gcgtgtaaaa taagtgcttt
     4801 attgaaggct tctacttcta tatctgttgg taattcccca cgtaacatat ataggaagtt
     4861 tgccgcataa cttaagtcag gattaggctt aagtggttct ttatcttgtc ttactcgagc
     4921 aaacgctgta actaatgatg ctactttagc ctgtatacgc attgctcttt cataacgatt
     4981 ttcatctgat tcattttctg catcaggatc gaaatgtgca atatatgata atgacgtacg
     5041 taatgctgtc attggatgca cgtgatctgt aacatactcc tcaaaatgtg tatacacacg
     5101 aggatttaat gtcatgtatt gatttaattt cccctttaaa tgagctagct cttcttcatt
     5161 tggcaatctg taattccata ataggaaaat gacttcttca aattgcgcgt tttcagctag
     5221 atcatcaata tcatagccgg catatgttaa ttgactttca ataattgaac ttatcttagt
     5281 ctccgctgcg ataacccctt ctaaacctct ttgtaattct gccatgataa atttcccctt
     5341 tactgtttct ttatgaaatg gctttcaact aatattatag ctaaacgtta ttcgtttgtg
     5401 aaatataaaa actggcatta tatgtgcaac aattattttg gaattctatg taaatgtcac
     5461 agaatagcca caaatagctc tattaaagct ttttcaagat tatattcatc accaactttt
     5521 agcatagaat aaaattttca attggttatt atatatgatt ataaaatcca aagtatatta
     5581 acatggaatt ttacacattt ttaccgaaaa taattgtata tatcctaata taagtgcata
     5641 ataaacatat ctatatttaa gggagatgta ttatggctga aaaattacaa agggaactga
     5701 gcaatcgcca cattcaatta attgctattg gtggcgcaat tggtacaggc ttattcttag
     5761 gcgctggtca aacgattgca ttaactggcc cttctatatt actaacatat atcattattg
     5821 gatttatgtt atttatgttt atgcgaggtt taggtgaaat catcattcaa aatactgaat
     5881 ttaaatcttt cgcagatgta accaatacat acattgggcc ttttgcagga ttcgtaaccg
     5941 gttggacata ctggttctgt tggattatta caggtatggc tgaagtaaca gctgtagcaa
     6001 agtatgtaag cttctggttc ccagaaattc caaactggat tagtgcactt ttttgcgtat
     6061 tgttattaat gtcttttaac ttattgagtg cgagactatt tggagagtta gaattttggt
     6121 tctctatcat taaaatagca acaatcattg gtttaattgt cgtaggtttc gttatgattc
     6181 tatttgcata taaaactcaa tttggacatg cgagtttcac aaacctatac gagcacggtg
     6241 tattccctaa aggagcatct ggattcttta tgtcattcca aatggcctta ttctcattcg
     6301 tgggaatcga aatgattggt gttacggcag gtgaaacgaa aaatcctgtt aaaacaatac
     6361 caaaagctat taatagtgtt cctattagaa ttttaatatt ttatgtcggt gctctagcgg
     6421 ttatcatgtc gattattcct tggcaacaag ttgatcctga taacagtcca ttcgtaaaat
     6481 tgttcgcatt aattggaatt ccatttgctg caggcttgat taattttgta gtactaactg
     6541 ctgctgcttc atcatgtaac agtggtattt tctcgaatag tcgtatgctg ttcggtttat
     6601 caagtcaaca acaagcacca ccgaatttct ctaagacgaa taagtatggc gttccacatg
     6661 tagcaatctt tgcttcatcg gcattgttac tcgtggcagc attattaaac tatattttcc
     6721 ctgatgctac taaggtattt acgtatgtga caacaatctc tacagtatta ttcttagttg
     6781 tttggggact gattatcatc gcttatatca attatagtcg taaaaatcca gaccttcata
     6841 aaaaggctac gtataaatta tttggcggaa aatatatggg ctatctcatt tttgtattct
     6901 ttatttttgt gtttggccta ttgtttatca atgttgaaac aagacgtgcg atatacttta
     6961 ttcccatttg gtttatacta ttaggattta tgtacttaag atataaacgt atcgctgcta
     7021 aatcaaataa ctaataacaa gttttacccc tgttgaatat attaaagttc aacaggggtt
     7081 tttatatgca acttatatat taaattgcga acttggctca atacttttac tttctcatct
     7141 atttaataat gtatcatttc agaaatacat ccatatttct attttataat aactttccaa
     7201 agtaaaatga gtgaaagttt aaagctgata atgtacatgt ataaaagata taaatattta
     7261 tatagattgc tattcataca ttatctttat caaataacct attaattgag tcataaaata
     7321 ccagataaac caaaaaaacg tctttccata gttgataaat ggaaagacgt ctttatttat
     7381 aaattatagt acgtttgcat atccttcaaa gattttacct tgagcagcat caatcgtaac
     7441 taacatgtta ttgcttatgt ttttaacagc tttttctaca cctacaactg ttggaatacc
     7501 tttttctaaa ccaacaattg cacttggtga tgtaatacca ttttcttctg taattaagcc
     7561 taaagctttt tctacataag gtacaaaagt ttcatcgatt gagttagtaa cgataacttt
     7621 gtcagataaa tctttacctt ctaaatcttt aacagtttca gcaactaacg tagttccaac
     7681 aactgatcca cgtccaatac cttgaccatt agcaatttcg tcaccaacta ggtggatttt
     7741 catcatatta gtagttccag tttcaccagt tggtacacca gcagtaataa tgattaaatc
     7801 accattagtt actctaccag tttcaacagc tgttgcaact gcattgttta acaatgcatc
     7861 tgtactctta cgtccttttt taactacagg ttgaacaccc caaacaattg aacattgacg
     7921 tgcagtttct tcacttggag tcactgcaat aatgtctgaa tgcggacgat atttagagat
     7981 agtacgtgcc gttgaaccac tttcagtagc agctacaatt gctttaacat ttaagtttaa
     8041 agctgtatgt gcaaccgaaa taccgattgc attcactaat gaagtttcaa ctaatttagt
     8101 acgatctgac aataactttt tgtaatcttg ggctgcttca gctgatacag caatatttct
     8161 cattgtttta acagcttctt caggatataa accagcagca gtttcaccag ataacattac
     8221 tgcatctgta ccatcataga ttgcgttggc aacgtcacta gcttctgcac gtgtagcacg
     8281 tgggttacgt tgcatagaat ctaacatttg tgtagctgta ataactggtt tacctaattt
     8341 gttacattgt ctgattaaat ttttttgaac cattggtact ttttcaggtg gaatttcaac
     8401 acccatgtca ccacgtgcaa ccattaaacc atcagacact tcaagaattt ccgcaatatt
     8461 atcaatacct tcttggtttt caattttagg gaatactgaa atgttagctt tttgttcttc
     8521 taaaatttca cgaatttcta aaacatcact aggacgacgt acgaaacttg ctgcaatgaa
     8581 gtcaacattt tctttaatac cgaaacggat atcttcagca tctttttctg taataccagg
     8641 taaacttact cttacaccag gtaagttaac accttttttg tttttaagct caccagagtt
     8701 taaaatatca catttaactt cttttttagc atggtcaata tctttaactt gtaattcaat
     8761 taagccatca tcaagtaaaa tgtatgaacc tacttgaaca tcgttaatta agttttcata
     8821 tgttactgag aacttttccg gtgttccttc aacttcattc atgctaacaa taacttcgtt
     8881 accacgttca agttcaatga taccgtcttt catattatgc gtacgaattt ctggaccttt
     8941 cgtatctaat aaaattgcta caattttgtc taatctttta gctactttac gaattgtatc
     9001 aattctacct ttatgctctt catgactacc atgtgaaaag tttaatcgtg caacgttcat
     9061 accagcattg attaatttct caatcatttc ttctgattct gaagctggtc caattgtaca
     9121 tacaatttta gtttttctca ttttataatt cctcctgaaa tcttatatag ataacttgtt
     9181 agcaagttca tatagactat aatcaaattt atgatcttta ccatcaaaaa tttcatcaaa
     9241 agatgttgct acaattttat tgttcttaat tccaacaccc ttagctgttt caccttgcat
     9301 taataagtct accgcatatc cacctaaacg tgatgctaaa actctatccg cacctgttgg
     9361 gctaccacca cgttgaacgt gacctaacac agacactcta ttatcaacat tgatgtattg
     9421 tgataattct ttttgacaat cttgcgcagt catgcaacct tctgctacaa gaacgattga
     9481 gtgtttctta ccacgtttaa taccttgttc aattttatca gctatttctt taatatctgt
     9541 tttcacttct ggtactacaa ttgtctcagc accaactgat aatccagccc ataatgctag
     9601 atctccacaa tcacggccca ttgcttcaat gataaatgtt cgtgcgtgac ttgacgcagt
     9661 atctctaatt ttgtcgacta agccaataat cgtatttaat gctgtgtcaa atccaattgt
     9721 aaaatcagta ccattgatat cattgtcaat cgtaccagga ataccgatag tttgaatttc
     9781 tttacattcc tcactgatgc gttgtgcacc gcgataacta ccgtcaccac caataactac
     9841 aaggccctca atccctcttt tacgtaagtt ttcgattgca actttacgta cttcttgctc
     9901 cttaaactct ggacatcttg ctgaatacaa gaatgtacct ccacgctgaa tcgtatcccc
     9961 aactgatcct aattcaagtt tatgaatatc atcatttaac aatccttggt aaccatgata
    10021 cacaccataa acttcaattt cattgtaaat tgctgtacga acaactgctc ttaccgcagc
    10081 attcattcca ggtgaatctc caccactagt taaaactgca attttcttca tgacgacata
    10141 cctttctata actgatttat ctttaactct aaattaccac aaattgatat gtcattccat
    10201 caaaactaat gtattgaatt gatgtaaacg ttttaaatat tgaattttat tttaacttaa
    10261 ttaaaaaaag attagtagcc acaattttga ctactaatct tagttaaaat tcagtatcta
    10321 aatattaaat tattgttcta atgtacttca atttatggta aaacccagta tcgatttaac
    10381 ataaaaatgc tcaagttgat tattctatat aagaaccgat atttctgaat ttttcaaacc
    10441 gatcattagc aatttcatca cgtgataatg actcaagtga atctaactgt tcaacaaacg
    10501 ctgatttaat agctaaagct tgctgttcaa tatctttatg tgcaccgcca agtggttcag
    10561 aaatgacatc atctataata cctaattgct taatatcatg ggcagtaatt ttcattgttt
    10621 cagctgcaat tttagccaaa ttactgtctt tccataataa tgccgctgca ccttcaggag
    10681 atataacaga gtaagtacta ttctctaaca tcaatacttt attggcaata ccaataccta
    10741 gagcacctcc actgccacct tcaccaatga caatcgcaat aactggtact tttagtgaag
    10801 ccatctcaat caaatttgtt gcgatagatt cactttgtcc acgttcttcc gcagctttac
    10861 caggatatgc accttttgta tctataaatg taaagatagg acgattgaac ttttcagctt
    10921 gtttcattaa acgtaatgct tttcgataac cttctggatg cgacatacca aaatttcgat
    10981 aaatattatc ttttgtatct tttccgcgtt gttgtccaat aaccgtaaca gcgcgaccat
    11041 ttaaaaagcc aatgccacca atcattgctg gatcatctct aaaattacga tcaccatgaa
    11101 gttccataaa cgaatcaaag atatatggaa tataatctag ggtcgtaggt ctttcttgca
    11161 aacgcgcaat ttgcacacga tcccatggtt ttagatttgt atatattttt ttagtttctc
    11221 gttccaatga cgcttcaagc atgtcaattt cttcttgtaa atccacatca tttttatctt
    11281 gagattcttt caaagattca attttatttc gaatttcaaa aagtggtttt tcaaaatcta
    11341 acattattta gtcacctctt gatggatttt tagaatttca gacaatgttt gacgcatatc
    11401 attacgatgt acaactttgt ccaattgtcc atgctctaat aaaaattctg cagtttggaa
    11461 atcatctggc aatttttcgt ttattgtctg ttcaataact cgacgacctg caaaacctat
    11521 caacgctttt ggctcactta aatttatatc accaactgat gcaaagcttg cagatacacc
    11581 accagtagtt ggatgtgtta aatatgatat atataatagt ccagcgtcag aatgacgttt
    11641 taaagataca ctggttttac ccatttgcat caaggaaata ataccttctt gcatacgtgc
    11701 accaccactt gcagagaaaa gaataaatgg taaacggttc tcagtgcagt aatcaatgat
    11761 gcgacatatc ttttcaccga taaccgatcc catacttccc attctaaaac gtgaatccat
    11821 gacagcaacg ccaaatttca taccatctag ttgcgctgta ccagtcacaa ctgcttcttt
    11881 aagacctgtc ttttgttggt ccttttcaat tttttctaaa taacttggaa aatctaatgg
    11941 attcgcagag gtcattccct tatcgaattc tgtaaatgat ccttcatcag aaattgcttc
    12001 tatacgttta tacgcagtta aagcaatatg atgatcacaa ttaaagcaca catttaaatt
    12061 ttcagctaat tcttttgtgt acataatttt cttacacttt ggacacttag tcataatacc
    12121 tgcaggcaca tcattatttt tagagtcttg tactgtaaga tatttctttt tctttgttcg
    12181 attaaaaaaa tctttaaaca taggaaaacc tccaaataac ctctgttcta accatttaga
    12241 gccttaaact gaacttgacc agttaaaaac gggtttaaat ttatttgatt tatattcgtt
    12301 tgactgttga atgtttatca taaactttca ttttcatcat tttaatgaat ctttattgct
    12361 aacttttaag caatttaatt aaacgttaat tatttttatt gtaaatctgt aagtttcatt
    12421 gttttatcat acacatcttg cggatcaact tcaatcctag ctactccaga ttccattgcc
    12481 gctttagcaa cattacgagc aactgatggc gctacacgtt tatcaaacgg tcctgggata
    12541 cagtagtctt catttaattc agaactatcg attaaatcag caatcgcttc tacagctgct
    12601 tttttcattt cttcatttat atgtgtagct tcaacctcta atgcacctct aaaaatacca
    12661 gggaaagcta atacattatt aatttggtta ggataatctg aacgtccagt accaacaacg
    12721 cgtgcacctg ccgctttggc atcatcaggt attatttcag gatttggatt agccattgca
    12781 aatataattg gattatctgc catactctta accatatctt gtgacagcgc attagctaca
    12841 gaaactccga taaatacatc tgcgtctttt acgacttctt ctaaagaccc ttcaatctta
    12901 tctttatttg tccatttagc tacaacatct ttcgtaggat tcataccata tgaacgtcct
    12961 tcaaaaattg cgcctcttga gtcacacata accatatttc ttacaccata cgcgtatagt
    13021 aatttaacaa tggctattcc tgctgcacca gcaccattta gtacaacttt tattttagca
    13081 atatctttgt taacaactct caatgcattt accaaacctg ccattgttac aattgctgta
    13141 ccatgttgat cgtcatggaa taccggaata ttagtttctt ttttcaatcg ttcttcaatt
    13201 tcaaaacaac gtggtgccga aatatcctct aaattaatac caccataatt aggttctaac
    13261 aacttaactg ttttaatgat ttcttcggta tcagttgtat ttaacgcaat aggcatccca
    13321 ttgataccag cgaagctttt gaataatact gctttacctt ccattacagg aatacttgct
    13381 tcaggtccaa tgttacctaa acctaatacc gctgttccat cagtaataac tgcaactgta
    13441 ttccctttga ttgtgtaatc atacactttt cttttatctt catatatatc tttacacggt
    13501 tcagcaacgc caggtgaata tgctaaactt aattcctctt tattagtaac ttttacattt
    13561 ggtttaactt ctaatttacc ttgattacgt ttgtgcattt ccaatgcttc atctcttaat
    13621 gacatgaaat cagcccctaa ttcaatattt atttttaaaa aaataacttg gataaaacgc
    13681 attacattat aaaagtaaaa atattgggta aatctgaatg agtaagaatt tatggtttta
    13741 attatgtaac accaat
//
LOCUS       DAKPJH010000068        13629 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.068, whole genome shotgun sequence.
ACCESSION   DAKPJH010000068 DAKPJH010000000
VERSION     DAKPJH010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13629
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.068"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            287..3739
                     /locus_tag="OY092_001737"
     CDS             287..3739
                     /locus_tag="OY092_001737"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HCX1076679.1"
                     /translation="MKQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHR
                     YKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEG
                     IKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMI
                     KATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDSPKHIEVQVIG
                     DEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGT
                     VEFLVSGDEFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADLFGEEINMPQQK
                     DITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYD
                     SLLVKLSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFI
                     EETPELFDIQPSLDRGTKTLEYIGNVTINGFPNVEKRPKPDYELASIPTVSSSKIASF
                     SGTKQLLDEVGPKGVSEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTAD
                     VFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNY
                     PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILN
                     PERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHL
                     HTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDI
                     EGMESLSHYWSTVRTYYSDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFD
                     EVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSVITDGYKLDFPESVVS
                     FFKGEIGQPVNGFNKDLQAVILKGQEALTARPGEYLEPVDFEKVRELLEEEQQGPVTE
                     QDIISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVEIEIDKGKRLIIKL
                     ETISEPDENGNRTIYYAMNGQARRIYIKDENVHTNANVKPKADKSNPSHIGAQMPGSV
                     TEVKVSVGESVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE
                     KATD"
     gene            complement(3879..4790)
                     /locus_tag="OY092_001738"
     CDS             complement(3879..4790)
                     /locus_tag="OY092_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HCX1076680.1"
                     /translation="MFGKKNLKWLGVVATLMMTFVQLGGALVTKTGSADGCGSSWPLC
                     HGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFL
                     LLQALIGAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKP
                     LRRLTWLMAIIIYCGVYTGALVRHADASLAYGGWPLPFHDLVPHSEQDWVQLTHRIMA
                     FIVFTIIMITYIHAVKNYPNNRTVHYGYTAAFILVILQVITGALSIMTNVNLIIALFH
                     ALFITYLFGMTTYFIMLMLRSVRSDKQ"
     gene            5229..6140
                     /locus_tag="OY092_001739"
     CDS             5229..6140
                     /locus_tag="OY092_001739"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HCX1076681.1"
                     /translation="MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVV
                     MTNHSFLSSIPQILLMLLGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQ
                     NLLLLSFGMMLVGEICLFLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPG
                     AVPPLIGWVAIEGQISLTAIALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKG
                     FKRTRVSMFIWLIILLPVPLLLINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWA
                     TQMFIYSLNYLVIFFVLAVIVSLLTLI"
     gene            6165..6626
                     /locus_tag="OY092_001740"
     CDS             6165..6626
                     /locus_tag="OY092_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HCX1076682.1"
                     /translation="MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAA
                     VFALTFFLIYASRTIFIGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAF
                     KDKYNVHRKFGPFASVIWFCTAITGVAVYLLLYVLYPGGETTSLIKATFGH"
     gene            6953..7990
                     /locus_tag="OY092_001741"
     CDS             6953..7990
                     /locus_tag="OY092_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499615.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HCX1076683.1"
                     /translation="MKKLIIRVVGVLFLIGFLIYLFYSPRLKFDVLENPNKGNKVNRS
                     EQVNKSNNHAENPKPKEGVGTWVGKNIKVLTSKFGQADRVYPFRDGYKNYVFKDKNSY
                     YIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
                     DEDLKTQTLIKYGDIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNK
                     RPVEQNPNQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTE
                     DALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVM
                     RDYYSLIFLEK"
     gene            8006..8440
                     /locus_tag="OY092_001742"
     CDS             8006..8440
                     /locus_tag="OY092_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HCX1076684.1"
                     /translation="MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHL
                     LYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHL
                     IDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCTTGGSCNCSL"
     gene            complement(8503..9429)
                     /locus_tag="OY092_001743"
     CDS             complement(8503..9429)
                     /locus_tag="OY092_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCX1076685.1"
                     /translation="MKKVNRNILNAVLVGAGFVSSLLMINKNKVITKKQTIPAFFKGN
                     APYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETDVRLTKDQQLIVFHDATVDRTTN
                     GSGKVSAHTLAELKKLDAAYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
                     KDAPESYEGSIAPQIMFDTIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQE
                     VTEAFLKYHLLGGRYYQPLAQTFQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSI
                     DLMNDLYQKGAHTIVTDRPDLAQQFKQTIPKK"
     gene            9668..9922
                     /locus_tag="OY092_001744"
     CDS             9668..9922
                     /locus_tag="OY092_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HCX1076686.1"
                     /translation="MNLIPRTSIVVYLKHMKHERQIRKYGHIVHSNRDRKFVIMYVNE
                     QDVDQIVHKLMQLKYVRHIDGSPYKYLKKTYEKEKHEIYN"
     gene            complement(9925..10314)
                     /locus_tag="OY092_001745"
     CDS             complement(9925..10314)
                     /locus_tag="OY092_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076687.1"
                     /translation="MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKK
                     SSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPP
                     QAFHDLSLYYNYLISVLRLQKWIPELQ"
     gene            10384..10926
                     /gene="rsmD"
                     /locus_tag="OY092_001746"
     CDS             10384..10926
                     /gene="rsmD"
                     /locus_tag="OY092_001746"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002470236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HCX1076688.1"
                     /translation="MRVIAGKHKSKALESMEGRNTRPTMDKVKEGIFNSLYDVSGIGL
                     DLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIKSNLANLDLEAQSEVYKNNADRAL
                     KALSKRDIQFDVIFLDPPYNKGLIDKALKLISEFNLLKENGIIVCEFSNHEEIDYQPF
                     NMIKRYHYGLTDTLLLEKGE"
     gene            10928..11410
                     /gene="coaD"
                     /locus_tag="OY092_001747"
     CDS             10928..11410
                     /gene="coaD"
                     /locus_tag="OY092_001747"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HCX1076689.1"
                     /translation="MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKE
                     GTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELR
                     LTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
                     "
     gene            complement(11472..12611)
                     /locus_tag="OY092_001748"
     CDS             complement(11472..12611)
                     /locus_tag="OY092_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HCX1076690.1"
                     /translation="MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMR
                     GEPAIYNKFTRAKMALSTADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSE
                     NNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALESPNNILGISY
                     LKAIAKHAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDI
                     QHLYVTPHITLNQIFPYLKYQIIAMTTESLKNIYTVTEGFENRLKSNIYEATDFHHFI
                     KLLKTKRYTYTHIQRLLMNVLLNIKPTDVTRNIHAVKVLAMNDRGRQYLKHLKTAFPE
                     RQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR"
     gene            12738..13295
                     /locus_tag="OY092_001749"
     CDS             12738..13295
                     /locus_tag="OY092_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HCX1076691.1"
                     /translation="MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQ
                     LTIKSTEVVADIHITGTYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDE
                     HYHIIKDGMVNLQDIVEDIVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQ
                     EQDDSESRQVDPRLQKLQQLYDKEQ"
     gene            13375..13548
                     /gene="rpmF"
                     /locus_tag="OY092_001750"
     CDS             13375..13548
                     /gene="rpmF"
                     /locus_tag="OY092_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HCX1076692.1"
                     /translation="MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCK
                     NCGSYNGEEVAAK"
BASE COUNT         4726 a         1940 c         2473 g         4490 t
ORIGIN      
        1 aagataaagt tatcgctatt gataataaat gttgatgttt tgcaatttta tttttaattt
       61 tttagagttg tagaaatcga aaatgtttca caacaaaaac gtgaactacc tgttgttgca
      121 tagtcatttt tgaaattatt atttttgaag cggaggtttt aattgtctca agaatgttaa
      181 attttgaaaa tttgaaacat aactatagca aaacagagcg ctttaagata aaattttatt
      241 atctaattag ttagaaaatt ctaatagttt gaggagtgta tcgctattga aacaaataaa
      301 aaagttactt gttgctaacc gtggagaaat tgcaattcgt atattcagag cggcagcaga
      361 attagacatc agcacagttg caatttattc gaatgaagac aaaagttcat tacatagata
      421 taaagcagat gaatcctatt tagttggaag tgatttaggt cctgctgaaa gttatttaaa
      481 tattgagcgt atcattgatg tagcaaaaca agcgaatgtg gatgcgattc atcctggcta
      541 tggattttta agtgaaaatg aacaatttgc gcgtcgttgt gcagaagaag gaattaaatt
      601 tattggtcct catttagaac atttagatat gtttggagat aaagttaaag ctcgtacaac
      661 ggctatcaag gcagatttac cagttattcc tggtacagac ggtccaatta aatcatatga
      721 attagcaaaa gaatttgcag aagaagctgg tttcccgcta atgattaaag ccacaagtgg
      781 tggcggcggt aaaggtatga gaatcgttcg tgaagaaagt gaattagaag atgctttcca
      841 tagagcaaaa tcagaagctg aaaaatcatt tggtaatagt gaagtttaca tagaaagata
      901 cattgatagt ccaaagcata ttgaagtaca agttataggt gacgaacatg gaaatatcgt
      961 acacttattt gaacgtgatt gttcagtaca acgtcgtcat caaaaagttg tagaagttgc
     1021 accatcagtt ggattatcac caacattacg tcaacgtatt tgtgatgctg caattcaatt
     1081 gatggaaaat attaaatatg tcaatgcagg tactgttgaa tttctagtat ctggtgacga
     1141 attcttcttt atagaagtta accctcgtgt acaagtagag catacaatta cagagatggt
     1201 aacaggaatt gatattgtta agacacaaat tttagttgca gcaggtgccg atttatttgg
     1261 tgaagaaatt aatatgccgc aacaaaaaga tattacaaca ttgggctatg ccatccaatg
     1321 tcgtattaca acagaagatc cgttaaatga tttcatgccg gatactggaa caatcattgc
     1381 ttatcgttca agcggtggct ttggtgtacg tcttgatgct ggagatggtt tccaaggtgc
     1441 tgagatatca ccttattatg attcattact cgtaaaatta tctacacacg cgatatcatt
     1501 taaacaagca gaagaaaaaa tggtacgttc attacgagaa atgcgtattc gtggtgttaa
     1561 aactaatatt ccattcttaa ttaatgtaat gaagaataaa aagttcacaa gtggtgatta
     1621 cacaactaaa tttattgaag aaacaccaga acttttcgac attcagccgt ctctagatag
     1681 aggtactaaa acattagaat atataggtaa tgtaacaatt aatggtttcc caaatgttga
     1741 gaaacgtccg aaaccagact atgaattagc atcaattcca actgtatctt caagtaaaat
     1801 cgcttcattt agtggtacga aacaattgct tgatgaagta ggtccaaaag gtgtatctga
     1861 atgggttaaa aagcaggatg atgtcttact aacagataca acttttagag atgcacacca
     1921 atcattatta gctacacgag ttagaactaa ggatatgatt aatatcgcat ccaaaacagc
     1981 ggacgtattt aaagatggtt tctcactaga aatgtggggc ggtgctacat ttgatgtggc
     2041 atataatttc ttgaaggaaa acccatggga acgacttgaa cgtctacgta aagctattcc
     2101 aaatgtatta ttccaaatgt tgttacgtgc ttcaaacgca gttggttata aaaactatcc
     2161 tgataatgtt attcataaat tcgtacaaga aagtgctaaa gcaggcatag atgtctttag
     2221 aattttcgat tcattaaact gggtagatca aatgaaagtt gccaatgaag cagtacaaga
     2281 agcgggcaaa atctctgaag gtactatttg ttatacaggt gacattttaa atcctgagcg
     2341 atcaaacatt tatactttag agtattatgt caaactagct aaagagttag aacgtgaagg
     2401 tttccatatt ttagcgatta aagatatggc aggcttatta aaacctaaag ccgcttacga
     2461 attgattggt gagttaaaat cagctgtaga tttaccaatt catcttcaca ctcatgatac
     2521 aagtggtaat ggtttattaa catacaaaca agcaatagat gctggtgtcg atatcattga
     2581 tactgctgtt gcttcaatga gtggtttaac aagtcagcca agcgccaatt cgttatatta
     2641 tgcattgaat ggcttcccac gccaccttag aactgatatt gaaggtatgg agtcacttag
     2701 tcattattgg tcaactgtac gtacttatta ttcagacttt gaaagtgata tcaaatcacc
     2761 gaatactgaa atttatcaac atgaaatgcc tggtggacag tattcgaatt taagccaaca
     2821 agctaaaagt ttaggtttag gcgaaagatt tgatgaagtt aaagatatgt atcgcagagt
     2881 gaatttctta tttggtgata tcgtaaaagt aacaccatcg tctaaagtag ttggtgatat
     2941 ggcactttat atggtacaaa atgatcttga tgaacaatcc gtgattacag atggctataa
     3001 attagatttc ccagaatcag tagtgtcgtt cttcaaaggc gaaataggac aacctgtaaa
     3061 tggttttaat aaagatttac aagcggttat tttaaaaggc caagaagcac taacagctcg
     3121 tccaggtgaa tatctagagc cggttgattt tgaaaaagtc cgtgagttgc ttgaagaaga
     3181 gcaacaaggt cctgttacgg agcaagatat tattagttat gtactatatc caaaagtata
     3241 tgaacaatat attcaaacta gaaatcaata cggaaactta tcgttacttg atacgcctac
     3301 attcttcttt ggaatgcgta atggtgaaac agtagaaatc gaaatcgata aaggtaaacg
     3361 attaattatt aaactagaaa cgattagtga accagatgaa aatggtaata gaacgattta
     3421 ctatgcgatg aatggtcaag cgagacgtat ttacattaaa gatgaaaatg tacatacaaa
     3481 tgcgaacgtt aaaccaaaag cagataagag taatccaagt catataggtg cgcaaatgcc
     3541 aggttcagta actgaagtca aggttagtgt aggtgaatct gtgaaagcta accagccgtt
     3601 gctaattact gaagctatga aaatggaaac aacaattcaa gcaccatttg acggtgtgat
     3661 taaacaagta actgtaaata atggtgacac aatagcgaca ggcgatttat taatcgaaat
     3721 tgaaaaagca actgactaaa atgattaaaa taaaacgaga ttacacaaca attgacgtgt
     3781 aatctcgttt ttacatgtct taggtttaat tttaaatatt gatataaaaa accgtaattt
     3841 taatgggcgt gccattaaaa ttacggtttg cttttttgtt attgcttgtc acttcttact
     3901 gatcgtaaca ttagcatgat aaagtatgtt gtcataccaa ataaataagt gataaataat
     3961 gcatggaaaa gtgcgattat caggttaaca tttgtcataa tagataatgc acctgtgata
     4021 acttgtaata taacaagtat aaatgcagct gtataaccat aatgaacagt acggttattt
     4081 ggataatttt taacagcgtg aatataagta atcataataa tcgtaaacac tataaaagcc
     4141 atgatacgat gcgtgagttg aacccaatct tgttctgaat gtggtacaag atcgtggaat
     4201 ggcaatggcc aaccaccata tgctaaactt gcatccgcat gtctcactag tgcaccagta
     4261 taaacaccac aataaatgat gattgccatt aaccatgtta aacgtcttaa tggctttttg
     4321 atatataatt cgtcagcttc atatttttga tctatagaga aaataatcaa tgttattaaa
     4381 aatacagatg agaaactgat taatgatata ccaaagtgca atgctaaaac gtaatcgttt
     4441 tgttgccaaa taacagcggc agctccgatt aatgcttgca ataataagaa tccaacacta
     4501 atgattgata aaggtttaat ttctttaata tagcctatat gtttccatgc agtgataact
     4561 aaccataaga ccattaataa agacaaagct gaaacggctc tatgacttaa ctcaataatc
     4621 gtatcaatag gaaagaattc tggaatcaac gcaccatgac atagtggcca agaagaacca
     4681 caaccatcag ctgatccggt tttggtaact aaggctccac caagttgtac aaatgtcatc
     4741 attaacgttg ctacgacacc taaccatttt aaattctttt tgccaaacaa tttatacacc
     4801 ccatcataaa aaaacgcatc actgagaatt agaattaata gccggatttg agatgatact
     4861 ataaattgac ctgattgtag gatatgaaaa gatgggatcc aacgcaggaa atatgattta
     4921 attttacaag tattgtatgt ggacgacata aaaagaactt aatcgtaatg attttttatt
     4981 gggataatta tgtaatccac gtttactcaa atttgaagct taaatattaa tctcttttag
     5041 atgcatgatt ctacttatta aaattttcta acatatacat tatagcaata aattaaatgt
     5101 tatttgtgtc acaaaattga cattttctct tgtcgttaat ttgtcacatt ttaattttat
     5161 taaacctagt ctttttatgc aatctaagat atcataatct tatatgaaca aatttaagga
     5221 gggggattat gagcaaagag catactttgt cacaaaatat tagcagagtt aacttcaaag
     5281 aattgcaaca gataattaaa atgggacttg ttcaaggtaa cttaattccg gcttttgcgg
     5341 gcgcatggct agcagttgta atgacaaatc attccttctt atcatcaata cctcaaattt
     5401 tattaatgct attaggatct actttaatta tgggtggcgc atgtgcgtta aataattatt
     5461 acgaccaaga tattgatcgt attatgccta gtaaacaaaa tagaccaact gtaaataata
     5521 gaattacaga tcaaaattta ttactattaa gttttggtat gatgttagtt ggagaaattt
     5581 gtttgttttt attgaatata ccatcaggcg tacttggtct tatggggatt gtaggttatg
     5641 tgtcttatta ctcaatatgg tctaaaagac atacaacatg gaacacagtg attgggagtt
     5701 ttcctggagc agtaccacca ctaattggat gggttgcaat tgaaggacaa attagtttaa
     5761 cagcgattgc gctgttttta gttgtatttt gttggcaacc aattcatttt tatgccttag
     5821 ctattaaacg taaagatgaa tatgcacttg caaatattcc aatgttacca tcagttaagg
     5881 gctttaaacg tacacgtgtc agtatgttta tctggttgat tattttattg ccagtacctt
     5941 tattactaat aaatttaggt gtcgtattcg tagtgttagc tacattatta aatttaggat
     6001 ggattgcatt aggtttaaca acatttaaga aaaattcaga tcaaacaaaa tgggcaacac
     6061 aaatgtttat atattcacta aattatttag tgatcttttt cgtgttagct gtgattgttt
     6121 cattacttac tttgatctag attaattaag ttaggatgaa aaatatgggc gttccaattt
     6181 taccaacgat tagtacgaca tgtattgtca ttagtgcaat tttaattgcc attggttgga
     6241 gacttatttg gaaaagggaa ataaataaac acaaaaatgt tatgttagct gcagctgttt
     6301 ttgctttaac ttttttctta atctatgcaa gtagaacgat ttttatcggt aatacagcat
     6361 ttggcggacc agcatcaatt aagaaatatt atacgatttt cttatttttc cacattaatt
     6421 tagcaacaat tggtggtatt ctaggtctag ttcaaattat tactgcattt aaagataaat
     6481 ataatgtaca ccgcaaattc gggccattcg cttcagttat atggttctgt actgcaatta
     6541 caggtgtagc agtttactta ttattatatg tattatatcc aggtggagaa acgacatcac
     6601 tgattaaagc aacatttggt cattaatatg cttatacaaa tgatactaat ctgataaggc
     6661 aatttgtttt atcaggtttt ttgatgaaga atagtcggac agttgatggt attcatttga
     6721 taccttaact gtccattttt ttatacatat tttaatctta ataatgaaat tcaacctgaa
     6781 aacataaaga taggttatga tatagagtgt agggaaaatc tttatgacgt taaaattatg
     6841 cctgaagatg attttgtttt atcgaaacga cacagttatg tcagtgttga aaatttgcta
     6901 attaatgtgt tgttttttac aatagtatta atacttttta ggtggttgat tgatgaaaaa
     6961 gttaattata agagtcgtcg gtgtattatt tttaattgga tttttaatat atctttttta
     7021 ttcaccgaga ttaaaatttg atgtattaga gaacccgaat aaaggtaata aagtaaatag
     7081 atctgaacag gtgaataaat caaataacca tgctgaaaat ccaaagccta aagaaggtgt
     7141 tggtacatgg gtaggtaaaa atattaaagt gcttacttct aaatttggac aagcagatcg
     7201 tgtctaccct tttagagatg gttacaaaaa ttatgtgttt aaagacaaaa acagttatta
     7261 cattgtttca actaaacgtg aagaaatcgt ttcagtgtat gctacaggtg agaaagtcaa
     7321 tgttagtccg ttaaaaatag gacaacattc tgcagaaatt tttaatcata caagtattaa
     7381 tccagaaccg tcctttaaag ttgatggtaa aaaatatgaa tttgaacttt cagatgaaga
     7441 tttaaaaaca caaacactga ttaaatatgg cgacatatat gcacaagtgt attctgatca
     7501 acaatcgaaa aaggtgctaa gtgtacgatt tttaacaaaa gaaatgttag cagatattga
     7561 accttatcaa ttaaattcta attctacgtc agaagagcat aataagcgtc cagttgagca
     7621 aaatccaaat caattaattt ctctttatga agtaacgaat gaaatgagaa aattaaaagg
     7681 attaaaacca ttgaaaatca atagcgattt agcacatatt gcatctaata acttatatga
     7741 agcgacctct aatggttctg atagtgttga atttacagag gacgcattaa gagggcaatt
     7801 agataaaaat cacgttactt ataaaacaac tgctcaaaat gttggttatg cgtttaatga
     7861 tgtaccaaca ttaatccata gttggatgaa ttcagatata catcgatctc gtctattaaa
     7921 ttcaaaatac gatgagatgg gtggagatgt aatgagagat tattattcac taattttctt
     7981 agaaaaataa caatgagggg tatttatgat taatgaagct tcactagcga tattagatga
     8041 tattgatgaa ctagctgata tgatagttgc atcagatatt tatgcatcat ttgagcaagc
     8101 taaacaggcg ctcgaaaaca atgacgaagc acatttactt tatcaatcat ttttaaaatc
     8161 aaaagagaaa tatgatgaag taatgcgatt cgggaaatat catcctgatt ataagaaagt
     8221 tatgttagag acaagacaac gcaaaagagc atatgagatg cttgacgttg tgatgcatta
     8281 taaagctagg gaaatggcac ttcaacattt aattgatgaa gttgttacga aaattgcgta
     8341 cgctgtttca gagcatgtca aaatagaaac aggtaatcca ttctttcaaa catcacatag
     8401 tggttgtacg acgggcggat cctgtaattg ttcattataa aaaacatcga gtcagaaaaa
     8461 gatggttatt gaaaccacta actagcatct gactcgatgt ttttattttt tcgggattgt
     8521 ttgtttgaat tgttgtgcta aatctggtcg atctgtcaca atcgtgtgtg cacctttttg
     8581 gtataaatca ttcatcagat ctatactatt tacgccataa tagcctggaa tgacattcat
     8641 atcatttaac catttgataa aacgagatga agtcaaatca atgcctttaa aatgagtagg
     8701 catttggaac gtttgtgcta atggttggta gtacctgcca cctaataaat gatattttaa
     8761 aaatgcctct gtaacttcct gttggctagc accaattgca acggatcctt gtgcaatttt
     8821 attaaaacgg acgatttgtt ctttataaaa acttgtcaca agaacgcggt caaatgcttg
     8881 attctctgca attgtatcaa acataatttg tggtgcgata gaaccttcat aggattcagg
     8941 agcatctttt aagtctacgt ttatatacat atcaggatat tgcttcagca actcatcgaa
     9001 ggttagtata gctgtgtgtg catgaccacg atatggtgtt agtccattga tatctttgaa
     9061 gtgataagct gcgtctaatt tctttaattc tgctaatgta tgggcactaa cttttccaga
     9121 gccattcgtc gttctatcaa cagttgcgtc atgaaaaacg ataagctgtt gatcttttgt
     9181 gagtctcaca tctgtttcaa agccatcaac gcctaattgt ttagcatagt caaatgcaag
     9241 ttgcgtttgc tctggtctta aagccatacc accgcgatgc gcaaatatat atggtgcatt
     9301 gcctttgaaa aaagcaggga tggtttgctt tttagtaatc actttatttt tatttatcat
     9361 taataaacta cttacaaatc cagcaccgac tagtaccgca tttaaaatgt ttctgtttac
     9421 ttttttcata aaaaattcct cctcgtttac ttttatagct taacaaattc atagttctga
     9481 ctacagcgaa atgtgtggtt aatcatatag tggtgttctt gagaattgaa ttaatataat
     9541 gatgtttaat ataatctaaa tacatttatc gagcaattac ataagacata attaaggtag
     9601 cttaatattt taaaattaat aaagacatga tatgattaat gctgaaaata aatggagtga
     9661 ggtttaaatg aatttaatcc caagaactag tattgtagtt tatttaaaac atatgaaaca
     9721 tgaacgacaa atccgaaaat atggacatat cgttcattca aatagagatc gtaaatttgt
     9781 aattatgtat gtgaatgagc aagatgttga tcaaattgta cataaactaa tgcaacttaa
     9841 atacgttaga cacattgatg gctcaccata taaatactta aagaaaactt acgaaaaaga
     9901 gaaacacgaa atatacaatt aatattattg aagttctggt atccattttt ggagccttaa
     9961 cacactaatt aaataattat aatataacga taaatcatga aatgcttgag ggggctgtac
    10021 atcgatacct aaaataggta tgtcgaattt ttcagcacaa tcattaatca tttgaaactt
    10081 tttatttgaa tctggatatg gatatttaat agcgtttatc atgatataaa atgcttggaa
    10141 atgattgcca gttgtaggat tcataatgat tgctacagat gactttttat tttcagcttg
    10201 tggtgaatga aaatagataa ttttatcaat acgttgatgg ttatattcaa tcatcgtcat
    10261 gaattcgaac aaatctgtta gaccttcacc tagtgtaata aatgtttgtt tcattggttt
    10321 atcattctcc tttttctcaa taaattatat taaataacta aatgaattgg aagtgtgaac
    10381 aacatgcgcg tcattgcagg taaacataaa agtaaagctt tagaaagtat ggaaggccgt
    10441 aatacgagac caactatgga taaagttaaa gaaggcatct ttaatagttt atatgatgtg
    10501 tcaggtatag gtttagattt atttgcagga agcggggcgc ttggaataga agcactctct
    10561 cgaggtatgg ataaggttat ctttgttgat cagaatttta aagctgtaaa agttattaaa
    10621 tcaaatcttg cgaatttgga tttagaggcg caatctgaag tttataaaaa taatgcagat
    10681 agagctttaa aagcattgtc aaaacgtgat attcaatttg atgtcatttt cttagatcca
    10741 ccttataata aaggtctcat tgataaagct ttaaaactaa tttcagagtt taatttattg
    10801 aaagaaaatg gtatcatcgt ttgtgaattt agcaatcatg aagaaataga ctatcaaccg
    10861 tttaatatga ttaaacgtta ccattatggg ttgacagaca cattgttatt agaaaaggga
    10921 gaatagcatg gaacatacaa tagcggtcat tccgggtagt tttgacccca ttacttatgg
    10981 tcatttagac attattgaga gaagtacaga tagatttgat gaaattcatg tctgtgttct
    11041 taaaaatagt aaaaaagaag gtacgtttag tttagaagag cgtatggatt taattgaaca
    11101 atctgttaaa catttaccta atgtcaaggt tcatcaattt agtggtttac tagtcgatta
    11161 ttgtgaacaa gtaggagcta aaacaatcat acgtggttta agagcagtca gtgattttga
    11221 atatgaatta cgcttaactt caatgaataa aaagttgaac aatgaaattg aaacgttata
    11281 tatgatgtct agtactaatt attcatttat aagttcaagt attgttaaag aagttgcagc
    11341 ttatcgagca gatatttctg aattcgttcc accttatgtt gaaaaggcat tgaagaagaa
    11401 atttaagtaa taaaaataac agtattttag gtttatcatg gtttacaatc ctaaaatact
    11461 gttttcattt gttaacgata ttgctgtatg acaggcgtgt tgaaatctgt ttgttgttgc
    11521 ccgcttattg cattgtatat gtgtgttgct ttgatttcat ttgtgaagta atgtgcattg
    11581 cttttgttaa tattggttat atattgtctt tctgggaacg ctgtttttaa atgctttaaa
    11641 tattgtctgc cacggtcgtt catcgctaat actttaactg cgtgaatgtt tctcgtaaca
    11701 tctgtaggtt taatgtttaa taatacattc attaacagtc tttggatatg cgtatatgta
    11761 taacgctttg tttttagtaa ttttataaaa tgatgaaaat cagttgcttc ataaatgtta
    11821 gatttcaaac gattttcaaa accttcagta acagtataaa tattttttaa tgactctgta
    11881 gtcatagcta tgatttgata tttcaaatat ggaaatattt gatttaatgt aatatgaggt
    11941 gttacgtaca ggtgttgaat atctttaggt accacatgat gccaatgatc atcttgacta
    12001 atgattgatg ttctaataga tgtaccactt gcaaactgat ggtgttgaat taatgaatca
    12061 tgatgttgag cattttctcg tttaatagaa attgcattga tgtttttagc atgtttagca
    12121 attgctttca gataactaat accaagtatg ttgttaggac tttctagtgc ttcatgatgc
    12181 tctaataatt cgctaatgat acgagggtag cttttacctt cttttacttt ttgtgaaaag
    12241 gattcggatt gttcaatttc attaatgctg tgagctaatt gctttaatgt tttgatatca
    12301 ttattttcac taccaaatgc aattgtatcg acactcatat aatctgcgac tttaactgct
    12361 agttcggcaa aatgatcgcc agatgataaa ctggcagttg ctggtagttc gataactaaa
    12421 tcagctgttg ataatgccat ttttgcacga gtaaacttat tatagattgc cggttcgcca
    12481 cgcatgacaa agttaccact cattattgca atagtaacgt cagcatttgt aagtttttta
    12541 gattgattaa tatgatattg atgcccatta tgaaagggat tatattctgt gattaagcca
    12601 acgcttttca tttgcaattc gtcctttcgg tattcattat taatattgta acagaacatg
    12661 atatgttaag aaaaaatctt gacaacttgt tcttagaaag ttaaaataaa ttttgtgctt
    12721 gttagaggtg aagccatatg aaatggtcaa ttacgcaatt aaggaaatat caaggtaagc
    12781 catttgaatt tgatcaaacg gtgagttttg acaatttaaa agaatcatta gatttaattg
    12841 atttatctcc aattacaatc caaggtcagt taaccattaa gtcaacagaa gtcgttgcgg
    12901 atattcacat tactggaacg tatacaatgc cttgtgcacg tactcttgta ccagttaaag
    12961 tcccactaga tgtaactact acagaagtat ttgatttaga agggtacaat cagtataacg
    13021 atgatcaaga tgatgtagat gaacactatc acattattaa agatggtatg gttaatcttc
    13081 aggatattgt cgaggatata gttattattg agaaaccaat gagagcttat tcagagcaaa
    13141 gtgaccaaat gttgacagta ggtaatggtt gggaagtaat cgatgaggat caattagatg
    13201 agcttgctaa acagcaagaa caagatgatt cagaatcacg acaagttgat ccaaggcttc
    13261 aaaaattaca acaattatat gataaagagc aataagtagt ttaattaatg atataatgtt
    13321 gttaattaaa ctaacattta gtatttttcg tttataatct aaggaggata tatcatggca
    13381 gtaccaaaaa gaagaacttc taaaactaga aaaaacaaac gtcgtacgca tttcaaaatt
    13441 tcagtaccag gtatgactga atgcccaaac tgtggcgaat acaaattatc acaccgtgta
    13501 tgtaaaaact gtggttctta caatggcgaa gaagtagcag ctaaataatt ttagttactc
    13561 aatataaaaa gtcccgctta aaatgattgt tttaagtggg actttttata ttgcgaaaaa
    13621 taattggcg
//
LOCUS       DAKPJH010000069        13285 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.069, whole genome shotgun sequence.
ACCESSION   DAKPJH010000069 DAKPJH010000000
VERSION     DAKPJH010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13285
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.069"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            77..424
                     /gene="sarR"
                     /locus_tag="OY092_001751"
     CDS             77..424
                     /gene="sarR"
                     /locus_tag="OY092_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarR"
                     /protein_id="HCX1076693.1"
                     /translation="MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRS
                     ESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANI
                     QKLISELEEYIKN"
     gene            complement(613..1449)
                     /locus_tag="OY092_001752"
     CDS             complement(613..1449)
                     /locus_tag="OY092_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HCX1076694.1"
                     /translation="MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQST
                     IPTFYIVNVGGGYLDGDRYRMNVNVEDNAKVTLTSQGATKIYKTPSNHVEQYQTFNLK
                     DNAYLEYVADPIIAYENAKFYQHNTFNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
                     INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYET
                     ISSYSNTFDCRVAISQLPTHGFAVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLR
                     KY"
     gene            complement(1449..2063)
                     /gene="ureG"
                     /locus_tag="OY092_001753"
     CDS             complement(1449..2063)
                     /gene="ureG"
                     /locus_tag="OY092_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HCX1076695.1"
                     /translation="MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTK
                     EDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIES
                     GGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASL
                     EQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS"
     gene            complement(2076..2765)
                     /locus_tag="OY092_001754"
     CDS             complement(2076..2765)
                     /locus_tag="OY092_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HCX1076696.1"
                     /translation="MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFI
                     AWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMG
                     TRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQN
                     VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMA
                     HENVNVRIFIS"
     gene            complement(2758..3210)
                     /gene="ureE"
                     /locus_tag="OY092_001755"
     CDS             complement(2758..3210)
                     /gene="ureE"
                     /locus_tag="OY092_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HCX1076697.1"
                     /translation="MIVEEIQGNIANLSNSEKQKHVEKVYLENSDLVKRIQRVVTDHG
                     TEIGIRLKQPIDLQYGDILYADDHNMIIVDVNSEDLLVIQPRTLQEMGDIAHQLGNRH
                     LPAQFTETEMLVQYDYLVEDLLKSLGIPYVREDRKVNKAFRHIGHSHD"
     gene            complement(3223..4937)
                     /gene="ureC"
                     /locus_tag="OY092_001756"
                     /pseudo
     CDS             complement(3223..4937)
                     /gene="ureC"
                     /locus_tag="OY092_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447295.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
     gene            complement(4934..5344)
                     /locus_tag="OY092_001757"
     CDS             complement(4934..5344)
                     /locus_tag="OY092_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HCX1076698.1"
                     /translation="MIPGEIITKSTEIEINNHHPETVIEVENTGDRPIQVGSHFHFYE
                     ANAALDFEREMAYGKHLDIPAGAAVRFEPGDKKEVQLVEYAGKRKIFGFRGMVNGPID
                     ESRVYRPTDENDEYAGVFGDNGAENVNKKGGKRS"
     gene            complement(5358..5660)
                     /locus_tag="OY092_001758"
     CDS             complement(5358..5660)
                     /locus_tag="OY092_001758"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HCX1076699.1"
                     /translation="MHFTQREQDKLMIVVAAEVARRRKARGLKLNHPEALALISDELL
                     EGARDGKTVAELMSYGRQILNKEDVMDGVEHMITDIEIEATFPDGTKLITVHHPIV"
     gene            5920..6825
                     /gene="yut"
                     /locus_tag="OY092_001759"
     CDS             5920..6825
                     /gene="yut"
                     /locus_tag="OY092_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016266007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HCX1076700.1"
                     /translation="MKMIDVLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVG
                     SIIAYTFARFINYSEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPV
                     AAAVREVLRPYKVPMLTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDR
                     IHFIQSLFEGFSQVFIEASVIGGVCILIGILIASRKAALLAVIASLLSFIIVALLGGN
                     YDDINQGLFGYNFVLMAIALGFTFKTEINPYISTFLGVLLTVVVQLGTTTLLEPFGLP
                     ALTLPFIIVTWILLFAGIKHDKVDA"
     gene            7042..8196
                     /locus_tag="OY092_001760"
     CDS             7042..8196
                     /locus_tag="OY092_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HCX1076701.1"
                     /translation="MNDMDNSFLITTEIQRKWIEKFKVIGDTFKAKAEYNDQHSQFPY
                     KNIEWLIKEGYGKLTLPKEYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQI
                     YEQKLWSQDMLEQFAVEINNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGV
                     KTYTSMSKALTHIIVAAYIEELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLIL
                     NDVKVPLKHLVETEKSKAPNGWILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIA
                     TLPTVQQNLGKMETLLLCARQFLWSTAKGYQQYTDESQIRNATSASKVMVMNQGLEVI
                     DLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF"
     gene            8409..9317
                     /locus_tag="OY092_001761"
     CDS             8409..9317
                     /locus_tag="OY092_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCX1076702.1"
                     /translation="MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIP
                     KDPKRIAVVAPTYAGGLKKLGANIVAVNQQVDQSKVLKDKFKGVTKIGDGDVEKVAKE
                     KPDLIIVYSTDKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWE
                     ETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQK
                     LTAKAGWAEVKQEEIEKYAGDYIVSTSEGKPTPGYESTNMWKNLKATKEGHIVKVDAG
                     TYWYNDPYTLDFMRKDLKEKLIKAAK"
     gene            9715..10656
                     /locus_tag="OY092_001762"
     CDS             9715..10656
                     /locus_tag="OY092_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HCX1076703.1"
                     /translation="MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEP
                     SLSASVKIINRFSNEDIQVSPSYEREKNPFPKEWRMHAFFMDALPILNEPVKHVASNV
                     SDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPK
                     GNVEEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANER
                     QYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGP
                     SQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN"
     gene            10777..11346
                     /locus_tag="OY092_001763"
     CDS             10777..11346
                     /locus_tag="OY092_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000208738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HCX1076704.1"
                     /translation="MTTKQLVYTALMTAIIAILGLVPVIPLPFSSVPIVLQNIGIFLA
                     GVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGVFAGPSAGFLLLYPVVAFMIGAI
                     RDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILK
                     AIVASLIGTALLNHSQFRQIMGLKKSYLR"
     gene            11403..12173
                     /locus_tag="OY092_001764"
     CDS             11403..12173
                     /locus_tag="OY092_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1076705.1"
                     /translation="MASISMSDIYCNGTIFENDDEQLIYLTPSFPQRYTSNTWIYKKM
                     PTEERWLKDLERQHQLHTNQGSNHYAFSFPENEQLDNHWMAMFKDMNFELGIMELYAI
                     ESDALANLPRNADVEIAIVDESHIDAYLKVAYQFSLPFGKDYADAHEKMVREHYQKDV
                     IKRLVAYLNNEPIGVVDVIESENYIELDGFGVLEQFRHQGIGSTMQSLVGEYAISRDH
                     KPVILVADGEDTAKDMYAKQGYVYQSFCYQILKEDIGN"
     gene            complement(12350..13147)
                     /gene="fdhD"
                     /locus_tag="OY092_001765"
     CDS             complement(12350..13147)
                     /gene="fdhD"
                     /locus_tag="OY092_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HCX1076706.1"
                     /translation="MNKDVSLGQPIVRYEDGKLFNKTDQYVTEFPLTIMVNGEEFATV
                     ICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRM
                     IASCCGKSREFYFQNDAAIAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAA
                     ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGV
                     GVILSKSAPTTLAVTLANDLNITSVGFIRNGGFNIYSHPERIIDSEQ"
BASE COUNT         4480 a         2034 c         2342 g         4429 t
ORIGIN      
        1 tggatagagt ttcgatttaa taaattacat gtgaaccttg ctacaacaag atgtgcatca
       61 gaggagtggt ttaataatga gtaaaattaa tgacattaat gatttagtca acgcaacatt
      121 tcaagttaag aagtttttca gagatacaaa aaagaagttc aatttgaact atgaagaaat
      181 ttatatttta aatcatattt taagaagtga gtctaacgaa atctcatcta aagagattgc
      241 taagtgctca gagttcaaac cttactattt aactaaagct ttacaaaagc taaaagattt
      301 aaaattgtta tcaaagaaaa gaagtttaca agacgaaaga acagttattg tttatgttac
      361 agatacacaa aaagcaaata ttcaaaaact gatttcagaa ttagaagaat acattaaaaa
      421 ttaaatcaag gttaattgcg tttaataaca ttgaacgata acaatttatt aaaacgaagt
      481 tatttattca gcattgggac ataaaattaa cttaaaattt aaatattgaa gatgctttaa
      541 ttaaagttaa agactagcca taccttattt cagcttatta agcttgaaac aaggtacact
      601 agtcttttta ttttaatatt ttcttagaaa atcaagttta cgatcataaa tattttctgc
      661 gatatagctt tggatggttc caagtatttt ctctataatt tgtgtgcgat aagcaaaaat
      721 tctaactgca aaaccatgtg taggcaattg agaaatagca acacgacaat cgaatgtatt
      781 gctataagaa ctaatggttt cataaactga atcgattagt ttttggttaa catcttcatg
      841 tatgaagtaa gcagagccat aatgagagta atgttccata taacctattt cattgatcga
      901 ttgtttatta ggattcaata ataaattatc atatgtgact aactcatctt caatataaat
      961 ttcatttatt aaatgcatat attgatactt gaaggcttcg ccagtttttg aataaccagg
     1021 agttaaaata tcagtataaa ataatgaact agaattattg agattgaacg tattgtgttg
     1081 ataaaattta gcattttcat atgcgatgat tggatcagcg acatattcta aatatgcgtt
     1141 atctttcaaa ttaaaagttt gatactgctc aacatgattg gaaggtgtct tgtatatttt
     1201 tgttgcacct tgagatgtca atgtcacttt agcgttatct tcgacattca cattcatacg
     1261 gtaacgatct ccatctaaat agccaccacc tacatttact atataaaatg taggaatggt
     1321 agattgattt agataaactg gacgtatcac tttaagtgct ttttcaaaga aaatatctct
     1381 tgatactgat cgattgccat cgaaaaacac tgttaaatca agttgcccag tccattgttg
     1441 ttcatccatt atgataatcc tttgagtaaa gtgtcgcgtt caatccaatc gataacttca
     1501 tccaaacctt cgtcagtttt taagttagta aaagtaaatg gacgtttacc acgaaatact
     1561 ttagtatctt cagccatttg ttctaatgat gcacctacat agggagctaa atcagttttg
     1621 ttaattacaa agaaatctga cttaatcata ccttgaccac ctttacgtgg aatcttttca
     1681 ccttgagcaa catcgataat ataaattgaa aagtcaacaa gttctggact aaatgttgct
     1741 gctaagttat cgccaccaga ttctatgaaa attagttcta tatcgtcatg acgttctaat
     1801 aattcgtcta ttgctgcaaa gttcatagat gcatcttcac gaatcgcagt atgaggacat
     1861 ccaccagttt caacaccaat gatacgactt tcaggtagaa ctcctgaatt tactaatatc
     1921 ttttcgtctt cttttgtata tatatcattt gtaataacgc cgatactcat ttcttttgaa
     1981 agacgtttta caactttttc aattaattgt gttttacctg cacctacagg accaccaata
     2041 ccaattttaa tcgggtttgc cacaattata acctcctatg atatgaaaat tctaacattg
     2101 acgttctcat gcgccatttg atttagttct aaaccaggcg ctgtcatgcc aaaatctgct
     2161 tcttttaatt cgaaaatctg ctttcttgtt tcttctatat aaggaatcat gtgagtaact
     2221 atcttttgac cagcagtttg tccaagtgga atagcacgaa cagcattttg agttaaactt
     2281 gaaacatttt gatataaata gtaatcaata atcgtttcaa tatctacacc taaataatgg
     2341 cctagcatag taaaacaaat agctggattt aactttgctt tcttatcttg catttgttga
     2401 tgataccaag caatccatgg gctattataa agttctaaag ccaatttaac catgcgagtc
     2461 cccatttgtt ttgcaccaac acgtgtttct ttaggtaagt tttgaacaaa catcagctta
     2521 tctatgtgta atactttttg tgtatcatca ttttccaatg catcataaac taaacgcatg
     2581 gctaaaccat cagaataggt aagttgctct tgtaaaaaca tttttaacca agcaataaaa
     2641 gtatgatcat catgaattat atttcgttga atatatgttt caagaccaaa tgaatgactg
     2701 aaagcacctg ttggaaactg tgaatcacag aactgaaata atcttaagtg tgtatgatca
     2761 atcatgagaa tggcctatat gtctgaaagc cttattaact ttacggtctt ctcgaacata
     2821 tgggatgcct aaacttttta ataaatcttc aactaaataa tcatattgta ctagcatttc
     2881 agtctctgta aattgtgctg gcaaatgacg atttcctaat tgatgggcta tatctcccat
     2941 ttcttgcaat gttcttggtt gaatcactaa aagatcttct gaattaacat ccacaataat
     3001 catattatgg tcatctgcgt ataaaatatc tccatattgt aagtcaatag gttgttttaa
     3061 acgaatgcct atttcagtgc catggtctgt aacgactctt tgaatacgtt taacgagatc
     3121 tgaattttca aggtatactt tttcgacgtg cttttgtttt tctgaatttg acaaattggc
     3181 aatattgcct tggatttctt caacaatcat tctatgttcc tcctagaata agaagtatct
     3241 ttgagttaat ggtaactcag ttgctgcatt acttgtaatt ttttctccat ctacatatac
     3301 ttcatatgtt tgtggatcaa cgtctaattt aggtgttgcg ctgttatttt tcatatctgc
     3361 tttagataat tgtctaatat ttttaactgg acgcaccatg cgttttaaat ttaatgcacg
     3421 attgatacca ttttcataag cagttttaga cacgaatgtc attgacgtac ttgtaaggtt
     3481 tccgccgtat tgaccataca ttttacggta cttcattggt tcagatgtag ggatagaacc
     3541 atttgcatcg ccatttacgg cagagttaat taatccgccc tttacaacta attcaggttt
     3601 aacaccaaag aaaatgggat cccataagac aatgtcagct agtttgcccg gctcgataga
     3661 tcctacatat tcagaaatac catgtgtaat tgctgggtta attgtatatt tagcgatata
     3721 acgtttgatg cgattattat cattatgttc aaaatcacca tctaaaggac cacgttgttc
     3781 tttcatgcga tgtgctactt gccatgttcg tgtaattact tcacctacac ggcccattgc
     3841 ctgtgaatcg gaactaatca tactgaatac acccatatct tgcaggacat cttctgctgc
     3901 aatcgtttct ttacgaatac gtgaatctgc gaatgcgata tcttcaggaa tagccgcatt
     3961 taaatggtga gtaatcatta ccatatctaa atgttcatct acagtattat gtgtatatgg
     4021 caatgttgga tttgtagatg aaggtaaaat atttgaaaat gcagcggatt taattaaatc
     4081 aggcgcatga ccgccaccag caccttcagt atggtacata tgaagtacac ggtctttaac
     4141 agcagccatt gtgtcttcca taaatcctgc ttcatttaaa gtatctgcat gtaatgcaat
     4201 ttgaatatca aattcatcag caacatctaa tgcatgactc aaagcagatg gtgttgcacc
     4261 ccagtcttca tgtactttta atccaattgc tccggcattg atttgttcaa tgagtgcagt
     4321 tggatttgtt gcttgtcctt tacctgtaaa accgacatta atcggtaaac cttcggcagc
     4381 ttctaacatt ctatgaatat gccatggacc tggagttaca gttgttgctt tagaaccttc
     4441 tgaagcacca gtaccaccac caatatgagt cgtaatacca ctttctaatg cgacctctgc
     4501 ttgttcagga ttaataaaat gaacatgagt atcaatacca ccagcagtga cgattttacc
     4561 ttcagcggca atgatatctg ttgttgatcc tataataatg tcgacattat ccattatatc
     4621 cgggttgccg gcatttccaa tggcgaaaat ataaccattt ttaataccta tatcggcttt
     4681 aaccacttta tcgtaatcga taataacggc attagaaata acaaggtctg caacgttcac
     4741 gtcatcacgt gttacacgag gattttgcgc cataccgtct ctaatagatt ttccaccgcc
     4801 aaaggtagct tcttcaccat aaactgcata gtctttttct atttgagcaa ataggttcgt
     4861 atcacctaac gaatagaatc tccaacagta ggaccgtata agctcgtata ttgattttgc
     4921 gtcattttaa agctcatgat ctttttcctc cttttttatt cacgttttca gcaccgttat
     4981 ctccgaatac acctgcatat tcatcatttt catcagtcgg gcgatagaca cgtgactcat
     5041 cgataggacc attgaccata ccacgaaaac caaaaatttt acgtttgcca gcatattcaa
     5101 ctaattgaac ttctttttta tccccaggtt caaatcgaac agctgctcca gctggaatat
     5161 ctaaatgttt tccatatgcc atttcacgtt cgaaatctaa tgctgcattt gcttcataaa
     5221 aatgaaaatg tgagcccact tgaattggtc gatctcctgt attttcaact tcgataactg
     5281 tttcaggatg atggttatta atttcaatct ctgtactttt tgtaataatt tctcctggta
     5341 tcatttgact gcctccttta aacaataggg tgatgtactg tgattaactt agtaccatcg
     5401 gggaacgtag cctcgatttc gatatctgta atcatgtgtt cgacaccatc catgacatct
     5461 tctttgttta gaatttgtct accataactc attaactctg caacggtctt accatcgcgt
     5521 gcaccttcta ataattcatc gctgattaaa gctaatgcct caggatgatt tagtttcaaa
     5581 ccacgtgctt tacgacgacg tgcaacttcc gctgccacta caatcattaa tttgtcttgc
     5641 tctcgttgtg taaaatgcaa attaaaaccc ccaatttcat attagataca atttacaaaa
     5701 tttatattaa tcctaattgt tgtgataaat aagtaatata caaagtttaa tgcgtaacag
     5761 taaaaaatta atttactatt tcgtatttaa aaatatatga ttacaattac aacaaatagc
     5821 aaaagatatt taggatttag aaaatagagt ttttaatata actttttgta aaatggtagt
     5881 atattaatga gtaaacattc aagaaaaagg gtgggcattt tgaaaatgat agatgtactt
     5941 ttgaaaaata tttctcaggt tgtgttaatt agtaataaat ggacaggatt atttatctta
     6001 ataggattat ttgttgctga ttggacaatt ggattagcgg ctattgtagg tagcatcatc
     6061 gcctatactt ttgcgcgttt tataaattat agtgaagcag agattaatga tgggttagcc
     6121 ggatttaatc cagtgttaac tgccattgcg ttaacaatct ttttagataa gtcaggatta
     6181 gatattgtta taacaatgat agcaacttta ttaacgttac cagtcgctgc tgcagtgaga
     6241 gaagttttaa gaccatataa agttccgatg ctgacgatgc cttttgtcat tgtgacttgg
     6301 tttacaattt tactatcagg acaggttaaa tttgtagata catctttaaa gttaatgcct
     6361 caaaacattg aaacggttaa ttttagcaac aatgatagaa tacatttcat tcagtcatta
     6421 tttgaaggat tcagtcaagt atttatcgaa gcgagtgtaa ttggtggcgt atgtatttta
     6481 atcggcatat tgatagcatc aagaaaagca gcactcttag ctgttatagc tagtttgtta
     6541 agctttatca ttgtagctct attaggtggt aattatgatg atattaatca ggggttattc
     6601 ggttataact ttgtattaat ggcaatcgca ctaggattta catttaaaac agagattaat
     6661 ccttatattt cgactttttt aggtgtgtta ttaacagtag tggtgcaact aggtacaaca
     6721 acattgcttg aaccgtttgg cttacctgca ttaacattgc catttattat tgtgacttgg
     6781 attttattat ttgctggtat taaacatgac aaagtagatg cttgaaagtt aaatcaaacc
     6841 tagtattgtt tgaatatcac cttaaaccat acagcgagtt gtatagttta aggtgtattt
     6901 ttatggagaa aattaattgg atacttaatc gaattatcaa ctttctttta attgttcaca
     6961 gcacgttcct ttttattttt aaagtcgagt gttaaactag gaataaataa tttatattgt
     7021 gtgttgtgtg gggtgactaa tatgaatgat atggataatt cctttttaat aacaacggaa
     7081 attcaaagaa aatggattga aaaattcaaa gtaattggag atacatttaa ggctaaagct
     7141 gaatataatg atcaacatag ccaatttcca tataaaaata ttgaatggtt aattaaagaa
     7201 ggttatggaa aattaacgtt accaaaagaa tatggtggtg aaggtgcgac catagaagac
     7261 atggttattt tgcaatcatt tttaggcgaa cttgatggtg ccacagcatt atctattggt
     7321 tggcatgtga gtgtcgtagg acaaatttat gaacagaaat tatggtctca agatatgttg
     7381 gagcaatttg ctgttgaaat taataatggt gcattagtta atagagcagt tagtgaagct
     7441 gaaatgggta gtccaacaag agggggaaga ccaagtacac atgctgttaa agctgatgac
     7501 gggtatattt taaatggtgt gaagacatat acatcaatga gtaaagcact aacacatatt
     7561 attgttgctg cttatataga agaattagaa agtgttggtt ttttcttagt ggacaggaat
     7621 ttgcctggtg ttgaaattgc cgataattgg gacgtattag gtatgcgagc gacagaaagt
     7681 catgatttaa tattaaatga tgtaaaagta ccattaaaac atttagtgga aacagagaaa
     7741 agtaaagcgc caaatggttg gatattgcat ataccaagct gttatttagg tatagcacaa
     7801 gctgctagaa attatgctgt agactttgca atccaacata gccctaatag tattgaagga
     7861 acgattgcaa cattgccaac tgtgcaacaa aatttaggga aaatggaaac gctgttgtta
     7921 tgtgcgagac aatttttatg gagtacagca aaaggctatc aacaatatac agacgaaagt
     7981 cagattagaa atgcgacgag tgcgagtaaa gtaatggtaa tgaaccaagg ccttgaagtg
     8041 attgatttag cgatgcgcat tgttggtgct aaaagcttag aaatgaatcg accattacaa
     8101 cgttactatc gtgacatgcg tgcaggatta cacaatccac ctatggaaga tgcagcatat
     8161 acaaatattg ctaagagtat tacagataca ttttaaattt aaaaaggtaa atcaatcgtt
     8221 gaatggcata aagagatgaa atttgacgtt cggatttacc ttttttgtgg gaatttatag
     8281 gtatattaag atattttgct aaattttttg cgaaaataaa aaaataaata acactagcta
     8341 ttgtaaatgt atatgcaatc ttgtataatt ttggaatgat tgataatcat tttcaatagg
     8401 aggaaattat gaaaaaacta ttattaccat taataattat gttattagtg ttagctgcgt
     8461 gtgggaacca aggagaaaaa aataacaaag ctgaaactaa atcttataaa atggacgatg
     8521 gcaaaacggt agatattccg aaagacccta aacgcattgc agtagttgcg ccaacatatg
     8581 ctggtggact taaaaaatta ggtgcaaaca ttgtagctgt aaatcaacaa gtcgatcaaa
     8641 gcaaagtatt aaaagataaa tttaaaggtg ttacaaaaat tggtgatggc gatgtagaaa
     8701 aagttgctaa agaaaagcca gatttaatta ttgtatactc tactgacaaa gacattaaaa
     8761 aatatcaaaa agtagcacca acagtagttg ttgactataa taagcataaa tatttagaac
     8821 aacaagaaat gttagggaaa attgttggta aagaagataa agtaaaagct tggaagaaag
     8881 attgggaaga aacaactgct aaagacggta aagaaattaa aaaagcaatt ggacaagatg
     8941 caacagtgtc attgtttgat gaatttgata aaaaattata cacttacggc gataactggg
     9001 gtcgtggtgg agaagtatta tatcaagcat ttggtttaaa aatgcaacca gaacaacaaa
     9061 agttaactgc aaaagcaggt tgggctgaag tgaaacaaga agaaattgaa aaatatgctg
     9121 gtgattacat tgtgagtaca agtgaaggta aacctacacc aggatatgaa tcaacaaaca
     9181 tgtggaagaa tttgaaagct actaaagaag gacatattgt taaagttgat gctggtacat
     9241 actggtacaa cgatccttat acattagatt tcatgcgtaa agatttaaaa gaaaaattaa
     9301 ttaaagctgc aaaataattc aactatataa gttagtgaaa tgagagtctg aaacatatca
     9361 atcttttgat attgtattag gctcttgttt ttatagctag aaagttagat atttgtattt
     9421 tttaaaataa taagtgccgt tgttatcatt caatttaatt aatgatagat tagtattatt
     9481 acagctaaag tagtatacct gagaaatagc tcaatgtatc tcttcattaa taagttatat
     9541 cataattatt ttagtgcata ctttatggaa ggcatatcag ggaatgatta tcaattaaag
     9601 aagaggttta aaaggattac aacagaatgt tatgattttg tagaaagata tataacaacg
     9661 ttttataaaa acataatatt gttaatggaa aatgaaatgt aagggggatt tcgagtgact
     9721 aagaaagttt attttaacca tgatggtggt gtagatgatt tagtatctct atttttatta
     9781 ttacaaatgg aaaacgttca attgataggg gtcagtacaa ttggtgctga ttgttattta
     9841 gagccatctt tgagcgcatc agtaaaaatt attaaccgtt tttcaaatga agatattcaa
     9901 gtttccccat catatgaacg agagaaaaat ccatttccta aagaatggcg tatgcatgcc
     9961 ttttttatgg acgcattgcc aattttaaat gagccagtca aacacgttgc ttcaaatgtg
    10021 agcgacaaag aagcctttga agacattatt caaactttaa agagacaatc agaaaaagta
    10081 acattattat ttacaggccc gcttacagat ttagcaaaag cactacaaaa agattcatct
    10141 atcgttcagt atatagaaaa attagtttgg atgggtggta cctttttacc aaaaggaaat
    10201 gttgaagaac ctgagcatga tggttctgca gaatggaatg catattggga tccagaagcg
    10261 gttaaaattg tttttgatag cgatatagag attgatatgg ttgctttaga aagtacgaat
    10321 caagtgccgc taacgttaga tgttagacaa agatgggcga atgaacgcca atatacgggc
    10381 attgattttt taggagtaag ttatgcagcg gtaccaccat taacacactt tataacaaat
    10441 tctacttact ttttatggga tgttttaacg actgcttata ttggtaacaa ggacttagtt
    10501 cattcaattg agaaaaaagt ggatgtaata agttatggac caagtcaagg taagacattt
    10561 gagtgtaaag atgggcgcaa aattaatgtc ataaatcatg tagataacaa cgcatttttt
    10621 gattatataa ctgcacttgc taaaaaagta aattaacagc tgtgtagaat aattaagatt
    10681 ttaatttata tagaacagct tattgtaaac ttttcgtttc ttaaagttta caatggtgct
    10741 ataataatgg tcatgaaata cgaaaggaag taaaaaatga caacaaaaca gttagtatat
    10801 acagctttaa tgacagcgat tatcgctatt ttaggattgg taccagtaat tccactacca
    10861 ttttcttcag taccaattgt acttcaaaac attggtattt tcttagcagg tgtgatttta
    10921 ggacgtaaat atggcacatt aagtgttatc gtctttttat tattagtagt tgctggcttg
    10981 ccacttttat caggcggtcg cggtggcatt ggtgtattcg caggtccttc agcaggattt
    11041 ttactattat atccagttgt agcattcatg attggtgcga ttcgtgatag attcatcaat
    11101 gaaattaatt tctggatttt attcgtgggt attttagttt ttggtgttat agcattagat
    11161 gttattggta cattgattat gggcatgatt attaacatac catttacgaa agctatttca
    11221 atttcattag cttatttgcc tggtgatata ttaaaagcaa ttgtagcaag tttgattggt
    11281 acagctttac ttaatcactc gcagtttcgt caaattatgg gattaaaaaa atcatattta
    11341 agatagtaaa gtaattgaat aagttgcttt gaaatttata aaagtgaaag gagtaggtgt
    11401 caatggctag tataagtatg tcagatatat attgtaacgg cactatattt gaaaatgacg
    11461 atgagcagtt gatttattta acaccttctt ttccacaacg atatacaagc aacacatgga
    11521 tatataaaaa gatgcctacc gaagagcgat ggctgaaaga cttagaacgt caacatcaat
    11581 tacatacaaa tcaaggttca aatcattatg cgtttagttt cccagaaaat gaacaacttg
    11641 ataatcattg gatggctatg tttaaagata tgaattttga actaggtatt atggaattgt
    11701 atgccataga aagtgatgcc cttgccaatt tgccgcgtaa cgctgacgtt gaaattgcca
    11761 tcgttgacga gtcgcatata gatgcctatt taaaagttgc atatcaattt agtttgccat
    11821 ttggaaaaga ctatgcagat gcacatgaaa aaatggtaag ggaacattat caaaaagatg
    11881 tgattaaacg cttagtagct tatttaaaca atgaacctat tggcgttgta gatgtcattg
    11941 aaagtgaaaa ttacattgaa ttagatggat ttggtgtatt agaacaattt cgacaccaag
    12001 gaatcggttc taccatgcag tcattagtag gtgaatatgc tatatctaga gatcataaac
    12061 cggttatatt ggtggcagat ggtgaagata cagcaaaaga tatgtatgca aagcaaggtt
    12121 atgtctatca atcgttttgt tatcaaatat taaaagaaga tattggaaat taacgattga
    12181 tggtaggttt gtattagaat aaatgaaaaa tataaaaagc agtaagctgg tttcgagtag
    12241 aaatcgactt actgcttttt aagttgtgat aagtatatta aacaatgttg ttttaaggtt
    12301 gttgattcat gtagaatatc gttcattatg acacactata ataaatatgt tattgttcag
    12361 aatcaatgat acgttctgga tgactgtata tattaaagcc accatttcga ataaatccaa
    12421 ctgacgtaat gtttaggtca ttagctaaag ttacagcaag cgttgttgga gccgatttag
    12481 ataaaatgac gccaacacca attttcgcgg ctttaattaa aatttctgat gaaatacgtc
    12541 cactgaaaat taatacttta tctcggacag taatatgtcg ctgaatacaa aatccatata
    12601 atttatctag agcgttatgt ctaccaatgt cttgtcgatg tacaaaaaat gtcaaaccat
    12661 cgcttatagc agcattatgc aggccacctg tttcttggta aatatgactt gcactttgta
    12721 atcgagtcat catgttaata atttgtattg gagttaaagt gattttagac atagatgttt
    12781 tagcgatagc agcatcattt tgaaaataaa actcacgact ctttccacaa caagatgcaa
    12841 tcattcgttt tgtggaatat tgaaagcgat cgcctaaatc tttattaagt tcaacatggg
    12901 caaatccttt actgtcatca attagtacag attttaattc atctcgcttt aaaatggcac
    12961 cttccgaagc cagaaatcca atgactaact cctcaaggtt tgttggactg catataacag
    13021 tcgcaaattc ttcaccattc accataattg taagtggaaa ttctgtcaca tattgatctg
    13081 tcttattgaa taattttcca tcttcatatc taacaattgg ttgacctaaa gatacatctt
    13141 tgttcattat ctaacccctt taattagctt gaactttatt ttaaagtaat ttgcttaaaa
    13201 ttttaacata tttgcttaag tttgaaattt gattgataaa aattaatagc gagcaattat
    13261 ttagaatttg attggattta gaaaa
//
LOCUS       DAKPJH010000070        13270 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.070, whole genome shotgun sequence.
ACCESSION   DAKPJH010000070 DAKPJH010000000
VERSION     DAKPJH010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13270
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.070"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            188..2893
                     /gene="acnA"
                     /locus_tag="OY092_001766"
     CDS             188..2893
                     /gene="acnA"
                     /locus_tag="OY092_001766"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HCX1076707.1"
                     /translation="MAANFKEQSKKHFDLNGQSYTYYDLKAVEEQGITKVSNLPYSIR
                     VLLESLLRQEDDFVITDDHIKALSQFGKDGNEGEVPFKPSRVILQDFTGVPAVVDLAS
                     LRKAMDDVGGDITKINPEVPVDLVIDHSVQVDSYANPEALERNMKLEFERNYERYQFL
                     NWATKAFDNYNAVPPATGIVHQVNLEYLASVVHVRDVDGEKTAFPDTLVGTDSHTTMI
                     NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLVNSLPQGATATDLALRVTQELR
                     KKGVVGKFVEFFGPGVQHLPLADRATIANMAPEYGATCGFFPVDDESLKYMKLTGRSD
                     EHIALVKEYLKQNHMFFDVEKEDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKS
                     SFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPY
                     VMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYG
                     CTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAY
                     ALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPSIKEVSDTVDSVVTPELFIEEYNNVYN
                     NNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVT
                     TDHISPAGAIGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLA
                     PGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLG
                     VKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENVQPHDYV
                     KVTAKKHDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ"
     gene            3033..4600
                     /locus_tag="OY092_001767"
     CDS             join(3033..3708,3708..4600)
                     /locus_tag="OY092_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611580.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCX1076708.1"
                     /translation="MKTLKGAIFMPIKPKVDIDVLLYMFQEYEKGVSFQYLIDTLQLD
                     INVNTLYPKYKYYKTHGIETLLTQKQYNRYSKELKLKVVNEYLNSNQSTQDLAIKYNI
                     RSSTQVKNWIKMYTVGKEIKNQSPKTGVYIMKARKTTFEERVTIVEYYLNHKQSYREV
                     AEHFNISYGQIYQWVQKYQAHGKNGLVDGRGKGKPKSMMTPEEQKEAEIQALKAQNRL
                     LEMENDVFKKVSSIGKRNDSKRKQITAYKTIEALKHQYPIQRLCRILGISRASYYKWV
                     HYQPSELELENEQLKREIESIYHKYNGIYGYRRIYIYIRLKLGKQVNRKRIYCLMKEL
                     NLKAVIRQKRKPYRRSTPQITSENKLNRQFDIDTPNKVWLTDVTEFKIKDGSKIYLSA
                     IYDLGAKRIVSYELGPSNNNQLVFKTFNQAIEKVENTKGILFHSDRGFQYTSKTFKHM
                     LDECGMIQSMSRVSKCIDNGPMEGVWGTIKSEIFRGNKHFKFNSVEEATKTIHDFIHF
                     FNYERITLKMADSV"
     gene            4735..5202
                     /locus_tag="OY092_001768"
     CDS             4735..5202
                     /locus_tag="OY092_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HCX1076709.1"
                     /translation="MIYSITEIEARYAETDKMGVIYHGNYATWFEVARLDYISKLGFS
                     YADMEKQGIISPVTDLNVNYKKSIFYPEKVKVKTWVEKYSRLRSVYKYEIFNEKGELA
                     TTGSTELICIKEDTFKPIRLDRYFPDWHEAYSKVQTLNNEGKTVEIMDDIDSL"
     gene            complement(5409..5705)
                     /locus_tag="OY092_001769"
     CDS             complement(5409..5705)
                     /locus_tag="OY092_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesB/YadR/YfhF family protein"
                     /protein_id="HCX1076710.1"
                     /translation="MQIELTDAAVTWFKNELELPENNKVLVFFVRYGGEFQLKQGFSP
                     AFTVEPKEDVDIGYEQQYDDLNVVVAEKDLWYFEDDHIIVNVVDHEDEISYSTK"
     gene            complement(6080..6688)
                     /gene="plsY"
                     /locus_tag="OY092_001770"
     CDS             complement(6080..6688)
                     /gene="plsY"
                     /locus_tag="OY092_001770"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HCX1076711.1"
                     /translation="MMIIVMLLLSYLIGAFPSGFVIGKLFFKKDIRQFGSGNTGATNS
                     FRVLGRPAGFLVTFLDIFKGFITVFFPLWLPVHADGPISTFFTNGLIVGLCAILGHVY
                     PVYLKFQGGKAVATSAGVVLGVNPILLLILAIIFFVVLKIFKYVSLASIVAAICCVIG
                     SLIIQDYILLVVSFLVSIILIIRHRSNIARIFRGEEPKIKWM"
     gene            6894..8885
                     /gene="parE"
                     /locus_tag="OY092_001771"
     CDS             6894..8885
                     /gene="parE"
                     /locus_tag="OY092_001771"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HCX1076712.1"
                     /translation="MNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEI
                     VDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVEVIFTVLHAGG
                     KFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGK
                     TKKTGTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEH
                     YHYEEGIKEFVSYVNEGKEVLHDVATFSGEANGIEVDVAFQYNDQYSESILSFVNNVR
                     TKDGGTHEVGFKIAMTRVFNDYARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELL
                     QFEGQTKSKLGTSEARSAVDSVVADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKA
                     REDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGVSAGGSAKLGRDRKFQAIL
                     PLRGKVINTEKARLEDIFKNEEINTIIHTIGAGVGTDFKIEDSNYNRVIIMTDADTDG
                     AHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQK
                     ELGKGFTLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMGDKVQ
                     PRREWIEKHVEFGMQEDQSILDNSEVQVLENDQFDEEEI"
     gene            8885..11287
                     /gene="parC"
                     /locus_tag="OY092_001772"
     CDS             8885..11287
                     /gene="parC"
                     /locus_tag="OY092_001772"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HCX1076713.1"
                     /translation="MSEIIQDLSLEDVLGDRFGRYSKYIIQERALPDVRDGLKPVQRR
                     ILYAMYSSGNTHDKNFRKSAKTVGDVIGQYHPHGDFSVYEAMVRLSQDWKLRHVLIEM
                     HGNNGSIDNDPPAAMRYTEAKLSLLAEELLRDINKETVSFIPNYDDTTLEPMVLPSRF
                     PNLLVNGSTGISAGYATDIPPHNLAEVIQATLKYIDNPDITVNQLMKYIKGPDFPTGG
                     IIQGIDGIKKAYESGKGRIIVRSKVEEETLRNGRKQLIITEIPYEVNKSSLVKRIDEL
                     RADKKVDGIVEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQISYNFNMVAIS
                     DGRPKLMGIRQIIDSYLNHQIEVVANRTKFELDNAEKRMHIVEGLIKALSILDKVIEL
                     IRSSKNKRDAKGNLIEVFEFTEEQAEAIVMLQLYRLTNTDIVALEGEHKELEALIKQL
                     RHILDNHDALLNVIKEELNEIKKKFKSERLSLIEAEIEEIKIDKEVMVPSEEVILSMT
                     RHGYIKRTSIRSFNASGVEDIGLKDGDSLLKHQEVNTQDTVLVFTNKGRYLFIPVHKL
                     ADIRWKELGQHVSQIVPIEEDEVVINVFNEKDFNTDAFYVFATQNGMIKKSTVPLFKT
                     TRFNKPLIATKVKENDDLISVMRFERDQLITVITNKGMSLTYNTSELSDTGLRAAGVK
                     SINLKAEDFVVTTEGVSENDTILMATQRGSLKRISFKILQVAKRAQRGITLLKELKKN
                     PHRIVAAHVVTGEHSQYTLYSKSNEEHGLINDIHKSEQYTNGSFIVDTDDFGEVIDMY
                     IS"
     gene            11537..12997
                     /locus_tag="OY092_001773"
     CDS             11537..12997
                     /locus_tag="OY092_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HCX1076714.1"
                     /translation="MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSK
                     FVQLRMLPEMFRALVERPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGG
                     PGAVFWMWVIAFIGAASAFIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVF
                     AILITITFAFVFNTVQSNTIAESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLS
                     SLIVPIMAIIYIGMVLVILLFNLDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKR
                     GLFSNEAGMGSAPNAAATAAVPHPVKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKF
                     GDNAPQGVAVTQSALNEHLGSAGGIFLTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRV
                     ILFIFRCLVVVLVFVGAVVKTETVWNTADLFMGLMAIVNIISIIGLSNVAFALMKDYQ
                     KQKKEGKNPVFKPENLEINLFGISAWGANKYKNSDK"
BASE COUNT         4705 a         1915 c         2502 g         4148 t
ORIGIN      
        1 ttctcaatta ataaaaaata cttattacac cttacttgta tgataagttt tgcttatata
       61 ctctgattaa aaagtcaaaa cctaaattaa gcgttttcta agcatgatga gttgtttatc
      121 aataaatata ataatacaat ttaatcaagg catataaata taaaaatgta tcaaggggga
      181 tcattaaatg gctgcaaatt ttaaagagca atcaaaaaaa cattttgact tgaatggcca
      241 aagttatact tactatgatt taaaagctgt agaagagcaa ggtattacta aagtttccaa
      301 tttaccttat tcaattcgtg ttttgttaga atctttactt cgtcaagaag atgattttgt
      361 aattacagac gatcatatta aagctttaag tcagtttgga aaagatggaa atgaaggcga
      421 ggtaccattt aaaccttctc gtgttatttt acaagatttc acaggtgtac cagccgtagt
      481 tgatttagct tctttacgta aagcaatgga tgacgttggg ggagatatta ctaaaattaa
      541 tccagaagta ccggtggatt tagttattga ccactcagtt caagtggata gctatgcaaa
      601 tccagaagct cttgaacgta atatgaaatt agaatttgaa cgtaactatg aacgttatca
      661 gtttttaaat tgggcaacga aagcatttga taattacaat gcagttcctc ctgcaactgg
      721 aatagttcac caagttaact tagaatattt agcaagtgtt gtacatgttc gtgatgtaga
      781 tggtgaaaaa actgcatttc cagatacatt agttggtact gattcacata caacaatgat
      841 aaatggtatt ggcgtactag gatggggtgt tggtggtatt gaagctgaag ctggaatgct
      901 tggacaacct tcttatttcc caattccaga ggttattggt gtacgactag taaattcatt
      961 accacaaggc gcaacagcaa ctgatttagc gttaagagta actcaagagc tacgtaaaaa
     1021 aggtgttgtt ggtaaatttg tggagttctt tggtccaggt gtacaacatt taccactagc
     1081 agaccgtgct acaattgcaa acatggcacc agagtatgga gcaacttgcg gattcttccc
     1141 agttgatgat gaatctctta aatatatgaa gttaactggt agatcagacg aacatatcgc
     1201 gctagtaaaa gaatatttga aacaaaacca tatgttcttt gatgttgaga aagaagatcc
     1261 taattataca gatgttatcg aattggattt atcaacagtt gaagcatcgc tttcaggacc
     1321 aaaacgtcct caagatttaa ttttcttaag tgatatgaaa tcatcatttg aaaattctgt
     1381 aacagctcca gcaggcaacc aaggacacgg tttagataaa agtgaatttg ataagaaagc
     1441 tgaaattaac tttaaagatg gatcaaaagc tacaatgaaa acaggtgata ttgcaatagc
     1501 agcaattaca tcatgtacaa atacatctaa cccttatgta atgttaggtg caggtttagt
     1561 tgctaaaaaa gcagttgaaa aaggcttgaa agttcctgaa tacgttaaaa cttctctagc
     1621 accaggatca aaagttgtta ccggatattt aagagatgct ggcttacaac cttatttaga
     1681 tgatttaggc ttcaacttgg ttggttatgg atgtacaact tgtatcggta attcaggtcc
     1741 tttattacca gaaattgaaa aagcgattgc tgatgaggac ctattagtga catctgtatt
     1801 atctggtaac cgtaactttg aaggtcgtat ccatcctctt gttaaagcca attacctagc
     1861 ttcaccacag ttagttgttg cttatgcatt agctggaacg gttgatattg atttacagaa
     1921 tgaacctatt ggtaaaggta atgacggtga agatgtatat ttgaaagata tttggccatc
     1981 aattaaagaa gtttcagata ccgttgatag tgttgtaaca cctgaattat ttattgaaga
     2041 atataataac gtatacaata acaacgaatt atggaatgag attgatgtaa ctgatcaacc
     2101 tctatatgac tttgatccta attcaacata cattcaaaat ccatcattct tccaaggatt
     2161 atctaaagaa ccgggtacga ttgttccatt aaatggttta cgtgttatgg gtaaattcgg
     2221 tgattctgtg acaactgacc acatctctcc agcaggtgca attggtaaag atacgccagc
     2281 tggtaaatat ttacaagatc accaagtgcc tattcgtgaa tttaattctt atggttcaag
     2341 acgtggtaat cacgaagtaa tggttcgagg tacgtttgct aatatacgta ttaaaaacca
     2401 attagcgcca ggcactgaag gtggttttac aacttattgg ccaacaaatg aagtaatgcc
     2461 tatctttgat gctgcaatga aatataaaga agatggtaca ggtttagttg tattagccgg
     2521 taacgattat ggtatgggtt catctcgtga ctgggcagca aaaggtacaa acttattagg
     2581 tgttaaaaca gttattgcac aaagttatga acgtatccat cgttcaaatt tagttatgat
     2641 gggtgtatta ccattagagt ttaaaaaagg tgaatcagct gattctcttg gtctagatgg
     2701 tacagaagaa atttctgtta atattgatga aaatgttcaa ccacatgact acgtcaaagt
     2761 tactgctaag aagcatgatg gtgatttggt agaatttgac gctatggttc gttttgactc
     2821 acttgttgaa atggattact atcgtcacgg tggtatttta caaatggttt taagaaataa
     2881 attagcgcaa taaaaataga tatcacagca aaattttaat cggtatttga ggcactttga
     2941 tagtgctcaa aaatacttct ataaacttta tgatataata ggtcggttca aaacctttgt
     3001 gaaatgctcc cttcaaagta gacattgaaa aaatgaaaac tttgaaggga gctatattta
     3061 tgccaataaa acctaaagta gacatagatg tactgctata tatgtttcaa gaatatgaaa
     3121 aaggcgtgtc gtttcaatac ttaatcgata cattacaatt agatattaat gtcaatactt
     3181 tgtatcctaa gtataaatat tataaaaccc atggtattga aacactactt acacaaaaac
     3241 aatacaatcg ctattcaaag gaactaaaat taaaagttgt aaatgaatat ttgaattcaa
     3301 atcaatcaac acaagatctc gccattaaat acaatattcg tagttcgaca caagtcaaaa
     3361 attggataaa aatgtatact gtaggaaaag agattaagaa tcaatctccg aaaactgggg
     3421 tgtatatcat gaaagcaaga aaaaccacat ttgaagaacg tgtcacaatt gttgaatatt
     3481 acttgaatca taaacaatct tatagagaag ttgcagaaca ctttaatatc tcatacggtc
     3541 aaatttacca gtgggtccaa aagtatcaag cccatggtaa aaatgggtta gtagatggca
     3601 ggggcaaagg aaaacccaaa tctatgatga cgccagaaga acaaaaggaa gctgaaattc
     3661 aagcattaaa agcacaaaat cgattattag aaatggaaaa tgacgtttta aaaaagtttc
     3721 aagcattgga aagagaaatg attcaaagag aaaacaaatc acggcataca aaacgatcga
     3781 agcgttaaag catcaatacc ctatccaacg cttgtgtcgt attttaggca tttctagagc
     3841 gagttattat aagtgggtac attatcaacc gagtgaactt gaattagaga atgaacagct
     3901 taagcgagaa atagaatcaa tctatcataa gtataatggt atttatggct atcgtcgcat
     3961 ttatatctat attcgattaa aactaggtaa acaagtaaac cgaaagcgaa tttattgttt
     4021 gatgaaagaa cttaatttaa aagcggtaat acgtcaaaag cgaaaacctt atcgacgttc
     4081 aacgccacaa atcacatcag aaaataagct taatcgacaa tttgacattg atacgccaaa
     4141 taaagtttgg ttaacagatg taacagaatt taaaatcaaa gatggtagta agatatattt
     4201 gagtgccatt tatgacttag gtgctaaacg tattgttagt tatgagctag gcccttctaa
     4261 caataatcaa ttagtattta aaacattcaa tcaagcgata gaaaaagtag aaaataccaa
     4321 aggtatttta tttcatagtg accgaggttt tcaatacaca tcgaaaacat ttaaacatat
     4381 gttggatgaa tgtggcatga ttcaaagtat gtcacgtgtt agcaaatgta tcgataatgg
     4441 tcctatggaa ggtgtgtggg gtacaataaa aagtgaaatt tttagaggaa ataagcactt
     4501 taaatttaat agtgtagaag aagctacaaa aacaattcat gattttatcc atttctttaa
     4561 ttatgaaaga attacattaa aaatggctga ttctgtataa caacaaaacc aaccattaat
     4621 tttaattatt taattgtcta ctagactggg tgcagttcat tgtgttcttg gccggcctct
     4681 tcttgtattt tatgttagaa tgagatataa agttaaactg aaagaaggct taaaatgata
     4741 tatagtatta cagaaataga agcgcgttat gctgaaactg ataagatggg tgtaatttat
     4801 cacgggaatt atgcaacttg gtttgaagtt gcgcggttgg attatatatc gaagttaggt
     4861 tttagttatg ctgatatgga aaaacaagga atcatttcac ccgtgactga cctcaatgtc
     4921 aattataaaa agtctatttt ttatccagaa aaagttaaag ttaaaacttg ggttgaaaaa
     4981 tattcgagat tacgttcagt gtataaatat gagattttta atgaaaaagg tgaacttgca
     5041 actacaggtt ccacagaatt gatttgcatt aaagaagata cttttaagcc tatacggttg
     5101 gatcgttatt tcccagattg gcatgaagcc tatagtaaag tgcaaacgct caataatgaa
     5161 gggaaaacag tagagataat ggatgatatt gattctttat aagttactat aaatgtttgg
     5221 agaggcaata ttaacaatta atctatgtta aatagtcaat acgttagcat taacgcaatt
     5281 agcgtgaaga taagctaata tatagcaaaa acgaacttgt tcatacaaca tcagatgtga
     5341 taaaccaaag tgcaacttcc gaggttcagt acacatcaga atgtgtaaac aagttcgttt
     5401 taatttagtt attttgtgga ataagaaatt tcatcttcgt gatcaactac atttacaata
     5461 atgtggtcat cttcaaagta ccacaaatct ttttccgcta cgacaacatt taaatcgtca
     5521 tattgttgtt catagccaat atcaacatct tcctttggtt caactgtaaa agcaggacta
     5581 aatccttgct tgagttggaa ttcgccacca tatcttacaa aaaacacgag cactttatta
     5641 ttttcaggta actcaagttc atttttaaac caagttactg ctgcatcagt aagttctatt
     5701 tgcataacaa tgacctccta tatttattac agaatggtag tgggccaact cgtattgttt
     5761 gtggaatttc ttttcgaaat tctctgtgtt ggagcccacc ccaacctgca cattattgta
     5821 agctgaattt ccataagctt ctatgttggg acccccgacc agaattgaaa aaacctagtt
     5881 ataagcgcat ttcgttctgt caacttcagc taatataaca ttgtggagcc tatgacattg
     5941 atttatgtct cggtctcaaa tgttcttgta aaaaactaag tatagttgga ttttaagtta
     6001 aaaaaattgt ttttgcaaaa ataaaataat ccatcaactg caaaaaaata tgcaatgatg
     6061 gactaatgtc aaaaaattgt tacatccatt ttattttagg ttcttcgcct ctaaaaatcc
     6121 ttgcgatatt agagcgatgt ctaattatca atatgattga aactaagaaa ctaacgacta
     6181 ataaaatata gtcttgaatg ataagcgagc caatcacaca gcaaattgct gcaacgatac
     6241 ttgctaaaga aacatattta aaaatcttca atacaacaaa gaagataatt gcaagtatta
     6301 gtaaaagtat cggattgact cccaagacga cacctgcact agttgcaaca gctttgccac
     6361 cttggaattt taaataaaca ggataaacat gtccaagtat agcgcataag ccaacaatta
     6421 aaccatttgt aaaaaaagta ctaatagggc catctgcgtg aactggtaac cataaaggga
     6481 agaaaacagt tatgaaccct ttgaaaatat ctagaaatgt taccaagaat cctgcaggac
     6541 gacctaatac tctaaagcta ttagtagcgc cagtattacc actaccaaat tgtctaatat
     6601 cttttttgaa aaataatttt ccaattacga atccacttgg gaaagcgccg ataagataac
     6661 ttagtagtaa catgacgatt atcatcataa atattacaca tcctttaata tcttaggact
     6721 attttatcat attcgtttaa attacggcta aaatttttaa aaacggggat taatatatgg
     6781 aattaagcta tgaaagttaa ttgatacttg cattttacgc tgatttatat aagaataact
     6841 attgtatagt tttaaaaacg aacgtacgtt tgcaggaggc gaaatcattg gcaatgaata
     6901 aacaaaataa ttattcagat gattcaatac aggttttaga ggggttagaa gcagttcgta
     6961 aaagacctgg tatgtatatt ggatcaactg ataaacgggg attacatcat ctagtatatg
     7021 aaattgtcga taactccgtc gatgaagtat tgaatggtta cggtaacgaa atagatgtaa
     7081 caattaataa agatggtagt atttctatag aagataatgg acgtggtatg ccaacaggta
     7141 tacataaatc aggtaaaccg acagtcgaag ttatctttac tgttttacat gcaggaggta
     7201 aatttggaca aggcggctat aaaacttcag gtggtcttca cggtgttggt gcttcagttg
     7261 taaatgcatt gagtgaatgg cttgaagttg aaatccatcg agatggtaat atatatcatc
     7321 aaagttttaa aaacggtggt tcgccatctt ctggtttagt gaaaaaaggt aaaactaaga
     7381 aaacaggtac caaagtaaca tttaaacctg atgacacaat ttttaaagca tctacatcat
     7441 ttaattttga tgttttaagc gaacgactac aagagtctgc gttcttattg aaaaatttaa
     7501 aaataacgct taatgattta cgcagtggta aagagcgtca agagcattac cattatgaag
     7561 aaggaatcaa agagtttgtt agttatgtca atgaaggaaa agaagttttg catgacgtgg
     7621 ctacattttc aggtgaagca aatggtatag aggtagacgt agctttccaa tataatgatc
     7681 aatattcaga aagtatttta agttttgtaa ataatgtacg tactaaagat ggtggtacac
     7741 atgaagttgg ttttaaaata gcaatgacac gtgtatttaa tgattatgca cgtcgtatta
     7801 atgaacttaa aacaaaagat aaaaacttag atggtaatga tattcgtgaa ggtttaacag
     7861 ctgttgtgtc tgtacgtatt ccagaagaat tattacaatt tgaaggacaa acgaaatcta
     7921 aattgggtac ttctgaagct agaagtgctg ttgattcagt tgttgcagac aaattgccat
     7981 tctatttaga agaaaaagga caattgtcta aatcacttgt gaaaaaagcg attaaagcac
     8041 aacaagcaag ggaagctgca cgtaaagctc gtgaagatgc tcgttcaggt aagaaaaaca
     8101 agcgtaaaga cactttgcta tctggtaaat taacacctgc acaaagtaaa aacactgaaa
     8161 aaaatgaatt gtatttagtc gaaggtgttt ctgcgggagg ttcagcaaaa cttggacgag
     8221 accgcaaatt ccaagcgata ttaccattac gtggtaaggt aattaataca gagaaagcac
     8281 gtctagaaga tatttttaaa aatgaagaaa ttaatacaat tatccacaca atcggggcag
     8341 gcgttggtac tgactttaaa attgaagata gtaattataa tcgtgtaatt attatgactg
     8401 atgctgatac tgatggtgcg catattcaag tgctattgtt aacattcttc ttcaaatata
     8461 tgaaaccgct tgttcaagca ggtcgtgtat ttatagcttt acctccactt tataaattgg
     8521 aaaaaggtaa aggcaaaaca aagcgagttg aatacgcttg gacagacgaa gagcttaata
     8581 aattgcaaaa agaacttggt aagggcttca cgttacaacg ttacaaaggt ttgggtgaga
     8641 tgaaccctga acaattatgg gaaacgacga tgaacccaga aacacgaact ttaattcgtg
     8701 tacaagttga agatgaagtg cgttcatcta aacgtgtaac aacattaatg ggtgacaaag
     8761 tacaacctag acgtgaatgg attgaaaagc acgttgagtt tggtatgcaa gaggaccaaa
     8821 gtattttaga taattctgaa gtacaagtac ttgaaaatga tcaatttgat gaggaggaaa
     8881 tctagtgagt gaaataattc aagatttatc acttgaagat gttttaggtg atcgctttgg
     8941 aagatatagt aaatatatta ttcaagagcg tgcattgcca gatgttcgtg atggtttaaa
     9001 accagtacaa cgtcgtattt tatatgcaat gtattcaagt ggtaatacac acgataaaaa
     9061 tttccgtaaa agtgcgaaaa cagtcggtga tgttattggt caatatcatc cacatggaga
     9121 cttctcagtg tacgaagcaa tggtccgttt aagtcaagac tggaagttac gacatgtctt
     9181 aatagaaatg catggtaata atggtagtat cgataatgat ccgccagcgg caatgcgtta
     9241 cactgaagct aagttaagct tactagctga agagttatta cgtgatatta ataaagagac
     9301 agtttctttc attccaaact atgatgatac gacactcgaa ccaatggtat tgccatcaag
     9361 atttcctaac ttactagtga atggttctac aggtatatct gcaggttacg cgacagatat
     9421 accaccacat aatttagctg aagtgattca agcaacactt aaatatattg ataatccgga
     9481 tattacagtc aatcaattaa tgaaatatat taaaggtcct gattttccaa ctggtggtat
     9541 tattcaaggt attgatggta ttaaaaaagc ttatgaatca ggtaaaggta gaattatagt
     9601 tcgttctaaa gttgaagaag aaactttacg caatggacgt aaacagttaa ttattactga
     9661 aattccatat gaagtgaaca aaagtagttt agtaaaacgt atcgatgaat tacgtgctga
     9721 caaaaaagtc gatggtatcg ttgaagtacg tgatgaaact gatagaactg gtttacgaat
     9781 agcaattgaa ttgaaaaaag atgtgaacag tgaatcaatc aaaaattatc tttataaaaa
     9841 ctctgattta cagatttcat ataatttcaa catggtcgct attagtgatg gtcgtccaaa
     9901 attgatgggt attcgtcaaa ttattgatag ttatttgaat catcaaattg aggttgttgc
     9961 aaatagaacg aagtttgaat tagataatgc tgaaaaacga atgcatatcg ttgaaggttt
    10021 gattaaagcg ttgtcaattt tagataaagt aatcgaattg attcgtagct ctaaaaacaa
    10081 gcgtgacgct aaaggaaacc ttatcgaagt attcgagttc acagaagaac aggctgaagc
    10141 aattgtaatg ttacagttat atcgtttaac aaacactgac atagttgcgc ttgaaggtga
    10201 acataaagaa cttgaagcat taatcaaaca attacgtcat attcttgata accatgatgc
    10261 attattgaat gtcataaaag aagaattgaa tgaaattaaa aagaaattca aatctgaacg
    10321 actgtcttta attgaagcag aaattgaaga aattaaaatt gacaaagaag ttatggtgcc
    10381 tagtgaagaa gttattttaa gtatgacacg tcatggatat attaaacgta cttctattcg
    10441 tagctttaat gctagcggtg ttgaagatat tggtttaaaa gatggtgaca gtttacttaa
    10501 acatcaagaa gtaaatacgc aagataccgt actagtattt acaaataaag gtcgttatct
    10561 atttataccg gttcataaat tagcagatat tcgttggaaa gaattggggc aacatgtatc
    10621 acaaatagtt cctatcgaag aagatgaagt ggttattaat gtctttaatg aaaaggactt
    10681 taatacagat gcattttatg tttttgcgac tcaaaatggc atgattaaga aaagtacagt
    10741 gcctctattt aaaacaacgc gttttaataa acctttaatt gctactaaag ttaaagaaaa
    10801 tgatgatttg attagtgtta tgcgctttga aagagatcaa ttaattaccg tcattactaa
    10861 taaaggtatg tcattaacgt ataatacaag tgaactatca gataccggat taagggcagc
    10921 tggtgttaaa tcaataaatc ttaaagctga agatttcgtt gttacgacag aaggtgtttc
    10981 tgaaaatgat actatattga tggccacaca acgcggctcg ttaaaacgta ttagttttaa
    11041 aatcttacaa gttgctaaaa gagcacaacg tggaataact ttattaaaag aattaaagaa
    11101 aaatccacat cgtattgtag ctgcacatgt agtgacaggt gaacatagtc aatatacatt
    11161 atattcaaaa tcaaatgaag aacatggttt aattaatgat attcataaat ctgaacaata
    11221 tacaaatggc tcattcattg tagatacaga tgattttggt gaagtaatag acatgtatat
    11281 tagctaaaaa ctatatgcaa tcacgaaatt aaatgataaa atacagtaat gttaaatttt
    11341 gactaaattc aagggattta tattaaatgc tgaccaagta cttatcgtta aattagcgat
    11401 atactttgac caaactaata taaatctctt gtattgtata agaaatgatg atgtatctct
    11461 atatttactg aagtttcaat tcggtctaat tttatagaag gtgcatgatt catgtagagg
    11521 atgcgagggg tttattttga aagatttcga tagtttaatt cctggatggt ttaaagaatt
    11581 tgtccatgtt ggtaccgatt taatatggtc tcaatattta attggtctat tattgacagc
    11641 tggattcttc tttacaatta gttctaaatt cgttcaatta cgaatgttac ctgaaatgtt
    11701 tagagcttta gtagaacgtc cagaaacttt agaagatggt aagaagggta tttcgccatt
    11761 ccaagcattt gctattagtg ctggttcgag agttggtact ggtaatattg ctggtgttgc
    11821 gactgcgatt gttttaggcg gtccaggtgc agtgttttgg atgtgggtta ttgcatttat
    11881 aggtgcagcg agtgcattta tagaagcgac tttggctcag gtttataaag tacatgataa
    11941 agatggtgga ttccgtggtg gtccagctta ctatattact aaaggtttaa atcaaaaatg
    12001 gctaggtatc gtatttgcga ttttaattac aattacattt gcatttgtat ttaacacagt
    12061 gcaatctaat acaattgcgg agtcgttaaa tacgcaatat aatattagtc cagtaatcac
    12121 aggtattatt ttagcaatcg taacagctat tattatattt ggtggtgtac gtagtattgc
    12181 tacgttatct tcgttaattg taccgattat ggctatcatt tacattggta tggttttagt
    12241 aatattgcta tttaatttag atcaaattgt tcctatgata ggtacgatta ttaaaagtgc
    12301 atttggtatc gaacaagtaa ctggtggcgc tgtaggtgct gcggttcttc aaggtatcaa
    12361 acgtggttta ttctctaacg aagctggtat gggttctgcg ccgaatgcag cggcaactgc
    12421 tgccgtgcca caccctgtta agcaaggttt aatccaatca ttaggtgtgt tctttgatac
    12481 aatgttggtt tgtacagcaa ctgcaatcat gattttacta tattcaggat tgaaatttgg
    12541 tgataacgca cctcaaggtg ttgcagttac tcaatcagca cttaatgagc atttaggttc
    12601 tgctggaggt attttcttaa caatagcagt tacactgttt gcattttcat ctgttgtagg
    12661 taattactat tacggtcaat ctaatattga atttttatca acaaaccgtg taatattatt
    12721 tatctttaga tgtcttgttg tagtacttgt ctttgtcggt gcagttgtaa aaacagaaac
    12781 agtatggaat acggcagact tatttatggg cttaatggca attgtaaaca ttatttccat
    12841 tataggactg tccaatgtag cttttgcatt gatgaaagat tatcaaaagc agaaaaaaga
    12901 aggcaagaat cctgtcttta aacctgaaaa cttagaaatt aacttatttg gaattagtgc
    12961 ttggggcgct aacaaatata agaactctga taaataaata tttttaatgt aacgattcat
    13021 tatataaaaa tcaaataaac cctgaggttt tcaaattaaa gcgaaaatct cagggtttta
    13081 aatttgtact caataatcat ctgtatcatt acactagtta atccaagatt tgattatata
    13141 ttaatatagt aaggttgaga tttatttcct ccattggtgt gcaaagacta taccattgat
    13201 aagacatatt gttggataga tgaatataaa tttattttag ctttgcacaa tttaatagta
    13261 cgttttagtt
//
LOCUS       DAKPJH010000071        12531 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.071, whole genome shotgun sequence.
ACCESSION   DAKPJH010000071 DAKPJH010000000
VERSION     DAKPJH010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12531
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.071"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            176..1378
                     /locus_tag="OY092_001774"
     CDS             176..1378
                     /locus_tag="OY092_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HCX1076715.1"
                     /translation="MSKLILAINAGSSSLKFQLIRMPEEELVTKGLIERIGLKDSIFT
                     IEVNGEKVKTVQDIKDHVEAVDIMLDAFKAHNIINDINDIDGTGHRVVHGGEKFPESV
                     AITDEVEKEIEELSELAPLHNPANLMGIRAFRKLLPNIPHVAIFDTAFHQTMPEKAYL
                     YSLPYHYYKDYGIRKYGFHGTSHKFVSQRAAEMLDKPIEDLRIISCHIGNGASIAAID
                     GGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVLEILNKESGLLGL
                     SGTSSDLRDLSEEAESGKARSQMALDVFASKIHKYIGSYAARMHGVDVIVFTAGIGEN
                     SVEIRAKVLEGLEFMGVYWDPKKNENLLRGKEGFINYPHSPVKVVVIPTDEESMIARD
                     VMTFGGLK"
     gene            complement(1624..2124)
                     /locus_tag="OY092_001775"
     CDS             complement(1624..2124)
                     /locus_tag="OY092_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HCX1076716.1"
                     /translation="MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSR
                     TYSSYEVYDAQFTEKSKHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAH
                     EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQL
                     REKYQN"
     gene            2265..3383
                     /gene="ald"
                     /locus_tag="OY092_001776"
     CDS             2265..3383
                     /gene="ald"
                     /locus_tag="OY092_001776"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HCX1076717.1"
                     /translation="MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSF
                     FEDVDYKEAGAEIVAEQAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKL
                     TQALIDRKVISIAYETVQLPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLG
                     GVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIM
                     SNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFET
                     TDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFK
                     SNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL"
     gene            3507..3620
                     /locus_tag="OY092_001777"
     CDS             3507..3620
                     /locus_tag="OY092_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076718.1"
                     /translation="MNDIDLIHYMLLMNIPAYVFLACLLHIAFRLGQKFMS"
     gene            complement(3699..4754)
                     /locus_tag="OY092_001778"
     CDS             complement(3699..4754)
                     /locus_tag="OY092_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HCX1076719.1"
                     /translation="MTKISKIIDELNNRQADAAWITTPLNVYYFTGYRSEPHERLFAL
                     LIKKDGKQVLFCPKMEVEEVKASPFTGEIVGYLDTENPFSLYPQTINKLLIESEHLTV
                     ARQKQLISGFNVNSFGDVDLTIKQLRNIKSEDEISKIRKAAELADKCIEIGVSYLKEG
                     VTEREVVNHIEQTIKQYGVNEMSFDTMVLFGDHAASPHGTPGDRRLKSNEYVLFDLGV
                     IYEHYCSDMTRTIKFGEPSKETQEIYNIVLEAETSAIQAIKPGIPLKDIDHIARNIIS
                     EKGYGEYFPHRLGHGLGLQEHEYQDVSSTNSNLLEAGMVITIEPGIYVPGVAGVRIED
                     DILVTNEGYEVLTHYEK"
     gene            4929..5618
                     /locus_tag="OY092_001779"
     CDS             4929..5618
                     /locus_tag="OY092_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCX1076720.1"
                     /translation="MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYI
                     VLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGS
                     VKFVQAFHSSSFTHENGIPVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV
                     DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDV
                     QILKPGESVQF"
     gene            complement(5923..6336)
                     /locus_tag="OY092_001780"
     CDS             complement(5923..6336)
                     /locus_tag="OY092_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HCX1076721.1"
                     /translation="MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQ
                     ASIKAGVHLNKLTEERSKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEI
                     VVLSNRKAEDKKKFVLGSVSHKVAKRATIPVLIVK"
     gene            6541..7839
                     /locus_tag="OY092_001781"
     CDS             6541..7839
                     /locus_tag="OY092_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HCX1076722.1"
                     /translation="MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDAD
                     KMGMVATIDRVGTVRIEKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGA
                     MELKDILKYIGPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPV
                     LSSSYDTFLVANIINKALFNQKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANR
                     TGHTRFPVVNESYKLVGIVTSREMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMI
                     WEGIELIPVVSSNKKTVGVINRQDVLKSMQLLGRQPQMGETINDQIAKYITMNQDGIT
                     VEVSPLLINHYGTVSKAAFVSIIEETIQYEMRKFKKGNVMIENLNIVYIKTVPIESHI
                     TVRFGILDVGRNFAKIEVNMHSQNDKVASALVICQMFDEV"
     gene            8148..9089
                     /gene="pde2"
                     /locus_tag="OY092_001782"
     CDS             8148..9089
                     /gene="pde2"
                     /locus_tag="OY092_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pApA hydrolase Pde2"
                     /protein_id="HCX1076723.1"
                     /translation="MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQK
                     FPQKQVFAVGEAESSLSFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLI
                     KIDHHPAVDQYGDINLVNTNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTG
                     RFLFNNTSEHTMEIAGKLIGHDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMGDGFC
                     QVKITEDVLEQFGIQPNEASQFVNTIADIKGLKIWVFAVDEGSEIRCRLRSKGQLIIN
                     DIAQDFGGGGHPNASGVSVDSWDEFEQLATALRTKLN"
     gene            9110..12307
                     /locus_tag="OY092_001783"
     CDS             9110..12307
                     /locus_tag="OY092_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HCX1076724.1"
                     /translation="MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVDALAITDTNVLY
                     GFPKFYDTCIANNIKPIFGMTIYVTNGLNTVETVVLAKNNDGLKDLYQLSSEIKMNAL
                     EHVSFELLKRFSNNMIIIFKNVADEHRDIVQVFDSHEDTYLDHRSVLVQGIKHVWIQN
                     VCYQTRQDADTISALAAIRDNTKLDLIHDQEDFGAHFLTENEIQQLDVNQEYLTQVDV
                     IAQKCNAELKYHQSLLPQYQTPNDESAKKYLWRVLVTQLKKLELNYDVYLERLKYEYK
                     VITNMGFEDYFLIVSDLIHYAKTHDVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLF
                     ERFLNPERVTMPDIDIDFEDTRRERVIQYVQEKYGELHVSGIVTFGHLLARAVARDVG
                     RIMGFDEVTLNEISSLIPHKLGITLDEAYQIDDFKKFVHRNHRHERWFSICKKLEGLP
                     RHTSTHAAGIIINDHPLYEYAPLTKGDTGLLTQWTMTEAERIGLLKIDFLGLRNLSII
                     HQILTQVKKDLGINIDIENIPFDDQKVFELLSQGDTTGIFQLESDGVRSVLKKLKPEH
                     FEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQYLHPHLEPILKNTYGVIIYQEQIMQ
                     IASTFANFSYGEADILRRAMSKKNRAVLESERQHFIEGAKQNGYHEDISKQIFDLILK
                     FADYGFPRAHAVSYSKIAYIMSYLKVRYPNYFYANILSNVIGSEKKTAQMIEEAKKQG
                     ITILPPNINESHCFYKPSQEGIYLSIGTIKGVGYQSVKVIVDERYQNGKFKDFFDFAR
                     RIPKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGDLNIEQDGFLFDILTPK
                     QMYEDKEELPDALISQYEKEYLGFYVSQHPVDKKFVAKQYLTIFKLSNAQNNKPILVQ
                     FDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQFKKYEELLSHNDLFIVSGKFDLR
                     KQQRQLIINEIQTLATFEEQKLAFAKQIIIRNKSHIDAFEEAIKATKENANDVVLSFY
                     DETIKQMTTLGYINQKDSMFNNFIQSFNPSDIRLI"
BASE COUNT         4274 a         1835 c         2297 g         4125 t
ORIGIN      
        1 tattcctgat ttcaaaaatc cttcacaatt tcaaggattt atgacagagt taaatcagtg
       61 gatggacaca aatcgtccta aaaaataatc tgtaatagta tagtcataaa actgtatgaa
      121 tgataaaatg agaaatgaaa tagtataaaa agcaaacgat ggaggatcat tacttatgtc
      181 aaaattaatc ttggctatca atgctggtag ttcatcatta aaatttcaat taattagaat
      241 gcctgaagag gaattagtaa caaaaggttt aatagaaaga atcggattga aggattcaat
      301 ttttacaatt gaagtcaacg gggaaaaagt taaaacagta caagatatca aggatcacgt
      361 tgaggcagtt gatatcatgt tggatgcttt taaagcgcat aatattatta atgatattaa
      421 cgatatcgat ggaacaggtc accgtgttgt acatggtggt gaaaaattcc ctgaatcagt
      481 agctattact gatgaggttg aaaaggaaat tgaagaatta agcgaattag caccgcttca
      541 caacccagct aacttgatgg gtattcgtgc tttccgtaaa ttattaccaa atatccctca
      601 tgtggcaatt tttgatacag cattccatca aacaatgcct gaaaaagcat atctatatag
      661 cttgccatat cattattata aagattatgg cattcgtaag tatggtttcc atggtacaag
      721 ccataaattt gtatcacaaa gagcggcaga aatgttagat aagccaattg aagatttacg
      781 tattatttca tgtcacattg gtaatggagc atcaattgca gctatcgatg gcggtaaatc
      841 tattgataca tcaatgggct tcacaccact tgctggtgta acaatgggta ctcgttctgg
      901 taatattgac cctgctttaa ttccatttat tatggaaaaa acaggtaaaa ctgctgaaca
      961 agtattggaa atcttaaaca aagaatcagg tttattagga ttatcaggta catctagtga
     1021 tttacgtgac ttatcagaag aagctgaatc aggtaaagca cgttcacaaa tggctttaga
     1081 tgtatttgct tctaaaattc acaaatatat tggatcatat gctgcgagaa tgcatggtgt
     1141 tgatgttatc gtatttacag caggtatcgg tgaaaactca gtagaaattc gtgcgaaagt
     1201 tcttgaaggc ttagaattta tgggtgttta ctgggatcct aagaaaaatg aaaacttact
     1261 acgtggtaaa gaaggattta ttaactatcc tcattcacca gttaaagttg tcgttattcc
     1321 aactgatgaa gaaagtatga ttgcccgtga tgttatgaca ttcggtggtt taaaataatt
     1381 tttaaataaa tattaagcgt ctatctccgc tacaattata tgtaggaggt agacgctttt
     1441 tgtattgttt gaaaattaac tagtgtaatg tctcttttca cgaatatctt aaagaattaa
     1501 gtagtcgaag aagattatga aaacattatt aagtgagttt tatttataaa caataaaaaa
     1561 ccaagtgcag aaagttgcac ttggttcata atgatcaagt agttatctaa tgatcatcta
     1621 tatttaattt tgatattttt cacgtaattg agttgttgca acttgtggtt ggaagtctgc
     1681 tggtaactct tcagtacgaa caactaacac gtcacatggc gcatgacgaa cgatagattc
     1741 tgatacagaa ccaacaataa atctttccac ggcatttaag cctgatgtac cactcataat
     1801 caagtctgca ttaatttcat gtgcaagctt tttaggaatg atagatttag gagagccaaa
     1861 ctctagacgc gtttctacat ctttaacacc agcgttagta gctacttctt tataaccatt
     1921 taataattct tctgcaaaat gcttagattt ttcagtaaat tgagcatcat aaacttcata
     1981 agaagaatat gttcttgaat caattacatt cacaattgtt aacttcgcat cgttacgttt
     2041 agcaacacca actgctctgt taaatgccca ttccgcttca tgtgaaccgt caactgcgat
     2101 taaaatattt ttgtaagtaa tcatagtaag tgcctccttg ttctttctta attatatttt
     2161 accacaattt tcggaaaagt cagtgtaata acctttacaa ttttgtggat ttttgattgc
     2221 gctttcaaaa tggtcgcgtt aagatggtta tggaggtgga tggtatgaaa attggtatac
     2281 caagggagat taaaaataat gaaaatcgtg ttggtttatc accaagtggt gtgcacgctt
     2341 tagtagaaag tgggcatact gttttagtgg aaacaaatgc gggttcagga tcgttctttg
     2401 aagatgtaga ttacaaagaa gcaggtgctg agattgttgc tgaacaagca aaagtttggg
     2461 atgtggatat ggttattaaa gttaaagaac cacttgaatc tgaatatcca tattttaaag
     2521 aagggcttgt attattcact tatcttcatt tagcaaatga agaaaaatta acacaagctt
     2581 tgatagatag aaaagtaatt agcattgcat atgagactgt gcagttacca gaccgatctt
     2641 taccattgtt atcaccaatg agtgaggtag caggaagaat gtcagctcaa gttggcgcag
     2701 agttcctaca aaaacttaat ggtggtatgg gaattctact aggtggtgtc ccaggagtac
     2761 ctaagggtaa agtaactatt atcggtggtg gtcaagcagg aacaaatgca gctaaaattg
     2821 cactaggact aggtgcagat gttacgattt tagatgttaa tccaaagcgt ttacaacaat
     2881 tagatgattt attcggtgga cgtgtacata caattatgtc aaatccgttg aatattgagt
     2941 tgtatgttaa acaaagtgat ttagtaatag gtgcagtttt aattccaggt gctaaagcgc
     3001 caagacttgt aacagaagac atgattaaac aaatgaaaaa tgggtcagtt attattgaca
     3061 ttgctattga tcaaggcggt atttttgaaa caactgataa aattacgaca catgatgatc
     3121 ctacatatat taagcatggt gtggttcatt atgcagttgc aaatatgcca ggtgcagtac
     3181 cgcgtacttc gacgttagct ttaaataatg ctacgctacc ttatgcgctc atgctagcta
     3241 ataaagggta tagagaagca tttaaatcaa atcaaccatt atcattaggt ttaaatactt
     3301 acaaaggtca cgtaaccaat aaaggcgttg cagaggcatt tgaaatggaa tataaatctg
     3361 tagaagaagc attacaatta taatttgaat ttaatgaaaa gggaatggat tacagcgtac
     3421 taaagaatga cgttatcatc tccttggtta ttaaaattaa ataatgataa attaaagcta
     3481 gaaacaatgc gaagaaatca tcgaacatga atgatattga tttgattcat tacatgttac
     3541 tgatgaacat acctgcatat gtgtttctag cttgtttgtt acatattgca tttagacttg
     3601 gacaaaaatt tatgtcctag gcgctacaat gttatattgg cagtgtttga ctgaatgaga
     3661 atgcgcttgt aacaagcttt tcatttttgt ctcactcctt atttttcgta atgtgttaat
     3721 acttcatatc cttcattagt gacaagtatg tcatcttcaa ttcttacacc tgcaacacct
     3781 ggtacataaa tacctggttc gattgtaatg accatgccag cttctaacaa attagaatta
     3841 gtacttgaaa catcttgata ttcatgttct tgtaatccta gaccatgacc taagcgatga
     3901 gggaaatatt caccataacc tttttctgaa ataatatttc tagcgatatg atcgatatct
     3961 tttaaaggta ttccaggttt aattgcttgg attgcagatg tttctgcttc taatacaata
     4021 ttataaattt cttgtgtttc tttgctaggt tcaccaaatt taatggtacg tgtcatatcg
     4081 ctacaataat gctcataaat tacacctaaa tcaaatagta catattcatt gctttttaat
     4141 ctgcgatctc ctggtgtgcc atgaggtgat gcggcatgat ctccaaataa aaccatcgta
     4201 tcaaaactca tttcattgac gccgtattgt ttgattgttt gctcaatatg gttgactact
     4261 tcacgttcag tcacaccttc ttttaaataa gaaacaccta tttcgataca cttatctgct
     4321 aactcagcag ctttacgtat tttactaatt tcatcttcgg atttaatatt tctcaattgt
     4381 ttgattgtta aatcaacatc tccgaatgaa ttgacattga aaccagagat taattgtttt
     4441 tggcgtgcta ctgttaagtg ctcgctttca attagtaatt tattgattgt ttgaggataa
     4501 agtgaaaaag gattttcagt gtctaaatat ccaacgattt cacctgtgaa aggtgatgct
     4561 ttgacttctt cgacttccat ttttggacaa aatagtactt gtttcccatc tttcttaatc
     4621 aataatgcaa ataatctttc atggggttcg ctacggtatc cagtaaagta atatacattc
     4681 aacggtgttg taatccatgc tgcatcagct tgtcgattgt tcagttcgtc tattattttt
     4741 gatatttttg tcattttata aacactcctc aacataatat tacttccatt ttatgccaat
     4801 tattattaga tttcaaaatc aagctaattc attaactaga ttttcaattt ttaaaatttg
     4861 agaatttgtt ataattaaga ggcaaaaggg tactaaattt atatagcaat tgataggagg
     4921 atgctcaaat gaagttatca tttcatggtc aatcaacgat ttatttagaa gggaacaaca
     4981 aaaaagttat cgtagatccg tttatttcaa ataaccctaa gtgtgatttg aatattgaaa
     5041 cagtgcaggt agactatatc gttttaacgc acggtcattt tgatcacttt ggtgatgttg
     5101 tggaactagc aaagaaaaca ggagcaacag taattggaag tgcagaaatg gctgactatc
     5161 tttcttcata tcacggtgtt gaaaatgttc atggtatgaa tattggtggt aaagcaaact
     5221 ttgatttcgg aagcgttaaa tttgttcaag catttcatag ttcaagtttt acacatgaaa
     5281 atggtattcc agtttattta ggtatgccaa tgggtatcgt gtttgaagtt gaagggaaaa
     5341 caatttatca tactggtgat acaggtctgt ttagtgacat gtcacttatt gcgaaacgtc
     5401 atccagttga tgtatgtttt gtaccaattg gagataattt tacgatgggt attgatgatg
     5461 caagttatgc tattaatgaa tttattaaac caaaaatttc tgtaccgatt cattatgata
     5521 cattcccatt aatcgaacaa gatccacaac aatttaaaga tgctgttaat gtaggggacg
     5581 tgcaaatttt aaaaccaggt gaatctgttc agttttaaat agaatataga ttttacacta
     5641 aaaaacacct cgctaatcta tgtggaagtt atcgtctgca tatttttagt gggtgttttt
     5701 atattctact aattcagtta cgacgtggac gggggacatc agtggttctt tatcatttct
     5761 gacctactct cgtaatttta gttttataca attagacatt gattataaat ttactacgat
     5821 ataaaaaatc cagaaccaca gtcataatca tttcttgtgt ttacttagtc gtttgagact
     5881 gcatcatgat tgaaagatta tttgtgattc tggataaaaa ttttatttaa cgattaatac
     5941 agggatagtc gcacgttttg ctactttgtg gctgacactt ccaagtacaa atttcttttt
     6001 gtcttctgct ttacggttac ttaaaacaac aatttcgtat ttaccgctat tagcatgttt
     6061 taatagttct tcttttgcat taccacgaac aattatttgg tcataatcaa taccataatc
     6121 ttctaaagct ttgcgtgttt tttccaatcg cttgcttcgt tcttcagtaa gtttgtttaa
     6181 atgaacacct gctttaattg atgcttgagc atcttgttcg ctgattgcgt ttaaaactgt
     6241 tacgactgta ccttcgccag ctaatttaga cacttctttt agtgcttttt cattttttaa
     6301 ctgagtgtct acaccaagta atatattttt atacattagt acatccctcc tcacttacat
     6361 tctaataaat aataatggat ttttccattt aaaattaaag attttgtgat ctttgtgttt
     6421 gttgtatatt ttcaaaaaat aaaataggtg aaacgatcat tatttcattt cacttcaatg
     6481 ctttttatcc aaaataaagt tataatgtag ttaatactgt tcgaaaagaa gaggtaaaga
     6541 atgacaaaac atgaacaaat tttagattat attgaatcgt tatctatagg ctctaaaatt
     6601 tcggtgcgta aaatcgctaa atttttaaac gtatctgaag ggacagcata tcgtgcaatt
     6661 aaagatgctg ataaaatggg catggtcgca acgatagatc gtgttggtac ggttcgaatc
     6721 gaaaaacgta atcgtaatga aattgaacat ttaactttta atgaaattgt caatattatt
     6781 gatggccaag tgttaggtgg caataaaggt atcactaaga tggtatctaa atttgcaatt
     6841 ggagcaatgg aactcaaaga tattttaaaa tatattggtc caaagacatt attgattgtc
     6901 ggaaatcgcg aagatgtgca gattgaagct ttaaaaagag gtacggctat attaattact
     6961 ggtggattta agccatctaa taaagttatt aattttgcga atgaacatga tttacctgtt
     7021 ctatcatcaa gttatgatac attcctagtt gcaaatatta tcaacaaagc actttttaat
     7081 cagaaaatac gaaaagatat cttaatagtt caagatataa tgacgccatt agatgattta
     7141 tctgtgctgt ttgatacgat gaaaatagca gattataagc gtatggcgaa tcgaactggc
     7201 catacaagat ttccggtagt caatgagtct tataaattag taggtattgt aacaagtcga
     7261 gagatgatta atacaaagga cgacgacgaa atagataaag tgatgacgcg aaatcctatt
     7321 tatgtaaatg ctatgagtac agtagcaagt tgtgcgcata tgatgatttg ggaaggtatt
     7381 gaattgattc ctgtcgtttc gagtaataaa aagacagtgg gtgtgattaa tagacaagat
     7441 gttttaaagt ctatgcaact tttaggaaga cagcctcaga tgggtgaaac aattaacgat
     7501 caaatcgcca aatatataac aatgaatcaa gatggaatta cagtagaagt ttcaccactt
     7561 ttaatcaatc attacggaac agtaagtaaa gcggcatttg taagtattat agaagaaaca
     7621 atacaatatg aaatgcgtaa atttaaaaaa ggtaatgtca tgatagagaa cttaaatatc
     7681 gtgtatatta aaacagtacc tattgaatca catataacag tgcgctttgg catactagac
     7741 gtcggaagaa acttcgccaa aatagaagtg aacatgcata gtcaaaacga caaagtagcg
     7801 agcgctctcg tgatatgcca aatgtttgac gaagtatagg aacttagcag agaaaatagg
     7861 cataagatag atttcgcaca aacgttggag cccaacttgc acattatagt aagctgacat
     7921 tacgtcagct tctgtgttgt ggcccatccc aacttgcatt gtttgtagaa tttcttttcg
     7981 aaattctcta tgttggggcc cctgaactaa atagtatgaa aatatatatc taaataatta
     8041 aaacgggcaa atagtttaat atggtagtaa caatttttat aatttagata ttttgatata
     8101 gactaatgct taaattaagc aacttttcta aaaaagggag tatgaaaatg attagtactt
     8161 tgaatgaaat tatgaaatgt atcgaagaca acgatacaat tattatacac agacatgtta
     8221 gaccagatcc tgatgcatat ggttcacaac ttggtttaaa atactatatt cagcagaaat
     8281 ttccgcaaaa gcaagtattt gcagtgggtg aagcggaatc atcattaagt tttattggag
     8341 agttagataa cattgatgat aaaacatatc aagatgcgct tgtaattgta tgtgatactg
     8401 ccaatgctcc acgaattgac gatgaacgtt atagtacagg tcgtaaactt attaaaatag
     8461 atcatcatcc tgcagttgat cagtatggtg atattaattt agttaatacg aacgcgtcat
     8521 ctacaagtga aatcatttac gatttaatct cacattttaa tgatgaagca attgttaata
     8581 aagatatcgc gagcgtttta tatcttggta tcgtcggtga tactgggcga ttccttttta
     8641 acaatacctc agaacatact atggaaattg ctggaaagtt aattgggcat gatattgatc
     8701 ataatgcgct tttaaataaa atgatggaga aggatccaaa aatgttgccg tttcaaggtt
     8761 atgttttaca acatttcgaa cttatgggtg atggattctg ccaagttaaa ataactgaag
     8821 atgtattgga gcaattcggt attcagccaa atgaagcatc tcagtttgtt aatacaattg
     8881 ctgacatcaa aggcttgaaa atatgggtgt ttgcagttga tgagggtagt gaaataagat
     8941 gtcgcttacg ctctaaaggg caattgatta ttaatgatat tgcgcaagat tttggtggcg
     9001 gtggtcatcc gaatgcgtca ggagtttcag tggacagctg ggatgaattt gagcaacttg
     9061 ctacagcttt acgcacaaaa cttaactaat agaaaggagc cattcaatca tggtggcata
     9121 tttaaatatt catacggctt atgatttgtt aaattcaagc ttaaaaatag aagatgccgt
     9181 aagacttgct gtgtctgaaa atgttgatgc acttgccata actgacacca atgtattgta
     9241 tggctttcct aaattttatg atacatgtat tgccaataat ataaagccga tttttggtat
     9301 gacaatatac gtgacaaatg gattaaatac agtcgaaaca gttgttctag ctaaaaataa
     9361 tgatgggtta aaagatttgt atcaactatc atcggaaata aaaatgaatg cattagaaca
     9421 tgtgtcgttt gaattattaa aacgattttc taacaatatg attatcattt ttaaaaatgt
     9481 tgcagacgaa catcgtgaca ttgttcaagt ttttgattcg catgaagata cgtatttaga
     9541 tcatcgaagt gttttagttc agggtataaa gcacgtatgg attcaaaatg tttgttacca
     9601 aacacgtcaa gatgcagata caatttctgc actcgcagcg ataagagaca atacaaaatt
     9661 agacttaatt catgatcaag aagattttgg tgcgcatttt ttaactgaaa atgagattca
     9721 gcaacttgat gtgaatcaag aatatttaac gcaggttgat gttatagctc aaaagtgtaa
     9781 tgcagaatta aaatatcatc aatctctact tcctcaatat cagacaccta atgatgaatc
     9841 agctaaaaaa tatttgtggc gtgtcttagt tacacaatta aaaaaattag aacttaatta
     9901 tgacgtctat ttagagcgat tgaaatatga gtataaagtt attactaata tgggttttga
     9961 agattatttc ttaatagtaa gtgacttaat ccattatgcg aagacacatg atgtgatggt
    10021 aggtccaggt cgtggttctt cagctggctc actggtcagt tatttattgg gaattacaac
    10081 gattgatcct attaaattca atctattatt tgaacgcttt ttaaacccag aacgtgtaac
    10141 aatgcctgat attgatattg actttgaaga tacacgccga gaaagggtca ttcagtacgt
    10201 ccaagaaaaa tatggcgagc tacatgtatc tggaattgtg actttcggtc atctgcttgc
    10261 aagagcggtt gctagagatg ttggacgaat tatggggttt gatgaagtta cattaaatga
    10321 aatttcaagt ttaatcccac ataaattagg aattacactt gatgaagcat atcaaattga
    10381 cgattttaaa aagtttgtac atcgaaacca tcgacatgaa cgctggttca gtatttgtaa
    10441 aaagttagaa ggtttaccaa gacatacatc tactcatgcg gcaggaatta ttattaatga
    10501 ccacccatta tatgaatatg cccctttaac gaaaggggat acaggattat taacgcaatg
    10561 gacaatgact gaagccgaac gaattgggtt attaaaaata gattttctag ggttgagaaa
    10621 cttatcgatt attcatcaaa tcttaacaca agtcaaaaaa gatttaggta ttaatattga
    10681 tatcgaaaat attccgttcg atgatcaaaa agtgtttgaa ttgttgtcgc aaggagatac
    10741 aactggcata ttccaattag agtctgacgg tgtaagaagt gtattaaaaa aattaaagcc
    10801 ggaacacttt gaagatattg tggctgtaac ttctttgtat agaccaggtc caatggaaga
    10861 aattccaact tacattacaa gaagacatga tccaagcaaa gttcaatatt tacatccaca
    10921 tttagaacct atattaaaaa atacttacgg tgttattatt tatcaagagc aaattatgca
    10981 aatagcgagc acatttgcaa acttcagtta tggtgaagcg gatattttaa gaagagcaat
    11041 gagtaaaaaa aatagagctg ttcttgaaag tgagcgtcaa cattttatag aaggtgcaaa
    11101 gcaaaatggt tatcacgaag acattagtaa gcaaatattt gatttgattc tgaaatttgc
    11161 tgattatggt tttcctagag cacatgctgt cagctattct aaaattgcat acattatgag
    11221 ctatttaaaa gtccgttatc caaattattt ttacgcaaac attttaagta atgttattgg
    11281 aagtgagaag aaaactgctc aaatgataga agaagcaaaa aaacaaggta tcactatatt
    11341 gccaccgaac attaacgaaa gtcattgttt ttataaacct tcccaagaag gcatttattt
    11401 atcaattggt acaattaaag gtgttggtta tcaaagtgtg aaagtgattg ttgatgaacg
    11461 ttatcagaac ggcaaattta aagatttctt tgattttgct agacgtatac caaagcgagt
    11521 caaaacgaga aagttacttg aagcactgat tttagtggga gcgtttgatg cttttggtaa
    11581 aacacgttca acgttgttgc aagctattga tcaagtgttg gatggcgatt taaacattga
    11641 acaagatggt tttttatttg atattttaac gccaaaacag atgtatgaag ataaagaaga
    11701 attgcctgat gcacttatta gtcagtacga aaaagaatat ttaggatttt atgtttcgca
    11761 acacccagta gataaaaagt ttgttgccaa acaatattta acgatattta aattgagtaa
    11821 cgcacagaat aataagccta tattagttca gtttgataaa gttaaacaaa tccgaactaa
    11881 aaatggccaa aatatggcat tcgtcacatt aaatgatggc atcgaaactt tagatggtgt
    11941 gattttccct aatcagttta aaaagtacga agagttgtta tcacataatg acttgtttat
    12001 agttagcggg aaatttgacc ttagaaagca acaacgtcaa ttaattataa atgagattca
    12061 gacattagcc acttttgaag aacaaaaatt agcatttgcc aaacaaatta taattagaaa
    12121 taaatcacat atagatgcgt ttgaagaggc gattaaagct acgaaagaga atgctaatga
    12181 tgttgtgtta tccttttatg atgaaacgat taaacaaatg actactttag gctatattaa
    12241 tcaaaaagat agtatgttta ataattttat acaatccttt aaccctagtg atattaggct
    12301 tatataactt ttatcaacta ataaattatg atatagtaaa ctgatggtta gatatttttt
    12361 aaccatcagt ttgcgtttat attagttttt tatgcttatt atttttatga gtttcacttt
    12421 acattattga ttaatccata agaataatta gcacaaaaag cagtatacat aaattgagta
    12481 aagaattttg tcgatatatc gtgcgaaaaa ataataactt tttgatatat t
//
LOCUS       DAKPJH010000072        12309 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.072, whole genome shotgun sequence.
ACCESSION   DAKPJH010000072 DAKPJH010000000
VERSION     DAKPJH010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12309
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.072"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(453..1274)
                     /locus_tag="OY092_001784"
     CDS             complement(453..1274)
                     /locus_tag="OY092_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HCX1076725.1"
                     /translation="MKFKIPENFNDLSLRDIFQQLKVPKKDLHHLNMSKDITINDKPA
                     RLMDKVHTGDDVFVPTTDEKSNYVPSYRYAQIKYEDDDMAIVMKPKGVKTHPNDLKES
                     NTLMNHVIYTVDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEDNDITRIYKAN
                     VKALLPLKPQTIDMPIGKDKFHSNKRRVSPTGQRAITHILTSKMIKETVCQLEIKLDT
                     GRTHQIRVHLAEIGHPVIGDPLYGDSTLRQLELESYKIEFVHPLTKEVISVSLDD"
     gene            1437..2549
                     /locus_tag="OY092_001785"
     CDS             1437..2549
                     /locus_tag="OY092_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HCX1076726.1"
                     /translation="MEQRTRLALLKEIAEFLNEETEMYSMTQGALKYLIEGSNFTTGW
                     IFFINSVGEHELVSHVALPQSLTADHCHYIKDGSCWCVKAFNQGRLMKASNIVNCSRI
                     NLASKAFPSQNDNITHHATVPLKSGQEQFGILNVASPNTEIYSDEDLELLESVAFQLG
                     SAIKRIYLTDREKEAAKINERNRLARDLHDSVNQMLFSVKLTAHAAYGVSNESIAKQA
                     FKTIEETSQNAVNEMRALIWQLKPVGLEQGLIHALTAYSKLMHIQLNVNVEGLIDLSN
                     EIEENIYRALQECINNVKKHADTNKMDLTLKQMNDILYIDVIDYGQGFEIDNVQIASS
                     HGINNIKQRVKLLRGKVTFHSQPTKGTQIQFTIPIK"
     gene            2571..3194
                     /locus_tag="OY092_001786"
     CDS             2571..3194
                     /locus_tag="OY092_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1076727.1"
                     /translation="MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLK
                     EHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVLVLTSYVDDEHVISAINKGADGY
                     EMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
                     GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI"
     gene            3550..4014
                     /locus_tag="OY092_001787"
     CDS             3550..4014
                     /locus_tag="OY092_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1076728.1"
                     /translation="MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEK
                     ERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNN
                     IETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI"
     gene            4193..5317
                     /locus_tag="OY092_001788"
     CDS             4193..5317
                     /locus_tag="OY092_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HCX1076729.1"
                     /translation="MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVP
                     FTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKD
                     QLSIKQITSQLDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLDQH
                     VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQ
                     ELIRLTSHPKARTIVTSLITNEYQTFKDKPLNELLDAAQFNEIAENLSVYVTTYASKQ
                     ANKPVVTLMPQFVDYLEGQLSSKLANLIIEQLSIHLSTIMKKVDLRGLIEEQINTFDL
                     DYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV"
     gene            5386..5730
                     /locus_tag="OY092_001789"
     CDS             5386..5730
                     /locus_tag="OY092_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HCX1076730.1"
                     /translation="MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKLFDE
                     FRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQ
                     IIVKPLDEIYAD"
     gene            6502..7698
                     /locus_tag="OY092_001790"
     CDS             6502..7698
                     /locus_tag="OY092_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HCX1076731.1"
                     /translation="MVKFIHCSDLHLDSPFKSKSHISPKIFEDVQKSAYESFKNIVDI
                     ALQQDVDFVIIAGDLFDSENRTLRAEIFLKQQFERLQNEQIFVYVCHGNHDPLSSKIS
                     SNWPDNVSVFSNKVETYEAITKSGETIYIHGFSYENRASYENKIDEYPSSQGQKGIHI
                     GVLHGTYSKSSVNERYTEFILEDLNSKLYHYWALGHIHERQQLSDMPVINYSGNIQGR
                     HFNEQGEKGCLLIEGDHLKLKTKFYPTQYIRFEEATIETDKTSKQGLYEVIQNFKEQV
                     REEGKAFYRLTLVINSETLISPQDLLQVEEMITDYEENENQFVYIDELKIQYAQNDES
                     PLVNEFSAELLVDQTVFDKAMSDLYLNPRASKFLDDYGTFDHTALVNRAEEILKAEMR
                     GEQNDN"
     gene            7688..10624
                     /locus_tag="OY092_001791"
     CDS             7688..10624
                     /locus_tag="OY092_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCX1076732.1"
                     /translation="MIIKSLEIYGYGQFVQRKIEFNKNFTEIFGENEAGKSTIQAFIH
                     SILFGFPTKKSKEPRLEPRLGNQYGGKLVLILDDGLEIEVERIKGSAQGDVKVYLPNG
                     AVRDDAWLQKKLNYISKKTYQGIFSFDVLGLQDIHRNLNEKQLQDYLLQAGALGSTEF
                     TSMREVINRKKDELYKKSGKNPIINQQIEQLKQLESQIREEEAKLETYHRLVDDRDKS
                     SRRLENLKHNLNQLSKMHEEKQKEVALHDHSQEWKSLEQQLNIEPITFPEKGVDRYEK
                     ARAHKQSLERDIGLRNERLAQLKEEATQLEPVKQSDIDAFISLNQQENEIKNKEFELT
                     AIEKDIANKQRDKDELQANIGWSETHHDVDSSEAMKSYVSEQIKNKQEQAAYIKQLER
                     SLEGNKIEDNAVHSELDSVEKKIVPEETFEKKKEYSQQVIELNEKENLYSKLKERFEI
                     EQQEKQKRQKLLRTTFILLTLVGIGLTAFSFISNNMLFGIIFAVLTLVFVIGIIMSKS
                     KEVDYSEAITDEIEEIKAQLAILDENYDLDFDLDEQYRIRDHWQQALKNKDILEEKRQ
                     YIEGRLNDAKGRHDELQSTVENVKDELYLSSKISNDLIVDSISTMANIKALDQHISDL
                     NQQRQQLVQELDTFYNHAEAVTKSQFVYFNKLSLFHDVQQWLKSAEDTNEKWRINAEN
                     TKLVTNELNHLNAQLEENNKEITALFDFINVGTEEDFYQHHEDYQTYTSNLSRFNDLT
                     KYLENQNYSYELSSSLSEKTTAQLEEEDHLLATQVDEYNEQYLEMQAQVSDLSAQINH
                     METDTTLANLRHEYHSLKNQLNDIAKDWASLSYLQSLVDEHIKQIKDKRLPQVINEAV
                     EILKHLTDGRYTMINYNEDSITVKHVNGQLYDPVELSQSTKELLYVALRISLIKVLRP
                     YYPFPLIVDDAFVHFDKKRTEKMLNYLRSLSEHYQVLYFTCVKDNIVPSKEVITLNKI
                     EEGGKR"
     gene            10621..11562
                     /gene="yhaM"
                     /locus_tag="OY092_001792"
     CDS             10621..11562
                     /gene="yhaM"
                     /locus_tag="OY092_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HCX1076733.1"
                     /translation="MRNIENLNPGDSVDHFFLVHKATQGVTAQGKDYMTLHLQDKSGE
                     IEAKFWTATKNDMATIKPEEIVHVKGDIINYRGNKQMKVNQIRLATTEDQLKTEQFVD
                     GAPLSPAEIQEEISHYLLDIENANLQRITRHLLKKYQERFYTYPAASSHHHNFASGLS
                     YHVLTMLRIAKSICDIYPLLNKSLLYSGIILHDIGKVRELSGPVATSYTVEGNLLGHI
                     SIASDEVVEAARELNIEGEEIMLLRHMILSHHGKLEYGSPKLPYLKEAEILCYIDNID
                     ARMNMFEKAYKKTDKGQFTDKIFGLENRRFYNPESLD"
     gene            complement(11683..>12309)
                     /locus_tag="OY092_001793"
     CDS             complement(11683..>12309)
                     /locus_tag="OY092_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCX1076734.1"
                     /translation="KENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKVKSKKS
                     DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDK
                     DFEKALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLL
                     TDAYKDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ"
BASE COUNT         4580 a         1744 c         2091 g         3894 t
ORIGIN      
        1 aatataaaat aaagtttggg cattacaggt agatgtagtg ttcaagcttt atttttgtct
       61 atgtcaaatt gaacttataa gtctgatttg atatagagcc atgaaaagga aaaacttttc
      121 atggagtccg ttttattata gaacctattt tttatatgat gaattgttgt acatgtattg
      181 gccaaacaac ctgtgataaa aatcttatga tgtcatgtat tgtccataga tacacgtaac
      241 gcagttgaaa aagactacaa gtcattatcc aaggatgtta taaaatgaat aattactaaa
      301 atatcaaaat ataaaatctt aagcatcgta aaaaacaaaa aaaccgaaca tctgaaaaaa
      361 ttaataattt tccatctatc cgatttaagt tgatacttga tttagttaca atgcggtatt
      421 gcatgtttaa atatcatgca aaactaatca aattagtcat ccaaagaaac ggaaatgact
      481 tccttagtta agggatgcac aaactctatt ttgtaacttt caagttctaa ttgtcttaac
      541 gttgaatcac cgtataaagg atcaccaata actgggtgac caatttcagc taaatgcaca
      601 cgaatttgat gagtacgtcc agtatccaac ttgatttcaa gttggcacac agtttctttt
      661 atcatttttg aagttaaaat gtgtgtaatt gcacgctgtc cagtaggaga cacacgtcgt
      721 ttattcgaat ggaatttatc tttaccaatt ggcatatcaa tcgtttgtgg ttttaaaggt
      781 aaaagtgctt taacatttgc tttgtatatc cgcgtaatat cattgtcttc taacatgcga
      841 tcaagaattt ttttcattaa aggattttta gcaacaatta ataatcctac tgtttcctgg
      901 tccagtcgat gaattggttc gacataatcg ctatcaaccg tgtaaatcac atgattcatt
      961 aaagtattgc tttcttttaa atcattaggg tgggtcttaa cacctttagg tttcattacg
     1021 attgccatat catcgtcttc gtatttaatt tgtgcataac gataacttgg aacataatta
     1081 cttttttcat cggtggttgg gacaaataca tcgtcgccag tatgcacttt atccattaat
     1141 cgcgcaggtt tatcattaat agtaatatct ttagacatat ttaaatgatg taaatctttt
     1201 ttaggtacct taagttgttg gaaaatatct cgtaaactta agtcattaaa gttttctggt
     1261 attttaaatt tcataaaatc ctcctatagt ctttaatatc atatcacaaa tcagttctcc
     1321 gaaatataac tattaagtaa tcaaggccat tttatcatgt tcacgtctaa gatttaaaaa
     1381 tataataact caatgtataa tagttaatac acgtaaaaat gaattggagc gatttgatgg
     1441 aacaaaggac gcgactagct ttattaaaag agattgccga atttttaaac gaagaaactg
     1501 aaatgtatag catgacccaa ggtgcgttaa aatatttaat tgagggcagt aatttcacga
     1561 caggctggat atttttcatc aatagcgtag gtgaacatga acttgtatca catgtggctt
     1621 taccacaatc tttgacagca gaccactgtc actatattaa agatgggtct tgttggtgtg
     1681 tgaaagcatt taatcaaggt aggctaatga aagcgtcgaa tatcgtcaat tgttctcgta
     1741 ttaacttagc ctctaaagca tttcctagcc aaaatgacaa tattacacat catgcaacgg
     1801 taccacttaa atcgggtcaa gaacaattcg gcattttaaa tgtagcgtca ccaaatactg
     1861 aaatatatag tgatgaagat ttagagttgc tagagtctgt cgcatttcaa ttagggtcag
     1921 ccatcaaacg tatttattta acagaccgtg aaaaagaagc agcaaaaatt aatgaacgta
     1981 atcgtttagc tagagattta catgattcag taaatcaaat gttattttct gtaaaactaa
     2041 cagcacatgc tgcgtatggc gtgtcaaacg aatccatcgc taaacaagca ttcaagacga
     2101 ttgaggaaac gagtcaaaat gccgttaatg aaatgcgtgc attgatttgg caacttaagc
     2161 cagttggact tgagcaaggt ttaattcatg ctttgacagc atatagtaaa ttaatgcata
     2221 tacaattaaa tgtaaatgta gaaggtttaa tcgatttatc taatgaaatc gaagaaaaca
     2281 tatacagagc attacaagag tgtattaata atgttaagaa acatgctgat acgaataaaa
     2341 tggatcttac attaaaacaa atgaacgata tactatatat tgacgtgatt gattatggtc
     2401 aaggatttga gatcgataat gttcagatag cttcatcaca cggtataaat aacataaaac
     2461 aaagagttaa attattaaga ggtaaagtga cctttcattc tcagccaaca aagggtacac
     2521 aaatacaatt cacaattcct ataaaatagc ttgatttaag gagataaccc atgaacaaag
     2581 taatattagt agatgaccat tatattgtgc gacaaggatt gcgattttta ttatccacga
     2641 ttgaaaacat agaagtttta caagactttg cagatggaga aacattttta gaatatttaa
     2701 aagagcatga gcaccctgat attgtgctat tagatttagt gatgcctggc atgaatggta
     2761 ttgaaattac ggaatatatt aaggcacatt atccggatat aaaagttttg gtattaacaa
     2821 gttatgttga tgatgaacat gtaatttcag caatcaataa aggtgctgat ggttatgaaa
     2881 tgaaagacgt tgagcctcag caattaattg aaactattag acgagttatg aacggtgaaa
     2941 aaatgataca tcctaaggca caagatgtat tcgaaacagt tagccaaaaa ccacactaca
     3001 cgaataagtt gtcaaagaga gaaattgaag tgttacgtga aatggttaaa ggtaaaacaa
     3061 ataaagagat tgcagaaact ttatttgtat ctgaaaaaac aattaaaaca catgtcagtc
     3121 atatatttag taaattacaa gttagcgatc gtacacaagc agcaatttat gcaatggaaa
     3181 ataagttgat ttagaatgag cttttaaata tttgtcgaaa attagacaat ttttaatctg
     3241 attttgatga attttttata gcgatagggt ttattataca gttttctttg taaatttgat
     3301 atcattataa aagtgtaagt tttatcaaat ctagtgatta tgcataaaat tttacatcat
     3361 ttactttcgc ttcattataa agtaaactta acttttgttg acttgatcaa aatttaatac
     3421 aaatgtgaaa ttgactcttt tcattttatt aaaaatatat taagatgtaa tctgtgtttc
     3481 aagaaatgtg tattattgca atttcttgtg tccggataaa attccccaaa cagaaaggta
     3541 gataacagaa tggatagaca gagttttaca gatttaattc aaacaaaatt taaaatggtt
     3601 cgtatagagg ctggttatac gcaagatact atggcgcaaa caattggact ttctaaaaag
     3661 actttagtac aaatcgaaaa agagagagta ttaccaaact ggacaacttg tatttcaatt
     3721 tgtgcattat tcagagactc tgaagtatta aacagtacat ttggctgtga tccattagaa
     3781 atcgttcaaa caatttcaag aaatcactgt gcatatccaa accatgcacc aacaagtgat
     3841 atttattgga ataacattga gactcgtaat gggtacattt tacaaagtaa caaagtaagc
     3901 aatatttatc gtgtattaaa tccagataac caaccaattt tcggtacttc taaaatgaga
     3961 gaagctgaaa catactttaa cagaaatgct aaagaagaat tagtacatat ctaggcctat
     4021 atacttttaa taaataataa aagcgatgtg acacacctgt ttcgagaggt gaggcatcgc
     4081 tttttgtatg taaactaata ataaattgag cagaaagtga aatgattaat gaattaaaaa
     4141 ataaaaatag tggtataatg aataactatg ttgtcacaaa ggagtcaaaa ttatgaatgc
     4201 actatttatt atcatattta tgattgtagt aggggcgata attggtggca ttactaatgt
     4261 aattgcaatt agaatgctgt ttcacccctt taaaccatac tatatattta aatttagagt
     4321 cccatttaca ccaggtttaa taccgaaaag acgcgaagaa attgcaacta aaattggtca
     4381 agtgattgaa gagcatttgc ttacagaaac tttaattaat gaaaaattaa aaagcgagca
     4441 atcacagcaa gcaatagaat ctatgattca acaacagtta caaaagttga cgaaagatca
     4501 attgtcaata aaacaaatta cttctcaact cgatattgat ttagaacaag tattacaaac
     4561 taatggaaat caatatattg aatcacaatt gaataattat tatacaaagc atcaaaacca
     4621 aacaatagca tctttattgc caaatcaact tgtaacattt ttagatcagc atgtagataa
     4681 cgcaacagac ttattatgtg atcgtgcaag aaattattta tcatctgcaa aaggcacaca
     4741 agatattaac gatatgttgg atactttttt taatgagaaa ggtaagttaa ttggtatgtt
     4801 gcaaatgttt atgacaaaag agagcattgc agatcgaatt caacaagaac ttatacgttt
     4861 aacatctcac cctaaagcaa gaacaattgt gacatcgtta attaccaatg aatatcaaac
     4921 ttttaaagat aaaccattga atgaactgtt agatgcggcg cagtttaatg aaatcgctga
     4981 aaatctatca gtgtatgtaa caacatatgc tagcaaacaa gcgaataagc cagtggttac
     5041 gttaatgcct caattcgttg attatttaga aggtcaactc tctagcaaat tagcaaattt
     5101 aatcattgaa caattatcga ttcacttatc tacaattatg aaaaaagtgg atttacgagg
     5161 attaattgaa gaacaaatta atacgtttga cttagattat attgaaaaat taattattga
     5221 aattgctaac aaagaactaa agttgattat gtcattaggt ttcattttag gtggtattat
     5281 tggatttttc caaggtttgg ttgcaatctt tgtctaaaaa agcgagatgt ggtaaagtaa
     5341 tatcgaacgt tttaataaac atcacaacaa aggagtgcta taaccatggc agtaaattta
     5401 tatgattatg caaatcaatt agaacaagct ttaagagaaa gcgaagaata caaagcaatc
     5461 aaagaagcat tcgctaatgt aaaagctaac gaagaatcta aaaagttatt cgacgagttc
     5521 cgtgaaactc aaattaactt ccaacaaaaa caaatgcaag gtgaagaaat tgctgaagaa
     5581 gatttacaaa aagcgcaaga acaagcgcaa gcaattgaaa aagatgaaaa catctctgca
     5641 ttaatgaatg ctgaacaaaa aatgagtcaa gtattccaag aaatcaacca aattatcgtt
     5701 aaaccattag acgaaattta cgctgactaa tattaaaata atatttttca atcctttaaa
     5761 tagaggaata gactgccgac agagtccgag actttgtggg tagttttttt agttttgata
     5821 acggaagtta gaggctctct gtcaaattgg gcagatgcgt tcagtatcgg aatttaggct
     5881 agtaaacgtg tcctaacttc ctttttgcat tttggagttt aaagttttca acataatact
     5941 attagttcgg tcatgtatcg gactgatgaa aaagtgtttc acttttaatg actcattaag
     6001 aacggcctga aaatgtttga cgtattaagt gcaatgatag ttttgacatt tagcttctaa
     6061 ttggtcatta ctgccgagca gaactagtag agtaatcatg taaatcttta atgtatcagt
     6121 tggttcacca gcagagttaa cagctacaga aattgaattt ccgactgaaa tttttgaaaa
     6181 aaatcaacgc acgctacaaa taaaatttta aactgttata aatgtgtctc aatttcatat
     6241 gttcatcgac gatatgaagc gtattatggt aaaatgaaga aataataaac ttgttaataa
     6301 ataaaacatc acgatttgac taaagcactt tattattgtg tagataatag ttttttaacg
     6361 aaataaaaat ggcgactggt tttaataaat cagctaatga atcactacac ctataagtat
     6421 gaatatagtg attagaatgc tttgtatagt tggattttgc aaaattgatg ttagaacctt
     6481 taattaagga gatatggatg tatggttaaa tttattcatt gttcggattt acatttagat
     6541 agtcctttca aatctaagag tcatataagc cctaaaattt ttgaggatgt tcaaaaaagt
     6601 gcttatgaaa gttttaaaaa tattgtagat attgcattac aacaagatgt tgattttgta
     6661 attatcgcgg gtgatttatt tgatagtgaa aacagaacat tacgtgctga aattttctta
     6721 aaacagcaat ttgaacgttt acaaaatgaa caaatctttg tttatgtttg tcatggtaat
     6781 cacgaccctt tatcatcaaa gatttcatca aactggccag ataatgtttc tgtattttca
     6841 aataaagttg agacgtatga agcaattact aaatcgggtg aaacaattta tattcacgga
     6901 tttagttatg aaaatagagc aagttatgag aacaagattg atgaatatcc atcaagtcaa
     6961 ggccaaaaag gcatacatat tggtgtcttg catggtacgt acagtaaatc ttcagttaac
     7021 gaaagatata ccgagttcat tttagaagat ttaaacagta aattgtatca ttattgggct
     7081 ttaggtcata tacatgaacg tcaacaatta agtgatatgc ctgtaattaa ctattcaggt
     7141 aatattcaag gtagacattt taatgagcaa ggtgaaaaag gttgcttatt aatcgagggt
     7201 gaccacttaa aattaaaaac taaattttat cctacacagt atattagatt tgaagaagca
     7261 actattgaaa cggataagac atctaagcaa ggtttatacg aggtcattca aaactttaaa
     7321 gaacaagtga gagaagaagg aaaagccttt tatcgtttaa cgcttgttat taatagtgag
     7381 acattaattt cacctcaaga tttattacaa gttgaagaaa tgattacaga ttatgaagaa
     7441 aacgaaaatc aatttgtata tattgatgag ttaaaaatac aatatgcaca aaatgatgag
     7501 tcacctttag ttaatgaatt ttcagcggaa ttattagtcg atcaaactgt ttttgataaa
     7561 gcgatgtcag atttatattt aaatccaagg gcatctaagt tcctagacga ttatggaaca
     7621 ttcgaccata cagcattagt taatcgtgct gaagaaatat taaaagctga aatgagaggt
     7681 gaacaaaatg ataattaaat cacttgaaat ttatggttac ggtcaatttg ttcaacgtaa
     7741 aattgaattt aataaaaact tcactgaaat ttttggtgaa aatgaagcgg gtaaatcgac
     7801 gattcaagca tttatccatt cgatattatt tggttttcca actaaaaagt ctaaagagcc
     7861 aagactagaa ccacgtctag gtaaccaata cggtggtaaa ttagtactta ttcttgatga
     7921 tggcttagag attgaagttg aacgaattaa aggcagtgct caaggtgatg tgaaagtata
     7981 tttacctaat ggtgctgtgc gtgatgatgc ttggttacaa aagaaactta attatatttc
     8041 taaaaagaca tatcaaggta tcttttcatt tgatgtacta gggcttcaag atattcatag
     8101 aaatctaaat gaaaaacaat tgcaagatta tttattacaa gcaggggctt taggatcaac
     8161 tgaattcacg tcaatgcgcg aagtgattaa tcgtaaaaaa gatgaattat ataaaaaatc
     8221 aggtaaaaat ccgatcatta atcaacaaat tgagcaatta aaacaactag aaagtcaaat
     8281 tcgtgaagaa gaagctaagc tagaaacata tcatcgctta gtagatgatc gtgataaatc
     8341 atcacgtcga ttagagaatt taaaacataa tttaaatcaa ttatcaaaaa tgcatgaaga
     8401 aaaacaaaaa gaggttgctt tacatgatca ttcacaagaa tggaagtctc tagaacaaca
     8461 gttaaatatt gagccaatca cattcccaga aaaaggtgta gatcgttacg aaaaagcacg
     8521 agcgcataag caatcgttag aaagagatat tggtttaaga aatgagcgtt tagcccaact
     8581 taaagaagaa gcgactcaat tagagccagt taaacaatct gatattgacg ccttcattag
     8641 tttgaatcaa caagaaaatg aaattaaaaa taaagaattt gaacttactg caatcgaaaa
     8701 ggatattgcg aataaacaac gtgataaaga tgaattgcaa gcaaatattg gttggtctga
     8761 aacgcatcat gacgtagata gctctgaggc aatgaaaagt tatgtcagtg agcaaatcaa
     8821 gaataaacaa gaacaagcgg catacattaa acaattagaa cgtagtttag aaggaaataa
     8881 aatcgaagat aatgcggttc atagcgaact agattctgtt gaaaaaaaaa tagttcctga
     8941 agagactttt gaaaagaaaa aagaatactc acaacaagtc attgaattaa acgaaaaaga
     9001 gaacttgtat agcaaattga aagaacgttt cgaaattgag caacaagaaa aacaaaaacg
     9061 tcaaaaattg ttacgaacaa cgtttattct tttaacacta gtaggtattg gtttaactgc
     9121 cttctcattt atttcaaaca acatgttgtt tggtattatt ttcgcagtat taactttagt
     9181 atttgttatc ggtatcatca tgtctaaatc aaaagaagta gattatagcg aggccatcac
     9241 agatgaaatc gaagaaatta aagcacaact agccatttta gatgaaaatt atgacttaga
     9301 ttttgatctt gatgagcaat atcgcattcg tgatcactgg caacaagctt tgaaaaataa
     9361 agatatttta gaagagaaac gtcagtatat tgaaggtcgt ttaaatgatg cgaaagggcg
     9421 tcatgatgaa ttacaatcaa cagttgaaaa cgttaaggat gaattatact tatcatctaa
     9481 aatttcaaat gatttaattg ttgatagtat ttctacaatg gcgaatatta aagcattaga
     9541 tcaacatatc agtgatttaa atcaacaacg ccagcaattg gttcaagaat tagatacatt
     9601 ctacaatcat gctgaagctg ttacaaaatc acaatttgtt tatttcaaca aattatcttt
     9661 attccacgat gtgcaacaat ggttgaaatc agctgaagac acgaatgaaa aatggcgtat
     9721 taatgctgaa aataccaaac ttgttacaaa tgaattaaat catttaaatg ctcaattaga
     9781 agaaaataat aaagaaatta cagcactatt cgattttatc aatgttggta ctgaagaaga
     9841 tttttaccaa catcatgaag attaccaaac ttacactagt aatttgagtc gttttaatga
     9901 tttaactaaa tatcttgaga accaaaacta ttcttatgaa ttaagttcta gtttaagtga
     9961 aaaaacaact gcacaacttg aagaagaaga tcatttattg gctactcaag ttgacgaata
    10021 taatgagcaa tatcttgaaa tgcaagcaca agtcagtgat ttaagtgcac aaatcaatca
    10081 catggaaact gatacaacgc ttgctaattt gagacatgaa tatcacagtc ttaaaaatca
    10141 acttaatgat atcgcaaaag attgggcaag tttaagttat ttacaaagtt tagttgatga
    10201 acacattaaa caaattaaag ataaacgttt gcctcaagtt attaatgaag cggtagaaat
    10261 attgaagcat ttaacagatg gcagatatac gatgattaac tataatgaag attcaattac
    10321 ggttaaacat gttaatggtc aattatatga tcctgttgaa ctaagtcaat ctacaaaaga
    10381 attactttat gtagctttac gtatcagttt aattaaggta ctacgaccat attatccgtt
    10441 cccattaatt gttgatgatg catttgttca ttttgataaa aaacgtactg aaaaaatgtt
    10501 gaattattta cgatcattat cagaacacta tcaagtacta tactttacat gtgtaaaaga
    10561 taatattgtt ccatcaaaag aagtgattac attaaacaaa atagaggaag gcgggaaacg
    10621 atgagaaata tagagaatct aaatcccgga gattcagttg atcacttttt cttagtgcat
    10681 aaagctacac agggtgtaac agcacaaggt aaagattata tgacattaca tttgcaagat
    10741 aaaagtggtg aaattgaagc gaaattttgg acggctacaa aaaatgatat ggcaacaatc
    10801 aagcctgaag aaattgtaca tgttaaaggt gacatcataa actatcgcgg aaataaacag
    10861 atgaaagtca accaaattag actagcgaca actgaagatc aattaaaaac agaacaattt
    10921 gtagatggtg cacctttatc accggcagaa atacaagaag agatttctca ttatttgcta
    10981 gatattgaaa atgctaattt acaacgtatt acacgtcatt tattgaaaaa atatcaagaa
    11041 cgattttaca catatccagc tgctagttct catcatcata actttgcgag tggcttaagc
    11101 tatcatgtat taacgatgtt acgtattgca aaatcaattt gtgacattta tccattgtta
    11161 aacaaaagtt tgttatatag tggtattatt ttgcatgata ttggtaaagt cagagaatta
    11221 agtggtcctg ttgcgacgtc gtatacagtc gaaggtaact tattaggaca catctcgatt
    11281 gcgagtgatg aagtagttga agcagctcgt gaattgaaca ttgaaggaga agaaatcatg
    11341 ttgttaaggc atatgatttt atctcatcat ggtaagttag agtatggttc gccaaaactg
    11401 ccatacttaa aagaagcaga aattttatgc tatatcgata atatcgatgc tagaatgaat
    11461 atgtttgaaa aagcatataa aaaaactgac aagggtcagt ttacagataa aatatttggt
    11521 cttgaaaatc gtagattcta caatcctgaa tcacttgatt aagaactaaa agatatcgga
    11581 cagatgagta tactgaaaca tgagctcatc tgtccgattt ttaatgcgaa aaaaccgagc
    11641 ggccgtggta tgatttttga accacggtcg ctcggttttg tgttattggc tcatgccgga
    11701 ttgtccgcct tgtgcgccac cttgtttaag tttttcaggg tttaagattt tatcttcgac
    11761 aactgattta atatcacgat ctttaaagtc aacatcgtat tcttttaata gatctttgta
    11821 tgcatcagtt aataattttg gatttttttg tactttctga tcgactaatt tttcttttag
    11881 gctttgtttt tcactgttaa agtctgttgg tttatcagct ttaataatat gatatccaaa
    11941 acttgattta acaacgtctg atacttcacc atctttaagt ttaaatagtg ctttttcaaa
    12001 atctttatca gtttgtcctt taagaacata acctaattcg ccatcttttt tagctgaacc
    12061 agtatccatt gattcttttt tagcgatttc accaaattta cttggatctt ttgaaacttc
    12121 tttttgaatt tcttcagctt tttgtttcgc ttctttatca tctaagcctt ctttgtcgct
    12181 tttcttagat ttaactttaa ttaaaatgtg tgaagctttc ttgctgtctt ctttaatttc
    12241 agaatcagag attttaattt tatctgatag taattcttta tgataagcag cagtacgtaa
    12301 attttcttt
//
LOCUS       DAKPJH010000073        12001 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.073, whole genome shotgun sequence.
ACCESSION   DAKPJH010000073 DAKPJH010000000
VERSION     DAKPJH010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12001
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.073"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..359)
                     /locus_tag="OY092_001794"
     CDS             complement(<1..359)
                     /locus_tag="OY092_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000693615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076735.1"
                     /translation="MKIKFKKEMTLDELIKWAWENPELVRGEKFYAQGKSNETYVYFH
                     LYDGRKCILREYISADDTFEVEYEEEITEETVIPKLVKMYKDGKMSVYNDYSIKRSLL
                     YSPKAYYILNDDLTMTL"
     gene            complement(373..615)
                     /locus_tag="OY092_001795"
     CDS             complement(373..615)
                     /locus_tag="OY092_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phi PVL orf 51-like protein"
                     /protein_id="HCX1076736.1"
                     /translation="MTDNARKEYLNQFFGSKRYLYQDNERVAHIHVVNGTYYFHGHIV
                     PGWQGVKKMFDTAEELETYIKQHGLEYEEQKQLTLF"
     gene            complement(619..987)
                     /locus_tag="OY092_001796"
     CDS             complement(619..987)
                     /locus_tag="OY092_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076737.1"
                     /translation="MARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRVKDGWE
                     LHEAMDAPEGTRLSEYREKKTIERLEQARLERKLERKQKKEAELRRKKPHLFNVPQKH
                     PRGRYACYLMENDIFVKVKK"
     gene            complement(1000..1404)
                     /locus_tag="OY092_001797"
     CDS             complement(1000..1404)
                     /locus_tag="OY092_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000401967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HCX1076738.1"
                     /translation="MEIEIKFNEVFNAPMGSPRPRFRKTGRFVQTYMPTSYTKHKAYI
                     QGQMPKLNLERALKIELDFYFPLLKSWSKKKKSEMVGQYKVTNPDIDNLIKTVLDACN
                     GHVWKDDNQITEITSSKRYGIEPKIIIRIEEI"
     gene            complement(1413..1631)
                     /locus_tag="OY092_001798"
     CDS             complement(1413..1631)
                     /locus_tag="OY092_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000338527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076739.1"
                     /translation="MDAFDKYYLFDHDGNKMFSVTPHFKDGRHLVVGIKETKFNGRRW
                     YLDDYELNTLIDNEQMELGHQTSLFEYI"
     gene            complement(1638..2522)
                     /locus_tag="OY092_001799"
     CDS             complement(1638..2522)
                     /locus_tag="OY092_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HCX1076740.1"
                     /translation="MTGWIKLHRKLLDSPIFQNEKLFKVFAYCLMKASHKDHTQLVGR
                     RVVELEKGQFVFGRKRASEELRLKESTVRDYIKLLENLGTIVVKSDNKFSVITVVNWA
                     IYQSMEENSDSKNDNKSTTNGQQINNKSTTNGQQINTNKNVKNGDNVKNDENEKKKAA
                     AFDFFQDNGFGFITPYNLDDLNYYLDSFENDSDQIVTASLKIAKDRNKVTWGYAKSIL
                     NTWLNANLKSIEQIRAFEKQQLESKKQTNKPYVKPSKEKTPKWLTDSTRETKTPEVDE
                     NLEKDREAFIKRLNSKWE"
     gene            complement(2552..3022)
                     /gene="ssb"
                     /locus_tag="OY092_001800"
     CDS             complement(2552..3022)
                     /gene="ssb"
                     /locus_tag="OY092_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1076741.1"
                     /translation="MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGER
                     EADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQF
                     LEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF"
     gene            complement(3023..3592)
                     /locus_tag="OY092_001801"
     CDS             complement(3023..3592)
                     /locus_tag="OY092_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000123904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCX1076742.1"
                     /translation="MAGCLITHEHGDHAKYTKQFVDNGVISYMTAGTQQAMNFESHRL
                     CTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVLYVTDTKYLKYKFNGIT
                     HMMLEVNYIYEQMQENIKNGSVHSTLANRIMESHFSLEHAIGMLKANDLTRLEEIHLI
                     HLSSQNSNAKYIKSEIQKVTGVPVYVGGL"
     gene            complement(3721..4641)
                     /locus_tag="OY092_001802"
     CDS             complement(3721..4641)
                     /locus_tag="OY092_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HCX1076743.1"
                     /translation="MTENNKLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYS
                     PSNAMKQAWLQISQDNKLMSCNDTSKANALLDMVTQGLNPAKNQCYFIPYGNKMQLQR
                     SYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGGTGRIKAIKHEQDFFNIDKENIIG
                     AYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVI
                     NRAAKRYINTSTDSNLFKYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYT
                     ELENDKPIDVSDFEEIKEPATEKESEEEPF"
     gene            complement(4643..6586)
                     /locus_tag="OY092_001803"
     CDS             complement(4643..6586)
                     /locus_tag="OY092_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000700558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCX1076744.1"
                     /translation="MKINKLTISNFAGIKEESFNFNGKDAKIYGNNATGKTTTATALQ
                     WLLFDKGLDGSTKSFNPVSLNEKNEENYELIPTVFAEFEIDGKITTFKKESHPKYTIN
                     QKTNRKEYSRSRTKKQYINDESIKVKDYKARIDELIDEDVFKLITNPQAFNLLDWKKR
                     RSLLFEIAKPINDEDVIKTNDDFKELNNILGDHEIETKKKILTDKIKQINKDIKDIPI
                     RINQTQQNKQDVPEFDNDRYAIIKQEIEQLENERIDIQNGKEEINLRNQLADKQSELK
                     RIEDNNSASNENKIHALTNELHVENGTVANLKTRLKQNKQQITHEENRRNQLLENHKG
                     LKSDLEKAKNQKFEYLDDNVCSCCGQQLPAEQVNEAREKALQKFNAGKSKELETIQTS
                     INHIISEGKKIKPIIEKLEDDNNNLQIKINEAEERSARIQNKINKLKTTHVDVTQTDE
                     YKAVMLEINEINQKRSNIRKTIQDNVSGIDDKISELTQEKSEIEVSRSIEKSNKHLDD
                     VISELRNEEDRLLDEKEKYSHDLYILKEFTTTKVKMLTENINNEFEIAEFKLFNTLVN
                     GELEETCSTTVNGVEYDSGLNNASRINVGLDIINTLSKHFKVTAPIFIDNAESVTELI
                     KTESQQIQLIVNEQDKKLRMETI"
     gene            complement(6595..6858)
                     /locus_tag="OY092_001804"
     CDS             complement(6595..6858)
                     /locus_tag="OY092_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001638663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076745.1"
                     /translation="MRDTERNILNIFKTLFDEYTLSNQRALLEIERNHHGYLSINFLH
                     YHDSYKTNNKLVQIHEINPDSHERIKNLIIEVLRGHRKIKKGA"
     gene            complement(6867..7127)
                     /locus_tag="OY092_001805"
     CDS             complement(6867..7127)
                     /locus_tag="OY092_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HCX1076746.1"
                     /translation="MYYKIGDVCQKVINVDGFDFKLAVKKQDYSILVNVLDLEDRFID
                     GINITDENDLYTALDILNQSIYEWIEENTDERDRLINLVMRW"
     gene            complement(7220..7381)
                     /locus_tag="OY092_001806"
     CDS             complement(7220..7381)
                     /locus_tag="OY092_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1270 domain-containing protein"
                     /protein_id="HCX1076747.1"
                     /translation="MSNIYKSYLLAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFI
                     FYKEYFYEE"
     gene            complement(7378..7698)
                     /locus_tag="OY092_001807"
     CDS             complement(7378..7698)
                     /locus_tag="OY092_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF771 domain-containing protein"
                     /protein_id="HCX1076748.1"
                     /translation="MPHVLNVTVPIPETHVLITKDEYEELIAYSLDPVWNMSDLKKKL
                     KIASDETIKDRLLFHPRFEKELRAQGIVHYPDENFNRWRFNARKMNKFVDEHFNEIYK
                     ERIK"
     gene            complement(7774..7911)
                     /locus_tag="OY092_001808"
     CDS             complement(7774..7911)
                     /locus_tag="OY092_001808"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076749.1"
                     /translation="MFKILNDIKTSLKNHPWGWKEHLPYLLMLTLSLVALIFGVLSAI
                     L"
     gene            complement(7931..8191)
                     /locus_tag="OY092_001809"
     CDS             complement(7931..8191)
                     /locus_tag="OY092_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1076750.1"
                     /translation="MEQITLTKEECVEQCINKDLKLLDYRVQQILEGVLSESTTYGDA
                     RNKLETLKIIAESHFKTEHASVIYKLALKKLDKKINATPIKE"
     gene            complement(8204..8953)
                     /locus_tag="OY092_001810"
     CDS             complement(8204..8953)
                     /locus_tag="OY092_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HCX1076751.1"
                     /translation="MQALQTKSNIGEMFNIQEKENGEIAISARELYKALEVKKRFSAW
                     AEINLKHFKENRDFTSVLTSTVVNNGAVRQLEDYALTLDVAKHVAMMSGTEKGFDFRE
                     YFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGE
                     LAKIIKQNGVNIGQRRLFEWLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHS
                     DGHTSISKTPKVTGKGQQYFVNKFLGEKQTS"
     gene            9010..9219
                     /locus_tag="OY092_001811"
     CDS             9010..9219
                     /locus_tag="OY092_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000772138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076752.1"
                     /translation="MKLLVTLKDGSKKHVSDLKKIVFPGYEGIETVTKEEIETFFLDP
                     TKTYVFVGSQTLSVEAGQILTVEFS"
     gene            complement(9212..9352)
                     /locus_tag="OY092_001812"
     CDS             complement(9212..9352)
                     /locus_tag="OY092_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076753.1"
                     /translation="MLQKFRIAKEKNKLKLKLLKHASYCLERNNNPELLRAVAELLKK
                     VS"
     gene            complement(9367..9813)
                     /locus_tag="OY092_001813"
     CDS             complement(9367..9813)
                     /locus_tag="OY092_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076754.1"
                     /translation="MEQITLTKEELKEIIAKEVREAINGKKPISSGSIFNKVRISHND
                     FDEINKKFAYTERLRGADNLGLGHPLSLKKYQHGIGCYENYKAYASEIHDHIRKLTLS
                     AFGVTLNSDLKESEYGEASRMYDMLKNFYLYRYQKRIETLSIEDFE"
     gene            complement(9826..10068)
                     /locus_tag="OY092_001814"
     CDS             complement(9826..10068)
                     /locus_tag="OY092_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000639923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF739 family protein"
                     /protein_id="HCX1076755.1"
                     /translation="MIYNFDYSLLYERMAEYRYSQSSLANAIPISRTSINHKLQGKNL
                     FTQWEIKRICELLEIPPTKVGRYFFEQNVQKPVQMS"
     gene            10232..10948
                     /locus_tag="OY092_001815"
     CDS             10232..10948
                     /locus_tag="OY092_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001083977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076756.1"
                     /translation="MNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAK
                     QDKVFELAKALNVNEAWLMGFDISKNRKIENNDITSIYSKLTPPRQSNVLKYATNQLE
                     EQNNDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALK
                     VNGDSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKK
                     YKDLYFYDNESVRLVGKVIL"
     gene            10960..11814
                     /locus_tag="OY092_001816"
     CDS             10960..11814
                     /locus_tag="OY092_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001620117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HCX1076757.1"
                     /translation="MKPRKQDEKILSDQYSYFEPIISDSCDIKFDENKRRMGSIFISH
                     EEICFIRKEEDYIFKISLSEVIDYNTVVTIWKNQAFLTLNDNRKLTVYFVTNSPLTGF
                     ISILKTYMQLSKNKETIISNDCLPINDDEQTKVEIFDVVGLNYEGRRKELKKLIKKMK
                     NNDDFFFLYSDLKGNELKEELLYEDKVYEISDYEVIPGVFLQKEPDNPYDENAIKVMI
                     SNEYSEFHVGYVPREYASRLVNHMDNIVSCNAYINGGKYKTLDYLEEKIVTKESDYGL
                     RVHLEYKV"
BASE COUNT         3357 a         2079 c         1858 g         4707 t
ORIGIN      
        1 attaacgtca tagttaggtc gtcgtttaag atatagtatg ctttagggga ataaagcaaa
       61 gaacgcttaa tcgaatagtc attgtaaacg gacatttttc cgtctttgta catttttact
      121 aacttcggta ttacagtttc ttccgtgatt tcctcttcat attcgacttc aaaagtgtca
      181 tcggctgata tatattctct taagatgcac tttcttccgt cgtaaagatg gaaatacaca
      241 tatgtttcat tactcttgcc ttgcgcataa aatttctctc ctcttactaa ttcagggttc
      301 tcccatgccc acttaattaa ttcatctaat gtcatttctt ttttaaattt gattttcatt
      361 tttatatctc ctctaaaata aagttagttg cttctgttcc tcgtattcca aaccatgttg
      421 ctttatatat gtttcgagct cttctgctgt atcaaacatc tttttaacgc cttgccaacc
      481 tggtacgata tgcccatgaa agtaataagt gccgtttact acatgaatat gtgccactcg
      541 ttcgttatcc tgatacagat atctcttaga tccaaagaat tgatttaggt attctttgcg
      601 tgcgttatct gtcatgatct acttcttaac tttcacgaat atgtcgtttt ccatcaggta
      661 gcacgcataa cgtcctcttg gatgtttctg tggtacatta aacaaatgtg gcttctttct
      721 tcttagctca gcctctttct tttgctttct ttccaatttg cgttcgagtc tagcttgttc
      781 cagtctttct attgttttct tttctctgta ctcgcttaaa cgcgtacctt ctggtgcgtc
      841 cattgcttca tgtagttccc aaccgtcttt tactctctta gaaaccattc cagcggttat
      901 accgtgactt tctattaatt ccatttcaaa tttactgaac ctataaggtt tatcgtttat
      961 tgttacaatt cttgcttttc tcgccatttt atccacctct tatatttctt ctattcgtat
     1021 gattattttg ggctcaattc cataacgctt tgagctagtt atttctgtaa tttggttatc
     1081 gtctttccat acatggccat tacaagcatc taataccgtt ttaattaagt tgtcgatatc
     1141 cggattagtc actttatact gcccaaccat ttcgcttttc tttttcttcg accacgattt
     1201 aagcaatgga aagtaaaagt ctaattcgat ttttagtgcg cgctctagat ttaacttagg
     1261 catttgccct tgtatatacg ctttatgctt tgtgtaagac gttggcatgt aagtttgaac
     1321 aaatctacct gttttacgaa agcgtggacg gggcgacccc atcggcgcat taaacacttc
     1381 attaaattta atttctatct ccatgtaatc cctcatatat attcaaataa gcttgtttgg
     1441 tgtcctaact ccatttgttc attatcaata agtgtattta attcataatc gtctaaatac
     1501 caacgacgac cattaaattt tgtttctttt attccaacaa ctaaatgccg accatcttta
     1561 aaatgtggtg taactgaaaa cattttgttg ccgtcatgat caaatagata gtatttatca
     1621 aatgcatcca ttttcaatca ctcccatttg ctatttagac gcttaataaa agcttctctg
     1681 tctttctcaa ggttttcatc tacttccggc gttttcgttt ctctcgtgct gtctgtgagc
     1741 catttgggtg ttttttcttt cgatggttta acataaggtt tattagtttg ctttttgctt
     1801 tccagttgtt gcttttcaaa tgcacgtatt tgttcaatag atttcaagtt tgcattaagc
     1861 catgtattca aaatgctttt agcatatccc caagtaactt tatttctgtc tttagcgatt
     1921 ttaagtgatg cggtaactat ttgatctgaa tcattttcaa atgaatcaag ataataattt
     1981 aaatcgtcta aattgtaagg agttatgaaa ccgaatccgt tatcttggaa gaaatcgaag
     2041 gcagctgcct tcttcttctc attctcatca ttctttacat tatccccatt ctttacattc
     2101 ttgtttgtgt tgatttgttg tccatttgtt gttgatttgt tgttgatttg ttgtccattt
     2161 gttgttgatt tgttgtcgtt tttgctgtcg gaattttctt ccatactttg ataaatcgcc
     2221 caattgacaa cggttataac agaaaatttg ttgtcggact ttacgacgat agttccaaga
     2281 ttttctaaaa gctttatgta gtctcttact gtggattctt tgagacgtaa ctcttcgctt
     2341 gctcgctttc tcccgaacac aaattgacct ttttctaatt cgacaacccg cctgccaaca
     2401 agctgtgtat gatccttatg actagctttc ataagacaat atgcaaatac tttgaataac
     2461 ttttcgttct gaaaaatagg cgaatctaat aattttctat gaagttttat ccaaccagtc
     2521 atatacacac ctcactttca aaccggttaa attagaatgg taaatcattg tcatctattt
     2581 caatcggacc atttgcattc gcaaacggat tatcttttac tggtttgtta tttgaatatt
     2641 gcgattgtcc acgtgtttgt tgtacttgtt gttggtataa atcttgttga gtgtcatttg
     2701 agtttttcgg ttctaaaaac tgaatactat cagcaataac ttccgtaaca tatacacgtt
     2761 gaccttcctt gttttcatag ttacgcgttt gtaatctgcc atctacgccc gccaacgatc
     2821 ctttagatag gtatttatta acgttctctg cttgtttttt aaatacgatg atattaataa
     2881 agtctgcctc gcgctctcct tgtgcatttg taaatgtacg gttaactgct aatgtgaatg
     2941 atgctacatt tacaccactt tgagtggttc ttaattctgg gtctctagtt aaacgaccaa
     3001 ctaatattgt tctgtttatc atttataaac ctccaacata aacgggcacg cccgtcactt
     3061 tttgtatttc acttttaatg tattttgcat ttgaattttg gctacttaaa tgaattaaat
     3121 gtatttcttc gagtctagtt aaatcatttg cttttaacat tccgatagca tgttctaagc
     3181 taaaatgaga ctccataatt ctgtttgcta atgtgctgtg cacactgccg ttttttatgt
     3241 tttcctgcat ttgttcatag atataattaa cttctaacat catgtgcgta atgccgttaa
     3301 atttgtattt caaatacttt gtatcagtaa catacagaac cttataacct aatgtacttt
     3361 gtaataagaa agccacaggc tcgttagcat catgttcgat gtcaaacggt agaattgacc
     3421 atgtgcctat tcgcagctct tgctttgcct taatcgtgca taagcgatga ctttcaaaat
     3481 tcatagcttg ttgtgttcca gcagtcatat agctgattac accattgtcg acaaactgct
     3541 ttgtgtactt tgcatgatca ccatgttcgt gtgtgataag acaccctgct atatgtcttg
     3601 ttttatattt aaaatgcttt tgaacacgtt caaattttat acctgactca agtagtaacg
     3661 tagtacgtcc atcatttaag acgtagcagt taccacttga accagttgct attgtttcaa
     3721 ttaaaatggc tcttcttcgc tttctttttc tgttgcaggt tcttttattt cttcaaagtc
     3781 agatacatca ataggcttat cattttctaa ttctgtgtat tgtgcttctt cgagaactgg
     3841 ttgttcaaag tccaattgtt cttgatttgc attttcttca acttctgcgt ccaacacttc
     3901 tttgcgttga cgttgttcgg attcttgtgc gtatttgaaa agattgctat ctgttgatgt
     3961 gttgatataa cgtttagcag ctctattgat aactgttttt ttagccattt cttctttgaa
     4021 attattatgt gttttagaat tttgtaatgc tttttcatct ttaatcattg atgactgcat
     4081 ccatgcttgt ttaatttgtt caatagtcat gacttcaata tagttatctc gtccatcatt
     4141 aaatacgatt gtgcagtacg caccgataat gttttctttg tcgatgttaa agaagtcttg
     4201 ttcgtgttta atcgctttga tacgtcctgt tcctcccatt tcttgcttga atgtatcgcc
     4261 tttataaatc acttgagcaa caacatcttg agcacctgca tcacgtttta acatcattac
     4321 attaccgtga tagctacgtt gtaactgcat tttgttgccg taaggaataa agtagcattg
     4381 atttttagct ggatttaaac cttgcgttac catgtctaat aaggcatttg ctttgcttgt
     4441 atcgttacaa ctcattaatt tgttatcttg gctgatttgt aaccatgctt gtttcatggc
     4501 attacttggt gaataatcat ttggcaattc caaattgcct tgtgactcta aaactctcac
     4561 tttgtttaat acgttgtcag atacgttctt ttcttgtact aattgttgtt caatagtttg
     4621 taatttatta ttttcagtca ttttatatag tctccattct taatttttta tcttgttcat
     4681 ttactatcaa ttgaatttgt tgtgattctg ttttgataag ctctgttact gattcagcat
     4741 tatcaataaa tattggcgct gtaactttaa aatgttttga cagtgtattg atgatatcta
     4801 agccaacatt aattcttgag gcgttattta aaccgctgtc gtattcgacg ccgttaaccg
     4861 ttgtggaaca tgtttcttct aattcgccgt taactaaggt attgaataac ttaaattcag
     4921 caatctcaaa ttcattattg atattttcag taagcatttt gacttttgtt gttgtaaatt
     4981 cttttaagat ataaaggtca tgtgaatact tttctttttc atccaataat ctatcttctt
     5041 catttcttaa ttcagaaata acatcatcta gatgtttatt tgatttttcg attgatcttg
     5101 acacttcaat ttctgatttt tcttgagtaa gttcgcttat tttgtcatct attcctgaaa
     5161 cgttatcttg aatagttttc ctaatgttcg agcgtttttg attaatctcg tttatctcta
     5221 acattactgc tttgtattcg tcagtttgtg taacgtcaac atgagtcgtt ttcaacttat
     5281 taattttgtt ttgtattctt gctgaacgct cttctgcttc gttgatttta atttgaagat
     5341 tattattgtc atcctctaac ttctcgatga ttggctttat tttcttgcct tctgaaataa
     5401 tgtgattgat agatgtttgt attgtttcta attctttcga tttgccagca ttgaatttct
     5461 gcaatgcttt ttctcttgcc tcattcactt gttcagctgg taactgttga ccacaacaac
     5521 tacatacatt gtcatcaaga tattcaaatt tttgattttt agctttttct aaatcacttt
     5581 ttaatccttt atgattttct aataattgat tacgtctatt ttcttcatgc gtgatttgtt
     5641 gtttgttttg ctttaatctc gttttaaggt ttgctaccgt tccattttca acgtgtaatt
     5701 catttgttaa agcatggatt ttgttctcat tacttgcgct gttattgtct tctatgcgtt
     5761 tcaattctga ttgtttatca gctaattgat tacgcaaatt aatttcttcc ttaccgtttt
     5821 gaatatctat acgctcattt tcaagttgct caatttcttg tttgataatt gcgtatctat
     5881 cattatcgaa ttctggtaca tcctgcttat tttgttgtgt ttgattaata cgtatcggaa
     5941 tatctttgat gtctttgtta atctgtttta tcttgtcagt aagaattttt ttctttgttt
     6001 caatttcatg atcaccaaga atattattta attctttaaa atcatcattt gttttaatga
     6061 catcctcatc attgattggt ttagcaattt caaacaacaa acttcttcgc ttcttccaat
     6121 ctagtaagtt aaatgcttga gggttcgtaa ttaacttgaa tacatcttca tcaatcagtt
     6181 catcaatacg agctttataa tcctttactt ttattgattc atcattgata tattgtttct
     6241 tcgttcgact tcgtgagtat tccttgcgat tcgttttttg atttattgtg tatttaggat
     6301 gtgactcttt tttaaaagtc gtaatttttc cgtcgatttc aaattctgcg aaaacagtcg
     6361 gaattaactc ataattttct tcgttttttt cgtttaaaga tacagggtta aatgatttgg
     6421 ttgatccgtc caaaccttta tcgaaaagca gccattgtaa tgcggttgct gtcgtagtct
     6481 tacccgttgc attattgccg tatatttttg catctttgcc gttaaagtta aagctttctt
     6541 ctttgattcc agcaaagttt gatatagtta acttatttat tttcatatct ttcctcatgc
     6601 tcctttttta atcttccgat gacctcttag cacctcgata attaaatttt ttattcgttc
     6661 atggctgtct ggattgattt catgtatctg cacaagctta ttgtttgttt tgtaactgtc
     6721 gtgatagtgt aagaaattaa tcgataagta tccgtgatga ttacgttcaa tttccaataa
     6781 tgctcgttgg tttgacaaag tatattcgtc gaataacgtc ttaaaaatat tcaatatatt
     6841 tctttctgta tctctcatgc ttatacctac catctcatga ctaagttaat tagcctgtct
     6901 ctttcgtctg tgttctcttc aatccattca taaatagatt gatttaatat gtctaatgct
     6961 gtgtatagat cattctcatc tgttatattt ataccgtcga taaatctatc ttctaaatct
     7021 aagacattca ctagaatgct gtaatcttgt ttcttaactg ctaatttaaa atcgaatccg
     7081 tctacattaa ttactttttg acatacatcg ccaattttgt agtacattgt tgacacttcc
     7141 tttatttcgt tttatattga atatgcatta attttctaat tgtttagact gttactcatt
     7201 gccgtgagta acagtttttt tattcttcat aaaagtattc cttataaaat atgaatgttg
     7261 cgatacttgc gaatcccgca atcgaccatg cagtggtgaa gtatagaaac ggcataagta
     7321 caattgccaa gactgtgaag cataatactg ctaataggta gcttttataa atgttgctca
     7381 ttttattctc tccttatata tttcattgaa atgctcatcg acgaatttat tcatctttct
     7441 tgcgttaaat ctccagcgat taaaattctc atctgggtaa tgcacaattc cttgcgctct
     7501 tagttctttt tcaaatctag gatgaaatag taatctgtcc ttgatagtct catcagatgc
     7561 aatttttaat ttcttcttta agtcgctcat gttccataca gggtctaatg agtaagctat
     7621 taactcttca tattcatctt ttgtgataag cacgtgtgtt tcaggtattg gaacggttac
     7681 gtttaataca tgtggcattt ctatcattcc tttcgtgtat aatattgtta tctcctacag
     7741 agaggaggta aggaatctat ataaaacctg ttatcataga atcgcggaca gaacaccgaa
     7801 aatcagagcc acaagtgaca gagttaacat cagtaaataa ggtaagtgct ctttccaacc
     7861 ccaaggatgg ttttttaaag aagtttttat atcatttaaa atcttaaaca tttgaaatcc
     7921 tcctttttcg tcactcttta attggagtgg cgttgatttt tttgtctaac tttttcaatg
     7981 ctaatttgta aataactgaa gcatgttcgg ttttaaaatg agattcagca ataattttca
     8041 atgtttctaa tttatttctt gcatcaccgt atgtggtact ttctgataga acaccttcta
     8101 aaatttgttg aactcgataa tctaaaagtt ttaagtcttt attgatgcat tgttcgacac
     8161 actcttcttt ggttaatgtg atttgttcca tagtgttctc ctattaagat gtttgttttt
     8221 ctcctaaaaa cttattaaca aagtattgtt gtcctttgcc tgttactttt ggcgtcttac
     8281 taattgatgt gtgaccgtcc gaatgtgtga ttgatgtttc tttaatttcg aataactcac
     8341 gttccattga atactgtgta ggcatgttat aatccacacc cttgcgttta ataaggaatc
     8401 cgttttgacg taaccactca aacaatctgc gttgcccgat gtttacaccg ttttgtttaa
     8461 tgatctttgc taactctcca actaaaattg atgtcttagt agtagctact gcatctgcaa
     8521 atacaatttt tggtttatca cgttcaatct ttgtttctaa ttgattgatt gtgttgttag
     8581 caatttttaa agcacgttgc ataatcattt ctgggctatt ccatgctttt tcaacttgga
     8641 tgaagtactc tctaaaatca aaaccttttt ctgtacctga catcattgca acatgtttag
     8701 ctacatcaag tgttaaagca taatcttcta gttgtcttac agctccgtta ttaacaaccg
     8761 tacttgtaag tacacttgta aaatccctat tttctttgaa atgcttcaag ttaatttctg
     8821 cccaagcgct aaaacgcttt ttaacttcca aagctttata taactctctt gcacttattg
     8881 cgatttctcc attttctttt tcttgaatat tgaacatttc tcctatgttc gattttgttt
     8941 gtaatgcttg catattgttt atgctccttt cgtgtataat gttgttatca acctaaggag
     9001 gtgataagta tgaaacttct agttacttta aaggatggtt caaaaaaaca tgtttcggat
     9061 ttaaagaaaa ttgtttttcc aggatatgaa ggaattgaaa ctgttacaaa agaggaaatc
     9121 gaaacatttt ttctagaccc tactaaaact tatgtgtttg ttggatctca aactctaagt
     9181 gtggaggcag ggcaaatcct taccgttgaa tttagctaac ctttttcaac aactctgcaa
     9241 ctgctcgcaa cagttcaggg ttgttgtttc tttctaaaca gtaactagca tgcttgagta
     9301 atttgagttt taatttattt ttttctttcg caattctaaa tttttgtaac atttgtagtt
     9361 cctcctttat tcgaaatctt caattgacaa ggtttcaatt cgtttttggt aacgatataa
     9421 ataaaagttc ttcaacatgt catacattct gctagcttca ccgtattcac tctcttttaa
     9481 atcagaatta agcgttacac caaaagctga taatgtaagt tttctaatgt ggtcatgaat
     9541 ttcactagcg tatgctttgt aattttcata acatcctatt ccgtgttgat atttcttcaa
     9601 agataatgga tgtcctaagc cgagattgtc agcacctctt aaacgttctg tataagcaaa
     9661 ctttttatta atttcatcaa aatcgttatg gctgattctt actttgttga aaattgaacc
     9721 tgaactgatt ggtttcttgc catttatagc ctctctaact tcttttgcta taatttcttt
     9781 caactcttct ttggttaatg tgatttgttc catagtttcc tcctgttacg acatttgtac
     9841 aggtttctgt acattttgtt caaaaaaata tctacctact tttgttggtg ggatttctaa
     9901 taattcacag attcgtttta tttcccattg tgtaaataaa ttttttcctt gcaacttgtg
     9961 attaatagat gtccttgaaa tagggattgc gttcgctaaa gaactttggc tatatctata
    10021 ctctgccatt ctttcgtaca gcaaactata atcgaaattg tatatcataa actcacctcc
    10081 cttcttgttc ggttttctgt acaaatcaat taaaacacct ttgttcaaat aagtcaacac
    10141 ataaaataca tttttctgta caatatttgt taaaaattat tgataatcgt cattgtacgt
    10201 agtattatgt tcttaggagg tgttcagaaa tatgaacagt tttaaggata gattaaagca
    10261 aattatgtct gaacggaaga tatctcaatc agagctatca agaaggactg gtattggtag
    10321 aaactcaatt agcgattatt taaacggaaa atatgaagcg aaacaagaca aagtctttga
    10381 actagcaaag gctttaaacg ttaacgaagc gtggcttatg gggtttgata tttctaagaa
    10441 tagaaaaatt gaaaataacg acatcacttc catatacagt aaactcacgc ctccaagaca
    10501 aagcaatgta ctaaaatatg cgactaatca attagaagaa caaaataatg acagtgataa
    10561 tctggtagat ttcaattctt acattcaaga aaaatccgaa gtggatatat atggttgtgc
    10621 gtcagctggt attggcgaaa gattatataa cgagcctatt tcaaaagaat tcgtaagagg
    10681 ttatgtcccc gcacatgata tagctttaaa agtaaatgga gactcaatgg agccgttatt
    10741 taaaaacgga caaattatat tcattgaaaa atctcacact atcaaagatg gacaaatagg
    10801 cgtctttatt ataaatggag atgcttacgt aaagaaagtt tatgtagaag ataatagatt
    10861 aacgttggtt tctttaaata aaaagtataa agatttatat ttttatgata acgaaagtgt
    10921 gaggttagtt ggaaaagtta ttttatagga ggtagtaaaa tgaaacctag aaagcaagat
    10981 gaaaaaatat tatcagatca atacagttac tttgaaccaa taatcagcga cagttgcgac
    11041 ataaaattcg acgaaaacaa gaggagaatg ggttctatat tcatttcaca tgaagagatt
    11101 tgttttataa ggaaagaaga agattatata ttcaaaatct cattatcaga ggtgatagat
    11161 tataacactg ttgttactat ttggaaaaac caagcttttt taacattaaa cgataataga
    11221 aaattaacag tttatttcgt aacaaactct cctttaacag gattcatctc aattttaaaa
    11281 acttatatgc aattatctaa gaataaggaa acaattatct cgaatgattg tctacctatt
    11341 aatgatgatg aacaaactaa agttgaaatt ttcgacgtcg taggattaaa ttatgaaggt
    11401 cgtagaaaag aattaaagaa acttatcaag aaaatgaaaa ataacgacga tttctttttc
    11461 ttatatagtg atttgaaagg aaatgaactt aaagaagaat tactttatga agacaaggtg
    11521 tatgaaattt ctgattacga ggttattcct ggtgtatttt tacaaaaaga accggataat
    11581 ccttatgatg aaaacgcgat aaaagttatg atttcaaatg aatactctga atttcacgtt
    11641 ggatatgtac ctagagagta tgcttcaaga ttagtcaatc atatggacaa catcgtttct
    11701 tgtaacgcat atattaatgg tggtaagtat aaaactttag attatttaga agagaaaatc
    11761 gttactaaag aatcagacta tggattacga gtacatttag aatacaaagt ttgagatagg
    11821 taaagattgt atttttataa gtaattacta taaataatag aaaattcatt tcacaggagg
    11881 gtttaacatg gattttaaag aagttgacat taacattgaa gagtgggaaa tggttgaaat
    11941 ccccttttat acagaagaag aactgactta tagattgaac aatggtttac ctataactaa
    12001 a
//
LOCUS       DAKPJH010000074        11855 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.074, whole genome shotgun sequence.
ACCESSION   DAKPJH010000074 DAKPJH010000000
VERSION     DAKPJH010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11855
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.074"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..619
                     /locus_tag="OY092_001817"
     CDS             <1..619
                     /locus_tag="OY092_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HCX1076758.1"
                     /translation="YLIDLHQHQNSSIEVLREFAEVNEVPIVDRLTLDLIKQLIRMNN
                     VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG
                     NALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIG
                     IVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE"
     gene            622..1545
                     /locus_tag="OY092_001818"
     CDS             622..1545
                     /locus_tag="OY092_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCX1076759.1"
                     /translation="MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQ
                     MTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVK
                     AQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQ
                     VQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTH
                     IMSPNDICLIEELAPFFEAGIDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYE
                     DEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY"
     gene            1557..2825
                     /locus_tag="OY092_001819"
     CDS             1557..2825
                     /locus_tag="OY092_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCX1076760.1"
                     /translation="MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLG
                     GQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKT
                     GATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
                     MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLE
                     VDDNGELDVFYNQGEVTPFAMSPKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATV
                     VSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSK
                     KSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNS
                     LDAARHPLQIVQIKVDRPIYPNNMMRKEIG"
     gene            2825..3448
                     /gene="udk"
                     /locus_tag="OY092_001820"
     CDS             2825..3448
                     /gene="udk"
                     /locus_tag="OY092_001820"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HCX1076761.1"
                     /translation="MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKD
                     QKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFK
                     PKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY
                     LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ"
     gene            3476..3952
                     /gene="greA"
                     /locus_tag="OY092_001821"
     CDS             3476..3952
                     /gene="greA"
                     /locus_tag="OY092_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HCX1076762.1"
                     /translation="MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGD
                     LSENSEYDAAKDEQGFIEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDE
                     EESYQIVGSAESDAFNGKISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ"
     gene            4279..5013
                     /gene="pxpB"
                     /locus_tag="OY092_001822"
     CDS             4279..5013
                     /gene="pxpB"
                     /locus_tag="OY092_001822"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HCX1076763.1"
                     /translation="MDVRFINEQTIMIYFENNISEETYRNVTAMVRWIREKEILEIQD
                     IVPSYRAVLIYFDEQAITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGP
                     DIEEVAKHNRITVEQVIEKHTSKPYLIYMLGFMPGFPYLGGLDQQLHTPRRNQPRLKI
                     HAGSVGIANNQTGLYPSDSPGGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQ
                     EFIQIERDISDGNFNVDDWVVIENVN"
     gene            5003..6013
                     /locus_tag="OY092_001823"
     CDS             5003..6013
                     /locus_tag="OY092_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000023326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HCX1076764.1"
                     /translation="MSIKILQPGLFSTVQDLGRKGYEHIGFSGSGAMDQFSFKVAQSL
                     INNDGPAIEYTLIGPTIQFNTQNTFVITGGSVNASLNNKTISMNSVILAEKGDILKIG
                     AITKGARGYLTFGHSINVPSIAESYATHTRSSIGGFKGRKLLANDVITVKINNDFKEN
                     IGKTIHLQDDLLPENNIIHILQGPQFEAFSEEARAKIVNYPYLITEQSDRMGYRLEGD
                     SVAPINQADIISEPVALGSVQVPNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQM
                     KPQDTIQFKWISFQEAVDKNREQMSLFNEILKSHQKTPIFDTSSLRHTSKKLATILKG
                     DL"
     gene            6015..6464
                     /locus_tag="OY092_001824"
     CDS             6015..6464
                     /locus_tag="OY092_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HCX1076765.1"
                     /translation="MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEINFTDSNHLAAHS
                     NQSNQSMNNNDLTASKANDNSDVSTNDYHDIKSPMVGTFFLQDSKELTEPIVKVGDKV
                     NKGDIIGYVEAMKVLNEVTTDVAGEITEIVADHGTNVEYDQVLVRIK"
     gene            6478..7839
                     /locus_tag="OY092_001825"
     CDS             6478..7839
                     /locus_tag="OY092_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HCX1076766.1"
                     /translation="MLRCLIANRGEIAVRIIRACREYGIETVAVYAKRDEQSLHVHLA
                     DQAICIGEANALDSYLNIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFI
                     GPTKKTMEMMGDKITARQTVHHAGVPVIPGSNGAVNHVSEIEKLAKDIGYPVVIKAAS
                     GGGGKGIRIVKKAEDLEKAFKEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQD
                     NYVHLGERDCSVQRKNQKLIEESPCAALTEERRQQICNDAVKVARAANYRSAGTIEFL
                     VTDTAHYFIEMNARIQVEHTVTEMRAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIE
                     ARINAENPEKKFQPTPGKVTALHLPQGFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSH
                     DRASAIDKLKATLDEMVIDGFSTTADFLYAVLNYPLYRDGDAKDVDIKFLEKHQIVKG
                     VEL"
     gene            7839..8591
                     /gene="pxpA"
                     /locus_tag="OY092_001826"
     CDS             7839..8591
                     /gene="pxpA"
                     /locus_tag="OY092_001826"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HCX1076767.1"
                     /translation="MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENV
                     MNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQ
                     VKINHVKPHGALYQMGAKDREIASVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT
                     ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQAD
                     TICVHGDGEHALLFVSKIREILMKEGIDIQSL"
     gene            8603..9835
                     /locus_tag="OY092_001827"
     CDS             8603..9835
                     /locus_tag="OY092_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HCX1076768.1"
                     /translation="MGRNLKLKHRESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQT
                     AVFTSQFLASFAFAILLSIIIDIGAQINIWRILVVTGLRGQEISNKVVPGLGTVISIL
                     IAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMI
                     LGIVMILVVAYVMFVSNPPYGDAFVHTFAPEHPMKLVLPIITLVGGTVGGYITFAGAH
                     RILDSGIKGKQYLPFVNQSAIAGILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVF
                     EHAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLDERSNLIVIVFIVIST
                     MIFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAV
                     LVTILTGIFSFKEVLQLF"
     gene            10127..11347
                     /locus_tag="OY092_001828"
     CDS             10127..11347
                     /locus_tag="OY092_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HCX1076769.1"
                     /translation="MGYRTLKSIFHEHNESKMKDEYTKRFNSLASFNTNINIIPMENG
                     KKVNDLEYPLFFMVTKNLSKKQELISINSRKIDRALNSLPYAAREQYFNDLLIDELQS
                     TNEIENVFSTKQEIAHALNNQASEFLKFRGLVDQYKEIELNKKIKVDNVRDIRAIYDK
                     LVSNEINEQDKLDGELFRKNFVGVHDGSTNKYIHVGLQPETKIVEYIGEMLTFLKYFD
                     APQPFKIMASHYLFEYIHPFYDGNGRVGRFIIAKLLSDYYDNYTALTFSYVINRNKSK
                     YYKAFMTASNHLNCGDLTEFIDTMLELLIAGQERILDELIPKMDATEKLTLYLTSHYK
                     QIDYEFLYLLSMDKLFGNKRNRLTLIDLENILGVGRVKINNTIKKFGNYLVKIKSRPT
                     IYEISDEFLNSIIK"
BASE COUNT         4281 a         1587 c         2303 g         3684 t
ORIGIN      
        1 atatttaata gatttacatc aacatcaaaa tagttcaatc gaagttttgc gtgaatttgc
       61 cgaagtaaat gaagtgccaa tcgtagatcg tttaacatta gatttaatta agcaattaat
      121 tcgtatgaat aatgttaaaa atattttaga aattggtaca gcaatcggct atagttctat
      181 gcaattcgct tctatatctg atgacattca tgtcacaacg atagagcgta atgaaacgat
      241 gattcaatat gctaaacaaa atttagctac ttatcatttt gaaaaccagg ttcgaattat
      301 tgaaggtaat gctttagagc aatttgaaaa tgtaaatgac aaagtttatg atatgatatt
      361 tattgatgca gcaaaagcgc aatcaaagaa attttttgaa atatatacac cacttttaaa
      421 gcaccaaggt ctcgtaatta cagataatgt tttatatcac ggttttgtat cggatattgg
      481 gattgttaga tcgagaaatg taagacaaat ggttaaaaag gttcaagatt ataatgagtg
      541 gttaataaag caaccaggat atacaacgaa ttttttaaat atagacgatg gattagcgat
      601 ttcaattaaa ggagaatgac tatgacagaa ttacttgtca cacccaagtc attaagccat
      661 atggaaacac ttattgattt aggtgcagat gcttttgtaa ttggcgagca aaagtttggt
      721 ttaagacttc caggggaatt caatagacaa caaatgacag aggctgtcgc attagctcac
      781 aaaaacgata aaaaagtata tgcggcggtg aatggattat ttcataatta tcatttagat
      841 gctgtagaag attatattaa ttttttacat gaaatacgag ttgacagaat tattttcggg
      901 gatccagcag tagtaatgta tgtgaaggcg caagagaatc caataccact tcattggaat
      961 gcagagacgt tagtaactaa tcattttcaa tgtaattact gggggaaaag aggcgcatca
     1021 agagctgtct tagcacgtga gctgaatttg gatgaaatta ttaatataaa agaaaattca
     1081 aatgtggaaa ttgaggtgca agttcaagga atgacttgta tgttccaatc aaagcgtatg
     1141 ctactaggca attattatac gttccaagat cgccaaatga aaattgaacg tcgcaatgat
     1201 gaacaatctt tattacttta tgatgaagaa agacaaaata attacccagt ttacgaagat
     1261 tacaatggta cgcacattat gtcaccaaac gacatttgtt taattgaaga attagcacca
     1321 ttttttgagg cgggtataga ttcatttaaa atcgatggta ttctacaaac ggaagaatat
     1381 attaatgtgg taacggaaca gtatcgtcaa gcgatagatt tgtacaatga agatcctgaa
     1441 atctatgaag atgagaaatt tatgttgatg gacccaattg aagaaattca acctgatcat
     1501 cgaccatttg acgaaggttt cttatataaa caaacggtat attaaggagg ttaatcatga
     1561 agacaataga agagattaaa tcaactccta aaacagttat gaagaaacca gaattattag
     1621 cacctgctgg aaacttagaa aagttaaaaa tagcagtaca ttatggcgct gatgccgtat
     1681 ttttaggtgg tcaagaatat ggattacgtt caaatgctga taatttcacg atggaagaaa
     1741 tagctgaagg tgttgaattt gcgaaccgtt acggtgccaa aatttatgtt acgacaaata
     1801 ttattgcaca tgatgagaat attgaaggtc tagaatcata tttgcgtaat ttggaaaaga
     1861 ctggtgcgac aggtatcatt gttgcagatc ctttaattat cgaaacatgt aaagaagttg
     1921 cgccaaaact tgaaattcat ttatctactc aacaatcact ttctaattac aaagctgtag
     1981 aatattggaa agaagaagga ttggatcgtg ttgtattagc acgtgagacc ggcgcgatgg
     2041 aaatgcgtga aatgaaggaa aaagtagata ttgaaatcga agcatttatt catggtgcta
     2101 tgtgtatcgc ctattcaggt agatgtacat taagtaatca tatgactgca agggattcca
     2161 acagaggcgg ttgctgtcaa agttgccgtt gggattatga attattagaa gttgatgata
     2221 atggtgaact tgatgtattt tataatcaag gtgaagttac accgtttgcg atgagtccta
     2281 aagatttaaa attaatcgaa tcaattcctc aaatgatgga tattggtgtg gactcattaa
     2341 aaattgaagg acgtatgaag tcaattcatt atattgcaac agttgtctca gtatatcgta
     2401 aagtcattga tgcgtatgcg gcagatcctg acaactttaa gattaatccg gaatggttaa
     2461 ttgagttaga taaatgtgca aatagagaca ctgcaccagc attctttgag ggtacacctg
     2521 gttatgaaga acagatgttt ggtcaacaac aatctaaaaa atcaccattt gatttttgtg
     2581 gtttggtatt agattataat gaagatacaa aaattgcgac tattcaacaa cgaaataact
     2641 ttaaaccagg tcaagaaata gaattctttg gtccagaaat tgaaacattt acacaagtag
     2701 tagaagcaat ttatgatgaa gaaggtaaca gcttagacgc ggcgcgccat ccattacaaa
     2761 tcgttcaaat taaagtggat cgcccgatat atccaaacaa catgatgaga aaggaaattg
     2821 gctaatgaaa gctactacaa tcattggcat agctggtgga tctggctcag gaaaaacaac
     2881 tgtaactaac gaaattatga aaaacttaga aggtcatagt gtcgctttac ttgctcaaga
     2941 ttactattat aaagatcaaa agcacttgac tttcgacgag cgcctagaaa ccaattatga
     3001 ccatccattt gcatttgata atgatttatt aattgaaaat cttaaagact tgaaaaatgg
     3061 taaagcagta gaagtaccga catatgatta tgctagtcat acaagaagtg atattaccat
     3121 tgattttaaa cctaaagatg ttattatcgt agaaggtatt ttcgctttag aaaataaggt
     3181 attacgtgat atgatggatg ttaaaatata tgttgataca gatgcagact taagaatatt
     3241 acgccgttta acacgagata ctaaagagcg tgggcgttca atggactctg ttatcaatca
     3301 atatttaagt gttgttagac ctatgcatga ccaatttatt gaaccgacta agaaatatgc
     3361 tgatataatt atacctgaag gtgggagcaa taaagttgca atagatatta tgacaacaaa
     3421 aattcagtct ttagttagca agcaatagta taattcagta aaggaagatg acaatatgga
     3481 aaatcaaaag caatatccaa tgactcaaga aggttttgaa aaattagagc gtgaacttga
     3541 agaattaaaa acagttaagc gtcctgaagt tgtagagaaa attaaagttg cacgttcatt
     3601 tggtgactta tcagagaact ctgagtatga tgcagcaaaa gatgaacaag gattcatcga
     3661 acaagatatt caaagaattg agcatatgtt aagaaatgca ttaatcattg aagatactgg
     3721 agataacaac gttgttaaaa ttggtaaaac agtaacgttt gtagaattac caggtgatga
     3781 agaggaaagt tatcaaatcg ttggttcagc tgaatcagat gcatttaatg gtaagatttc
     3841 aaatgaatca ccaatggcta aagcgttaat tggtaaaggt ttagatgatg aagttcgtgt
     3901 tccactacct aatggtggcg aaatgaacgt aaaaattgtt aatatccaat aaatgatcaa
     3961 atagattgtt taattgcgcg attgaagtgt gttaatgata cttcggtcgt gcttttttat
     4021 attcaaaatc aaaaaatcgg acagatgaaa agtaaaaatt ttccatcaga ccgattgata
     4081 gcagaaccta aattagtgta agagtttcaa tattaactac tccattttaa aaaaagcaaa
     4141 atatttccaa gaaaacaaat tgattataat ttgttattgt atgcgatttg aattacttat
     4201 taaacaactt gtgcttctca atgatacaat gaaaaggtat tcaatactgg tttattgcaa
     4261 tacaaagggg gatttagagt ggatgtaaga tttattaacg agcagacaat tatgatttat
     4321 tttgaaaata atatatccga agagacatat cgaaatgtca cagcaatggt acggtggata
     4381 cgagaaaaag aaatattaga aattcaagac attgtccctt cgtatcgagc agttctaata
     4441 tattttgatg aacaagctat aacatcttct aaattaattg aaaatttaga acttaacaaa
     4501 tttaatgaaa aaaatgttca tgctgtgaat caaaccaatc gaattattaa aatacctgtt
     4561 caatatggtg gtacatatgg acctgatatt gaggaagtag caaagcataa tcgaataact
     4621 gttgagcaag ttattgaaaa acatacaagt aaaccttatt taatatatat gctaggattt
     4681 atgcctggat ttccatactt aggcggactt gatcaacaac tacatacacc tagacgtaat
     4741 cagccaaggt taaaaattca tgcaggttct gtaggtattg cgaataatca aacaggacta
     4801 tatccatcag attctcctgg cggatggcaa attattggac gcacaccgtt aaaagtattt
     4861 agcagcgagc gtgaaccaat gtcaatgtac gaagcaggag aatggataca attttatgca
     4921 atagatgaac aggaatttat acaaatcgaa agagatatat cagatggcaa ctttaatgtt
     4981 gatgactggg tggtgattga aaatgtcaat taagatttta caaccaggtc tcttttcaac
     5041 ggtacaagat ctaggaagaa aaggttatga acatattgga ttttcaggct caggtgccat
     5101 ggatcaattt agttttaagg ttgcgcagtc attaattaac aatgatggtc cagcgattga
     5161 atatactttg attggtccta ccattcaatt taatacgcaa aatacatttg ttataaccgg
     5221 tggtagtgtt aatgcctcgc taaataataa aactatatca atgaattctg tcatattagc
     5281 tgagaaaggt gacattttaa aaataggtgc tataaccaaa ggtgcacgcg gttatcttac
     5341 ttttggtcat tctatcaacg taccttctat tgctgaaagt tatgcaacac atacccgaag
     5401 cagtatagga ggattcaaag gtagaaagtt attagctaat gacgtaataa cagtgaaaat
     5461 aaataatgac tttaaagaaa acattggaaa gactattcat ttacaggacg atttattacc
     5521 agaaaataat attatacaca ttcttcaagg acctcaattc gaggcatttt ctgaagaggc
     5581 tagagcgaaa attgtaaatt atccatattt aataactgaa caatcagacc gtatggggta
     5641 tcgtttggaa ggtgacagcg ttgcaccaat taatcaagca gatatcattt ctgaaccggt
     5701 tgctcttggc agtgttcaag taccaaatga tggtcaacct attattctgc ttaatgataa
     5761 acaaacgata ggtggttata ccaaaattgc aactgtatgc aaatttgatc tgccaaagtt
     5821 agcacagatg aaaccacaag atacaattca atttaaatgg atatcattcc aagaagctgt
     5881 agataagaat cgggaacaaa tgtctctgtt taatgaaatt cttaagagtc atcaaaagac
     5941 tccaattttt gatacatcta gcttgcgaca tacttcgaaa aaattagcaa caattttaaa
     6001 aggggatttg taaaatgaat attgaaaaaa tcgaacaaat aatcaaatta gtgaaggaaa
     6061 atgatgttaa gaaatttaaa tataaaaatt ttgaagatga aatagaaatt aacttcactg
     6121 actcgaatca tttggctgca cacagtaatc aatcaaatca aagtatgaac aataatgatt
     6181 tgacagcttc aaaagcgaat gataactccg atgtttcgac aaatgattat catgacatta
     6241 aatcaccaat ggtaggtaca ttctttttac aagatagtaa agaattaact gaaccaattg
     6301 tgaaagtcgg tgacaaagtt aacaagggag atattatagg atatgttgaa gcgatgaaag
     6361 tattaaacga ggtaacaaca gatgttgctg gagaaattac tgaaatagta gctgatcacg
     6421 gcacaaatgt tgaatacgac caagttttgg tacgtattaa gtaaaggggg taagtaaatg
     6481 cttcgttgtt taattgcgaa cagaggtgaa attgctgtaa ggattataag agcttgcaga
     6541 gaatatggga ttgaaactgt agcagtttat gcaaaacggg acgagcaaag cttgcatgta
     6601 catttagcag atcaagctat atgtattggg gaagctaatg ctttagatag ttatttaaat
     6661 attgaccgca tcatatctgc tgcacaaatc actggtgcta atgcaattca cccaggatat
     6721 ggatttttat cagaatcaac aaaatttgct caaaccgttg aggaacaagg catagcgttt
     6781 atagggccta ctaaaaaaac gatggaaatg atgggggata aaataacagc aagacaaaca
     6841 gttcatcatg caggtgttcc tgtgattcca ggatcaaatg gtgctgtgaa tcatgtgtct
     6901 gaaattgaga agcttgccaa agacatcggt tatccagttg ttatcaaagc tgccagtggc
     6961 ggtggtggta aaggtatacg tattgtaaag aaagctgaag atttagaaaa ggcatttaaa
     7021 gaagctaaaa gtgaaggaaa aaaatacttt gatgatgatc gtgtttatgt tgaggctttt
     7081 atacctgttg caaaacatgt tgaagttcaa gttatggggg atgggcagga taattatgta
     7141 catttagggg aacgtgattg ttctgtacaa cgtaaaaatc aaaaattaat cgaagaatct
     7201 ccttgtgcag cattaactga agaaaggcga caacaaatat gtaatgatgc tgttaaagtt
     7261 gcacgtgcag caaattatag aagtgcaggt acgattgaat ttttagtaac tgataccgca
     7321 cattacttta ttgaaatgaa tgctcgaatt caagttgaac atactgttac agagatgcga
     7381 gcagaacgtg atttggttgc agcacaactg tatttattgg aacataatca tttacctttc
     7441 tcacaaagcg atattcaatt taatggtcat gtgatagaag cgagaataaa tgccgaaaat
     7501 cctgaaaaga aatttcaacc aacaccaggt aaagtgacag cgttacattt acctcaaggc
     7561 tttaatgtgc gagtcgattc tttactatat cacggttatc aagtttcacc atattatgat
     7621 tctttagtag ctaaagtaat tgtaaaatct catgatagag cttcagcaat tgataagttg
     7681 aaagccacct tagatgaaat ggtgatagat ggattttcta caactgccga ttttttatat
     7741 gcagttttaa attatccact atatcgtgat ggagatgcaa aagatgttga tattaaattt
     7801 ttagaaaaac atcaaattgt taaaggggtg gaattataat gcgagttgat ttgaattgtg
     7861 atttaggcga agcatttgga aattattcct ttggtggtga tcatcaaatt attccgttaa
     7921 ttacaagtgc gaatgttgct tgtggttttc acgctggtga tgaaaatgta atgaatgaaa
     7981 cggtaaaact tgccaaagca cataatgttg cagtaggtgc acatcctggt ttacctgatt
     8041 tgaaaggctt tggcagacga aatatagata tctctaacga cgagatttat aatttgatga
     8101 tttatcaatt aggtgcatta caagggtttt gtcgcattca tcaagttaaa attaatcatg
     8161 ttaaaccgca tggtgcattg tatcagatgg gtgcaaaaga cagagaaata gcaagcgtta
     8221 tagcacaagc tgtttatgac tttgatccat cactagtgtt agtaggatta gcaaattcat
     8281 atctaatttc agaagcaaag aatgtcggat taattacagc ttctgaagtg tttgctgata
     8341 gacgatacga agatgatggg cagctcgtta gtagaaaaga aagtgatgct gtgattactg
     8401 atactgacga agcacttaag caggttttaa agatggtgaa ggaaaataaa gttatttcaa
     8461 aaaacaataa ggaagtaacg ttacaagcag atacaatttg tgtgcatggt gatggagaac
     8521 atgcattatt atttgtttcg aaaattagag aaattttaat gaaagaaggc attgatattc
     8581 aatccttata gggggctaaa aaatggggag aaatttaaag cttaaacatc gtgaaagtga
     8641 ttttgaattt actaaaaacc ataagagatt attgttaggt tctgtatttc tgatggcaac
     8701 ttctgcaatt gggccagcat ttttaacgca aacagcagta tttacatcac aatttttggc
     8761 gagttttgca ttcgcaattt tactatcaat cattattgat attggtgcac aaattaatat
     8821 atggcgcata ttggttgtca ctggtttaag aggtcaagaa atatcaaata aagttgttcc
     8881 tgggcttggt actgttatct caatattgat tgcatttgga ggtctagctt ttaatattgg
     8941 taatattgct ggtgccggtt taggtttaaa tgcaattttt ggattagatg taaaatgggg
     9001 cgcagctatt actgcaatct ttgcaatatt aatctttgta agtaaaagtg gccaaaaaat
     9061 tatggacgtt gtttcaatga ttcttggtat tgtgatgatt ttagttgtgg catatgtgat
     9121 gtttgtttct aatccacctt atggtgatgc ttttgtgcat acatttgcgc cagaacatcc
     9181 aatgaaatta gtcttgccaa tcattacgtt agttggtgga actgtaggtg gttatattac
     9241 ctttgcaggt gcacatcgta ttttagactc tggcattaaa ggtaagcaat atttaccatt
     9301 tgtaaatcaa tcagcaattg ctggtatttt aactacaggt attatgagaa cgttactatt
     9361 cctagcggta ttaggagttg ttgtaacagg tgtgacacta agttctgaaa atccaccagc
     9421 gtcagttttt gaacacgcaa ttggaccaat tggaaagaat atttttggta ttgtgttatt
     9481 tgctgcagct atgtcatcag taattggctc agcatacaca agcgcaacat ttttaaaaac
     9541 acttcataaa tcacttgacg aaagaagtaa tttaattgtc attgtgttta tcgttatttc
     9601 aacaatgatt ttcttgttta ttggaaaacc aatcagcctt ttaattatag caggcgcgat
     9661 aaatggatgg attttaccta ttacgttagg tgcaattttg attgcaagta aaaagaaatc
     9721 aattgttggt gattataaac acccaaattg gatgttcatc tttggtatcg ttgcagtact
     9781 tgttacaata ttgacaggta tattctcatt caaagaagta cttcagttat tttaaaagac
     9841 atttcgaata atagtatcac tgtaaatgtt gttagtatta ggcaagatgt attttgattt
     9901 ccggtgattc atttataaag cataattgaa tatattttaa gaaagagagt ggtgcatgat
     9961 aaatgtactg ctcttttttg ttatgatgaa aaatcttttt ctattgatcg agaaaatagt
    10021 tatttatata gtttttaaag aaaaaaagtg ataatattta gctaatctaa tgaaaatgga
    10081 tttattggac aaaaaataca ttttaaatga gtagaggagg ctgcaaatgg gttacagaac
    10141 tttaaaaagt atttttcatg agcataacga aagtaaaatg aaagacgagt atactaaaag
    10201 atttaattct ttagcatctt tcaatactaa tattaatatc atacccatgg aaaatggaaa
    10261 aaaagttaat gatttggaat atcctctatt ctttatggtg actaaaaatc tatcaaaaaa
    10321 acaagaatta atatcaatta atagtagaaa aattgataga gcacttaatt ctttgcctta
    10381 tgcagctaga gaacaatatt ttaatgattt attaatcgat gaattacaaa gtactaatga
    10441 aattgaaaat gtatttagta ctaaacaaga gattgcacat gcgttaaata accaagcatc
    10501 agaatttctt aagttcagag gcctcgtgga tcaatataaa gagatagaac ttaataaaaa
    10561 aattaaagtt gataatgtaa gagacattag agcgatttat gataaattag tttcaaatga
    10621 aattaacgaa caagataagt tagatggaga gctatttcgt aaaaattttg tcggtgtaca
    10681 tgatgggtca acgaataaat atatacatgt tgggttacaa cctgaaacca aaattgttga
    10741 atatataggt gaaatgctaa catttttaaa atattttgat gcgcctcagc cgttcaaaat
    10801 catggctagt cattatctgt ttgaatatat acatcctttt tatgatggca atggtagagt
    10861 tggaagattt ataattgcca agctcttgag tgattattat gataattata ctgctttgac
    10921 attttcatat gttataaata ggaataaatc gaaatattac aaggcgttta tgactgcttc
    10981 aaatcatttg aattgcggtg atttgacgga atttattgac acaatgcttg agttattgat
    11041 agcaggacaa gaaagaatac ttgatgaatt aataccaaaa atggatgcga ctgaaaaatt
    11101 aacgctttat ttaactagtc attataaaca gatagattat gaatttttgt atctcctttc
    11161 aatggataaa ttgtttggaa ataaaagaaa tagattaaca ttaattgatt tagaaaacat
    11221 attgggagta ggaagagtaa aaattaataa tacaattaaa aaatttggta actacttagt
    11281 taaaattaaa agtagaccaa caatttatga gataagtgat gaatttctaa attcgattat
    11341 aaaataaatg taatatgtga ttcagctata cttattgtat ttgtaagatt gcgtaattgc
    11401 ttcattaaaa aaatatattt gttgagagtg gtgcatgaca aatgtactgc tctttttgtt
    11461 gtgtatcagt attgtgatgt tttaatgcga atattatatg aatcattatg aaatttaata
    11521 aaaataattg aaataattat cattttttct gatatactgt taaacggttt ggaattttta
    11581 agtatacact gtattggttg atataactca actaataatt gcgaacaggg tatttcaaat
    11641 tggaaagtat tatgagcgtg atacataatc aaaattgtag gctaaagaac ctgagacata
    11701 aatcaatgtt cagtgctcta caaagttata ttggcagtag ttgactgaac gaaaatacgc
    11761 ttgtaacaag cttttttcaa ttctagtcaa ccttgccggc ggggccccaa catagaagct
    11821 ggcgaaaaga cagcttacaa taatgtgcaa gttgg
//
LOCUS       DAKPJH010000075        11844 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.075, whole genome shotgun sequence.
ACCESSION   DAKPJH010000075 DAKPJH010000000
VERSION     DAKPJH010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11844
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.075"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            91..861
                     /locus_tag="OY092_001829"
     CDS             91..861
                     /locus_tag="OY092_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1076770.1"
                     /translation="MMKRLNKLVLGISLLFLVISITAGCGMGKEAEIKKSFEKTLSMY
                     PIKNLEDLYDKEGYRDDEFDKNDKGTWTISSEMAIQKKGEALNIKGMVLKLNRNARSA
                     KGFYYVNAIKKDENGRPLDNQIEYPVKMIDNKIIPTKDIKDEKIKKEIENFKFFAQYG
                     NFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYNIPTNKAPELLLKGSG
                     NLDGSSVGYKKIEFTFVEKKGENTYFTANLHFKPSEDE"
     gene            926..1696
                     /locus_tag="OY092_001830"
     CDS             926..1696
                     /locus_tag="OY092_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1076771.1"
                     /translation="MMKRLNKLVLGISFLFLVISITAGCGIGKEAEIKKSFEKTLSMY
                     PIKNLEDLYDKEGYRDDQFDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTT
                     TGKYIVSETLHDEDGRPKSKDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYG
                     NFKDLSKYKDGDISYNPEAPIYSAKYQLTNNDYNVKQLRKRYDIPTNKAPKLLLKGSG
                     NLKGSSVGYKKIEFTFVEKKGENIYFSDGLQFNPSEDK"
     gene            1794..4031
                     /locus_tag="OY092_001831"
     CDS             1794..4031
                     /locus_tag="OY092_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076772.1"
                     /translation="MQRDYLIRVETESMSDFKRLNGLMIGFVIKGEAHIYDENNMTQC
                     NSGDIFIINHRDLYRFQLQQDGIICYIQFQMKYLADKFDDVHCLYFHLTDATTTKNIH
                     QLRNIMARLVSTHIRHNELSKLTEQQLVIQLLMHMIHYVPRTYHSNQSILNDDKVNQV
                     CDYIELHFHEDLSLSELSEYVGWSESHLSKKFAESLGVGFQHFLNTTRIEHAKLDLTY
                     TDETITDIALQNGFSSAASFARTFKHFTHQTPKQYRGDRPAITENQQSAQHNYHDREL
                     ILLLNDYIEEMNHFIEDIEKMNYKEIAFKPTNQQLNQFNHIIQVGYLRNLLNTQYQSQ
                     LLTCHHDFHVNEVLAYDVMPYIMKKLNAPFTYDAEISNIFYDIDLCLDFLLDHNFSLT
                     MHLDQYDSRDYIDAFKVFIHHVALHVSHRKDLKFNLYVTTLHTSLIEMIDYFKALFPN
                     GGLYIHLDQATERHLPLLKRLEPHINHFVFDANSNDAVDFNKMNDDEFKTASQIIINK
                     TNYLIDLMHRHNLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLKLSSKVEGIGY
                     WLNYDLHVSHCRNERDYMNSIELFHQYNGKRPVYFTALLFNKLTSNILYSDDTCIVTG
                     TDSNFQILLYDAKHFNPYLALDNQMNMRATEMIHLNINALEDGMYKIKHFTLDKENGA
                     LFNLWRKHHTIHGMDKDSIDYVNRMSFPKLEVYDIDITETLALNIKMITNGIHLIEVK
                     RYPSS"
     gene            4182..5360
                     /locus_tag="OY092_001832"
     CDS             4182..5360
                     /locus_tag="OY092_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCX1076773.1"
                     /translation="MNQQLIETLKSKEGKMIEIRRYLHQHPELSFHEDETAKYIAEFY
                     KGKDVEVETNVGPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHA
                     CGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGALDGVDHV
                     LGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTA
                     LQTVVSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEINR
                     LSKGLEDMYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEADLEFGVEICEPQPPSED
                     FAYYAKERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN
                     "
     gene            5362..6750
                     /locus_tag="OY092_001833"
     CDS             5362..6750
                     /locus_tag="OY092_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076774.1"
                     /translation="MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGADM
                     GTISIAVSLTALFSGMFVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLI
                     LGRIIQGVSAACIMPSTLAIMKTYYEGAERQRALSYWSIGSWGGSGICSLFGGAVATT
                     MGWRWIFIFSIIVAVLSMLLIKGTPETKSEVTNTHKFDVAGLIVLVVMLLSLNVVITK
                     GAALGYTSLWFFGLIAIVIVAFFIFLKVEKKVDNPLIDFKLFENKPYTGATISNFLLN
                     GVAGTLIVANTFVQQGLGYTALQAGYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLG
                     TFIVVIGIALISLVFLPGIFYVISCVVGYLCFGLGLGIYATPSTDTAISNAPLDKVGV
                     ASGIYKMASSLGGAFGVAISGAVYAGAVAATSIHTGAMIALWVNVLMGIMAFIAILFA
                     IPNDDKRVKDAK"
     gene            complement(7237..8898)
                     /locus_tag="OY092_001834"
     CDS             complement(7237..8898)
                     /locus_tag="OY092_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HCX1076775.1"
                     /translation="MSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRDILNKFT
                     SNPVLGVIAGIVVTILIQSSSGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFI
                     IGIDLGEYAMPILALGAFLIFFFKRSKINNIGRILFGFGSLFFGLEFMGDAVKPLASL
                     DGFKQLMLDMSTNPILAVIVGAGLTALVQSSSATIGILQEFYQQDLISLNAAIPVLLG
                     DNIGTTITAILASLAGSIAAKRAALVHVIFNLIGVIIFTIFLPVVIHLISLLQDVWHL
                     KPAMTIAVSHGIFNITNTLIQLPFVAGLAWIVTKLVPGKDIADDYKPQHLNKDLVYHA
                     PGVALQETQKELQNVGQIVLSMFEDIREITKDDKKLIKKLEQKHQAVETINDSIRNYL
                     VRISTKAITKADVERLAVMFDVNRSILKVAELTEEYVAQLKRQHDEDIRITEDAQRGM
                     DKLFNHVAESFDKAIDMLDVYDKTKKDEIVERSRESFNIEHKLRKGHIKRLNRGECTT
                     KGGLLYIDMIGVLERIGYHSRNVSEALVGLNDDVPTDEEIATTEI"
     gene            complement(9225..11000)
                     /locus_tag="OY092_001835"
     CDS             complement(9225..11000)
                     /locus_tag="OY092_001835"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HCX1076776.1"
                     /translation="MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRD
                     GQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMENHFECLWDLFRSIPSLEI
                     DNASVLDEFYWLNKEDPNYSRCRVIEKQGQRLVTDGDFTLTKKAIKEILDLCLTNEED
                     LDDVKITDVFSDDFFNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSAL
                     KFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKVDVTTSQKIAREILIHRHGKAE
                     SIKLTVDDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDK
                     FCQNIPQKSWFVSATSTTNNKDIIDTIESICKRDPLAGKTVTGGIITINDSAWQISFT
                     INRQQQFKDQPKNEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVPTDKI
                     EDLAKHASNTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLAFIGNFAETERDTVFTT
                     EYSVRTAMEAVYQLLNINRGIPEVINSTFDLRVLMDAIYELNDHQDLREITKDSKMQK
                     LALAGFLKKIKGTYIETLLKEHKLL"
     gene            11351..11824
                     /locus_tag="OY092_001836"
     CDS             11351..11824
                     /locus_tag="OY092_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HCX1076777.1"
                     /translation="MSKIRSFTILSLLIYLAMTCYTVVTYPKLPTKVPIHYNLAGDAD
                     NFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLE
                     IMSYMSIFTVLEIWQIQHHHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ"
BASE COUNT         4030 a         1863 c         2140 g         3811 t
ORIGIN      
        1 tttgataata ttaaagtgaa aaagtgttat aaattgaaat taatgtgtaa tttgcaaaag
       61 taaatcattt taaaagaaga gagttgtaag atgatgaaac gattaaacaa attagtgctt
      121 ggtattagtc ttctgttttt agtcattagt atcactgctg gttgtggcat gggtaaagaa
      181 gcggaaatta agaaaagttt tgaaaaaacg ttgagtatgt atccgattaa aaatctagag
      241 gatttatacg ataaagaagg ctatcgtgat gacgaatttg ataaaaatga taaaggaaca
      301 tggactatta gttctgaaat ggcaattcag aaaaagggag aagccttaaa tataaaaggt
      361 atggttttga agttaaatag aaatgcaaga agtgcaaaag gattttacta tgttaatgcg
      421 ataaagaagg atgaaaatgg cagacctctg gataatcaaa tagaatatcc cgttaaaatg
      481 attgacaata aaatcattcc aactaaagat atcaaagatg aaaaaataaa aaaagaaata
      541 gaaaacttta agtttttcgc gcagtatggc aactttaaag atttatcgaa gtacaaagat
      601 ggagatattt catataatcc agaggtgccg agttattcag ccaaatatca attaactaat
      661 gatgattata atgtaaagca attacgtaaa agatataata taccaacgaa taaagcgccg
      721 gagttattat tgaaaggttc aggaaattta gatggttcat cagttggcta caaaaaaatt
      781 gaatttactt tcgtagagaa aaaaggagaa aacacttact ttacagctaa cctacatttt
      841 aaaccgagtg aggatgaata atcgtgacta ataaagagta tgaaatcgat tcaaggaaac
      901 aaaataaaaa gaagagagtt gtaaggtgat gaaacgttta aataaattag tgttaggtat
      961 tagtttctta tttttagtca ttagtattac tgctggttgt ggcataggta aagaagcgga
     1021 aataaagaaa agttttgaaa agacattgag tatgtatcca attaaaaatc tagaggattt
     1081 atacgataaa gaaggctatc gtgatgatca gtttgataaa aatgataaag gcacatggat
     1141 tattaattct gaaatggttg ttcaacctaa aggggaacgt atgaaatcaa aaggtatggt
     1201 tctatatatg aatagaaaca ctaagactac aaccgggaag tatatagtga gtgaaacact
     1261 tcatgatgaa gatggtagac ctaagagtaa agataaagaa tatcccgtta aaatggtaga
     1321 caataaaatc attccaacta aaggtatcaa agacgaaaac ataaaaaaag aaatcgaaaa
     1381 ctttaagttc ttcgcgcaat atggcaactt taaagatttg tcgaagtaca aagatggaga
     1441 catttcatat aatccagaag cgccgattta ttcagctaaa tatcaattaa ctaataatga
     1501 ttataacgta aagcaattac ggaaaagata tgatataccg acgaataaag caccaaagtt
     1561 attgttgaaa ggctctggaa atttaaaagg ttcatcagtc ggatacaaaa aaattgaatt
     1621 tactttcgta gagaaaaagg gagaaaatat atattttagt gatgggctac aatttaaccc
     1681 aagtgaggat aaataacctc actgcctccc acacgattca atatgaaatt caaatatgtt
     1741 gctgtaaaat aatgtaaaat aaacgtattc atattactga attgagggat agtatgcaac
     1801 gtgattattt aattcgagta gaaactgaga gtatgtcaga tttcaaaagg ctcaatggtt
     1861 taatgattgg ttttgttatt aaaggtgagg cgcacattta tgatgaaaat aatatgacgc
     1921 aatgcaacag tggcgacatt ttcatcatta accaccgcga cttgtatcga tttcaacttc
     1981 aacaagatgg catcatatgt tatatccaat tccaaatgaa atatttagca gacaagtttg
     2041 atgatgtgca ttgtctatat tttcacttaa cagatgcgac cacaaccaaa aatatacatc
     2101 aactgagaaa tataatggca agactggttt caacacatat tcgacataat gagttgtcta
     2161 aattgactga gcaacaactt gtgattcagt tgcttatgca tatgattcat tatgtcccgc
     2221 gtacatatca ttcgaaccaa agtatcttaa atgatgataa agtgaatcaa gtatgcgact
     2281 atatcgagtt acattttcat gaagacttaa gcctttcgga attaagcgaa tatgttgggt
     2341 ggtcagagag ccatctgtct aaaaagtttg cagaatcgct aggtgtagga ttccagcatt
     2401 tcttaaatac gacgcgaatt gagcatgcga aactcgattt gacatacaca gatgaaacga
     2461 ttactgatat tgcattgcaa aatggctttt caagtgcagc gagctttgcg agaacattta
     2521 aacactttac gcatcaaacg cctaaacaat atcgaggtga tcgtccggca atcactgaaa
     2581 atcaacaatc ggcacaacat aattatcacg accgtgaatt gatattactt ttaaatgact
     2641 acattgaaga aatgaatcat ttcattgaag atattgaaaa gatgaactat aaagagattg
     2701 cctttaaacc aactaatcaa caactaaatc aatttaatca tattattcaa gtgggctatt
     2761 tgaggaattt gctcaataca cagtatcaat cacagttact tacatgccat catgattttc
     2821 atgtcaatga agtattagca tatgatgtga tgccatatat tatgaaaaag ctcaatgcgc
     2881 cattcacgta tgatgcagag atttcgaata tattttatga tatcgatttg tgtttagact
     2941 ttttattaga tcataacttt agtttgacaa tgcatttgga tcagtatgac tcacgtgatt
     3001 atatcgatgc attcaaagta tttatccatc acgttgccct gcatgtcagt catagaaaag
     3061 atttgaagtt caacttgtat gtgacgacat tgcacacttc tttgattgaa atgattgatt
     3121 attttaaagc gttattccct aatggtggct tgtacattca cttagatcaa gctacggaaa
     3181 gacatctacc attgttgaaa cgacttgagc cacacatcaa ccattttgta tttgatgcca
     3241 attcaaatga tgctgttgat tttaataaaa tgaatgatga tgaatttaaa accgcgagtc
     3301 aaataattat taataaaacg aattacctta tcgacttaat gcatcgccat aacctaaaga
     3361 gaccacttat tttactcaat tggaatacat tgacgggtga tacatttatt acaaacggcg
     3421 aatattttag aggtggtatc atcattgagc aattattaaa attaagttct aaagtagagg
     3481 gtatcgggta ttggttgaat tatgatttgc acgtcagtca ttgtagaaat gaacgggatt
     3541 atatgaattc tattgaactg tttcatcaat ataatggaaa acgtccggtc tatttcacgg
     3601 cattgctatt taataaatta acaagcaata ttttgtattc tgatgataca tgtattgtca
     3661 cggggactga ttcaaatttt caaatattgt tatatgatgc aaagcatttt aatccgtact
     3721 tagcgttgga caatcaaatg aatatgcgtg caacggaaat gatccatttg aacattaacg
     3781 ccctagaaga cggtatgtat aagattaaac attttacctt agataaagaa aatggtgcgt
     3841 tatttaatct ttggcgcaaa catcatacga tacatggcat ggacaaggac tctatagatt
     3901 acgttaatcg aatgagtttt ccgaaattag aagtatatga tatagatatc acggagacac
     3961 tggcattaaa cattaaaatg attacgaatg ggattcactt aattgaagta aaacgttacc
     4021 caagttcata aaatgatcac aaatcacaaa ttttgatata cataatttgt gattttttat
     4081 attcaaagct aaaattgcaa aaaattaatg gttaacatct ctgttgttgt caatataaat
     4141 aatgattaat catttatgat gtaactaagg agatgaagga tatgaatcaa caattaattg
     4201 aaactttaaa atctaaagaa ggcaaaatga ttgagatcag acgttattta catcagcatc
     4261 cagaattatc ttttcatgaa gatgaaacgg cgaaatacat cgctgaattt tacaaaggta
     4321 aagatgtgga agtagaaacg aatgtcggac cacgtggaat taaagtaacg attgattcag
     4381 ggaaacctgg taaaacatta gcaatccgtg cagactttga tgcattacct attactgaag
     4441 atacaggatt atcttttgca tcacaaaata aaggtgttat gcacgcatgt ggtcacgatg
     4501 cacatacagc atacatgctt gtattagcag agacgcttgc tgaaatgaaa gatagtttta
     4561 caggaaaagt cgttgtgata catcaaccag ctgaagaagt accaccaggt ggtgctaaag
     4621 caatgattga aaatggtgca ttagacggtg ttgatcatgt attaggtgta cacgtcatga
     4681 gcacaatgaa aacaggtaat gtgtattaca gacctggtta tgttcaaaca ggacgcgcat
     4741 tcttcaaatt gaaagttcaa ggtaaaggtg gtcatggttc atcaccacat atggccaatg
     4801 atgccattgt tgcaggtagc tacttcgtca cagcgttaca aacagttgta tctagacgac
     4861 taagtccatt tgaaaccggt gttgtcacaa tcggttcatt tgacggtaaa ggtcaattca
     4921 atgtcattaa agatgttgtt gaaattgaag gtgatgtacg tggattaaca gatgctacaa
     4981 aagcaacaat tgaaaaagaa attaaccgtt tatcaaaagg cttagaggat atgtatggtg
     5041 taacttgcac cttagaatat aacgatgatt atcctgcatt atataatgat ccagagttta
     5101 ctgagtacgt ggctaagacg ttaaaagaag cagaccttga atttggtgtc gaaatatgtg
     5161 aaccacaacc accttcagaa gactttgcat actatgctaa agaacgtcca agtgccttta
     5221 tttatacagg tgcagcggtg gaagatggtg aaatttaccc acatcatcat cctaaattta
     5281 acatttcaga aaaatcatta cttatttcgg cagaagctgt agggacagtt gttttagatt
     5341 accttaaagg agataactaa catgaatgaa acgtatcgcg ggggcaacaa gttaatctta
     5401 ggtattgtat taggtgttat tacattttgg ttgtttgcac aatcacttgt aaatgttgta
     5461 ccaaatttac aacaaagttt tggtgcagac atgggaacaa ttagtattgc ggtaagtcta
     5521 accgcactat tttcaggcat gtttgttgtt ggagcaggcg gcctagcaga taaaattgga
     5581 cgcgtgaaaa tgacaaatat cggcttatta ttaagtatta ttggttcagc attaattatt
     5641 attacaaatt taccagcatt gttaatttta ggtcgtatta tacaaggcgt atcagcagcg
     5701 tgtattatgc cttccacatt ggccattatg aaaacttatt atgagggtgc tgaacgtcag
     5761 cgcgccttaa gctactggtc tatcggttct tggggtggaa gtggtatctg ttcactcttc
     5821 ggtggggcag ttgcgacaac tatgggttgg agatggattt tcatcttctc aattatcgtt
     5881 gccgtacttt caatgttact catcaaaggg acgcctgaaa cgaaatcaga agttaccaat
     5941 acacataaat ttgacgttgc agggctaatt gttctagtag ttatgttgct aagtttaaac
     6001 gttgtcatta ctaaaggtgc agcacttggt tacacatcat tatggttctt tggtttgatt
     6061 gcaatcgtaa ttgtagcatt ctttattttc ttaaaagttg agaaaaaagt agataatccg
     6121 cttattgatt ttaaattatt tgaaaataaa ccatatacag gtgcaacgat ttcgaacttc
     6181 ttattaaacg gtgttgcagg tacattaatt gtagcgaata cattcgtgca acaaggttta
     6241 ggttatacag cattgcaggc aggatactta tcaatcactt atttaattat ggtgttattg
     6301 atgattcgag ttggtgaaaa attattacaa aaaatgggtt ctaagcgacc aatgttatta
     6361 ggtacattca ttgtggtcat tggtattgca cttatttcat tagtattctt accaggcata
     6421 ttttatgtta tcagttgtgt cgtaggatat ttatgtttcg gactaggctt aggtatttat
     6481 gcaacacctt ctacagatac agctatttcg aatgcaccgt tagataaagt tggcgttgct
     6541 tcaggtattt ataaaatggc ttcatcactt ggtggtgcat tcggtgtcgc aattagtggt
     6601 gcagtatatg ccggtgcagt tgctgcaacg agcattcata caggtgcgat gattgcactt
     6661 tgggttaacg tattaatggg gatcatggca tttatcgcaa ttttattcgc gattcctaat
     6721 gatgataaac gtgtcaaaga tgcgaaataa taacgatgac acgcccagtg ttttgataat
     6781 aatttaaatg aaagtaaagc aaattaaatg aggaaatgta tagagcagtg catatagata
     6841 aatctatgat tggattaaca ctaatataaa tataaatgaa aaaccatcca cttaaacttt
     6901 taataagtta ggtggatggt tatttattgc gttgttctaa aaattttgac acttatatgg
     6961 aaagaaatat atataatgtg aaggttatgg caattcgctt caatgaaggc gacgtgtaaa
     7021 agtgtatatt aaatgattcg aggtcagact ccgagaacag tgtccgtcat gcttaccgca
     7081 tactaatgaa gcatcattat atcagtgttt atagccgatt taagataata aattttgcta
     7141 aacaaaaaag ccaacccatg aatgttggat tggcttttta catgcatctg aatctctaat
     7201 tttaaaaaaa tatgaatata aataagatag taaaaattaa atttcagttg ttgcaatttc
     7261 ttcatctgta ggtacatcat cgttaaggcc aacaagtgct tcagaaacat ttcgtgaatg
     7321 ataaccgata cgttcaagaa caccaatcat gtcgatatat agtaatccgc cttttgttgt
     7381 acattcacca cgattaaggc gtttaatatg acctttgcgt agtttatgtt caatattaaa
     7441 tgattctcta ctacgttcta caatttcatc ttttttcgtt ttgtcataaa catctaacat
     7501 gtcgatggct ttatcaaatg attcggcaac atggttgaat aatttatcca taccgcgttg
     7561 tgcatcttct gtaatgcgaa tatcttcatc atgttggcgt tttaattgag cgacatactc
     7621 ttctgttagc tctgctactt ttaaaataga gcgattgaca tcaaacataa ctgctaaacg
     7681 ctcaacgtct gccttcgtaa tggcttttgt agaaattcta actaaataat ttcgaatact
     7741 atcattgatt gtttcaacag cttggtgctt ttgttcaagc tttttgatca attttttatc
     7801 gtcttttgta atttcgcgaa tgtcttcaaa cattgataag acaatctgac caacattttg
     7861 taattctttt tgagtttctt gtaatgcaac accaggtgcg tgataaacaa gatctttgtt
     7921 taagtgctga ggtttatagt catcagcaat atctttacct gggacaagct ttgtaactat
     7981 ccatgctaaa cctgctacaa atggtaattg aatcaaagta tttgttatgt tgaagatacc
     8041 atgtgatact gcaatcgtca tcgctggttt taagtgccat acatcttgta acaaactaat
     8101 caaatgaatc acaactggca agaaaattgt gaagataatt accccgatta agttaaagat
     8161 gacgtgtaca agcgccgcac gttttgcagc gattgagccg gctaaactag ctaagatagc
     8221 tgtaatcgtt gtaccaatat tatcgcctag taacacaggg attgctgcgt ttaagctgat
     8281 taaatcttgt tgataaaatt cttgtaaaat accaatcgtc gcacttgaac tttgaactag
     8341 tgctgttaac cctgcgccga caatgacagc aagtattgga tttgtagaca tatcaagcat
     8401 taattgctta aatccatcta atgatgctaa aggtttaacg gcatcaccca taaattctag
     8461 accgaagaat agagaaccga aaccgaatag tatgcggcca atgttattga ttttagagcg
     8521 cttaaagaaa aagattaaaa atgcacctaa tgctaaaatt ggcattgcat attcgcctaa
     8581 atctataccg ataataaatg cagttaccgt tgttccgata ttagcaccca ttatcactcc
     8641 aatggcttgt ttcaatgtca taaatccagc tgttaccagt ccgattgtga taactgtcgt
     8701 acctgaacta ctttgtatta aaatagttac aacgatacct gcaataacac ctaatactgg
     8761 atttgatgta aatttgttta aaatatctcg tagcctgtct cctgctgatg cttgaagccc
     8821 gtctcccatg atttttaagc cgtaaaggaa aatacctaaa ccacctaaaa aggagaaaat
     8881 gacttctgta accgacattt ccattatttc acctcaaata agctttatat ttagattatc
     8941 gcttataatt gtaaatttaa tgttaagatt aggtaaaatt atttaacaat atatgttatt
     9001 tgtatatgac ttgtaaaata tcatcactta ttatgtaaat tttcagtgtg aaatggcagg
     9061 tttgcaatca cttgtttaac aaaatgatgc aatcaatcat gtgacaatgt tttggcaata
     9121 aaaaatcatg agagtggaac aacgaaataa tttttatgaa aacatcattt ctgtcccagt
     9181 ctcatgattc gaaatcacca aataaaatta tttaatgtgc ctcgttataa caatttgtgt
     9241 tcttttaata atgtctcaat gtacgtacct tttatctttt taaggaatcc tgctaatgcg
     9301 agtttttgca ttttcgaatc tttagtaatc tcgcgcaaat cttgatggtc attcagttcg
     9361 tatatggcat ccattaagac gcgaagatca aatgtactat tgatgacctc tggaatacca
     9421 cgatttatat ttagtaattg ataaacagct tccatggcag tacgaaccga atattctgtt
     9481 gtaaatacag tatctcgctc tgtttctgca aagttaccaa taaatgctaa attttgtgat
     9541 tgatgcggaa cgactaaagg tctgtcgccg atagcacgcg tcatgaaata agaggtaata
     9601 tatggcatat aaacaggaat cgtattagat gcatgttttg ctaagtcttc aattttgtca
     9661 gttggtacac ctaagtgata cagccattct tgacatattt cattaccact acattctgtg
     9721 attggctttt taatataatc gccatttaca tctgaatata aggcataaat ccatgtagat
     9781 atttcatttt taggttggtc tttaaactgt tgctgacgat tgattgtaaa actgatttgc
     9841 catgcagaat cattgattgt aataattcca ccagtaaccg ttttgcctgc aagtggatca
     9901 cgtttacaaa tgctttctat tgtatcgata atatctttat tgttagttgt cgatgttgca
     9961 gaaacaaacc aacttttttg aggaatattt tggcaaaact tatcaggatt accaaattca
    10021 ggactttgtc gcgctaaatt tttccatagt gtccaactac cacctaattc gtcagttggt
    10081 ggtgctggtg tatcattatc accatacgta gagctttccg taatactacc gtttgtcaca
    10141 aagacaagat catctacagt cagtttaatt gactctgctt tgccatgtcg gtgaattaat
    10201 atttctcggg caattttttg acttgtcgta acatctactt taatatcttc tacttttaca
    10261 tcgtattcaa attgaacccc atgcgatttt aaatattcaa ccataggtaa tactaaagat
    10321 tcatattgat tatatttagt gaattttaaa gctgaaaagt ctgcgagacc accaatatga
    10381 tgaacgaatc gcattagata gcgacgcatt tccattgcag aatgccacgg ttcaaatgca
    10441 aacatcgttt tccagtaaat ccaaaagttt gaattaaaga agtcatcgga aaatacatct
    10501 gttattttga catcatctaa atcttcttca ttcgttaagc ataaatctaa aatttcttta
    10561 atcgcttttt tggtcaaagt gaagtctcca tcggtaacta aacgttgacc ctgtttttca
    10621 ataactcgac agcgagaata gttagggtct tctttgttta gccaatagaa ctcatctaat
    10681 acagacgcgt tatcgatttc taatgaaggg atagatctga ataagtccca caaacattca
    10741 aagtggttct ccatttcacg accacctcgg acaacatagc cttttaaagg catattttca
    10801 ccatcaagac taccacctgc tttaggtaac tcttctaaaa tatgaatctt cgaaccttcc
    10861 atttgaccat ccctaattaa gaaacaagct gccgcaagtg aagctaaccc agacccgatt
    10921 aaataagcag atttgttttc tacattttca ggttttttag ggcgcgcaaa tgcttcataa
    10981 tttccataac tgtaatacat atccaccaag tcctttcgta ttagaataca ctcagactat
    11041 acccctttgt gaattgcaaa tattagtatt tatattggta aatttgacga aattagatca
    11101 tttttatatt tttgatttta aaaattttat cactcgaatg tttttggatt ctgaggtgcg
    11161 ggacttggaa taattcgaat cattatgtgg catgttaaac agctaaatat aagctatgca
    11221 catttaacaa gcggatactc ctgacgcaat tatagtatca ttacatattg tttaatcgtt
    11281 tggggtaatg taattaaaag gtaaaatagg cagagtgtta tacataaaat gtaaagaaag
    11341 aggcgataga atgtctaaaa tcaggtcttt tacaatatta agtctactta tttacttagc
    11401 tatgacgtgc tatacagtag tgacctatcc aaaattacca accaaagtgc ctattcatta
    11461 taatttagca ggggatgctg ataactttgc tgataaatgg gtactgcttt tgattaatag
    11521 tgcatttata gtgatttggc ttatattttt cattgcaggt agatactatg aacgatttgc
    11581 caaatggtca cattataatc atacaccacg tgaaattcga gcgattaaat tatttttaag
    11641 tacgttaaat ttagagatta tgagctatat gtctatcttc acagtattag aaatttggca
    11701 aatacaacac catcatcaat tcaatttact atggtttaat atgatattta tcattatcat
    11761 tggtttgacg cttgtcatat tttgtttact tcctacaatt cataaaatga gagattctca
    11821 ataaaaatat aaactgtcat gatg
//
LOCUS       DAKPJH010000076        11774 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.076, whole genome shotgun sequence.
ACCESSION   DAKPJH010000076 DAKPJH010000000
VERSION     DAKPJH010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11774
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.076"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(19..846)
                     /locus_tag="OY092_001837"
     CDS             complement(19..846)
                     /locus_tag="OY092_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076778.1"
                     /translation="MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMG
                     DLPGQGQISRANKGQIENFQTYHESLLDWLKIANEYKIPTYVLGVGLGGLILLNLLEK
                     VELPIEGMMLISPMLELQKNGKNRKDKLVSNIGKISKDARFNVGVEPKDLTRNLEIVE
                     ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEF
                     KEKYQTPELYFKAWQGFYHEVHNEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI"
     gene            complement(849..968)
                     /locus_tag="OY092_001838"
     CDS             complement(849..968)
                     /locus_tag="OY092_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076779.1"
                     /translation="MMLISFIYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV"
     gene            1080..2081
                     /locus_tag="OY092_001839"
     CDS             1080..2081
                     /locus_tag="OY092_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase"
                     /protein_id="HCX1076780.1"
                     /translation="MALLKNFFIGLSNNSFLNNAAKKVGPRLGANKVVAGNTIPELIN
                     TIEYLNDKNIAVTVDNLGEFVGTVEESNHAKEQILTIMDALHQHGVKAHMSVKLSQLG
                     AEFDLELAYQNLREILLKANTYNNMHINIDTEKYASLQQIVQVLDRLKGEFRNVGTVI
                     QAYLYDSHELVDKYQDLRLRLVKGAYKENESIAFQSKEDVDANYIKIIEQRLLNARNF
                     TSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYNFTIYVPYG
                     DDWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGATVMLGLSTIKKLCRK"
     gene            complement(2203..2667)
                     /locus_tag="OY092_001840"
     CDS             complement(2203..2667)
                     /locus_tag="OY092_001840"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HCX1076781.1"
                     /translation="MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNE
                     DNIDVAFVPGAFEIPLVAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKV
                     NDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA"
     gene            complement(2680..3861)
                     /gene="ribB"
                     /locus_tag="OY092_001841"
     CDS             complement(2680..3861)
                     /gene="ribB"
                     /locus_tag="OY092_001841"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HCX1076782.1"
                     /translation="MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNT
                     INFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYE
                     RTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGV
                     ICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFG
                     TFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMK
                     YINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQ
                     ILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL
                     I"
     gene            complement(3872..4504)
                     /locus_tag="OY092_001842"
     CDS             complement(3872..4504)
                     /locus_tag="OY092_001842"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HCX1076783.1"
                     /translation="MFTGIVEEIGVVKSVQIRQSVRTIEIEAHKITADMHIGDSISVN
                     GACLTVIDFNQTSFTVQVIKGTENKTYLADVKRQSEVNLERAMSGNGRFGGHFVLGHV
                     DELGTVSKINETANAKIITIQCSQHINNQLVKQGSITVDGVSLTVFDKHDNSFDIHLI
                     PETRRSTILSSKKLGDKVHLETDVLFKYVENILNKDKDQLSVDKLRAFGF"
     gene            complement(4511..5554)
                     /gene="ribD"
                     /locus_tag="OY092_001843"
     CDS             complement(4511..5554)
                     /gene="ribD"
                     /locus_tag="OY092_001843"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HCX1076784.1"
                     /translation="MSQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRK
                     GDKHAEVQALDMAQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKDNS
                     LDTHGDETLRAHGIEVECVDDERASQLYQDFFKAKAKQLPQITVKVSASLDGKQANDN
                     GQSQWITNKEVKQDVYKLRHRHDAVLTGRRTVELDDPQYTTRIQDGKNPIKVILSKSG
                     NIHFNQQIYQDESTPIWIYTENPNLTTKQTHIEIIFLESCDLTTILHNLYKRGVGTLL
                     VEAGPTTTSEFLQSNYIDEFILYYAPKLIGGSGNYQFYQTNDVIEIPDANQFEIVHSE
                     LLNQNVKLTLRKK"
     regulatory      complement(5681..5816)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(6035..7537)
                     /locus_tag="OY092_001844"
     CDS             complement(6035..7537)
                     /locus_tag="OY092_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HCX1076785.1"
                     /translation="MRVAIIGMGTAGVSVLRELVKHPKFNQLDIDLYDDKVNMGQGVP
                     FQNDSSELLINMPSKKMSLNLDDETEFWKWYKQQTDFNFDEPAYLPRFVFGHYMKSYL
                     SMFTKKYPNISTNYNKVQEIYTNSNIDETNLTYYICTTNSGQSWQAYDYVFLTCGTFA
                     YHDPYNLKGKKGYIATPYPTYNTLDEVNELDDIAIIGTGLASLDVVRYVAAHHPKLPI
                     TMTSRSAHLPGVRGTMIDVTFKYLTKDKLNDIKKHHFGNAPLDTLVSLFLKECAEYDI
                     DFKKLVHRRTGNHIADLKYDLARPTEMGIFQSMIEHLKENLNWIWNSLSIEDQHQFNQ
                     KYSKMIQLNSNPMPPRTAELIIELIENKSLILKKDLEDVKHDGKLYYFSYKNQESVDI
                     YNVVINATGAKSHLNELDQDDQLIKNLENRQIVQAHPMGGIQIIPETNQVISPRFGTL
                     TNMIAIGQMTNGVNKLRNGVKMIVEQVAHTVSQLYDALESNEQQQRSDNQ"
     gene            8064..8378
                     /locus_tag="OY092_001845"
     CDS             8064..8378
                     /locus_tag="OY092_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCX1076786.1"
                     /translation="MTYKELATYLKVLSDSSRLEILDLLSCGELCACDLLEHFQFSQP
                     TLSYHMKALVKTNLVTTRKIGNKHLYQLNHNIFESVINNLSKVHTSNQRCICHNLKTG
                     EC"
     gene            8378..9670
                     /gene="arsB"
                     /locus_tag="OY092_001846"
     CDS             8378..9670
                     /gene="arsB"
                     /locus_tag="OY092_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter membrane subunit
                     ArsB"
                     /protein_id="HCX1076787.1"
                     /translation="MMTTLATLIFLVTLLFVLWQPKGLDIGFTALAGAIVAMITGVVS
                     LTDVFEVTGIVWNATLTFVSVILISLILDKIGFFEWSAIHMLHASKGNGLKMFVYIIL
                     LGAVVAAFFANDGSALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSN
                     LVNIISADYFNISFSQYLSRMIIPNLFSLLGSLLVLWLYFRKAIPKSFDANHIKKPKD
                     AINDLKLFKISWIVLVILLFGYLISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQV
                     IKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILGMGFISAFLS
                     SIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVL
                     TQKDVKISWGTYFKTGITITIPVLFITLLGLYLTLIIF"
     gene            9688..10083
                     /gene="arsC"
                     /locus_tag="OY092_001847"
     CDS             9688..10083
                     /gene="arsC"
                     /locus_tag="OY092_001847"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (thioredoxin)"
                     /protein_id="HCX1076788.1"
                     /translation="MTKKTIYFICTGNSCRSQMAEGWAKQILAKDWDVYSAGIETHGV
                     NPKAIEAMKEVGIDISNHTSDLIDNNIIKNSNLVVTLCSDADVNCPTLPTNVKKEHWG
                     FDDPAGKPWSEFQRVRDEIKVAIENFKSR"
     gene            complement(10713..>11774)
                     /locus_tag="OY092_001848"
     CDS             complement(10713..>11774)
                     /locus_tag="OY092_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1076789.1"
                     /translation="LPLIIKDLNIDGDAFGILIAVFSLFQMIFSPIVGFFSDRYAKKH
                     FLSIGLLLYIVSEFLFGIGMGFYTLLSSRILGGISAALIQTSVIGIIGDISDEANRDK
                     NFGTFSAITSLGFIIGPGIGALFATFHLRLPYFIAMAIGIIMLIINLNLKIPHVQTLA
                     SKENKLATLSFKYLKLYLLPAMVILLLAFGLAAIEELYPLYLVDKADFTSFHIALAII
                     GGSLLGALTQYLVYPKISRHLHEFSIIIISSIYSIMVLCILLLLNSVIALVLISCVIF
                     IGFDIIRPAITVYLSKIAKDKQGLAGSMNSTFTSLGTLIAPIIAGYFYVQNINAPVYI
                     AILTIILTIIALIFLPKKE"
BASE COUNT         3874 a         2079 c         1718 g         4103 t
ORIGIN      
        1 tctcatcttt ttagaatatt aaatttctac aatttcgtca tcttcaacaa taaagcccat
       61 tgtattgacg ctattattta agaaagtcag aatataacgc attacttcat cgcgttctgg
      121 ctcattgtga acctcgtggt aaaaaccttg ccaagcttta aaatataatt caggtgtttg
      181 atatttttct ttaaactcat caattgccct agtatcaaca attaaatcct tcgttccata
      241 cattaatagc gttggcattg gttgaatgtc atgaatatga gccatcgtat ctttcatcgt
      301 ctcattaatt gtattatacc aatgatacgt tgcttttttt aacattaaac catcgttaac
      361 tgtttcttca acaatttcta aattacgtgt taaatctttt ggttctacac caacattaaa
      421 acgtgcgtct tttgaaattt tacctatatt tgaaacaagt ttatctttac gattttttcc
      481 attcttttga agttctagca taggagaaat taacatcatc ccctcgattg gcaattctac
      541 tttttcaagt aaatttaata aaatcaaacc gccaagtcct acccctaata cataagtagg
      601 aattttatat tcattagcta tctttaacca atctagcaaa ctttcgtgat acgtttgaaa
      661 gttttcaatt tgtcctttat tagctcttga aatttgacct tgaccaggca aatctcccat
      721 aatcacatga tagccatttc ttcttaacat cgtaataaca tatgcatatc ttcccgtatg
      781 ttctaatata ttatgagcaa taacaacgac gcctttcgca tcattttcag cttcccactt
      841 ccacattatt atactgcccc tttttcatta atcttcaata acataattat agcaaattca
      901 ctatgtagat ttctatttat agtattattg ttgtccatat tattatatat aaatgaaatc
      961 aacatcaata atagtgtaat tatacataat tagttttgat tgtttttgat gaaaacgctt
     1021 tctcgaatat ttttttcatg ctaaacttat tgtaaacaca agggtttgga ggagtagcaa
     1081 tggcactatt aaagaatttt tttatcggat tatctaataa tagtttttta aacaacgcag
     1141 caaaaaaagt gggcccacgt ttgggcgcca ataaagtcgt tgccggaaat acaattccag
     1201 agttaattaa tacaatcgaa tacttaaatg acaagaatat cgctgttacg gtagacaatt
     1261 taggggaatt tgtcggtaca gttgaagaaa gtaatcatgc taaagaacaa attttaacaa
     1321 ttatggacgc gcttcatcaa catggcgtaa aggcacatat gtctgttaaa ttgagtcagt
     1381 taggtgcaga attcgactta gaattagctt accaaaattt aagagagatt ttacttaaag
     1441 caaatactta caacaatatg catataaata ttgatactga aaaatatgct agcctgcaac
     1501 aaattgttca agttttagat cgcttaaaag gcgaatttag aaatgttggt actgtaattc
     1561 aagcatattt atacgatagc catgaattag ttgataagta ccaagattta cgattacgtt
     1621 tggttaaagg tgcatataaa gaaaacgaat caattgcatt tcaatctaag gaagacgtag
     1681 atgcaaatta catcaaaata attgaacaac gtttgttaaa cgcacgcaat ttcacttcaa
     1741 ttgcaacaca tgaccatcgc atcattaatc atgtaaaaca atttatgaaa gaaaatcaca
     1801 ttgaaaaaga tcgtatggaa ttccaaatgc tctatggttt tagatcagag ttagcagaag
     1861 aaatcgcaaa tgaaggctat aatttcacta tttatgtacc ttatggcgat gattggtttg
     1921 cgtattttat gagaagatta gcagaacgcc cacaaaacct atctcttgct gtaaaagaat
     1981 ttgtgaaacc tgctggctta aaacgtgttg gcataattgc agctttagga gctacagtta
     2041 tgttaggttt aagtacaatt aaaaaattat gccgtaaata gagcatggca taaacaataa
     2101 tttaggagtc tggaacaata atcaatgttc taggctccta aatgttatat tggcagttct
     2161 gaatcattta taaatctttg attatgaact cacaacagcg ctctatgctt ttatagattt
     2221 taataaatta gccatttcaa ttgcacttac tgctgcttcg gcacctttat tgccagcttt
     2281 cgtacctgct ctttccacag cttgttcaat actttcagtc gttaaaatac caaatatgac
     2341 tggtacatta gtttgatcat ttactttaga aacacctttc gcgacttcat tacaaacata
     2401 atcataatga gacgtagcac cgcgaattac gcatcctaat gtaattactg catcataatt
     2461 tcctgatgag gctaatttct tagctactaa aggaatttca aacgcaccag gaacaaatgc
     2521 tacatcaata ttgtcttcat taacatcatg tcgaatcaaa gtatcttttg caccttcaag
     2581 taatcttcca gtgataaaat cattaaatcg actaactacg attgcaactt tcaaatcttt
     2641 tccaattaat ttaccttcaa aattcatgtt aaagtcctcc tatattaaat gacccatttt
     2701 tatttttttc gtttccatat aatcatgatt atgtaccgtt tctggtacga taacttcaat
     2761 tctttctgca atatcaatgc catattgttt taatccctca aatttacttg gattattact
     2821 taataaattg atatgttcga tgttaaaata ttttaaaatc tgtgcagcaa tatgataatc
     2881 tcgtaaatct tcatcaaaac ctaatgctaa atttgcagtt actgtatcat atccttgctc
     2941 aattaattca tatgcgcgta atttgtttaa caatcctatg ccacgacctt cttgaggtag
     3001 ataaataatc atgccaccat gttcattgat atacttcata gacgattcaa gttgagcacc
     3061 acaatcacaa cgttgactat ggaaaatatc gcctgtaagg cacgcagaat gtaagcgtac
     3121 attttcatgt tgtcgaattg caccttttgt cagtacaact atctcttcat ctgtgtatgt
     3181 cgctttaaaa ccatacatat caaatgttcc gaaatctgta ggcattttca cttttgcctt
     3241 aaattcaatt tctggttcta attttttacg atattcaatt aaatcatcaa tcgtaatcat
     3301 ctttaattga tgtttttctt taaacttttg taaatcttgt cctttcgcca tcgtgccgtc
     3361 atcattcata atctcacaaa tgacaccagc gggcttggca ccagtaagtt tagctaaatc
     3421 aacagccgct tctgtgtgtc catttctagc taatacgcct ttatcttgtg ctactaatgg
     3481 aaataaatga ccaggacgat taaaatcttt agcttcacta ctaggatcaa tgagcttttt
     3541 ggcagtcaat gtacgttcat aagcactaat tcctgttgtt gtatctacat gatcaatact
     3601 cactgtaaat tgcgtaccaa agatgtcgga gttatcatca accatttgta ccaaatccaa
     3661 acgttgtgca atatctttag acactggtgc gcatattaat ccccttgctt ctttcgccat
     3721 aaaattaatg gtattatcgt tcatccattc agtaaccgct actaaatcac cttcattttc
     3781 acgattctca tcatctacta caataattgt ttctccattt tttaaagcca ttaaagcact
     3841 gtcaatatta tcgaattgca tgctacccct cctaaaaacc aaatgctctt aatttatcta
     3901 cagataattg gtctttatct ttatttaaaa tattttcaac atatttaaac aaaacgtctg
     3961 tttctaaatg tactttatct cctaattttt tggatgataa aatcgttgaa cgcctcgttt
     4021 ctggaataag atgaatgtca aaactgttat catgcttatc aaataccgtt agactaacac
     4081 catccacagt aatagaccct tgcttaacta actgattatt aatatgttgg ctacattgaa
     4141 tcgtaataat tttggcattg gctgtttcat ttatttttga aactgttcct agttcatcta
     4201 catgaccgag gacaaaatgt ccaccaaacc taccgttacc actcatggca cgctctaaat
     4261 ttacttctga ttgtcgctta acatctgcta aataggtttt attttcagtg cctttaatta
     4321 cttgaacagt aaaagatgtc tgattaaaat caatcactgt taaacatgca ccattaacac
     4381 tgatggaatc accaatatgc atatctgccg taatcttatg tgcttcaatt tcaatcgtcc
     4441 tgactgattg acgaatttga acacttttaa cgacacctat ttcttcaacg atgccagtaa
     4501 acatgcatca tcacttcttt cgtaaagtta atttaacatt ttgatttaat aactcggaat
     4561 gaacaatttc aaattggttc gcatctggta tctcaatcac atcatttgtt tgataaaatt
     4621 gataatttcc agatccgcca attaatttcg gggcataata gagaataaat tcatctatat
     4681 aattagattg gagaaattct gaagtagtgg ttggacctgc ctcgactagc aaagttccaa
     4741 ctcctctttt atataaattg tgaagaattg ttgttaaatc acaagactcc aagaaaataa
     4801 tttcaatatg tgtttgcttg gttgttaaat ttggattttc agtatatatc caaattggtg
     4861 ttgattcatc ttgataaatt tgctgattaa aatgaatatt cccagactta gacaatatta
     4921 cttttatagg gttttttcca tcttgaatac gtgtagtata ttgtggatca tctaattcaa
     4981 ctgtacgtct tccagttaac actgcgtcgt gtcgatgtct taacttatag acatcttgtt
     5041 taacctcttt gttagtaatc cattgacttt gtccattatc attcgcttgt ttaccatcta
     5101 aacttgcaga tactttcact gtaatttgtg gcagttgctt tgcttttgct ttaaaaaagt
     5161 cttggtataa ttgtgatgca cgttcatcat caacgcattc aacctcaata ccgtgagccc
     5221 gtaacgtctc atcaccatgt gtgtctaacg aattgtcttt tgttgcgtaa actactttag
     5281 ttatcttaca atcaataatt ttgttaacac agggtggtgt tgaaccaaaa tgactacatg
     5341 gctctaacgt aatataaatc gtcgcacctt cagcattttg ttgtgccata tcaagtgctt
     5401 gaacctccgc atgcttgtca ccttttctca agtgtgcacc aataccaaca atcctacctt
     5461 ctttaactac aacagcgcca acgggtggat taacacctgt ttgaccttgt accatatttg
     5521 caagttgaat cgcataatcc ataaattgac tcaaatgatc acctctataa acaaaaatcc
     5581 tcacatcatg aattaagatg caaggagaaa aatttatcgt taaataagcc tatttgtaca
     5641 catttttaca aatacgctac attatctttg tcgataatta acattctttc tcccatccag
     5701 actttaactg tcggctctag aatctcacta gatcagccac taatatgaaa catattagca
     5761 ggtcgcaggc tttatttact gccggttggg aatttcaccc tgccccgaaa gaattatata
     5821 tgaaattgtt atagattatt tgagtacgta gtatgtcaac tacatttaaa atgatactat
     5881 atgttttctg aaaaaacaat taatgacggt tttaatttaa tataatctga gtactatagg
     5941 catctcattg atatgattct tactaacaga cattaaaatc aaaccttcaa ttcgtctcta
     6001 tagagcgttc tctttattat cttctagtta caaattattg attgtcactg cgctgttgtt
     6061 gctcattcga ttctaaagca tcatataatt gagatactgt atgcgcaact tgttctacta
     6121 tcattttcac accatttcgt agtttattaa caccgtttgt catttgacct atcgcaatca
     6181 tatttgttaa tgttccaaac cttggactaa taacttgatt ggtttccggt atgatttgta
     6241 tgcctcccat tgggtgtgct tgtacaattt gtctattttc aagattttta attaattgat
     6301 catcttgatc caattcattt aaatgacttt ttgcacctgt cgcgttaatg acaacattat
     6361 atatgtctac tgattcttgg tttttgtatg aaaaataata caacttgcca tcatgtttca
     6421 catcttctaa atcttttttc aaaattaaag acttattttc tattaattca ataattagtt
     6481 cagcagttct tggaggcatt ggatttgaat ttaattgaat catctttgag tatttttgat
     6541 taaattgatg ttgatcttca atacttaagc tattccatat ccaatttaaa ttctctttca
     6601 aatgttcaat catactttgg aaaatgccca tttctgttgg acgcgctaaa tcatacttca
     6661 aatctgcaat atgatttcct gtacgtctat gtactaattt tttaaaatca atgtcatatt
     6721 cagcacattc ttttaaaaat aaagaaacta aagtatcaag cggtgcattg ccgaaatgat
     6781 gttttttaat gtcatttaat ttgtctttag ttaagtactt gaatgtcacg tctatcattg
     6841 tacctcttac acctggtaaa tgagcagaac gactcgtcat agtaattggt aatttcggat
     6901 gatgagcagc aacataacgg acaacatcta aactggcaag gcctgtacca ataatcgcaa
     6961 tatcgtccag ttcatttact tcgtctaacg tattatatgt tggataaggc gtagcgatat
     7021 atcctttttt accctttaag ttatatggat catggtaggc aaatgtacca catgttaaaa
     7081 atacataatc gtacgcttgc catgattgtc ctgaatttgt agtacatatg taataagtta
     7141 aattcgtttc atcgatatta gaatttgtat aaatctcttg aactttatta taattagttg
     7201 atatatttgg atattttttc gtgaacatag ataaataaga tttcatataa tgtccgaata
     7261 caaatctcgg taaatatgca ggttcatcaa aattaaaatc agtttgttgt ttataccact
     7321 tccaaaattc agtctcatca tctaaattta aactcatctt tttcgaaggc atattaatta
     7381 gcagctcaga actatcattt tgaaatggta cgccctgtcc catatttact ttatcatcgt
     7441 ataaatctat atctaattga ttaaacttcg ggtgcttaac taactctctc aatacactta
     7501 caccagcagt tcccatgcct attattgcta cacgcatata tcatccatcc ttttgtaatt
     7561 caaaatatta tatttaaact attacctata attatagcaa tttggtattt ccaataaaat
     7621 ttattaaggt aagctattat ttcactttca caaccattaa accatttaaa acttttcatt
     7681 taatatcaac ctcagtgttt gtgttaaaat atttttaccg aggtgaatta aattgaaatt
     7741 tatagcaaag atattaatct cattagtaat tctatttatg atttttagtc gtaaaaacaa
     7801 agcatcttaa tcaataccct tgattacaaa ataaattcaa ctaaggtgat tggccataca
     7861 ctcaagatat ggcaaatcac ctttttcatt acgtaaattc aaccatcctt tagcaaaatt
     7921 ttaaccatac attttcacaa gtaataattt ttaacaatgc tattagcatc acagtgacaa
     7981 atgactaacg aaacattaaa gcaatcatac atagacattc atatatatag atgatagtct
     8041 atttaacgtc taggaggtat gttatgacgt ataaagaact agcaacatat ttaaaagttt
     8101 tgtcagattc aagcagatta gaaatactag atttactttc ttgtggagag ttatgcgctt
     8161 gtgatttgtt agaacatttt caattctctc aacctacact tagctatcat atgaaagcat
     8221 tagtaaaaac caacttagtt acgacacgaa aaatcggaaa taaacattta tatcagctta
     8281 atcataatat ttttgagtcc gtaattaata acttgtcaaa ggttcatacc tctaaccaac
     8341 gatgtatttg tcataacctt aagactggtg aatgctaatg atgacaactt tagcgacact
     8401 catttttcta gtaactttat tatttgtatt atggcaacct aaaggcctag atattggatt
     8461 tactgcatta gcaggtgcaa ttgttgcaat gattactggt gttgtaagtt tgactgatgt
     8521 ttttgaagta acaggtatag tctggaatgc cactttaact tttgtctcag tcattcttat
     8581 ttcattaata ttagataaaa ttggattttt tgaatggtca gctatccata tgcttcatgc
     8641 ttcaaaaggc aatggtttaa aaatgttcgt ttatatcata ttattgggtg ccgtggttgc
     8701 tgcatttttc gcaaatgatg gctcagcgtt aatcttaacg ccaattgtat tagcaatggt
     8761 aaaaaatata ggttttagta agcgggcaat attccctttt attattgcga gtggttttat
     8821 agctgataca acttctttac ctttaatcgt gagcaatttg gtcaatatca tttctgcaga
     8881 ttactttaac attagtttct ctcagtatct cagtagaatg attatcccta atttattctc
     8941 attattaggc agccttctag ttttgtggtt atattttaga aaagcgattc ctaaatcatt
     9001 tgatgcaaat cacataaaaa aacctaaaga tgccattaat gatttaaagc tatttaaaat
     9061 ttcatggatt gttctagtta tattactttt cggctatcta atcagtgaat ttactaaaat
     9121 tccggtatca attttcactg ggatcatagc ttttatattt ctaatgttgg ctcgtaaatc
     9181 aaatgctgta aatattaagc aagtcattaa gggcgcacct tggaatatag tattattttc
     9241 aattggtatg tatatcgtcg tattcggctt aagaaatgct ggcattactt taatattggc
     9301 taaaatatta gaatatattt ccaattacgg tctatttagc accattttgg gaatgggctt
     9361 catttcagcg tttttatcat caataatgaa taatatgcct acagttttaa tagatgcgat
     9421 tgctattggt caatcaaatg tccatggcat gttaaaagaa ggcctaattt atgcgaatgt
     9481 tatcggttct gatttaggtc caaaaattac accgataggc tctttagcta cattactgtg
     9541 gttacatgtc ttaacacaaa aagatgttaa gatttcttgg ggcacatact ttaaaactgg
     9601 tatcaccatt acaattccag tactatttat cacactttta ggattatatc taacacttat
     9661 catattttaa gaaattagga gattgttatg actaaaaaaa caatttattt tatatgtaca
     9721 ggcaactcat gtcgaagtca aatggctgaa ggttgggcta aacaaatctt agcgaaagat
     9781 tgggatgtat attctgcggg tatcgaaaca cacggtgtta atcccaaagc gatagaagct
     9841 atgaaagaag taggcattga tatatcaaat catacatcag atttaatcga taataatatt
     9901 attaaaaatt caaatttagt tgttacatta tgtagtgatg cagacgtaaa ttgccctact
     9961 ttaccaacaa atgttaagaa ggaacattgg ggatttgatg atcctgcagg caaaccatgg
    10021 tcagagttcc aacgtgtgag agatgaaatt aaagtcgcaa ttgaaaattt taaatcacga
    10081 tgagagtggg acagaaatga taaaaaaaca cttatgattt attatgtagt ggctctttat
    10141 cattagctat aactaatgtg tacttaaaaa taggaataca tgagtaaaac tcatgcataa
    10201 gaaatactaa tttctataga agaagtaact cttcatcgat gtcctacccc aacttgcatt
    10261 gcctgtagaa attggtgttc caattcctct atgttagggt cccgccaact tgcattgttt
    10321 gtatacctac tttttgtcaa cttctatgtt gggtcccact tgcattggcg gaattatcaa
    10381 tcaatatctt tctttaatag gcaatgtgtc aagctaaaac tgaaatttct tcaaaaaaat
    10441 taaaaaaagt tgttagacag aaattgaaca gaataacagt ggatttttta agtttaaaac
    10501 aaaataaaag gaaagctttg agaagctctc cgaaataaat ttacaaaaaa atacaattta
    10561 aatgtcttct cctgaacgcg ctcactgtga aacattcgct tgtcctacca ttaaaaagag
    10621 ttatgttttt aacggctcac gcccaaacat aactctttat taatggtcac aagggggaaa
    10681 cactcaatac cgtacctatt tcttattgac cattattctt tttttggcaa aaaaatcaaa
    10741 gcaattatcg ttaaaattat cgtcagaata gcgatataaa ctggcgcatt tatgttttgt
    10801 acgtaaaagt aacctgcaat aatgggggca attaacgtac ctaaagatgt aaaggttgag
    10861 ttcatagaac ctgctaaacc ttgcttatct tttgcgattt ttgataaata tacagtaatt
    10921 gctggccgta taatatcaaa gcctataaaa ataacacaac taattaaaac aagtgctatg
    10981 acagaattta agagtaacaa aatacataat accattattg aataaataga gctaatgata
    11041 ataatagaaa actcatgtaa atgccttgag attttaggat aaaccaaata ttgtgttagc
    11101 gcccccaaca atgaaccacc gataatagca agggcaatat gaaacgaagt aaagtctgcc
    11161 ttatctacga gatataacgg atacaattct tcaatcgcag ctaatccgaa agctaataaa
    11221 agtatcacca tcgctggtaa taaataaagt ttcaaatatt taaatgataa agttgctaat
    11281 ttattttctt ttgatgccaa tgtttgaaca tgtggtattt tcaaatttaa attaattatt
    11341 aacataatga tacctatagc catagctata aaatacggta gtctaagatg aaatgtagca
    11401 aacaatgcgc ctataccagg gcctatgata aagcctaatg acgtgattgc tgaaaacgtg
    11461 ccgaaatttt tatcgcgatt agcttcatca gatatgtcac caataatacc aataacggaa
    11521 gtttggatta acgccgcact tataccaccg agtatcctcg aagacaaaag tgtatagaac
    11581 cccataccaa ttccaaataa aaattcagaa acgatataaa gtaacaagcc aatagataaa
    11641 aagtgctttt tagcgtatct atcagaaaaa aagccaacta taggcgaaaa aatcatttga
    11701 aaaagagaaa atacagcaat aagtatccca aaagcatcac catctatatt taaatcttta
    11761 atgattaatg gcaa
//
LOCUS       DAKPJH010000077        11660 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.077, whole genome shotgun sequence.
ACCESSION   DAKPJH010000077 DAKPJH010000000
VERSION     DAKPJH010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11660
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.077"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..1511
                     /locus_tag="OY092_001849"
     CDS             <1..1511
                     /locus_tag="OY092_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HCX1076790.1"
                     /translation="QDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDR
                     EVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAAD
                     AERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNN
                     WDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQ
                     GIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFD
                     LTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLF
                     SYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHG
                     KFDSQPEYKKPPFPTDGYGYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM
                     EGVTDDVKRRHIRHCYKADPEYGKGVAKALGIDINSIDLETENDETYENFEK"
     gene            1602..1751
                     /gene="rpmG"
                     /locus_tag="OY092_001850"
     CDS             1602..1751
                     /gene="rpmG"
                     /locus_tag="OY092_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCX1076791.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTL
                     HRETK"
     gene            2205..2474
                     /gene="rpsN"
                     /locus_tag="OY092_001851"
     CDS             2205..2474
                     /gene="rpsN"
                     /locus_tag="OY092_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HCX1076792.1"
                     /translation="MAKKSKIAKERKREELVNKYYELRKELKAKGDYEALRKLPRDSS
                     PTRLTRRCKVTGRPRGVLRKFEMSRIAFREHAHKGQIPGVKKSSW"
     gene            2631..3608
                     /gene="guaC"
                     /locus_tag="OY092_001852"
     CDS             2631..3608
                     /gene="guaC"
                     /locus_tag="OY092_001852"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HCX1076793.1"
                     /translation="MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANM
                     QTVMNEKLAKWFAENDYFYIMHRFDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIE
                     KLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPKGVRELENAG
                     ADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPLIADGGIRTHGDIAKS
                     IRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQKGEHKNVEGKKMFVE
                     HKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD"
     gene            3630..4646
                     /locus_tag="OY092_001853"
     CDS             3630..4646
                     /locus_tag="OY092_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001789887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HCX1076794.1"
                     /translation="MKKFIVTVVAFLSIIIIAPITEFKPFIHLQNEVRQYIDIHINKE
                     TISAENKLDTPKKQQFAFNNIQMNMSKSDVEKTLNKPKRVTFNEYGTKWYTYYDDDYN
                     NFIMVSYIKDKVNALYTNQNIITSKSKIKYNTPKSVVIQRLGEPETEIVKGRVRYEQN
                     NKEYDVFHKNHIYTTVFYDKHRRNNVTAVLQVSDAMENRLKEQYGAPSKSLADSFELQ
                     NFDLVNAERKQHQLSTLKYSKQNSETARKHSKDMANNHYFDHTNLKGQSPFDRLKKDG
                     ITFNSAGENLAYGQVSSIYAHQGLMNSIGHRKNILNDTFKILGVGVDFNDEKQPFWTE
                     NYTG"
     gene            complement(5025..5648)
                     /gene="lexA"
                     /locus_tag="OY092_001854"
     CDS             complement(5025..5648)
                     /gene="lexA"
                     /locus_tag="OY092_001854"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HCX1076795.1"
                     /translation="MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVH
                     GHLSRLEEKGYIRRDPTKPRAIEIVSDQTSDNINMEETIHVPVIGKVTAGVPITAVEN
                     IEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
                     EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM"
     gene            5791..6024
                     /locus_tag="OY092_001855"
     CDS             5791..6024
                     /locus_tag="OY092_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076796.1"
                     /translation="MFYNKYKNVSTYIIIFLVSSAAFAIFLLSANISAHSEQVYEMTD
                     HQIKNNTINKAYEHKDPTNNSEQRDGKVFALIN"
     gene            6160..6399
                     /locus_tag="OY092_001856"
     CDS             6160..6399
                     /locus_tag="OY092_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HCX1076797.1"
                     /translation="MSNSDLNIERINELAKKKKEVGLTQEEAKEQTALRKAYLESFRK
                     GFKQQIENTKVIDPEGNDVTPEKIKEIQQKRDNKN"
     gene            6520..8508
                     /gene="tkt"
                     /locus_tag="OY092_001857"
     CDS             6520..8508
                     /gene="tkt"
                     /locus_tag="OY092_001857"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001661967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCX1076798.1"
                     /translation="MFNEKDQLAVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWT
                     RHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHP
                     EYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLM
                     EGISHEAASFAGHNKLSKLVVLYDSNDISLDGELNKAFSENTKARFEAYGWNYLLVKD
                     GNDLEEIDKAITTAKSQEGPTIIEVKTTIGFGSPNKAGTNGVHGAPLGEVERKLTFEN
                     YGLDPEKRFNVSEEVYEIFQNTMLKRANEDESQWNSLLEKYAETYPELAEEFKLAISG
                     KLPKNYKDELPRFELGHNGASRADSGTVIQAISKTVPSFFGGSADLAGSNKSNVNDAT
                     DYSSETPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSSIM
                     GLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALES
                     ESTPTSLVLTRQNLPVLDVPEDVVEEGVRKGAYTVYGSEETPEFLLLASGSEVSLAVE
                     AAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVG
                     TAGKVIAIDGFGASAPGDLVVEKYGYTKENILNQVMSL"
     gene            8786..9028
                     /locus_tag="OY092_001858"
     CDS             8786..9028
                     /locus_tag="OY092_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HCX1076799.1"
                     /translation="MATWLAIIFIVAALILGLIGGFLLARKYMMDYLKKNPPINEEML
                     RMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSAKK"
     gene            9015..9113
                     /locus_tag="OY092_001859"
     CDS             9015..9113
                     /locus_tag="OY092_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076800.1"
                     /translation="MRKSKFAIDRGYFPDMEMASFYNQINKNKYVY"
     gene            9207..9674
                     /locus_tag="OY092_001860"
     CDS             9207..9674
                     /locus_tag="OY092_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcdC family protein"
                     /protein_id="HCX1076801.1"
                     /translation="MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMAT
                     GALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILIS
                     LLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN"
     gene            9798..10919
                     /locus_tag="OY092_001861"
     CDS             9798..10919
                     /locus_tag="OY092_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HCX1076802.1"
                     /translation="MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIV
                     IAGDLYDTTYPSKDAIMLLEQAIGKLNLELRIPIIIISGNHDGKERLNYGASWFEHNQ
                     LFIRTDFTSINSPIEINGVNFYTLPYATVSEMKHYFEDDTIETHQQGITRCIETIAPE
                     IDEDAVNILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHLHHPFSIE
                     DDKIKYSGSLLQYSFSEAGQAKGYRRVTINDGIINDVFIPLKPLRQLEIISGEYNDVI
                     NEKVHVKNKDNYLHFKLKNMSHITDPMMSLKQIYPNTLALTNETFNYNEENNAIEISE
                     KDDMSIIEMFYKHITDKELSDIQSKKIKNILENELRKED"
     gene            10923..>11660
                     /locus_tag="OY092_001862"
     CDS             10923..>11660
                     /locus_tag="OY092_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCX1076803.1"
                     /translation="MKPLHLKLNNFGPFLKEEIDFSKIDNNELFLISGKTGSGKTMIF
                     DAMTYALFGKASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIKEGN
                     TTKTNAKFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFL
                     ISNSREKQGILRTLFDSEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDD
                     NIKGLLEVATQQIDKLIENIPLLQARSK"
BASE COUNT         4313 a         1575 c         2136 g         3636 t
ORIGIN      
        1 aacaagacaa aaagttaact ggtgtttttg ggcatccagt atcagatcga gaaaatagta
       61 tgacagcagg gcctagggga cctcttttaa tgcaagatat ttacttttta gagcaaatgt
      121 cccaatttga tagagaagta ataccagaac gtcgaatgca tgccaaaggt tctggtgcat
      181 ttgggacatt tactgtaact aaagatataa caaaatatac gaatgctaaa atattctctg
      241 aaataggtaa gcaaaccgaa atgtttgccc gtttctctac tgtagcagga gaacgtggtg
      301 ctgctgatgc ggagcgtgac attcgaggat ttgcgttaaa gttctacaca gaagaaggaa
      361 actgggattt agtagggaat aacacaccag tattcttctt tagagatcca aagctatttg
      421 ttagtttaaa tcgcgcggtg aaacgagatc ctagaacaaa tatgagagat gcacaaaata
      481 actgggattt ctggacgggg cttccagaag cattgcacca agtaacgatc ttaatgtcag
      541 atagagggat tcctaaagat ttacgtcaca tgcatgggtt cggttcacac acatactcta
      601 tgtataatga ttctggtgaa cgtgtttggg ttaaatttca ttttagaacg caacaaggta
      661 ttgaaaactt aactgatgaa gaagctgctg aaattatagc aacagatcgt gattcatctc
      721 aacgcgattt attcgaagcc attgaaaaag gtgattatcc aaaatggaca atgtatattc
      781 aagtaatgac tgaggaacaa gctaaaaacc ataaagataa tccatttgat ttaacaaaag
      841 tatggtatca cgatgagtat cctctaattg aagttggaga gtttgaatta aatagaaatc
      901 cagataatta ctttatggat gttgaacaag ctgcgtttgc accaactaat attattccag
      961 gattagattt ttctccagac aaaatgttgc aagggcgttt attctcatat ggcgatgcgc
     1021 aaagatatcg attaggagtt aatcattggc agattcctgt aaaccaacct aaaggtgttg
     1081 gtattgaaaa tatttgtcct tttagtagag atggtcaaat gcgtgtagtt gacaataacc
     1141 aaggtggagg aacacattat tatccaaata accatggtaa atttgattct caacctgaat
     1201 ataaaaagcc accattccca actgatggat acggctatga atataatcaa cgtcaagatg
     1261 atgataatta ttttgaacaa ccaggtaaat tgtttagatt acaatcagag gacgctaaag
     1321 aaagaatttt tacaaataca gcaaatgcaa tggaaggcgt aacggatgat gttaaacgac
     1381 gtcatattcg tcattgttac aaagctgacc cagaatatgg taaaggtgtt gcaaaagcat
     1441 taggtattga tataaattct attgatcttg aaactgaaaa tgatgaaaca tacgaaaact
     1501 ttgaaaaata aatttgatat gtagtttcta tattgcgtag ttgagcagtt tatgatatca
     1561 taataaatcg taaagattcc taacaagaga gggtgtttaa cgtgcgcgta aacgtaacat
     1621 tagcatgcac agaatgtggc gatcgtaact atatcactac taaaaataaa cgtaataatc
     1681 ctgagcgtat tgaaatgaaa aaatattgcc caagattaaa caaatatacg ttacatcgtg
     1741 aaactaagta attcttatca ttcaaatacg acgatttgaa aataaagcgg gcttacctat
     1801 tatattgggg agctcgcttt tttatgaaat ttttgtaaag agtgattaat gaattgagtt
     1861 tcatcggtag aacaatatat gattgtatta gttgttactt tattaaaatt tgagaatttt
     1921 tatagaagga aatagattgc tgattttata aagtcacttt gttagcgaat gcttgaaaga
     1981 atatttaata tattagaatt taaaatttca aagcggaatt taataagtac gaagtaattg
     2041 tggatatgtt ttataaatgt tcgataatac actttaatct taaatatgat ggtttagaaa
     2101 atgatttaac aaagaaatga aactttactg ttgaattatg tgaggattgt gttattatat
     2161 aaatcgtaat aattacgatt tgataaaaag tgaggtaact atatatggct aagaaatcta
     2221 aaatagcaaa agagagaaaa agagaagagt tagtaaataa atattacgaa ttacgtaaag
     2281 agttaaaagc aaaaggtgat tacgaagcgt taagaaaatt accaagagat tcatcaccta
     2341 cacgtttaac tagaagatgt aaagtaactg gaagacctag aggtgtatta cgtaaatttg
     2401 aaatgtctcg tattgcgttt agagaacatg cgcacaaagg gcaaattcca ggtgttaaaa
     2461 aatcaagttg gtaaaatcaa atttcgtact ttagcccatt tacaatatca ataaaacaat
     2521 gtacagtata tacgaatgct ataaactgaa tgttttctca tattaataag gaaacattcg
     2581 gtttttaatt tgcatttaaa aataattagt ttttaaaggg gctatttaaa gtgaaaatat
     2641 ttgattacga agatattcaa ttaataccta ataaatgcat agttgaaagt aggtctgaat
     2701 gtgatacaac aatccaattt ggtccgaaaa aattcaagct acctgtagtt cctgcaaata
     2761 tgcaaacagt tatgaatgag aaattagcga aatggtttgc tgaaaatgat tacttttata
     2821 tcatgcatcg ttttgatgaa gaagcaagaa taccttttat aaaacatatg caaaattcag
     2881 gcttatttgc atctatttca gttggtgtaa agaaagcgga atttgatttt attgaaaagt
     2941 tagctcaaga aaaattaatc cccgaatata ttacaataga tattgcgcat ggtcactcag
     3001 attcagtgat aaacatgatt aaacatataa aaaaccatat acctgatagt tttgttattg
     3061 ctggtaatgt tggtacgcca aaaggtgtta gagaattaga aaatgctggt gctgatgcta
     3121 ccaaagtcgg tataggtcct ggtagagttt gtattacaaa gattaaaaca ggttttggta
     3181 ctggtggttg gcagttagcg gcattaaaca tatgtagtaa agcagctcgt aaacctttga
     3241 ttgccgatgg tggtataaga acgcatggcg acattgctaa atcaattaga tttggtgcat
     3301 caatggtcat gattggttca ttatttgcgg cacacgaaga atcacctggt gaaactgtag
     3361 aacttgatgg taaacagtat aaagaatatt ttggtagtgc atctgaattt caaaaaggcg
     3421 aacataaaaa tgtagaaggt aaaaaaatgt ttgtagaaca taagggttca ttaatggata
     3481 ccttaaaaga aatgcaacaa gatttacaaa gctcaatttc atatgccggt ggaaaagact
     3541 tgaaatcatt acgtactgta gattatgtta ttgttagaaa ctctattttc aacggtgata
     3601 gagattaata tttatagtag gtgatgtaaa ttaaaaaatt catagtaact gttgttgcgt
     3661 ttttatcaat tattattatt gcgccaataa cagaatttaa accattcatt catttacaaa
     3721 atgaagtaag acaatatatt gacattcaca tcaataaaga aacaatttct gcggaaaata
     3781 aattggatac gcctaagaaa caacaatttg cctttaataa tattcagatg aatatgtcaa
     3841 agtcagatgt tgagaaaaca ttgaataaac caaaaagagt tacatttaat gaatatggca
     3901 cgaagtggta tacgtattat gatgacgatt acaataattt tatcatggta agctatatta
     3961 aagataaagt aaatgcgtta tatacaaatc aaaatatcat tacttcaaaa tcaaaaatta
     4021 aatacaatac accgaaatcg gttgtaatac aaagattagg cgaaccagag acagagattg
     4081 ttaaaggtag agtgcgttac gaacaaaata ataaagaata tgatgttttc cataaaaatc
     4141 acatttatac gacggtattt tatgataagc atcgacgtaa taatgtaaca gctgttttac
     4201 aagtaagtga tgctatggaa aatagattaa aagaacaata tggagcacct tcgaaatcgc
     4261 ttgcagatag ttttgaacta caaaattttg atttagttaa tgctgaaaga aaacaacatc
     4321 aattatctac attgaagtat tctaaacaga attctgaaac tgctcgtaag catagtaaag
     4381 atatggccaa caatcattat tttgatcata caaatttaaa aggtcaatca ccatttgatc
     4441 gattgaaaaa agatggtatt acatttaact cagccggaga gaatttagca tatggtcaag
     4501 ttagtagtat ctatgcacat caaggattaa tgaattctat tggtcacaga aaaaatattt
     4561 taaatgatac gtttaaaata ttaggtgttg gtgttgattt taatgatgaa aaacaacctt
     4621 tttggacaga aaattatact ggttaatgtt tttggcatga gattaaaggg taatgtttgt
     4681 ctgtaaggaa gtagataaac atgatgacaa cagataaacc aaaagatgcg gatatagttg
     4741 aacgcgtcaa agatatactt aataaaaaag aaagaaaaaa taataatggc tcgctcctgt
     4801 aaattattac gggggcgagt tttaatttgt gtaacatttt gcagaaatct gtaattcaaa
     4861 atttatatta aagaatgaga ttatctaaca attcgcaatt tctgtttgaa ctgaatttag
     4921 attagaataa ataaaacctc ttgaaaacgt aactttttca agaggtccaa aatttataaa
     4981 aatgagggct taacaattac gataatatat aacggtttaa aatattacat ttcgcggtac
     5041 aaaccaatta ctttcccaat tacagcaaca ttgtctaggt aaattggctc cattgtacta
     5101 ttttcaggtt gtaatcgata acgatttttt tctttataga agcgtttgac agttgcttca
     5161 tcttcctcgg tcatagcaac aataatgtct ccattttctg ctatggtttg actgcgaaca
     5221 attactttgt ctccgtctaa tataccagcc tcaatcatac tgtcgcctac gacgtttaat
     5281 atgaatatgt cgctattgtg tgtcgatgtt aagtgttcag gtaatggaaa atattcttca
     5341 atattttcta ctgcggtaat aggaacacct gctgtgactt taccaataac tggcacatga
     5401 atcgtttctt ccatattaat attatcactt gtttgatcac ttacaatttc tatagcacgt
     5461 ggtttcgtcg gatctcttct tatatagcct ttttcttcaa gacgtgaaag gtgaccatga
     5521 acagttgaac tggatgctaa gccaactgct tcaccaattt cgcgaacact aggcggataa
     5581 cctttcattt gaacaacttg tttaatatag ttatatattt cgctttgtcg ttttgttaat
     5641 tctctcatat ataggcactc cctaaattaa tttatataca gtatatcatt aattcacaac
     5701 caaaacaaac atttgttcgt taaaatattg acagagaaca taagttctga taaattacta
     5761 atacaaacaa atgttctagg agtgaaaatg atgttttaca ataaatataa aaacgtatca
     5821 acatatatca tcatattttt agtttcaagt gcagcctttg caatattctt gttaagtgcg
     5881 aacattagtg ctcactcgga acaagtgtac gaaatgactg accatcaaat taagaacaat
     5941 acgataaata aagcatacga acataaagac cctacaaaca atagcgaaca aagagatggg
     6001 aaagtgttcg ctttaataaa ttgatacatt gtcacaacgt tattttgcct atttttgcga
     6061 aatagcgttt tttattactt ttttgctgat cttaaatttg ttatattttg ttaaagtatt
     6121 ataatgattg aataaacaaa ttgaaggtag gttttttaat tgagtaattc tgatttgaat
     6181 atcgaaagaa ttaacgagtt agctaaaaag aaaaaagaag taggattaac tcaagaagaa
     6241 gcaaaggagc aaacagcctt aagaaaagct tatcttgaga gttttagaaa agggtttaaa
     6301 caacaaattg aaaatactaa agtaattgat ccagaaggta atgatgtaac acctgaaaaa
     6361 attaaagaga tacaacaaaa aagagataat aaaaattaaa tcacaaatct gtaaagaatt
     6421 ttctgacatt ataacttgaa ataagtattt tacttatctt tttattttaa aataagttat
     6481 aatgtatttg ataaaattga agaagggaag atacacaaga tgtttaatga aaaagatcaa
     6541 ttagctgttg atacgctacg tgcactaagt atcgacacaa tcgaaaaagc gaattctggt
     6601 catccaggat tacctatggg agctgcccca atggcttaca ctttgtggac acgtcatctg
     6661 aattttaatc cacaatctaa agattacttc aatagagacc gtttcgtatt atctgcaggg
     6721 catggttcag cattattgta tagcttgtta catgtttctg gtagtttaga attagaagaa
     6781 ttaaagcaat ttagacaatg gggttctaaa acaccaggtc atcctgaata cagacataca
     6841 gatggtgtag aagttactac cggaccactt ggacaaggtt ttgctatgtc agtaggatta
     6901 gctttagcag aagatcacct agcagggaaa tttaataaag aaggatataa tgttgtagat
     6961 cattacacat atgtattagc ttctgacggt gatttaatgg aaggtatatc gcatgaagca
     7021 gcttcatttg ctggacataa taaattaagt aaattagttg ttttatacga ttcaaatgat
     7081 atttcattag atggcgaatt aaacaaagct ttttctgaaa acacaaaagc tcgttttgaa
     7141 gcatatggtt ggaattactt actagttaaa gatggtaatg atttagaaga aattgataaa
     7201 gcgattacta cagctaaatc tcaagaagga ccaacgatta ttgaagttaa aacaacaatc
     7261 ggatttggtt caccgaataa agcaggaact aatggtgttc atggggcacc tttaggtgaa
     7321 gttgaaagaa aattaacatt cgaaaattac ggtttagatc ctgaaaaacg ttttaatgtt
     7381 tcagaagagg tatacgaaat tttccaaaat actatgttaa aacgtgctaa tgaagatgaa
     7441 tctcaatgga attcattatt agaaaaatat gcagaaacat atcctgaatt agcagaagaa
     7501 tttaaattag cgattagtgg taaattgcct aaaaattata aggatgaatt accacgtttt
     7561 gaactgggtc ataatggtgc atctcgtgct gattctggta ctgttattca agcaatcagt
     7621 aaaactgtcc cttcattctt tggtggatca gcagaccttg ctggttcaaa caaatccaat
     7681 gtaaatgatg caactgatta tagttctgaa acacctgaag gtaaaaatgt gtggtttggt
     7741 gtacgtgaat ttgctatggg tgctgctgta aatggtatgg ctgcacatgg aggtttacat
     7801 ccatatggtg caacattctt cgtatttagt gattatttaa aaccagcgtt acgtttatca
     7861 tcaattatgg gattaaatgc aacgttcatc ttcacacatg attcaattgc agtaggtgaa
     7921 gatggtccta ctcatgaacc aattgagcaa ttagctggat taagagccat tccaaatatg
     7981 aatgttatcc gtcctgctga tggtaatgaa acaagagtag catgggaagt tgccttagaa
     8041 tctgaatcta cacctacttc attagtattg acacgtcaaa acttaccggt attagatgta
     8101 ccagaagatg tagttgaaga aggcgttcga aaaggtgcct atacagttta tggctctgaa
     8161 gagacaccag aattcctatt attagcttca ggttcagaag ttagtcttgc agttgaagct
     8221 gctaaagatc ttgaaaaaca aggtaaatca gtacgtgttg tttcaatgcc taactggaat
     8281 gcatttgaac aacaatctga agaatataaa gaatcagtta ttccatcaag cgtaacaaaa
     8341 cgtgttgcga ttgaaatggc ttcaccgctt ggatggcata aatatgtagg tactgcaggt
     8401 aaagttattg ctattgacgg ctttggcgca agtgcacctg gcgatttagt agttgaaaaa
     8461 tatggatata caaaagaaaa tatcttaaac caagttatga gcttataaga ataatttata
     8521 aagcgagtat gtttagaagt ctaggatgca taatcttagg cttcttttaa agtgttgaaa
     8581 tttagagtat agcacttaaa ctacatcata agtgataagt tatgaaagta tactatttca
     8641 gattaatctt taaaagctct gttataacag catgattttt gatattattt ttagtatcga
     8701 tattaaaata cttgaataaa ctagttcttg aaataatgtg atgaatttag taaaattcag
     8761 taggataaag aaagcgggtg aaacaatggc aacttggtta gcaattattt ttatagtagc
     8821 tgcattaatt ttaggtttaa ttggaggttt ccttttagct agaaaatata tgatggacta
     8881 cttgaagaaa aacccaccaa tcaacgaaga aatgcttcgt atgatgatga tgcaaatggg
     8941 tcaaaaacct tctcagaaga aaattaatca aatgatgacg atgatgaata aaaatatgga
     9001 tcaaaatatg aagagtgcga aaaagtaaat tcgcaattga tagaggctat tttccagata
     9061 tggaaatggc ctctttttat aatcaaatta ataagaataa atatgtttat taaaattaaa
     9121 gttaacaaaa tgacgaatag actgagaaat gctataattc attttgtatg atttacagag
     9181 agtttattta acgagaaggt gtctgcgtgc tctatttaat attttcaatc attgtagctt
     9241 tatttatggg aactatagtt atagttattc gtatgaaagc tcaaaattat ccggtaaatg
     9301 agaaaaaaat agttttgcca ccgtttttta tggcgaccgg tgcattgatg tacgtcgttc
     9361 catattttag gctaacagga tcggaaatgc tagaagcctt tataattggt ttgctttttt
     9421 ctacagttct aatttggact tctcgatttg aagtcaaagg tacagaaatt tatatgaaac
     9481 gatctaaagc atttccagtt attttgattt cattacttat cattcgtact gtgatgaaaa
     9541 tattcattag taatgaaata gatcctggag aattaggcgg catgttcttt ttattagcat
     9601 tctgtatgat tgttccttgg agagcagcaa tgctatataa atacaaaaaa ctaaagaaaa
     9661 cattaatcaa ttaattactt ttaaaaccac ttgtgatcga cttctaaatc agtcaatgag
     9721 tggttttaat tttacttgaa aaggtgaaat gattatatta aaataaaagc gaacaaatgt
     9781 tctatatgga ggcagtaatg aaaattatac atacagcaga ctggcactta gggaaaatat
     9841 taaatggcaa acagctttta gaagatcaag cgtatatttt agatatgttc gtagaaaaaa
     9901 tgaaagaaga agaacctgat atcattgtga tagctggaga tttatatgac acaacatatc
     9961 caagtaaaga tgcaatcatg ttattagaac aagcgattgg aaagttaaat ttagaactgc
    10021 gtataccaat aattattatt agtggaaatc acgatggtaa agagaggtta aactatgggg
    10081 cgagttggtt tgaacataat cagttattta taagaacaga ttttacatcg attaattcac
    10141 caatagagat aaatggggtt aatttttata cactccctta tgctactgtg agcgaaatga
    10201 aacactactt tgaagatgac accattgaaa cacatcaaca gggaattacg cgctgtattg
    10261 aaacaatagc accggaaatt gatgaagatg ccgtcaatat tttaattagt catctgactg
    10321 ttcaaggtgg aaagacatct gattctgaaa gaccattaac tattggaacg gttgaatcag
    10381 ttcagaaagg tgtttttgat atatttgatt atgtcatgct aggtcacttg catcatccat
    10441 ttagtataga agacgacaaa attaaatata gtggctcctt attgcagtat tcattttcgg
    10501 aagcgggtca agctaaaggg tatagacgtg taacaattaa tgatggcatt attaacgatg
    10561 tatttattcc tcttaagcca cttagacaat tggaaattat ctcaggcgaa tataatgatg
    10621 ttattaatga aaaagttcat gtgaaaaata aagataatta tttacatttt aaacttaaaa
    10681 atatgtctca tattactgat ccaatgatga gtttaaaaca aatttatcct aatactttag
    10741 cgctgacgaa tgaaactttt aattacaatg aagaaaataa tgctatagaa ataagtgaaa
    10801 aagatgacat gtcaattatc gaaatgtttt ataaacatat aactgataaa gaattatcgg
    10861 atatccaatc taaaaagata aaaaatattt tagaaaacga attgagaaag gaggattaat
    10921 gaatgaaacc attacattta aagttgaata atttcggccc ctttttaaaa gaagaaattg
    10981 atttttctaa aattgataat aatgaattgt ttttaataag tggtaagact ggatcgggta
    11041 aaacaatgat ttttgatgca atgacttatg ccttgtttgg taaagcatca actgaacaaa
    11101 gagaagaaaa tgatttgaga agtcatttcg ctgatggtaa acagccgatg tcagtaacat
    11161 ttgaatttca attaaatcat cgaatttata aagtgcatag acaaggccct tatatcaaag
    11221 aaggtaatac aacaaaaacg aacgctaaat ttgatgtatt tgagatggtg gatggcaagt
    11281 atgaaattag agaaagtaaa gtaatttcag gtacccaatt cattattgaa ttattaggag
    11341 taaatgcaga tcaattccga caattgttta ttttgcctca aggtgaattc aaacgctttt
    11401 taatatcaaa cagtcgtgaa aagcaaggga tattaagaac actgtttgac agtgaaaaat
    11461 ttgaagctat acgagaaata ttaaaagaag aagtaaaaaa agaaaaagct caaatcgaga
    11521 atagatatca acaaattgac cttttatggc aagaaattga atcatttgat gatgacaata
    11581 taaaaggctt attagaggtt gccactcaac agatagacaa attgattgaa aatataccac
    11641 ttttacaagc taggtcgaaa
//
LOCUS       DAKPJH010000078        11654 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.078, whole genome shotgun sequence.
ACCESSION   DAKPJH010000078 DAKPJH010000000
VERSION     DAKPJH010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11654
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.078"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            58..984
                     /locus_tag="OY092_001863"
     CDS             58..984
                     /locus_tag="OY092_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076804.1"
                     /translation="MGKYIFKRFIYMLISLFIIITITFFLMKLMPGSPFNDAKLNAEQ
                     KEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLT
                     AMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWF
                     PVAGWEGFSTAVLPSLALSAAVLATVSRYIRAEMIEVLSSDYILLARAKGNSTMRVLF
                     GHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAIT
                     LLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK"
     gene            984..2054
                     /locus_tag="OY092_001864"
     CDS             984..2054
                     /locus_tag="OY092_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076805.1"
                     /translation="MAENKNNLSINEDHSNAAMTHTSDAIASSDFIIRELDFNQEPEM
                     QRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAFIGPVINKHDYAEQNVQHRNLPA
                     KIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFI
                     GVVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIW
                     TIILAMSITGWLGMSRVVRGEFLKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIV
                     VTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLIYPHELFIPAMILSL
                     LILFFYLFSDGLRDAFDPKMRK"
     gene            2070..3152
                     /locus_tag="OY092_001865"
     CDS             2070..3152
                     /locus_tag="OY092_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076806.1"
                     /translation="MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGES
                     GSGKSVTTKAITKLFQGDTGRIKKGEILFLEEDLAKKPENELIKLRGKDISMIFQDPM
                     TSLNPTMQIGKQVMEPLIKHKNYSKAQAKKRALEILNLVGLPNAEKRFKAYPHQFSGG
                     QRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLG
                     VVANIADRVAVMYGGQMVETGDVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPG
                     APPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPEL
                     VKQCMKPMPNNYEKPLKVERVSFNEK"
     gene            3142..4083
                     /locus_tag="OY092_001866"
     CDS             3142..4083
                     /locus_tag="OY092_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076807.1"
                     /translation="MKNDEVLLSIKNLKQYFNAGKKNEVRAIENISFELYKGETLGLV
                     GESGCGKSTTGKSIIKLNDITSGEILYEGIDIQKIRKRKDLLKFNKKIQMIFQDPYES
                     LNPRLKVMDIVAEGIDIHHLATDKRDRKKRVYDLLETVGLSKEHANRYPHEFSGGQRQ
                     RIGIARALAVEPEFIIADEPISALDVSIQAQVVNLLLKLQREKGITFLFIAHDLSMVK
                     YISDRIAVMHFGKIVEIGPADDIYQYPLHDYTKSLLSAIPQPDPESERSRKRFSYIDD
                     EANNHLRQLHEIRPQHFVFSTEEEAAQLRENKLVTQN"
     gene            4101..5756
                     /locus_tag="OY092_001867"
     CDS             4101..5756
                     /locus_tag="OY092_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1076808.1"
                     /translation="MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLT
                     SLDTSLITDEISSEVTAQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTIKVKLRSDA
                     KWSNGDKVTAQDFVYAWRKTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALN
                     DETLQIELEKPVPYINQLLALNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWK
                     QEDKTLLSKNQYYWDKKNVKLDKVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYK
                     DNKGLNFVLTTGTFFVKMNEKQYPDFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDT
                     LTAKGIAKAPNGKDYASTMNSPLKYNPKEARAHWEKAKKELGKNEVTFSMNTEDTPDA
                     KISAEYIKSQVEKNLPGVTLKIKQLPFKQRVSLELSNNFEASLSGWSADYPDPMAYLE
                     TMTTGSAQNNTDWGNKEYDQLLKVARTKLALQPNERYENLKKAEEMFLGDAPVAPIYQ
                     KGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDKSIDKETGKKKK"
     gene            5967..7682
                     /locus_tag="OY092_001868"
     CDS             5967..7682
                     /locus_tag="OY092_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HCX1076809.1"
                     /translation="MGKLIKYISILIVIVLVLSACGKSSNKDEGVKDATKTETSKHKG
                     GTLNVALTAPPSGVYSSLLNSTHADAVVEGYFNESLLATDKKIRPKAYIASWKDIEPA
                     KKIEFKIKKGIKWHDGNELKIDDWIYSIEVLANKDYEGAYYPSVENIQGAKDYHEGKT
                     DHISGLKKIDDYTMQVTFDKKQENYLTGFITGPLLSKKYLSDVPIKDLAKSDKIRKYP
                     IGIGPYKVKKIVPGEAVQLVKFDDYWQGKPALDKINLKVIDQAQIIKAMEKGDIDVAN
                     DATGAMAKDAKSSNAGLKVLSAPSLDYGLIGFVSHDYDKKSNKTGKVRPKYEDKELRK
                     AMLYAIDREKWIKAFFNGYASEINSFVPSMHWIAADPKELNDYKYDPEKAKKILDKLG
                     YKDRDGDGFREDPKGNKFEINFKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKLVEFG
                     KYNEDLANASKDMEVYFRSWAGGTDPDPSDLYHTDRPQNEMRTVLPKSDQYLDDALDF
                     EKVGIDEKKRKDIYVKWQKYMNDELPGLPMFQGKSITIVNDKVRNLDIEIGTDQSLYN
                     LTKEA"
     gene            7733..8719
                     /locus_tag="OY092_001869"
     CDS             7733..8719
                     /locus_tag="OY092_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076810.1"
                     /translation="MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGES
                     GCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPM
                     TALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGG
                     MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLS
                     VVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGI
                     VPSIQAFHVNKCRFANRCNKKMDICNNQSPKMHVCEDVIVRCHLYKNEYKEI"
     gene            8722..9702
                     /locus_tag="OY092_001870"
     CDS             8722..9702
                     /locus_tag="OY092_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000427769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HCX1076811.1"
                     /translation="MENILEVNQIKKYYKIKTGLLQKTQYVKAVDDVSFSIKKGQTFG
                     LVGESGCGKSTLGKVIIRLEDATSGSIIVNGEDITRLQGKKLRKSRQQYQMIFQDPYA
                     SLNPMQMVGDIISEPILNYKKLPKEEIKKEVLYLLKCVGLSEDAYYKYAHEFSGGQRQ
                     RVGIARALALRPSLIVADEPVSALDVSVQSQVLNLLKDLQEQFNLSYLFIAHDLSVVK
                     HISDVIGVMYLGHIVEIASDKEIYENPKHPYTKALISSIPQIDKHNNNRIILKGELPS
                     PSNPPQGCPFHTRCPIAKDKCKENIPQLKDIGDEHQVACFYVNKVGDLNG"
     gene            9695..10657
                     /locus_tag="OY092_001871"
     CDS             9695..10657
                     /locus_tag="OY092_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076812.1"
                     /translation="MVKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIK
                     QEAINAQREKLGLNDSISHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLG
                     AMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
                     WFPFQGSVDINLKEGTFEYYMSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDY
                     VLTARSKGLSMNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSYNGIGKLF
                     LESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN"
     gene            10669..11550
                     /locus_tag="OY092_001872"
     CDS             10669..11550
                     /locus_tag="OY092_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076813.1"
                     /translation="MQNKSKSPFKIALSKFIHNKIAMLSIIFLLIITIVSIIAPLIAP
                     FPVNQQDLLNIKGEMTAQNILGTDSGGRDNFSRLLYAGRISLSIGITSTIGMLLIGIT
                     VGVISGYFGSIVDTLLMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSAIILVLVII
                     VLSWGGIARLVRGKVLQEKENEYFLAAKSIGTPTYKIILKHLLPNILSVVIVQATLLF
                     AGMIVVESGLSFLGFGISKAIPSWGNMLSDAQEGDVISGKPWIWMPPAIMITLTILSI
                     NFVGEGLKDAFNPRGRR"
BASE COUNT         4278 a         1559 c         2165 g         3652 t
ORIGIN      
        1 aaaattttga agggaatgga aatttagaaa tcggaatttg ttagaggagg ggattagatg
       61 gggaaatata ttttcaaacg atttatttat atgcttattt ctttatttat tattattaca
      121 attacatttt tcttaatgaa attaatgcca ggttcgccat ttaacgatgc taaattaaat
      181 gctgaacaaa aagaaatttt aaatgaaaaa tatggattaa atgatcctgt agctacgcag
      241 tatttacatt atttaaaaaa tgttgttaca ggcgattttg gtaattcatt ccagtatcat
      301 aatcaacctg tgtgggattt gattaaaccg agactactac cttcttttga aatgggtctt
      361 acagcaatgt tcatcggtgt gatactggga cttattttag gtgttgcagc agctactaaa
      421 caaaattctt gggttgacta tacaactaca gttatttcag ttattgcagt atctgtacca
      481 tcttttgtac ttgctgtact tttacaatat gtatttgcag ttaaattaag atggttccca
      541 gtagctggat gggaaggttt ttcgaccgcg gtattaccgt cacttgcatt atctgcagct
      601 gttttagcaa ctgtctccag atacataaga gcagagatga ttgaggtatt aagttcagac
      661 tacattttat tagcgagagc taaaggtaat tcgacaatgc gtgtactttt tggacatgca
      721 cttagaaatg ctttaattcc aattattaca attatcgttc ccatgttagc aagtatttta
      781 acaggcactt taactattga aaatattttt ggggttcctg gattagggga tcaattcgta
      841 cgttcaatta caacaaatga tttttcagta atcatggcaa tcacactatt atttagcaca
      901 ctgtttatcg tttctatttt tattgtagat attttgtacg gtgtgataga tccacgaatt
      961 cgtgttcaag gaggtaaaaa ataatggctg aaaataaaaa caatttgtcg attaacgaag
     1021 atcattctaa tgcagctatg acgcatacct ctgacgctat cgcatcatct gattttatta
     1081 ttagagaatt agattttaat caggaacctg aaatgcaacg agaaagcaaa aacttttggc
     1141 aagatgcttg ggctcaatta aaacgaaata agttagctgt tgtcggtatg ataggtttaa
     1201 ttatcattgt aatatttgct tttatcggtc cagttataaa taaacatgat tatgctgaac
     1261 aaaatgtaca acatagaaat cttccggcaa aaatacctgt attagacaaa gttccatttt
     1321 taccttttga tggtaaagat gcagatggca aggatgctta taaagcagca aatgctaaag
     1381 aaaattattg gtttggtact gatcagttgg gtcgagattt atggacaaga acatggaaag
     1441 gtgctcaaat ttcattgttt atcggtgttg ttgcagcgat gttagatatt tttattggcg
     1501 ttgtatatgg tgcgatttct ggattcttcg gtggacgtgt cgatacgatt atgcaacgta
     1561 tacttgaagt catagcatct attccgaatt taattgtcgt aattttattt gtattaattt
     1621 ttgaaccatc catttggaca attatattgg ctatgtctat cacaggctgg ttaggcatga
     1681 gcagagttgt acgtggagaa tttttaaaat taaaaaatca agagtttgtc atggcttcga
     1741 aaacattggg ggcttcaaaa ttcaaattga tatttaagca tattttacct aatacattag
     1801 gtgctatcgt ggttacatca atgtttacag tacctagtgc tattttcttc gaagcatttt
     1861 taagtttcat tggtataggt gtacccgcac ctcaaacatc gttagggtca ttagtaaatg
     1921 atgggcgcgc aatgttatta atttatccac atgaattatt tataccagca atgattttaa
     1981 gtttattaat tctattcttt tacttattta gtgatggatt acgtgatgca tttgatccga
     2041 aaatgcgtaa ataaaagggg gcatagcata tgactgaaag aatattagaa gtaaatgatt
     2101 tgcatgtttc ctttgatatt acagcagggg aagtgcaggc agtgagaggt gtagattttt
     2161 atttaaacaa aggggaaaca ttggcaattg ttggtgaatc aggttcaggt aaatctgtaa
     2221 caacaaaagc aattacaaaa ttattccaag gggacacagg aagaattaaa aagggagaaa
     2281 ttttattttt agaggaagat ttagcaaaaa aacctgaaaa tgagttaatt aaattacgtg
     2341 gcaaagatat ttcaatgatc tttcaagatc caatgacatc tttaaaccca acgatgcaaa
     2401 ttggtaaaca agtcatggaa ccattaatta agcacaaaaa ttatagtaaa gcacaagcta
     2461 aaaagcgcgc attggaaata ctaaatcttg taggtttacc aaatgcagaa aaaagattta
     2521 aagcatatcc acatcaattt tcaggtggac aaaggcaaag aattgttatt gcaaccgcat
     2581 tagcttgtga acctaaagtg ctcattgctg atgaaccaac gactgcatta gacgtaacga
     2641 tgcaggcaca aattttagat ttaatgaaag aactacaaca aaaaatcgat acagcaatta
     2701 tttttataac gcatgattta ggggttgttg cgaatattgc tgatagagtg gcagttatgt
     2761 atggtggtca aatggttgaa acaggagatg ttaacgaaat attttatgat ccaaagcatc
     2821 catatacatg gggattatta tcgtcaatgc ctgatttatc aacaacaaat gacacaccat
     2881 tactagcgat tcctggagcg ccacctgatt tattacaccc acctaaaggt gatgcatttg
     2941 cgagacgtag tcaatatgca ttagatattg attttaaagt agaaccaccg tggtttaaag
     3001 tttcaccgac acattttgtg aaatcttggt tattagacgc acgtgcacca aaagttgaac
     3061 tacccgagct ggtaaaacaa tgtatgaaac cgatgcctaa taattatgaa aaaccactca
     3121 aggtagaaag ggtgtcgttc aatgaaaaat gatgaagtgc tattatctat taaaaattta
     3181 aagcaatatt ttaacgcagg aaagaaaaac gaagtgagag cgattgaaaa tatttcgttt
     3241 gaattataca aaggggaaac attaggttta gtaggagaat cggggtgtgg taaatctaca
     3301 actggtaaat caattatcaa acttaatgat attacaagtg gagaaatttt gtatgagggt
     3361 attgatatac aaaagattcg taaacgcaaa gatttgctta aatttaataa aaagatacag
     3421 atgatttttc aagacccata tgagtcttta aatcctaggt taaaagtaat ggatatagta
     3481 gctgaaggta ttgatatcca tcatttagca actgataaac gtgaccgtaa aaaacgtgtc
     3541 tatgatttac ttgaaactgt tggattaagt aaagaacatg ccaatcgtta tcctcatgaa
     3601 ttttcaggcg gacaacgcca acgtattgga attgcccgtg cattagccgt tgaaccagaa
     3661 tttattattg cagatgaacc tatttcagca ttggatgttt cgattcaagc tcaagtagtc
     3721 aatttgttat taaaattaca gcgtgaaaaa ggtattacat tcctatttat tgcacatgat
     3781 ttatcaatgg tgaagtatat ctctgatcga attgcagtca tgcattttgg gaaaattgta
     3841 gaaatcggac cagcagacga tatttatcaa tatccattac atgattatac taagtcttta
     3901 ttgtcggcaa ttcctcaacc ggatcctgaa tcggaacgta gtcgcaaacg atttagttat
     3961 attgatgatg aagcaaataa tcatttaaga caattacatg aaataagacc acagcatttt
     4021 gtctttagta ctgaagaaga agcggcacaa ctacgagaaa ataaattggt gacacaaaat
     4081 taagggaagg gggaaatgca atgacgagaa aatttagaac acttatttta attttgattg
     4141 ctacaattgc attaagtggt tgtgctaatg atgatggtat ttattcagat aaaggtcaag
     4201 tattcagaaa aattttgtca tcagacttaa catcccttga tacatcatta ataacggatg
     4261 aaatatcttc tgaagtgact gcgcaaacat tcgaaggttt atacacatta ggaaaaggtg
     4321 acaaaccggt gttaggtgtt gcgaaagctt ttcctgaaaa gagtaaagat ggtaaaacta
     4381 taaaggttaa attaagaagc gatgctaaat ggagcaatgg tgacaaagtg actgcacaag
     4441 actttgttta tgcttggaga aaaacagttg accctaaaac aggttctgaa tttgcataca
     4501 ttatggggga cattaaaaat gcgagtgata ttagtactgg taagaaacct gtagagcaat
     4561 taggtatcaa agcattaaat gatgaaacat tacaaattga attagaaaag ccggttccat
     4621 atattaatca attattagca cttaatacat ttgcacctca aaatgaaaaa gttgccaaaa
     4681 aatatggtaa aaattacggt acggcagctg atagagcggt atacaatggt ccatttaaag
     4741 ttgatgattg gaaacaagaa gataaaacct tactatctaa aaatcagtat tattgggata
     4801 aaaagaatgt aaaattagat aaagtgaatt ataaagttat taaagactta caagccggtg
     4861 catcattgta tgatactgaa tcagtagatg acgcagttat tactgcagat caagtaaata
     4921 aatataaaga taacaaagga ttaaactttg tgttaacgac tgggacattt tttgtaaaaa
     4981 tgaatgaaaa acaatatcct gattttaaaa acaaaaattt aagactggct atcgcacaag
     5041 caatagataa aaaaggatac gttgattcag tgaaaaacaa tggctcaatt ccttccgata
     5101 cactaacagc caaaggaatt gcgaaagcac cgaatggcaa agattatgcg agtaccatga
     5161 attcaccgtt aaaatataat cctaaagaag caagagcaca ttgggaaaaa gctaaaaaag
     5221 agttaggtaa aaatgaagtg acattttcta tgaacacaga agatacgcca gatgcaaaaa
     5281 tatctgcaga atatatcaaa tcgcaagttg agaaaaattt accaggtgtt actttaaaaa
     5341 ttaagcaatt gccatttaag caaagagttt cattagagtt aagtaacaat tttgaagcat
     5401 cacttagtgg ttggtctgca gattaccctg atcctatggc ttatttagaa acaatgacca
     5461 caggtagcgc acaaaataat acagactggg gtaataaaga atatgatcaa ttacttaaag
     5521 tagcaagaac caaattggca cttcaaccga acgaacgata tgaaaacttg aaaaaagcag
     5581 aagaaatgtt cctaggagat gcaccggtag caccaattta tcaaaaaggt gttgcacatt
     5641 taacaaatcc tcaagtaaaa ggattaattt accataaatt tggtccaaat aactcactta
     5701 aacatgtcta tattgataaa tcgatagata aagaaacagg taagaagaaa aaataatatg
     5761 ctttgtaaat taggctggag acatatctcc agtctttttg tgttggatag aaactttggg
     5821 aataaaaatt taaaataagt cgttttttaa attactgaaa ttgattaaat gcataaataa
     5881 ctgaatattc taaaaataaa cttgtaataa ttttttctat gagtaaacta aaaagaaaaa
     5941 ttagattgaa agtaggaggc atataaatgg ggaagctaat taaatatatt tcaatactta
     6001 ttgttatcgt tttagtgttg agtgcttgcg gaaaaagcag taataaagac gaaggagtaa
     6061 aagatgctac taaaacagaa acctcaaaac ataaaggtgg taccttaaat gtagcattaa
     6121 cagcacctcc aagtggtgtt tattcttcgt tattaaatag tacacatgcg gatgctgtag
     6181 ttgagggata ttttaacgaa agcttattag caactgataa aaaaatacgt cctaaggcat
     6241 atattgcttc atggaaggac atcgagccgg ctaagaaaat agaatttaaa attaaaaaag
     6301 gtattaaatg gcatgatggt aatgaattga aaattgatga ttggatttat tcaattgaag
     6361 tcttagctaa caaggactac gaaggtgctt attatccaag tgtagaaaat atccaaggtg
     6421 cgaaagatta tcatgaagga aaaactgatc atattagcgg attgaagaaa atagatgact
     6481 acactatgca ggttacattt gataaaaaac aagaaaatta cttaacagga tttattactg
     6541 gacctttatt aagtaaaaaa tatttatcag atgtaccaat taaagattta gcgaaatcag
     6601 ataaaatccg aaaatatcct attggtattg gaccgtataa agttaagaaa atcgttccag
     6661 gtgaggctgt tcaactcgtt aaatttgatg attattggca aggtaagcct gcactagaca
     6721 aaatcaattt aaaagttatt gatcaagctc aaattattaa ggcaatggaa aaaggcgata
     6781 ttgatgttgc gaatgatgct accggtgcaa tggcaaaaga tgctaagtca tctaatgctg
     6841 gtctcaaggt attatctgcg ccaagcttag actacggttt aataggattc gtatctcatg
     6901 attacgataa aaaatctaat aaaactggta aagtgagacc aaaatatgaa gacaaagaat
     6961 tacgtaaagc aatgctttat gcaattgata gagaaaaatg gatcaaagca tttttcaatg
     7021 gttacgctag tgaaataaat agttttgtac catcaatgca ttggatagct gctgatccta
     7081 aggaactaaa cgattataaa tatgatcctg aaaaagctaa aaaaatctta gataagttag
     7141 gttataaaga tagagatggt gatggattta gagaagatcc taaaggtaat aaatttgaga
     7201 ttaactttaa acattattca ggttcaaatc ctacttttga accaagaact gctgcgataa
     7261 aagatttctg ggaaaaagtt ggcttgaaaa caaatgtgaa gttagtagaa ttcggtaaat
     7321 ataatgaaga cttagcaaat gcatctaaag atatggaagt gtactttaga tcatgggcag
     7381 gaggtacaga tccagatcca tcagatttat accacactga tagacctcaa aatgaaatga
     7441 gaacagtttt accaaaatca gatcaatatt tagatgatgc attagacttc gaaaaagtag
     7501 gcattgatga aaagaaacgt aaagatattt atgttaaatg gcaaaaatat atgaatgatg
     7561 agttacctgg attaccaatg ttccaaggta aatcgataac tattgttaac gataaagtac
     7621 gaaacttaga cattgaaatt ggaactgatc aaagtttata taatttaact aaagaagctt
     7681 agtaatgtaa cctcgacgat tttgtcgagg tttacttata tggggggatg ttatgaataa
     7741 tgtattgtta gaggttaaag atttagaaac atcattaaaa ataaataatg aatggttagc
     7801 aactgttgaa aatatttctt ttgaattatc taaaggagaa gttttgggta tagtagggga
     7861 atctggttgc ggtaagtcca tattaagtaa gtcaattatt aaattattac cagaaaagat
     7921 atctaaacta agtagtggag aagttatatt tgatggtaaa cgaatcgata cgctcaatga
     7981 gaagcaattg ctagatattc gaggaaatga tattgctatg atttttcaag aacctatgac
     8041 tgctttaaat cctgtattta ccataaaaaa tcaacttgtg gaatctataa aatcacataa
     8101 aaaaatttct aaaaaagaag caaataactt agcaaaagat ttactaaaaa aagttggaat
     8161 tgctagacaa gatgaaatat taaatagcta tcctcatcaa ttatctggtg gtatgagaca
     8221 aagagtaatg attgcaatgg ccatttcatg ttctcctaaa ttattaattg ctgatgaacc
     8281 tacaacagca ttggatgtca cgattcaagc gcaaatatta gacttattaa aagaattgca
     8341 aaaggaaacg caaatggcaa ttatgatgat tacacatgat ttgagtgtag ttgctgagtt
     8401 ttgcgataaa gtcttagtta tgtatgcagg tcaaattgta gaatttggag gcataaaaga
     8461 aatactacac aatccgaaac atccttatac ccaaaaatta ttatcaacaa ttccaaaact
     8521 taaagaagag cagaaacgac ttgaaacgat agaaggaatt gtgccatcaa tccaagcatt
     8581 tcacgttaat aagtgcagat ttgcaaatag atgtaacaaa aaaatggata tttgtaataa
     8641 tcaatctcct aaaatgcatg tttgtgaaga cgtcattgta cgttgtcatt tgtacaaaaa
     8701 tgaatataag gagatataag aatggaaaat attttagaag tcaaccaaat aaaaaaatac
     8761 tacaaaatta aaactggatt attacaaaaa actcagtacg ttaaagctgt tgatgacgta
     8821 tcgttttcaa taaaaaaagg acaaactttt ggattagtag gagaatcggg ttgtggtaag
     8881 tcaacgttag gtaaagtgat tatcaggctt gaagatgcaa cttcaggctc aataattgtt
     8941 aatggtgaag atataacaag attacaaggt aaaaaactca gaaaatcacg acaacaatat
     9001 cagatgatat ttcaagatcc gtatgcatca ttgaatccga tgcaaatggt tggagatatc
     9061 atttcagaac ctattttaaa ttataaaaaa ttgccaaaag aagaaataaa aaaagaagta
     9121 ctatatttat taaaatgtgt tggcctaagt gaagatgcat attataaata tgcacatgaa
     9181 ttttcaggtg gacagagaca aagagtggga attgcaagag cattggcttt gcgtccgagt
     9241 ttaattgttg ctgatgagcc tgtaagtgca ttagatgtat ctgttcaatc tcaagtactg
     9301 aatttattaa aagatttaca agaacaattt aacttaagct atttatttat cgcacatgat
     9361 ttaagtgtag taaaacatat aagtgatgtc attggagtta tgtatttagg tcatatagtt
     9421 gaaatcgcat ctgataaaga aatttatgaa aatcccaaac atccatatac aaaagcgttg
     9481 atttcatcaa taccacaaat tgataaacat aataacaata gaattatatt aaaaggagaa
     9541 ttaccttcgc caagtaatcc gccgcaaggt tgtccttttc atacaagatg tccgattgca
     9601 aaagataaat gtaaagaaaa tataccacaa ttaaaggaca ttggtgatga acatcaagtt
     9661 gcttgttttt atgtaaataa agtaggtgat ttaaatggtt aaattaatat taaagagatt
     9721 aggtttaatg attccgttac taattttaat ttctattgtt gtattttcat tagctatcat
     9781 tcaaccagga gatccatttt cagatttaca aaacggaaaa ataaaacaag aagcgataaa
     9841 tgcacaaagg gaaaagttag gcctcaacga ctctatatca catcaataca ttagatgggt
     9901 caatcatgtt atacatggtg atttagggga gtcaatcaaa tataaaaggc cggtaattga
     9961 tgttattgag gaaagaattc caaatacaat attactcggt gctatgtcat taattattac
    10021 ttatattatc tcatttgctt taggaataac gtcaggtaga tattcttaca gtttgactga
    10081 ttatactgtg caaatattta attatttgat gttagctatt ccatctttta ttgcgggagt
    10141 atttgcaatt tttatttttt cttttgaatt acaatggttt ccgtttcaag gttctgttga
    10201 tattaacctt aaagaaggta cttttgaata ttatatgagt aaaatttatc atacattttt
    10261 gcctgcatta actttaggat tattatctac tgctggttat attcaatatt tacgtaatga
    10321 tattattgaa aattctaaaa aagattatgt attgacggca aggtcaaaag gattatctat
    10381 gaataaaatt tataataaac atatattgag aaattcttta atacctatta ttacattttt
    10441 aggtgctgat attgtaagta ttttaggtgg agctgtgatt actgagacta tcttttcata
    10501 taacggtatc ggtaaattat ttttagaatc ggtaataggt caagactatc cattaatgat
    10561 ggcattaacg ttgtttttct catttttagg tttactgggt aatttgattt ctgatattac
    10621 ttatggattt atagatccaa gaattagaag taactagggg ggattggaat gcaaaataag
    10681 tcaaaatcgc cttttaaaat tgcattgtct aaatttattc ataataaaat tgcaatgtta
    10741 tcgattattt ttttattaat cataactatt gtatcaatta tagcgccatt aatagctcct
    10801 tttccagtga accaacaaga tttattaaat ataaaaggtg aaatgacagc acaaaacatt
    10861 cttggtacag actccggtgg tagggataac tttagtcgtt tgttatatgc aggtcgtatt
    10921 tcattatcca ttggaattac atctacaata ggaatgcttt tgattggaat tacagttgga
    10981 gtgatttctg gttattttgg aagtattgtt gatacattat taatgagaat aaccgaattt
    11041 gttatgttat ttccattttt aatatttgca attgtattaa atgctgcact tggagataaa
    11101 attaaaaatc cttatggatc tgccataatt cttgttctag ttattatcgt attaagttgg
    11161 ggaggtattg caagacttgt tcgtggtaaa gtacttcaag aaaaagaaaa tgaatacttt
    11221 ttggcagcaa aatcaattgg tacacccaca tataaaatta ttttgaaaca tcttttgccg
    11281 aatatattaa gtgtagttat cgtacaagca acattgttat ttgccggtat gattgtagtg
    11341 gaatcaggat tgagtttttt aggattcgga attagtaaag caatcccatc ttggggtaat
    11401 atgttgagtg atgctcaaga aggggatgtt ataagtggta aaccgtggat atggatgcca
    11461 cctgctataa tgattacatt aactatatta agtataaact ttgtaggtga agggcttaaa
    11521 gatgctttta atcctagagg tagacgttaa ataataaaca ggctgggaca taaatcccta
    11581 aaaaacagca gtaagataat tttcaattag aaaatatctt actgctgttc tctatttata
    11641 caatacttcg tatt
//
LOCUS       DAKPJH010000079        11641 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.079, whole genome shotgun sequence.
ACCESSION   DAKPJH010000079 DAKPJH010000000
VERSION     DAKPJH010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11641
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.079"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            282..1239
                     /locus_tag="OY092_001873"
                     /pseudo
     CDS             282..1239
                     /locus_tag="OY092_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001081330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            complement(1285..1416)
                     /locus_tag="OY092_001874"
     CDS             complement(1285..1416)
                     /locus_tag="OY092_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076814.1"
                     /translation="MRYVTMRQFIKRIVKTILVGYVLKFIRNKLSGKSSHSTNNKHN"
     gene            complement(1480..1695)
                     /locus_tag="OY092_001875"
     CDS             complement(1480..1695)
                     /locus_tag="OY092_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HCX1076815.1"
                     /translation="MKVNKAIYVIVALFLGGLGIHKFYADKFGQGLFHLLFFWTGIPT
                     IISIIHAIFVIFTKKADRDGYIIFPKN"
     gene            1860..2411
                     /locus_tag="OY092_001876"
     CDS             1860..2411
                     /locus_tag="OY092_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1076816.1"
                     /translation="MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKS
                     CVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWALLDLPEEIKQYGTPLP
                     VKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYQ
                     KVGFISDGQIELYKHMYHHLIVK"
     gene            complement(2463..3401)
                     /locus_tag="OY092_001877"
     CDS             complement(2463..3401)
                     /locus_tag="OY092_001877"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HCX1076817.1"
                     /translation="MSNQYQQYSTVKKYWHLMRPHTLTASVVPVLVGTAASKIYFLGS
                     EDHIKISLFIAMLLACLLIQAATNMFNEYYDYKKGLDDHESVGIGGAIVRNGMSPELV
                     LRLAIAFYILAAILGLFLAANSSFWLLPVGLVCMAVGYLYTGGPFPISWTPFGELFSG
                     VFMGMFIIVIAFFIQTGNIQSYVIWLSVPIVITIGLINMANNIRDRVKDKASGRKTLP
                     ILLGKNASLTFMAIMYFIAYAFIVLTIIIKPGGSLFYLLALLSFPMPVKVIRRFKKND
                     TPPTMMPAMAAAGKTNTFFGLLYALGIYISALFAGI"
     gene            3583..4944
                     /locus_tag="OY092_001878"
     CDS             3583..4944
                     /locus_tag="OY092_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000190617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HCX1076818.1"
                     /translation="MATGVLEDDIVKEIYDSSKEWVSVEVKLSQSLDPSTLFHLTDNE
                     AGDRFYMRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHL
                     RVVGGFQFSSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDL
                     MDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFD
                     KDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKR
                     SQDEDEDTKNVDAFLKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYH
                     LYTEIKAPLKDDSYISLIDHLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYID
                     IYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN
                     GKS"
     gene            4931..6604
                     /gene="menD"
                     /locus_tag="OY092_001879"
     CDS             4931..6604
                     /gene="menD"
                     /locus_tag="OY092_001879"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HCX1076819.1"
                     /translation="MGNHKAALTKQVFTFASELYAYGVREVVISPGSRSTPLALAFEA
                     HPNIKTWIHPDERSAAFFAVGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLI
                     VLTSDRPHELRSVGAPQAINQVNMFNNYVSYEFDMPIADDSKETIDAIYYQMQIASQY
                     LYGPHKGPIHFNLPFRDPLTPDLNATELLTSEMKILPHYQKSIDASALRHILNKKKGL
                     IIVGDMQHQEVDQILTYSTIYDLPILADPLSHLRKFDHPNVICTYDLLFRSGLDLNVD
                     FVIRVGKPVISKKLNQWLKKTDAFQILVQNNDKIDVFPIAPDISYEISANDFFRSLME
                     DTTINRVSWLEKWQRLEKKGRKEIKCYLEQATDESAFVGELIKKTSEKDALFISNSMP
                     IRDVDNLLLNKNIDVYANRGANGIDGIVSTALGMAVHKRITLLIGDLSFYHDMNGLLM
                     SKLNNIQMNIVLLNNDGGGIFSYLPQKESATDYFERLFGTPTGLDFEYTAKLYQFDFK
                     RFNSVSEFKNATLLSETSTIYELITNREDNFKQHQILYQKLSEMIHDTL"
     gene            6591..7394
                     /gene="menH"
                     /locus_tag="OY092_001880"
     CDS             6591..7394
                     /gene="menH"
                     /locus_tag="OY092_001880"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HCX1076820.1"
                     /translation="MTHYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTDICHVI
                     TIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAING
                     HIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQL
                     ELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGECDEK
                     FVQIAKKMANLIPNSKCKLISDTGHTIHVEDSDEFDTMILGFLKEEQND"
     gene            7387..8208
                     /gene="menB"
                     /locus_tag="OY092_001881"
     CDS             7387..8208
                     /gene="menB"
                     /locus_tag="OY092_001881"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HCX1076821.1"
                     /translation="MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAE
                     MIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRL
                     IRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLA
                     RIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR
                     FLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP"
     gene            complement(8446..8775)
                     /gene="sspC"
                     /locus_tag="OY092_001882"
     CDS             complement(8446..8775)
                     /gene="sspC"
                     /locus_tag="OY092_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin B"
                     /protein_id="HCX1076822.1"
                     /translation="MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRH
                     GDDTSHNQYHILFIDTAHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRP
                     IVYERLV"
     gene            complement(8813..9994)
                     /gene="sspB"
                     /locus_tag="OY092_001883"
     CDS             complement(8813..9994)
                     /gene="sspB"
                     /locus_tag="OY092_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine protease staphopain B"
                     /protein_id="HCX1076823.1"
                     /translation="MNSSYKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLE
                     INVKSDKVPQKVKDLAQQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYY
                     YPVIKDGKIVYTLTLSPKNKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLT
                     DEKGFYFEEDGKVRLVKATPLPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQ
                     EDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSE
                     QDLPNCSTFPNQMIEYGKSQGRDIHYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPN
                     DPHLGHALAVVGNAKINDQEKFIYWNPWDTELSIQDADSSLLHLSFNRDYNWYGSMIG
                     Y"
     gene            complement(10076..11140)
                     /gene="sspA"
                     /locus_tag="OY092_001884"
     CDS             complement(10076..11140)
                     /gene="sspA"
                     /locus_tag="OY092_001884"
                     /EC_number="3.4.21.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-specific serine endopeptidase SspA"
                     /protein_id="HCX1076824.1"
                     /translation="MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQT
                     DKQQTPKIQKGGNLKPLEQRERANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTF
                     IASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEG
                     DLAIVKFSPNEQNKHIGEVVKPATMSNNDETQVNQNITVTGYPGDKPVATMWESKGKI
                     TYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFINENVRNFLKQ
                     NIEDIHFANDDQPNNPDNPDNPNNPDEPNNPDNPNNPDNPNNPDNPNNPDNPNNPDNP
                     NNPDNPDNGDNNNSDNPDAA"
BASE COUNT         4053 a         1625 c         2142 g         3821 t
ORIGIN      
        1 atagggaaat gaattaacta ttgcatcgct atttatgaat cgtaaacact attatgaaat
       61 tgcaagagta gtatggacaa ttagaatgat ggtttgagat aaatgcgtgt tattaaccag
      121 tgcgtcatct tcaaattaga ggccatttgc tgtttataat aagaagattt gataatcaac
      181 tatgataaga aaaaaataat aacatcctaa atatatcata aacaaattaa atgataaaat
      241 aataatgtgg ttttctatta aagttgtttg gaggtaaatg tgtgaatagg aatatcgtta
      301 aattagttgt gtttatgcta atcttagttg tagcagtagc gggttgtgga caaaaagata
      361 ctgaagagaa aactgaaatg acgacaataa aagatgaatt aggaactgaa aaaattaaga
      421 aaaatcctaa acgtgttatt gtattagaat atagttttgc tgattattta gcagcattag
      481 atatgaaacc tgttggtatt gcagatgatg gcagcactaa aaatataaca aagtcagtaa
      541 gagataagat tggagcatat gaatcggttg gatctagacc gcaaccgaat atggaagtaa
      601 taagtaaatt aaaaccggat ttgatcattg cagatgttag cagacataag aaaatcaaat
      661 cagaattgag caaaattgcg ccgacaatca tgttagttag cggtacggga gattataatg
      721 caaatattga agcatttaaa acagtcgcta aagcagtagg caaagagaaa gaaggcgaga
      781 agcgtctgga aaagcatgat aaaataagcg gagattagaa agaaaattga acagagtacg
      841 ttaaaatctg catttgcatt cggtatctca agagcaggta tgtttattaa taatgaagat
      901 acatttatgg gacaattctt aattaaaatg ggtattcaac ctgaagtcac aaaagacaaa
      961 actgcgcatg ttggtgaacg caagggtggc ccttatatat atttaaataa tgaagagctt
     1021 gccaatatca atccaaaagt tatgatttta gctacgaatg gaaaaacaga taaaaataga
     1081 acgaaattca ttgatcctgc agtttggaaa tcattaaaag ctgtgaaaga taataaagtt
     1141 tatgacgttg accgaaataa gtggttgcaa tcaagaggta ttatcgcaag tgaaagtatg
     1201 gcagaagatt tagagaaaat tgcagaaaaa gcaaaataaa aatacagcgc cactcggaaa
     1261 tcatataaga gtggcgctgt atttttaatt atgtttgtta tttgttgaat gtgatgattt
     1321 acctgaaagt ttatttcgaa taaattttaa tacataaccg acaaggattg ttttaacaat
     1381 tcttttaatg aattgacgca tcgttacata cctcatttct ctttatctta tgaactatat
     1441 acccattcat atatgctttt taaacgtcat tgtcacaatt taatttttag ggaatataat
     1501 ataaccgtct ctgtctgctt ttttagtaaa aatgacaaaa atggcatgta ttattgagat
     1561 gatggtaggg atacctgtcc agaaaaataa taagtgaaaa agaccttgtc caaatttatc
     1621 agcataaaat ttatgaatac ctaaacctcc aagaaataat gcaacaataa cataaatggc
     1681 tttattgact ttcatttgta aatcctcctt aactataatt ctacttaaat tcgttgtgaa
     1741 aaccaatatt tctaacttta gaattttcaa actttctaaa attataagta tatcttttta
     1801 aaataagcta gaatttctat ataataaatg ttaataacgt aaaagggaat gatgacatag
     1861 tgatacgtca agcacgtcca gaggaccgat ttgatattgc gaagttagtt tatatggttt
     1921 gggatgatat ggaattagaa ttggtaaagc atctacctaa agacatggta ttagatgcaa
     1981 ttgaaaaaag ctgtgttgat gcaacatatc gaacttttta tcagcatatt ttagtttatg
     2041 aagtagaaaa taaagtagca ggttgtatta ttagctatag cggtgaaaat gaattgaaat
     2101 atgaaaaagc atgggcacta cttgacttac cagaagaaat aaaacaatat ggcacgccat
     2161 tacctgtaaa agaagctaaa gacgatgagt attatataga aacaattgcg acatttgcag
     2221 catatagagg tagaggcatt gcgacaaagt tattaacgtc attacttgaa tcaaatacac
     2281 atgttaaatg gagtttgaat tgcgatatta ataatgaagc agcattaaag ttatatcaaa
     2341 aagtaggttt tatatctgat ggacagattg aattatacaa gcacatgtat catcatttaa
     2401 ttgttaaata aaaaaactcg acagttcgaa gtaagtcgat tgccgagtag tatcatttta
     2461 tattaaatgc ctgcaaataa tgcgctaata taaataccta atgcatataa taaaccgaaa
     2521 aatgtatttg ttttaccagc agcagccatt gctggcatca ttgtaggcgg tgtatcattc
     2581 ttcttgaaac gtctgataac tttaacaggc attgggaatg ataacaacgc aagtaagtaa
     2641 aataatgagc caccaggttt aataatgatc gtaagtacaa taaaggcata agcgataaag
     2701 tacatgattg ccataaatgt taaagaagca tttttaccta atagaatggg taaagtttta
     2761 cgaccacttg ctttatcttt gacacggtcg cgaatattgt tagccatatt aattaaaccg
     2821 atagtgatta ctataggtac acttaaccaa attacatagc tttgaatatt gccagtttga
     2881 ataaagaatg caataacgat aataaacata cccataaata cgcctgagaa taattcaccg
     2941 aaaggcgtcc atgaaatagg gaaagggcca cctgtatata ggtaaccaac agccatacat
     3001 actaatccaa ctggtaataa ccaaaatgaa gagttagcag ctaaaaacaa acctaatatt
     3061 gctgctaaga tgtaaaatgc aatggctaat cgtagcacaa gctctgggct cataccgttg
     3121 cgtacaattg caccaccaat gcctacagat tcatgatcat caaggccttt tttataatca
     3181 tagtattcgt taaacatatt agttgctgct tgaataagta agcatgctag taacatggca
     3241 atgaataggc tgattttaat atgatcttcg ctaccaagaa aatatatttt agatgctgct
     3301 gtaccaacta aaacgggtac tacggaagca gttaatgtat gaggacgcat taaatgccaa
     3361 tatttcttaa ctgtagaata ttgctgatat tgattactca ttgaatacaa aacctcttta
     3421 aatcatattt tttataacaa agatatttta atagaaagta gcataaaggt caattgacgt
     3481 gaaaaattgc aagataagtt taagcaattc ttgtaacaca attatccaaa aatgatacaa
     3541 tataataatg agtgaaaaaa gacgaagaaa gaagtgaaat ggatggctac gggcgtatta
     3601 gaggacgata ttgtcaaaga gatatatgac agctcaaagg aatgggtttc agttgaagtg
     3661 aaattatcac agtcactaga cccgagcaca ttatttcatc tcactgacaa tgaggcagga
     3721 gatcgctttt atatgcgttt gaatgataat cgaacgtcat attttggcta caaagcaatt
     3781 caattattca aaaataattc taaaaataaa caatctattt ttaaagactg ggaaaaatta
     3841 aaacataaca tcacatttat acatccgcaa tctgagaaac atcatcttcg agttgttgga
     3901 gggtttcaat tttcaagtca taaatcagat gatgaatggc gagagtttgg actaaatcat
     3961 tttgtattac ctgaagtttt aatttcaact gataataatg ggacattttt aacttataca
     4021 gttaaaaggg aaagttttac tgttgaggca ttgaacgatt taatggattt gttcaacaat
     4081 atatcggaca tagatgtgga cgagcaaatt ggggaaatta ctagaaatga agatatttat
     4141 aaagatgatt ggcgtcaact tgtagtagaa gctatagaat ctattaataa tgaagaaaaa
     4201 attgtactag cacgtagacg gttaataaag ttcgataaag atatcagtat tccatatatt
     4261 ctaaagcaag catattctaa agaaaaaaac agttatatat tcttgttaga atcacaagat
     4321 tctatattct tttcacaaac acctgaacaa ttaataaagg tcaataataa aatactatcg
     4381 actaaagctg tagcaggtac aattaaacgt tcacaagatg aggacgaaga tacaaaaaat
     4441 gttgacgcat ttttaaaaga taataaaaac ttaattgaac atcgatttgt tgttgacagt
     4501 attttacatg atattaaacc ttatatcact gaattacatt atgataagac gcctaaaatt
     4561 ctaaaaaatg atcatttata tcacttatac actgaaataa aggcgccact gaaggatgat
     4621 tcgtatatta gtttaattga tcatttacat ccaacacctg ctttaggtgg ctatccaaaa
     4681 gaatttgcaa tggattttat tgagcagaaa gaatttggta cgcgaggatt atatggtgca
     4741 ccggttggct atatagatat atacgatgat tgtgaattta ttgttgcaat tcggtcaatg
     4801 ctgattaaga aagcacaagc aacattattt gcagggtgtg gcattgttaa agattctgat
     4861 ccagatagtg aattggcaga aacgaacctt aagttcacac ctatgatgaa tgcattagga
     4921 gtcgatatga atgggaaatc ataaagcagc tttaacgaag caagttttta catttgcatc
     4981 tgagttatat gcgtacggcg taagggaagt agttatcagt ccgggatcac gctcaacgcc
     5041 acttgcactt gcatttgaag cacatccaaa tattaaaaca tggatacacc ccgatgagcg
     5101 aagtgcagct ttttttgcgg taggattaat taaaggcagt gaaagacctg tcgctatatt
     5161 atgtacgtca ggtacagcag cagcgaatta tacgcctgca attgctgaaa gccaaattag
     5221 tagaattcct ttaatcgttt taacaagtga ccgtccgcat gaattaagaa gtgtaggcgc
     5281 accacaagcg attaatcaag taaatatgtt taataattat gtaagttatg agttcgatat
     5341 gcctattgca gatgatagta aagagaccat tgatgcaatt tattatcaaa tgcaaattgc
     5401 tagtcaatat ttatatggac cacataaagg gccaattcat tttaacttgc catttagaga
     5461 tccgttaaca cctgatttga atgcaacaga attgttaact tctgagatga agattttacc
     5521 gcactatcaa aaaagtatag atgcatcggc attaagacac attttaaata agaaaaaagg
     5581 tttaattatt gtaggggata tgcagcacca agaagttgat caaatactga cgtattcaac
     5641 gatatatgat ttgcctattt tagctgatcc tttaagtcat ttaagaaaat ttgatcatcc
     5701 gaatgttatc tgtacatatg atttgctgtt tagaagcggc ttagacttaa atgtggattt
     5761 cgtaattcgt gttggaaaac cagtgatttc taaaaagttg aatcaatggt taaagaaaac
     5821 tgatgcattt caaatattag tgcaaaacaa tgataagatt gatgtctttc cgatagcccc
     5881 agatatttca tatgagattt ctgcgaatga tttctttagg tcattaatgg aagacacgac
     5941 catcaatcga gtaagttggt tagaaaaatg gcaacgctta gagaaaaaag ggcgtaaaga
     6001 aattaaatgt tatttggaac aagctacaga tgagagtgca ttcgttggtg aattgattaa
     6061 gaaaacatct gaaaaagatg cattatttat tagtaatagt atgcctatca gagatgtaga
     6121 taacttgtta ttgaataaaa atatagatgt ctatgcgaat cgtggtgcga atggtattga
     6181 tggtatcgtt tcaactgcac tgggtatggc tgtgcataaa cgaataacat tattgatagg
     6241 tgatttatca ttttatcatg atatgaatgg actattaatg tcaaaattaa ataatattca
     6301 gatgaatatt gtattattga acaacgatgg tggcggtatt ttttcatatt taccacaaaa
     6361 agaaagtgca actgactatt ttgaacggtt gtttggcaca ccgacgggat tggattttga
     6421 gtatacagct aagttatatc aattcgattt taaacgtttt aacagtgttt cagaatttaa
     6481 aaatgccaca ttgttatctg aaacttcgac gatttatgaa ttgataacga atcgcgaaga
     6541 taactttaaa cagcatcaaa ttttatatca gaaattgagt gaaatgattc atgacacatt
     6601 ataattacta tgaagcaaac gttgagacca atcaagtttt agtattactg catggttttc
     6661 ttagcgacag tcgtacttat cataatcaca tcgataaata tactgatatc tgtcatgtca
     6721 tcactataga cttaccagga catggcgaag atcagtcttc aatggatgaa acgtggaatt
     6781 ttgattatat tacgacgttg ttagaccgaa ttttagataa atataaagat aaatcaataa
     6841 cattgtttgg atattcaatg ggtgggcgtg ttgcgttata ttatgcaatt aatggtcaca
     6901 tccctatatc taatttgata ttagaaagta cgtcaccagg tattaaagaa gaagcaaatc
     6961 aattggaacg ccgtcttgtt gatgatgcac gtgctaaagt attagacata gcaggtattg
     7021 aattatttgt taatgattgg gaaaagttgc cattatttca atcgcaacta gaattaccag
     7081 ttgaaataca acatcaaata agacaacaac gattgtctca atcgccacat aaaatggcca
     7141 aagcattaag agattatggt acaggtcaaa tgccaaactt atggccgcgc ctgaaagaaa
     7201 ttaaagtacc aacattaata ttagctggag aatgtgatga aaaatttgta cagattgcga
     7261 aaaaaatggc aaatttaatt cctaatagta aatgtaaatt aatttctgat acaggtcata
     7321 caattcatgt ggaagatagt gatgaatttg atacaatgat attaggattt ttaaaggagg
     7381 agcaaaatga ctaacagaca atgggaaaca cttagagaat atgatgaaat caaatatgaa
     7441 ttttacgaag ggattgctaa ggtaacaata aatcgccctg aagtacgcaa tgcgtttaca
     7501 cctaaaacag ttgctgaaat gattgacgca ttttcacgtg cacgtgatga tcaaaacgtt
     7561 tcagttatcg tattaactgg tgaaggtgat ttagcattct gttctggtgg tgaccagaag
     7621 aaacgtggac atggtggtta tgtaggtgaa gaccaaatcc ctcgcttaaa tgtattagat
     7681 ttacaacgtt taattcgtat tattccaaaa ccggttatcg cgatggtaaa aggttatgct
     7741 gtaggtggcg gtaatgtact aaatgttgtt tgtgacttaa cgattgctgc tgataatgct
     7801 atttttggac aaactggtcc taaagtaggt tcatttgatg cgggttatgg ttcaggatat
     7861 ttagcacgta tcgttggaca taagaaagca cgtgaaattt ggtacttatg tcgtcaatac
     7921 aatgcacaag aagctttaga tatgggtcta gtaaatacag tggtaccttt agagaaagtt
     7981 gaagatgaaa ctgtgcaatg gtgtaaagag attatgaaac actcaccaac agctttacga
     8041 ttccttaaag cagctatgaa tgctgacaca gatggtttag ctggtttaca acaaatggct
     8101 ggggatgcaa cattgcttta ttacacaact gatgaagcga aagaaggccg tgatgcgttt
     8161 aaagaaaaac gtgatcctga cttcgatcaa ttccctaaat tcccataagt tattttgaat
     8221 atgatattaa gtcacttgcg tcgtttatta gcgacgatag gtggcttttt tattttataa
     8281 gaatttaaaa gggaatttta attaattatc ataaagataa ggtagtttga gtaaattaat
     8341 agagaaagaa taaatgttaa agattattat tacaatgaaa aaacgagctg gtgagaaatt
     8401 gaattctcgc caacccgctt tatgaagtga aatcatttaa attagttata ctaagcgctc
     8461 ataaacgatt ggtcgcgaag tgccaatacc ttgtttggat gacgtttgca tgaggatatg
     8521 ctgtgtatca tcataatcaa gaatataaat gatttcttca ttatcaatag atgaaaattt
     8581 aatgcgttga tgtgccgtat ctataaaaag aatatgatat tgattgtgac ttgtatcatc
     8641 gccatgacgt atacaaattg atttttgtaa ttgatgatta ctccaattac caatgaataa
     8701 attgatattg gtttgttcta gatgtgtgag tttggttgtg tcgtaaacta aatttataaa
     8761 ttgtagttga tacatagttt tacctgcctt taatcaatat ctatattact ttttagtaac
     8821 ctatcattga accataccag ttataatcac gattgaatga taaatgtaat aggcttgaat
     8881 ctgcatcttg gattgataat tctgtatccc aaggattcca gtaaataaat ttttcttggt
     8941 cattaatttt agcattacca acaactgcta gcgcatgtcc taaatgtggg tcattagggt
     9001 tttgagatac actttgtgca aggatcataa ttcctacatt atcttttgta agttgatcaa
     9061 cttgttcata tgatggtacg ccttcttgat aatgaatatc tctgccttgt gatttaccgt
     9121 attcaatcat ttgattaggg aatgttgagc aattaggaag gtcttgttca cttacttctg
     9181 ggtataatgt acgcataata tcatgtgcat tataagtgtc tgtattttta gttgcattta
     9241 ataatgctgc catactgaaa cctgcacacc atgagttatc gaattgttgt tctctaattt
     9301 tgaagttttt taatgtattt tcatattgaa cttgatcttc ttgtatcgct tcgttttctt
     9361 caactttagt aggtgttact gtatttttta actcttgttt caattttgct gaaactgttt
     9421 tagcactttc tttttctttt acattaccag gtagtggcgt agcttttact aatctaactt
     9481 tgccatcttc ttcaaaataa aacccttttt catcagtaag aacagtgata tttgaatttt
     9541 tatctttaat ttggtctaaa tctttagcga tgaagtttga aattttaaca ctgtaattca
     9601 tgtcttcttt tgatttgttt aaatcatctt tatttttagg gctaagtgtt aaagtataaa
     9661 caattttacc gtcttttata actggataat agtaactatt atcttcttca ccattaaatt
     9721 tataaatttt aaaagcttcg ccaagttcat atttaccagt ttttgcatta ctttgtttat
     9781 ctaatgcttt agcataacca gcaaattgtt gttgtgctag atcttttact ttttgaggta
     9841 ctttgtcact cttaacatta atttctagct gtttagagtg tgaatcggct ttggctttat
     9901 tgttattagc aaatgcgcct agtgataaaa taagcattga aaccattatg atgcttataa
     9961 tattgaatac tctagattta tatgaactat tcatataata ccctccattt aaatcaaaat
    10021 attttgcgtt gctaagactt tgcttatatt ttatctagac gaacttaatt gttaattaag
    10081 ctgcatctgg attgtctgaa ttattgttat cgccattgtc tggattatca gggttattag
    10141 ggttgtcagg gttattagga ttgtccggat tattaggatt gtccggatta ttaggattgt
    10201 ccggattatt aggattgtct gggttatttg gttcatctgg gttgttaggg ttatcaggat
    10261 tatctgggtt attaggttgg tcatcgttgg caaaatggat atcttcaata ttttgtttta
    10321 agaagttgcg tacattttca ttaataaata ccgcaccatt aaattcattt ggtacaccgc
    10381 cccaatgaat tccgattact tcattttttt cattaaatac aggtgaacct gagttaccac
    10441 cagttgtact taaatcatat tgcatagctt cgcctttgag gtaagtgatt tttcctttac
    10501 tttcccacat tgttgctaca ggtttatcac caggatatcc tgttacagta atattttggt
    10561 taacttgtgt ttcatcatta ttactcattg ttgctggttt aactacttcg cctatatgtt
    10621 tgttttgctc attaggggag aatttaacga ttgctaaatc accttcgcct gaatatttag
    10681 tgatttgttc agcagtgaaa ccaccatttg gataattgtc ttggttaatt gcagaaggga
    10741 atgcttttaa agcatgagga tcaccgtgcg tagcatctac gacgtgttta tttgttaaaa
    10801 gtgtatcttt acctacaact acaccggaag caataaatgt accagtaggt gcttcaactt
    10861 gaatataagt aacaggtgca taatgaccat tcgttgtatc tgtgatttgg tgacgatcgt
    10921 tatttggtaa tataacatta gcgcgttcac gttgttctaa tggtttaagg ttaccgcctt
    10981 tttgaatctt aggtgtttgc tgtttgtctg tctgcgtttg ttgtggatga ttgtccatag
    11041 cttttgaaga taacgcattt gctgctggag aactcacaag tgtcgctgtt gtcaaagttg
    11101 caacgaataa agaactaact tttaaaaatt tacctttcat ctaaaaacct ccaaaaaatt
    11161 tatttacaag ttaaatataa cactaaaatt ttttaagtca ataagaatat ataaataaat
    11221 taaaaagttt ttgtaaagat tagagtttac aaaaacatta agggaattaa aattgaattg
    11281 tattatactt tattcgattg tgttaaattg ataaggttgt caattgtttg catttatcta
    11341 aaagaataaa taggtaagca attgaggact aagggaaagt atttgattat aataataaat
    11401 agtaactttt gaataataat tgtttagcca aaggtagatt tatatgaatg gtgatatatt
    11461 atttgagtgc ttaagtttcg aagaacaatt ataagttagc atattaaaac cttttgatag
    11521 aatcattttg agtgaggtgt ttaaaggaga ggaatgtaac tcggtagtat ttacagtctc
    11581 tatagagtat tatttaaaac ttatagaaaa taaaaaactg aacgtactat gaatttagtt
    11641 c
//
LOCUS       DAKPJH010000080        11532 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.080, whole genome shotgun sequence.
ACCESSION   DAKPJH010000080 DAKPJH010000000
VERSION     DAKPJH010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11532
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.080"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            63..590
                     /gene="isaB"
                     /locus_tag="OY092_001885"
     CDS             63..590
                     /gene="isaB"
                     /locus_tag="OY092_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunodominant staphylococcal antigen IsaB"
                     /protein_id="HCX1076825.1"
                     /translation="MNQTTKLCAATTLALGTLIGATVVGTASPIHQETQAATTPYYTY
                     HGYIGHNANFIMDKHFINAIKYDNVTFNGIKLAKTNATKKVEKYDQTFKGVTAKGNEA
                     NQLQFIVKNNISLKDIQKAYGKDLKKENNKTKESDSGIFYYQHSKKSLGIWFVVDHNR
                     VVEVTVGHTPYKTSK"
     gene            1003..2532
                     /gene="aur"
                     /locus_tag="OY092_001886"
     CDS             1003..2532
                     /gene="aur"
                     /locus_tag="OY092_001886"
                     /EC_number="3.4.24.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloproteinase aureolysin"
                     /protein_id="HCX1076826.1"
                     /translation="MRKFSRYAFTSMATVTLLSSLTPAALASDTNHKPATSDINFEIT
                     QKSDAVKALKELPKSENVKNHYQDYSVTDVKTDKKGFTHYTLQPSVDGVHAPDKEVKV
                     HADKSGKVVLINGDTDAKKVKPTNKVTLSKDEAADKAFNAVKIDKNKAKNLQDDVIKE
                     NKVEIDGDSNKYIYNIELITVTPEISHWKVKIDADTGAVVEKTNLVKEAAETGTGKGV
                     LGDTKNININSIDGGFSLEDLTHQGKLSAYNFNDQTGQATLITNEDENFVKDEQRAGV
                     DANYYAKQTYDYYKNTFGRESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGD
                     GDGRTFTNLSGANDVVAHELTHGVTQETANLEYKDQSGALNESFSDVFGYFVDDEDFL
                     MGEDVYTPGKEGDALRSMSNPEQFGQPSHMKDYVYTEKDNGGVHTNSGIPNKAAYNVI
                     QAIGKSKSEQIYYRALTEYLTSNSNFKDCKDALYQAAKDLYDEQTAEQVYEAWNEVGV
                     E"
     gene            2899..3348
                     /locus_tag="OY092_001887"
     CDS             2899..3348
                     /locus_tag="OY092_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HCX1076827.1"
                     /translation="MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYFGVRYSATTIAK
                     DLKELNIYRVPIDCETWIYKAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSP
                     GFAQGINYFIDQLNIEEILGTVSGNDTTLILTASNDMAEYVYAKLFK"
     gene            3351..3518
                     /locus_tag="OY092_001888"
     CDS             3351..3518
                     /locus_tag="OY092_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076828.1"
                     /translation="MYQMNNENLFRITCTQVSYQILTCVRVFLWKERIHSHSFDCIKN
                     FIQHVFMGIFE"
     gene            3695..4930
                     /gene="arcA"
                     /locus_tag="OY092_001889"
     CDS             3695..4930
                     /gene="arcA"
                     /locus_tag="OY092_001889"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HCX1076829.1"
                     /translation="MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIP
                     YLEVAQKEHDHFAQVLREEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGH
                     EEEIKALFATLSNQELVDKIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTR
                     DPQASIGHGITINRMFWRARRRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGD
                     ELVLSKDVLAIGVSERTSAQAIEKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVF
                     TMIDYDKFTMHSAILKAEGNMNIFIIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQF
                     IPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNDLLRQKGIKVIEISGSEL
                     VRGRGGPRCMSQPLFREDI"
     gene            4963..5973
                     /gene="argF"
                     /locus_tag="OY092_001890"
     CDS             4963..5973
                     /gene="argF"
                     /locus_tag="OY092_001890"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCX1076830.1"
                     /translation="MTEIQKPYDLKGRSLLKESDFTKAEFEGLIDFAITLKEYKKNGI
                     KHHYLSGKNIALLFEKNSTRTRAAFTVASIDLGAHPEFLGKNDIQLGKKESVEDTAKV
                     LGRMFDGIEFRGFSQQAVEDLAKFSGVPVWNGLTDDWHPTQMLADFMTIKENFGYLEG
                     INLTYVGDGRNNIAHSLMVAGAMLGVNVRICTPKSLNPKEAYVDIAKEKASQYGGSVM
                     ITDNIAEAVENTDAIYTDVWVSMGEESEFEQRINLLKDYQVNQQMFDLTGKDSTIFLH
                     CLPAFHDTNTLYGQEIYEKNGLAEMEVTDQIFRSEHSKVFDQAENRMHTIKAVMAATL
                     GS"
     gene            6064..7494
                     /gene="arcD"
                     /locus_tag="OY092_001891"
     CDS             6064..7494
                     /gene="arcD"
                     /locus_tag="OY092_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine-ornithine antiporter"
                     /protein_id="HCX1076831.1"
                     /translation="MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAII
                     IGWIITAIGMISLAFVFQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLG
                     NVAYATLLMSAVGNFFPIFKGGNTLSSIIVASILLWGVHFLILKGVETAAFINSIVTV
                     AKLIPILLVIICMIIAFNFDTFKTGFFGMTSEGVLPFSWASTMSQVKSTMLVTVWVFI
                     GIEGAVIFSSRAKNKKDVGSATVIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMA
                     QVLATIVGGWGSTLVNIGLIISVLGAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNG
                     APVNALLITNILVQLFLISMLFTQSAYQFAFSLASSAILYPYMFSAFYQVKYTLEHRQ
                     QATTKQWTIGIIASIYAIWLIYAAGINYLLLTMLLYIPALLVYSIVQKNNQTRLIKSD
                     YILFMIIIVLAVIGLIKLLMGTINVF"
     gene            7511..8452
                     /gene="arcC"
                     /locus_tag="OY092_001892"
     CDS             7511..8452
                     /gene="arcC"
                     /locus_tag="OY092_001892"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCX1076832.1"
                     /translation="MKEKIVIALGGNAIQTKEATAEAQQTAIRRAMQNLKPLFDSPAR
                     IVISHGNGPQIGSLLIQQAKSNSDTTPAMPLDTCGAMSQGMIGYWLETEINRILTEMN
                     SDRTVGTIVTRVEVDKDDPRFNNPTKPIGPFYTKEEVEELQKEQPDSVFKEDAGRGYR
                     KVVASPLPQSILEHQLIRTLADGKNIVIACGGGGIPVIKKENTYEGVEAVIDKDFASE
                     KLATLIEADTLMILTNVENVFINFNEPNQQQIDDIDVATLKKYAAQGKFAEGSMLPKI
                     EAAIRFVESGENKKVIITNLEQAYEALIGNKGTHIHM"
     gene            8551..9255
                     /locus_tag="OY092_001893"
     CDS             8551..9255
                     /locus_tag="OY092_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HCX1076833.1"
                     /translation="MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYT
                     KGQVIYFSPQESSNIYFLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNE
                     LCTALTDCTVLGLPRELMAFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDR
                     IIKLLCHLCQTVGYDQDEFYEIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKD
                     HKNWLVSKHLFNDVCV"
     gene            9605..>11532
                     /gene="clfB"
                     /locus_tag="OY092_001894"
     CDS             9605..>11532
                     /gene="clfB"
                     /locus_tag="OY092_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfB"
                     /protein_id="HCX1076834.1"
                     /translation="MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQA
                     SEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTAKPMST
                     QTSNTTTTEPASTNETPQPTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANNIATN
                     SELKNPQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDK
                     VTASDFKLEKTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNS
                     NNTMPIADIKSTNGDVVATATYNILTKTYTFVFTDYVNDKENINGQFSLPLFTDRAKA
                     PKSGTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQ
                     TVFVNPKQRVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADP
                     NDSNLKEVTNEFKDKITYKYQNVASINFGDITKTYVVLVEGHYDNTGKNLKTQVIQEN
                     IDPATGKDYSIFGWNNENVVRYGGGSADGDSAVNPVDPTPGPPVDPEPSPEPEPEPTP
                     DPEPSPDPEPEPTPDPEPSPDPEPEPTPDPEPSPDPDSDSDSDSDSDSNSDLDSDSGS
                     DSDSDSDSDSDSDSDSDL"
BASE COUNT         4303 a         1662 c         2186 g         3381 t
ORIGIN      
        1 tacaagcaag ttataataat agtaataaga ttgaaaaatt tgtatggaaa agagagataa
       61 atatgaatca aacaactaaa ctttgtgcag caacgacatt agcattaggt actttaattg
      121 gcgcaacagt tgtagggact gcatcaccaa tacatcaaga aacgcaggcg gcaacaacac
      181 cttactatac ttatcatgga tatatcggtc ataacgctaa ttttataatg gataagcatt
      241 ttattaacgc tattaaatat gacaacgtga catttaatgg tattaaatta gcgaagacaa
      301 atgcgacaaa aaaagtagag aaatacgatc aaacttttaa aggtgtaact gcaaaaggaa
      361 atgaagcgaa tcaattacaa tttatcgtta aaaataatat atcactaaaa gatattcaaa
      421 aagcttatgg taaagatttg aaaaaagaga ataataaaac gaaagaatct gatagcggta
      481 ttttttatta tcaacattct aaaaagtcat taggcatttg gtttgttgtt gatcataata
      541 gagtggttga agttacagtg ggacatacgc catacaaaac gagtaaataa taaagtaaat
      601 ataggggcta gtttgtgagg aatgatgtca catactagtc tttttgatta tatgatggta
      661 gttttcgtgt ctccatgata ttgaaatata tagatttaat catgcgcagt taagtagtca
      721 gcatatatat ttcacgtatt gattaagtat gtgttgtact aattttttga ttgttaataa
      781 tttcacaaaa ataaagcctt gataaatttt aaaatataat taagtgcaat tttcaaaatt
      841 ttatttagtc acagataaca tttttaaaaa agaaaataat caataaataa aatcaacgaa
      901 caaaaagtat agaaataaat agaaataatc gtttactttt ctgaaaaatt aaattaatat
      961 tttatttata agctgttttt aaaatttcag gaggaatgaa atgtgaggaa attttcaaga
     1021 tatgcattta caagtatggc gacagtaacg ttgctgagct ctttgacacc tgcagcacta
     1081 gcgagtgata cgaatcacaa accagcaact tcagatatta attttgaaat cacacaaaag
     1141 agtgatgcag ttaaagcatt aaaagagtta cctaaatctg aaaatgtgaa aaatcattat
     1201 caagattact ctgttacaga tgtaaaaaca gataagaaag gatttacgca ttacacgtta
     1261 caaccgagtg tggatggtgt tcatgcacct gacaaagaag tgaaagtaca cgcagacaaa
     1321 tcaggaaaag tcgttttaat caacggtgat actgacgcaa agaaagtaaa gccgacaaat
     1381 aaagtgacat taagcaagga tgaagcggct gacaaagcat ttaacgcagt taagattgat
     1441 aaaaataaag ctaaaaacct ccaagatgac gttatcaaag aaaataaagt cgaaatcgac
     1501 ggtgacagta ataaatacat ttacaatatt gaattaatta cagtaacacc agaaatttca
     1561 cattggaaag ttaaaattga tgccgacaca ggagcagttg ttgaaaaaac gaacttagtt
     1621 aaagaagcgg cagaaactgg tacaggtaaa ggagtactcg gcgatacaaa aaatatcaat
     1681 atcaatagta ttgacggtgg atttagccta gaagatttaa cgcatcaagg taaattatca
     1741 gcatacaatt ttaatgatca aacaggtcaa gcaacattga ttactaatga agatgaaaac
     1801 ttcgtcaaag atgagcaacg tgctggtgta gatgcgaatt attatgctaa acaaacatat
     1861 gattactaca aaaatacatt tggtcgtgag tcttacgata accatggtag tccaattgtc
     1921 tcattaacac atgtaaatca ttatggtgga caagataaca gaaataacgc tgcatggatt
     1981 ggagacaaaa tgatttatgg tgatggcgat ggccgcacgt ttacaaattt atcaggtgca
     2041 aatgacgtag tagcacatga gttaacacat ggcgtgacac aagaaacggc gaatttagag
     2101 tataaagatc aatctggtgc gttaaatgaa agcttttcag atgtttttgg atactttgta
     2161 gatgatgagg atttcttgat gggtgaagat gtttacacac caggaaaaga gggagatgct
     2221 ttacgaagca tgtcaaaccc agaacaattt ggtcaaccat ctcatatgaa agactatgta
     2281 tacactgaaa aagataacgg tggtgtgcat acgaattctg gcattccaaa taaagcagct
     2341 tataacgtaa ttcaagcaat agggaaatct aaatcagaac aaatttacta ccgagcatta
     2401 acggaatact taacaagtaa ttcaaacttc aaagattgta aagatgcatt ataccaagca
     2461 gctaaagatt tatatgacga gcaaacagct gaacaggtgt atgaagcatg gaatgaagta
     2521 ggcgtggagt aaaaatatat aaacaagaag aagtaatgtt aaacacttat aaataattaa
     2581 attttaaata cagcttatat atggggtata cctacattga taattgactt tgtaggtata
     2641 ccctctcttt gtaattagat gagaggagtg tgagggttgt ctgccgaaag actactcggc
     2701 agtctaaaat cattacaagt agtagatatg tgataattaa atgctgactt agaatacaaa
     2761 attcatttta aaagttgtca caaaaaattt acatgtattt ttattatctt ttgcaaaaca
     2821 aagtgttaaa ttataaatga aacatgcatg aatttatttt ttaatacaag aaacgtaact
     2881 accaaaggag tttacaatat gaagaaaagt aaacgattag aaattgtttc tacaatagtt
     2941 aaaaagcata agatttataa aaaagaacaa atcatttcat atattgaaga atattttggt
     3001 gtaagatata gtgcaacaac aattgctaaa gacttgaaag aacttaatat atatcgtgtc
     3061 cctatcgatt gtgaaacatg gatttataaa gctattaata atcaaacaga acaagagatg
     3121 agagaaaagt ttagacacta ttgtgaacat gaagttctaa gttcaatcat caatggttca
     3181 tacattatcg ttaaaacctc acctggtttc gcccaaggca taaactattt tatcgatcag
     3241 ctaaatatag aagagatatt aggtacggtg agtggaaatg acactacatt aatcttaact
     3301 gcctcaaatg atatggcaga atacgtatat gcaaaattat ttaaatagac atgtatcaaa
     3361 tgaataatga aaatttgttt cgtatcacgt gtactcaagt tagttaccaa atattaactt
     3421 gtgtacgcgt ttttttatgg aaagaaagaa ttcatagtca ttcatttgac tgtataaaaa
     3481 actttataca acatgttttt atgggtattt ttgaataaaa aatgtatatt tagacccaaa
     3541 acacctttat ttatgtataa aaatccatta ttatgtattg tataacaaaa agatatgaaa
     3601 ttttcgactt tctttatgtg aatataatca catgtaagcg tttgaagatt gtctatactc
     3661 taaatgaatt caaagataaa aggaggaaat agacatgaca gatggtccaa ttaaagtaaa
     3721 tagcgaaatt ggagctttaa aaactgtgtt acttaagcgt cctggaaaag aattagaaaa
     3781 tttagtacct gattatttag atggattact atttgatgat attccatatt tagaagtagc
     3841 tcaaaaagag catgaccatt ttgcacaggt gctaagagaa gagggtgttg aagtacttta
     3901 ccttgagaag ttagcagctg aaagtattga aaatcctcaa gtaagaagtg aatttattga
     3961 tgatgtatta gcagagtcta aaaaaacaat attaggtcat gaagaagaaa ttaaggcatt
     4021 atttgcgaca ctttctaatc aagaacttgt agataaaata atgtcagggg tacgtaagga
     4081 agaaattaat ccgaaatgta cacatctagt agagtatatg gatgataagt atccattcta
     4141 tttagatcca atgccaaacc tttattttac tagagatcca caagcctcaa taggacacgg
     4201 tataacaatc aatcggatgt tctggagagc acgacgacga gaatcaatat ttattcaata
     4261 tattgtaaag catcatccta gatttaaaga tgcgaatatt ccaatctggt tagatcgaga
     4321 ttgcccattc aatattgaag gcggcgatga acttgtttta tctaaagatg tcttggctat
     4381 aggcgtttca gaacgtacat ctgcacaagc tattgaaaag ttagcgcgac gtatttttga
     4441 aaatccgcag gcgacgttta aaaaagtagt agcaattgaa attccaacta gtcgaacttt
     4501 tatgcactta gatacagtat ttacaatgat agattatgac aaatttacaa tgcattcagc
     4561 cattttaaag gcagaaggca atatgaatat atttattatt gaatatgatg acgtaaataa
     4621 agatattgcc atcaaacaat ctagtcattt aaaagatact ttagaagacg tactaggtat
     4681 agatgatatc caattcattc caacaggaaa tggtgatgtc attgatggtg ctagagagca
     4741 atggaatgat ggctcaaata cattatgtat aagaccaggc gttgtagtga cttacgatag
     4801 aaactatgta tcgaatgatt tattgagaca aaaaggcatt aaagtcattg aaatatctgg
     4861 tagcgagttg gtacgtggac gtgggggtcc tagatgtatg agtcaaccac tattcagaga
     4921 agacatttaa cgtaataaat tatagaaacg agggtgaaaa taatgacaga aattcaaaaa
     4981 ccgtatgatt taaaaggcag atcattatta aaagaaagtg attttaccaa agcagaattc
     5041 gaaggactta ttgattttgc aattacatta aaagagtata agaaaaacgg tattaagcat
     5101 cattacttat ctggaaaaaa tattgcacta ctattcgaaa agaattcgac gagaacgcgt
     5161 gcagcgttta cagttgcgtc tattgattta ggtgcgcatc cagaattttt agggaaaaat
     5221 gatattcaat taggcaaaaa agaatctgta gaggatactg cgaaagtatt aggtagaatg
     5281 ttcgatggta ttgaattccg tggtttttca caacaagctg ttgaagattt agcgaagttc
     5341 tctggtgtac cggtgtggaa tggattaaca gacgattggc atcctacaca aatgttagct
     5401 gattttatga caataaaaga gaattttgga tatctagaag gaataaactt aacttacgtt
     5461 ggagatggac gtaataatat tgcgcattca ttaatggtag caggtgctat gttaggtgtt
     5521 aatgtaagaa tttgtacacc taaatcatta aatccaaaag aggcatatgt tgatattgca
     5581 aaagaaaaag cgagtcaata tggtggttca gtcatgatta cggataatat tgcagaagca
     5641 gttgaaaata cagatgctat atatacagat gtttgggtat cgatgggtga agaaagtgaa
     5701 tttgaacaac gtattaattt attaaaagac tatcaagtga atcaacagat gtttgattta
     5761 acaggtaaag attcaacgat attcttacat tgtttaccag cattccatga tacaaataca
     5821 ctttatggac aagaaattta tgaaaaaaat ggattagctg aaatggaagt tacagaccaa
     5881 atctttagaa gtgaacattc aaaagtgttt gatcaagctg aaaatagaat gcatacaatt
     5941 aaggcagtaa tggcagcaac attggggagt taatcactaa atggaatgat atgaatatga
     6001 tgtgtctgat gatataagtg tcatgtacag acacctcata ttggtattaa aggagaaatg
     6061 aatatgaacg aatcaggaga taacaaactc agtaaatctt ctttaattgg actagttata
     6121 ggatccatga ttggtggcgg tgcgttcaat ataatgtctg atatgggcgg taaagccggt
     6181 ggattagcca ttattattgg ttggattatt acagctatag gaatgatttc attagcgttc
     6241 gtatttcaaa atttaaccaa tgaacggccg gagctagacg gtggtattta tagttatgct
     6301 caagcaggat ttggcgattt tgtaggcttt atcagtgctt ggggatattg gttctcagcg
     6361 tttttaggca atgttgccta tgcaacacta ttgatgtcag cagtaggtaa ctttttcccg
     6421 atttttaaag gaggcaacac attatcaagt attattgtcg catctatatt actttggggt
     6481 gtgcatttcc taattttaaa aggtgttgaa acagcagcct ttatcaatag tattgttact
     6541 gttgcaaagt taataccgat tttacttgta atcatatgca tgataattgc attcaatttt
     6601 gacactttta aaacaggctt tttcggtatg acgtcagagg gtgtattgcc atttagttgg
     6661 gcgagcacaa tgagccaagt taaaagtacg atgctagtga cagtttgggt gtttatcggt
     6721 atcgaaggtg cagtaatttt ttctagtaga gctaaaaata aaaaagatgt aggtagtgcc
     6781 acggttatag gacttatatc agttttaatt atctatttct tattaactgt attagctcaa
     6841 ggcgtgattt tgcaaaatca tatttctcaa ttagattcgc caagtatggc acaggtgctt
     6901 gcaactattg taggtggttg gggatctaca cttgtaaata ttggtttaat tatttcggta
     6961 ctaggtgcat ggttaggatg gacattgctt gctggtgaat tacctttcat tgttgcaaaa
     7021 gatggattat ttccaaaatg gtttgctaaa gaaaataaaa atggagcacc tgtaaatgca
     7081 ctgcttatta ccaatatatt agtacaatta tttttaataa gtatgctatt tacacagagt
     7141 gcgtatcaat ttgcattttc actagcatca agtgctattt tataccctta catgttcagt
     7201 gcattttacc aagttaaata cactttagag catcgacagc aagcaactac taaacaatgg
     7261 acgattggta tcatagcctc aatttatgct atatggctta tatatgcagc aggtatcaat
     7321 tacttattat tgacgatgtt actttatatt ccagctcttc ttgtttattc aatcgttcaa
     7381 aagaataatc agacacgttt gattaaatca gactatatcc tttttatgat tattatcgta
     7441 cttgcagtta tcgggttaat taagttattg atgggaacga taaatgtttt ttaaaaggag
     7501 cgacaaaaat atgaaagaga aaattgtcat tgcattaggc ggtaatgcga tacagacaaa
     7561 agaagcaaca gctgaagcac aacaaacagc tattagacgt gcgatgcaaa accttaaacc
     7621 tttatttgat tcaccagcgc gtattgtcat ttcacatggt aatggcccac aaattggaag
     7681 tttattaatc caacaagcta aatcgaacag tgacacaacg ccggcaatgc cattggatac
     7741 ttgtggtgca atgtcacagg gtatgatagg ctattggttg gaaactgaaa tcaatcgcat
     7801 tttaactgaa atgaatagtg atagaactgt aggcacaatc gttacacgtg tggaagtaga
     7861 taaagatgat ccacgattca ataacccaac caaaccaatt ggtccttttt atacgaaaga
     7921 agaagttgaa gaattacaaa aagaacagcc agactcagtc tttaaagaag atgcaggacg
     7981 tggttataga aaagttgttg cgtcaccact acctcaatct atactagaac accagttaat
     8041 tcgaacttta gcagacggta aaaatattgt cattgcatgc ggtggtggcg gtattccagt
     8101 tataaaaaaa gaaaatacct atgaaggtgt tgaagcggtt atagataaag attttgctag
     8161 tgagaaatta gcaacgctga ttgaagcaga taccttaatg attcttacga atgtagaaaa
     8221 tgtatttatt aactttaatg aacctaatca acaacaaatc gatgatattg atgtagcaac
     8281 actgaaaaaa tacgcggcac aaggtaagtt tgcggaagga tcgatgttgc caaaaataga
     8341 agctgcgata cgatttgttg aaagtgggga aaacaaaaaa gttatcatta ccaatttaga
     8401 gcaggcatac gaagctttga ttggtaataa aggtacacac attcacatgt agcactttat
     8461 cacgcgacaa aacattaaat atgtttctcc gttgattcaa atgaaaaagt tgtctgctga
     8521 cactttgcaa ggtttgaagg agtttaactt atgacagaaa actttatttt gggtagaaat
     8581 aataaattag aacatgaact aaaggcatta gcagattaca ttaatatccc atatagtata
     8641 ttacaaccat atcaaagtga atgttttgtc agacattata cgaaaggcca agttatttat
     8701 ttttcgccac aagaaagtag caatatttac tttttaattg aaggtaacat tattagagaa
     8761 cattacaatc aaaatggaga tgtatatcgt tattttaata aagagcaagt attatttcca
     8821 atcagtaact tatttcatcc gaaagaggtt aacgaattgt gtacagcact aaccgattgt
     8881 acagttcttg gattgcctag agaattgatg gcctttttgt gcaaagctaa tgatgatata
     8941 tttttgacac tttttgcatt aataaatgat aatgagcagc aacacatgaa ctataacatg
     9001 gcattaacaa gtaaatttgc taaagatcga attatcaaat tgttatgcca tctatgtcag
     9061 acagtaggat acgatcaaga tgaattttat gaaatcaaac agtttttaac tattcaactc
     9121 atgagtgata tggctgggat ttcccgggaa acagctggtc atattattca tgaacttaaa
     9181 gatgaaaaac ttgttgttaa agatcataaa aattggttag taagcaaaca tttattcaat
     9241 gatgtatgtg tttaatatac aatgtaaaat gaataagttg aacatgaggt ctaacgtaca
     9301 tttatacgtt aggccttttt tgctagcatg atgattaatt taatatgtta gttaaatttg
     9361 attgttgaaa ttacagtaaa atttaaggtg atgaaaaatt tagaacttct aagtttttga
     9421 aaagtaaaac atttgcaata gtgtaaaaat agtatattga tttttgctag ttaacagaaa
     9481 attttaagtt atataaatag gaagaaaaca aattttacgt aatttttttc gaaaagcaat
     9541 tgatataatt cttatttcat tatacaattt agactaatct agaaattgaa atggagtaat
     9601 atttttgaaa aaaagaattg attatttgtc gaataagcag aataagtatt cgattagacg
     9661 ttttacagta ggtaccacat cagtaatagt aggggcaact atactatttg ggataggcaa
     9721 tcatcaagca caagcttcag aacaatcgaa cgatacaacg caatcttcga aaaataatgc
     9781 aagtgcagat tccgaaaaaa acaatatgat agaaacacct caattaaata caacggctaa
     9841 tgatacatct gatattagtg caaacacaaa cagtgcgaat gtagatagca cagcaaaacc
     9901 aatgtctaca caaacgagca ataccactac aacagagcca gcttcaacaa atgaaacacc
     9961 tcaaccgacg gcaattaaag atcaagcaac tgctgcaaaa atgcaagatc aaactgttcc
    10021 tcaagaagca aattctcaag tagataataa aacaacgaat gatgctaata acatagcaac
    10081 aaacagtgag cttaaaaatc ctcaaacatt agatttacca caatcatcac cacaaacgat
    10141 ttccaatgcg caaggaacta gtaaaccaag tgttagaacg agagctgtac gtagtcttgc
    10201 agttgctgaa cctgtagtaa atgctgctga tgctaaaggt acaaatgtaa atgataaagt
    10261 tacggcaagt gatttcaagt tagaaaagac tacattcgac cctaaccaaa gtggtaacac
    10321 atttatggcg gcaaatttta cagtgacaga taaagtgaaa tcaggggatt attttacagc
    10381 gaagttacca gatagtttaa ctggtaatgg agacgtggat tactctaatt caaataatac
    10441 gatgccaatt gcagacatta aaagtacgaa tggtgatgtt gtagcgacag cgacttataa
    10501 tatcttgact aagacgtata catttgtctt tacagattat gtaaatgata aagaaaatat
    10561 taacggacaa ttttcattac ctttatttac agaccgagca aaggcaccta aatcaggaac
    10621 atatgatgca aatattaata ttgcggatga aatgtttaat aataaaatta cttataacta
    10681 tagttcgcca attgcaggaa ttgataagcc aaatggcgcg aacatttctt ctcaaattat
    10741 tggtgtagat acagcttcag gccaaaacac atacaagcaa acggtatttg ttaaccctaa
    10801 gcaacgagtt ttaggtaata cgtgggtgta tattaaaggc taccaagata aaatcgaaga
    10861 aagtagcggt aaagtaagtg ctacagatac aaaactgaga atttttgaag tgaatgatac
    10921 atctaaatta tcagatagct actatgcgga cccaaatgac tctaatctta aagaagtaac
    10981 gaatgagttt aaggataaaa tcacttataa ataccaaaat gtagcaagta ttaattttgg
    11041 cgatattact aaaacgtatg ttgtattagt ggaaggtcac tatgataata ctggtaaaaa
    11101 cttgaaaaca caggttattc aagaaaatat tgacccagcg acaggtaaag attacagtat
    11161 tttcggttgg aataatgaga atgttgtacg ttatggaggc ggaagtgctg atggtgattc
    11221 agcagtaaat ccagttgatc caacaccggg accaccagtt gacccagagc caagtccaga
    11281 gccagaaccg gaaccaacgc cggatccaga gccaagtcca gacccagagc cggaaccaac
    11341 accggaccca gaaccaagtc cagacccaga gccggaacca acaccggatc cagagccaag
    11401 tccagacccg gattcggatt cggacagtga ctcagattcg gatagcaact cggacttaga
    11461 cagtgactcg ggctcagaca gtgattcaga ctcagatagc gattcagatt cagatagcga
    11521 ctcagactta ga
//
LOCUS       DAKPJH010000081        11430 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.081, whole genome shotgun sequence.
ACCESSION   DAKPJH010000081 DAKPJH010000000
VERSION     DAKPJH010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11430
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.081"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            76..381
                     /locus_tag="OY092_001895"
     CDS             76..381
                     /locus_tag="OY092_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P27 family phage terminase small subunit"
                     /protein_id="HCX1076835.1"
                     /translation="MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSD
                     LMIEHTNKAGASNIIKNPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY"
     gene            371..2062
                     /locus_tag="OY092_001896"
     CDS             371..2062
                     /locus_tag="OY092_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HCX1076836.1"
                     /translation="MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYL
                     ENGGKWVFDEELAHRPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLR
                     RFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMI
                     KASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLI
                     SVIKNSRAARLQPLLIYITTAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDD
                     DDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMS
                     FIDYPTLQKNNEIVSLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLSHSWI
                     PKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVLNWIIKMNEHYVVEKITYDRAN
                     AFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGKIIFNNNPLMKWYINNVQL
                     KLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDKGEGNIEFISIKDIMR"
     gene            2067..3305
                     /locus_tag="OY092_001897"
     CDS             2067..3305
                     /locus_tag="OY092_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCX1076837.1"
                     /translation="MNVIAKENIVTRIKKKLIDNWIDQSASKLYDFSPWKNKSFWGVI
                     NNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFIN
                     QIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKL
                     IVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGS
                     NVGKEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVAN
                     VFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRY
                     FKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPI
                     DTPLELRKSLKGGDKNVNES"
     gene            3289..4062
                     /locus_tag="OY092_001898"
     CDS             3289..4062
                     /locus_tag="OY092_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HCX1076838.1"
                     /translation="MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNK
                     LDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGD
                     TIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQ
                     MLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKID
                     DVDTSELVETPKESMSLEEKEKREKIKRECEILKMTMNY"
     gene            4074..5237
                     /locus_tag="OY092_001899"
     CDS             4074..5237
                     /locus_tag="OY092_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HCX1076839.1"
                     /translation="MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLET
                     EKAGLQQRFNIVERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPN
                     EFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGL
                     EIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVN
                     WVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHE
                     DYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNY
                     FGINYDGTTYDTDKDVRKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGPLPS"
     gene            5306..5584
                     /locus_tag="OY092_001900"
     CDS             5306..5584
                     /locus_tag="OY092_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HCX1076840.1"
                     /translation="MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDD
                     LEYPLFCTAIKYIIARDYESRGYSNDQSRSKVFNEKGLQKMILKLKKW"
     gene            5596..5928
                     /locus_tag="OY092_001901"
     CDS             5596..5928
                     /locus_tag="OY092_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076841.1"
                     /translation="MEFNEFKDRAYFFQYINKGPYPDEEEKMKLYSCFCKIYNPSMKD
                     REILKATESKSGLTIIVRSSKTEYLPQTNHLVKIDSALYSDKLFNIVEIRIDTPDIGY
                     NTVVLSEK"
     gene            5925..6326
                     /locus_tag="OY092_001902"
     CDS             5925..6326
                     /locus_tag="OY092_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076842.1"
                     /translation="MSVEIKGIPEVLNKLESVYGKQAMQAKSDKALNEASEFFIKALK
                     KEFESFKDTGASIEEMTKSKPYTKVGSQERAVLIEWVGPMNRKNIIHLNEHGYTRDGK
                     KYTPRGFGVIAKTLAASERKYREIIKKELAR"
     gene            6327..6722
                     /locus_tag="OY092_001903"
     CDS             6327..6722
                     /locus_tag="OY092_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HCX1076843.1"
                     /translation="MNILNTIKGILLSDAELKTHINSRIYYYKVTENAETSKPFVVIT
                     PVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKTIDITKRIRYLLYQQNLIQASSQLDA
                     YFEETKRYVMSRRYQGIPKNIYYKNQRIE"
     gene            6757..7398
                     /locus_tag="OY092_001904"
     CDS             6757..7398
                     /locus_tag="OY092_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCX1076844.1"
                     /translation="MAEGQGSYKVGFKRLYVGVFNPEATKVVKRMTWEDEKGGTVDLN
                     ITGLAPDLVDMFASNKRVWMKKQGTNEVKSDMSIFNIPSDDLNTVIGRTKDKNGTSWV
                     GENTRAPYVTVIGESEDGLTGQPVYVALLKGTFSLDSIEFKTRGEKAEAPEPTKLTGD
                     WMNRKVDVDGTSQGIVYGYHEGKEGEAEFFKKVFVGYTDSEDHSEDSAGSLPS"
     gene            7490..7945
                     /locus_tag="OY092_001905"
     CDS             7490..7945
                     /locus_tag="OY092_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig domain-containing protein"
                     /protein_id="HCX1076845.1"
                     /translation="MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVA
                     WEENGKESSKVDVPQFKTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKILK
                     YTSEHPEFVTVDENTGAIHGVAEGTSVITAMSTDGSDKSGQISVTVTNG"
     gene            8003..8353
                     /locus_tag="OY092_001906"
     CDS             8003..8353
                     /locus_tag="OY092_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076846.1"
                     /translation="MIKFEIKDRKTGKTESYTKEDVTMGEAEKCYEYLELVNQENKKE
                     APNATKMRQKERQLLVDLFKDEGLTEEDVLNKMSTKTYTKALQDIFREINGEDEEDSE
                     TEPEEMGKTEEQSQ"
     gene            8395..8553
                     /locus_tag="OY092_001907"
     CDS             8395..8553
                     /locus_tag="OY092_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076847.1"
                     /translation="MEQYGWTLTEVRKQPYVKLLEILNEENKEETEEKQSEQKVITGT
                     DLRKLFGS"
     gene            8567..>11430
                     /locus_tag="OY092_001908"
     CDS             8567..>11430
                     /locus_tag="OY092_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCX1076848.1"
                     /translation="MNEKVEGMTLELKLDHLGVQEGMKGLKRQLGVVNSEMKANLSAF
                     DKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELKQVNANYQKAKSSVKDVEKAYLK
                     LVEANKKEKLALDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQKLKQLRDAEQKLK
                     NSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESS
                     YAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAALNNLERSIDKASSEMK
                     TFNKEQMIAQSHFGKLASQADVMSKKFSSIGDKMTSLGRTMTMGVSTPITLGLGAALK
                     TSADFEGQMSRVGAIAQASSKDLKSMSNQAVDLGAKTSKSANEVAKGMEELAALGFNA
                     KQTMEAMPGVISAAEASGAEMATTATVMASAINSFGLKASDANHVADLLARSANDSAA
                     DIQYMGDALKYAGTPAKALGVSIEDTSAAIEVLSNSGLEGSQAGTALRASFIRLANPS
                     KNTAKEMKKLGIHLSDAKGQFVGMGELIRQFQDNMKGMTREQKLATVATIVGTEAASG
                     FLALIEAGPDKINSYSKSLKNSNGESKKAADLMKDNLKGALEQLGGAFESLAIEVGKD
                     LTPMIRAGAEGLTKLVDGFTHLPGWVRKASVGLALFGAAIGPAVLAGGLLIRTVGSAA
                     KGYASLNRRIAENTILSNTNSKAMKSLGLQTLFLGSTTGKTSKGFKGLAGAMMFNLKP
                     INVLKNSAKLAILPFKLLKNGLGLAAKSLFAVSGGARFAGVALRFLTGPIGATITAIT
                     IAYKVFKTAYDRVEWFRNGINGLGETIKFFGGKIIGGAVRKLGEFKNYLGSIGKSFKE
                     KFSKDMKDGYKSLSDDDLLKVGVNKFKGFMQTMGTASKKASDTVKVLGKGVSKETEKA
                     LEKYVHYSEENSRIMEKVRLNSGQISEDKAKKLLKIETDLS"
BASE COUNT         4468 a         1576 c         2260 g         3126 t
ORIGIN      
        1 tgttttttcg ccgggtaccg gagaggccca aacgctagca acgcggataa atttttcatg
       61 aaagggggtc tttatatgaa gttaacaaaa aaacagctaa aagaatatat agaagattac
      121 aaaaaatctg atgacatatt aattaatttg tatatagaaa catatgaatt ttattgtcgg
      181 ttaagagatg aacttaaaaa tagtgattta atgatagagc atacaaacaa ggctggtgcg
      241 agcaatatta ttaagaatcc attaagcata gaactgacaa aaacagttca aacactaaat
      301 aacttactca agtctatggg tttaactgca gcacaaagaa aaaagatagt tcaagaagaa
      361 ggtggattcg gtgactatta aagttttaaa tgaaccttca ccaaaactat taacaacatg
      421 gtatgcagag caagtcactc aagggaaaat aaaaacaagc aaatatgtta gaaaagaatg
      481 tgagagacat cttagatatc tagaaaatgg aggtaaatgg gtatttgatg aagaattagc
      541 gcatcgtcct attcgattca tagaaaagtt ttgtaaacct tccaaaggat ctaaacgtca
      601 acttgtatta caaccatggc aacattttat tattggcagt ttgtttggtt gggttcataa
      661 agaaacaaaa ctgcgcaggt ttaaagaagc tttgatattt atggggcgaa aaaatggtaa
      721 aacaactact atatctggtg ttgctaacta tgctgtttct caagatggag aaaacggcgc
      781 tgaaatccat cttttagcaa acgtaatgaa acaagctaga atattattcg atgaatctaa
      841 ggcgatgata aaagctagcc caaagcttga taaaaatttc agaacattaa gagatgaaat
      901 ccattatgac gcaacgatat caaaaattat gccccaagca tcagatagcg ataagttaga
      961 tggattgaat acacacatgg ggatttttga tgaaattcat gaatttaaag actataaatt
     1021 gatttcagtt ataaaaaact caagagctgc aaggttacaa cctcttctca tctacattac
     1081 gacagcaggg tatcaattag atggtccgct tgttgatatg gtagaagcgg gaagagacac
     1141 cttagatcaa atcatagaag acgaaagaac tttttattat ttagcatctt tggatgatga
     1201 cgatgatatt aatgattcgt cgaactggat aaaagcaaat cccaacttag gtgtctctat
     1261 aaatttagat gagatgaaag aagagtggga aaaagctaag agaacaccag ctgaacgtgg
     1321 agattttata accaaaaggt ttaatatctt tgctaataat gacgagatga gttttattga
     1381 ttacccaaca ctccaaaaaa ataatgaaat tgtttcttta gaagagctgg aaggcagacc
     1441 atgcacgatt ggttatgatt tatcagaaac agaggacttt acagccgcgt gtgctacttt
     1501 tgcgttagat aatggtaaag ttgcagtttt atcgcattca tggattccta agcacaaagt
     1561 tgaatattct aacgaaaaaa taccctatag agaatgggaa gaagatggct tattaacagt
     1621 gcaagataag ccttatattg actaccaaga tgttttaaat tggataatta agatgaatga
     1681 gcattatgta gtagaaaaaa ttacttatga tagagcgaac gcattcaaac taaatcaaga
     1741 gttaaaaaat tacgggtttg aaacggaaga aacaagacaa ggagctttga ccttgagccc
     1801 tgcattgaag gatttaaaag aaatgttttt agatgggaaa ataatattta ataataatcc
     1861 tttaatgaaa tggtatatca ataatgttca gttgaaacta gacagaaacg gaaactggtt
     1921 gccgtctaag caaagcagat atcgtaaaat agatggcttt gcagcatttt taaacacata
     1981 tacagatatt atgaataaag ttgtttctga caagggtgaa ggaaacatag aatttattag
     2041 tattaaagat ataatgcgtt aaggaggtga atgttatcgc aaaagagaat attgtcacac
     2101 gcataaagaa aaaattgata gacaattgga ttgatcagtc agcttctaag ctttatgact
     2161 ttagcccatg gaaaaataaa tctttttggg gtgtaatcaa taatacgctt gaaactaatg
     2221 aaacgatatt ttcagctatt acaaagttat ctaattcgat ggctagtttg cccttgaaaa
     2281 tgtatgaaga ttataaagta gttaatacag aagtatctga tttacttaca gtgtcaccga
     2341 ataattctct gagcagtttt gattttatta atcaaattga aacaatcaga aatgaaaaag
     2401 gtaatgcata tgtgctaatt gaacgagaca tctatcatca accatcaaag cttttcttat
     2461 taaatccaga tgttgttgaa atgttaattg aaaaccaatc acgtgaactt tattattcca
     2521 ttcatgctgc aactggaaat aaattgattg ttcataatat ggacatgttg cattttaaac
     2581 acatcgtggc atctaatatg gtgcaaggca ttagtccgat tgatgtgttg aagaatacaa
     2641 ctgattttga taatgcagta agaaccttta atcttacaga aatgcaaaaa cctgattctt
     2701 tcatgcttaa atatggttcc aatgtaggta aagaaaaaag gcagcaagtg ttagaagatt
     2761 tcaaacagta ctatgaagaa aacggtggaa tattattcca agagcctggt gttgaaatcg
     2821 aaccgttacc taaaaaatat gtctctgaag atatagtggc aagcgagaat ttaacaagag
     2881 aaagagtagc taacgttttt caattgccct cagtattctt aaatgcaaga tcaaatacaa
     2941 atttcgcgaa aaatgaagag ttaaacagat tttacttgca gcatacctta ttgccaatcg
     3001 tcaaacagta tgaagaagaa tttaatcgga aactacttac taaaacagac agagaaaaaa
     3061 ataggtattt taaatttaac gttaaatctt atttaagggc tgatagtgca acacaagcag
     3121 aagtgtactt taaagcagtt cgtagtggtt actacactat aaatgacatt agagagtggg
     3181 aagatttacc accagttgaa ggtggagata agccgctaat aagcggtgat ttatacccaa
     3241 ttgacacgcc acttgaatta agaaaatctt tgaaaggtgg tgataaaaat gtcaatgaaa
     3301 gctaagtatt ttcaaatgaa aagaaaatca aaaagtaaag gtgaaatatt tatttatggt
     3361 gatattgtaa gtgataaatg gtttgaaagt gatgtaactg ctacagattt caaaaataaa
     3421 ctagatgaac taggagacat cagtgaaata gatgttcata taaattcatc tggaggcagt
     3481 gtatttgaag ggcatgcaat atacaatatg ctaaaaatgc atcctgcaaa aattaatatc
     3541 tatgtcgatg ccttagcggc atcaattgct agtgttatcg ctatgagtgg tgacactatt
     3601 tttatgcaca aaaatagttt tttaatgatt cataattcat gggttatgac tgtaggtaat
     3661 gcagaagaat taagaaagac agcggattta cttgaaaaaa cagatgctgt tagtaattca
     3721 gcttatttag ataaagcaaa agatttagat caagaacact taaaacagat gttagatgca
     3781 gaaacttggc ttactgcaga agaagccttg tctttcggct tgatagatga aattttagga
     3841 gctaatgaaa tagctgctag tatctctaaa gagcaatata agcgtttcga gaacgtccca
     3901 gaagatttaa agaaagatgt agacaaaatc actaaaattg atgatgtaga tacatctgaa
     3961 ttggttgaaa cacctaaaga aagtatgtca ctagaagaaa aagaaaaaag agaaaaaatt
     4021 aaacgcgaat gcgaaatttt aaaaatgaca atgaattatt aggaggaaat gaaatgccga
     4081 cattatatga attaaaacaa tccttaggta tgattggaca acaattaaaa aataaaaatg
     4141 atgaattgag tcagaaagca acagatccaa atattgatat ggaagacatc aaacaactag
     4201 aaacagaaaa agcaggttta caacaaagat ttaacattgt tgaaagacaa gtgcaagaca
     4261 ttgaagagaa agaaaaagcg aaagttaaag ataaaggaga agcttatcaa tctttaagtg
     4321 ataatgagaa gatggttaaa gctaaggcag agttttatcg tcacgcgatt ttaccaaatg
     4381 aatttgaaaa accttcaatg gaggcacaac gtttattaca cgctttacca acaggaaatg
     4441 attcaggtgg agataagctc ttaccaaaaa cactttctaa agaaattgtt tcagaaccat
     4501 ttgctaaaaa ccaattacgt gaaaaagctc gtctaactaa cattaaaggt ttagagattc
     4561 caagagtttc atacacttta gacgatgatg atttcattac agacgtagaa acagcaaaag
     4621 aattaaaagc aaaaggtgat acagtcaagt tcactactaa taaattcaaa gtatttgctg
     4681 caatttcaga tactgtaatt catggatcag atgtagattt agtaaactgg gttgaaaacg
     4741 cactacaatc aggattagca gctaaagagc gtaaagatgc cttagcagta agtcctaaat
     4801 ctggattaga acacatgtca ttttataatg gatctgttaa agaagttgag ggagcagaca
     4861 tgtatgatgc tattattaac gctttagcag atttacatga agattatcgt gataacgcaa
     4921 caatttatat gcgatatgca gattatgtca aaattattag tgttctttca aatggaacaa
     4981 caaatttctt tgacacacca gcagaaaaag tatttggcaa accagtagta tttacagatg
     5041 cagcagttaa acctattgtg ggagatttca attattttgg aattaactat gatggaacaa
     5101 cttatgacac tgataaagat gttagaaaag gcgaatattt gtttgtatta acagcatggt
     5161 atgatcagca acgtacatta gacagtgcat tcagaattgc aaaagcaaaa gaaaatacag
     5221 gtccattacc cagctaagcc ccaaaaggtt aatgtaacag ctaaggctaa atcagctgta
     5281 atatcagccg aataggggtg atgaaatgag tttagaagaa attaaattgt ggttgagaat
     5341 tgactataat ttcgaaaatg atttaattga aggtctcatt caatcggcta agtctgaatt
     5401 actattaagt ggggttccag attatgacaa agatgacttg gaatacccgc ttttttgtac
     5461 agcgattaaa tatatcattg caagagatta tgaaagtcgt ggatactcaa atgaccaatc
     5521 tagaagcaag gtgtttaatg aaaaaggatt gcaaaaaatg attttgaaat taaaaaagtg
     5581 gtaggtgatt tttaaatgga atttaatgaa tttaaagatc gcgcgtattt ttttcaatat
     5641 ataaacaaag gaccatatcc agatgaagag gaaaaaatga aattgtatag ttgcttttgt
     5701 aaaatttata atccttctat gaaagataga gaaattttaa aagcgactga atcaaaatca
     5761 ggattaacca taattgtcag gtcttctaaa actgaatatc taccacaaac aaatcactta
     5821 gttaaaattg acagtgcatt atattccgat aaattattca acattgtaga aataagaatt
     5881 gatacaccag atattggcta taatacagtg gttttatcag aaaaatgagt gtagaaatta
     5941 aagggatacc tgaagtgttg aataaattag aatcggtata cggtaaacaa gcaatgcagg
     6001 ctaagagtga taaagcttta aatgaagcat ctgaattttt tataaaggct ttaaagaaag
     6061 agttcgagag ctttaaagat acgggtgcca gtatagaaga aatgactaaa tctaagcctt
     6121 atacaaaagt tggcagtcaa gaaagggctg ttttaattga atgggtaggc cctatgaatc
     6181 gcaaaaacat tattcacttg aatgaacatg gttatacaag agatggaaaa aaatatacac
     6241 caagaggttt tggagttatt gcaaaaacat tagctgctag cgaacgtaag tatagagaaa
     6301 ttataaaaaa ggagttggcc agataaatga atatattaaa caccataaaa ggaattttat
     6361 tatctgatgc agagctcaaa acacatataa attctagaat atactattac aaagtcactg
     6421 aaaacgctga aacttccaaa ccctttgttg ttattacacc tgtttatgat ttgccttcag
     6481 actttatgtc tgataaatat ctcagtgaag aatacttaat tcaaatagat gtagaatctt
     6541 caaataatca gaaaacaatt gatataacaa aacgaataag atacctgtta tatcaacaaa
     6601 atttaattca agcatctagt cagttagatg cttattttga agaaactaaa cgttatgtga
     6661 tgtcgagacg atatcaaggc atacccaaaa atatatatta taaaaatcag cgcatcgaat
     6721 aggtgtgctt tttaattttt aaggaggaaa taagcaatgg cagaaggaca aggttcttat
     6781 aaagtaggtt ttaaaagatt atacgttgga gtttttaacc cagaagcaac aaaagtagtt
     6841 aaacgcatga catgggaaga tgaaaaaggt ggtacagttg acctaaatat cacaggttta
     6901 gcaccagatt tagtagatat gtttgcatct aacaaacgtg tatggatgaa aaaacaaggt
     6961 actaatgaag ttaagtctga catgagtatt ttcaatattc caagtgatga tttaaacaca
     7021 gttattggac gtactaaaga taaaaatggt acatcttggg taggagagaa tacaagagca
     7081 ccgtatgtaa cagtaattgg cgaatcggaa gatggtttaa caggtcagcc ggtatatgta
     7141 gccttactta aaggtacttt tagtttagat tcaattgaat ttaaaacacg aggtgaaaaa
     7201 gcagaagccc cagaacctac aaaattaaca ggtgactgga tgaatagaaa agttgatgtt
     7261 gatggaacgt cacaaggtat tgtatacggt tatcatgaag gtaaagaagg agaagcagaa
     7321 ttcttcaaaa aagtattcgt tggatacacg gacagtgaag atcattcaga ggattctgca
     7381 ggttcgttac ccagctaatc cccaaaatgt tgaagtagca gttaattcaa aatctgcaac
     7441 agtttcagca gaataggggc tttcaaaata aatcaaagga gaataattta tgactaaaac
     7501 tttaaaggtt tataaaggag acgacgtcgt agcttctgaa caaggtgaag gcaaagtgtc
     7561 agtaacttta tctaatttag aagcggatac aacttatcca aaaggtactt accaagtggc
     7621 atgggaagaa aatggtaaag aatctagtaa agttgatgta cctcaattca aaaccaatcc
     7681 aattctagtc tcaggcgtat catttacacc agaaactaaa tcaattatgg taaataccga
     7741 tgacaatgtt gagccaaaca ttgcaccaag cacagcaacg aataaaatat tgaaatatac
     7801 aagtgaacat ccagaatttg ttactgtaga tgaaaataca ggagcaattc acggtgtagc
     7861 tgaaggtact tcagtaatca ctgctatgtc tactgatgga agcgataagt caggacaaat
     7921 ttcagtgaca gtaacaaacg gatagggatt taaggcgcag tatatctgcg tcttttttat
     7981 ttgaataaaa ggagctaata caatgattaa atttgaaatt aaagatcgta aaacaggaaa
     8041 aacagagagc tatacaaaag aagatgtaac aatgggcgaa gcagaaaaat gctatgagta
     8101 tttagaatta gtaaatcaag agaataaaaa agaagcacct aacgcaacaa aaatgagaca
     8161 aaaagagcga cagttattag tagatttatt taaagatgaa ggattgactg aagaagatgt
     8221 tctgaacaag atgagtacta aaacttatac aaaagcctta caagatatat ttcgagaaat
     8281 caatggtgaa gatgaagaag attcagaaac tgaaccagaa gagatgggaa agacagaaga
     8341 acaatctcaa taaaagacat tttatcgaac attaagaaaa tacaacgttt ctgtatggag
     8401 cagtatgggt ggacattaac tgaagtcaga aaacagccgt atgtaaaact tttagaaata
     8461 cttaatgaag agaataaaga agagactgaa gaaaaacaaa gtgaacaaaa agtcattaca
     8521 ggtacggatt taagaaaact ttttggaagc tagaaaggag gttaatatga atgaaaaagt
     8581 agaaggcatg accttggagc tgaaattaga ccatttaggt gtccaagaag gcatgaaagg
     8641 tttaaagcga caattaggtg ttgttaatag tgaaatgaaa gctaatctgt cagcatttga
     8701 taagtctgaa aaatcaatgg aaaaatatca ggcgagaatt aaggggttaa atgataggct
     8761 taaagttcaa aaaaagatgt attctcaagt agaagatgag cttaaacaag ttaacgctaa
     8821 ttaccaaaaa gctaaatcca gtgtaaaaga tgttgagaaa gcatatttaa agttagtaga
     8881 agccaataaa aaagaaaaat tagctcttga taaatctaaa gaagccttaa aatcatcgaa
     8941 tacagaactt aaaaaagctg aaaatcaata taaacgtaca aatcaacgta aacaagatgc
     9001 gtatcaaaaa cttaaacagt tgagagatgc agaacaaaag cttaagaata gtaaccaagc
     9061 tactactgca caactaaaaa gagcaagtga cgcagtacag aagcagtccg ctaagcataa
     9121 agcacttgtt gaacaatata aacaagaagg caatcaagtt caaaaactaa aagtgcaaaa
     9181 tgacaatctt tcaaaatcaa atgataaaat tgaaagttct tacgctaaaa ctaatactaa
     9241 attaaagcaa acagaaaaag aatttaatga tttaaacaat actattaaga atcatagcgc
     9301 taatgtcgca aaagctgaaa cagctgttaa taaagaaaaa gctgctttaa ataatttgga
     9361 gcgttcaata gataaagctt catccgaaat gaagactttt aacaaagaac aaatgatagc
     9421 tcaaagtcat ttcggtaaac ttgcaagtca agcggatgtc atgtcaaaga aatttagttc
     9481 tattggagac aaaatgactt ccctgggacg tacaatgacg atgggcgtat ctacaccaat
     9541 tactttaggg ttaggtgcag cattaaaaac aagtgcagac tttgaaggcc aaatgtctcg
     9601 agttggagcg attgcgcaag caagcagtaa agacttgaaa agcatgtcta atcaagcagt
     9661 tgacttagga gctaaaacca gtaaaagtgc taacgaagtt gctaaaggta tggaagaatt
     9721 ggcagcttta ggctttaatg ccaaacaaac aatggaggct atgccaggtg ttatcagtgc
     9781 agcagaagca agtggtgcag aaatggctac aactgcaact gtaatggctt cagcgattaa
     9841 ctctttcggt ttaaaagcat ctgatgcaaa tcatgttgct gatttacttg cgagatcagc
     9901 aaatgatagt gctgcagata ttcagtacat gggagatgca ttgaagtatg ctggtactcc
     9961 tgcaaaagca ttaggagttt caatagagga cacttccgca gcaattgaag ttttatctaa
    10021 ctcaggttta gagggttctc aagcaggtac tgccctaaga gcttcattta tcaggctagc
    10081 taatccaagt aaaaatacag ctaaggaaat gaaaaaatta ggtattcatt tgtctgatgc
    10141 taaaggtcaa tttgttggca tgggtgaatt gattagacag ttccaagata atatgaaagg
    10201 catgacgaga gaacaaaaac tagctacagt ggctacaata gttggtactg aagcagcaag
    10261 tggattttta gccttgattg aagcgggacc agataaaatt aatagctata gtaaatcctt
    10321 aaagaattcc aatggcgaaa gtaaaaaagc agcagatttg atgaaagata atctcaaagg
    10381 cgctctggaa caattaggtg gcgcttttga atcattagca atcgaagtcg gtaaagattt
    10441 aacgcctatg attagagcag gagcggaagg tttaacaaaa ttagttgatg gatttacaca
    10501 tctccctggt tgggttagaa aagcttcagt aggattagca ctttttggtg cagcaattgg
    10561 acctgcagtt cttgctggag ggttattaat acgtacagtt ggaagtgctg ctaaaggata
    10621 tgcgtcatta aatagacgta ttgctgaaaa tacaatcctt tcaaatacta attcaaaagc
    10681 aatgaaatct ttaggtcttc aaacattatt tcttggttct acaacaggaa aaacgtcaaa
    10741 aggctttaaa gggttagccg gagctatgat gtttaattta aaacctataa atgttttgaa
    10801 aaattctgca aagctagcaa ttttaccgtt caaacttttg aaaaacggtt taggattagc
    10861 tgcaaaatct ttatttgcag taagtggagg cgcaagattt gcgggtgtag ccttaaggtt
    10921 tttaacagga cctataggtg ctacaataac tgctattaca attgcgtata aagtttttaa
    10981 aaccgcatat gatcgtgtgg aatggttcag aaacggtatt aacggtttag gagaaactat
    11041 aaagtttttt ggtggtaaaa ttattggcgg cgctgttaga aagctaggag agtttaaaaa
    11101 ctatcttgga agtatcggca aaagcttcaa agaaaagttt tcaaaagata tgaaagatgg
    11161 ttataaatca ttaagcgacg atgaccttct caaagtagga gtcaacaagt ttaaaggatt
    11221 tatgcaaacc atgggcacag cttctaaaaa agcgtctgat actgtaaaag tgttagggaa
    11281 aggtgtttca aaagaaacag aaaaagcttt agaaaaatat gtgcattatt ctgaagaaaa
    11341 tagcagaatc atggaaaaag tacgtttaaa ctcgggtcag atatcagaag acaaagcaaa
    11401 aaaacttttg aaaattgaaa cggatttatc
//
LOCUS       DAKPJH010000082        11259 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.082, whole genome shotgun sequence.
ACCESSION   DAKPJH010000082 DAKPJH010000000
VERSION     DAKPJH010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11259
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.082"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..749
                     /locus_tag="OY092_001909"
     CDS             <1..749
                     /locus_tag="OY092_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HCX1076849.1"
                     /translation="EFEVKYLTGFILILLLEGIFTNSASAIEYSDLHHKSELDSKRLY
                     NAKVSFANPTQLENKKTNDRLLKHDLLFHDMFVNDAWKKDFKVEFENEALSKKFVNKD
                     IDIFAGNYGYGCHGGETNKTLCSYGGVTLSDNNKYDDYKNIPCNLWIDGHQTGIELTA
                     VKTKKKIVTIQELDVQLRNYLNEKYKLYELGGDIVKGYVKYHNDDEKNVEYDFYNLNG
                     EYGHEVLKMYADNKTINSDKLHLDIYLFKS"
     gene            complement(951..1220)
                     /locus_tag="OY092_001910"
     CDS             complement(951..1220)
                     /locus_tag="OY092_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076850.1"
                     /translation="MAENNQNSLVTKIATYGSFIAIASFVILFISIFLKFSFNIEFTA
                     TIMNICRYTLILGFILMSLPDVVDKNIKKIIFDAFIIIVFIFFLL"
     gene            1534..2220
                     /gene="mtnN"
                     /locus_tag="OY092_001911"
     CDS             1534..2220
                     /gene="mtnN"
                     /locus_tag="OY092_001911"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HCX1076851.1"
                     /translation="MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVI
                     TQSGIGKVNAAISTTLLINKFKPDIIINTGSAGALDESLNVGDVLISDDVKYHDADAT
                     AFGYEYGQVPQMPVAFQSSKPLIDKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKI
                     KKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSS
                     QTVEALVSQL"
     gene            2240..2767
                     /locus_tag="OY092_001912"
     CDS             2240..2767
                     /locus_tag="OY092_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HCX1076852.1"
                     /translation="MGLVRKFFMPNSYVQSIFQIDLDKLVDKGVKGIITDLDNTLVGW
                     DVKEPTERVKAWFKEANEKGITITIVSNNNESRVASFSQHLDIDFIFKARKPMGKAFD
                     KAITKMNIRPDQTVVIGDQMLTDVFGGNRRGLYTIMVVPVKRTDGFITKFNRLIERRL
                     LRHFSKKGYITWEEN"
     gene            2768..3868
                     /gene="yqeH"
                     /locus_tag="OY092_001913"
     CDS             2768..3868
                     /gene="yqeH"
                     /locus_tag="OY092_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HCX1076853.1"
                     /translation="MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLK
                     NYNEVQDVGLESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA
                     ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIREN
                     EDVYIVGTTNVGKSTLINKLIEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTP
                     GIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLV
                     CFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVM
                     ISGLGFITIGPGAKVIVRVPKNVDVVLRNSIL"
     gene            3882..4688
                     /gene="aroE"
                     /locus_tag="OY092_001914"
     CDS             3882..4688
                     /gene="aroE"
                     /locus_tag="OY092_001914"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HCX1076854.1"
                     /translation="MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHL
                     IKEIISKKELDGFNITIPHKERIIPYLDHVDEQAINAGAVNTVLIKDGKWIGYNTDGI
                     GYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLN
                     INQISIADAEKYLAEFDIVINTTPAGMAGNNEGIINLKHLSPNTLMSDIVYIPYKTPI
                     LEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE"
     gene            4692..4982
                     /gene="yhbY"
                     /locus_tag="OY092_001915"
     CDS             4692..4982
                     /gene="yhbY"
                     /locus_tag="OY092_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HCX1076855.1"
                     /translation="MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRE
                     LIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP"
     gene            4985..5554
                     /gene="nadD"
                     /locus_tag="OY092_001916"
     CDS             4985..5554
                     /gene="nadD"
                     /locus_tag="OY092_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HCX1076856.1"
                     /translation="MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL
                     KKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELY
                     FVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIR
                     QRVSEGKSIQVLVPKSVENYIKGEGLYEH"
     gene            5544..6128
                     /gene="yqeK"
                     /locus_tag="OY092_001917"
     CDS             5544..6128
                     /gene="yqeK"
                     /locus_tag="OY092_001917"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HCX1076857.1"
                     /translation="MNIEKAKRLAKEKLPEKRYNHSLRVAETAIKLAEIYDGDTSKVE
                     LAGVLHDFCKYDDLGKMYQIVRQYELGNDLLSYGSEILHGPVCAAIMEHEYGINDEEV
                     LMAIKYHTTGRQQMTKTEKLIFIADYIEPGRTIPGVDDIRDMAYNQGSLDKTIYEISK
                     RTVLFLIQKDITVYNKTIDCLNYYNYSDERIKDD"
     gene            6129..6482
                     /gene="rsfS"
                     /locus_tag="OY092_001918"
     CDS             6129..6482
                     /gene="rsfS"
                     /locus_tag="OY092_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HCX1076858.1"
                     /translation="MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNN
                     ERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEK
                     LYQDAPLESYSQVAY"
     gene            6485..7201
                     /locus_tag="OY092_001919"
     CDS             6485..7201
                     /locus_tag="OY092_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCX1076859.1"
                     /translation="MSQYAEMSLVYDQLTQDQPYEKWFEIVKNHCKDESNILDIGCGT
                     GSLTVQLEALGNVTGMDLSVDMLTVAAQKSANVNWLEGDMTSFDLQQQFDIITIFCDS
                     LNYLQDETAVIETFINVYHHLTDSGVFIFDVHTVYKMMNLFNNQSYIDDKGDIFLAWD
                     AVQGDLPLSVYHDMTFFIRHEDETYSRFDESHFQRTFDEKTYLSWLAQVGFKQVETFT
                     DFNIDEHNEDAERLFFIAKK"
     gene            7241..7927
                     /locus_tag="OY092_001920"
     CDS             7241..7927
                     /locus_tag="OY092_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001802022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HCX1076860.1"
                     /translation="MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYT
                     SRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMT
                     SKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
                     GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKT
                     FDKLKSYFTI"
     gene            8019..8480
                     /locus_tag="OY092_001921"
     CDS             8019..8480
                     /locus_tag="OY092_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000439692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HCX1076861.1"
                     /translation="MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYN
                     GSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCT
                     KSIIQAGIKRIYYAEDYHNHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG"
     gene            8485..10686
                     /locus_tag="OY092_001922"
     CDS             8485..10686
                     /locus_tag="OY092_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HCX1076862.1"
                     /translation="MLYVALSMIVGVLWNSSKVLSTFLFIFLLYITYRKNKIVYAPIS
                     LFLIIFSSWYLHYSQQAIFNYINYIERNSQFNERAQVIQIQRQGSDTYKGRLSLKNEI
                     YPFFLTNKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLESNRSNLIEK
                     HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAI
                     VFLIYQPLKRLNLPLFVIKGITIIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKI
                     KGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFI
                     AQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYL
                     VDLSFNFHDWLLDLFTRIKQSHFSVPKFNDWIFIIFIISVYYIFWLLAKRKYILVTVW
                     TIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKVIDDTKQPSYS
                     ISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTL
                     MLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKK
                     VLLMGDASKNNESLLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKN
                     NMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSNSYGNASGL"
     gene            10743..>11259
                     /gene="holA"
                     /locus_tag="OY092_001923"
     CDS             10743..>11259
                     /gene="holA"
                     /locus_tag="OY092_001923"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HCX1076863.1"
                     /translation="MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYE
                     TEIAPIVEETLTLPFFSDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGENL
                     IVFEIYQNKLDERKKLTKTLKKHARLKKIEQMSEEEIKKWIQSKLNENFKDIKRDALD
                     LFIELTGINFNI"
BASE COUNT         4156 a         1379 c         2046 g         3678 t
ORIGIN      
        1 gggagtttga agttaaatat ttaacaggat ttattttaat attattgtta gaaggaattt
       61 ttacaaattc agcaagtgca atcgaatatt cagacttaca tcataaaagt gaacttgatt
      121 ccaagcgtct atataatgct aaggtgtcat ttgctaatcc aactcagctt gaaaataaaa
      181 aaacaaacga tagactgttg aagcatgatt tgttatttca tgacatgttc gtaaatgatg
      241 cttggaaaaa agattttaaa gttgaattcg aaaatgaggc actttcaaag aaatttgtaa
      301 ataaggatat cgatatattt gctggaaatt atggatatgg atgtcatggg ggagaaacca
      361 ataaaacgct atgtagttat ggtggtgtta ctttaagtga caataataaa tacgatgatt
      421 ataagaatat accttgtaat ttatggattg acggacatca aacaggaata gaactaactg
      481 cagtaaaaac gaaaaagaaa attgttacca ttcaagaatt agatgttcaa ttaagaaatt
      541 atttgaatga gaagtataag ttgtacgaac taggtggaga cattgttaaa gggtatgtta
      601 aatatcataa tgatgatgaa aaaaatgtag aatatgattt ttataattta aatggtgagt
      661 atggtcatga ggtattaaaa atgtatgctg ataataaaac tatcaatagt gacaaattgc
      721 atttagatat ctatttattc aaatcataat ttaagtaagt taatcattaa tgatctttga
      781 cagtgaaata taaagtacct gtcattttat tgttacaaat aaaaacagca gtaaggaggc
      841 tatcactcag aaaagtctta ctgctgtttt ctattagaat tacctttaat gcacacagga
      901 attcgatacg aaacaaatat gattaactgt gtaattacaa aataaaacta ctatagcaaa
      961 aagaagataa agacgatgat aataaatgca tcgaatataa ttttcttgat gtttttatca
     1021 acaacatcag gtaaggacat aagtataaat cctagaatta gagtgtagcg acatatgttc
     1081 ataattgttg ctgtaaactc gatattaaat gaaaacttta aaaatatact tataaataaa
     1141 atgacaaacg acgcaattgc aataaaactg ccgtatgtag caatctttgt tacgagacta
     1201 ttttgattat tttcagccat tgtagaatcc tcttatttca tcattattat tttaaacata
     1261 tcattttcct gttatttaat aaagtttctt gacacaatta gctgatgtaa ttgatttgat
     1321 tagtttttga aaaatagaca atttagaagc atcgatttcc ttgttatgag ttcataaata
     1381 attatttatg ataccacgtt attgtgaatg tttttttaaa aaataaagca aaagttttat
     1441 acagtaacga aaatcatgat acttgtcgtt gtagtgatta aaatgtgata aaataacaaa
     1501 tgctaggatt ttttaaaaga ggtgaatcaa aggatgattg gtataattgg tgccatggaa
     1561 gaagaagtaa caatattaaa aaataaatta acacaattaa gcgaaatttc agttgcacat
     1621 gttaaatttt atactggcat tttaaaagat agagaagtag tgattaccca aagcggcatt
     1681 ggaaaagtta atgctgcaat ttctacgaca ttattaatta ataagtttaa accggacatc
     1741 attattaata caggttctgc tggagcttta gatgaaagtt taaatgtagg tgacgttctt
     1801 ataagtgatg atgtaaaata tcatgatgca gatgcaacag catttggtta tgaatatgga
     1861 caagtaccac agatgccggt agcatttcaa tcaagtaaac ctttaataga taaagtatct
     1921 caagttgtac aacaacaaca attaacagct aaagtaggct taattgtaag tggtgatagc
     1981 tttatcggta gtgttgaaca acgccaaaaa attaaaaaag catttccaaa tgcgatggcg
     2041 gttgaaatgg aagcaactgc aattgcacaa acatgttatc aatttaatgt accatttgtt
     2101 gtagttcgtg cagtttcaga cttagcaaat ggagaagcgg aaatgagctt cgaagcattt
     2161 ttagaaaaag cagctgtatc atcaagtcaa actgttgaag cattagtgtc tcaattataa
     2221 aaaggtaaag gtgagttaaa tgggtttagt tcgcaagttt tttatgccga attcatatgt
     2281 tcaatcaata tttcaaattg atttagacaa gttagtggac aaaggcgtta aaggtattat
     2341 tacagattta gataatacgc tagtaggttg ggatgttaaa gaacctacag aacgtgttaa
     2401 agcatggttt aaggaagcta atgaaaaagg aatcactatt acaatcgtgt ctaataataa
     2461 tgagtctcgt gttgctagtt ttagtcagca tttagacatc gattttattt ttaaagcgag
     2521 aaagccaatg gggaaagcgt ttgataaagc aataactaag atgaatatca gaccagatca
     2581 aactgttgtt ataggtgacc aaatgcttac tgatgtattt ggtggtaatc gtcgaggttt
     2641 atatacaatt atggtcgttc cagttaaacg aactgatggc tttattacta agtttaatag
     2701 gttaattgaa agacgattat tacgtcattt cagtaaaaaa ggttatatca catgggagga
     2761 aaattgattg tctgacattt taaaatgtat cggttgtggt gcgccacttc aatctgaaga
     2821 taaaaataaa cctggttttg taccagagca taatatgttt cgtgatgacg tgatttgcag
     2881 acgttgtttc cgcttgaaaa attataatga agttcaagat gtaggattag aaagtgaaga
     2941 ctttttaaaa ttattatcag gacttgcgga taaaaagggt attgtcgtca atgtcgtgga
     3001 tgtatttgac tttgaaggat catttattaa tgcagttaaa cgtattgtcg gaaacaaaaa
     3061 aatcatttta gcagcaaata aattggattt attgccgaaa caaattaata aacgtcgagt
     3121 taaagaatgg ttaaaacgaa cagcaagaaa atatggtttg gaagctgacg atgtcgtatt
     3181 aatttcagct gaaaaaggct ggggcataga cgacttatta tcatcaattg cgaatattcg
     3241 agaaaatgaa gatgtgtata ttgtagggac aacgaatgtt gggaaatcta cattgattaa
     3301 taaactgatt gaagctagtg ttggtgaaaa agatgtagta acaacttcaa gatttcctgg
     3361 aacaacttta gatatgatag atattccttt agatgaaaca tcatttatgt atgatacacc
     3421 aggtattatt caagatcatc aaatgacgca tttagttagt gaaaaagaat tgaaaattat
     3481 tatgcctaag aaagaaataa aacaacgcgt atatcaatta aatgaggcgc aaacattatt
     3541 cttcggcggt ctagcgcgca tagattatgt atcaggtggt aaacgtccgt tagtttgttt
     3601 cttttctaat gacttgaata tacatcgtac taaaacggag aaggctaatg atttatggcg
     3661 taatcaactt ggcgatttat taacgccacc tggaaatcca caaaattttg atcttaatga
     3721 ggtaaaggct gttagacttg aaacaggcaa agagaaacgc gatgttatga tctctggtct
     3781 aggctttata actataggac caggagctaa agtaatcgtt cgtgttccta aaaatgttga
     3841 tgttgtatta agaaattcta ttttataagg tgatttaaaa aatgaaattt gcagttatcg
     3901 gaaatcctat ttcacattcc ttgtcgcccg ttatgcatag agcaaatttt aattctttag
     3961 gattagatga tacttatgaa gctttaaata ttccaattga agattttcat ttaattaaag
     4021 aaattatttc gaaaaaagaa ttagatggct ttaatatcac aattcctcat aaagagcgta
     4081 tcataccgta tttagatcat gttgatgaac aagcgattaa tgcaggtgca gttaacactg
     4141 ttttgataaa agatggcaag tggatagggt ataatacaga tggtattggt tatgttaaag
     4201 gattgcacag cgtttatcca gatttagaaa atgcatacat tttaattttg ggcgcaggtg
     4261 gtgcaagtaa aggtattgct tatgaattag caaaatttgt aaagcccaaa ttaactgttg
     4321 cgaatagaac gatggctcgt tttgaatctt ggaatttaaa tataaaccaa atttcaatag
     4381 cagatgctga aaagtattta gctgaattcg atatcgttat taatacaaca ccagcgggta
     4441 tggctggaaa taacgaaggt attattaatt taaagcatct ttctcccaat actttaatga
     4501 gtgatattgt ttatataccg tataaaacac ctattttaga ggaagcagag cgcaagggaa
     4561 accatattta taatggctta gatatgtttg tttaccaggg tgcggaaagc tttaaaattt
     4621 ggactaataa agatgctgat attaattcta tgaaaacagc agttttacaa caattaaaag
     4681 gagaataaca tatgcttact ggcaaacaaa aaagatactt aagaagttta gcacacaata
     4741 ttgatccgat ttttcaaatt ggaaaaggcg gtatcaacga aaatatgatt aaacaaatag
     4801 atgatacgtt agaaaacaga gaattgatta aagtgcatgt actacaaaat aactttgatg
     4861 ataaaaaaga attagctgaa acattaagcg aagctacgcg tagtgaatta gtgcaagtga
     4921 ttggatctat gatagtgatt tatagagaat ctaaagaaaa taaagaaatt gaattgccat
     4981 aataatgaaa aagatagtac tttacggcgg tcagtttaac cctatccata ctgcacatat
     5041 gatagtagct agcgaagtat ttcatgaatt acagccagat gaattttatt ttttacctag
     5101 ttttatgtct ccattgaaaa agcacaataa ttttatagat gttcagcaca gattaacaat
     5161 gatacagatg attatcgacg agcttggttt tggagatatt tgcgacgatg aaattaaacg
     5221 tggtggtcag agttatacct atgacacgat caaggcattc aaggagcaac acaaagacag
     5281 tgagttgtac tttgttattg ggacggatca gtataaccaa ctagagaaat ggtatcaaat
     5341 tgaatactta aaagaaatgg ttacttttgt agttgtaaat cgagacaaaa atagtcaaaa
     5401 tgttgaaaat gctatgattg caattcagat acctagggta gatataagtt cgacaatgat
     5461 tcgacaaaga gttagtgaag ggaaatctat ccaagttctt gttcctaaat ccgttgaaaa
     5521 ctatattaag ggggaaggat tatatgaaca ttgaaaaagc aaaacggctt gcaaaagaga
     5581 aactgccaga gaaacgttat aatcattctt taagagttgc agaaacagct attaaattgg
     5641 cagaaattta tgatggagac actagtaaag tagaattagc aggtgtatta catgatttct
     5701 gtaagtatga tgatttaggt aaaatgtatc aaattgttcg acaatacgaa ttaggtaatg
     5761 acctactgag ttatggtagt gaaatattgc atggccctgt gtgtgcagca atcatggaac
     5821 atgaatatgg tatcaatgat gaggaagtat taatggctat caaataccat actactggac
     5881 gtcaacaaat gacaaaaact gaaaaactga tttttattgc agattacatc gaacctggaa
     5941 gaacaatccc aggagttgat gatattcgag atatggcata caatcaaggt agtttagata
     6001 agacaattta tgaaatttct aaacgcacag tactattttt aatacagaaa gatattacgg
     6061 tatataataa gacgattgac tgtttaaatt attataacta tagtgacgaa agaataaagg
     6121 atgattaaat gaattcacaa gaattattag caattgctgt ggatgcaatt gacaataaaa
     6181 aaggcgaaga tacgatttct ttagaaatga aaggtatcag cgatatgaca gattattttg
     6241 ttgtaacgca cggaaataat gaacgacaag ttcaagcgat tgctagagcg gtgaaagaag
     6301 tagccaatga acaaaatata gaagtaaaac gtatggaagg atacaatgaa gcgcgttgga
     6361 tattaattga cttagctgat gttgtggtac atgttttcca taaagacgaa agaaattatt
     6421 ataatattga aaagttatat caagatgcac cattagaatc atatagtcag gttgcgtatt
     6481 aattatgtcg caatatgcag aaatgagcct agtgtacgat caattgactc aagatcaacc
     6541 atatgaaaaa tggtttgaaa ttgtaaaaaa tcactgcaaa gatgaatcaa atattttaga
     6601 tattggatgc ggtactggta gtttaacagt tcaattagaa gctttaggta atgttactgg
     6661 tatggattta agtgttgata tgttgactgt tgcagctcaa aaatcagcaa atgtaaattg
     6721 gcttgaagga gatatgacat cttttgattt gcaacaacaa tttgatatca tcactatttt
     6781 ttgtgactct ctaaattatt tgcaagatga aactgcagtg attgaaacat tcatcaatgt
     6841 ttatcatcat ctgactgatt caggtgtatt tatttttgat gtacatactg tttataaaat
     6901 gatgaatttg tttaataatc aaagttatat tgatgataaa ggggacattt ttttagcatg
     6961 ggatgctgtg caaggagatt tacctttaag tgtttatcat gatatgacat ttttcattcg
     7021 acatgaagat gaaacatatt caaggtttga tgagtctcat tttcagagaa catttgatga
     7081 aaagacatat ttgtcttggt tagctcaagt tggttttaaa caagttgaaa catttactga
     7141 ttttaatata gatgaacata atgaagatgc agaaagattg tttttcattg cgaaaaaata
     7201 aaagtaaaac cactcgctca gacgtgtata aagttgagga gtggttttat tgtatcaatt
     7261 tttattacgc tataaagatt ttttaactca gtggaagtta tatattataa gtgctgttgt
     7321 tttaattatg gtattaattg gttttatatt ctggagacaa gatgattata cttcaagaaa
     7381 ttttgaaaat aaagatactg ctctgaaaca aagcactagt gaaaatagta gtttgtccaa
     7441 attagaagat gtccaggtca aagatggaga taattccaaa aataaaggtc ctgtatatgt
     7501 cgatgtaaaa ggtgctgtta aacatcctaa tgtttataaa atgacatcta aggatagagt
     7561 agttgattta cttgataaag cacaattatt ggaggatgca gatgtaagtc aaattaattt
     7621 gtctgaaaaa ttaacagatc aaaaaatgat tttcatacct cataaaggac aaaagaatgt
     7681 tgaaccacaa attggagtaa acagtgtgca tgtaaaaaat gggaacacaa ataatactaa
     7741 agtaaattta aataccgcat ctgtatcaga attgatgtct gttcctggag tagggcaagc
     7801 taaagctaat gcaattgttg aatatcgcaa ccaacaaggt gcatttcaag aaattgacga
     7861 tttgaaaaaa gtaaaaggtt ttggaagtaa aacttttgat aaactgaaat cttatttcac
     7921 gatataatgg attattttaa ttgcaaattt tattttttgt gattaatctt atattattag
     7981 aaaatgttac taaattttaa gtatggaagg tgaacatctt ggaaagaatc aaatgggaag
     8041 aatattttat ggcacaaagt catttgctag cattacgttc aacttgtcaa agattatctg
     8101 taggtgcaac gattgttaag gataatcgta ttattgctgg tggttataat ggctctgtag
     8161 ctggcgaggt gcattgtata gatgaaggat gtttaattga agatggacat tgtatcagaa
     8221 cgatacatgc agaaatgaat gctttattac aatgtgcaaa acaaggtgta tctactgaag
     8281 gtgcaacaat ctatgttact cattttccat gcctaaattg tacaaagtca attattcaag
     8341 caggtataaa gcgtatctac tatgcagaag attatcataa ccatgaatat gcaactaaat
     8401 tactcaaaca atctggtatt gaatttaaaa aaattccatt ttcaccagaa tatgttgcta
     8461 aatatctgac taaaggttaa tgttttgctg tatgtcgcgt tatcaatgat tgtaggagtg
     8521 ctttggaatt ctagcaaagt gctctctaca tttcttttca ttttcctttt gtatattact
     8581 tatcgtaaaa ataaaatcgt ttatgcccct atttctctct ttttaatcat tttctcctca
     8641 tggtatttac attattcaca acaagcaata tttaattata tcaattatat tgaacgtaat
     8701 tctcagttta atgagcgtgc tcaagtaatc caaattcaac gtcaaggtag tgacacatat
     8761 aaaggtaggt tgagtttaaa aaatgaaata tatcctttct ttttaacaaa taaaaagaat
     8821 tttgatttaa agaaaattga aagtcgtaat tgtattgtta aaggacaatt caaagttaat
     8881 gacaataagt ttgtaactct taaattacaa agtatagttg tacaaagctg cctagaatcg
     8941 aaccggtcta atttaattga gaaacataaa cagtttataa tgaatcgaat ttatgattcg
     9001 ggtattaagt ttccggatcg tattatggca ttgattactg gtgacgtaaa agaaattaat
     9061 gagcaattta aggaacgtgt taaagagata ggtatatatc atttgctggc agttagtggc
     9121 tcgcatatag ctgcaattgt attcttaatt taccaacctt taaaacgatt aaatttacct
     9181 ttatttgtca ttaaaggaat tacaatcatt gtattagctt tatttgctca atacacaaat
     9241 tatgcaccta gtgctgtaag agctataata atgacaactc ttgtactgct tattactaag
     9301 caaattaaaa taaagggtat tcagctatta gcatttgcat ttataattat gtttatttta
     9361 aatccactag ttgtttatga tattggattt caattttcat tcatcatttc attttttatt
     9421 atgctacttt ttcctttttt acagcaattg tcaaagttac aatcattatt cataattacg
     9481 tttattgcac aattagcttc atttatcgtt gccattccaa actttcatca acttcaatgg
     9541 gtgggatttt tatctaattt gatttttgta ccgtactatt cgattatatt gtttccgcta
     9601 tctattttat tctttattac aagtcatttt attgtgggat taacgccgct aaattacttg
     9661 gttgacctaa gttttaattt tcatgactgg ttactagacc tattcacaag aatcaagcaa
     9721 tcacattttt ctgttcccaa gtttaatgat tggatattta taatatttat aatttctgtt
     9781 tattacatat tttggttatt ggctaaacgt aaatatatat tggttacggt ttggactata
     9841 attattctga cattattaat aacgtttcca acaaattcac atcacaaaat tacaatgtta
     9901 aatgtggggc agggagacag tattttatat gaaggtggta agaaccaaaa tgtcttgatt
     9961 gatacaggtg ggaaagtgat tgatgatact aaacaaccta gttattcaat ttctaaatat
    10021 catattttac caacgctaaa tgaaagaggg ataaatgaat tagagtatct aattttaaca
    10081 catccacaca atgaccatat tggtgaagtg gaatatatta ttagtcatat taaaattaaa
    10141 catatagtga tatacaataa gggatatagt agtaatacat tgatgttatt atcgaaatta
    10201 agccataagt ataacattaa acttatggat gtaagacaag ttagtagttt taaacttgga
    10261 gatagtagtt ttctattttt tgatagtttt attccaaata gccgagataa aaatgaatat
    10321 tctattatta ctatgattac atatcaaaat aaaaaagttt tattaatggg cgatgctagt
    10381 aaaaataatg aatctttact actaaaaaaa tataacttgc cggagattga tattttaaaa
    10441 gtaggacatc atgggagcaa gacaagtagt tctaaagaat ttatagagat gattaagcct
    10501 aaaataagtt tgatttcttc tgggaagaac aatatgtatc atcttcctaa tatagaagtt
    10561 gttaaacgat tgcaaaggat tcgcagtcgc atttacaata gtcaacaaaa cggtcaagtt
    10621 acaattgact tagatgataa tttaaaagtt gattcaaact cttatggaaa tgcaagtggt
    10681 ttatagatac agaaacatga tataatctat tgatgtgtca aacgaatgaa agggtgtaat
    10741 gaatgagcga caatattgta gctatttatg gagatgtgcc tgaattggtt gaaaaacaaa
    10801 gtgcagaaat catatcacaa tttttgaaaa gtgatagaga tgactttaac tttgtgaaat
    10861 ataatttata cgaaacagag attgcaccaa ttgttgaaga aacattaaca ttgcctttct
    10921 tttcagataa aaaagcaatt ttggttaaaa atgcatatat atttacaggt gaaaaagcgc
    10981 caaaagatat ggctcataat gtagatcaat taatagaatt tattgaaaaa tatgatggcg
    11041 aaaatttgat tgtctttgag atatatcaaa ataaacttga tgaaagaaaa aagttaacta
    11101 aaactctaaa aaagcatgca aggcttaaaa aaatagagca aatgtctgaa gaagaaataa
    11161 aaaaatggat tcaaagtaaa ttaaatgaga atttcaaaga tatcaaaaga gatgcattag
    11221 atttatttat tgagttgaca ggtattaact ttaatattg
//
LOCUS       DAKPJH010000083        11190 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.083, whole genome shotgun sequence.
ACCESSION   DAKPJH010000083 DAKPJH010000000
VERSION     DAKPJH010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11190
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.083"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            12..3473
                     /gene="sdrE"
                     /locus_tag="OY092_001924"
     CDS             12..3473
                     /gene="sdrE"
                     /locus_tag="OY092_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047430389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin SdrE"
                     /protein_id="HCX1076864.1"
                     /translation="MINRDNKKAITKKGMISNRLNKFSIRKYTVGTASILVGTTLIFG
                     LGNQEAKAAENTSTENAKQDDATTSDNKEVVSEAENNSTTENDSTNPIKKETNTDSQP
                     EAKEESTTSSTQQQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNN
                     TNNDVTTKPSTSEIQKKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKE
                     ELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVN
                     DLIKVTKQTIKVGDGKDNVAAAHDGKDIEYDTEFTIDNKVKKGDTMTINYDKNVIPSD
                     LTDKNDPIDITDPSGEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKT
                     VPNETSLNLTFATAGKETSQNVTVDYQDPMVHGDSNIQSIFTKLDEDKQTIEQQIYVN
                     PLKKSATNTKVDIAGSQVDDYGNIKLGNGSTIIDQNTEIKVYKVNSDQQLPQSNRIYD
                     FSQYEDVTSQFDNKKSFSNNVATLDFGDINSAYIIKVVSKYTPTSDGELDIAQGTSMR
                     TTDKYGYYNYAGYSNFIVTSNDSGGGDGTVKPEEKLYKIGDYVWEDVDKDGVQGTDSK
                     EKPMANVLVTLTYPDGTTKSVRTDANGHYEFGGLKDGETYTVKFETPAGYLPTKENGT
                     TDGEKDSNGSSVTVKINGKDDMSLDTGFYKEPKYNLGDYVWEDTNKDGIQDANEPGIK
                     DVKVTLKDSTGKVIGTTTTDASGKYKFTDLDNGNYTVEFETPAGYTPTVKNTTAEDKD
                     SNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTL
                     QNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTVTNTTEDDKDADGGEV
                     DVTITDHDDFTLDNGYFEEDTSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDAGKHTPVKPMSTTKDHHNKAKALPETGSENNGSNNATLFGGLFAALGSLLLFG
                     RRKKQNK"
     gene            3592..5064
                     /locus_tag="OY092_001925"
     CDS             3592..5064
                     /locus_tag="OY092_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCX1076865.1"
                     /translation="MNYILGTILESKITGVEKAQINRLKLFKQHGISSKCVYVKWNPY
                     SYTYAKQHQIENDVFTMYDYFQKAINYKKTKQVNWIQYWEKSCRYTLKFVENSNDVRI
                     YDEEQFVMYAHFLDKQYHHLNYVNYFDHKRRKVKRELYDGRGFLSCSRILGEGQRIVL
                     ENYYTPNGEIVIQKYFDDIKGKNTLTKVILNEDQHQQFFDTEDELVQYFLHQLCKNND
                     QIILDRPHELGNVIAGLNQSIPVIVVLHSTHLADTGNGIKSFYKTVFNNLTRYKAIVV
                     STEQQCQDISQYIENKIPVINIPVGYVANLKYQFDINQKEKNHIISIARLVENKQIKH
                     QVEVIKQLVTKHPNIQLNIYGHGNGLSEYRQLVEDYHLSEHVKFHGFKTHINEEIAKA
                     ELMLSTSKMEGFGLAILESLSVGTPVISYDVDYGPSELIQDGFNGYLVPQGDINQMVE
                     KVDQLLNNTQKLQQFSINSIESAQQYNATTISTKWQNILN"
     gene            complement(5189..6679)
                     /locus_tag="OY092_001926"
     CDS             complement(5189..6679)
                     /locus_tag="OY092_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCX1076866.1"
                     /translation="MNYFVGNSLGVNLTGIEKAIINRLNLFKEMGRPAQCVFLSWNRY
                     LYRNAQNYITSSDYINMYDFFQEATYLERNEPFDWLSYWTDECHYTLKHVENSHDFRI
                     YDQERFLMYAHFQDPKYRILDYVNHFDSQRRKVKRDFYDVRGFLSCSRILVDKQQTLC
                     EFFYNPEGDTKLEKYFSYKDGKPEVQKIIVYYANKQYFFNNETELGAFFIKQLYQHGD
                     LFFSDRNVYTAPIFNLTPESIPVVAVLHSTHIKNIDALDSSPFKNVYKAMFENLSRYR
                     AIIVSTEQQKLDVEKRINRTIPVVNIPVGYSETIDTPVQTLDQRSVKLISVARYSPEK
                     QLHQQIELIKRLVSYVPKIELHMYGFGSESKKLNELIQKYGLENHVYLRGFLSNLDQE
                     YSDAYLSLITSNMEGFSLALLESLAHGVPVISYDIKYGPNELITPDFNGYLITKNDED
                     ALFDKVKYVIDHPEVQQRLSKGSLAKAQQYSKASLIKQWDQFVRLI"
     gene            complement(6961..7839)
                     /locus_tag="OY092_001927"
     CDS             complement(6961..7839)
                     /locus_tag="OY092_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HCX1076867.1"
                     /translation="MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFL
                     FEIEEVGIKNLVYPVLVDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIEL
                     EFNTLYQVLRTLQTNMKQNAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDK
                     VTRKELTIEATVTTLCPCSKEISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAM
                     EANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNE
                     ESIHQHDAFAKLKYRK"
     gene            complement(7852..8517)
                     /gene="bshB2"
                     /locus_tag="OY092_001928"
     CDS             complement(7852..8517)
                     /gene="bshB2"
                     /locus_tag="OY092_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB2"
                     /protein_id="HCX1076868.1"
                     /translation="MTDERHVLVIFPHPDDETFSSAGTLASYIQKGIPVTYACLTLGQ
                     MGRNLGNPPFATRESLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHIDGMI
                     KSLIDDTNPSLIISFYPGYAVHPDHEATADAVIRTVERMPKEERPRLTLVAFSNDATE
                     ALGEPDIQNDITDFKELKIKAFEAHASQTGPFLKQLASPEIDGKQHSFLTVEPYWTYH
                     FKS"
     gene            complement(8531..8893)
                     /locus_tag="OY092_001929"
     CDS             complement(8531..8893)
                     /locus_tag="OY092_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YojF family protein"
                     /protein_id="HCX1076869.1"
                     /translation="MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNA
                     GTFLRNIQITYTHAQLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFN
                     YEGQLAAALQISERPFNL"
     gene            9169..9927
                     /gene="nagB"
                     /locus_tag="OY092_001930"
     CDS             9169..9927
                     /gene="nagB"
                     /locus_tag="OY092_001930"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HCX1076870.1"
                     /translation="MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLY
                     EQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHI
                     PNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTE
                     STIKANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVD
                     VPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD"
     gene            10004..10636
                     /gene="hxlA"
                     /locus_tag="OY092_001931"
     CDS             10004..10636
                     /gene="hxlA"
                     /locus_tag="OY092_001931"
                     /EC_number="4.1.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="HCX1076871.1"
                     /translation="MELQLAIDLLNKEDAAELANKVKDYVDIVEIGTPIIYNEGLPAV
                     KHMADNISNVKVLADMKIMDAADYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKN
                     NKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLESLRTVKSVIKNS
                     KVAVAGGIKPDTIKEIVAESPDLVIVGGGIANADDPVEAAKQCRAAIEGK"
     gene            10638..11186
                     /gene="hxlB"
                     /locus_tag="OY092_001932"
     CDS             10638..11186
                     /gene="hxlB"
                     /locus_tag="OY092_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-3-hexuloisomerase"
                     /protein_id="HCX1076872.1"
                     /translation="MAEFSDYQLILDELKMTLSHVEADEFSTFASKILHAKHIFVAGK
                     GRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAK
                     SVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVV
                     MGLMTEMNVTEQTMQQNHANLE"
BASE COUNT         4094 a         1781 c         1939 g         3376 t
ORIGIN      
        1 aggagattta tatgattaac agggataata aaaaggcaat aacaaaaaag ggtatgattt
       61 caaatcgctt aaacaaattt tcgattagaa agtatactgt aggaactgca tcgattttag
      121 taggtacgac attgattttt ggtctaggga accaagaagc taaagctgct gaaaacacta
      181 gtacagaaaa tgcaaaacaa gatgatgcaa cgactagtga taataaagaa gtagtgtcag
      241 aagctgaaaa taattcgaca acagaaaatg attcaacaaa tccaattaag aaagaaacaa
      301 atactgattc acaaccagaa gctaaagaag aatcaactac atcaagtact caacaacagc
      361 aaaataacgt tacagctaca actgaaacta agcctcaaaa cattgaaaaa gaaaatgtta
      421 aaccttcaac tgataaaacc gcgacagaag atacatctgt tattttagaa gagaagaaag
      481 cgccaaataa tacaaataac gatgtaacta caaaaccatc tacaagtgaa attcaaaaaa
      541 aaccaactac acctcaagaa tctacaaata ttgaaaattc acaaccgcaa ccaacgcctt
      601 caaaagtaga caatcaagtt acagatgcaa ctaatccaaa agaaccagta aatgtgtcaa
      661 aagaagaact taaaaataat cctgagaaat taaaagaatt ggttagaaat gatagcaata
      721 cagatcattc aactaaacca gttgctacag ctccaacaag tgttgcacca aaacgtgtaa
      781 acgcaaaaat gcgctttgca gttgcacaac cagcagcagt tgcttcaaac aatgtaaatg
      841 atttaattaa agtgacgaag caaacaatca aagttggcga tggtaaagat aatgtggcag
      901 cagcgcatga cggtaaagat attgaatatg atacagagtt tacaattgac aataaagtca
      961 aaaaaggcga tacaatgacg attaattatg ataagaatgt aattccttcg gatttaacag
     1021 ataaaaatga tcctatcgat attactgatc catcaggaga ggtcattgct aaaggaacat
     1081 ttgataaagc aactaagcaa atcacatata catttacaga ctatgtagat aaatatgaag
     1141 atataaaatc acgcttaact ctatattcgt atattgataa aaaaacagtt ccaaatgaga
     1201 caagtttgaa tttaacattt gctacagcag gtaaagaaac aagccaaaat gtcactgttg
     1261 attatcaaga tccaatggtc catggtgatt caaacattca atctatcttt acaaaattag
     1321 atgaagataa gcaaactatt gaacaacaaa tttatgttaa cccattgaaa aaatcagcaa
     1381 ccaacactaa agttgatata gctggtagtc aagtagatga ttatggaaat attaaactag
     1441 gaaatggtag taccattatt gaccaaaata cagaaataaa ggtttataaa gttaactctg
     1501 atcaacaatt gcctcaaagt aatagaatct atgattttag tcaatacgaa gatgtaacaa
     1561 gtcaatttga taataaaaaa tcatttagta ataatgtagc aacattggat tttggtgata
     1621 ttaattcagc ctatattatc aaagttgtta gtaaatatac acctacatca gatggcgaac
     1681 tagatattgc ccaaggtact agtatgagaa caactgataa atatggttat tataattatg
     1741 caggatattc aaacttcatc gtaacttcta atgactctgg cggtggtgac ggtactgtta
     1801 aacctgaaga aaagttatac aaaattggtg actatgtatg ggaagacgtt gataaagacg
     1861 gtgttcaagg tacagattca aaagaaaagc caatggcaaa cgttttagtt acattaactt
     1921 acccggacgg tactacaaaa tcagtaagaa cagatgcgaa tggtcattat gaattcggtg
     1981 gtttgaaaga cggagaaact tatacagtta aattcgaaac gccagctgga taccttccaa
     2041 caaaagaaaa tggaacaact gatggtgaaa aagactcaaa tggtagttct gtaactgtta
     2101 aaattaatgg taaagatgat atgtctttag acactggttt ttataaagaa cctaaatata
     2161 atcttggtga ctatgtatgg gaagatacaa ataaagatgg tatccaagat gctaatgaac
     2221 ctggtatcaa agatgtcaag gttacattga aagatagtac tggaaaagtt attggtacaa
     2281 ctactactga tgcctcgggt aaatataaat ttacagattt agataatggt aactatacag
     2341 tagaatttga aacaccagca ggttacacgc caacggttaa aaatactaca gctgaagata
     2401 aagattctaa tggtttaaca acaacaggtg tcattaaaga tgcagataat atgacattag
     2461 acagtggttt ctataaaaca ccaaaataca gtttaggtga ttatgtttgg tacgacagta
     2521 acaaagacgg caaacaagac tcaactgaaa aaggtattaa agatgtgaca gttacattgc
     2581 aaaacgaaaa aggcgaagta attggaacaa ctaaaacaga tgaaaatggt aaatatcgtt
     2641 tcgataattt agatagcggt aaatacaaag ttatttttga aaagcctgct ggcttaacac
     2701 aaacagttac aaatacaact gaagatgata aagatgcaga tggtggcgaa gttgacgtaa
     2761 caattacgga tcatgatgat ttcacacttg ataacggata cttcgaagaa gatacatcag
     2821 acagtgattc agactcagac agcgattcag actcagatag cgattcagac tcagatagcg
     2881 attcagactc agacagcgat tcagattcag acagcgactc agactcagat agtgattcag
     2941 attcagatag cgactcagac tcagatagcg actcagattc ggacagcgat tcagactcag
     3001 atagcgactc agattcagac agcgattcag actcagatag cgactcagat tcagacagtg
     3061 actcagactc agatagcgac tcagactcag acagtgactc agactcagac agcgattcag
     3121 attcagatag cgactcagac tcagatagcg actcagattc ggacagtgat tcagactcag
     3181 atagcgactc agattcagac agcgactcag attcggacag cgactcagac tcagatagcg
     3241 actcagattc ggacagcgac tcagactcag atagcgattc ggactcggat gcaggaaaac
     3301 atacacctgt taaaccaatg agtactacta aagaccatca caataaagca aaagcattac
     3361 cagaaacagg tagtgaaaat aacggctcaa ataacgcaac gttatttggt ggattatttg
     3421 cagcattagg ttcattattg ttattcggtc gtcgcaaaaa acaaaacaaa taatacaata
     3481 tgacccaggt ccttgtggcc tggttttttt ataattacac atgcaataga tgtatttttc
     3541 atataaaata aacaataaag atacggaata aaacttatat gaggcgataa tatgaattac
     3601 attttaggaa caattttaga aagtaaaatt acaggtgtag aaaaagcgca aataaataga
     3661 ttgaagttgt tcaaacaaca cggcatatct tcaaaatgtg tatatgttaa atggaatcct
     3721 tattcataca catatgcgaa gcaacatcag attgaaaatg atgtatttac aatgtatgac
     3781 tattttcaaa aagcaatcaa ttataaaaag acaaagcaag ttaactggat acagtattgg
     3841 gaaaagtcat gtaggtacac attgaaattt gtggaaaatt caaatgatgt cagaatatat
     3901 gatgaagagc aatttgtaat gtatgcacat tttttagata aacagtatca tcatttaaac
     3961 tatgtgaatt attttgatca taaaagaaga aaagtaaaac gcgaattgta tgatggaaga
     4021 ggctttttaa gttgttctcg aattttaggt gaaggacaac ggattgtact cgaaaattac
     4081 tatacaccta atggggaaat cgtcatccaa aaatatttcg acgatataaa agggaaaaac
     4141 acgctcacaa aggttatctt aaatgaagat cagcatcaac aattttttga tacagaagat
     4201 gaattagttc aatattttct ccatcaatta tgtaaaaata atgatcaaat catattagat
     4261 cgtcctcatg aattaggaaa tgttatagcg ggattaaatc aaagtattcc agttattgtt
     4321 gtgctccaca gtacacattt agccgacacc ggtaatggta taaaaagttt ttataaaaca
     4381 gtgtttaata atttaacacg ttataaagcg attgttgtat caacagaaca gcaatgccaa
     4441 gatatttcac aatatattga aaataaaata ccagttatca atattccggt tggctacgtg
     4501 gcaaatttaa agtatcaatt tgacatcaat caaaaggaga aaaatcatat catatcaatt
     4561 gctcgcctcg ttgaaaataa acaaattaaa catcaagttg aagtgatcaa gcaattagta
     4621 acaaaacatc ccaatattca attaaatatt tatggacatg gaaatggttt gtcagaatat
     4681 cgacaacttg tagaagatta tcatttatcg gaacatgtaa aatttcatgg ttttaagacg
     4741 catattaatg aagagattgc taaagcagaa ctgatgttat cgacaagtaa aatggaaggt
     4801 tttggcttag caattttaga gtcgctttca gtaggtacac cagtgatcag ttatgatgta
     4861 gattatggtc catcagaact gattcaagat ggatttaatg gctatttagt acctcaaggt
     4921 gacatcaatc aaatggttga aaaggtcgac caattactaa ataatactca aaaattgcaa
     4981 cagttttcga ttaatagcat agaatctgca caacagtaca atgcaactac tatcagtaca
     5041 aagtggcaaa atattttaaa ctaagtcaaa agaaaaaagc attttcctag aatcatctat
     5101 ttaacaaaca acgttcatac gaacttacat gtttagttaa atgacatagg aaaacgcttt
     5161 tttttataaa aataaaggtg aagtacattt atataagacg aacaaattgg tcccattgtt
     5221 taattaacga cgctttacta tattgttgcg cttttgccaa actacctttt gacagtcgtt
     5281 gctgtacttc aggatgatca atcacatatt ttactttatc aaatagggca tcttcatcat
     5341 ttttagtaat taaataacca ttgaaatcag gcgtaattaa ttcgttaggt ccatatttaa
     5401 tatcataact aataactgga acaccatgtg ctaaagattc aagtagcgct aaagagaaac
     5461 cttccatgtt acttgttatt aaactcaaat aggcatcgct atattcttgg tctagattgc
     5521 ttaaaaagcc gcgtaagtaa acatgatttt ccaatccata tttttgtatc aattcattta
     5581 attttttact ttcagaacca aaaccataca tatgaagctc tatttttggg acatacgata
     5641 ctaagcgttt aattaattca atttgttgat gtaattgttt ttcaggtgaa taacgagcaa
     5701 cggaaattaa tttaacactg cgctgatcta atgtttggac tggtgtatca attgtttcac
     5761 tatagccgac aggaatatta acaactggaa tagtacggtt aatacgtttt tcaacatcta
     5821 atttttgctg ctcagtagaa acgataattg cacgatatcg agataaattt tcaaacatcg
     5881 ctttatatac atttttaaat ggcgatgaat ctaatgcatc aatattttta atgtgtgtac
     5941 tgtgaagcac agctactact gggattgact caggcgttaa gttgaaaata ggtgctgtgt
     6001 acacattacg gtcactgaaa aataaatccc catgttgata tagttgttta atgaaaaatg
     6061 cgcctaattc cgtttcatta ttaaagaaat attgtttgtt agcatagtaa acaataattt
     6121 tttgtacttc tggtttgcca tctttgtaag aaaaatactt ttctaatttt gtgtcacctt
     6181 ctggattata gaaaaattca cataatgttt gttgtttatc aacaagaatc ctactacaac
     6241 ttaaaaagcc acgcacatca taaaaatcac gttttacttt tcgtctttga ctatcaaaat
     6301 gattcacata atctaatata cgatatttag gatcttgaaa atgggcatac attaagaaac
     6361 gctcttgatc atatattcta aagtcatgac tattttcaac atgttttaaa gtataatgac
     6421 attcatcagt ccaatacgac aaccagtcaa atggttcatt gcgttctaaa tatgttgctt
     6481 cttggaagaa atcatacata ttaatatagt cagaactagt aatataattt tgggcatttc
     6541 tatataaata tctattccat gacagaaata cacattgcgc tggtcttccc atttctttaa
     6601 ataaatttaa acgattaata attgctttct ctatcccagt taaattaaca cctaaactat
     6661 tacctacaaa ataattcatt tacaacacca cttatatcta ttttttataa ttatatcaca
     6721 taatatttaa ttacttcttt taactggaag atgtgtttat ttataaaaca acaagttttg
     6781 atatttataa tggtagtagt tattcagtca actacgacca atatatcatt gtagagttta
     6841 ggaaattgat ttatgactca ggcacatcaa atgagaagat ttataaaaga gatatacaac
     6901 tctagaaggt ataataaaaa cgcgcaacta ctgttacgcg tttgaattaa tcatatgata
     6961 ttatttgcga tactttaatt tagcgaaagc atcatgttga tggatagact cttcattacg
     7021 acattcgata tcgaaaccgt ctaaccaatc aaattcaact aagtccgcgg caattaaacg
     7081 aattaagtct tcgacaaaac gtggattttc atatgcacgc tctgtcacac gtttttcatc
     7141 aggacgtttt aaaatagggt atagaattga acttgcatta gcttccattg catctaaaat
     7201 tttattttta tagtcatcaa ctatgtcttg atctttatta atatatgttt taacagtgac
     7261 aacaccacgt tggttgtgcg ctgaatactc acttatttct tttgaacaag ggcatagcgt
     7321 tgtgacagtt gcttcaatag taagttcttt acgtgtaact ttatcaccgt caattgctaa
     7381 tccataagtg acatcggcat taccaactgc tttaatattt gtggttggac tatagcgatc
     7441 aaagaaccat ttcccagaaa catcaacgcc tgccgcattt tgtttcatat tcgtttgtaa
     7501 agtgcgtaac acctgataaa gtgtattaaa ttcaagttca ataccattat catagtgctt
     7561 ttcaacactt tcaattatac ggctcatatt aatacctttt tcgtcttttg ttaaacttgt
     7621 tgaaaaacta aatgtgccag ctgtttgata ctggtcaaca agtacagggt acactaagtt
     7681 tttaatacca acttcttcta tttcaaataa aaaatcttta tgtgtacttt gtaagtctgt
     7741 catttcgttc ttagtagtag gtttcgtgcc ttcaatagga tctacggaac caaagtgttt
     7801 ccaacgacct tctcgtgtcg ataaatcaaa ttcagtcatt tttttcctcc gttaagattt
     7861 aaagtgatat gtccaatatg gttcgactgt taaaaagctg tgttgtttac catcgatttc
     7921 aggacttgct aattgtttta aaaatggacc tgtttgagaa gcatgtgctt caaatgcctt
     7981 aattttaagt tctttaaaat ctgtaatatc attttgaata tcaggttctc caagagcttc
     8041 ggttgcatca ttactgaacg caactaaagt taaacgaggg cgttcttctt taggcatgcg
     8101 ttcaaccgtt cgaattacag cgtctgctgt tgcttcgtga tcaggatgta ctgcatatcc
     8161 aggataaaat gaaataatca atgatggatt tgtatcatcg attaaagatt taatcatacc
     8221 atctatatgt tcgtagggtt caaattcgac agttttgtca cgtaaaccca tttttcttaa
     8281 atcagtaata ccaataactt tacaagcttc ttctagttca cgctcacgaa tacttggtaa
     8341 tgattcgcgt gttgcaaatg ggggattacc taaatttctg cccatttgtc ctagggttaa
     8401 acatgcatat gttacaggta tgcctttttg gatataactt gctaatgtgc ctgcagatga
     8461 gaaggtttca tcatcaggat gtggaaatat tactaataca tgtctttcgt cagtcatgtt
     8521 gatgcctcct ctataaatta aatggtcgct cactaatttg aagtgctgca gcgagttgac
     8581 cttcgtaatt aaaacctgca attaaaaatt catcatgttc attgacctca aaatgcgtta
     8641 gaccttgtac ataaacccaa ccaccatttg atagtttaag accaatgcga taaggttctt
     8701 tattaccacc ttttagttgt gcatgcgtat atgttatttg tatgtttctt aaaaaagtac
     8761 cagcattaaa aacacgttga tcgaaatggt tcgcataggc cccatttgtc gtttcaacat
     8821 gcagatacac aggtttatgt tcaaaagaag caagtaaatc tataacttct tgttctttaa
     8881 ttggttccaa cacgttcact ccttacacta tcaatgtgtt tatctttcta ttttactaaa
     8941 aactattcga taattgtata cgattgctca attatttata aattaatttt catgaagggt
     9001 aattactcag gattacgtaa tcatacagca ttcgtttttt acttttaaaa atcaaaaatt
     9061 tgttggaatt tgaaaagtgt taaacattaa aaatgatgct atattaatgg tgtatgaatg
     9121 aattcataag tttttaaaat gtattaaatt tgtggaggca tgtaaacaat gaaagtatta
     9181 aacttaggat cgaaaaaaca agcatcattc tatgttgcat gtgagttata taaagagatg
     9241 gcatttaatc agcactgtaa actaggttta gcaactggtg gtacaatgac agatttgtat
     9301 gaacaacttg ttaagttatt aaataaaaat cagttaaacg tagataatgt atccacgttt
     9361 aatttagacg aatatgtagg tttaaccgca tcacatccgc aaagttatca ctattatatg
     9421 gatgacatgc ttttcaaaca atatccttat tttaatagaa agaacattca tattccaaat
     9481 ggagatgccg atgatatgaa tgcggaagcg tcaaaatata atgacgtttt agaacaacaa
     9541 ggtcaacgtg atattcaaat tttaggtatt ggagaaaatg gtcatattgg atttaatgaa
     9601 cctggtacgc cgtttgatag cgttactcat atcgttgatt tgactgaaag tactattaag
     9661 gctaatagtc gatattttaa aaacgaagat gatgttccaa agcaagccat ttcgatggga
     9721 cttgctaata ttcttcaagc caaacgtatc attttactcg catttggtga aaagaaacgt
     9781 gctgctatta cacatttatt aaatcaggaa atttctgttg atgttccagc cacattactt
     9841 cacaaacacc cgaatgttga gatatattta gacgacgaag cttgcccgaa aaatgttgcg
     9901 aaaattcatg tcgatgaaat ggattgattg caatgtttaa ttaagaaatg cctcgggaaa
     9961 ggttccaata gaaagataaa aagcattgga aggatgattt ttagtggaat tacaattagc
    10021 aattgattta ttaaacaaag aagacgcggc tgagttagca aataaagtaa aagattatgt
    10081 agatatcgta gaaatcggta cgccaatcat ttacaacgaa ggtttaccag cagttaaaca
    10141 tatggcagac aacattagta atgtaaaagt attagcagac atgaaaatta tggatgcagc
    10201 tgattatgaa gttagccaag caattaaatt tggcgcggat gtaattacaa tactaggtgt
    10261 tgcagaagat gcatcaatta aagcagctat tgaagaagct cataaaaata ataaacaatt
    10321 actagttgat atgattgctg ttcaagattt agaaaaacgt gcaaaagaac tagatgaaat
    10381 gggtgcggat tatattgcag tacacactgg ttatgattta caagcagaag ggcaatcacc
    10441 attagaaagt ttaagaaccg ttaaatctgt tattaaaaat tctaaagttg cagtagcagg
    10501 tggaattaaa ccagatacaa ttaaagaaat tgtcgctgaa agtcctgatc ttgttattgt
    10561 tggtggcgga atcgcaaatg cagatgatcc agtagaagct gcaaaacaat gtcgcgctgc
    10621 aatcgaaggt aagtaatatg gctgaattta gtgactatca attaattcta gatgaattaa
    10681 agatgacttt gtcacatgtt gaagcggatg aattttcaac gtttgcgtcc aaaatactac
    10741 atgctaaaca tatatttgta gctggcaaag gacgttcagg attcgtggcg aatagctttg
    10801 caatgcgctt aaatcagctc ggcaaacagg cacatgttgt tggagaatca acgacacctg
    10861 cgattaagtc gaatgatgta tttgtaatta tctctggttc aggttccacg gaacatttaa
    10921 gattattagc agacaaagca aaatcagtag gtgctgacat cgtattaatt actacaaata
    10981 aagattctgc aataggcaat ctagctggga cgaacatcgt tttgcctgca ggtacaaaat
    11041 atgatgaaca aggctcggca caaccattag gaagtttgtt tgaacaagca tctcaattat
    11101 ttttagatag tgttgtaatg ggattgatga ctgaaatgaa tgtaacggaa caaacgatgc
    11161 aacaaaatca tgctaattta gaataaaaca
//
LOCUS       DAKPJH010000084        10717 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.084, whole genome shotgun sequence.
ACCESSION   DAKPJH010000084 DAKPJH010000000
VERSION     DAKPJH010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10717
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.084"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(199..287)
                     /locus_tag="OY092_001933"
     tRNA            complement(199..287)
                     /locus_tag="OY092_001933"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(250..252),aa:Ser,seq:gga)
     gene            complement(342..413)
                     /locus_tag="OY092_001934"
     tRNA            complement(342..413)
                     /locus_tag="OY092_001934"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(378..380),aa:Glu,seq:ttc)
     gene            complement(415..489)
                     /locus_tag="OY092_001935"
     tRNA            complement(415..489)
                     /locus_tag="OY092_001935"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(455..457),aa:Asn,seq:gtt)
     gene            complement(504..577)
                     /locus_tag="OY092_001936"
     tRNA            complement(504..577)
                     /locus_tag="OY092_001936"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(543..545),aa:Gly,seq:tcc)
     gene            complement(593..668)
                     /locus_tag="OY092_001937"
     tRNA            complement(593..668)
                     /locus_tag="OY092_001937"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(633..635),aa:His,seq:gtg)
     gene            complement(682..754)
                     /locus_tag="OY092_001938"
     tRNA            complement(682..754)
                     /locus_tag="OY092_001938"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(719..721),aa:Phe,seq:gaa)
     gene            complement(771..846)
                     /locus_tag="OY092_001939"
     tRNA            complement(771..846)
                     /locus_tag="OY092_001939"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(811..813),aa:Asp,seq:gtc)
     gene            complement(868..941)
                     /locus_tag="OY092_001940"
     tRNA            complement(868..941)
                     /locus_tag="OY092_001940"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(905..907),aa:Met,seq:cat)
     gene            complement(1334..1888)
                     /locus_tag="OY092_001941"
     CDS             complement(1334..1888)
                     /locus_tag="OY092_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HCX1076873.1"
                     /translation="MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAK
                     TVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAEN
                     IDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG
                     HFLEEDGFETFTALQDRMQDYMTR"
     gene            complement(2211..3611)
                     /locus_tag="OY092_001942"
     CDS             complement(2211..3611)
                     /locus_tag="OY092_001942"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HCX1076874.1"
                     /translation="MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQ
                     SYRKDGYMIELGPESYLGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGG
                     SIMGIPTDIKPFVTTKLISPLGKLRAGLDLLKKPTQMQNGDISVGAFFRARLGNEVLE
                     NLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGA
                     PKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYKIVYSNQQEEVF
                     DGILVTTPHQVFLNWFGQDPAFDYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIAR
                     TSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQM
                     MTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPD
                     CITQGKVAAEEVIAEL"
     gene            complement(3635..4558)
                     /gene="hemH"
                     /locus_tag="OY092_001943"
     CDS             complement(3635..4558)
                     /gene="hemH"
                     /locus_tag="OY092_001943"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HCX1076875.1"
                     /translation="MTKKMGLLVMAYGTPYKESDIEPYYTDIRHGKRPSEEELQDLKD
                     RYEFIGGLSPLAGTTDDQADALVSALNKAYADVEFKLYLGLKHISPFIEDAVEQMHND
                     GITEAITVVLAPHYSSFSVGSYDKRADEEAAKYGIQLTHVKHYYEQPKFIEYWTNKVN
                     ETLAQIPEEEHKDTVLVVSAHSLPKGLIEKNNDPYPQELEHTALLIKEQSNIEHIAIG
                     WQSEGNTGTPWLGPDVQDLTRDLYEKHQYKNFIYTPVGFVCEHLEVLYDNDYECKVVC
                     DDIGANYYRPKMPNTHPLFIGAIVDEIKSIF"
     gene            complement(4616..5653)
                     /gene="hemE"
                     /locus_tag="OY092_001944"
     CDS             complement(4616..5653)
                     /gene="hemE"
                     /locus_tag="OY092_001944"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HCX1076876.1"
                     /translation="MVHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYS
                     LFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPI
                     KTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSK
                     NYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYR
                     RYIKPHMIRLISEVKEKHDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQL
                     GVTKTLQGNLDPSILLAPWNVIEERLKSILDQGMENGKHIFNLGHGVFPEVQPETLRK
                     VSEFVHTYTQR"
     gene            complement(5643..5750)
                     /locus_tag="OY092_001945"
                     /pseudo
     CDS             complement(5643..5750)
                     /locus_tag="OY092_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500462.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5915..6418
                     /gene="traP"
                     /locus_tag="OY092_001946"
     CDS             5915..6418
                     /gene="traP"
                     /locus_tag="OY092_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein TRAP"
                     /protein_id="HCX1076877.1"
                     /translation="MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTTDSSVIFEETEEN
                     TVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHVYQLEKKLISVDDNFKNFGGFKS
                     YRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
                     YLYPIKE"
     gene            complement(6542..7765)
                     /locus_tag="OY092_001947"
     CDS             complement(6542..7765)
                     /locus_tag="OY092_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076878.1"
                     /translation="MRNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFI
                     FGYGEWLKHIPTNINFALIAAVIVALTSIFPMRPLLKEADKIFLLPFEKHMSQFMRHA
                     ILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGVSALIFPYVGLRIRWQWYQS
                     GLKTWQVNLISFIIFALTYYLLLAPKWYIAFVMVALPVLIEFLVKKYKPGFLYPWEKM
                     IAIEHRHHMNYYKFVNMFTDVKHLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIR
                     SFIRGRDAFNIIFRLVIIAVLLMLWLSYPLVTAIIGCLFVYIILLQMAQFYSQQAYGL
                     WPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVAFIIKHMTLFYVVLIFYIVGLLTIR
                     SIIKKLKYQETLLRD"
     gene            complement(7758..8498)
                     /locus_tag="OY092_001948"
     CDS             complement(7758..8498)
                     /locus_tag="OY092_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076879.1"
                     /translation="MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTT
                     IKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYIPESPVIYEELTLEEHIEMTAMA
                     YDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
                     FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLE
                     ALRQQTGLHNQTLDDIYIHVTQGGDVHA"
     gene            8632..9054
                     /locus_tag="OY092_001949"
     CDS             8632..9054
                     /locus_tag="OY092_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HCX1076880.1"
                     /translation="MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPK
                     KASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHL
                     IPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF"
     gene            9196..9561
                     /locus_tag="OY092_001950"
     CDS             9196..9561
                     /locus_tag="OY092_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HCX1076881.1"
                     /translation="MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSK
                     SELQREFETIKQSFNDILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQ
                     SHIENLQNRGEDIGNEISK"
     gene            10294..>10717
                     /locus_tag="OY092_001951"
     CDS             10294..>10717
                     /locus_tag="OY092_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HCX1076882.1"
                     /translation="MFLCKRQIDINARFGLPRIAFMSAVATIIMFLVSYEVMYFLSNT
                     PLSDRHFLIFLLLVFMTYPLHKSIHLLFFLPYRKSFKVHKLTKRKWLIFYNTYVNQPV
                     HKFYFCINLILPLIILSAMFVYLTISFPQYGHYFMFLLA"
BASE COUNT         3492 a         1989 c         1552 g         3684 t
ORIGIN      
        1 acaaattttt ttcttaataa actgaaaaat tctgttttta atctttaaat attcactaat
       61 attattagat tacgatttta aacttaacaa tcctacttac tattgaacaa acaaatttta
      121 aattaagtga ctcagataat agacaaaaaa ccttaaaaat agcgcttaaa atgggtaaaa
      181 ccattttaag cgcctttacg gagagtgagg gattcgaacc ctcgagacgc ttgtggcgcc
      241 tacacacttt ccaggcgtgc tccttcggcc aactcggaca actctcctca acaataaata
      301 tgtaataaaa aaacagaagc gatatttcac ttctgtttgt atgactccta cgggactcga
      361 acccgtgtta ccgccgtgaa agggcggtgt cttaaccgct tgaccaagga gccatggctc
      421 cacaggtagg actcgaacct acgaccgatc ggttaacagc cgatagctct accactgagc
      481 tactgtggaa taatagaaaa taatggagcg ggtgatggga atcgaaccca caacatcagc
      541 ttggaaggct gaggttttgc cattaaacta cacccgctaa tgtaaacgat tatggggcgg
      601 ctgaagggga tcgaaccctc gaatgtcgga accacaatcc gatgtgttaa ccacttcacc
      661 acaaccgcca tgaattaaga atggttcagg acagagtcga actgccgaca catggagctt
      721 caatccattg ctctaccaac tgagctactg aaccgtaatg gtaataataa tggcggtctc
      781 gacgggaatc gaacccgcga tctcctgcgt gacaggcagg cgtgttaacc gctacactac
      841 gagacctatt aaattaaaaa ctatgtattg cgggaggcgg atttgaacca ccgaccttcg
      901 ggttatgagc ccgacgagct accgaactgc tccatcccgc gctaatatta ttttgaatta
      961 cctaattaat ataccataat caaaaaccta aagtcaagaa ctttttgaat ttaatttaaa
     1021 tgttatctct taaataatta cttaaatatc gtagcaacat gttctctgtt gaacacaaat
     1081 attagtatat tcatttttgt agtgtacgtc aacgacattt tcaaagtttt ttgtgtaaaa
     1141 aaacgcttct tcttcccttt tataatataa gtgtctaata gttgtcataa ttactcatga
     1201 actattgaaa aagatgtagg aatcataaat tttataatgc ctacacctct aaactattaa
     1261 aatataatta taatcttttt cactaaagta ctatgcttcg tactgacaca acataacaca
     1321 acccatacac taactatcgt gtcatgtaat cttgcatccg atcttgcaac gctgtaaatg
     1381 tttcgaagcc atcctcttct aagaagtgcc ctccatcttc cacgattcgc aagttcccct
     1441 ctaatgcatt cattaaacgc tgggtttctt tatatgaaac gtatttgtca tttttagaac
     1501 tcaatccgta aaaattgtca actttctttt taatattatc gtaatcaatg gttacattac
     1561 ttaaatcaat atctaaatct atattttctg catcttcttt aaagcccgct atactaaaaa
     1621 agccttcaat cggctgatca atcatttcaa tatattttaa agctgtgatt gaacctaaac
     1681 catgtgttac aaaatatgta tcctttttgc gtacattaat ttgtttcgtc atagcttcaa
     1741 tccactgatc cactgtcttc gcttcagggg attcaaaatt aaataatgtt acgtcatatc
     1801 cttctaaagt taagttatgc tccaaccact gataccaatg atttctacta tttccatgca
     1861 tagaatgtac aataattaca tctgtcatct cattctctcc tttcaactta ctacttcttt
     1921 tctattttta aaaaaatgac tgattaccta taattgtaaa ataaaaacac cttaattaga
     1981 aatgttatat cgcaaagtga catttctaat taaagtgtat tgacatcatt tcaatatcat
     2041 taaaaaacag ctaaaccttt gtctctgctt caatttcaca aaattaattc ccgctgaaag
     2101 tatctatatt tacacattac ttccaccatt atataactta aaaatgacta tatttcatca
     2161 aacattatct aaaggcgtcg cacctacacc aacaccatcc aacaattaac ttacaactct
     2221 gcgattactt cttcagcagc aactttacct tgcgtaatac aatcaggtag tccaaccgct
     2281 tcaaaagatg caccagttac tctaagtcgt ggatatgttt gtttaatatg tgcttgaatc
     2341 tgtctaattt gttgaatatg accgacatgg tactgtggca tacttttcgg caaacgattg
     2401 acaattgtaa attcaggatc acctttaaat gtcatcattt gacttaaatc tctacgtaca
     2461 atcgatacta attcattatc tgtatgatca tcaaccacag tatcacctgg tttacctaca
     2521 tacgcacgaa tcaaaacctt accttctggt gtagtaaatg gccatttttt cgatgtccaa
     2581 gtacatgcgg taatgtctgt atcactcgtt ctcgcaatca caaagccagt accatcataa
     2641 gtattttcaa tgtctttttc atcaaatgcc aatacaacag ttgcaacagt cgtactatcc
     2701 atcgttttaa agtaatcaaa tgctggatct tgcccgaacc aattcaaaaa gacttgatgt
     2761 ggtgttgtca ctaatattcc atcgaatact tcttcttgtt gattactgta aacaatttta
     2821 tattgctttt gagatgtaat aatatcatcc actgacgtat tgtagcgtat tgtcacacct
     2881 ttatttttca catcttgttc taatgcttca ataaatgagc ttaaaccatg cttaaattgt
     2941 ttgaattgtc cttttggtgc gccaggatat aattgtcttt gtttcagacg cttatttttc
     3001 tcatccttca taccttttat cagacttccg aatgcctctt ctttttcttt aaaattagga
     3061 aacgtactca tcaaacttaa tttatcaata tcggtaccat aaataccacc cattaaaggc
     3121 tcaattaaat tctcaagtac ctcattacct aatcttgctc tgaaaaatgc accaacagaa
     3181 atgtcaccat tctgcatttg agtaggtttt ttaagtaaat ctaaccctgc tcttaacttt
     3241 ccaagtggtg aaattaattt agttgtcaca aacggtttga tatctgtcgg aattcccata
     3301 attgatccac ctggaatagg atacaatttg tttttcgcaa aaatataaga ttgtccagtc
     3361 gtatttgtaa caatatcttg ttctaatcca atatctttcg ctaattctgt cataatcgtt
     3421 tttctaccta aataagattc aggccctagt tcaatcatat aaccatcttt acgatacgat
     3481 tgaatctttc cccccggacg attcgatgct tcaaagatgg ttacatcaat attaggatct
     3541 tgctgtttta aaaaatatgc acttgataaa cctgttatcc ccgctcctat aatagccact
     3601 gatttagtca caacgtttca cgcttctttc gtcattaaaa tatagacttg atttcatcaa
     3661 caattgcacc gataaataat ggatgtgtat tcggcatttt tggacgataa taattcgcac
     3721 caatatcatc gcaaacaact ttacattcat aatcattgtc ataaagcacc tctaaatgct
     3781 cacatacaaa acctactggc gtatatataa agtttttata ctgatgtttt tcatataaat
     3841 cacgtgttaa atcttgtaca tctggcccta accaaggtgt acctgtatta ccttcagatt
     3901 gccaaccaat cgcgatatgt tcaatattag attgttcttt aattaaaagt gcagtatgtt
     3961 ctagttcttg tggatatgga tcattattct tttcgattaa accttttggc aaactatgag
     4021 ccgaaacaac taataccgtg tctttatgtt cctcttccgg tatttgagct aatgtttcgt
     4081 tgactttatt cgtccaatat tcaataaatt taggttgttc ataataatgt ttcacatgtg
     4141 taagttgaat accatatttt gcagcttctt catcagcacg tttgtcatat gatcctactg
     4201 aaaatgaaga atagtgtggt gctagtacta cagtgattgc ttcagtaatg ccatcattgt
     4261 gcatttgttc aaccgcatct tcgataaatg gcgaaatatg ttttaatcct aaatatagtt
     4321 taaattcaac atctgcatat gctttattta atgctgaaac tagcgcatca gcttggtcat
     4381 ctgttgtacc tgctaatggt gataaaccac ctataaattc atatctatct ttcaaatctt
     4441 gaagttcttc ttcagatgga cgtttaccat gtctaatatc tgtataatat ggctctatgt
     4501 cactttcttt ataaggtgtg ccataagcca taactaataa tcccattttt ttagtcattg
     4561 ataatacctt cctttaaatg aattatcttt catgtgcttc aatgtaatac tatgattatc
     4621 tttgtgtata tgtgtgtacg aattcgctta ctttacgtaa cgtctctggt tgcacttctg
     4681 ggaaaacacc gtgtcctaaa ttaaagatgt gtttaccgtt ctccatacct tgatctaata
     4741 ttgacttcaa tctctcttca atgacattcc atggtgctaa taaaattgat ggatctaaat
     4801 tcccttgtaa tgttttagta acacctaatt gctgtgcctg attaatcgac gttctccaat
     4861 ctaggcctaa tacatcaatt ggcaaatcat tccattcatt gattaaatga ctggcaccta
     4921 caccgaataa aattaccggc acatcatgtt tttctttaac ctcactgatt aatcgaatca
     4981 tatgtggttt aatgtaacgt ctgtaatcct cgacatttaa tgcacctacc catgaatcga
     5041 aaatttgaat caattcggca cctgcttcga cttgagctgt tacatattta acagatacat
     5101 caactaaatg attcattaaa gcaaaccatg ttgcttcatc tctatacatc atcgcttttg
     5161 taaaattgta atttttcgat ggtccgcctt caatcatata tgacgctaat gtaaatggtg
     5221 ccccagtaaa tcctattagc ggcacattta acttttcttc tgttaaaagt ttaattgtat
     5281 ctaatacata tggtacatct cgttcggggt ctatttgaga aagtttctca acatcttgaa
     5341 ttgttttgat aggattatga atcactggac caatacccga tttaatttct acatcgacac
     5401 caattggctt taatggtgtc ataatatctt tgtataaaat tgctgcatct gtatgataat
     5461 tatcaactgg taaatgtgtt acataagcgc acaactccgg ctgatgtgta atatcgaata
     5521 gtgaatattt ttctttcaat tttcgatatt ctggttgcga acggccagct tgtcgcataa
     5581 accaaacagg tgtatgtgtc gtttcttcac ctttaatcat tttcaaaatt gtattgtttt
     5641 tattatgcac cataaaggcc tcctaaatta aaatcattct tatctatatt atcatatcgc
     5701 tcattcgttc gtattttcaa taaataaatg tcataaaact gacattaaat tacacatcat
     5761 ttgtttgtgt atttaaattt taaaatcttg atggattatc tccatatctt tttgtcttgc
     5821 atgatttatt atagtaactt taaccgtata ttaatagtgg taatgactag tttatcgtcg
     5881 tataataaat aaaaacataa gggggacctt tcatatgaag aaattatata catcttatgg
     5941 cacatatgga tttttaaatc agataaaaat caataatcca tctcatcatt tattccaatt
     6001 ttcaactact gattcatcgg tgatttttga agagactgaa gaaaatacag tactgaaatc
     6061 accttcaata tatgaagtta ttaaagaaat aggcgcattc aatgaagatc atttttattg
     6121 cgcaattttt attccgtcaa ctgaagacca tgtttatcaa cttgaaaaga aattaatcag
     6181 tgttgatgac aatttcaaaa actttggtgg ctttaaaagt tatcgattgc tgagacctgt
     6241 taaaggtaca acatacaaaa tttactttgg ctttgctgat cgacaaactt atgaagactt
     6301 taaaaattct gatgctttta aagatcattt ttcaaaagaa gcattaagtc attactttgg
     6361 ttcaagcgga caacattcaa gttattttga aagatattta tacccaataa aagaatagat
     6421 tcgaagaaaa cttccattgg ttatgctgtt aacgtataga tgctaatgta atctgaacgc
     6481 cgtatcattt ggcgttcaac attacatgca cctttacaac atacatgcca atggaagttt
     6541 tttagtctcg taataatgtt tcctgatatt ttaacttttt aataatactt ctaatcgtta
     6601 ataaacctac aatatagaaa atgagtacaa catagaataa cgtcatatgt tttataataa
     6661 atgccactgc aaacacagta caaataacaa acattaatct atataaaaac tgttcatacc
     6721 ctttgattac cttctcttca ggtacgggcc acacttgagg ccataagcca tatgcttgct
     6781 gtgaataaaa ttgtgccatt tgtaacaata taatatatac aaataaacac ccaataattg
     6841 ctgtcactaa tggatatgat aaccaaagca taagtaaaac tgcaataatt actaacctaa
     6901 agataatatt aaatgcgtct ctccctctta taaagcttct aataaataag aataaataca
     6961 tcgcattaga gttaaattta ctaccctttg gaactggtaa aagtatatct agataacttc
     7021 ttctgactgc agattctttc aaatgtttta catcggtgaa catattaaca aatttataat
     7081 aattcatatg atgtcgatgt tcgatagcaa tcattttctc ccaaggatat aaaaagccag
     7141 gtttatattt tttaactaaa aattctatta acacaggcaa agcaaccatc acaaatgcga
     7201 tgtaccattt tggagctaac agtaagtaat atgttagagc aaagatgatg aatgatatta
     7261 aattaacttg ccatgtttta agtcccgatt gataccattg ccatcttatg cgtaaaccaa
     7321 catatggaaa aattaatgca ctgactccaa aacaaatgta aaatgccaca ttatgttgat
     7381 taatattata aaacaacggg aacatcacaa taacaataat gagttggatt aatatgcgcg
     7441 caaagtaact atataaaatc gcatgacgca taaattgaga catgtgtttt tcaaatggta
     7501 ataaaaagat tttatccgct tcttttagga gtggtcgcat tggaaaaatg gatgtcaacg
     7561 caacaatcac tgctgctatt aatgcaaaat tgatattcgt tggaatgtgt tttaaccatt
     7621 cgccatatcc aaaaataaat gcacccagca aaataagtaa aaagaccatg aaatgaccat
     7681 taaatataaa cttattataa taatttttct ctttacgaag ggcatgtaat cttttattaa
     7741 ataaagtggt cgcttggtta cgcatgtaca tctccacctt gcgtcacatg aatatatata
     7801 tcgtctaatg tttgattatg taagccagtt tgttgtctca atgcttctaa atctccaaat
     7861 gcaacgactt caccttcgtc tagtatgata aaacgatcac agtaacgttc agctgttgct
     7921 aaaatatgtg tactcattag aacggttcta ccttcgtttt tcttttcaac cattaaatct
     7981 aacatggatt gaattcctaa tggatctagg ccaaggaatg gttcgtctat aatatacaat
     8041 tcgggattaa cgataaacgc acaaataatc atgacttttt gtttcatccc cttagaaaaa
     8101 tgactcggaa aaactttcaa ttcattttct aaacggaatg tctttaataa tggcattgct
     8161 cgattcatcg cttcatcacg atcaatatca tatgccattg ctgtcatctc aatgtgttcc
     8221 tctaatgtga gttcttcata aataaccggt gattccggaa tataagataa ctttcttcta
     8281 taagcctcta tgtcatcatt aatgttgata tctgaaattg atagagatcc ttccataggt
     8341 gtaagcaatc ctagcatatg tttaatcgtt gtactcttac cagcgccatt aaggccaata
     8401 agtccaacaa tttcgccttt gtttaattca aaatttatat ctttaattac agggcgtttt
     8461 ccatatccac ctgtaagctg ttctacttta actgtcataa ggcacctcca tgacttatat
     8521 tgtaccaaaa attataaaat gctcatatta aatacacatg tcctaatatc gaatttttag
     8581 cgacaatgtt ataatgaatg gtaatactag ttgaaaagga gtgtagtcat catgtcagaa
     8641 acaattttcg gcaaaatttt aactggagaa attcctagct ttaaagtata tgaagacgat
     8701 tatgtctatg cctttttaga tatatcacaa gttactaaag gacatacgtt attaattcct
     8761 aaaaaagctt ctgctaatat ctttgaaact gatgaagaaa caatgaaaca tatcggtgca
     8821 gcattaccta aagtagcaaa tgctattaag cgtgcattta atcctgatgg tttaaacatt
     8881 attcaaaata atggtgagtt tgcagatcaa tctgtatttc atattcattt ccacttaatt
     8941 cctcgatatg aaaatgatat tgatggattt ggttataagt gggaaacaca tgaagacatt
     9001 ttagataacg atgcaaaaca acaaattgct gaacaaattc aagcacaatt ttaaatgtat
     9061 gcttaatcta agctcgaacg ggtataatat gattaatatt ataacaattg cgtttgaagt
     9121 gataacatca aggttagcaa ttttaaacaa aatgagttat caagataaca gatgataaaa
     9181 gtgaggagaa tataaatgaa agcatcacgc attctattcg gtatcggtgt tggtgtagca
     9241 gctggttttg tagttgcact tcaaggacga gacgacaaaa gtgtcaagaa caacacgatc
     9301 gatcgtactg cccctactgg ttcaaaatca gaactacaac gtgaatttga aacgattaaa
     9361 caaagtttta atgacatttt aaactatggt gttcaaatta aaaacgaaag tgcggaattt
     9421 ggtagttcaa ttggtggtga aattaagtca ttacttggaa acttcaaatc tgacatcaat
     9481 cctaatattg aacgtttaca gtcacacatc gaaaatttac aaaatcgtgg cgaggatatt
     9541 ggaaacgaaa tttctaagta gcaggttacg ttctcgatca caactatttt tattagtaac
     9601 tgcatattta ttttttaaat ttaaatgcca aataaacgag atgacattag aaattagata
     9661 tttcttgtca tctctttttt atggctcgaa tgaacatttg attacaaatt acaggaatac
     9721 attgtttgta gtgattttcg cttaaatcat atttataaat tgattgaaaa cattgcttag
     9781 gattcattgt gttatccttg cactttgatt acgctttact taaatcatta tcgacaaaca
     9841 acatacttat attttcattg agccgaacct tatatataca ttacatatac cttacttgca
     9901 caaattatta atctggtgtt tgttataatt acatatcact atatttttag catttgtatg
     9961 acttaattgg tcaaaagatg cttttgcata tgccctgcca tatccatttt ttatattatt
    10021 caagttttca aatactcatg tcacacgcgc ctttttcata agtgatgctt tattagcaag
    10081 aatatgtgtt cgcagaaatt tgttctgcat tctacttcta cgctagtcaa tcagccaatt
    10141 ttaccaatcc ccactttcgc gtttcaaatc aaacaatacg tcgcccctta cttcatatat
    10201 aacaattctt ctaacatgat atgttactat tgaattactg aacctgagtt agttataatc
    10261 taacttatat tgaaaagaga tgaggcgtaa gatatgtttc tatgtaaaag acaaattgat
    10321 atcaatgcac gatttggttt gcctagaatt gcatttatga gtgcagttgc aaccatcatt
    10381 atgtttttag ttagttatga agtaatgtat tttttatcta atacgccatt atcagataga
    10441 cattttctca tctttttatt acttgtattt atgacgtatc cattacataa aagtatacat
    10501 ttattatttt tcttaccata tagaaaatcg tttaaagttc ataagttgac taaaagaaaa
    10561 tggcttatat tctataatac ctacgtcaat caacctgtac acaaatttta tttttgcatt
    10621 aacttaatat tgccgttaat tatcttatct gcaatgttcg tttatctaac aatttcattt
    10681 ccgcaatatg gacattattt tatgttctta ttggcat
//
LOCUS       DAKPJH010000085        10564 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.085, whole genome shotgun sequence.
ACCESSION   DAKPJH010000085 DAKPJH010000000
VERSION     DAKPJH010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10564
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.085"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..849
                     /locus_tag="OY092_001952"
     CDS             1..849
                     /locus_tag="OY092_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016912712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1076883.1"
                     /translation="MLKSFLVTSETKNLTKASELLNYSQSTVSTHIEKLERQLDVKLF
                     YRKKYGMELTEEGLAYVKYAKVILDSNSEYEREIKGLYNKKVNISINMQESQYLYRYY
                     NKISEWLAEHPYVNLKFKSAHSNFYIKEEIANFKSDISLITDEKIINSNLTAIPITEE
                     RLIFVTNKEMKDFKLNDIQNHTLLVTEKGCSYREQLEKILYKYSFSTKQMIEFLGIES
                     LKKHLKNSDGIALLPEFIVADELQNKSLFQIDVDVDIPNLETTLIINPESSKQVLESF
                     VKDVFL"
     gene            complement(1203..1736)
                     /locus_tag="OY092_001953"
     CDS             complement(1203..1736)
                     /locus_tag="OY092_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4865 family protein"
                     /protein_id="HCX1076884.1"
                     /translation="MHAMQYHVKLPSDYNMEIIRDRVRLNGYKTDGFKNLIIKAYLIS
                     QTTSNCITNTYSPLYLWRSSEGMTEFIFNGFYDNVISSFGWQNINIGVIYSMNITDSV
                     KHSLYALEEYIDIFPTLSLKEIEIKKLFRIFDNAVAEIIIYNPDKWKFVKYSFIENLP
                     KSLNPNIKIYDVLYISQ"
     gene            1827..2570
                     /locus_tag="OY092_001954"
     CDS             1827..2570
                     /locus_tag="OY092_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1076885.1"
                     /translation="MIKLNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLEN
                     ELGVVLLFRNQKGAKATKAGEEFLAYSKKVLRDTETIKNKMKYNTMSILCSELLFNYL
                     SESEEIMMSNNSINFISSGNIRKAIEKNNYDKVISFIKINDSNYRLSNVDTMKVTLYS
                     NGSNYDKEPLLINKDEFCPLRKITLDIKLDSQRVMEFDSLAAIINLVEQGKGKALLPM
                     TFENKRDIVQDISKIFEVSYYTYNHIMHH"
     gene            complement(2801..3220)
                     /locus_tag="OY092_001955"
     CDS             complement(2801..3220)
                     /locus_tag="OY092_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000039763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HCX1076886.1"
                     /translation="MSKKYILIIIGTIFTIAFIIVGVILIMKYNELMKQKEFYYKQQQ
                     ERITLYLKHNTKEPNTIKSVHFTSLDKGPLDERIIEGYINNNKDDGFVAYMVPAYNHQ
                     FGGDMLRDETVQKLLKPSKDRKSPDQIKKELKEKRSK"
     gene            3764..4366
                     /locus_tag="OY092_001956"
     CDS             3764..4366
                     /locus_tag="OY092_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076887.1"
                     /translation="MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVN
                     KVSETYKFATTFLFLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCF
                     LPFYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQ
                     AGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER"
     gene            4633..7785
                     /locus_tag="OY092_001957"
     CDS             4633..7785
                     /locus_tag="OY092_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA2/NAM7 family helicase"
                     /protein_id="HCX1076888.1"
                     /translation="MSQLLNDTLSAWLLIESLSPGEVNFTAEDILSAEHFKNGAKQAQ
                     LQSFDEYFEIWNAERFIISEEKSETGELIFKFYRHCFRYNEINLKIQDIFDDYSEIHN
                     PNGTHCYGYTFNTDKHGKVIVDSIHIPMIMSALKEIEKNKNANIEEKFNDSVEKFVQK
                     VKEILADEPINEFKLKKMDKAYDEYFSVLNSKKDGLFGHYVAIEYVKDSDLPQPEFNS
                     FFISDIEKARKSPNQTLIDYIEGVEESQRIEVDENKEMFDKFLHPSRLPDGRWPSQTE
                     FRLSLMQQLAVNQITSGNERISSVNGPPGTGKTTLLKDIFAHLVVERGKELAKLNNPK
                     DAFVKTKIHETDDKYVYLLKESIAKYKMVVASSNNGAVENISKDLPKIEEIIRNPEKC
                     KFPKYEQNYANLAHELKDFAEIAEDLIGESAWGLFSGVFGKSTNINQVLSHMLKQDAN
                     DIGFAKLLQNENNRMSYNELMSEWQSHQCAFLEELRHVEMLKEESIRAYDVYKNCESF
                     SKIEQVINSEKTSIEEQIYHLDNETLRDNKEIEDLGDRINYNTKQLETLNELIKSIKE
                     SNKGFINKLKAMFNSEEDESYKDHNKEKQQLLTQQLELEKCKKNKHEDLVSKLKEKEK
                     LIKQLTKVQLQLDELNSQLQELEAYRIESKITIPEKDFWSDNNYDERQVTNLWTSDEL
                     QYRRAMLFLRAMILHKLLLIANNTTIYYAINDFKDRRKLIDANPDKVHNAWNVMHLIF
                     PVVSTTFASFKSMYGGIPKDFIDYLFIDEAGQAIPQAAVGALYRSKKVVAVGDPIQIE
                     PVVTLESHLIDNIRKNYHVPEYLVSKEASVQSVADNANQYGFWKSDATDSNQKTWIGI
                     PLWVHRRCLKPMFTIANQIAYNNKMVLPSNITKVGKTGWYDVKGNAVQKQFVKEHGEK
                     VVGLLADDWIEAIKEGKNEPSSFVISPFSAVQQQIKRMLKQQLPTRIDIERTKINQWV
                     DKSIGTVHTFQGKEAQKVYFVIGTDNTQDGAVNWSCEKPNLLNVAVTRAKKEFYVIGD
                     MQRIQMKPFYETIFKERNVK"
     gene            7860..8342
                     /locus_tag="OY092_001958"
     CDS             7860..8342
                     /locus_tag="OY092_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076889.1"
                     /translation="MKKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLA
                     LVISNIFIHILEPKLSITTQIIIVLILIETLIGLRFLKAYDVKRGKDKENKKNSKDFV
                     KLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK
                     "
     gene            8510..9745
                     /gene="istA"
                     /locus_tag="OY092_001959"
     CDS             8510..9745
                     /gene="istA"
                     /locus_tag="OY092_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HCX1076890.1"
                     /translation="MRHDIYEGVLFYIMKGIKPNYAELGRQYNCDPRTVKKYYEAGKE
                     NELERLKKRQQNKKASKLDPFKEIINKKIELGCTAMAIFKYIEKKGYEGKYTILREYC
                     KNKKQNETKKATIRVETNPGIAAQVDWKEDMVMHDKFGRTYQFNIFLYVLHYSKMKYI
                     TLTWDRKQDTLFECLKDAFEYTEGVPKEIWFDNMRTVVDRPRTQYKKVVFNNLFYQFS
                     KDANFEPIACRPYRPQTKGSVESLAKFVEQRLRPYDYEFYDAVELIGLVNDLCHELNH
                     LEISQATEQRPIDVFNYEEKEHLNSFNAKLLDTYIENECIRIVSKESMINFRKGKYSV
                     PTKYIGEEVQVIFNNSTDELLIYYDGELIRRHNLSERKFNYIVEDMSEILKSDVFKHK
                     DDKEILTYIENSLLLYDEI"
     gene            9757..10524
                     /gene="istB"
                     /locus_tag="OY092_001960"
     CDS             9757..10524
                     /gene="istB"
                     /locus_tag="OY092_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HCX1076891.1"
                     /translation="MNTNHQKLLNNFEILKLKKFKDYYPNYIELLSKNEKSLTEILID
                     LTEKEIEYQSELKFKRAVNSARFPKIKYLHDFDFMFQPSINQQEILTLKSMHFLEDSI
                     NICFLGNSGVGKTHLAISLGIEACKQNIKTRFYTFKELIDLLTVSDSKGIINKTLKQL
                     SRIELLIIDEIGYTPITKEQADLFYQLMSLRYEWKSTIITTNIPFSSWGESFSNKIVS
                     AAIIDRLVHHSKVFKITGESYRLKDYKTEKSLNIRQS"
BASE COUNT         4064 a         1353 c         1736 g         3411 t
ORIGIN      
        1 attttaaaat catttttagt aactagtgaa acaaagaacc ttactaaagc atcagagtta
       61 cttaactatt cacagtcaac tgtatctaca catattgaaa aattagaaag gcaattagat
      121 gttaaattat tttatagaaa aaaatatggt atggaactaa cggaagaagg cttagcatac
      181 gttaaatacg ctaaagtgat tttagatagt aatagcgaat acgagagaga aataaaagga
      241 ctttacaata agaaggtaaa tataagtatt aacatgcaag aaagtcagta tttgtatcgc
      301 tactataata agattagtga atggttagct gaacacccat atgtaaactt gaagtttaaa
      361 tccgcacatt ctaatttcta tattaaagaa gaaattgcta atttcaaatc ggatattagc
      421 cttatcacag acgaaaagat tattaatagt aacttaactg ctattcctat aactgaagaa
      481 cgtttaatat ttgttactaa caaagagatg aaagatttca aattaaacga tattcaaaac
      541 catacattac ttgttactga aaaagggtgt agttacagag aacagttaga aaagattctc
      601 tataaatata gcttttcaac aaaacaaatg attgaatttc taggaattga gtcattgaaa
      661 aaacacttga aaaattcaga tgggattgcg ctattgccgg agtttattgt tgcagatgaa
      721 ttacaaaata aaagtttgtt tcaaatagat gtcgatgtcg atattccgaa tttagaaaca
      781 actttgataa ttaatcctga atccagtaag caagtactag aatcttttgt aaaagatgtc
      841 tttttataaa tattggtgaa aacgtgtagt tatggtgaaa ctcaaagata ataatttaaa
      901 tgagatgtta atgaaaaagt aattcaatat aaaaacaggt gatttatatc tttaataagg
      961 attatttcta gttgaaattt caattgcggg cattcatttt caaaatagta aagaatttaa
     1021 tagatgaaaa cctttgaatc atactagtta gtatggattg attaatattt taacctgcta
     1081 aatgagtagc ttatgtattt taaatagctg tcatctagca ggttctttat tattaataag
     1141 ttcagataaa ttattttagt ctgttttcta atgttgataa taataacttt aaatctgtac
     1201 tttcattgtg agatatatag tacatcataa atttttatat ttggattgag actctttgga
     1261 agattttcaa taaatgaata tttcacaaac ttccacttat caggattata aattataatt
     1321 tctgcaactg cattatcgaa gattctaaac aattttttga tttctatttc ttttagagat
     1381 aaagtaggga aaatgtcgat atattcttca agcgcataaa gactatgttt aacagaatcg
     1441 gttatgttca ttgaatatat cacaccaata tttatatttt gccatccaaa agaagaaata
     1501 acattatcat aaaatccatt gaatataaat tcagtcatcc cctctgaact tctccataaa
     1561 tataatggtg aataagtatt tgtaatgcaa ttactagttg tttgacttat taaataagct
     1621 tttataatta aatttttaaa tccatcagtc ttataaccat ttaatcgaac tctatctcta
     1681 attatttcca tattgtaatc actaggcaac ttaacatgat attgcattgc atgcatttag
     1741 cataccccct tttataaaaa ggatagcaat aataagtaaa atctcatatt atccaattgt
     1801 gatatagtta tcataaaaag tgataggtga ttaaattgaa ctttaatgat ttggaaattt
     1861 ttataactgt atgtgaagaa gcatctatca ataaagctgc aattaaactt agatatgcac
     1921 aatctaatat atctcaaaga attagcaagc ttgaaaatga attaggtgta gttttgcttt
     1981 ttagaaatca aaaaggtgct aaggcaacta aagcaggcga agaattttta gcgtatagca
     2041 aaaaagtatt aagagataca gagactataa aaaataaaat gaaatataac actatgtcta
     2101 ttttatgctc agaactgtta tttaattatt tatctgagag cgaagaaatt atgatgtcga
     2161 ataactcaat taattttatt tctagtggaa atattagaaa agctatagaa aaaaataatt
     2221 atgataaggt tatttcattc ataaaaatta atgactcaaa ttatagactt agtaatgttg
     2281 atactatgaa agtaacgctt tacagtaatg gaagtaatta tgataaagag cctttactaa
     2341 taaataaaga tgagttttgt cctttaagga aaataacttt agatattaag cttgattcac
     2401 aacgggtaat ggaatttgat tcattggcag caataataaa cttagttgaa caaggaaaag
     2461 gaaaggcttt attacctatg acttttgaga ataaaagaga tatagtacag gacatttcta
     2521 agatatttga agttagctac tatacttata atcatattat gcatcattaa ttgaaagttg
     2581 attgagttta aattacaaga acgatattaa gattctagta gttagaatga gcgatgtgat
     2641 agaaaagaat ttttgctttt taattggtaa attcgttatt ttaaagtagt ggtctttgta
     2701 gataggaaaa agcggattcc cttatcagcc ttttccactc ataaaattta ttattgtaac
     2761 ttttatgagg tgaggagcta aatattgttc gaactaaatt ttacttagac cttttctctt
     2821 tcaattcttt tttaatttga tcaggagatt tcctatcctt tgatggtttt agtaatttct
     2881 gtaccgtttc gtctctaagc atatcaccac caaactgatg attatatgca ggtaccatgt
     2941 aagcaacaaa accgtcgtcc ttattattat tgatatagcc ttcaatgatt ctttcatcaa
     3001 gaggaccttt gtccaaactt gtaaaatgta ccgacttaat cgtattaggc tcttttgtat
     3061 tatgtttaag atacaatgta atacgttctt gttgctgctt gtagtaaaat tctttttgtt
     3121 tcataagctc gttatacttc attataagaa tgacgcctac aataatgaag gctatagtga
     3181 atatagtacc gataataatt aaaatgtatt tttttgacat gatatcaact ccgatattag
     3241 taagggcata ggagcaattg aaatttccaa acaaggtaca cgagtgcttc tgaatttatc
     3301 ggcacgcttt tacatagatc aaaagaacgc gcactaaaat aatcatttta tctatgtaac
     3361 ttacatcttt gatactacag aagttcgtgc atttgttcaa tcgtctcata accattaaat
     3421 agcgttaatt atgaatgaag acatctataa catttattta tcttataaca tagtacaatt
     3481 acaaagcatc acaacggcga ctgtactcac cttaaatcat aacgacaacc gctaaaaaat
     3541 gatttgaaaa actaatcatt aattgccata ctcaactatt ttgaaaagta tcaatttcac
     3601 attatcaaat tattgagtat ctcaatttat tgttatacac aaacagtatt tttgttatca
     3661 tagagttaat aaatataata aattgaataa gtaacttcac aaaaattaga atgattcaat
     3721 tcaatcacaa ttatttgaaa atagaggtga gcaggtgaac gatatgttaa ttagtcttgt
     3781 aatcccagtt tttgctttgt tagttattgg tggtattatt tggatgatta tagaaggtat
     3841 agtacatatt tcaaaaaaga ataaagcaat tgataacttt tttaaccaag ttaataaagt
     3901 aagtgagaca tataaattcg ctactacttt tttatttcta atcttggcta cggctggtat
     3961 ttctcaattt tatctatatt atatagtatc agcgtttctt ttttggcttg tcatacttac
     4021 ctttggtatt gcaggtatca tttttttaat gccatatgga ttatgttttc taccgtttta
     4081 taagcaaaaa aagaaaaaac agacatttaa aaaatacatg gtttacacta cgattggttt
     4141 gtcaatttgt ctaggcttat ctctagtttt ggttcacact acgaaaattt atatggacga
     4201 aggtggcgta agatactatt acggtagttt tgtaatgaaa caagcgggcg gttatgctta
     4261 tttagcttta gcagtacttt caacgttgtt aattgttgcg aaaaaagcta caaataaaaa
     4321 taaagaaatc gaaaccgtcg acaatacaaa tataacggaa agataattaa gggagtgctc
     4381 attcaggagt gctctttttt gatgtccaaa tttagttgca aatgaaggca tagaagaaat
     4441 ttttatagtc atttattgga taatgaatta tggtcatatc gattaatttt attagtgagg
     4501 attttacaaa catttgttga ataaatatgg taatgataat atatgaatat ttttgaaaaa
     4561 acactaatat gattaaatta tttgttaaaa tggcattaag taaaaaacaa acagggaaca
     4621 aggtgggatt tcatgagtca attgctaaat gatacgttat cggcttggtt gttaattgaa
     4681 tctttaagtc caggagaagt aaattttaca gcggaagata tactctcagc tgaacatttt
     4741 aaaaatggtg caaagcaagc acaacttcaa agttttgatg aatattttga aatatggaat
     4801 gctgaacgct ttattatatc agaagaaaaa tcagagactg gggaacttat atttaaattt
     4861 tatagacatt gcttccgcta taatgaaatt aatttgaaaa ttcaggatat ttttgatgat
     4921 tattctgaga ttcataatcc aaatgggaca cactgttatg gttacacatt taacacagat
     4981 aaacacggca aagtgatagt tgattctata catattccga tgattatgag tgcattaaaa
     5041 gaaattgaaa agaacaaaaa tgccaatata gaagaaaaat ttaatgattc tgttgaaaaa
     5101 tttgttcaaa aagtaaaaga aattttagca gatgaaccaa ttaatgaatt taaattgaag
     5161 aagatggaca aagcttatga tgagtacttt tctgtattaa attcaaagaa agatggatta
     5221 tttggacatt atgtagcaat agaatatgtg aaagatagtg atttaccaca gccggaattt
     5281 aacagcttct tcataagtga tattgagaaa gcaagaaaat ctcccaacca aactttaatt
     5341 gattacattg aaggtgtaga agaaagtcag cgcatagaag tagatgaaaa taaagaaatg
     5401 tttgacaaat ttttacatcc ttcacgtttg cctgatggac gatggccatc acagactgag
     5461 tttagattgt ctttaatgca acaacttgct gtaaaccaaa ttacgagtgg taatgaaaga
     5521 ataagttcag ttaatgggcc accaggtaca ggtaagacta ctttattaaa agatatattt
     5581 gctcatctag tagttgaaag aggtaaagag ttagctaaac taaataatcc taaagatgca
     5641 tttgtcaaaa caaaaattca tgaaacggat gataaatacg tatacttact aaaggaatct
     5701 attgccaaat ataagatggt agtcgcatct agtaataatg gagctgttga aaatatatct
     5761 aaagatttac cgaaaattga agaaattata agaaatcccg aaaaatgtaa attccctaaa
     5821 tatgaacaga attatgcaaa tttagcacat gaattaaaag attttgctga aatagctgaa
     5881 gatttgattg gtgaaagtgc ctggggctta ttttctggag tttttggtaa aagtactaat
     5941 attaaccaag tattgagtca tatgttaaaa caagatgcga atgatattgg ctttgctaaa
     6001 ttactacaaa atgagaataa tcgtatgagt tataacgagt taatgagtga atggcaatca
     6061 catcaatgtg catttttaga agagttgagg catgttgaaa tgttaaaaga agaatctatt
     6121 agagcatatg atgtttataa aaattgtgag tctttctcta agattgaaca ggttattaat
     6181 agtgaaaaaa caagtattga agaacagata tatcatttag ataatgaaac gttacgagac
     6241 aataaagaaa ttgaagattt gggtgatcga attaattata atacaaagca actcgaaact
     6301 ttaaatgagt taattaaatc catcaaagaa agcaacaaag gttttattaa caaactgaaa
     6361 gcgatgttta attcagaaga agatgaaagc tataaagatc ataataaaga gaagcaacaa
     6421 ttattaacac aacagttaga gttagagaaa tgtaaaaaaa acaaacatga agaccttgtt
     6481 agcaaactaa aagaaaaaga gaaattaatt aaacaattaa ctaaagtaca gttgcaatta
     6541 gacgagttaa attcacaatt acaagagtta gaagcatatc gtattgagtc aaaaattaca
     6601 attccagaaa aagatttttg gagtgacaac aattatgatg agcgccaagt tactaatctg
     6661 tggacgagtg acgaacttca atacagacgt gccatgcttt ttttaagagc aatgatattg
     6721 cataaattat tattgattgc taataataca actatttatt atgcgattaa tgattttaaa
     6781 gatagaagga aattaattga tgcaaatcca gataaagtac acaacgcatg gaatgtgatg
     6841 catttaatat ttccagtagt tagtacgacg tttgcaagct ttaaatctat gtatgggggc
     6901 ataccaaaag atttcataga ctacttattt attgatgaag caggacaagc aatacctcaa
     6961 gcagctgtgg gagcattata tcgttcaaaa aaagttgtag ctgtaggtga tccgattcaa
     7021 atagaaccgg ttgtgacttt agaaagtcat ttaattgata acattcgtaa aaattatcat
     7081 gttccggaat atctagtttc taaagaagct tctgtgcagt ctgttgcaga caacgccaat
     7141 caatatggct tttggaaatc tgatgctact gatagtaatc aaaaaacatg gataggcata
     7201 cctttatggg tgcacagacg atgtttaaaa cctatgttca cgatagctaa ccaaatcgct
     7261 tataataata aaatggtgtt gccaagtaat attacaaaag taggtaaaac aggttggtat
     7321 gacgttaaag gaaacgcagt tcaaaaacaa tttgtgaaag agcatggtga aaaagtagtg
     7381 ggattattag ctgatgattg gattgaagca attaaggaag gtaaaaatga accgagctca
     7441 tttgtaatat cgcctttttc agcagtacag caacagatta aacgtatgtt aaagcaacaa
     7501 ctaccgacta gaattgatat tgaacgtaca aaaattaatc aatgggtcga taaatccatt
     7561 ggtactgttc atacttttca aggtaaagag gctcagaagg tgtattttgt aataggtact
     7621 gataataccc aagatggtgc tgtgaactgg tcatgcgaaa aaccaaactt gttaaacgtt
     7681 gcagtgacaa gagctaagaa agagttttat gtaattggcg acatgcaaag aatacagatg
     7741 aaaccatttt atgagacgat ttttaaagaa agaaatgtaa aatgaaattg aaataacagt
     7801 attacttgat acttaattat cgagcaattt atacatttta aaaggagcaa aattgaataa
     7861 tgaagaaatt taacaactgg atattaaatg caataagtgg atctcaaaca gacaagaatg
     7921 aaacaactga agaattaaaa ggggcaaaat ttatcatttt atatgcatat tcaatgctcg
     7981 ttttgcttgc gttagtaatt tctaacatat tcattcacat tttggagcct aaactatcaa
     8041 ttaccactca aatcatcatc gttttgattt taattgaaac actaattgga ctgcgtttct
     8101 tgaaagcgta cgatgttaag cgtggcaaag ataaagaaaa taagaaaaat agtaaggatt
     8161 tcgttaaact aaaatcaatt ttagtagcaa ttttatttac atcattggcg ctgacagcag
     8221 gcactgtagc tgatatatac ggtttcactg acttaggaaa tactagaagt gatttaatcg
     8281 tttggagcat aggtggtatt atatttggcc tcgtatgtta cacaatggaa gataaaaaat
     8341 aacgataagg agctggcgat tataaagcta gctccttttt taacttatgt aaatggcggt
     8401 tataaaatgt aggaaaatgg cgaaatgaaa atgctgtttt tcctacattt tttctttttt
     8461 aaattatata atcatgtctt aactcaatct tcgattggag gttatttgat tgagacatga
     8521 catttatgaa ggagtgctat tttacattat gaaaggtatt aaaccaaatt atgccgagct
     8581 tggtcgacaa tataattgtg atccaagaac agttaaaaaa tattatgaag caggaaaaga
     8641 aaatgaatta gaacgattga agaaaagaca acaaaataag aaagcatcaa aactagatcc
     8701 atttaaagaa attattaata aaaaaattga attaggatgt acagctatgg ccatttttaa
     8761 atatatagag aaaaagggtt atgaaggtaa atatactatt ctacgagaat actgtaaaaa
     8821 taaaaaacaa aatgagacta aaaaagcaac tatacgcgta gaaactaatc ccggtatagc
     8881 tgctcaagta gactggaaag aagatatggt aatgcatgat aagtttggca gaacttatca
     8941 attcaacatc tttctttacg ttctacacta ttcaaaaatg aagtatatca cattaacttg
     9001 ggatagaaaa caagatacct tatttgaatg tttaaaagac gcttttgaat acaccgaagg
     9061 ggttccaaaa gaaatctggt tcgataatat gagaactgta gttgatcgac ctagaacaca
     9121 atataaaaaa gtcgtcttta ataatttatt ttatcaattt agtaaggatg ccaactttga
     9181 acctattgct tgtagaccct atcgtcctca aacaaaaggg tctgttgaat cattagctaa
     9241 atttgttgaa cagcgtttaa gaccatacga ttatgaattt tatgatgctg tagaacttat
     9301 tgggctagta aacgatttat gtcacgaatt gaatcactta gaaatttcac aagcaacaga
     9361 acaacgacct atcgacgttt tcaattatga agaaaaagaa catttaaatt cttttaatgc
     9421 caagttacta gatacttaca tcgaaaatga gtgtataaga atcgtttcta aagaatcgat
     9481 gattaacttt agaaaaggta aatactcggt acctactaaa tacattggtg aagaagtaca
     9541 agtgatattc aataattcta ctgatgaatt gctgatttat tatgatggtg aattaataag
     9601 acggcataat ctatccgaaa gaaaatttaa ttatatcgtt gaagatatga gtgaaatatt
     9661 aaaatcagat gtatttaaac ataaggatga caaagaaatt cttacgtata tagaaaattc
     9721 attattactg tatgacgaaa tttaggagga ctttcgatga atacgaacca tcaaaaatta
     9781 cttaataact ttgaaatatt aaaactaaaa aaattcaaag attattatcc aaactatatt
     9841 gaattacttt ctaaaaatga gaaatcttta actgaaatat tgattgattt aacggaaaaa
     9901 gaaatagaat atcaatcaga attaaaattt aaacgtgctg tgaattcagc acgtttccct
     9961 aaaataaaat atttacatga ttttgatttc atgtttcaac ctagtataaa tcaacaagaa
    10021 atactcactt taaaatctat gcatttttta gaagatagta taaatatttg tttcttaggt
    10081 aatagtggtg ttggtaaaac acacctagca atctcattag gaatagaggc atgtaagcaa
    10141 aatataaaga ctagattcta tactttcaaa gaattaatag acttattaac tgtctcagat
    10201 tccaaaggaa tcattaataa aacattaaag caattaagca gaatagagtt acttatcatt
    10261 gatgaaattg gttatactcc catcaccaaa gaacaagctg atttattcta ccagttaatg
    10321 tcactaaggt atgagtggaa atcaacaata attacgacta atattccatt ttcgagttgg
    10381 ggagagtcat ttagtaataa gattgtatca gcagctataa ttgatcggtt agttcaccat
    10441 tcaaaagtat ttaaaattac tggagaatca tatcgattaa aagattataa aaccgaaaaa
    10501 tcattaaata tacgacaatc ttaaaccgct aaaaaacgac attttcaaac cgccataaaa
    10561 cagc
//
LOCUS       DAKPJH010000086        10537 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.086, whole genome shotgun sequence.
ACCESSION   DAKPJH010000086 DAKPJH010000000
VERSION     DAKPJH010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10537
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.086"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(87..695)
                     /locus_tag="OY092_001961"
     CDS             complement(87..695)
                     /locus_tag="OY092_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HCX1076892.1"
                     /translation="MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLND
                     RAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLINFVTRSEGIPEGVLIRAIEPEEG
                     LSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
                     PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK"
     gene            1094..1714
                     /locus_tag="OY092_001962"
     CDS             1094..1714
                     /locus_tag="OY092_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCX1076893.1"
                     /translation="MEQLPQVGFMKSFVLFWKNYVNFKGRSRRSEYWYMMLWHLIFMV
                     PAVCVLIISLFLFFISIAADNETLIVMSILMIILTSVYTFVYSLATFIPNLALCVRRF
                     HDISRTMLFPMIMTAFSIIFYIVLQIIDSYYDSDFTLMPMGLNILLVFLYFVYLSLTI
                     VMIVFLCFDSKPANKYGESPKYPSSIKNQPVTSETPKTPGETDNQL"
     gene            1946..2845
                     /locus_tag="OY092_001963"
     CDS             1946..2845
                     /locus_tag="OY092_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1076894.1"
                     /translation="MGLVIEHVTKRFGKMTAVNDISLELESGKMLGFLGRNGAGKTTT
                     FRMILGLSEPTEGHITYNGKKLDKTMYNRIGYLPEERGLHGKLTVEEELKYLATLKGM
                     SKTEIQQQISYWLERFDITENRKKRIDSLSKGNQQKIQLLASMLHKPELLILDEPFSG
                     LDPVNVELLKEAVKDLNDWGSTIVYSSHRMEHVEELCDDVCILDKGQLVVSGDINHVR
                     ASNGNKKVVIESETTLPDLTNIRGIIHSENMKQGLQLTIENEDVAKDIYQVVAHQGYV
                     KRFQVVEPSLQDIFIEKVGGKDA"
     gene            2838..4070
                     /locus_tag="OY092_001964"
     CDS             2838..4070
                     /locus_tag="OY092_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1076895.1"
                     /translation="MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINM
                     FDDGPDKIGVAAPNEQIYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIK
                     VNQNRTLQGTIISEKRVSHEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVD
                     NKVISNDEVDKVSEGQKIFNYALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMI
                     ITSISPIQHIFAKILGVIAVAVTQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQ
                     IIIVGIISSIVGIMAYVLLAAILGSLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNP
                     DGQLALITSYIPFLAPFQLVVRAQTSGLQIHEVILSSLISIVMVAVLIWIAIKTYKDS
                     VLTFERGLFNSMKRVFKK"
     gene            4054..4239
                     /locus_tag="OY092_001965"
     CDS             4054..4239
                     /locus_tag="OY092_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076896.1"
                     /translation="MYLKNKIDESDTHLSYKMMMKACYSYFFIFSYRIMSKKVYNMNV
                     KTNFLKWECEVRRNVNK"
     gene            4288..4614
                     /locus_tag="OY092_001966"
     CDS             4288..4614
                     /locus_tag="OY092_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HCX1076897.1"
                     /translation="MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILML
                     YGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVM
                     LLPSRA"
     gene            4644..5663
                     /locus_tag="OY092_001967"
     CDS             4644..5663
                     /locus_tag="OY092_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HCX1076898.1"
                     /translation="MIVEVEHQRQGVDLIKIDNDETKIIFTNYGARVVSWKYHDNNIV
                     LGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHG
                     LDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVA
                     SEDTLFSPTNHVYFNLNRDNNVVDNHRISSNQLDMYVLDERNIVTGDILDLHEVFEDN
                     KIKLSDIFTSQHAQLSQQMIRFGGLDHPFTVGEHKMYVENHEFMLEVDTDMPHVVFFT
                     FNQPDEWDSPFNIYKPHSGFTLETQFLPNDINLYGDKAPSILKAGEVFNSKTSFRIEE
                     KVEND"
     gene            complement(5897..6551)
                     /locus_tag="OY092_001968"
                     /pseudo
     CDS             complement(5897..6551)
                     /locus_tag="OY092_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501074.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
     gene            6725..7411
                     /locus_tag="OY092_001969"
     CDS             6725..7411
                     /locus_tag="OY092_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase A"
                     /protein_id="HCX1076899.1"
                     /translation="MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLI
                     KERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGG
                     ALFREKVIDEMASRFVVVVDETKMVQYLGEMFKLPVEVDKFNWYHILRKIESYADIKV
                     ERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVG
                     TQEGVKILEK"
     gene            complement(7477..8733)
                     /gene="sdpC"
                     /locus_tag="OY092_001970"
     CDS             complement(7477..8733)
                     /gene="sdpC"
                     /locus_tag="OY092_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpC"
                     /protein_id="HCX1076900.1"
                     /translation="MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFE
                     VTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVIERLLLALILPLVILIIGMYSFN
                     TFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
                     LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLI
                     FLFSEEIGDLFSIKVIAISTAIVAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHV
                     NDDKETNHTEAEKSSSNIKNAEKTGVATASTVGIAKNDTENTVADEPSIHEGTEKTEA
                     QHHIDNQTESNHDEDHDITSESVESAEPVKHAPQSDDLTNDSNEDEKQSLKEPATYKE
                     DRRSSVVIDAEKHIEKTEEQSSDKNK"
     gene            9023..9958
                     /locus_tag="OY092_001971"
     CDS             9023..9958
                     /locus_tag="OY092_001971"
                     /EC_number="3.5.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HCX1076901.1"
                     /translation="MYKQGEPNLWTGRLDSETDPKKFRHFQTVTFEDLSKLEKSSMPS
                     GVGILGYAVDKGVALNKGRIGAKEGPDAIKQAFAGLPDLNQCETLVDYGNVYHDHEEL
                     IDTQKEFAMLAAKSIANHRQTFLLGGGHDIAYAQYLATRKVYPTQSIGVINIDAHFDT
                     RAEQQSTSGTSFRQILEEDENTDYLVLGIAQGGNTQSLFDYAKEKKIDYVFADELLSH
                     VSPTIKDMIERFVHEHDVIMFTICMDVIDSAFAPGVSAPAVLGLYPHTVLELAKRIIP
                     SDKVSSVSIAEMNPTYDADNRTAKLVANLVHHFLK"
BASE COUNT         3611 a         1446 c         1983 g         3497 t
ORIGIN      
        1 acccatccgc atgttgacgg tacgattgat tgacttataa ggagatagat ttcattttca
       61 tgatagtaat caatgaaaga tggcatttat ttccaagtat cttcgggaaa catacaatct
      121 gatttacgca tgcgagacac aaatggatta cctttcactg tgtaacgtaa agatttatgt
      181 gtccaatcac ctttatttgg aataccgatt cgtggactag caataatatc tttaggatat
      241 ttacgattct tagtatcaat agacaatcta cagtcattta acgtagcgcc atcgatagcc
      301 cgtggaatgt taaatgcctt agtccatttt cctgggccat tcgttacctc gtagcctttc
      361 ttacctctgt tacggaacat agcggataaa ccttcttctg gttcaattgc gcggataagt
      421 acgccttcag gtataccttc agatcttgtt acaaaattaa tgagtaaatg cgtatgcatg
      481 acatgtgcat aaattgtacc accacgttta tataatgacg taactttagg tgttatttta
      541 ccgccatagc catgagccgc acgatcattc aaacctaagt atgcttccgt ttccacgatg
      601 tagcctgtat acgtttgagt ggtatcctga taaatcactt tgacacctaa taagttttta
      661 gcaatttgtc ttgtatcatt attaacgaaa tccataatat tctccttgca attatatgat
      721 taatttaaat aaaaatgaaa aagatatttt tattgtggta aatgtttgat aaaatagtat
      781 tgttaagaat tataaaaatg taaagtatat actttgttat ggaatatttt atttgcagag
      841 attgagtctc ttttgaacgc gaacattgca gtgtgacata tttttagtat agttaacgaa
      901 gcgttgactt tcaaatgagt ctccatatag atgcgtactt gtagcgggtt ttcatttaac
      961 tagtgatgaa atataaagtt cattttccaa agtgaatgac gattgaaatg aagtggcttg
     1021 ataatgaatc ttgtaaatta taacggtaat aataattaaa aatataaata tgattaacga
     1081 aagggagatt acaatggaac aattacctca agtaggtttt atgaaatcat tcgtattatt
     1141 ttggaaaaat tatgttaatt ttaaggggag atcaagacgt agtgaatatt ggtatatgat
     1201 gttgtggcat ttaatattta tggttccagc tgtgtgtgtg ctaataataa gcctatttct
     1261 attctttatt tctatagcgg cagataacga aacattaata gttatgagta tattgatgat
     1321 tatccttaca tctgtgtata cttttgtcta tagtttggca acgtttattc caaatttagc
     1381 gttgtgcgtt cgaagatttc acgatatatc aagaacaatg ttatttccaa tgattatgac
     1441 agcattcagt attatatttt atatagtatt acagattatc gatagttatt atgacagtga
     1501 ttttacctta atgccgatgg gtcttaatat tttgttagta tttctttatt ttgtttattt
     1561 aagcctaaca attgttatga tagtattcct atgctttgat agtaagccgg caaataaata
     1621 tggcgaaagc ccaaaatacc catcttcaat taaaaatcaa ccagtgacat ctgaaacacc
     1681 gaaaacaccg ggagaaacag ataatcaatt gtaatgatat aaatatctcg gcacaatgat
     1741 gctgggatat ttttttacca ataaggcaat aaaggcatgg aaaaaagcat atccaacact
     1801 aatcatactt aacatgcaaa gatggtacta tttaaatttt tcgatttcag aaattttaaa
     1861 aataaattca ctttaaaaat attgcattta tagagaatag aaatgttata ttaagataaa
     1921 tacatattgt tttaggaggc gaagtatggg acttgtaatt gaacatgtta cgaaacgttt
     1981 tggcaagatg acggcagtaa atgatatttc attagagtta gaatcaggca aaatgttagg
     2041 ttttctagga agaaatggtg caggtaaaac aacgacattt cgtatgattt taggcttaag
     2101 tgaaccaact gaaggacaca ttacgtataa cggtaaaaaa ctagataaaa caatgtacaa
     2161 tcgtattggt tatttaccgg aagaacgcgg tttacatggg aaattgacag ttgaagaaga
     2221 attgaaatat ttggcaactt taaagggaat gtcaaaaaca gaaatacaac agcaaatatc
     2281 gtattggctt gagcgttttg atattactga aaaccgcaaa aaacgaattg atagtctatc
     2341 aaaagggaat caacaaaaaa ttcagctgtt agcaagtatg ttacataaac cagaattact
     2401 aatattagat gagcctttca gtggtctaga cccagttaat gttgagttat taaaagaagc
     2461 tgttaaagac ttaaatgatt ggggcagtac aatcgtttat agttctcacc gtatggagca
     2521 tgttgaagaa ttatgtgatg atgtttgtat tttagataaa ggtcaacttg ttgtttctgg
     2581 tgatatcaat catgtacgtg catctaatgg taacaagaaa gttgtcattg aatcagaaac
     2641 aacactacca gatttaacaa acattagagg catcattcat agtgaaaaca tgaagcaagg
     2701 tcttcagttg acgattgaga atgaagacgt agccaaagat atttatcaag ttgtggcaca
     2761 tcaaggttat gttaaacgat tccaagttgt agaaccatca ttacaagata tattcattga
     2821 gaaggttggt ggcaaggatg cataagtttt gggcgacatt tactttgaca tatatcaaaa
     2881 aaattaaagc taaatcattt gtaattttta tgattattat tgctgcctta atgattggcc
     2941 tatctaacat tgataagatt attaacatgt ttgatgatgg tccagataaa attggtgtag
     3001 cagcaccgaa tgaacaaatc tataaggttt tcaagcaaca ggcgaataca tttcatagtg
     3061 atgctaagtt tactaaagtt tctatagaag atgctgaaaa agaagtaaaa aaacataaac
     3121 ttgataaagc ttatattatc aaggtgaatc aaaatcgcac gttacaaggg acaatcatta
     3181 gtgagaagcg agtaagtcat gaagattcac aaaaagtaca agcactgctt acagctattc
     3241 aaacaaatat ggtagccgga gaattaaata tcaacaaaga agacttacaa aaattacaag
     3301 cacaaagtaa agttgataat aaggtgattt ctaatgatga agtcgataaa gtatcagaag
     3361 gacaaaagat tttcaactat gctttagctt acggcattat ctttctaatg ttctttattg
     3421 ttttaaatta tgcatctcaa atagctatgg aaattgctag tgagaaaaca tcgcgtgtca
     3481 ttgaaatgat tattacaagt atttcaccaa tccaacatat ttttgctaaa attttaggcg
     3541 ttatagcagt tgccgtgact cagattattt taattgtatt gatggcagtt atatgcattt
     3601 ttgcctttga cttaaaagac ttgctacaag gttttaacgt ggaaatgaat caattgtctt
     3661 ggcaaattat tattgtcgga attattagta gtattgttgg aattatggcg tatgtattac
     3721 ttgcagccat tctcggatca ttaacatcta gaatagaaga tttaaatcaa tctttgatgc
     3781 cactgacatt acttggtatg attgcatttt atatcgcgat attcacgata aataatcctg
     3841 atgggcaact tgctttaatc acaagttata ttccgttttt agcgccattt caattagttg
     3901 tacgcgctca aacttcaggg cttcaaatac atgaggtcat cttaagttca ttaatctcaa
     3961 ttgtaatggt agctgtcttg atatggattg caattaaaac atataaagat tcagtactta
     4021 catttgaacg tggcttattt aattcaatga aacgtgtatt taaaaaataa aattgatgag
     4081 agtgacacac atttatcata taaaatgatg atgaaagcgt gttactctta tttttttata
     4141 tttagctata gaataatgtc taaaaaagtg tacaatatga atgtgaaaac gaacttttta
     4201 aaatgggaat gtgaagtaag aagaaatgta aacaaatgat atgtagccga tagattattg
     4261 gtagcaaatg tgtgatggag tgatttcatg ttatatccga tttttatatt tatattagct
     4321 ggcttatgtg aaataggtgg gggatacctg atttggctgt ggcttaggga aggacagtct
     4381 tcacttgttg ggctaatagg cggtgcgata ctcatgttat atggtgtcat tgcgacattt
     4441 caatcatttc catcattcgg aagagtatat gcagcatatg gtggcgtatt tatcatcatg
     4501 agtttgattt ttgcgatggt cgtagataaa caaatgccag ataaatatga tgttatcggt
     4561 gcaatcattt gtattgtagg tgttttagta atgttgctac ccagcagagc ttgaacactt
     4621 gtggttagaa gggagaagta aaaatgatag ttgaagttga gcaccaaaga caaggtgtag
     4681 atttaatcaa aattgataat gatgaaacta aaattatttt tacgaattat ggagcaagag
     4741 tagtgtcttg gaaatatcat gataataata ttgttcttgg aaatgttgtt gaagcggatg
     4801 aattttatca tagtaatcct tttaaatttg gtgcttctat aggaagatat agcggtagaa
     4861 ttgataatgc taaatttaag ttgaaaggta aagaatatca gttagaaaaa aacaacggcg
     4921 aacatcattt acatggtgga tgtcatggtt tggacaataa gttatttgat tatgaaatta
     4981 gaaatgaaat tgctcaaatt aaagtgatat ttaagacggt gttgaaatca gctgatgatc
     5041 atttcccggg tgatatcgat gtgacgatta cacatattta tgatgcggat caccaatggt
     5101 cgattgaata cgaagcagtt gcatcagaag acacattgtt tagtcctacg aatcatgtgt
     5161 acttcaattt gaatcgagat aataatgtcg ttgataatca tcgcatttca agtaatcaat
     5221 tagatatgta tgtattagat gagcgaaata ttgttacagg tgatattcta gatttacatg
     5281 aagtgtttga agataacaag ataaaattga gtgatatttt tacatcacaa catgcgcaat
     5341 taagccaaca aatgatacgt tttggtggtc tcgatcaccc atttacagtt ggtgaacata
     5401 aaatgtatgt tgaaaatcat gaatttatgt tagaggtcga tacagatatg cctcatgttg
     5461 tattctttac ttttaatcag cctgatgagt gggatagtcc atttaatatt tataaaccac
     5521 attctggctt tacattagaa acacaatttt taccaaatga tattaattta tatggtgaca
     5581 aagcaccgtc aattttaaaa gctggtgaag tgttcaattc gaaaacaagt ttccgtatcg
     5641 aagaaaaagt agaaaatgat taaaagtatc ggcatttata taatatatat gttgtttggc
     5701 ggaattttga ataggttatc aagaatcgaa tcaaatgaag tgacatcatt aatatacagt
     5761 ttgaaataaa aaaatatata acataaaaaa ggaatcaata gcatcagtag ttatagataa
     5821 gactattata caaacgatgt gtaagttgat tccttttgtt ttgaaaagtt catttaacac
     5881 ttataatgaa aggtaattat ttcaatgttc tgttatacat tttttgaagt ttatcgcgtc
     5941 ttgttggtga cagaaatgga ttgtttagtg catatcgtaa cagatcttga ttttgtctat
     6001 cattataata aaggtcatta agctgttgta cagataaacg atgttcgatt ggtgcttctt
     6061 gtattaagta aagctgatca tttggagata catagccttg ttttaatacc cggaaataga
     6121 aacctgtttt accagatgta gacatgcgct tcactaaatc aggaatatta tattttgctt
     6181 gaattttcca gcatggttct ctaatttcag aaacctcaat taacgcatca cctaaacgat
     6241 attgattacc aaagtaaaca tcagattcgt ctaaataatc aaatgttaaa ttctctccaa
     6301 acatcgcatg agtaggtagt gagggtaaat catcttgata cagtgcatag ttgtgtttac
     6361 taaacccaca aactgcttta tgtggcccac catgatcttt ataagcctgt tcaatcacca
     6421 gtgaaaccag ttgaagataa ccatgttgtt tgcgaaatct tagttttatc taaagcagag
     6481 cgcatcggtc ttttcgagct ataaggcaaa tcttggattt ttcctgtcga aatcgcgtga
     6541 attgatatca tatcattctc cttaacgagt attatttaaa atatattgta ctataaaaca
     6601 tttttagaat tgtaaattct gattgatatg tttaaaaaaa tgttagaaat aagggtatgt
     6661 taatttataa gagtcatgta aaatatgaat tgaatagatt acataaatat gggaggctac
     6721 cttcatgaaa gatgtcaaag cactcaagtt aatgacatta aatgatgttt taagtcaaat
     6781 caatggtgac atgacgctgg gaattggtac aggaagtaca atggaattac tcttacctca
     6841 aatggcgcaa ctaattaaag aacgtggtta caatattaca ggtgtatgca cttctaataa
     6901 aattgcattt ttagcaaaag aattaggtat taaaatatgt gaaatcaatg atgttgatca
     6961 tatcgactta gcaattgatg gtgctgatga agtagatcca tctttaaata taattaaagg
     7021 tggcggtggt gcgctgttca gagagaaagt tatagatgaa atggcatcgc gttttgttgt
     7081 ggttgttgat gaaacgaaaa tggttcaata cttaggtgag atgtttaagt taccagtaga
     7141 ggtggataaa tttaactggt atcacatatt acgtaaaatt gaatcatacg ctgatataaa
     7201 agtagaacgc cgtgtaaacg aagatgtcgc atttataact gataatggca attatatttt
     7261 agattgtaag ttaccaaaag gaattgaccc atataagttc catgagtatt taattcatct
     7321 gacaggtgtg tttgagacag gatacttctt agatatggca gatcaagtta ttgtaggcac
     7381 tcaagagggt gttaaaattt tagaaaaata atatatagta tagaaaagcg cttgctagca
     7441 tcatcttttt aagaggtact agcaagcgct ttgttattat ttgtttttat ctgaagattg
     7501 ttcttcagtt ttttcgatat gtttttctgc atcgattaca actgatgaac gtctgtcttc
     7561 tttataagtc gcaggttctt ttaatgattg tttttcatct tcatttgaat cgtttgttaa
     7621 atcgtcactt tgtggtgcat gtttaactgg ttctgctgat tctactgact ccgaagtgat
     7681 gtcatgatct tcatcatgat tagattcagt ttgattatct atgtgatgtt gagcttctgt
     7741 tttttcagta ccttcatgaa tgcttggttc gtcagccact gtattttcag tatcattttt
     7801 agcaataccg accgttgatg cagtagctac acctgttttt tcagcatttt taatatttga
     7861 agaagatttt tcagcctcag tatgattagt ttctttatcg tcattgacat ggtctaaata
     7921 attattaggc tcaagttctt caaggtttcg tcttgttgtt aaatatgcaa tacctcggat
     7981 aattaagctt aaaccaatgt atcctactgc aacgattgct gttgaaatgg cgatgacttt
     8041 gattgaaaat agatcgccga tttcttcgct aaacaagaaa ataagtccga atgtcattga
     8101 agcatgaaat gtcgttgcaa tataaattgt acgtccttta gtcgctctaa ttaattcacc
     8161 aaggatcata gagaatgaga atgtataaag gaagttataa gcagcaaatt ctgtaccata
     8221 agttgtattt gctgagaaaa ctgaatacat caaaccaaca acaatacttg caaagaacgt
     8281 gttcattttc gtttcaacaa tattttgtaa gtatgaacgg aatccgaatt ctactacgaa
     8341 agccattaga atatgtccaa tcagaatgtg tgtaataggt actgataagc ctgttgattg
     8401 taataaaata aagctatctg caaatgtatt aaagctgtac ataccaataa ttagaataac
     8461 taaaggtaaa attaaagcta gcaatagacg ttcaattact ttcaggctga ttgagaattt
     8521 taaacctgca agttggacct ttttatattt gaaaacgagt atacaaatga ttgcagcaat
     8581 taatggtgct agatctgtaa cttcaaatat aaagtgtttg acaccaatta tagactggaa
     8641 atctctgagc ataatggata acgccattgt aatgacaaag aagacgaaaa tcgtcattgc
     8701 ccattgaaaa ccagaaattt tattgttctt cattatatgt aacctccatt aggtaacaag
     8761 caaaatatct tttagtaaca attatacata ttacaagccg agagataaat tgtctatgtc
     8821 aatattaatg aaaatgtaat agtcttgacg tattttatta acataaatca gctaagtatt
     8881 cgttattaca tagaaaatag gggtaaaagt aatgtagata agtattttta agatacggat
     8941 ttaactatga attgaattca aaatttccta tacgttatac tttaattgtt aataagccac
     9001 ataaataaga gggggaaatg ctgtgtacaa gcaaggtgaa ccaaatttat ggactggaag
     9061 gttagatagt gaaacagacc cgaaaaaatt tagacatttt caaacagtaa catttgaaga
     9121 tttgtctaag ctggaaaaga gtagtatgcc atcaggggtc ggtatattag gctatgctgt
     9181 tgacaaaggt gttgctttaa acaaggggcg cattggtgca aaagaaggac cagatgcgat
     9241 taaacaagca tttgcaggtt tgccggattt gaatcaatgt gaaactttag tcgattacgg
     9301 aaatgtttat catgatcatg aggaattaat tgatactcaa aaagaatttg ctatgcttgc
     9361 agcgaagtca attgctaatc atagacaaac atttttatta ggtggtggac atgatattgc
     9421 gtatgctcaa tatttagcaa cacgtaaagt ctatccaaca caatctattg gtgtgataaa
     9481 tattgatgcg cattttgata cacgtgctga acaacaatct acatctggaa cgagctttag
     9541 acaaattttg gaagaagatg aaaacacaga ttatttagtg cttggtattg ctcaaggtgg
     9601 taatacgcaa agtttatttg attatgctaa agagaaaaag attgattatg tctttgcaga
     9661 tgaattattg agtcacgtat caccaacaat taaagatatg attgaacgtt ttgtacatga
     9721 acatgatgtc attatgttta cgatttgtat ggatgtcatt gatagtgcgt ttgcacctgg
     9781 ggtaagtgcg ccggcagtgt taggtttgta tccacatact gttcttgaat tggcaaaacg
     9841 tattattcca agtgataagg tgtcttcagt tagtattgct gagatgaatc caacatatga
     9901 cgctgacaat agaactgcga agctcgttgc taatttagtg catcattttt taaaataatt
     9961 aaaaatattt atatgtgacg aaatttgcat tgcagggcag aatgtgagta tttcgtaata
    10021 gaagttatat taacgttgat atatttgaaa aataattgca gtaagaagac tcttaagttg
    10081 tagtcatctt actgcttatt tatgttcgtt ggtctgaatg taatgattta tacatggaaa
    10141 tcataaaatt ggttgtgaag ttgttttaca gttgactacg caactgcata agaggctcta
    10201 ataacttaag ttaaagtcaa aaggtataca gttgactacg caactgcata agaggcacta
    10261 ataacttaag ttaaaggcaa aaggtataca gttgactgag caactgcata agaggcacta
    10321 ataacttaag ttaaaggcaa aaggtataca gttgactgag caactgcata agaggctcta
    10381 ataacttaag ttaaagtcaa aaggtataca gttgactgcg caactgcata agaggctcta
    10441 ataacttaag ttaaagtcaa tggtgtacag ttgactgcgc aactgcataa gaggctttaa
    10501 taacttaagt taaagtcaaa aggtatacag ttgactg
//
LOCUS       DAKPJH010000087        10527 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.087, whole genome shotgun sequence.
ACCESSION   DAKPJH010000087 DAKPJH010000000
VERSION     DAKPJH010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10527
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.087"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..3294
                     /locus_tag="OY092_001972"
     CDS             <1..3294
                     /locus_tag="OY092_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HCX1076902.1"
                     /translation="LEKTQELIDKYSAFDEQEKQNILTRTKEKNDLRIKKEQELNQKI
                     KELKEKALSDGQISENERKEIEKLENQRRDITVKELSKTEKEQERILVRMQRNRNAYS
                     IDEASKAIKEAEKARKARKKEVDKQYEDDVIAIKNNVNLSKSEKDKLLAIADQRHKDE
                     VRKAKSKKDAVVDVVKKQNKDIDKEMDLSSGRVYKNTEKWWNGLKSWWSNFREDQKKK
                     SDKYAKEQEETARRNRENIKKWFGNAWDGVKSKTGEAFSKMGRNANHFGGEMKKMWSG
                     IKGIPSKLSSGWSSAKSSVGYHTKAIANSTGKWFGKAWQSVKSTTGSIYNQTKQKYSD
                     ASDKAWAHSKSIWRGTSKWFSNAYKSAKGWLTDMANKSRAKWDNISSTAWSNAKSVWK
                     GTSKWFSNSYKSLKDWTGDMYSRAHDRFDAISSSAWSNAKSVFNGFRKWLSKTYDWIR
                     DIGKDMGRAAADLGKNVANKAIGGLNSMIGGINKISKAITDKNLIKPIPTLSTGTLAG
                     KGVATDNSGALTQPTFAVLNDRGSGNAPGGGVQEVIHRADGTFHAPQGRDVVVPLGVG
                     DSVINANDTLKLQRMGVLPKFHGGTKKKDWLDQLKGNIGKKAGEFGATAKNTAHNIKK
                     GAEEMVEAAGDKIKDGASWLGDKIGDVWDYVQHPGKLVNKVMSGLNINFGGGANATVK
                     IAKGAYSLLKKKLVDKVKSWFEDFGGGGDGSYLFEYPIWQRFGRYTGGLNFNGGRHYG
                     IDFGMPSGTNIYAVKGGIADKVWTDYGGGNSIQIKTGANEWNWYMHLSKQLVRQGQRI
                     KAGQLIGKSGATGNFVRGAHLHFQLMQGSHPGNDTAKDPEKWLKSLKGSGVRSGSGVN
                     KAASAWAGDIRRAAKRMGVNVTSGDVGNIISLIQHESGGNAGITQSSALRDINVLQGN
                     PAKGLLQYIPQTFRHYAVRGHNNIYSGYDQLLAFFNNRYWRSQFNPRGGWSPSGPRRY
                     ANGGLITKHQLAEVGEGDKQEMVIPLTRRKRAIQLTEQVMRIIGMDGKPNNITVNNDT
                     STVEKLLKQIVMLSDKGNKLTDALIQTVSSQDNNLGSNDAIRGLEKILSKQSGHRANA
                     NNYMGGLTN"
     gene            3294..4118
                     /locus_tag="OY092_001973"
     CDS             3294..4118
                     /locus_tag="OY092_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HCX1076903.1"
                     /translation="MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGV
                     DGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKY
                     AVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTP
                     KYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDK
                     NTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR"
     gene            4127..5710
                     /locus_tag="OY092_001974"
     CDS             4127..5710
                     /locus_tag="OY092_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCX1076904.1"
                     /translation="MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTV
                     YRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSV
                     ESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKN
                     GLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELR
                     TAIKVFGKKYTAEEKKNYNPIRTTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNE
                     TVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLTKNIDKGKHVLEMIFLG
                     EDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIR
                     YANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYN
                     TELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHL
                     YTSTLNSPFETMDIGSVLI"
     gene            5710..6000
                     /locus_tag="OY092_001975"
     CDS             5710..6000
                     /locus_tag="OY092_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076905.1"
                     /translation="MATEEVKIKALLENDKQYFPATHWKAINGIPYAGSSDIDGLPQD
                     GIISVDDKNKLDKLKIGEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY"
     gene            6016..7926
                     /locus_tag="OY092_001976"
     CDS             6016..7926
                     /locus_tag="OY092_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076906.1"
                     /translation="MENLYLIKDLGALAGRDYRAKEIQNLQRIEQFALGLTTEFKLHQ
                     KAKTMQHFAEQIYYNGRSQAAVNKSLQSQINALVVAPRNNSANEIVQARVNVNGETFD
                     TLKEHLDDWETKTQINKEETIRELNKTKQEILDIEYRFEPDKQEFLFVTELAPLTNAV
                     MQSFWFDNRTGIVYMTQARNNGYMLSRLRPNGQFIDSSLIVGGGHGTHNGYRYIDDEL
                     WIYSFILNGNNENTLVRFKYTPNVEISYGKYGMQDVFTGHPEKPYITPVINEKENKIL
                     YRIERPRSQWELENSMNYIEIRSLDDVDKNIDKVLHKISIPMRLTNETQPMQGVTFDE
                     KYLYWYTGDSNPNNRNYLTAFDLETGEEAYQVNADYGGTLDSFPGEFAEAEGLQIYYD
                     KDSGKKALMLGVTVGGDGNRTHRIFMIGQRGILEILHSRGVPFIMSDTGGRVKPLPMR
                     PDKLKNLGMLTEPGLYYLYTDHTVQIDDFPLPREWRDAGWFLEVKPPQTGGDVIQILT
                     RNSYARNMMTFERVLSGRTGDISDWNYVPKNSGKWERVPSFITKMSDINIVGMSFYLT
                     TDDTKRFTDFPTERKGVAGWNLYVEASNTGGFVHRLVRNSVTASAEILLKNYDSKTSS
                     GPWTLHEGRIIS"
     gene            7926..9392
                     /locus_tag="OY092_001977"
     CDS             7926..9392
                     /locus_tag="OY092_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate upper protein"
                     /protein_id="HCX1076907.1"
                     /translation="MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIK
                     NNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQV
                     SVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEA
                     IKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQ
                     KRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGD
                     STQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEW
                     SELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYL
                     NESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKS
                     SRTSLTISNDVYFDLGSQRGSGANANRGTINKIIGVRK"
     gene            9392..9781
                     /locus_tag="OY092_001978"
     CDS             9392..9781
                     /locus_tag="OY092_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2977 domain-containing protein"
                     /protein_id="HCX1076908.1"
                     /translation="MQILVNKRNEIISYAIIGGFEEGIDIENLPENFSQVFRPKAFKY
                     SNGEIVFNEDYPEEKDDLHQQIDSEEQNTVASDDILRKMVASMQKQVVQSTKLSMQVN
                     KQNALMAKQLVTLNKKLEEVKGETENA"
     gene            9774..9938
                     /locus_tag="OY092_001979"
     CDS             9774..9938
                     /locus_tag="OY092_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="HCX1076909.1"
                     /translation="MLKLISPTFEDIKTWYQLKEYSKEDIAWYVDMEVIDKEEYAIIT
                     GEKYPENLES"
     gene            9984..10283
                     /locus_tag="OY092_001980"
     CDS             9984..10283
                     /locus_tag="OY092_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2951 domain-containing protein"
                     /protein_id="HCX1076910.1"
                     /translation="MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDK
                     LDRNFEELRRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLKTIFGI"
     gene            10436..>10527
                     /locus_tag="OY092_001981"
     CDS             10436..>10527
                     /locus_tag="OY092_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HCX1076911.1"
                     /translation="MDRWWLSEYKEVVPMVALLKSLERRRLMIT"
BASE COUNT         3927 a         1408 c         2198 g         2994 t
ORIGIN      
        1 ctcgaaaaaa ctcaagaact tattgataag tatagtgcat tcgatgaaca agaaaagcaa
       61 aacattttaa ctcgaactaa agaaaaaaat gacttgcgaa ttaaaaaaga gcaagaactc
      121 aatcagaaaa tcaaagaatt gaaagaaaaa gctttgagtg atggtcagat ttcagaaaat
      181 gaaagaaaag aaattgaaaa gcttgaaaat caaagacgtg atatcactgt taaagaattg
      241 agtaagactg aaaaagagca agagcgtatt ttagtaagaa tgcaaagaaa cagaaatgct
      301 tattcaatag acgaagcgag caaagcaatt aaagaagcag aaaaagcaag aaaagcaaga
      361 aaaaaagaag tggacaagca atatgaagat gatgtcattg ctataaaaaa taacgtcaac
      421 ctttctaagt ctgaaaaaga taaattgtta gctattgctg atcaaagaca taaagatgaa
      481 gtaagaaaag caaaatctaa aaaagatgct gtagtagatg ttgttaaaaa gcaaaataaa
      541 gatattgata aagaaatgga tttatccagt ggacgtgtat ataaaaatac tgaaaagtgg
      601 tggaatggcc ttaaaagttg gtggtctaac tttagagaag accaaaagaa aaaaagcgat
      661 aaatacgcta aagaacaaga agaaacagct cgtagaaaca gagaaaatat aaagaaatgg
      721 tttggaaatg cttgggacgg cgtaaaaagt aaaactggcg aagcctttag taaaatgggc
      781 agaaatgcta atcattttgg cggcgaaatg aaaaaaatgt ggagcggaat caaagggatt
      841 ccaagcaaat taagttcagg ttggagctca gccaaaagtt ctgtaggata ccacactaag
      901 gctatagcta atagtactgg taaatggttt ggaaaagctt ggcaatctgt taaatcgaca
      961 acaggaagta tttacaatca aactaagcaa aagtattcag atgcttcaga taaagcttgg
     1021 gcgcattcaa aatctatttg gagaggcaca tcaaaatggt ttagcaatgc atataaaagt
     1081 gcaaagggct ggctaacgga tatggctaat aaatctcgcg cgaaatggga taatatttct
     1141 agtacagctt ggtcgaatgc aaaatccgtt tggaaaggaa catcgaaatg gtttagtaac
     1201 tcatacaaat ctttaaaaga ttggactggg gatatgtatt caagagccca cgatcgtttt
     1261 gatgcaattt caagttcggc atggtctaac gctaaatcag tatttaatgg ttttagaaaa
     1321 tggctatcca aaacatatga ttggattaga gatattggta aagacatggg aagagctgcg
     1381 gctgatttag gtaaaaatgt tgctaataaa gctattggcg gtttgaatag catgattggc
     1441 ggtattaata aaatatctaa agccattact gataaaaatc tcatcaagcc aatacctaca
     1501 ttgtctactg gtactttagc gggaaagggt gtagctaccg ataattcggg agcattaacg
     1561 caaccgacat ttgctgtatt aaatgataga ggttctggaa acgccccagg tggtggagtt
     1621 caagaagtaa ttcacagggc tgacggaaca ttccatgcac cccaaggacg agatgtggtt
     1681 gttccactag gagttgggga tagcgtaata aatgctaatg acactctgaa gttacagcgt
     1741 atgggtgttt taccaaagtt tcatggaggt acgaaaaaga aagattggct agaccaactt
     1801 aaaggtaata taggtaaaaa agcaggagaa tttggagcta cagctaaaaa cacagcgcat
     1861 aatatcaaaa aaggtgcaga agaaatggtt gaagcagcag gcgataaaat caaagatggt
     1921 gcatcttggt taggcgataa aatcggcgat gtgtgggatt acgtacaaca tccagggaaa
     1981 ctagtaaata aagtaatgtc aggtttaaat attaattttg gaggcggagc taacgctaca
     2041 gtaaaaatag ctaaaggcgc atactcattg ctcaaaaaga aattagtaga caaagtaaaa
     2101 tcgtggtttg aagatttcgg tggtggaggc gatggaagct atctatttga atatccaatc
     2161 tggcaaagat ttggacgcta cacaggtgga cttaacttta atggcggtcg tcactatggt
     2221 atagactttg gtatgccttc tggaacaaac atttatgctg ttaaaggcgg tatagctgat
     2281 aaagtatgga ctgattacgg tggcggtaat tctatacaaa ttaagaccgg tgctaacgaa
     2341 tggaactggt atatgcattt atctaagcaa ttagtaagac aaggccaacg tattaaagct
     2401 ggtcaactga tagggaaatc aggtgctaca ggtaatttcg ttagaggagc acacttacat
     2461 ttccaattga tgcaagggtc acatccaggg aatgatacag ctaaagatcc agaaaaatgg
     2521 ttgaagtcac ttaaaggtag tggcgttcga agtggttcag gtgttaataa ggctgcatct
     2581 gcttgggcag gcgatatacg tcgtgcagca aaacgaatgg gtgttaatgt tacttcgggt
     2641 gatgtaggaa atattattag cttgattcaa cacgaatcag gaggaaatgc aggtataact
     2701 caatctagtg cgcttagaga catcaacgtt ttacagggca atccagcaaa aggattgctt
     2761 caatatatcc cacaaacatt tagacattat gctgttagag gtcacaacaa tatatatagt
     2821 ggttacgatc agttattagc gttctttaac aacagatatt ggcgctcaca gtttaaccca
     2881 agaggtggtt ggtctccaag tggtccaaga agatatgcga atggtggttt gattacaaag
     2941 catcaacttg ctgaagtggg tgaaggagat aaacaggaga tggttatccc tttaactaga
     3001 cgtaaacgag caattcaatt aactgaacag gttatgcgca tcatcggtat ggatggcaag
     3061 ccaaataaca tcactgtaaa taatgatact tcaacagttg aaaaattgtt gaaacaaatt
     3121 gttatgttaa gtgataaagg aaataaatta acagatgcat tgattcaaac tgtttcttct
     3181 caggataata acttaggttc taatgatgca attagaggtt tagaaaaaat attgtcaaaa
     3241 caaagtgggc atagagcaaa tgcaaataat tatatgggag gtttgactaa ttaatgcaat
     3301 cttttgtaaa aatcatagat ggttacaagg aagaagtaat aacagatttt aatcagctta
     3361 tatttttaga tgcaagggct gaaagtccaa acaccaatga taacagtgta actattaacg
     3421 gagtagatgg tattttaccg ggcgcaatta gttttgcgcc tttttcatta gtattaaggt
     3481 ttggctatga tggtatagat gttatagatt taaatttatt tgagcattgg tttagatctg
     3541 tgtttaatcg cagacatcct tattatgtta ttacttctca aatgcctggt gttaaatatg
     3601 cagtgaatac agctaatgtt acatctaatt taaaagatgg ttcttcaact gaaattgaag
     3661 taagtttaaa tgtttataaa gggtattctg aatcagttaa ttggaccgat agcgagttct
     3721 tattcgactc taattggatg tttgaaaatg gaattcctct tgatttcaca cctaaatata
     3781 ctcatacatc aaatcaattt actatttgga acggttctac tgatacgata aatccacgat
     3841 tcaagcacga tttgaaaata ttaattaatt taaatgcgag tggaggattt gaactggtta
     3901 actatacaac aggtgatatt tttaagtaca acaaaagtat agataaaaac actgattttg
     3961 ttttagatgg tgtgtatgca tatcgagata taaatagagt gggaattgat acaaatagag
     4021 gcattataac attagcgcca ggtaaaaatg aatttaagat taaaggagac gtcagtgata
     4081 ttaaaactac atttaagttt ccttttattt ataggtaggt gatttaatgg attatcatga
     4141 tcatttatca gtaatggatt ttaatgaatt gatttgtgaa aatttactag atgtagatta
     4201 tggttctttt aaagaatatt atgaactgaa tgaagctagg tacatcacct ttacagttta
     4261 tagaactact cataatagtt ttgtttttga tttattgatt tgtgaaaact tcataattta
     4321 tcatggtgaa aaatatacaa ttaagcagac agcgccaaag gttgaaggtg ataaagtttt
     4381 tattgaagtt acggcatatc acataatgta tgaatttcaa aatcactcag tggaatcaaa
     4441 taagcttgat gacgacagta gcgaaactgg taaaacgcca gaatactctt tagatgagta
     4501 cttaagatat ggatttgcaa atcaaaaaac ttcggtcaaa atgacctata aaataattgg
     4561 agattttaag cgaaaagtac cgattgacga attaggtaac aaaaacggct tagaatactg
     4621 taaagaagcg gtagacctgt ttggctgtat aatttaccca aatgatacag agattggttt
     4681 ttattctcct gaaacatttt atcaaagaag cgagaaagtg attcgatatc aatataatac
     4741 tgatactgta tctgcaactg tcagtacatt ggaattaaga acagctataa aagtttttgg
     4801 aaaaaagtat acagctgagg aaaagaaaaa ttataatcct attagaacaa ctgacattaa
     4861 atattcaaat ggttttataa aagaaggtac ttatcgtacc gaaacaattg ggtctaaagc
     4921 tactattaac tttgattgca agtatggtaa tgaaacagtt agatttacaa taaaaaaggg
     4981 ctctcaaggt ggaatatata agttgatttt agacggcaag caaattaagc aaatttcttg
     5041 ttttgctaag tcggttcagt ctgaaacaat agatttaaca aaaaatattg ataaaggcaa
     5101 gcacgtttta gaaatgatat ttttaggaga agaccccaaa aatagaattg atatatcttc
     5161 aaataaaaaa gctaagcctt gtatgtatgt tggaactgaa aaatcaacag tcttaaattt
     5221 aattgctgat aattcaggtc gcaatcaata caaagcaatt gtcgactacg tcgcagatag
     5281 tgcaaagcag tttgggattc gatatgctaa tacgcaaaca aatgaagata tcgaaacaca
     5341 ggataagctg ttagaatttg caaaaaagca aataaatgat actcctaaga ctgaattaga
     5401 tgttaattat ataggttatg aaaaaataga gccaagagat agcgtatttt ttgttcatga
     5461 attaatggga tataacactg aattaaaggt tgttaaactt gataggtcac atccatttgt
     5521 aaacgcaata gatgaagtgt ctttcagcaa tgaaataaaa gatatggtac aaattcaaca
     5581 agcacttaac agacgagtta ttgcacaaga taatagatat aactatcaag caaatcgtat
     5641 aaatcattta tacactagta ctttgaattc tcctttcgag acaatggata tagggagtgt
     5701 attaatataa tggcaacaga agaagttaaa atcaaagcgc tacttgaaaa cgataaacag
     5761 tactttccag ctacacactg gaaagctata aatgggatac cttatgcagg cagtagtgat
     5821 attgatggat tgcctcaaga cggtatcatt tcggtagatg ataaaaataa attagataaa
     5881 ttaaaaatag gcgaagcagg aattattcaa aatagcattg tacagaaatc cccaaacggt
     5941 aaattgtgga aaataacagt tgacgatagt gggaaacttg gtacagtgct attttattag
     6001 aaaggaaggt gcattatgga aaatttgtat ttaataaagg atttgggagc tttagcaggt
     6061 cgagattata gagctaaaga aattcaaaac ctgcaaagaa tagagcaatt tgcgcttggc
     6121 ttgacaacag agtttaagtt gcatcagaaa gctaaaacaa tgcaacactt cgctgagcaa
     6181 atttattata atggtagatc gcaagcagca gtaaacaaat ctttacaaag tcaaattaac
     6241 gcacttgttg tggcaccacg taataacagt gctaatgaga ttgttcaagc tcgagttaat
     6301 gtaaacggcg aaacctttga cacattaaaa gaacatttag acgattggga aaccaaaact
     6361 caaattaata aagaggaaac tataagagaa ttaaataaga ccaaacaaga aattcttgat
     6421 atcgagtatc gttttgaacc tgataagcaa gagtttttat ttgtgacaga acttgcacct
     6481 cttacaaatg cagtaatgca atccttctgg tttgataata gaacaggcat agtatacatg
     6541 acacaagcta gaaataatgg ctatatgcta agtcgtttaa gacctaatgg tcaatttata
     6601 gacagctcat tgattgtagg tgggggtcat ggtacacata acggttatag atatattgat
     6661 gatgagttat ggatttatag ttttatctta aatggtaata atgagaatac attagttcgt
     6721 ttcaagtata cgcctaatgt ggaaattagc tatggcaagt atggtatgca agatgtattt
     6781 acaggacacc cagaaaaacc ctacatcacc cctgtcataa atgaaaaaga aaataaaatt
     6841 ctatacagaa ttgagagacc tagaagtcag tgggaacttg aaaactcaat gaattatata
     6901 gagataagaa gtttagacga tgttgataaa aatattgata aagttttgca taaaatcagt
     6961 atccctatga gactaacaaa cgaaacccaa ccaatgcagg gtgtgacttt tgatgaaaaa
     7021 tacttgtatt ggtatacagg agacagtaat ccaaataata gaaactattt aacggctttc
     7081 gatttagaaa caggagaaga agcgtatcag gttaatgctg actatggtgg aacactagat
     7141 tcatttcctg gcgaatttgc ggaagcagaa ggtttgcaaa tatactatga caaagatagt
     7201 ggtaaaaaag ctttgatgct aggtgttact gtcggtggtg atggaaatag aacacatcgt
     7261 attttcatga ttgggcaaag aggtatttta gaaatacttc actcaagagg cgttcctttt
     7321 atcatgagtg acacaggtgg tagagttaaa cctttaccaa tgaggcctga taaacttaag
     7381 aatcttggga tgttaacaga gccaggtctt tactatttat acactgatca tacagttcaa
     7441 atcgatgatt tcccattacc aagagaatgg cgtgatgcag gttggttctt ggaagttaag
     7501 ccaccacaaa ctggcggtga tgtaattcag atattgacgc gtaatagtta tgcaaggaat
     7561 atgatgactt ttgaaagggt gctttctgga agaactggag acatttcgga ctggaattat
     7621 gtgcctaaaa atagtggtaa atgggagaga gtaccttcat tcatcacaaa aatgtcagat
     7681 attaacatag taggcatgtc gttttattta actacggatg atacaaaacg ttttacagat
     7741 tttccaactg aacgtaaagg ggtagctggt tggaacttat atgtagaagc ttcaaacaca
     7801 ggtggctttg ttcataggct agttcgtaat agtgttacag catctgctga gatactattg
     7861 aaaaattatg atagtaaaac aagttcaggg ccatggactt tacacgaagg gagaattata
     7921 agttaatgag taatttagag aaatctgtag ctataaattt agaaaacaca gcgcattatg
     7981 aaaatatttc aaatctagat ataactttta gaacaggaga gagtgattct tctgttcttc
     8041 tttttaatat cattaaaaat aatcaaccgt tattactgag tgaagaaaat atcaaagcac
     8101 gaatagcgat tcgaggtaaa ggagtaatgg tagttgctcc actagaaata ttagatccat
     8161 ttaaaggtat tttaaaattt caattaccta atgatgtaat taaaagagat ggaagttatc
     8221 aagctcaagt ttcggttgca gaattaggta attcagacgt ggtagttgta gagagaacta
     8281 tcacatttaa cgttgaaaaa agtttgttta gcaagattcc ctctgaaaca aaactacact
     8341 atattgttga gtttcaagaa ttagaaaaaa ctattatgga tcgcgcgaaa gcaatggacg
     8401 aggctataaa aaatggtgag gattatgcga gtctgattga aaaagctaaa gaaaaaggtc
     8461 tatcagatat tcaaatagca aaatcttcaa gtattgatga attaaagcaa cttgctaata
     8521 gccgtatatc tgatttggaa aataaagcgc aagcatattc aagaacattc gatgagcaaa
     8581 agcgatatat ggatgagaaa catgaagcct tcaagcagtc agtgaatagt ggtggtttag
     8641 tcacaagtgg ttctacttca aattggcaaa aagctaagat tactaaagat gatggtaaga
     8701 taatgcagat tactggattt gattttaata atccagaaca aagaataggt gattcaaccc
     8761 aatttattta tgtttcgcaa gctataaatt atccaagaga tgttagtact aacggtactg
     8821 tcgaatattt agtagtaact tcagattaca agcgtatgac ttatcgaccg aacggtacaa
     8881 ataaagtgtt tgttaaaaga aaagaagcgg gttcatggtc tgagtggtca gaattagcta
     8941 ttaatgatta caatacacct tttgaaactg ttcaaagtgc ccaatcaaaa gctaatatgg
     9001 ccgaaagtaa cgctaaatta tacgcagatg acaagtttaa taaaaggtat tcggttattt
     9061 ttgatggaac agcaaatggt gtgggctcta cattgtactt aaatgagagt ttagaccaat
     9121 ttattttatt aattttttat gggacttttc caggtggtga ctttacagag tttggcagtc
     9181 cttttggagg aggaaagatt tcattgaatc cctcaaatct tccagatggt gatggaaatg
     9241 gtggaggtgt ttatgagttt ggattaacta aatctagtcg tacatcttta actatatcaa
     9301 acgatgtcta tttcgactta ggaagtcaaa gaggctctgg tgcgaacgca aatagaggga
     9361 caattaacaa aattatagga gtgagaaaat aatgcaaata ttagttaaca agcgtaatga
     9421 gataatttca tacgctatca ttggcggctt tgaagaaggt attgatattg aaaatttacc
     9481 agaaaatttc tctcaagttt ttagacctaa agcctttaaa tattcaaatg gggaaatagt
     9541 ttttaacgaa gattatccag aagaaaaaga tgacttgcat caacagattg acagtgaaga
     9601 acaaaacaca gtcgcttctg atgacatctt acgaaaaatg gttgctagta tgcagaaaca
     9661 agttgttcaa agtacaaagt tatcgatgca agttaataag caaaatgcac taatggcaaa
     9721 acaacttgtg acacttaata aaaaattaga agaggttaaa ggagagactg aaaatgctta
     9781 aattaatttc accaacattc gaagatatta aaacatggta tcaattgaaa gaatatagta
     9841 aagaagatat agcgtggtat gtagatatgg aagttataga taaagaggaa tatgcaatta
     9901 ttacaggaga aaagtatcca gaaaatctag agtcataggt tataatctta tggcttttta
     9961 atttgaataa agtgggtggt gtaatgtttg gatttaccaa acgacacgaa caagattggc
    10021 gtttaacgcg attagaagaa aatgataaga ctatgtttga aaaattcgac agaatagaag
    10081 acagtctgag aacgcaagaa aaaatttatg acaagttaga tagaaatttc gaagaactaa
    10141 ggcgtgacaa agaagaagat gaaaaaaata aagagaaaaa tgctaaaaat attagagaca
    10201 tcaagatgtg gattctagga ttaataggga cgattctaag tacatttgtt atagccttgt
    10261 taaaaactat ttttggcatt taaaggaggt gatcaccatg cttaagggaa ttttaggata
    10321 tagcttttgg tcgtgtttct ggtttagtaa gtgtaagtaa tagttaagag tcagtgcttc
    10381 ggcactgact ttttatttat tgttgtaatt atggtaatat gcagaagtga gcaagttgga
    10441 tagatggtgg ctatctgagt ataaggaggt ggtgcctatg gtggcattac tgaaatcttt
    10501 agaaaggaga cgcctaatga ttacaat
//
LOCUS       DAKPJH010000088        10371 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.088, whole genome shotgun sequence.
ACCESSION   DAKPJH010000088 DAKPJH010000000
VERSION     DAKPJH010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10371
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.088"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            216..566
                     /locus_tag="OY092_001982"
     CDS             216..566
                     /locus_tag="OY092_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002502216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076912.1"
                     /translation="MKTITQELKQYITHLFQLSNNEAWECEALEEAAENILPERFIND
                     SPLVHLTLETYTYYNDELHELSIYPFLMYANNQLISVGYLDHFDMDFLYLTDTQNIII
                     DERHLLKQGGQDHE"
     gene            653..964
                     /locus_tag="OY092_001983"
     CDS             653..964
                     /locus_tag="OY092_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF960 domain-containing protein"
                     /protein_id="HCX1076913.1"
                     /translation="MKINRYITRGINESIPLDLQILLWHMVEKKDNQPHTDYLHIFKL
                     QEDENILSITHEQEQPTYKLEYHYTNYEKNQNALPKKVYVIREDDVDAFYYVMLLPEE
                     Y"
     gene            979..1485
                     /locus_tag="OY092_001984"
     CDS             979..1485
                     /locus_tag="OY092_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001092170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HCX1076914.1"
                     /translation="MNTIKSTIHTEAIFSDDEQHRYLLKKTWDEKKAACTVITMYPHL
                     DGVLSLDLTTVLILNQLANSERYGAVYLVNLFSNIKTPENLKHIKDPYDEHTDIHLMK
                     AISESDTVILAYGAYAKRPVVIDRVEQVMEMLKPHKKKVKKLINPVTNEIMHPLNPKA
                     RQKWILKS"
     gene            1537..3144
                     /locus_tag="OY092_001985"
                     /pseudo
     CDS             1537..3144
                     /locus_tag="OY092_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011274780.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
     gene            complement(3135..3395)
                     /locus_tag="OY092_001986"
     CDS             complement(3135..3395)
                     /locus_tag="OY092_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3387 domain-containing protein"
                     /protein_id="HCX1076915.1"
                     /translation="MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
                     SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ"
     gene            complement(3367..4353)
                     /locus_tag="OY092_001987"
     CDS             complement(3367..4353)
                     /locus_tag="OY092_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer MecR1"
                     /protein_id="HCX1076916.1"
                     /translation="MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVL
                     VSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFET
                     SNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKK
                     HITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQ
                     LYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKS
                     QHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISSFT"
     gene            4450..6459
                     /gene="mecA"
                     /locus_tag="OY092_001988"
     CDS             4450..6459
                     /gene="mecA"
                     /locus_tag="OY092_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase MecA"
                     /protein_id="HCX1076917.1"
                     /translation="MMKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFK
                     QVYKDSSYISKSDNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKI
                     KTNYGNIDRNVQFNFVKEDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNN
                     VELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTV
                     KKMDEYLSDFAKKFHLTTNETESRNYPLEKATSHLLGYVGPINSEELKQKEYKGYKDD
                     AVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQ
                     KSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPL
                     LNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVV
                     NGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKN
                     LDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISK
                     ENINLLTDGMQQVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKD
                     NPNMMMAINVKDVQDKGMASYNAKISGKVYDELYENGNKKYDIDE"
     gene            complement(6505..6933)
                     /locus_tag="OY092_001989"
     CDS             complement(6505..6933)
                     /locus_tag="OY092_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HCX1076918.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(7030..7773)
                     /locus_tag="OY092_001990"
     CDS             complement(7030..7773)
                     /locus_tag="OY092_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HCX1076919.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
     gene            complement(8650..9021)
                     /locus_tag="OY092_001991"
                     /pseudo
     CDS             complement(8650..9021)
                     /locus_tag="OY092_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016912861.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase family
                     protein"
     gene            9075..9749
                     /locus_tag="OY092_001992"
     CDS             9075..9749
                     /locus_tag="OY092_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS257 family transposase"
                     /protein_id="HCX1076920.1"
                     /translation="MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHH
                     STVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDI
                     WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
                     YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEI
                     SIMLAS"
     gene            complement(9781..10020)
                     /locus_tag="OY092_001993"
     CDS             complement(9781..10020)
                     /locus_tag="OY092_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076921.1"
                     /translation="MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIV
                     YDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI"
BASE COUNT         3787 a         1701 c         1531 g         3352 t
ORIGIN      
        1 accctatcat caatacttat aaataatgag ttgattgttt gtcaaaatag gcggaatttc
       61 aggatttcct tggcatacca acgtttgtag cgggttttta tatggaattt tctcttattc
      121 ccaccgggat tcgtaataaa tgacaaatca aatatatatt atctcaatga tgtatatgaa
      181 ctacatcact attacactat ctaggaggca ataatatgaa aaccatcact caagaactca
      241 aacaatatat aacccaccta ttccaactat ctaataacga agcttgggaa tgtgaagcgc
      301 tggaggaagc agcagaaaat attctaccgg aacgttttat taatgattct ccactggtac
      361 atctcacact cgagacttat acctactata atgatgaact acatgagcta agtatctatc
      421 catttctaat gtatgccaat aaccaactca tcagtgtcgg atacttagac cattttgaca
      481 tggactttct gtaccttaca gatactcaaa atatcattat tgatgaacgt catttactaa
      541 aacaaggagg tcaggaccat gaataattgg atcatagttg ctcaattatc cgtcacagtt
      601 atcaacgaaa tcatcgacat catgaaagaa aagcagaagg gagggaaata gcatgaaaat
      661 caatcgatac atcacaagag gaattaatga aagtattcca ctagaccttc aaatcttact
      721 ttggcacatg gtagaaaaaa aagataacca gcctcataca gattacctac acatttttaa
      781 attacaagaa gatgagaata tactctcaat cacacatgaa caagaacaac ccacatacaa
      841 attggaatat cactatacaa actatgaaaa aaatcaaaat gcattaccta agaaagtcta
      901 cgtcattcgt gaagatgacg tggacgcttt ttattatgtg atgcttttac cagaagaata
      961 ctaaaggaag tgacgatgat gaatacaatc aaaagtacga tacacacaga agccatattt
     1021 agcgatgatg aacagcaccg ctatttactc aagaaaacat gggatgaaaa gaaagctgca
     1081 tgcacagtga taacgatgta tcctcattta gacggtgtat tatcactcga tctcacaact
     1141 gttcttatcc tcaaccaatt agccaattca gaacgatacg gtgctgtata tcttgtaaat
     1201 ctattctcta atattaaaac tccagagaat cttaaacata tcaaagatcc atacgatgag
     1261 cacacagata ttcatttgat gaaagcgatt agtgaaagtg acacagtgat tcttgcttat
     1321 ggtgcctatg cgaagcgacc agttgttatc gaccgtgtcg aacaagtgat ggaaatgtta
     1381 aaacctcata aaaagaaagt aaaaaagctc atcaatccag taacaaatga aattatgcat
     1441 ccactcaacc ctaaggcacg tcaaaaatgg attttgaaat catagcaaat acatggaggt
     1501 caatatggaa acaaaacaaa tcaacatcgt tttactgtaa atgatattgt tgaaacaatt
     1561 cctgacaatg aattcgacga attcagacat caccgtggtg caacttcgta ccatcctaaa
     1621 atgatgttaa aagtgattct atatgcctac acacaatctg tattctcagg tcgtaaaata
     1681 gaaaaaatgc ttaatgatag catccgaatg atgtggctat cacaaaatca aaaaccttct
     1741 tataaaacaa ttaatcaatt tagagtaaat ccaaaagtag atgctttatt agaatcttta
     1801 tttattcaat tttacagtca gtgtgtaaaa caaaatctta tagatgataa agctattttt
     1861 attgatggta caaaaattga agcaaatgcc aatcgatata catttgtatg gaaaaagagt
     1921 attcaaaacc atgaatcaaa gatgaatgag gattctaaag ccctctacca tgaattggta
     1981 accaataaaa tcataccgga aattaaagaa gatcatgata atgaattaac aaaagaagaa
     2041 atagatttga ttggtagtca cttagataaa gaaatcgaag atttaaacca acatatcaac
     2101 aatgaaaaat gtactaaaac aagaaaacaa atacgtctca aaagaactaa aatcaaaaaa
     2161 tacaaaaagc aaatcaatga ttattttgag cgaaagtatc gatacgaatt tcaaaaatct
     2221 attttaaagg atagaaatag ttattctaag acagattatg atgcgacatt tatgagaatg
     2281 aaagaagatc acatgaaaaa tggacaactt aagccagggt ataatttaca aatagcaaca
     2341 aattcccaat ttgttttatc ttataatgtg tatcaaaatc caacggatac tagaacgatg
     2401 attccatttt taaattcaat tcaagagacc tacggtcatt tacctgaata tattgtagct
     2461 gatgcaggtt atggtagtga atcaaattat aaggcaatta tagatgactt taatcgaacg
     2521 ccactcataa catatggaat gtttataaaa gataaaacta aaaaatataa aagtgacatc
     2581 tttaatactc aaaattggaa ctatgacgaa attaatgacg aattcatttg tccgaataat
     2641 aaacggctag gttttaaaag atatgcctat cgtcatgata agtatggtta taagcgagac
     2701 ttcaaattat atgaatgtga tgattgttca gaatgtcctc tgaaaaatca atgtatgaac
     2761 ttcaattcaa aaacaaacaa aaaaataatg aagaattata actgggaata ttttaaatcc
     2821 caaattaaca aaaagctttc agaaccagaa acaaaaaata tctacagtca aagaaaaatt
     2881 gatgtggaac ctgtttttgg atttatgaag gctattttgg gtttcactcg gatgtctgtc
     2941 cgaggactca ataaagtcaa aagagaactt ggttttgtat taatggcact taatataaga
     3001 aaagtagtag ctcaacgagc tgaaaataat caaaaaattt ataaaaaaga caatttctat
     3061 attatttcaa tagaaattgt cttttttcac ttatccaaga actttatgtc ccggactcat
     3121 tatgatttat ttttttattg ctgacttgcc attaattctg cttgctctac aacttgttcc
     3181 acagccattt tttgaagatc tggtggatag ccatatttct ttaataggcg tctaacttga
     3241 actctcattt tagctttagc actgtctcgt ttagaccaat caacactcat gttatcctta
     3301 actgttttag ttaactcatg tgcaatggct cttaactctt tatcgcccaa agcttcttta
     3361 gctgtttcat gtgaagctcg atatactaca tacaatatac gcaacaatac gcttgtttcg
     3421 attaggttta ggcattgaat cataaagtgc aatatactta acacgttctt taatatttga
     3481 attaaaacct agtaaatatt gtgctgccac attatttatg tgctgagatt ttaaaataga
     3541 gcattttaat atcgattcac cataacgtat atgttcatgg cgattcaaaa tttttaaaac
     3601 gtttctatca catacttttt cacagtcatt gtccatcatt gttttactta tatatagtgc
     3661 aggattaaac cagaatatca ttttaaaaac aacataaagc tggttgaata ttaagtcatg
     3721 acttttcaca tgtgatagtt catgtagaat aatatattca atttctttgt cattcatggt
     3781 ttcgactacg acagttggta gtacaatttg ggatttcact aaaccaaata ccatcggatt
     3841 atcaatgttt gaactataac taattgttat atgctttttg tagaactgca tcttactttg
     3901 acatacttta agtcgttcat taagatatga cgattccaat gacgaacttt taataacatc
     3961 aatttgtcgg aatgccttaa tcatataaaa taagcacaac aaactaccaa atacccatat
     4021 caaaagaatc atatacgtta tatttgaggt ctcaaactga ttaacattaa ttgctaagtc
     4081 tttcgtaaca gatgattgtt gaccatctaa catatgacta accgaagaag tcgtgtcaga
     4141 tacatttcga ttcatcatat cttttgaaaa tgtaaaattc gatattttgt aaaatggtat
     4201 taatggaatt aacgtggaga cgagcactaa taaccaaatc ttatgtgaca taatattttg
     4261 agtatatttt atatagagca ttctcactaa aaaaattaca catatcgtga gcaatgaact
     4321 gattatactt aacattaaaa aagatgataa caccttctac acctccatat cacaaaaatt
     4381 ataacattat tttgacataa atactacatt tgtaatatac tacaaatgta gtcttatata
     4441 aggaggatat tgatgaaaaa gataaaaatt gttccactta ttttaatagt tgtagttgtc
     4501 gggtttggta tatattttta tgcttcaaaa gataaagaaa ttaataatac tattgatgca
     4561 attgaagata aaaatttcaa acaagtttat aaagatagca gttatatttc taaaagcgat
     4621 aatggtgaag tagaaatgac tgaacgtccg ataaaaatat ataatagttt aggcgttaaa
     4681 gatataaaca ttcaggatcg taaaataaaa aaagtatcta aaaataaaaa acgagtagat
     4741 gctcaatata aaattaaaac aaactacggt aacattgatc gcaacgttca atttaatttt
     4801 gttaaagaag atggtatgtg gaagttagat tgggatcata gcgtcattat tccaggaatg
     4861 cagaaagacc aaagcataca tattgaaaat ttaaaatcag aacgtggtaa aattttagac
     4921 cgaaacaatg tggaattggc caatacagga acagcatatg agataggcat cgttccaaag
     4981 aatgtatcta aaaaagatta taaagcaatc gctaaagaac taagtatttc tgaagactat
     5041 atcaaacaac aaatggatca aaattgggta caagatgata ccttcgttcc acttaaaacc
     5101 gttaaaaaaa tggatgaata tttaagtgat ttcgcaaaaa aatttcatct tacaactaat
     5161 gaaacagaaa gtcgtaacta tcctctagaa aaagcgactt cacatctatt aggttatgtt
     5221 ggtcccatta actctgaaga attaaaacaa aaagaatata aaggctataa agatgatgca
     5281 gttattggta aaaagggact cgaaaaactt tacgataaaa agctccaaca tgaagatggc
     5341 tatcgtgtca caatcgttga cgataatagc aatacaatcg cacatacatt aatagagaaa
     5401 aagaaaaaag atggcaaaga tattcaacta actattgatg ctaaagttca aaagagtatt
     5461 tataacaaca tgaaaaatga ttatggctca ggtactgcta tccaccctca aacaggtgaa
     5521 ttattagcac ttgtaagcac accttcatat gacgtctatc catttatgta tggcatgagt
     5581 aacgaagaat ataataaatt aaccgaagat aaaaaagaac ctctgctcaa caagttccag
     5641 attacaactt caccaggttc aactcaaaaa atattaacag caatgattgg gttaaataac
     5701 aaaacattag acgataaaac aagttataaa atcgatggta aaggttggca aaaagataaa
     5761 tcttggggtg gttacaacgt tacaagatat gaagtggtaa atggtaatat cgacttaaaa
     5821 caagcaatag aatcatcaga taacattttc tttgctagag tagcactcga attaggcagt
     5881 aagaaatttg aaaaaggcat gaaaaaacta ggtgttggtg aagatatacc aagtgattat
     5941 ccattttata atgctcaaat ttcaaacaaa aatttagata atgaaatatt attagctgat
     6001 tcaggttacg gacaaggtga aatactgatt aacccagtac agatcctttc aatctatagc
     6061 gcattagaaa ataatggcaa tattaacgca cctcacttat taaaagacac gaaaaacaaa
     6121 gtttggaaga aaaatattat ttccaaagaa aatatcaatc tattaactga tggtatgcaa
     6181 caagtcgtaa ataaaacaca taaagaagat atttatagat cttatgcaaa cttaattggc
     6241 aaatccggta ctgcagaact caaaatgaaa caaggagaaa ctggcagaca aattgggtgg
     6301 tttatatcat atgataaaga taatccaaac atgatgatgg ctattaatgt taaagatgta
     6361 caagataaag gaatggctag ctacaatgcc aaaatctcag gtaaagtgta tgatgagcta
     6421 tatgagaacg gtaataaaaa atacgatata gatgaataac aaaacagtga agcaatccgt
     6481 aacgatggtt gcttcactgt tttattatga attattaata agtgctgtta cttctccctt
     6541 aaatacaatt tcttcatttt cattgtatgt tgaaagtgac actgtaacga gtccattttc
     6601 tttttttatg gatttcttat ttgtaatttc agcgataacg tacaatgtat tacctgggta
     6661 tacaggttta ataaatttaa cgttattcat ttgtgttcct gctacaactt cttctccgta
     6721 tttaccttct tctacccata atttaaatga tattgaaagt gtatgcatgc cagatgcaat
     6781 gataccttta aatctacttt gttctgcttt ttctttatct atatgcatat attgaggatc
     6841 aaaagttgtt gcaaattgga taatttcttc ttctgtaata tgaaggcttt ttgttttgaa
     6901 tgtttctcct actataaaat catcgtattt catatatgtc tctctttctt attcaaatta
     6961 attttttagt atgtaacatg ttaaaggtaa gtctaccgtc actgaaacgt aagactcacc
     7021 tctaactttc tattgagaca aatgcaccat tttatctgca ttgtctgtaa agataccatc
     7081 aactccccaa ttagcaagtt ggtttgcacg tgctggtttg tttacagtcc atacgttcaa
     7141 ttcataaccc gcttctttta ccatttttac ttttgcttta gtaagtttgg catcttcagt
     7201 gtttactatt ttagcattac agtaatctaa aagtgttctc cagtcttcac gaaacgaagt
     7261 tgtatggaat ataactgctc tgttatattg tggcatgatt tcttctgcaa gtttaacaag
     7321 cacaacatta aagcttgaaa tgagcacttc ttgattctga tttaagtttg ttaattgttc
     7381 ttccacttgc ttaaccatac ttttagaaag tgctagtcca ttcggtccag taataccttt
     7441 taattctaca tttaaattca tattatattc atttgctatt tttactacat catcgaaagt
     7501 tggcaaatgt tcatctttga atttttcacc aaaccaagat cctgcagaag catctttaat
     7561 ttcatcataa ttcaattcag ttatttcccc ggacatattt gtagtccgtt ctaaataatc
     7621 atcatgaatg ataatcagtt gttcatcttt tgtaattgca acatctaact ccaaccagtt
     7681 tataccttct acttctgaag cagctttaaa tgatgcaatt gtattttccg gagctttact
     7741 aggtaatcct ctatgtccat atacagttag catattacct ctccttgcat ttttattttt
     7801 ttaattaacg taactgtatt atcacattaa tcgcactttt atttccatta aaaagagatg
     7861 aatatcataa ataaagaagt cgatagattc gtattgatta tggagttaat ctacgtctca
     7921 tctcattttt aaaaaatcat ttatgtccca agctccattt tgtaatcaag tctagttttt
     7981 ctgtacccct tatctgcaat tttacttagg attgctttta acttacccct tatcagcaat
     8041 tttactgaga actgctttta acgcacctct tatctgcaat tttgcctaga actgctttta
     8101 acgtacctct tatctgcaat tttactgaga actgctttta acttacccct tatcagcaat
     8161 tttgcatgga attgctttta acgtacctct tatctgcaat tttacttaga actgctttta
     8221 acaaacctct tatctgcaat tttacttaga actgctttta acgtacctct tatctgtaat
     8281 tttactgaga actgctttta acaaacctct tatctgcaat tttacttaga actgctttta
     8341 acaaacctct tatctgcaat tttacttaga attgctttta ctattcctct tattagtata
     8401 atctcagtaa gaatgcgtat aaaaatgaaa attacaaccg attttgtaag tgctgacgcc
     8461 tgagggaata gtatgtgcga gagactaatg gctcgagcca tacccctagg caagcatgca
     8521 cgtacaaaat cgtaagataa aaaaataagc atatcactgt aaactttaaa aaatcagttt
     8581 agtgatatgc ttatttattt cgagttagga tttatgtccc aagctcatca agcacaatcg
     8641 gccactagtt tatttctcta tcttatatgt tctgatatgg tcttctatac tgtataagta
     8701 tacttttgaa tatggatctt gtgtcaattc acgttcgaaa tcaaattctt gattatcaaa
     8761 tctgttaaag aatgtttcgt attcttcgac tgataattgc tctctagatt ctagcatatt
     8821 taagtgtttc tctttatcta atgctttgtc atatccttta acgattgaac cactaaagat
     8881 ttctcctact gctcctgaac cataactaaa tagacatact ttctcttctg gttggaatgt
     8941 gtggttctgt aataacgaaa ttaaacttaa gtataatgat cctgtataaa tgttaccaac
     9001 atctctattc cataatacgg ttctgttgca aagttgaatt tatagtataa ttttaacaaa
     9061 aaggagtctt ctgtatgaac tatttcagat ataaacaatt taacaaggat gttatcactg
     9121 tagccgttgg ctactatcta agatatacat tgagttatcg tgatatatct gaaatattaa
     9181 gggaacgtgg tgtaaacgtt catcattcaa cggtctaccg ttgggttcaa gaatatgccc
     9241 caattttgta tcaaatttgg aagaaaaagc ataaaaaagc ttattacaaa tggcgtattg
     9301 atgagacgta catcaaaata aaaggaaaat ggagctattt atatcgtgcc attgatgcag
     9361 agggacatac attagatatt tggttgcgta agcaacgaga taatcattca gcatatgcgt
     9421 ttatcaaacg tctcattaaa caatttggta aacctcaaaa ggtaattaca gatcaggcac
     9481 cttcaacgaa ggtagcaatg gctaaagtaa ttaaagcttt taaacttaaa cctgactgtc
     9541 attgtacatc gaaatatctg aataacctca ttgagcaaga tcaccgtcat attaaagtaa
     9601 gaaagacaag gtatcaaagt atcaatacag caaagaatac tttaaaaggt attgaatgta
     9661 tttacgctct atataaaaag aaccgcaggt ctcttcagat ctacggattt tcgccatgcc
     9721 acgaaattag catcatgcta gcaagttaag cgaacactga catgataaat tagtggttag
     9781 ctatattttt ttactttgca acagaaccga aaataatctc ttcaatttat ttttatatga
     9841 atcctgtgac tcaatgattg taatatctaa agatttcagt tcatcataga caatgttctt
     9901 ttcaacattt tttatagcaa attgattaaa taaattctct aatttctccc gtttgatttc
     9961 actaccatag attatattat cattgatata gtcaatgaat aatgacaaat tatcactcat
    10021 aacagtccca acccctttat tttgatagac taattatctt catcattgta aaacaaatta
    10081 caccctttaa atttaactca acttaaatat cgacaaatta aaaaacaata aaattacttg
    10141 aatattattc ataatatatt aacaacttta ttatactgct ctttatatat aaaatcatta
    10201 ataattaaac aagccttaaa atatttaact tttttgtgat tattacacat tatcttatct
    10261 gctctttatc accataaaaa tagaaaaaac aagattccta aagaatatag gaatcttgtt
    10321 tcagactgtg gacaaactga ttttttatca gttagcttat ttagaaagtt t
//
LOCUS       DAKPJH010000089        10230 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.089, whole genome shotgun sequence.
ACCESSION   DAKPJH010000089 DAKPJH010000000
VERSION     DAKPJH010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10230
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.089"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..543)
                     /locus_tag="OY092_001994"
     CDS             complement(<1..543)
                     /locus_tag="OY092_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HCX1076922.1"
                     /translation="MIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQL
                     KVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSL
                     NQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKND
                     YPSGYSHGSIRFKYYDLNEGF"
     gene            complement(865..1344)
                     /gene="rlmH"
                     /locus_tag="OY092_001995"
     CDS             complement(865..1344)
                     /gene="rlmH"
                     /locus_tag="OY092_001995"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HCX1076923.1"
                     /translation="MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAP
                     ENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSD
                     FVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK"
     gene            complement(1712..4030)
                     /gene="adsA"
                     /locus_tag="OY092_001996"
     CDS             complement(1712..4030)
                     /gene="adsA"
                     /locus_tag="OY092_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored adenosine synthase AdsA"
                     /protein_id="HCX1076924.1"
                     /translation="MKALLLKTSVWLVLLFSAMGLWQVSSAAEQHTPMKAHAVTTIDK
                     ATTDRQLVLPTKEAAHQSGEEAATNVSASAQGTADDTNNKVTSNAPSNKPSTAVSTTV
                     NETHDVDAQQASTQKPTQSATFKLSNAKTASLSPRMFAANAPQTTTHKILHTNDIHGR
                     LAEEKGRVIGMAKLKTVKEQEKPDLILDAGDAFQGLPLSNQSKGEEMAKAMNAVGYDA
                     MAVGNHEFDFGYDQLKKLEGMLDFPMLSTNVYKDGKRAFKPSTIVTKNGIRYGIIGVT
                     TPETKTKTRPEGIKGVEFRDPLQSVTAEMMRIYKDVDTFVVISHLGIDPSTQETWRGD
                     YLVKQLSQNPQLKKRITVIDGHSHTVLQNGQIYNNDALAQTGTALANIGKVTFNYRNG
                     EVSNIKPSLINVKDVENVTPNKALAEQINQADQTFRAQTAEVIIPNNTIDFKGERDDV
                     RTRETNLGNAITDAMEAYGVKNFSKKTDFAVTNGGGIRASIAKGKVTRYDLISVLPFG
                     NTIAQIDVKGSDVWTAFEHSLGAPTTQKDGKTVLTANGGLLHISDSIRVYYDMNKPSG
                     KRINAIQILNKETGKFENIDLKRVYHVTMNDFTASGGDGYSMFGGPREEGISLDQVLA
                     SYLKTANLAKYDTTEPQRMLLGKPAVSEQPAKGQQGSKGSESGKDTQPIGKDKVMNPA
                     KQPATGKVVLLPTHRGTVSSGAEGSDCALEGTAVSSKSGKQLTKMSASKGSGHEKQLP
                     KTGTNQSSSPAAIFVLVAGIGLIATVRRRKAS"
     gene            complement(4256..5056)
                     /locus_tag="OY092_001997"
     CDS             complement(4256..5056)
                     /locus_tag="OY092_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCX1076925.1"
                     /translation="MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFS
                     QIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQK
                     FIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
                     GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYL
                     SHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI"
     gene            complement(5452..6240)
                     /locus_tag="OY092_001998"
     CDS             complement(5452..6240)
                     /locus_tag="OY092_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HCX1076926.1"
                     /translation="MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVN
                     FQQEEIRVPASILNKSVKGIQLEQITGRSKDFSSKAKGDSDLSTSDSGKLLNANISQS
                     VKVSDNNLKDLKDYVNKRVFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFKI
                     EDNKATSYKQSMMDDIKPTDGADKKHQVISVRKAIEALYYNRYLKKGDEVINARLGYY
                     SVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH"
     gene            complement(6241..7575)
                     /locus_tag="OY092_001999"
     CDS             complement(6241..7575)
                     /locus_tag="OY092_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076927.1"
                     /translation="MNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKS
                     ETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHV
                     RRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDN
                     IVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAP
                     SKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKY
                     HYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGY
                     PTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDI
                     NFEKVTNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE"
     gene            complement(7568..9394)
                     /gene="walK"
                     /locus_tag="OY092_002000"
     CDS             complement(7568..9394)
                     /gene="walK"
                     /locus_tag="OY092_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HCX1076928.1"
                     /translation="MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNNLEKELLDN
                     FKKNITQYAKQLEISIEKVYDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIII
                     ATTKQSNRSLINQKANDSSVQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKV
                     IGNIYIESKINDVYNQLNNINQIFIVGTAISLLITVILGFFIARTITKPITDMRNQTV
                     EMSRGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGI
                     IATDRRGRIRIVNDMALKMLGMAKEDIIGYYMLSVLSLEDEFKLEEIQENNDSFLLDL
                     NEEEGLIARVNFSTIVQETGFVTGYIAVLHDVTEQQQVERERREFVANVSHELRTPLT
                     SMNSYIEALEEGAWKDEELAPQFLSVTREETERMIRLVNDLLQLSKMDNESDQINKEI
                     IDFNMFINKIINRHEMSAKDTTFIRDIPKKTIFTEFDPDKMTQVFDNVITNAMKYSRG
                     DKRVEFHVKQNPLYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGL
                     AISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIEDGDWDE"
     gene            complement(9407..10108)
                     /locus_tag="OY092_002001"
     CDS             complement(9407..10108)
                     /locus_tag="OY092_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1076929.1"
                     /translation="MARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYE
                     EEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTK
                     PFSTRELIARVKANLRRHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTH
                     REFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEY
                     IVTRRGVGYFLQQHE"
BASE COUNT         2866 a         2021 c         1556 g         3787 t
ORIGIN      
        1 gaatccttca ttcaaatcat aatatttgaa tcttattgat ccatgagaat atcctgatgg
       61 ataatcattt tttaaatcat aagatgaatc tttattttct gcgtaataaa atcttccagt
      121 attaaattca tttgatgtaa tatatttatt gagttcggaa gataaagtta atgctctttg
      181 ttttgcagca tttttatccc gcggaaacat atcacttatc tttgaccatc cttgattcaa
      241 agataagtat atgccttctc cttccggatg aaaaagatat accaaataat atccatcctt
      301 tgtttctttt gttatattct catcatatat tgaaatccaa ggaactttac tatagttccc
      361 agtagcaacc ttccctacaa ctgaatattt atcttctttt atatgcactt ttaactgctt
      421 gggtaactta tcatggacta aagttttata tagatcacct ttatcccaat cagatttttt
      481 aactacatta ttggtacgtt tctctttaat taatttaagg acctgcataa agttgtctat
      541 catttgaaat tccctcctat tataaaatat attatgtctc attttcttca atatgtactt
      601 atttatattt taccgtaatt tactatattt agttgcagaa agaattttct caaagctaga
      661 actttgcttc actataagta ttcagtataa agaatatttc gctattattt acttgaaatg
      721 aaagactgcg gaggctaact atgtcaaaaa tcatgaacct cattacttat gataagcttc
      781 ttaaaaacat aacagcaatt cacataaacc tcatatgttc tgatacattc aaaatccctt
      841 tatgaagcgg ctgaaaaaac cgcatcattt atgatatgct tctccacgca taatcttaaa
      901 tgctctatac acttgctcaa ttaacacaac ccgcatcatt tgatgtggga atgtcatttt
      961 gctgaatgat agtgcgtagt tactacgttg taagacgtcc ttgtgcaggc cgtttgatcc
     1021 gccaatgacg aatacaaagt cgctttgccc ttgggtcatg cgttggttca attcttgggc
     1081 caatccttcg gaagatagca tctttccttg tatttctaat gtaatgactg ttgattgtgg
     1141 tttgattttg gctagtattc gttggccttc tttttctttt acttgctcaa tttctttgtc
     1201 gctcatattt tctggtgctt tttcgtctgg aacttctatg atgtctatct tggtgtatgg
     1261 gcctaaacgt ttttcatatt ctgctatggc ttgcttccaa tatttctctt ttagtttccc
     1321 tacagctaaa atggtgattt tcatgtcgtt tggtcctcca aattgttatc aactttccag
     1381 ttatccacaa gttattaact tgttcacact gttccctctt attataccaa gtttttttac
     1441 agtttttgat attttcctga catttatgcc cggtttttag tgtataacct gtgtatttgt
     1501 ggataactct gtgggcattg tgggtatttc tctttaaatt gtacacaatt ctggataact
     1561 atccccattt ctgtggataa ataccttgat gtcttattac ttatccccgt ttttatttcc
     1621 catatttatc aacggttata gcttttttcc ataaaaaaac actaccgtac ctcttattta
     1681 agaaatacag tagtattgtt ttcaatatat tttagctagc ttttctacgt cgtacagttg
     1741 cgattaaacc tatacctgct actaatacaa atatcgctgc tgggcttgaa ctttgattag
     1801 ttccagtttt tggtaactgt ttctcatgcc cgctaccttt agacgctgac attttagtca
     1861 attgtttccc actcttactt gatacagcag ttccttctaa tgcgcaatca gaaccttctg
     1921 caccgctact aacagttcct ctatgcgttg gtaacaacac aactttacct gtcgctggtt
     1981 gtttcgctgg attcatcact ttgtctttac caattggttg tgtatcttta ccagactcac
     2041 tacctttgct accttgttgt cctttagctg gttgttcact tactgctggt ttacctaata
     2101 acatacgttg tggttctgtc gtatcatact tagctaagtt agctgttttt aaataacttg
     2161 ctagtacttg atctaatgaa ataccttctt ctctagggcc accgaacata ctatatccgt
     2221 cgccacctga tgctgtgaag tcattcatcg ttacgtgata tacacgtttt aaatcaatat
     2281 tttcaaactt acctgtctct ttatttaaaa tttgaatagc gttaattcgt ttgccagatg
     2341 gtttattcat atcatagtaa acacggattg aatcagagat atgtagtaaa ccaccattcg
     2401 ctgttaacac tgtcttacca tctttttgtg ttgttggtgc gcctaaacta tgttcgaaag
     2461 cagtccagac gtctgaacct tttacatcaa tttgcgcaat cgtatttcca aatggtaata
     2521 ctgagattaa atcatagcgt gtcaccttac ctttggcgat agaggcgcga atacctccac
     2581 catttgtcac ggcaaagtca gtctttttag agaaattctt aacgccatat gcttccatag
     2641 catctgtaat cgcgtttcct aaatttgttt cacgcgttct aacgtcatct ctttctcctt
     2701 tgaaatcaat ggtattgttt ggaataatta cctctgcagt ttgtgctcta aatgtttgat
     2761 cagcttgatt aatttgttca gctaatgctt tgttcggtgt tacattttca acgtctttaa
     2821 cattaatcaa tgacggttta atatttgata cctctccatt gcggtaatta aatgtaacct
     2881 taccgatatt cgcaagtgct gtacctgttt gtgctaatgc atcattgtta taaatttgac
     2941 cattttgaag tacggtatgt gaatgaccat caatgactgt aatacgtttc ttcaattgtg
     3001 gattttgact taattgtttc actaagtaat cgccacgcca tgtttcttgt gttgaaggat
     3061 caatacctaa atgtgatata acaacaaatg tatctacgtc tttataaata cgcatcattt
     3121 ccgctgtcac actttgtaat ggatctctaa attcaacacc tttaatgcct tcaggtcttg
     3181 ttttcgtctt tgtttctggt gtcgttacgc caataattcc ataacgaata ccatttttcg
     3241 ttacaatcgt tgaaggctta aatgcgcgtt ttccatcttt ataaacgtta gtacttaaca
     3301 tcgggaagtc taacataccc tctaactttt tcaactggtc gtatccaaag tcaaattcgt
     3361 ggttacccac tgccatagca tcataaccta ctgcattcat cgctttagcc atttcttcac
     3421 ctttagactg gtttgaaagt ggtaaacctt ggaaagcgtc tcctgcgtct aaaattaaat
     3481 caggcttttc ttgttctttt actgttttta atttagccat acctatgaca cgcccttttt
     3541 cttcggctag tcggccatgg atatcatttg tatgtaatat tttatgtgtt gttgtttgtg
     3601 gtgcattagc agcaaacatt cgtggtgaaa gtgatgctgt tttagcattt gataatttga
     3661 atgttgctga ttgagttggt ttttgtgttg aggcttgttg tgcatctaca tcgtgcgttt
     3721 cgtttactgt tgttgaaact gctgtagatg gtttgttaga tggtgcgttg gatgttactt
     3781 tgttgtttgt atcatcagct gttccctgtg ctgatgctga tacgttggtt gccgcttctt
     3841 caccagattg atgagccgct tcctttgttg gcagtactag ttgcctatct gttgttgctt
     3901 tgtctatcgt tgttactgca tgtgctttca ttggtgtatg ttgctcagcc gcgctcgaga
     3961 cttgccataa tcccattgca ctaaaaagca aaacgagcca tacacttgtt ttaagtaata
     4021 aagctttcat ttcgttccct ccattaactg tcatacacca atatattatc ataatcctta
     4081 tattaaaatg attgatttta tgtaaattat ttataaatta catttaatat cgaattattt
     4141 ttcacatttc aactagaacc ttaatttcaa caacagccat ttcccaccaa caacataaaa
     4201 aagcacccga taaagtcgtc tcacagcagt gccgaacttt atagggtact ctcatttata
     4261 ttgtatatat tggcgttgga atagctttat ccgtatcaca tagcaatact tctttttccg
     4321 tatcaatatc gtgttcgttc aatacttgac caacactcat acgcgccaaa tctttcatat
     4381 tattatcttg tgataaatgc gataagtaaa tacgtttcgt gttacctgta atcacgtctg
     4441 tcatcgcatg acccgcatcc tcattagata catgacccat atcgcctaaa atacgttgtt
     4501 tcgtcttcca tggataacga cacattctca acatatcgac gtcatgatta ctctcaaaaa
     4561 taaacgcatc gctgccacgt atcatacctt tcatacgatc agacacgtat cccgtatccg
     4621 ttaaaatcgt aaacttctta tagttattat ggaaaatata aaattgtgga tctatcgcat
     4681 catgtgacac gttaaacgat tcaacatcga aacctgcaat agattttgtt tcataaggat
     4741 taaaaatgaa tttctgatcc atagggatgc gactatcttt cttttcaatt gcctgccaag
     4801 tcttttcatt cgcataaatt ggcaattgat atttacgcgc caaaacacct aatcctttaa
     4861 tatgatcaat atgttcatgg gttactaaaa taccatttaa atcttgaata ttacggtcaa
     4921 tttgactaaa caattcttcc attttcttgc cagtcaaacc aacatcaact aatagactac
     4981 ctttttcatt ttctacaaaa gtggcgttac ctgtactacc acttgctaat acactcatgc
     5041 gtatcaagcg gctcatcctt tctatttaag cagtcaatct ctctatatga ctacaatata
     5101 catcagtaca aatatacgat tttccctaca gaaactatca gtatattagc tgttttgtat
     5161 acctttccta ttatgtaact ttagttcatc gaccggtttc ttatatttaa attttgataa
     5221 tcacgtgcaa tgaatttctt aattattata acaatgatta gacaaatact aaagttttta
     5281 aaatagcagt tacactaatt ttacaatgcg gtactactta aaatatgaat aaatgcgcac
     5341 gttggagaca cagaaatgtc gcctgtcagc cataataaac cgtaccagca aaaagctagc
     5401 actgcttctc acatatgatg agcttgcaat gctagcttat tacgattcat attaatgatt
     5461 aataatttta gggttattat ttgtcgcttc gacatagtaa gtattcgttt tgtccttacc
     5521 gtcatgcttc actttaattt cccagtttgg ttgtaacaat tgaacattcg tttcattcac
     5581 gactgaatag taaccaagtc tagcattaat gacttcatca ccttttttca agtaacgatt
     5641 ataatataat gcctcgattg cttttctcac actaatcact tgatgcttct tatctgcacc
     5701 atctgtgggc ttaatgtcat ccatcattga ttgtttataa ctagtcgctt tgttatcttc
     5761 tattttaaag ttcaacatcg ctttgctgtt atttaaaatc ggaaaatcat catacgtttg
     5821 ttcatatttt acagaatctg aactaatctc gcttaattga tattcagcac ctttaaatac
     5881 gcgcttgtta acgtaatctt ttaaatcttt taagttatta tcactaactt ttaccgattg
     5941 gctgatgttc gcatttaata attttccact atctgatgtg gataaatcag aatcaccttt
     6001 agcttttgaa ctaaagtctt ttgatcgtcc cgtaatttgt tctaattgta tgcctttaac
     6061 agatttattt aaaatactgg ctggcaccct aatttcttct tgctgaaaat taacttcatt
     6121 gttactctcg acttcattaa tgtgtgagcg attgacttta ttaacataaa tcgatactaa
     6181 cacgatgttg acaagaataa acacgaaaat gaaaagtgtc tttgtcagtt tccagttcat
     6241 ttattcaagc ctcccatcgt tataaacata ccattcgcca tcatattcta cataccaacg
     6301 cggtacgagt tcactgttaa tctgcacttc aatgtgatta tgatctgagt tatcctgcat
     6361 ttcgtaaccg atagcgatgt ttgttacttt ttcaaaatta atatcactat tgttcgctaa
     6421 gcttgaacgt acagactcta atttcggcaa cgttttatta tcttcactgt ttaaaacaac
     6481 gtcggtgcgt aataacgaac gacgataatc aaagacgcct ttttcacccc aagtgacttg
     6541 aatttgatta gagccttctt tattaaacgt tggataaccg ttaaggaaac gttgatatgt
     6601 taactcgcct gactgattat tcgtactaaa caatctgaag tcttcgttta agaaaccacc
     6661 atgaccatta ataaaatcaa aggttcctgg aatcgtttct tccattttgc tggaacttgc
     6721 ttcatcttcg gacaagtttt tataatgata tttttcattt ttatcgttat agtttgcgac
     6781 acctgtatta ttgttgtagg ttgtaacacc actctttgaa ctacgaacga tggttgaatc
     6841 gtcaaatagt atagcattca ttttctcaac actaatcgtg ttaaatacca tgcgatatgt
     6901 ttttaacttt tcaggtttac ttggtgcaaa aacatgcgtc gtacgatcaa ttgtatcttt
     6961 gtttgtgatg atatctgtgt atggttgcat gtcttttttc actgctgcta atgcatctaa
     7021 aaaatgatca tttttcgttg tagttgttaa ttttacgtaa tcgtggcgat ctttgcttat
     7081 agcataaagc acgatattat catcagcatc atgatctatg accaaacgat tgaaattgaa
     7141 atgatttggt actttcgcat tcatgttcag tacttggcca agatatgttg ataacggtaa
     7201 atcatacgta aaatcgaata atgtaaaatc actgctcaaa tcaggaatca tcaagttatg
     7261 atcacgacga acatgttcca cggacttcac ttctttattt tttaaaggtt tcgtcagctt
     7321 attcacatta gaaaccgtcg caatcgtacc ttctggatga tcatttttcg aatgaataat
     7381 ctgaaatggc gtaatagttg tatccatttt ggctgtcata ggtgtcgtta aaggtttcgt
     7441 ttcactcttc ttactatctg tattgtcgac atttgcaata tcaggagaaa agttccatac
     7501 catatatgtc aatacgacac tcatcaagac aagtagcgct aaaatgacag atttaatatg
     7561 ctccttatta ttcatcccaa tcaccgtctt caatgacttc acatggaagt gtgataaaga
     7621 tagatgtacc ttgaccttct acactgtttg cccaaatacg accattgtgc gcttccacaa
     7681 tctctttcga aatggctagt cctaatccag taccacccat tttacgcgta cgtgccttat
     7741 ctacacgata gaatcggtcg aatatcttat cgactttatt gataggaata ccgatgccat
     7801 tatctttaat acgaatcgtc attcgattat aaagtggatt ttgtttcacg tggaactcga
     7861 cacgtttatc gcctctagaa tatttcatcg catttgtaat gacattatca aatacttgcg
     7921 tcattttatc aggatcaaat tctgtgaaaa tcgtcttttt cggaatatct cgaataaatg
     7981 ttgtatcttt cgcagacatt tcatgtcgat taataatttt attaatgaac atgttaaagt
     8041 cgataatttc tttgttgatt tgatcagact cattatccat tttagataac tgtagcaagt
     8101 cattgaccag tcgaatcatt cgttctgttt cttcacgggt aacagataaa aattgtggcg
     8161 caagttcctc atctttccat gcaccttctt caagtgcttc aatgtaacta ttcatagaag
     8221 ttaaaggtgt acgtaactca tgtgatacat tagcaacaaa ttcacgacgc tcacgttcaa
     8281 cttgttgttg ttcagtaacg tcatgtaaca cagcgatata accagttaca aatcctgttt
     8341 cctgcacaat cgtactaaag ttaacacgtg cgattagacc ttcttcttca tttaaatcta
     8401 ataagaaact atcattattc tcttgaattt cttccagttt aaattcatct tcaagactta
     8461 atacacttaa catgtaatat ccgatgatgt cttcttttgc cataccaagc atcttaagtg
     8521 ccatatcatt gacgatacga atacgtccac gacggtctgt tgcaataata ccatcactca
     8581 tatgggtgat aactgagtcc agtctacgtt tctcactttc agtattagcc tgcgcttctt
     8641 gtacacgttt agacaagtta ttaaatgcta aagctaattc gccaatttca tcattaccat
     8701 aaatcttcac acgttgcgta tagttacctc tggacatttc gaccgtctgg ttacgcatat
     8761 cggtgattgg tttggtaatc gttcgagcta taaagaatcc taggatgact gtgattaata
     8821 atgaaatagc tgtaccaaca atgaatattt gatttatatt atttaattgg ttataaacgt
     8881 cattaatttt tgattcgata taaatattac caattacctt tttatcgact ttaacgggga
     8941 tattatatac ccagacacgg tccttaccac cgccataatc ttttaaaatt aaatgatcgt
     9001 ttgattgtcc tagtgatagt gctttttgga cagaactatc attcgctttt tgattgatta
     9061 gactacggtt agactgcttc gtcgtcgcaa taataatttg gtctttatct ataaaacgaa
     9121 tttctccaat ttcttgacgg ttggcatact cacttaataa attttgaata tctttttgtg
     9181 catttacgga gcccttttcg tcatatactt tttcaatact aatttctaat tgtttagcgt
     9241 actgcgtaat attcttctta aaattatcaa gcagctcttt ttcaagatta tttgtaaaat
     9301 acagcccgat aatttgcata ccaatgataa tcagtaatac ataaacaatt acaagtttag
     9361 tatgaaggga ttgtagttgt tttagccact tcattcgttt cgacctctac tcatgttgtt
     9421 ggaggaaata tccaacgcct ctacgcgtca caatgtattc aggatgtgac ggatcatctt
     9481 caatcttttc acgtaaacga cgaatcgtta catcgaccgt acgtacatcg ccaaagtaat
     9541 catagcccca tactgtttgt aataaatgtt cacgtgtcat tacttgtccc atatgttttg
     9601 ataaataatg gaacaattca aattcacgat gtgttaattc aatatcttcg ccacgttttt
     9661 taatagaata tgcgtctgga taaatcacaa tatctttaat tgtgatttca ttcgtcacgt
     9721 tcccagtgtc ttgcgctggt tgtgagtaat gacggcgtaa attcgctttc acacgtgcaa
     9781 ttaattcacg tgtactaaac ggttttgtta catagtcatc tgcacctagt tctaaaccaa
     9841 gcactttatc aatttctgag tctttagcag ttagcataat aattggcatt tcgtattttt
     9901 tgcgcacttc gcgacatact tccataccat cacgaccagg taacatgata tctaataata
     9961 cgatgtctgg ttcttcttca taaattaagt cgactgcatc attaccatcg tatgcacagt
    10021 aaacatcgta tccttctttt tttaagttaa attctaaaat atcagcaatc ggtttttcat
    10081 catcaactac aacaactttt ctagccattt gcataaacct cttttcttaa atcattaata
    10141 ttattttatc attttttgtt ctttatcgtt tatgtttgtg taaaaaatca caggatgtcg
    10201 cttactattt ttgttattgt gcgcattttc
//
LOCUS       DAKPJH010000090        10229 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.090, whole genome shotgun sequence.
ACCESSION   DAKPJH010000090 DAKPJH010000000
VERSION     DAKPJH010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10229
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.090"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(223..924)
                     /gene="lrgB"
                     /locus_tag="OY092_002002"
     CDS             complement(223..924)
                     /gene="lrgB"
                     /locus_tag="OY092_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like protein LrgB"
                     /protein_id="HCX1076930.1"
                     /translation="MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSM
                     VFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIG
                     IGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILN
                     GVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVG
                     VVVVAVVPVFVAIFF"
     gene            complement(917..1360)
                     /gene="lrgA"
                     /locus_tag="OY092_002003"
     CDS             complement(917..1360)
                     /gene="lrgA"
                     /locus_tag="OY092_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like murein hydrolase modulator LrgA"
                     /protein_id="HCX1076931.1"
                     /translation="MVVKQQKDASKPAHFFHQVIVIALVLFVSKIIESFMPIPMPASV
                     IGLVLLFVLLCTGAVKLGEVEKVGTTLTNNIGLLFVPAGISVVNSLGVISQAPFLIIG
                     LIIVSTILLLICTGYVTQIIMKVTSRSKGDKVTKKIKIEEAQAHD"
     gene            complement(1473..2213)
                     /locus_tag="OY092_002004"
     CDS             complement(1473..2213)
                     /locus_tag="OY092_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor LytR"
                     /protein_id="HCX1076932.1"
                     /translation="MKALIIDDEPLARNELTYLLNEIGGFEEINEAENVKETLEALLI
                     NQYDIIFLDVNLMDENGIELGAKIQKMKEPPAIIFATAHDQYAVQAFELNATDYILKP
                     FGQKRIEQAVNKVRATKAKDDNSASAIANDMSANFDQSLPVEIDDKIHMLKQQNIIGI
                     GTHNGITTIHTTNHKYETTEPLNRYEKRLNPAYFIRIHRSYIINTKHIKEVQQWFNYT
                     YMVILTNGVKMQVGRSFMKDFKASIGLL"
     gene            complement(2216..3970)
                     /locus_tag="OY092_002005"
     CDS             complement(2216..3970)
                     /locus_tag="OY092_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCX1076933.1"
                     /translation="MLSLTMLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQL
                     CIIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVG
                     LFVGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIV
                     MEMIQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAV
                     QTHDVLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSD
                     HHIPTNEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTL
                     KMYFTNPNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFF
                     FNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQ
                     ARYPGRFNININVEDKYRDVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETAT
                     HVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFEST
                     SSGTTFWCVLPYERQEEE"
     gene            complement(4216..4890)
                     /gene="scdA"
                     /locus_tag="OY092_002006"
     CDS             complement(4216..4890)
                     /gene="scdA"
                     /locus_tag="OY092_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein ScdA"
                     /protein_id="HCX1076934.1"
                     /translation="MINKNDIVADVVTDYPKAADIFRSVGIDFCCGGQVSIEAAVLEK
                     KNVDLNELLQRLNEVEQTNTPGSLNPKFLNVSSLIQYIQAAYHEPLREEFKNLTPYVT
                     KLSKVHGPNHPYLVELKATYDTFKNGMLEHMQKEDDVDFPKLIKYEQGEVVDDINTVI
                     DDLVSDHIATGQLLVKMSDLTSSYEPPIEACGTWRLVYQRLKALEVLTHEHVHLENHV
                     LFKKVS"
     gene            complement(5034..6755)
                     /gene="tarS"
                     /locus_tag="OY092_002007"
     CDS             complement(5034..6755)
                     /gene="tarS"
                     /locus_tag="OY092_002007"
                     /EC_number="2.4.1.355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000975351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(ribitol-phosphate)
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HCX1076935.1"
                     /translation="MMKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCST
                     DQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETL
                     KDAAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRT
                     ALLKDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVS
                     PEDFYEVMRLIAVEILNADLEEAHKDQILAEFLNRHFSFSRTNGFSLKVKLEDQPQWI
                     NALGDFIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGK
                     LNIQFNEGEPYFEGIDIAKPKVKMTAFKFDNHKIVTELTLNEFMIGEGHYDVRLKLHS
                     RNKKHTMYVPLTVNANKQYRFNIMLEDIKADLPKEKIWDVFLEVQIGTEVFEVRVGNQ
                     RNKYAYTAETSALIHLNNDFYRLTPYFTKDFNNISLYFTAITLTDSISMKLKGKNKII
                     LTGLDRGYVFEEGMASVVLKDDMVMGMLSQTSENEVEILLSKDIKKRDFKNIVKLNTA
                     HMTYSLK"
     gene            complement(6788..8476)
                     /locus_tag="OY092_002008"
     CDS             complement(6788..8476)
                     /locus_tag="OY092_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HCX1076936.1"
                     /translation="MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRT
                     MKANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVNEQELDYIAQLNPDVINDVYQN
                     LKPEQEEEYNELETQNGKINFLLQTYLKEFRKGGISKKTVYTVTPEISSDVNEFVLDV
                     VVTTPEVKSIYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTTKFFHLKKGNTVLFTSD
                     SRPTMSGNFEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRLPYLLGKADYIF
                     VDDFHPLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYV
                     SSETDIPFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKVIL
                     FAPTFRGSGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYF
                     VDVSDFREVNDILFITDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYE
                     SFVPGKIVQSFDALMDALDNEDYEGEKVIPFLDKHFKYQDGRSSERLVRNLFGS"
     gene            complement(8498..9523)
                     /locus_tag="OY092_002009"
     CDS             complement(8498..9523)
                     /locus_tag="OY092_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCX1076937.1"
                     /translation="MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRY
                     YTGSRDENVLSQKLPMSLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENY
                     LKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKS
                     ISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIP
                     EGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEFEIATINDLTEAFEADLSTSWGK
                     TVLKWIM"
     gene            complement(9516..>10229)
                     /locus_tag="OY092_002010"
     CDS             complement(9516..>10229)
                     /locus_tag="OY092_002010"
                     /EC_number="2.7.7.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribitol-5-phosphate cytidylyltransferase"
                     /protein_id="HCX1076938.1"
                     /translation="KYAGILAGGIGSRMGNVPLPKQFLDLDNKPILIHTLEKFILIND
                     FEKIIIATPQQWMTHTKDTLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGIND
                     DDVIVTHDAVRPFLTHRIIKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVRN
                     EMYQGQTPQSFNINLLKESYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKVT
                     TPYDLKVANAIIRGGIADD"
BASE COUNT         3247 a         1907 c         1467 g         3608 t
ORIGIN      
        1 caaatgatat aacttacatt ttaattcttg tttaaattaa ttcgttctac catttttcaa
       61 aagtggcaat acataaaacg aacgcctaaa taccataatt cctagtaaaa agtaatacat
      121 acataaaaac gtctatatcc cagttataaa ccggagtata gacgtttttt tacgataata
      181 acaatggctc aaattgctat tatcttgctt aggtttttcg ttttagaaga atattgctac
      241 aaagacaggc acaactgcta caacaactac accaactaac actaaagcta tacttgccat
      301 tgattcttct acaggtccta attctttggc tggtgctaca cctaatgtgt gaccacttgt
      361 tccaagtgct aatcctcggg caatagggtt agtaattcgg aaaagcttca agaatttatt
      421 acctagggca taaataatga caccatttaa aataactgct aatgatgtta attcttttat
      481 accaccgata ccagctgata ctggtaacgc aatcgctgta gttgctgctt gaggtaacat
      541 tgataaaata acatcattgg caaattgtgc taacttcgca aaagttaaaa taattaataa
      601 cgctacaact gtaccgatac caatacctcc gatgatacga tgccaatgtt taacaagcac
      661 ttcacgcttt ttatataacg gaatcgcaaa acagattgtt gccggttcta agaagaagta
      721 aataatatct ccacctattt tgtaagtctt atacggaatg cctgttaaat agaggaaggc
      781 cacaccaaat accatactga caaatagcgg tgcgaataag aagaaacgat tagttttttc
      841 aaataatatg gtcgctaaga aaaatggtat aacggataac agtattccga agtaaggtgt
      901 gtttagtgct aagtggttaa tcatgagctt gtgcctcctc tattttgatc ttttttgtga
      961 ctttgtcacc tttagatctc gaagtaactt tcataataat ttgtgtgaca tagccagtac
     1021 aaataagtaa tagtattgtt gagacgatta ttagtccaat gattaaaaat ggtgcttggc
     1081 taatgacacc taaagagtta acaactgaga taccggctgg tacgaagagt aagccaatgt
     1141 tatttgttag tgtcgttcct actttttcga cttcgcctaa cttaacagca ccagtacata
     1201 ataatacaaa taataatact aaaccgatta ctgatgcagg cataggaatt ggcataaatg
     1261 attcaattat tttcgataca aagagtacta aagcaattac aatgacttgg tgaaaaaagt
     1321 gtgctggttt tgatgcgtct ttttgttgtt tcacgaccat tgcctcctac gtttgattta
     1381 actaaagtat agatggctca cttcgatttg cgtgattttt agtccgaaat acaaaatatc
     1441 ataggtaaaa tgcataaaaa aaaggattac tgttaaagta atcctatcga cgctttaaaa
     1501 tctttcataa atgaacgtcc aacttgcatc ttgacaccat ttgtcaatat taccatataa
     1561 gtgtagttaa accattgttg cacttcttta atgtgtttcg tgttaataat atatgaacga
     1621 tgaatacgta tgaaataagc gggattcaat cgtttttcat aacgattcaa tggctctgtt
     1681 gtttcgtatt tatgatttgt tgtatgtatg gttgtaatac cattatgtgt gccaatccca
     1741 ataatatttt gttgctttaa catgtgaatt ttatcgtcaa tttcaacagg taaactttga
     1801 tcaaaattcg ccgacatatc attcgcaatt gcacttgcgc tattatcatc tttggcttta
     1861 gtcgcacgaa ctttattgac tgcttgttca atacgttttt gaccaaacgg tttcaaaata
     1921 taatctgtcg catttaattc aaatgcctgt actgcgtatt ggtcatgtgc agttgcaaaa
     1981 ataatcgcag gtggctcttt catcttttga attttagctc ctaattcgat accattttca
     2041 tccattaaat tgacatctaa aaatataatg tcatattgat ttatcagtag tgcttccaat
     2101 gtttctttta cattttctgc ctcattaatt tcttcaaaac caccaatttc atttaataaa
     2161 tatgttaatt cattacgtgc taatggctca tcatctatga ttaatgcttt catatttatt
     2221 cctcctcttg tctttcataa ggaagtacac accaaaaagt ggtaccgctc gatgtcgatt
     2281 caaattgtaa tgctgcggat tttccaaata atccttttag gcgtaagttt aaattttcta
     2341 aagcactacc agttccagac tctgattcta cagatgtttc tcccaacaaa tgcattttat
     2401 ctttagaaat accctgacca ttatcttgta caataatacg tacatgtgtt gcagtttctt
     2461 taatcactga cacgtcaata tcgttacctt gctttcgatt cgtaaacgca tgtttgatgg
     2521 cattttcaac taaaatttga attaaaaatg gtggtacaag cacatcgcga tacttgtctt
     2581 caacattaat attgatatta aatcttcctg gataacgtgc ttgttcgagt gataagtatg
     2641 cacgcacttg acttaactct ttatctaaag taatcgtatg ttgctttgag ccttgtaaat
     2701 tcgctctgaa aaaataactc aattctaata gtaactctcg tgccttttcg ctatttattc
     2761 taactaaagc tgaaatcgtg ttaattgaat tgaagaaaaa atgcggactc acttgtgcct
     2821 gcaatgactt aatttcagca tctttcaata acttactttg cgtttcggct tcaccaagtt
     2881 caatttggct actaaaaata tttgccaatc cttctgcaag ttgacgttcc acaaaagtta
     2941 aatcattagg gtttgtaaaa tacatcttca atgtaccgac gatagaacca tgcatctcaa
     3001 gtggtatcac gatagctgct ctaagcgggc aattcggatg actacaacca atctcttctt
     3061 tagtatgaac ttctttcaac tttcctgatt tcaatacatc tttagacaga cttgttaata
     3121 tttcatttgt tggtatgtga tgatcactac ctgcacctac atgcgataag atttcatttt
     3181 tgcttgtaat tgctacggca gatactttca ttaaattttt aataatcatc gcaatttgct
     3241 gtgccgattc tctattcaat ccttctttaa aatacggcaa tgtctggttc atcaattgca
     3301 gtacatcatg tgtttgaaca gccttcattt gctcctcttg ctttaatgtt gaaatgataa
     3361 tagacataaa aatcgccgta ccaacgctat taacaataat cattggtagt gcaattaatg
     3421 atatgaggtc aaccgcatat gctttgtcgt gggaaaatgt taaaatgctc aacatttgaa
     3481 tcatttccat aacaattcca atcatggcac ttttcgcaat actcgggtaa cgcttgcgtc
     3541 tttgagcttg taaaccaaaa taaccagcaa ttataccgat aaatatagat gagataagat
     3601 aaacttgtgc atccgcccca cccatataca ctctgaaaat acctgaaata acgccaacaa
     3661 atagacctac aaaagggcca ccaactaatc ctgcgacacc tattgtcaat acacgtgtgt
     3721 tagctaaaga tacatcatca tctaaacgga agtacacact tcctgacaaa ctatgttgat
     3781 gatcgatgac gataccagtt aaattagaca ttaaggcaaa caaactgaaa ataatacata
     3841 attgccaacg tgctttccat gtacgtcgac gattcattaa gtttttaaaa tatggaatat
     3901 tcatcaacac ataggccaaa ataataatta aacctacacg ctcaagtaat aacattgtta
     3961 gcgatagcac gatagcacct cagtgaatta taattatgtt tattttatca taatagtgca
     4021 tgtaaaattc atgaataaat tattaaaaaa acacgatact atttaattac ctataccatt
     4081 aaaatttcat atcaattctt atgctaagtt gacaattttc cttttcaaaa taatgactat
     4141 catgtcacta aatttctgtt aagtatagcg aaaaactgct gacattactt tgccaacagt
     4201 ttctaatcgc gttatttatg atactttttt aaataaaaca tgattctcta aatgaacatg
     4261 ctcatgtgtt aacacttcaa gtgcttttaa tctctgataa acgagtcgcc aagtaccaca
     4321 tgcctctatc ggtggttcat agcttgatgt taaatcgctc attttcacta acaattgtcc
     4381 cgttgcaatg tgatcagata ctaaatcatc aatcactgta ttaatatcgt ctactacttc
     4441 accttgttca tatttaatga gttttggaaa atcaacatca tcttcttttt gcatatgctc
     4501 taacatgcca tttttaaatg tatcgtatgt tgcttttaac tcaactaaat atggatgatt
     4561 aggtccatgt actttcgata actttgtcac ataaggtgtt aaatttttaa attcttctct
     4621 tagaggttca tgatatgctg cttgaatata ttgaataagt gatgaaacat ttaaaaattt
     4681 aggatttaac gaacctggtg tattcgtttg ttcaacttca ttgagacgtt gtaataattc
     4741 gttcaaatct acatttttct tttctaagac tgctgcttct atacttactt gtccgccaca
     4801 acaaaaatct attcccacac ttctaaaaat atctgctgct ttcggataat cagttactac
     4861 atctgctact atgtcatttt tatttatcat tatagataac ctcctcattt tcagtgtata
     4921 caatttaatg tatttgaaaa tgataaacga ggaaatgtca taatcatgtc ataaacagca
     4981 aaacaaaacc ctcaaatcat gttagttcac atagatttga gggcatttat tatttatttt
     5041 agcgagtaag tcatatgtgc agtgtttaac ttaacaatat ttttgaagtc tcgcttctta
     5101 atatctttac taagtaagat ttccacttcg ttttctgacg tttggcttaa cattcccatc
     5161 accatgtcgt cttttagcac gacactagcc ataccttctt caaatacata accacgatcc
     5221 agaccggtta aaatgatttt gtttttacct tttaacttca ttgagattga atccgttaat
     5281 gtaatagctg taaagtataa cgaaatgtta ttaaagtctt ttgtgaaata cggtgttaat
     5341 ctataaaaat cattattcaa atgaattaat gcacttgttt ctgcagtata tgcatattta
     5401 ttacgttgat taccaacacg cacttcaaat acttccgtac ctatttggac ttctaagaaa
     5461 acatcccaaa ttttttcttt aggtaaatcc gctttaatat cttctaacat aatgttaaaa
     5521 cgatattgtt tattcgcatt gacagttaaa ggtacataca ttgtgtgctt cttgtttcgt
     5581 gaatgtaatt taagtctgac atcataatgt ccttcgccaa tcataaattc atttaacgtt
     5641 agctctgtaa caattttatg attatcaaat ttaaatgctg tcattttcac ttttggctta
     5701 gcgatatcaa tgccttcaaa gtatggttcg ccttcattga attgaatgtt taatttacca
     5761 tctacaatat caaaacggta gtattgacct tgacggtaac tttcttctac agttctatag
     5821 ttgtctatat ctttcgctct cgcgtagtgc aacaatggtc gtaatttact catcaccaat
     5881 gcatctacac gttctggaac tgcttgtata aagtctccta gagcattaat ccattgcggt
     5941 tgatcttcta gtttaacttt aagtgagaag ccattcgtac gagaaaaact aaaatgacga
     6001 tttaaaaatt ctgctaagat ttgatcttta tgagcttctt ctaaatctgc atttaatatt
     6061 tctacagcaa tcaatctcat gacttcgtaa aagtcttcag gtgaaacata cgcactactc
     6121 atatgttccc cttcacgctt tgtagcataa taatacgctt tatcacttaa cacactgatt
     6181 cgatttgcat tcaaatatgc tttcattgta aataattgat cttctgcact ctttaattct
     6241 tctggaaaat aaatgtcatt atcttttagt aatgctgttc tatagatttt agtcgggctt
     6301 aaagtataga taattcttga atttaacaat gtaacttcag gtgctgtttc tttaaacata
     6361 gattgtggta caccacgacc attaacacct ttcattttaa tcaataagac atctgagtga
     6421 tgttcatcaa taaatgctgc tgcatccttt aaagtctctt tgtttatata gtcatcggag
     6481 tccacaaata atacaaattc accttctgct tgttttaacg ccacatttct aggtttacct
     6541 ggaccaccag aatttgtttc gagttgactt actttcaagt tcaatttatt gcgatacttt
     6601 tcaactattt gtaacgtttg atctgttgaa cagtcatcaa ctacaaccac ttcaaattca
     6661 gttttcggaa aatcttgttt cgcaaggcta ttaagtaatt ctgttatata cttttctgaa
     6721 ttgtatgttg gaactattac tgaaaatttc atcattatac ctctcccact ttgaatacta
     6781 tataaactta gctaccaaat aaatttctga ctaaacgctc acttgatcgg ccatcttgat
     6841 atttaaaatg tttatctaag aatggaatga ctttttctcc ttcataatct tcattgtcca
     6901 aggcgtccat taatgcgtca aatgattgca caattttacc tggaacaaat gattcatatg
     6961 gttcataaaa atcacgcgtc gtaatataat cttctaaatc aaatgcatag aaaatcattg
     7021 gctttttaaa tactgcatat tcatatatta aagatgaata gtcactaatt aataaatctg
     7081 ttatgaacag tatatcatta acttctctaa agtcagaaac gtcaacaaaa tattgtttat
     7141 gtttgtctgc aatattaagt ctatttttca caaatggatg cattttaaat aatacaaccg
     7201 cgttattttt ttcgcaatat cttgctaaac gttcgaaatc aattttgaaa aatgggtaat
     7261 gtgctgtacc atgaccacta cctctaaatg ttggtgcgaa aagaatgact ttcttacctt
     7321 taataattgg taattcatct tccatctctt gtttgatctg tgtcgcataa gcttcatcaa
     7381 atagtacatc agtacgtgga acacctgtag gcactacatt tttctcttta ataccaaatg
     7441 cttcagcgta gaatggaata tcggtttcag atgatacata agcttttgta tagctacgat
     7501 gatttaatga atcaataaat ggtccaccct ttttaccagt acgactaaag ccaactgttt
     7561 taaaggcacc aacggcatgc catacttgaa taacttcttg agaacgtcta aaacgcactg
     7621 tataaatcaa tgggtgaaag tcatcaacaa agatgtagtc tgccttccca agtaaatatg
     7681 gcaatctaaa cttgtcgatg atgccacgtc tatctgtaat attcgcttta aaaacagtgt
     7741 gaatatcata ctttttatct aaattttgac gtaacatttc gttatagatg tattcaaagt
     7801 ttccagacat cgttggtcta gagtctgatg tgaacaacac cgtattccct tttttcaagt
     7861 ggaaaaattt cgtcgtatta aatatcgctt taaaaataaa ttgtcttgta ttaaatgatt
     7921 gtttgcggaa atacttacgt aattctttat atttacgaac gatataaata cttttaactt
     7981 ccggagtcgt tacaacaaca tcaaggacaa attcattaac atcgctagaa atttcaggtg
     8041 taacagtata aaccgttttc ttcgaaatgc cgccttttct aaattctttt aggtaagtct
     8101 gcaataagaa attgatttta ccattttgtg tttctaattc gttgtattct tcttcttgtt
     8161 ctggctttag attttgatat acatcattaa tcacatctgg gtttaactgt gcaatataat
     8221 caagttcttg ctcattcact aataagtact tatcttcagg taagtaataa ccattatcta
     8281 agatagctac attgaaacga caaacgaatt gattcccatc tattttgaca tcattcgcct
     8341 tcattgtacg tgtctcagtt aaatttctta atacaaaatt actatcttct aaatctaggt
     8401 tttcactatg tccttcaacg aataactgaa cacgttccca atagatttta tctatatata
     8461 tcttactttt aaccaacgtt aattcatcct tttctattta cataatccat tttaatactg
     8521 ttttacccca agatgtagac aggtctgctt caaaagcttc tgtaagatca ttaattgttg
     8581 caatttcaaa ttcttggcct tttaacaacg ctaatttatc tacaatatct gggtattgaa
     8641 tgtataagtc tacaacatct tggaaatctt ttgaaccact tcgactacta ccaatcaacg
     8701 ttagtccttt ttccaatact agacgtgtat taacttctac tgggaactca cttacaccta
     8761 acagtgcaat gcttccttct ggtgaaatgt aatcgatcat ttgatttatg gctgattgac
     8821 taccgcgacc acccacacac tcaaatgcat gatcaaatgt taagccttca ggtattttat
     8881 taataaagaa gacatcatca acaaatgaga agtgactcaa tttataatct gttttaccaa
     8941 agacatatat tttagactct ggatataatt tacgtaataa aatggctgta atgtaaccta
     9001 agttaccatc accccaaata ccaaatgtat ttttatttga aatagatttc ttttcaaaac
     9061 gacgaatagc atgcaaactt actgttacaa gctctgtata tgaaataata cttaaatcaa
     9121 tatcatcagg tagtggtaca gctctatcat gatttagcaa cacaaaatct tgcataaacc
     9181 catcatgtcc acttgatctg aagtagctcg attttaaata gttttcagca atgacatcgt
     9241 ctttttctgt cggcgtattc ggtaccataa ctacttttgt acctttatta aacacacctt
     9301 tactgtcaaa tacgacctca ccaacacctt catgaattaa agacattggc aatttctgag
     9361 ataagacatt ctcatcacgg ctaccagtat aatatctttg atcggcagca caaattgaca
     9421 tatataaagg acgtacaatg acatagtcac tgtaaatatc tacgttgtta tacgtaactt
     9481 caaattgtct aggtgcaact aattgatata cttgattaat catcggcaat accacctcga
     9541 ataatagcat tcgctacttt taaatcgtaa ggtgttgtta ctttaatgtt atataactca
     9601 ccttttacaa gtcgaaccgg tttgtttgtt tctacaataa tcttacaagc atcagataaa
     9661 atactctttt gctcatcact caactgtgca tagctttctt ttaataaatt tatattaaac
     9721 gattgaggtg tttgaccttg gtacatttca ttacgcactg gaattgcatc aatcgtttga
     9781 ttatctttag atgtaacaat cgtatctata gcatcaatca ctgtgtctac tgcaccgtac
     9841 tctaaagcag cttgaatatt ttctttaata atacgatgcg ttaaaaatgg tctaactgca
     9901 tcatgtgtca caataacatc gtcatcgtta ataccatttg ttgattcaat atgtttaacg
     9961 atattcataa ttgtatcgtt acgatcgcta ccaccttgaa tgacttcaat tctttcatca
    10021 gaaattttga attttctaag tgtatctttc gtatgcgtca tccattgttg tggcgtcgcg
    10081 ataataattt tttcaaaatc attaattaaa ataaattttt ctaatgtatg gattaaaatc
    10141 ggtttgttgt ctaaatctaa aaattgttta ggtaaaggta cgttacccat tcttgagcct
    10201 atacctccag ctagaatacc agcgtattt
//
LOCUS       DAKPJH010000091        10176 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.091, whole genome shotgun sequence.
ACCESSION   DAKPJH010000091 DAKPJH010000000
VERSION     DAKPJH010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10176
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.091"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..760
                     /locus_tag="OY092_002011"
     CDS             <1..760
                     /locus_tag="OY092_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCX1076939.1"
                     /translation="IEQNDTHYVDSREVAEMVGKEHKNLIRDVENYRSVILQSSKLSP
                     DDYFIESTYLGANNRQTKHYLLTKKGCDIVANKMTGSKGILFTATYVDAFHKMDEHIK
                     QQAKLYVPQTPMQALEMMFKAQKDQEQFNQQMQQEITGIRHIVGIETKNWRNDTNKML
                     SAIAQHLGGGAMHQKVKSEAYKVLEEKGRCNLKIRMQNRKGKMLANGATKTQINKLSK
                     LDVITDEPRLIEIYISVIKSMAIKYGVDISQFEI"
     gene            774..989
                     /locus_tag="OY092_002012"
     CDS             774..989
                     /locus_tag="OY092_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000434502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HCX1076940.1"
                     /translation="MEQEQREFLAYIHYILNMEISNTSETYTHTIEEAGKIETIEVSR
                     EQHLEEVMKWAAQEIEKHFDLVPEPED"
     gene            1042..1182
                     /locus_tag="OY092_002013"
     CDS             1042..1182
                     /locus_tag="OY092_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076941.1"
                     /translation="MLQKFRIAKERNKLKLKLLKHASYCLERNNNPELLRAVAELLKK
                     VN"
     gene            complement(1197..1829)
                     /locus_tag="OY092_002014"
     CDS             complement(1197..1829)
                     /locus_tag="OY092_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076942.1"
                     /translation="MYIDPLKNVRLSINNAINNVEISRSMAIKQSLKLKYQLDIINKN
                     NLNLFSNFKVDFHLNNLIEMNFNLRNSFSSLTFQRNLFSEDAIKSFKELYRFDDEIVL
                     QAQQTIRDFYINPTAISTLAEAINSTYPINEQGTYKRNDKFVNRIKNDFPHPFKQLIR
                     WSNGIVAGADIQIFVTNYINENDLHIQNSLIVAIVCLLSFLSTYCSHSKK"
     gene            1884..2147
                     /locus_tag="OY092_002015"
     CDS             1884..2147
                     /locus_tag="OY092_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1076943.1"
                     /translation="MPKIIVPPTPENTYRGEEKFVKKLYATPTQIHQLFGVCRSTVYN
                     WLKYYRKDNLGVENLYIDYSPTGTLINISKLEEYLIRKHKKWY"
     gene            2159..2326
                     /locus_tag="OY092_002016"
     CDS             2159..2326
                     /locus_tag="OY092_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1270 domain-containing protein"
                     /protein_id="HCX1076944.1"
                     /translation="MSNIYKSYLLAVLCFTVLAIVLMPFLYFTTAWSISGFASIATFI
                     FYKEYFYGVDD"
     gene            2327..2647
                     /locus_tag="OY092_002017"
     CDS             2327..2647
                     /locus_tag="OY092_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000219664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076945.1"
                     /translation="MTWFEEYVKPSVEWERKAEQAVLSDDEVKTITEYRKKYNNPHIY
                     MSAQNRNYLVEYLDRHTGDIVLHNLKLKKSSRRRVHQYLMVGQIVVPGEPKGTIYEAS
                     LIIR"
     gene            2741..3001
                     /locus_tag="OY092_002018"
     CDS             2741..3001
                     /locus_tag="OY092_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HCX1076946.1"
                     /translation="MYYEIGDVCQKVINVDGFDFKLAVKKKDHSILVNILDLEDKFID
                     GINITDENDLYTALDILNQSIYEWIEENTDERDRLINLVMKW"
     gene            3011..3232
                     /locus_tag="OY092_002019"
     CDS             3011..3232
                     /locus_tag="OY092_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2483 family protein"
                     /protein_id="HCX1076947.1"
                     /translation="MKQTVTYIIRHRDMPIYITNKPTDNNSDVSYSTNRNRAREFNGM
                     EEASINMDYHKAIKKTVTETIEYEEVEHD"
     gene            3225..4004
                     /locus_tag="OY092_002020"
     CDS             3225..4004
                     /locus_tag="OY092_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCX1076948.1"
                     /translation="MTEQTNQDVDILTQLGVKDISKQNANKFYKFAIYGKFGTGKTTF
                     LTKDNNALVLDINEDGTTVTEDGAVVQIKNYKHFSAVIKMLPKIIEQLRENGKQIDVL
                     VIETIQKLRDITMDDIMDGKSKKPTFNDWGECATRIVSIYRYISKLQEHYQFHLAISG
                     HEGINKDKDDEGSTINPTITIEAQDQIKKAVISQSDVLARMTIEEHEQDGEKTYQYVL
                     NAEPSNLFETKIRHSSNIKINNKRFINPSINDVVQAIRNGN"
     gene            4034..4588
                     /locus_tag="OY092_002021"
     CDS             4034..4588
                     /locus_tag="OY092_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1076949.1"
                     /translation="MKITGRTQYIQGTNQEAFMKGGDFLGAGEFTVKVANVEFNDREN
                     RYFTIVFENNEGKQYKHNQFVPPFQQDHQEKQYIELLSRLGIKLNLPDLTFDTDQLIN
                     KIGTIVLKNKFNEEQGKYFVRLSYVKVWNKDDEVVNKPEPKTDEMKQKEQQANRKQTP
                     MSQQSNPFANANGPIEINDDDLPF"
     gene            4601..5272
                     /locus_tag="OY092_002022"
     CDS             4601..5272
                     /locus_tag="OY092_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076950.1"
                     /translation="MQYITRYQKDNDGTYSVVATGVELEQSHIDLLENGYPLKAEVEV
                     PDNKKLSIEQRKKIFAMCRDIELHWGEPVESIRKLLQTELEIMKGYEEISLRDCSMKV
                     AKELIELIIAFMFHHQIPMSVETSKLLSEDKALLYWATINRNCVICGKPHADLAHYEA
                     VGRGMNRNKMNHYDKHVLALCREHHNEQHAIGVKSFDDKYQLHDSWIKVDERLNKMLK
                     GEKKE"
     gene            5269..5418
                     /locus_tag="OY092_002023"
     CDS             5269..5418
                     /locus_tag="OY092_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076951.1"
                     /translation="MNRLRIIKIALLIVILAEEIRSAKKIKKFTPEDSKGFPDITKDS
                     IKEPK"
     gene            complement(5411..5692)
                     /locus_tag="OY092_002024"
     CDS             complement(5411..5692)
                     /locus_tag="OY092_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076952.1"
                     /translation="MEKPYMLTYDLNSPGQKYEELRNVIKKEISNGHCNYWKSSFLFR
                     SSLSTSEMIEKLKPYLDSGDKLFVTEIVNNKQGWLTKEQWDFINHNIFI"
     gene            5758..6528
                     /locus_tag="OY092_002025"
     CDS             5758..6528
                     /locus_tag="OY092_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protein"
                     /protein_id="HCX1076953.1"
                     /translation="MATFRVYKESGNFVTVHKDFIHDSNISWKAKGILLYLLSRPDNW
                     QIYETELEQHSTDGLSGLKSGIKELEEIGYIQRSRKRDKSGRLNGYEYLVYEQPHHIR
                     FSNVGKTVNGKTNNGKTVNGKSHTTNNNSTNNDLTNNNNTNNEGSILSGNPTVSSIPY
                     KEIIEYLNKKAGKHFKHNTSKTKDFIKARWNQDFRLEDFKKVIDIKTAEWLNTDSDKY
                     LRPETLFGSKFEGYLNQKIQPTGTDQLERMKYDESYWD"
     gene            6538..7317
                     /locus_tag="OY092_002026"
     CDS             6538..7317
                     /locus_tag="OY092_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCX1076954.1"
                     /translation="MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKK
                     HPNGYEYKDGCKCEIYEEYKRNKQRKINNIFNQSNVNPSLRDATVKNYKPQNEKQVHA
                     KQTAIEYVQGFSTKEPKSLILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDR
                     IKATYNKNAVETTDELVRLLSDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFT
                     TNFSDKELNQNMNWQRINSRMKHNARKVRVIGDDFRERDAW"
     gene            7311..7469
                     /locus_tag="OY092_002027"
     CDS             7311..7469
                     /locus_tag="OY092_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076955.1"
                     /translation="MVTKEFLKIKLECSDMYAQKLIDEAQGDENKLYDLFIQKLAERH
                     TRPAVVEY"
     gene            7482..7703
                     /locus_tag="OY092_002028"
     CDS             7482..7703
                     /locus_tag="OY092_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3269 family protein"
                     /protein_id="HCX1076956.1"
                     /translation="MPKEKYYLYREDGTEDIKVIKYKDNVNEVYSLTGAHFSDEKKIM
                     TDSDLKRFKGAHGLLYEQELGLQATIFDI"
     gene            7714..8118
                     /locus_tag="OY092_002029"
     CDS             7714..8118
                     /locus_tag="OY092_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1064 domain-containing protein"
                     /protein_id="HCX1076957.1"
                     /translation="MSKYNAKKVEYKGIVFDSKVECEYYQYLESNMNGTNYDRIEIQP
                     KFELQPKFGKQRPITYIADFSLWKEGKLVEVVDVKGKATEVANIKAKIFRYQYRDVNL
                     TWICKAPKYTGQEWMVYEDLVKVRRKRKREMK"
     gene            8123..8308
                     /locus_tag="OY092_002030"
     CDS             8123..8308
                     /locus_tag="OY092_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3113 family protein"
                     /protein_id="HCX1076958.1"
                     /translation="MQQQAYINATIDIRIPTEVEYQHFDDVDDEKDALADYLYNNPGE
                     ILEYDNLKIRNVNVEVE"
     gene            8309..8926
                     /locus_tag="OY092_002031"
     CDS             8309..8926
                     /locus_tag="OY092_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076959.1"
                     /translation="MAGIKTKVRIDGKLMTLIDVSDKYDIKVSTLITRYDRGARGKDL
                     IQNVVKPKKVKVDGKMMTVSEIVKKYNLSKGLINYRVAKGLTGDALIAPPQEKPPSKY
                     TEYENEQMKKKGLTPEIVRNRVAKGWEMSEAIDAPFGMKLNDYREIQITKTLEREREM
                     ARQRRKEAELRRKKPHLFNVPQKHSRDPYWFDVTYNQMFKKWSEA"
     gene            8926..9180
                     /locus_tag="OY092_002032"
     CDS             8926..9180
                     /locus_tag="OY092_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HCX1076960.1"
                     /translation="MSIISNRKVDMNEMQDNVKQPAHYTYGDIEIIDFIEQVTAQYPP
                     QLAFAIGNAIKYLSRAPLKNGHEDMAKAKFYVDRAFDLWE"
     gene            9180..9428
                     /locus_tag="OY092_002033"
     CDS             9180..9428
                     /locus_tag="OY092_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076961.1"
                     /translation="MDMTDSARKEYLNQFFGSKRYLYQNNERVAHIHVLNDTYYFHGH
                     IVPGWQGVKKTFDTAEELEKYIKQHGLEYEEQKQLTLF"
     gene            9442..9648
                     /locus_tag="OY092_002034"
     CDS             9442..9648
                     /locus_tag="OY092_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076962.1"
                     /translation="MKIKIEKEVNLPELIQWAWDNPKLSGNKRFYSNDVERNCFVTFH
                     VDSILCNVTGYVSINDKFTVQEEI"
     gene            9651..10055
                     /locus_tag="OY092_002035"
     CDS             9651..10055
                     /locus_tag="OY092_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076963.1"
                     /translation="MKIKVKKEMRLDELIKWARENPDLSQGKIFFSTGFSDGFVRFHP
                     NTNKCSTSSFIPIDIPFIVDIEKEVTEETKFDRLLEVYEIQEGVYKSALHKGISLNER
                     FEDDNIFPTKAFYILNDDMTMTLIWKDGELVE"
BASE COUNT         4040 a         1525 c         1969 g         2642 t
ORIGIN      
        1 aatagaacag aacgacacac attacgtaga tagtagagaa gttgcggaaa tggtaggcaa
       61 ggaacataaa aatttaatta gagatgttga aaattataga agtgtaattt tgcaaagctc
      121 aaagttgagc cctgacgatt acttcataga atcaacttat ttaggcgcaa ataatcgtca
      181 gactaaacac tacctactaa ccaaaaaagg atgcgacata gtagcaaaca agatgacagg
      241 cagtaaaggg attttgttca cagcaactta tgttgacgca ttccataaaa tggatgaaca
      301 cattaaacaa caagcaaaac tttatgtacc acaaacacca atgcaagcat tagagatgat
      361 gttcaaagcg caaaaagacc aagaacagtt taaccaacaa atgcaacaag aaatcacagg
      421 tattcgtcac attgtcggta tcgaaacaaa aaactggcgc aatgatacaa acaaaatgtt
      481 atctgcgatt gcgcaacatt taggtggcgg agcaatgcac caaaaagtta agtctgaagc
      541 ttacaaagta ttagaagaaa aaggacgttg taatttaaaa atccgtatgc agaatcgcaa
      601 aggcaaaatg ctagcgaatg gtgcgacgaa gacacagatt aacaagttgt caaaattaga
      661 tgtgattacg gatgaaccta gattgattga gatttacatt tcagtgatta agagtatggc
      721 aattaaatac ggtgtagata ttagccagtt tgaaatttaa aggagaatca gagatggaac
      781 aagaacaaag agaattcctc gcatacattc attacatttt gaatatggag attagcaata
      841 cgtcagaaac atatacacac acgatcgaag aagcaggcaa aatcgaaact atagaagtca
      901 gtagagaaca acacttagaa gaggttatga aatgggcggc gcaagagatt gaaaaacact
      961 ttgatttagt gcctgaacca gaggattaat aaccataatc tgccaacaat cgaacaaaca
     1021 tcttaatagg aggaacaaca aatgttacaa aaatttagaa ttgcgaaaga aagaaataaa
     1081 ttaaaactca aattactaaa gcatgctagt tactgtttag aaagaaacaa caaccctgaa
     1141 ctgttgcgag cagttgcaga gttgttaaag aaggttaact aaattagacc ttattattac
     1201 tttttagaat gtgaacaata ggtcgataaa aaacttaata aacaaactat agcaactatc
     1261 aatgaatttt gaatatgtaa atcgttctcg tttatatagt ttgttacaaa gatttgaatg
     1321 tcagcacccg ccacaatgcc attagaccat cttattaact gtttgaaagg atgtggaaaa
     1381 tcatttttga tacgattgac aaatttatcg tttcttttat aggtaccttg ctcatttatt
     1441 ggataggtcg aattgatggc ttcagccaaa gtagagatag cagttggatt gatataaaaa
     1501 tctctaatgg tctgttgtgc ttgaagcact atctcatcat caaacctata gagttcctta
     1561 aaagatttta tcgcatcttc agaaaataaa tttctttgaa atgttagaga agaaaaagaa
     1621 ttacgcaaat taaaattcat ttcaattaag ttgtttagat gaaagtctac tttgaagtta
     1681 gaaaataaat ttaagttatt tttattaatt atatctaatt ggtacttaag ttttaaagac
     1741 tgtttaattg ccatgcttct agaaatttca acattattaa ttgcgttatt aatagataaa
     1801 cgaacatttt ttaaaggatc aatatacacc aatatcacct ccttaggttg ataacaacat
     1861 tatacacgaa aggaaagata gaaatgccaa aaatcatagt accaccaaca ccagaaaaca
     1921 catatagagg cgaagaaaaa tttgtgaaaa agttatacgc aacacctaca caaatccatc
     1981 aattgtttgg agtatgtaga agtacagtat acaactggtt gaaatattac cgcaaagata
     2041 atttaggtgt agaaaattta tacattgatt attcaccaac aggcactctg attaatattt
     2101 ctaaattgga agagtatttg atcagaaagc ataaaaaatg gtattaggag gatatgaaat
     2161 gagcaacatt tataaaagct acttattagc agtattgtgc ttcacagtct tagcgattgt
     2221 actcatgccg tttctatact tcactacagc atggtcaatt tcgggattcg caagtatcgc
     2281 aacattcata ttctataagg aatactttta tggggtggat gattaaatga cttggtttga
     2341 agaatacgtt aaacctagtg tggaatggga aagaaaggca gaacaagctg ttttaagtga
     2401 tgatgaagtt aaaacgatca ctgaatatag aaagaagtac aacaacccgc atatttacat
     2461 gtcggctcag aacagaaatt atcttgttga atatttagat agacatactg gagacatagt
     2521 attacacaat ttaaaactta agaaatcatc cagaagaaga gtgcatcaat atttaatggt
     2581 cggccaaata gtagtgccgg gcgaaccaaa aggcacaatt tatgaagcat ctctgataat
     2641 aagataaaaa aactgctact tgcgccaaca agtaacagag acaaacgatt agcaaaatta
     2701 attcacgttc aatataaaac gaaaaacgga ggaagtcaag atgtattacg aaataggcga
     2761 tgtatgtcag aaggtaatta atgtagacgg atttgatttt aaattagcag ttaagaagaa
     2821 ggaccacagc attctggtga atatcttaga tttagaagat aagtttatcg acggtataaa
     2881 tataacagat gagaatgatc tatacacagc attagacata ttaaatcaat ctatttatga
     2941 atggattgaa gagaacacag acgaaagaga caggctaatt aacttagtca tgaaatggta
     3001 ggaggtcgct atgaagcaga ctgtaactta catcatccgt catagggata tgccaattta
     3061 tataactaac aaaccaactg ataataattc agatgttagt tactccacaa atagaaatag
     3121 agctagggag tttaacggta tggaagaagc gagtatcaat atggattatc acaaagcaat
     3181 caagaaaaca gtgacagaaa ctattgagta cgaggaggta gaacatgact gaacaaacta
     3241 atcaagatgt cgatatttta acgcaactag gtgtaaaaga catcagcaaa caaaatgcaa
     3301 acaagtttta taaatttgcg atatacggca agttcggtac tggtaaaact acgtttttaa
     3361 caaaagataa caatgcctta gtactagata taaatgagga cggaacaacg gtaacagaag
     3421 atggggcagt tgtgcagatt aagaattata agcattttag tgcagtgatt aaaatgctgc
     3481 ctaaaattat tgaacaacta agagaaaacg gaaaacaaat tgatgtttta gtgattgaaa
     3541 caatccaaaa gttacgtgat atcactatgg acgacatcat ggacggtaaa tcaaagaaac
     3601 cgacatttaa tgattggggc gagtgtgcta cacgcattgt aagtatttat cgttatattt
     3661 ctaaattaca agaacattat caatttcatc ttgctataag cggacacgag ggcattaaca
     3721 aagacaaaga tgatgaggga agtactatca atccaacaat cacgatagag gcacaagacc
     3781 aaataaaaaa agcagtcatc agtcaatctg acgtgttagc aagaatgaca atagaagaac
     3841 atgagcaaga cggcgaaaaa acttatcaat atgtacttaa cgctgaacca tcaaatttat
     3901 tcgagacaaa gataagacac tcaagcaaca tcaaaattaa caacaaacgt ttcattaatc
     3961 caagtattaa cgatgttgta caagcaatta gaaatggtaa ttaaaaatta attaaaagga
     4021 cggtataaaa attatgaaaa tcactggtag aacacaatac attcaaggaa ctaatcaaga
     4081 ggcattcatg aaaggtgggg actttttagg agctggagaa tttacagtaa aagttgcaaa
     4141 tgtcgagttt aacgacagag aaaacagata cttcacgatt gtttttgaaa acaacgaagg
     4201 taaacaatac aaacacaacc aattcgtccc accattccaa caagatcatc aagaaaaaca
     4261 atatatcgag ttacttagta gattaggaat taaattgaac ttaccagatt taacttttga
     4321 cacagatcaa ttaattaaca aaatcggaac tattgtactt aaaaataaat ttaacgagga
     4381 acaaggcaag tattttgtaa gactctcata tgtaaaagtt tggaataaag acgatgaagt
     4441 agttaataaa ccagaaccta aaactgatga gatgaaacaa aaagaacagc aagcaaatag
     4501 gaaacagacg ccaatgagtc aacaatcaaa cccattcgct aatgctaatg gtccaataga
     4561 aatcaatgat gatgatttac cgttctagga cgtggtttaa atgcaataca ttacaagata
     4621 ccagaaagac aatgacggta cttattccgt cgttgctact ggtgttgaac ttgaacaaag
     4681 tcacattgac ttactagaaa acggatatcc actaaaagca gaagtagagg ttccggacaa
     4741 taaaaaacta tctatagaac aacgcaaaaa aatattcgca atgtgtagag atatagaact
     4801 tcactgggga gaaccggtgg aatcaattag aaaattatta caaacagaat tggaaattat
     4861 gaaaggttat gaagaaatca gtctgcgtga ctgttcaatg aaagtcgcaa aggagttaat
     4921 agaactgatt atagcgttta tgtttcatca tcaaatacct atgagtgtag aaacgagtaa
     4981 gttgttaagc gaagataaag cgttattata ttgggctaca atcaaccgca actgtgtaat
     5041 atgcggaaag cctcacgctg acctagcgca ttatgaagca gtcggtagag gtatgaacag
     5101 aaacaagatg aatcactacg acaaacatgt attagcgtta tgtcgcgaac atcacaacga
     5161 gcaacatgcg attggtgtta agtcatttga tgataaatat caattgcatg actcgtggat
     5221 aaaagttgat gagaggctca ataaaatgct gaaaggagag aaaaaggaat gaatagacta
     5281 agaataataa aaatagcact cctaatcgtc atcttggcgg aagagattag aagcgctaaa
     5341 aaaattaaaa aatttacccc tgaggattct aaaggttttc ctgatataac aaaagattca
     5401 ataaaagaac ctaaataaaa atattatggt tgataaaatc ccattgttct tttgttaacc
     5461 acccttgttt gttattgact atttctgtaa caaacagctt atctccagaa tcgagataag
     5521 gtttcaactt ttctatcatt tctgaagttg ataaagaaga acggaataaa aatgaagatt
     5581 tccaataatt gcaatgacca ttagaaattt ccttttttat aacatttctc aattcctcat
     5641 atttttgtcc gggtgagttt aaatcatatg ttaacatata aggtttttcc atattttatt
     5701 cacccccaat ctaacgcagt agcgataaca aaattatacc agaaaggaga taacgaaatg
     5761 gcaacattta gagtttacaa agaatcaggt aactttgtca cagtacacaa agattttata
     5821 catgattcta atataagttg gaaggctaaa ggtattctac tttatttgtt aagtcgacct
     5881 gataactggc aaatttacga aacagaacta gagcaacatt caactgatgg acttagcggt
     5941 ttaaagagtg gaatcaagga actggaagaa attggataca ttcaacgtag tagaaaacgt
     6001 gataaaagtg gtaggttaaa tggttatgag tacttagtat atgagcaacc gcaccacatt
     6061 cgattttcca acgttggaaa aaccgttaac ggtaaaacca acaatggaaa aaccgttaat
     6121 ggtaaatcgc atactactaa taataatagt actaataatg atttaactaa taataacaat
     6181 actaataatg aaggaagtat attgtcgggc aacccgacgg tgtcttccat tccctataaa
     6241 gaaattatcg aatacttaaa taaaaaagca ggaaagcatt ttaaacataa tacatctaaa
     6301 acaaaagatt ttattaaagc aagatggaat caagatttta ggttggagga ttttaaaaag
     6361 gtgattgata tcaaaacagc tgaatggtta aacacggata gcgataaata ccttagacca
     6421 gaaacacttt ttggcagtaa atttgagggg tacctcaatc aaaaaataca accaactggc
     6481 acggatcaat tggaacgcat gaagtacgac gaaagttatt gggattaggg ggatattatg
     6541 aaaccactat tcagcgaaaa gataaacgaa agcttgaaaa aatatcaacc tactcatgtc
     6601 gaaaaaggat tgaaatgtga gagatgtgga agtgaatacg acttatataa gtttgctcct
     6661 actaaaaaac acccgaatgg ttacgagtat aaagacggtt gcaaatgtga aatctatgag
     6721 gaatataagc gaaacaagca acggaagata aacaacatat tcaatcaatc aaacgttaat
     6781 ccgtctttaa gagatgcaac agtcaaaaac tacaagccac aaaatgaaaa acaagtacac
     6841 gctaaacaaa cagcaataga gtacgtacaa ggcttctcta caaaagaacc aaaatcatta
     6901 atattgcaag gttcatacgg aactggtaaa agccacctag catacgctat cgcaaaagca
     6961 gtcaaagcta aagggcatac ggttgctttt atgcacatac caatgttgat ggatcgtatc
     7021 aaagcgacat acaacaaaaa tgcagtagag actacagacg agttagtcag attgttaagc
     7081 gatattgatt tacttgtact agatgatatg ggtgtagaga acacagaaca tactttaaac
     7141 aaacttttca gcattgttga taacagagta ggtaaaaaca acatctttac aactaacttt
     7201 agtgataaag aactaaatca aaatatgaac tggcaacgta tcaattcaag aatgaaacac
     7261 aatgcaagaa aagtaagagt aatcggagac gatttcaggg agcgagacgc atggtaacca
     7321 aagaattttt gaaaattaaa cttgagtgtt cagatatgta cgctcagaaa ctcatagacg
     7381 aggcacaggg cgatgaaaat aagttatatg acctatttat ccaaaaactt gcagaacgtc
     7441 acacacgccc cgctgtcgtc gaatattaag gagtgttaaa aatgccgaaa gaaaaatatt
     7501 acttataccg agaagatggc acggaagata ttaaggtcat caagtataaa gacaacgtaa
     7561 atgaagttta ttcgctcaca ggagcccatt tcagcgacga aaagaaaatt atgactgata
     7621 gtgacctaaa acgattcaaa ggcgctcacg ggcttttata tgagcaagag ctaggattac
     7681 aagcaacgat atttgatatt tagaggtggc acaatgagta aatacaacgc taagaaagtt
     7741 gagtacaaag gaattgtatt tgatagcaaa gtagagtgcg aatattacca atatttagaa
     7801 agtaatatga atggcactaa ctatgatcgt atcgaaatac aaccgaaatt tgaattacaa
     7861 cctaaattcg ggaaacaaag accgattacg tatatagccg atttctcttt gtggaaggaa
     7921 gggaaactgg ttgaagttgt agacgttaaa ggtaaggcga ccgaagttgc caacatcaaa
     7981 gcgaagatat tcagatatca gtatagagat gtgaatttaa cgtggatatg taaagcgcct
     8041 aaatacacag gtcaagaatg gatggtatat gaggacttag tgaaagtcag acgtaaaaga
     8101 aaaagagaaa tgaagtgatt taatgcaaca acaagcatat ataaatgcaa cgattgatat
     8161 aagaatacct accgaagttg aatatcagca ttttgatgat gtggatgatg aaaaagatgc
     8221 actggcagat tacttatata acaatcctgg cgaaatacta gagtatgaca atttaaaaat
     8281 tagaaatgta aatgtagagg tggaataaat ggcgggcata aaaacgaaag tgagaataga
     8341 cggtaaattg atgacgctta ttgatgtatc ggataaatac gacatcaaag tatcgacatt
     8401 gattactagg tacgacagag gggcgagggg gaaagattta atacaaaatg tagtaaagcc
     8461 taagaaagta aaggttgacg gcaaaatgat gactgttagc gaaatagtta aaaagtacaa
     8521 cctaagcaaa ggactaatta attacagggt agcaaaaggg ctaacgggcg atgcgcttat
     8581 tgcgccacca caagaaaaac ccccttctaa atacactgaa tatgaaaatg agcagatgaa
     8641 aaagaaagga ctcacgcccg aaatagttag aaacagagtt gcgaagggtt gggagatgtc
     8701 ggaagcaatt gatgcacctt tcggcatgaa gctaaacgac tatagagaaa tacaaataac
     8761 aaaaactttg gagcgagagc gtgaaatggc taggcaacga cgtaaagaag ctgagctaag
     8821 aagaaagaag ccacatttgt ttaatgtacc tcaaaaacat tcacgtgatc cgtactggtt
     8881 cgatgtcact tataaccaaa tgttcaagaa atggagtgaa gcataatgag cataatcagt
     8941 aacagaaaag tagatatgaa tgaaatgcaa gacaatgtta agcaaccagc acattacaca
     9001 tacggcgaca ttgaaattat agattttatt gaacaagtta cggcacagta cccaccacaa
     9061 ttagcattcg caataggtaa tgcaattaaa tacttgtcta gagcaccgtt aaagaatggt
     9121 catgaggata tggcgaaagc gaagttttat gtcgatagag catttgattt gtgggagtaa
     9181 tggacatgac agatagcgca cgtaaagaat acttaaacca atttttcggt tctaagagat
     9241 atctgtatca gaataacgag cgagtggcac atatccatgt attaaatgac acttattact
     9301 ttcacgggca tatcgtacca ggttggcaag gcgtgaaaaa gacatttgat acagcggaag
     9361 agcttgaaaa atatataaag caacatggtt tggaatatga ggaacagaag caactaactt
     9421 tattttaagg agttggaaat gatgaaaatc aaaattgaaa aagaagtgaa tttacctgaa
     9481 cttatccaat gggcttggga taaccccaag ttatcaggta ataaaagatt ctattcaaat
     9541 gatgttgagc gcaactgttt tgtgactttt catgttgata gcatcttatg taatgtgact
     9601 ggatatgtat caattaacga taaatttact gttcaagagg agatataaca atgaaaatca
     9661 aagttaaaaa agaaatgaga ttagatgaat taattaaatg ggcgcgagaa aatccggatc
     9721 tatcacaagg aaaaatattt ttttcaacag gatttagtga tggattcgtt cgttttcatc
     9781 caaatacaaa taagtgttcg acgtcaagtt ttattccaat tgatatcccc ttcatagttg
     9841 atattgaaaa agaagtaacg gaagagacta agtttgatag gttgttagag gtatatgaga
     9901 ttcaagaagg agtctataaa tccgcattac acaaaggtat cagtttgaac gaacgttttg
     9961 aagacgacaa tatttttcct actaaagcat tctatatctt aaacgatgac atgacgatga
    10021 cattgatttg gaaagatggg gagttggtag aatgatgcaa acctataaag taagtctttg
    10081 tatcaagttc ttagcgtcta aatgtaatta taaattaaaa aagcattatt ttgtgcaaag
    10141 tacgaatgag gaagaagcca cgaatacggt attaaa
//
LOCUS       DAKPJH010000092        10086 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.092, whole genome shotgun sequence.
ACCESSION   DAKPJH010000092 DAKPJH010000000
VERSION     DAKPJH010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10086
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.092"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..397
                     /locus_tag="OY092_002036"
     CDS             <1..397
                     /locus_tag="OY092_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HCX1076964.1"
                     /translation="DLNIFESSGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATN
                     STGVAIAVGIVFYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKL
                     ELHELFIGNIAYISIFLILVVFIFKKKNI"
     gene            834..2798
                     /locus_tag="OY092_002037"
     CDS             834..2798
                     /locus_tag="OY092_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HCX1076965.1"
                     /translation="MTQITERELKKKYLDLLSQHFDTPEKLATEIINLESILELPKGT
                     EHFVSDLHGEYEAFQHVLRNGSGNVRAKINDIFKDKLSTKELNDLTALVYYPEDKLQL
                     IKCDFQNYGQLNVWYITTIEHLIQLIKYCSSKYTRSKLRRALPEQYVFIVEELLYKNN
                     EFKNKKSYYETLVNQVIELKQADDLIIGLAYSVQRLVVDHLHVVGDIYDRGPQPDKIM
                     DTLINYHSLDIQWGNHDVLWVGAYAGSKVCLANLLRICARYDNLDIVEDAYGINLRPL
                     LTLAEKYYDADNPAFKPKKRPDKHERLTQREESQITKIHQAIAMIQFKLEIPVIKRRP
                     NFEMDERLVLEKVNYDTNEITVYGKTYPLKDTCFQTVNRDNPAELLPEEEEVMNKLLL
                     SFQQSEKLRRHMSFLMRKGSLYLPYNGNLLIHGCIPVDENGEMESFEIDGQTYSGQEL
                     LDVFEYHVRKSFDEKENTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIADKASHK
                     EEKNPYYHLREDVNMVRKMLSDFGLNPDEGRIINGHTPVKEINGEDPIKADGKMLVID
                     GGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQQFNAKEKILSEGIDELSIKRIVDKELQ
                     RKKIRNTNKGKELQAQIDILKMLMHDRYLD"
     gene            3140..4219
                     /locus_tag="OY092_002038"
     CDS             3140..4219
                     /locus_tag="OY092_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076966.1"
                     /translation="MRILKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGVYSISGI
                     IVTGLLITLGGMIVMHTGHHLKSRNHSDSINYFLYPSIARGFDIILTMFMLSLAIIMT
                     AGGASTIHQSFNLPYWLSALILVAFILATLFLKFDRLIAVLGGVTPFLIAIVIMIAVY
                     YFTTSHLDFTAANNDAQIHKQKSLSPGWWFDAINYASLQIAAAFSFLSVMGSKVKYRD
                     STLYGGLIGGLIITFLLMMINLGLISQFDKIKHVDLPTLKLATQMSPSIGIIMSVIMI
                     LVIYNTVVGLMYAFASRFSVPFSRRYFIIIITMAVITYISTFIGFISLIGKVFPIMGL
                     FGFILLIPVLYKGLIKRITGKSHID"
     gene            complement(4324..4917)
                     /locus_tag="OY092_002039"
     CDS             complement(4324..4917)
                     /locus_tag="OY092_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1076967.1"
                     /translation="MEHIFREGQKGAPTLILLHGTGGDEFDLLPLGEALNENYHLLSI
                     RGQVSENGMNRYFKRLGEGVYDEEDLAFRGQELLTFIKEAAERYEFDIEKAVLVGFSN
                     GSNIAINLMLRSEAPFKKALLYAPLYPIEVTSTKNLSDVSVLLSMGKHDPIVPLAASE
                     QVINLFKTRGAQVEEVWVNGHEITETGLTAGQQILGK"
     gene            complement(4939..5907)
                     /locus_tag="OY092_002040"
     CDS             complement(4939..5907)
                     /locus_tag="OY092_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000183732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HCX1076968.1"
                     /translation="MANNHELLGIHHVTAITDNAERNYKFFTEVLGMRLVKKTVNQDD
                     IYTYHTFFADDVGSAGTDMTFFDFPDIPKGQAGTNSITRPSFRVPNDDALTYYEQRFD
                     EFGVKHEGIQELFGKKVLPFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYG
                     LGPIEIKVSYFDDFKNILETVYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAA
                     RQGYGEVHHVSFRVKDHDAIEAWATKYKEVGINNSGIINRFYFEALYARVGHILIEIS
                     TDGPGFMEDEPYETLGEGLSLPPFLENKREYIESEVRPFNTKRQHD"
     gene            complement(5985..6419)
                     /locus_tag="OY092_002041"
     CDS             complement(5985..6419)
                     /locus_tag="OY092_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1076969.1"
                     /translation="MDRTKQSLNVFVGMNRALDTLEQITKEDVKRYGLNITEFAVLEL
                     LYNKGPQPIQRIRDRVLIASSSISYVVSQLEDKGWITREKDKDDKRVYMACLTEKGQS
                     QMADIFPKHAETLTKAFDVLTKDELTILQQAFKKLSAQSTEV"
     gene            6646..6930
                     /locus_tag="OY092_002042"
     CDS             6646..6930
                     /locus_tag="OY092_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCX1076970.1"
                     /translation="MSNLEIKQGENKFYIDDDENHALAEITYRFVDNNEINIDHTGVS
                     DELGGQGVGKKLVKAVVEHARENHLKIIASCSFAKHMLEKEDSYQDVYLG"
     gene            7104..7910
                     /locus_tag="OY092_002043"
     CDS             7104..7910
                     /locus_tag="OY092_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1076971.1"
                     /translation="MAFHDKTATQVTNIELNVRDLDLMTTFYKNILGLSVKSSDDNTT
                     VLSVGTGGHTLTLHLLEDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGA
                     GDHLVSEALYFNDPEGNGIEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGW
                     QGMPAKGMIGHLHLKTHDLDAAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTW
                     QSNQARQNNAQSYGLTHVDIYQPDASTHTFTAPEGFGITVHSNTDLVPEK"
     gene            complement(8030..8703)
                     /locus_tag="OY092_002044"
                     /pseudo
     CDS             complement(8030..8703)
                     /locus_tag="OY092_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501288.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            8973..9965
                     /locus_tag="OY092_002045"
     CDS             8973..9965
                     /locus_tag="OY092_002045"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCX1076972.1"
                     /translation="MTKIMFFGTRDYEKEMALNWGKKNNVEVTTSKELLSSATVDQLK
                     DYDGVTTMQFGKLENDVYPKLESYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYS
                     PETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAA
                     TAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDK
                     AMFNHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYFTNDWTNKD
                     IDDKTLLELIEHERILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCETRLN"
BASE COUNT         3234 a         1823 c         1621 g         3408 t
ORIGIN      
        1 tgatttaaat atatttgaaa gtagcggtaa tcaattatct ttattgaatc aattattatt
       61 agttagttta ggcacatttg ttggcgtttg gttagtttta agcttaacgt tgctattatc
      121 atctgcaaca aattcaacgg gtgtagccat tgctgtaggt attgtttttt attttgcaag
      181 ttctatttta gcagttattc aaacggcact tttagaaaaa atagactggc taaagtggaa
      241 tcctattaat atgatgaata ttatgcttca aacagttgaa aaaggcttta gtaagtcgac
      301 aaaattagaa cttcatgaat tgtttattgg taatattgct tatatttcta ttttcttaat
      361 acttgtagta tttattttca agaagaaaaa tatttagtaa cttaaagtat tagatgaata
      421 aatacacaca gattccatcg taattcaaaa tcattttcaa atcccttcac cataatggtg
      481 cggggatttt tgatatgtca gcataccact cattctatct tttatatatt ccagaatccc
      541 cccacttgta atgtacaaaa tatgctcact tatacgataa tcgtatctct gccaagctat
      601 ttcaactctg cttcaacaac tttatcactt cacatttatg cgggtacact tcaacgctac
      661 taatatgaat gatacaacca tagattctca acactaaaat tcacaatatg tttactctat
      721 ttttatcaat tcaagcatac ttattgaaaa atgttaacgt tttcttgata atcattgtaa
      781 gcgtattaat tttacaaacc aatgattgaa atatactaca ggagtgacac acaatgactc
      841 aaattactga aagagaatta aaaaagaaat atttggattt attatctcaa catttcgata
      901 ctccagaaaa gcttgcgact gaaattatta atttagaatc tattctagaa ttgcctaaag
      961 gtacggagca tttcgtcagc gatttacatg gtgaatatga agctttccaa cacgtattac
     1021 gcaacggttc tgggaacgtg cgagcgaaaa tcaatgatat tttcaaagac aagttatcaa
     1081 cgaaagaact taacgatttg actgcccttg tttactatcc agaagacaaa ttgcagctta
     1141 ttaaatgcga ttttcaaaat tacggacaat taaatgtttg gtatattacg acgattgaac
     1201 atctcattca gctaattaaa tattgttctt caaaatatac gcgttcaaaa cttcgacgtg
     1261 ccttgccgga gcaatacgtt ttcatcgtag aagagttatt atataaaaac aacgaattca
     1321 aaaataaaaa atcttactac gaaacacttg taaatcaagt gattgagctt aagcaagcgg
     1381 atgatttaat tatagggctt gcgtattctg tacaacgctt agtcgtcgat catttacacg
     1441 ttgtcggcga tatttatgat cgtggcccgc aaccagataa aatcatggac acgctgatta
     1501 attatcattc tctggatatt caatggggta atcatgatgt gctatgggtt ggtgcttatg
     1561 cagggtctaa agtatgttta gctaatttac tacgtatttg tgcacgttat gacaatctag
     1621 atatcgttga agatgcttac ggtattaatt taagaccttt gctaacatta gccgaaaaat
     1681 actatgatgc agataatcct gcttttaaac ctaaaaaaag acctgataaa catgaacgtt
     1741 taacacaacg cgaagaaagt cagattacta aaattcatca agctattgcg atgattcaat
     1801 tcaaactgga aataccggtt attaagcgcc gtccaaactt tgaaatggac gaacgacttg
     1861 tacttgaaaa agttaattac gatactaatg aaataacagt atacggaaaa acatatccat
     1921 taaaagatac atgcttccaa actgttaacc gtgataaccc agcagaatta ctacctgaag
     1981 aagaagaagt catgaataaa ctattattgt cattccagca atctgaaaaa ttacgtcgtc
     2041 atatgtcttt cttgatgcgt aaaggctcac tttacttacc ttataatggc aatttactca
     2101 ttcatggttg tattccagtt gatgaaaatg gtgagatgga atcattcgaa attgatggtc
     2161 agacatacag tggccaagag ttattagatg tgtttgaata tcatgtccgt aaatcatttg
     2221 atgaaaaaga aaatactgat gacttatcca ctgatttagt ttggtattta tggactggga
     2281 aatattcttc actatttggt aaacgtgcga tgactacgtt tgagcgatat tttattgcag
     2341 ataaagcttc tcataaagaa gaaaaaaacc cgtactatca tctacgtgaa gatgtgaata
     2401 tggttcgtaa aatgctcagt gattttggat taaatccaga tgaaggacgc attattaatg
     2461 gtcacacacc agtgaaagaa attaatggcg aagatcctat caaggctgat ggaaaaatgc
     2521 ttgtcattga tggtggcttt tcaaaagctt atcagtcaac aactggcatt gcaggttata
     2581 cattgttgta taattcattc ggaatgcaac tcgttgcaca tcaacaattt aacgcaaaag
     2641 aaaaaattct ttccgaaggt atcgacgaac tgtcaattaa acggattgtt gataaagaat
     2701 tgcaacgtaa aaaaatccgt aatacaaata aaggtaaaga gcttcaagct caaatagata
     2761 ttttgaaaat gttaatgcat gatcgttact tagactaaag acgacatttg gtgcatgcat
     2821 cgtgcactta cttaatggta ctttgtttac gcattggcta cgcaaacgcg atggtaaata
     2881 gtcgacctaa ctacaccgaa aaatcccctc actattgcga gtagtgaggg gattggtgta
     2941 tctatgctag ttcctgttaa ctgtattata acaacttcac agcaaaaaaa tgcaaaatca
     3001 actaataaat taatgaaatg accgacgccc tcgcttctac tccaatttaa caaaatacta
     3061 tattagtact atatttttca ttaacatgta tgttacattt tctatattac ttaaaattac
     3121 gaagggacat ttttaaatca tgcgtatctt aaaagagtcc attattgtgg catttgcctt
     3181 tgttggtgtt gtcgttggtg ccggctttgc tactggtcaa gaaattttcc agtttttcac
     3241 aagtcatggc gtgtatagca tttcaggcat tattgtgaca ggactattga ttactttagg
     3301 tggaatgatt gtcatgcata caggtcatca tctaaagtct agaaatcatt ctgattcaat
     3361 taactatttc ttatatccct ctattgcaag aggttttgat attattttga caatgtttat
     3421 gttgtcttta gctattatta tgactgcagg tggcgcttca accattcatc aaagtttcaa
     3481 cttaccgtat tggctgagcg cactcatatt agtcgccttt attttagcaa cactgtttct
     3541 aaaattcgat cgtttaattg ctgtgcttgg cggtgttacc ccatttttaa ttgcgattgt
     3601 cattatgatt gcggtctact atttcacaac gagtcatctt gattttactg ccgctaataa
     3661 tgatgctcag attcataagc agaaatcatt atcacctgga tggtggtttg atgcaattaa
     3721 ctatgcaagc ttgcaaattg ctgctgcctt cagcttctta tcagtgatgg gtagtaaagt
     3781 taagtatcgt gactcaacgt tatacggggg cttgattggc ggtttaatca ttacattttt
     3841 actcatgatg attaacctag gtttaatttc tcaattcgat aaaattaaac acgtcgactt
     3901 acctacatta aaattagcga cacaaatgtc tccgtcaatc ggtattatta tgtctgtcat
     3961 tatgatactt gtcatctaca atactgttgt tggattaatg tatgcatttg cgtcacgttt
     4021 cagcgttcca tttagcagac gttacttcat cattattatt acaatggctg tcatcactta
     4081 tattagtaca tttatcggtt tcatttcatt aattggaaaa gtattcccta ttatgggatt
     4141 gttcggtttc atcttactca tacctgtact ctataaaggt ttaattaagc gtattaccgg
     4201 caaatctcat atcgattaaa atatctatac tattgtaaaa tttagtacaa cacttcaaaa
     4261 tcaaaaaagc gggcagatga aaagtaaaaa tcttttccat ctgtccgctt cttaatagaa
     4321 ctgttatttc ccaagtattt gttgaccagc cgttaatcca gtttctgtaa tttcatgacc
     4381 attcacccaa acttcttcga cttgtgcccc acgtgtctta aacaagttaa tgacttgttc
     4441 acttgcagct aatggtacaa ttggatcatg tttccccata gaaagcaaca cactgacatc
     4501 tgataaattc ttcgttgacg ttacttcaat tggatataac ggtgcatata acaatgcttt
     4561 tttaaatggt gcttctgaac gcaacattaa gttaattgct atatttgatc catttgaaaa
     4621 tccaacaagc acagcctttt caatatcaaa ttcataacgt tcagcagctt ctttaatgaa
     4681 cgttaacaat tcttgtccac gaaatgccaa atcttcttca tcataaacac cttcaccaag
     4741 acgtttgaaa taacggttca tcccattttc tgaaacttgt cctctaatac ttaacaagtg
     4801 ataattttca ttcaatgctt cgcctaatgg caataaatcg aactcatcac cacctgtacc
     4861 atgcaacaat attagcgttg gcgcaccttt ttgtccttca cgaaaaatat gttccatcac
     4921 aaatcctcct cattccaatt aatcatgttg acgcttcgta ttaaaaggtc taacttccga
     4981 ttctatatat tctcttttat tttctaaaaa tggtggtaat gataaccctt cgcctaatgt
     5041 ttcataaggt tcatcttcca taaatcctgg tccatctgtt gaaatttcta ttaaaatatg
     5101 ccccacacgt gcatataatg cttcaaaata gaaacgatta atgatgcctg agttgttaat
     5161 acctacctct ttatatttcg ttgcccacgc ttctattgca tcatgatctt tcacacgaaa
     5221 tgacacatga tgtacctcac cataaccttg acgtgctgct ggccctttat catcttttat
     5281 taagattacc tggccaccat tgcctccttc gccaacttca agtaatgcga cattatcttc
     5341 atgcgcaata gttgtcatac cgtaaacagt ctctaaaata tttttaaagt cgtcaaaata
     5401 acttacttta atttcaatgg gtcctaatcc ataaatcgct ttatctactg gaaccggtcc
     5461 attcttccaa ggtacaccag gtgctacacc ttcatttaac tcatctgaaa ttaattgata
     5521 cacttggcca tcgacttctt caaatggcaa cactttttta ccaaatagtt cttgaatacc
     5581 ttcgtgtttg acaccaaact catcaaagcg ctgttcataa tatgttaatg cgtcatcgtt
     5641 aggcactcta aaagacggtc ttgtaataga atttgttcca gcctgccctt taggaatatc
     5701 tgggaaatcg aagaatgtca tatctgtacc tgctgaacct acatcatctg caaaaaatgt
     5761 atgatacgta taaatatcat cttgattgac tgtcttttta actaagcgca tgcctagtac
     5821 ttctgtaaaa aatttataat tacgttctgc attatctgtt attgcagtaa catggtgaat
     5881 acctaataat tcatgattat ttgccatttt atataccctc tttgtctttt tagtgtattt
     5941 atctcgaaat cgagatattt taatgtaaat ttttagtgca cgccttacac ttctgtagat
     6001 tgtgcactta gtttcttaaa cgcttgttgt aagattgtta attcatcctt tgttaacaca
     6061 tcaaacgctt ttgttaatgt ctcagcatgc ttagggaaaa tatctgccat ttgactttga
     6121 cctttttcag ttaaacaagc catatataca cgtttatcat ctttatcctt ttcacgtgta
     6181 atccaacctt tgtcctctaa ttgacttaca acatatgaaa tgctgctact tgcaattaat
     6241 acgcggtctc taatacgttg aattggttgc ggacctttat tataaagcaa ctcaagcact
     6301 gcaaattcag taatatttaa tccataacgt tttacgtctt cttttgtaat ttgctctaat
     6361 gtgtctaatg ctctattcat tccgacaaag acattgagcg attgtttcgt tcgatccata
     6421 tcatcaccaa ctttttcatt ttatttcgat ttcgagataa attatatagc tgaatagatt
     6481 taatgtcaag atacgtgttt tcatctttat ttcaaactgc gcttaataaa aacgactaca
     6541 taaatgtggc aatgtcgtca catgactgtc atgcaccttt gacttcgttt aagttaaaat
     6601 agaataggga aatactataa tcaatcatga taggagttga tatgtatgag taaccttgaa
     6661 attaaacaag gcgagaacaa attctatatt gatgatgatg aaaatcatgc tttagctgaa
     6721 atcacatacc gttttgtgga taataatgaa attaacattg atcatacagg cgtatctgat
     6781 gaactcggtg gtcaaggtgt tggcaaaaaa ctagttaaag cagttgttga acatgctcgc
     6841 gaaaatcatt taaaaatcat tgcctcatgt tcatttgcca aacatatgtt agaaaaagaa
     6901 gattcatatc aagatgtata tcttggttaa ataaattttg cgatggtgca actgtgccat
     6961 cgctttttat ttgttcgcat caatataaaa ttgcaaaacg actagttatt ttgcatttca
     7021 aactttatgc tgtcaattca ttttcttttc tggtatactt tttatactaa cttatagaaa
     7081 aatagaaaaa gaggcgatgc ataatggcat ttcacgataa aacagcaaca caagtgacaa
     7141 acattgaact gaacgtaaga gacttagact taatgacaac attttacaaa aacattttag
     7201 gactatccgt taaaagttct gacgataaca caaccgtatt atctgttggg actggtggcc
     7261 atactctaac gttacattta ttagaagacg gccgtcagac ttccccacgt gaagcaggac
     7321 tttttcatat agcattttta ttaccaacta ctgaggatct agctaacttc ttatatttcg
     7381 tggcacaaaa aaatatgggc attggcgctg gtgatcattt agtcagtgaa gctttatatt
     7441 tcaacgaccc cgaaggtaat ggtattgaag tctatcgcga tagaccttca tcttcatggg
     7501 aatggcaaaa tggcaaagtt aaaatggata ctttagaagt tgatagccaa actttattaa
     7561 cacatcgtac tgatgaaggt tggcaaggaa tgccagcaaa aggcatgatt ggacacttac
     7621 atttaaaaac acatgattta gacgcagcat atcaatgtta cattgaacaa ttaggattcc
     7681 aacatgtgtc tgattttcca cgtgcgctat ttatgtcaac gaatcactat caccatcata
     7741 ttgccgctaa cacttggcaa tctaatcaag caagacaaaa caatgcacaa agttatggat
     7801 taacacatgt tgatatttat caacccgacg cctcaacaca tacatttacg gcaccagaag
     7861 ggtttggcat cacagttcat tcaaatactg accttgttcc agaaaaataa acatccatac
     7921 tttattaata caattttttc acgcaaaagc ctgcgattca tttatgtaat cgcaggcttt
     7981 tttattgcta actttttaat tttatatatt tagacatacg gtattctatt tattcttttg
     8041 gtccaaccca ttcaataaca tcttcataag cttggcgtgt tttatttttc ggtggatctt
     8101 gttgtctgta gccaaatgca accatcactg ataaaccaaa ttgctcagta tctaagatac
     8161 ctttatttgc taaaatgtct gtcactgtat ccagactaaa accttccatc gggcatgaat
     8221 caatacctaa taatgcagct gtcgtcatct catattgcct aatgcgatat acgtttgttt
     8281 acttgaccaa tcatacaagg cttgatcatt atcggaaata tgaaaatctg cttggaatgc
     8341 atcgaatttt tgttcaacag ctggaatcgt ttgtgcctca tattttttaa tatctcttaa
     8401 catatgttgt acatacggtg atcttgacgt tacattttta cgcgcaaaaa ttagcacaaa
     8461 atggctcgct gtatctaatt gctttgctgc gccccaactg tgcgctttta attcatcacg
     8521 taacgcttga tcttgaatca cgacaaactt ccaaggttct aacccaagag aacttggaga
     8581 caatctacct gactctaata ttgtttcaaa atcttctttc gaaactttct tttgtggatc
     8641 gaattgctta gtcgcatgtc tgaaatgaaa tgcatccata attgtttgat tcatattgct
     8701 cattgaacat agcctccaat ttttatattt attactatac aaattatact tcatgtttta
     8761 aaaagactaa agtaatccgt ttgcaattca ctataacttg tgtacatgtt ataagttttc
     8821 tgcaataaaa cacacttttg aattttggaa aatttagtgt tataatatat ttgtgatatt
     8881 tttcacaatt aaattgtggc gtgattttaa tgtacataat ctttaatttc actcatttac
     8941 ttttcaatct tttaaaagcg aggtttttaa taatgacaaa aattatgttc tttggtacgc
     9001 gtgattatga gaaagagatg gcattaaatt ggggaaaaaa gaataatgtc gaagtaacta
     9061 cttctaaaga gctattatca agtgctacag tcgatcaatt aaaagattac gatggcgtaa
     9121 ctacaatgca atttggtaag ttagaaaatg acgtttatcc taaattagaa tcttacggta
     9181 ttaaacaaat tgcacaacgt actgctggat ttgatatgta tgatttagat ttagctaaaa
     9241 aacacaacat tgtgatatct aacgttccta gttattcacc tgaaacaatt gcagagtatt
     9301 ctgtttctat cgccctacaa ttagtgcgtc gcttcccaga tattgaacgc cgtgtacaag
     9361 cacatgattt tacttggcaa gcagaaatca tgtctaaacc agttaaaaat atgactgttg
     9421 caattattgg tacgggtcgt atcggtgctg ctacagctaa aatatatgca ggatttggtg
     9481 ctacaattac agcttatgac gcctatccta ataaagattt agacttttta acttataaag
     9541 atagtgttaa agaagctatt aaagatgccg atattatttc tttacatgtt ccagcgaaca
     9601 aagaaagcta tcatttattc gataaagcaa tgtttaatca tgtgaaaaaa ggtgcaatct
     9661 tagttaacgc agcacgtggt gcagtcatca atacacctga tttaatcgct gcagtgaacg
     9721 atggtacttt gttaggtgct gcgattgata cttatgaaaa tgaagcagca tacttcacaa
     9781 atgactggac taataaagac attgacgata aaacattatt agagttaatc gaacatgaaa
     9841 gaattttagt aacaccacat attgctttct tctctgatga agcagtacaa aaccttgttg
     9901 aaggtggttt aaacgcagca ttatctgtca ttaacactgg tacatgtgaa acacgtttaa
     9961 attaatatat atttaaacag gctgggacat aaatccctaa aaaacagcag taagataatt
    10021 ttcaattaga agatatctta ctgctgttct atatttatac aatacttcgt attgaatggc
    10081 ttcgct
//
LOCUS       DAKPJH010000093        10015 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.093, whole genome shotgun sequence.
ACCESSION   DAKPJH010000093 DAKPJH010000000
VERSION     DAKPJH010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10015
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.093"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(132..1061)
                     /locus_tag="OY092_002046"
     CDS             complement(132..1061)
                     /locus_tag="OY092_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001574632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCX1076973.1"
                     /translation="MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGT
                     ICLIILNIIINPEVFTIHFYNNQSFNNTWIVGGLLGVSFLTGNLLLLPKLGATLTVIA
                     TVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIIGIVIMNQFNKNNLLLTDQKY
                     LLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSITLLILTAIFNRSL
                     KLNTYHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILID
                     HFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF"
     gene            complement(1257..1481)
                     /locus_tag="OY092_002047"
     CDS             complement(1257..1481)
                     /locus_tag="OY092_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499185.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2922 domain-containing protein"
                     /protein_id="HCX1076974.1"
                     /translation="MTKTLELSFKSSLDKPVKLQLPQLNNIVTEQVARDSMNALVDLN
                     IIKSNSGAITKVHSAQIIDKTTTVLFEAKK"
     gene            complement(1498..1701)
                     /locus_tag="OY092_002048"
     CDS             complement(1498..1701)
                     /locus_tag="OY092_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076975.1"
                     /translation="MSKTNHITIVLSFTKLDTNGKQTEFKRRFANINPEVSNDQIKTF
                     SKLIERLTGETYNNIEVIKSVSI"
     gene            1856..2416
                     /locus_tag="OY092_002049"
     CDS             1856..2416
                     /locus_tag="OY092_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCX1076976.1"
                     /translation="MNKVEVIKCNDDINKMYDALKARSDRDYLFFKLAIHSGMKITEL
                     LTITVKDTKRLIEKGTLSELCKAHYHSLIKIRLPETLSNELLHYIENKSLSNEDVLFQ
                     SLRTNQVLSRQQAYRIIHQAAIKAGIENVGLTTLRKTFAYHAYQKGIPIPVIQKYLGH
                     QSAIETLNFIGLENECEHSIYISLQL"
     gene            2435..4837
                     /gene="mnhA2"
                     /locus_tag="OY092_002050"
     CDS             2435..4837
                     /gene="mnhA2"
                     /locus_tag="OY092_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit A"
                     /protein_id="HCX1076977.1"
                     /translation="MSLVYLLIAVLVIMAMILLTSKRRAMAKYAGYIALTAPVIASIY
                     FLLQVPSVIKQHYLSVSVPWMTSLDINVDLRLDGLSLMFSLIISLIGIAVFFYATQYL
                     SSRKDNLPRFYLYLTLFMFSMLGIVLADNTILMYVFWELTSVSSFLLISYWYNNGDSQ
                     FGAMQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHALFIPMIIMFLL
                     GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYI
                     VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQNAIASI
                     YVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIA
                     ALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMISIVFVGVIASVFTFTYALYM
                     VKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKGIIVPALRAV
                     SGGNHQIDQLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIRQISVSK
                     SYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVS
                     EFGALEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLV
                     VETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLLMALIVVSLIFITQQTDGLSS
                     ISDFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQDE
                     RE"
     gene            4824..5249
                     /gene="mnhB2"
                     /locus_tag="OY092_002051"
     CDS             4824..5249
                     /gene="mnhB2"
                     /locus_tag="OY092_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit B"
                     /protein_id="HCX1076978.1"
                     /translation="MKENDVVLRTVTKLVVFILLTFGFYVFFAGHNNPGGGFIGGLIF
                     SSAFILMFLAFNVEEVLESLPIDFRILMIIGALVSSITAIIPMFFGKPFLSQYETTWL
                     LPILGQIHVSTITLFELGILFSVVGVIVTVMLSLSGGRS"
     gene            5246..5590
                     /gene="mnhC2"
                     /locus_tag="OY092_002052"
     CDS             5246..5590
                     /gene="mnhC2"
                     /locus_tag="OY092_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit C"
                     /protein_id="HCX1076979.1"
                     /translation="MNLILLLVIGFLVFIGTYMILSINLIRIVIGISIYTHAGNLIIM
                     SMGTYGSSRSEPLITGGNQLFVDPLLQAIVLTAIVIGFGMTAFLLVLVYRTYKVTKED
                     EIEGLRGEDDAK"
     gene            5580..7076
                     /gene="mnhD2"
                     /locus_tag="OY092_002053"
     CDS             5580..7076
                     /gene="mnhD2"
                     /locus_tag="OY092_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit D"
                     /protein_id="HCX1076980.1"
                     /translation="MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTII
                     SLMLLIYVQRHRPITLDFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGE
                     HKANRYHLPSFILFLSVGVIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAA
                     IIYVVLNIIGSWLFLLGIGLLYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFS
                     AKAALVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLA
                     TMAAITMVIGAIGVIAYKDIKKIAAYQVIISIGFIILGLGTNTFAGINGAIFYLVNDI
                     VVKTLLFFIIGSLVYITGYRQYQYLNGLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGK
                     VLIFQGALQNGNYIGLALMIITSLIAMYSLFRILFYMYFGDKDGEEVNFKKIPLYRKR
                     ILSILVVVVIAIGIAAPVVLNVTSDATELNTSDQLYQKLVNPHLKGED"
     gene            7077..7559
                     /gene="mnhE2"
                     /locus_tag="OY092_002054"
     CDS             7077..7559
                     /gene="mnhE2"
                     /locus_tag="OY092_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit E"
                     /protein_id="HCX1076981.1"
                     /translation="MNQIVLNIIIAFLWVLFQDEDHFKFSTFFSGYLIGLIVIYILHR
                     FFSDDFYVRKIWVAIKFLGVYLYQLITSSISTINYILFKTKDMNPGLLSYETRLTSDW
                     AITFLTILIIITPGSTVIRISQDSKKFFIHSIDVSEKEKDSLLRSIKHYEDLILEVSR
                     "
     gene            7556..7858
                     /gene="mnhF2"
                     /locus_tag="OY092_002055"
     CDS             7556..7858
                     /gene="mnhF2"
                     /locus_tag="OY092_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit F"
                     /protein_id="HCX1076982.1"
                     /translation="MIQTITHIMIISSLIIFGIALIICLFRLIKGPTTADRVVTFDTT
                     SAVVMSIVGVLSVLMGTVSFLDSIMLIAIISFVSSVSISRFIGGGHVFNGNNKRNL"
     gene            7833..8270
                     /gene="mnhG2"
                     /locus_tag="OY092_002056"
     CDS             7833..8270
                     /gene="mnhG2"
                     /locus_tag="OY092_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit G"
                     /protein_id="HCX1076983.1"
                     /translation="MEITKEIFSLIAAVMLLLGSFIALISAIGIVKFQDVFLRSHAAT
                     KSSTLSVLLTLIGVLIYFIVNTGFFSVRLLLSLVFINLTSPVGMHLVARAAYRNGAYM
                     YRKNDDHTHASILLSSNEQNSTEALQLRAKKREEHRKKWYQND"
     gene            8610..>10015
                     /locus_tag="OY092_002057"
     CDS             8610..>10015
                     /locus_tag="OY092_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HCX1076984.1"
                     /translation="MEIFETILIFIAVVILSSFVHTFIPKVPLAFIQIFLGMLLFITP
                     IPVQFNFDSELFMVTMIAPLLFVEGVNVSRVHLRKYIKPVMMMALGLVITTVIGVGLF
                     IHWIWPDLPIGAAFAIAAILCPTDAVAVQAITKGKVLPKGAMTILEGESLLNDAAGII
                     SFKIAVGVLVTGAFSLVDAVQLFLIASIGGAVVGLLIGMALVRFRLTLMRRGYENINM
                     FTIIQLLTPFVTYLIAELFHASGIIAAVVAGLVHGFERDRIMQVRTQLQMSYNHTWNI
                     LGYVLNGFVFSILGFLVPEVIIKIIKTEPHNLIFLIGITIVVALAVYLFRFVWVYVLY
                     PYFYLAISPFQKMMTKNDDDNPTTEKPPKRSLYALIMTLCGVHGTISLAIALTLPYFL
                     AGHHAFTYRNDLLFIASGMVIISLVVAQVLLPLLTKPAPKTVIGNMSFKVARIYILEQ
                     VIDYLNQKSTFETSFKYG"
BASE COUNT         3249 a         1408 c         1733 g         3625 t
ORIGIN      
        1 ctaaattaaa atttgttgtg tcaaagcata ctacccatat tagtacttat taaaactaat
       61 ttagaccaca aaaaaatagc ttatcacttt taaaaataat tacaagttaa aatgataagc
      121 taaaagttaa tttaaaataa tcttaaaagt ataatgcctg tcaaaataca taatagacca
      181 atagtttttc tggatgtcat tgctatttta ggtgaaccaa ataatccaaa gtgatctatc
      241 aatatgccca ttagaatctg accaaacatc ccaataagtg ttgttaatgc tgcacccata
      301 tgaggcatta agataatgtt agctgttaca aaagccatgc ctagtatacc gccagtaaaa
      361 tagataggtt ttagtttgcc gaatttcaaa tgatatgtat ttagttttaa agaacgatta
      421 aaaatagcgg ttaaaatcaa tagcgttatt gacccaattg taaatgatac taatgatgca
      481 aaggctggtg aatgagtatg acttgctaaa gcactattaa ttgtcgtttg aataggtgga
      541 aagaaaccaa aaataaatcc taatagaagc caaaacagta aatacttttg atcagttagt
      601 aataaattat tcttgttaaa ttgattcatt atgacgatac cgataatgag taacaataca
      661 ccaattgctt taattaaatt aaaatcatga attgtagcac caaataagcc aaatgtatca
      721 attatgacac ccataataat ttgacccgca actgttgcaa ttacagttaa tgttgcacct
      781 aattttggca ataacaataa attgccagtt aaaaagctaa ccccaagcaa accaccgact
      841 atccatgtat tgttaaatga ttgattattg taaaagtgaa tagtaaatac ttctggattg
      901 ataatgatat ttaaaataat taaacaaatt gttccaactg aaaatgaaat gaatgaagta
      961 tagaaaggcg atttagtata cagtgatagt cttgaattga cagatgtttg gataggaata
     1021 agcattccaa ctaggacacc aatgatatag aaaagaagca tatgaataaa gtctcacttt
     1081 ccaaagttaa taataaaaat catatgtata cattatcatt atagagaaaa tatacaactc
     1141 atttacaata atgttgaaaa aaacagggca ttaacacaac aaaaacaccc tagacaatca
     1201 tcatgaaagt ctagggtgtt agtatttata ctaaattaat tgcgctttct ttatatctat
     1261 ttctttgctt caaataaaac ggtcgtcgtt ttatcaataa tttgagcaga atgtactttg
     1321 gtgatagcgc cactatttga ctttataata tttaaatcta ctaatgcatt catactatca
     1381 cgtgcaactt gctcggttac gatgttgttt aattgtggta attgcaattt gacaggtttg
     1441 tctagtgaag atttaaaact taattcaagt gttttggtca tgaaagtgtc ctcctgatta
     1501 aattgataca gatttgatga cttcgatgtt gttgtatgtt tctccagtaa gtcgttcgat
     1561 aagtttgcta aatgttttaa tttggtcgtt tgatacttca ggattaatat tggcgaatcg
     1621 acgcttaaat tctgtttgtt taccatttgt atctagtttt gtaaatgata atacaattgt
     1681 aatgtgattt gttttactca tattttaaaa cctcctttca cactatatat cgaaagaaaa
     1741 aaataattgg gttaatttta ttattcttgt ttaaattcta taaaaaaggt tataattata
     1801 tgtgacttaa atacttaatg tttatgatta agacacttaa agcgaggtgg gacatatgaa
     1861 caaggtagaa gtaattaaat gcaatgatga tattaataaa atgtatgacg cactcaaagc
     1921 tcgatctgat agggattatt tgttttttaa attagctata catagtggta tgaaaattac
     1981 agaattatta acaattactg ttaaagatac taaacgactg attgaaaagg ggacactaag
     2041 cgaattgtgt aaagcccatt atcactcatt gattaaaatt agattgccag aaacattatc
     2101 taatgagtta cttcactata ttgaaaacaa aagtctgtca aatgaagatg tattatttca
     2161 atcattgaga actaatcaag tattatctag gcaacaagcc tatcgtatta ttcatcaagc
     2221 agcaattaag gctggcatag agaatgtagg actaacgaca ttgcgtaaga catttgcgta
     2281 tcatgcatat caaaagggca tacctattcc tgtcattcaa aagtatttag ggcatcaatc
     2341 tgctattgaa acactaaatt ttatcggttt agaaaatgaa tgtgaacaca gtatttatat
     2401 ttcattacaa ttataacgac aaaggaggct aataatgagt ttggtttatc tattaattgc
     2461 cgtactagta attatggcga tgatattatt aacatctaaa cgtagagcaa tggctaaata
     2521 tgcaggatac atagcactga ctgcacctgt aatagcatct atttattttt tgttacaagt
     2581 tccatcagta attaaacagc attatttgtc tgtttccgtt ccgtggatga cctcattaga
     2641 tattaatgta gatttacgtt tagatggttt gagtttaatg ttttctctta ttatttcact
     2701 tattggaatt gctgtattct tctatgcaac acaatattta tcctctcgta aagataattt
     2761 accaaggttt tacttatact taacgctatt tatgtttagc atgctcggta ttgtattagc
     2821 tgataataca atattaatgt atgtgttttg ggaactaact agcgtatcat catttctatt
     2881 aatttcatat tggtataaca acggagatag tcaatttggt gcgatgcaat catttatgat
     2941 tacagtattt ggtggtttgg cattattagt tggttttatc atgttgtata tcatgacagg
     3001 aacgaataac atcacagaga tattaggaca agcagatcat attaagaacc atgctttatt
     3061 tatccctatg attatcatgt ttttattagg tgcatttaca aagtctgcac aattcccatt
     3121 tcatatttgg ttaccaaggg caatggcagc gcctacacct gtaagtgcat atttacattc
     3181 agccactatg gttaaagctg gtatcttttt attacttaga tttacacctt tgttaggtct
     3241 aagcaatatg tatatttata tcgtaacctt tgtcgggtta ataacaatgt tatttggttc
     3301 aatcacagct ttaaaacaat gggatttaaa aggaatccta gcatattcaa caatcagtca
     3361 actaggaatg attatggcaa tggtcggtat cggtggtgga tatgctcaac accaacaaaa
     3421 cgcaatagca tctatttatg tatttgtatt atttggtgcg ctatttcatc taatgaatca
     3481 tgccatcttt aaatgtgcgc ttttcatggg agtaggtatt ttagatcatg aagcaggttc
     3541 aagggatata cgaattttaa gtggaatgcg tcaactattt cctaaaatga atctagtcat
     3601 gacgatagcg gctctatcta tggctggagt accattttta aatggatttt taagtaaaga
     3661 aatgttctta gatgcattaa cacaaactgg acaattatcc caatttagtt tgatttcaat
     3721 gataagtatt gtgtttgttg gtgttattgc gagtgttttt acattcacat atgcattata
     3781 catggtaaaa gaagtatttt ggacaaaata tgattctaag gtttttacta aaaaaaatat
     3841 ccacgaacca tggttgttta gtttaccatc tcttatatta atggtgctag tacctgtaat
     3901 cttttttgta ccaaatatat ttgggaaggg gattatcgtt ccagcattaa gagctgtatc
     3961 aggtggtaat catcaaattg atcaattggc accacatgtt tcgcaatggc atggatttaa
     4021 cataccgctt cttttaacca tcatcattat tttattgggt agtgtactag caatcaaagt
     4081 agattggaaa aaagtgttca caggtaaaat tagacagatt tcagtttcaa aaagctatga
     4141 gatggtatat cgacattttg aaaagtttgc tacgaagcga tttaaacgtg ttatgcaaga
     4201 tcgtttaaac caatacatta ttatgacctt aggcatattt atgattatca ttggatatgg
     4261 ttatattcga attggacttc caaaagtaca tcagttacat gtttctgaat ttggggcatt
     4321 agaaattata ttagcaatcg taactgtcac aattggtatt tctttaattt ttatacgtca
     4381 acgactgaca atggtcattt taaatggagt catcggattt gttgtgacct tattctttat
     4441 agcaatgaaa gcccctgatt tagcattgac tcagctagta gttgaaacaa taacgacgat
     4501 actatttatt gttagttttt caagattacc aaacgtgcca agatctaacg ctaacaaaaa
     4561 aagagaaata attaaaattt ctgtatcact cttgatggca cttattgttg tatcattaat
     4621 ttttattaca caacaaacag atggtttatc atcaatatca gacttttatt taaaagctga
     4681 caaactaaca ggtggtaaaa atattgtaaa tgcgatactt ggtgacttta gagcattaga
     4741 tacattattt gaaggattag tgttaattat tactgggcta ggtatttaca cattattaaa
     4801 ttatcaagat cggaggggac aagatgaaag agaatgatgt cgtgttaaga acggtcacga
     4861 aacttgttgt atttatttta ttgactttcg gattctatgt cttcttcgca ggtcataata
     4921 atcctggtgg tggctttatt ggtggtttaa tatttagttc agcgtttatt ttaatgtttc
     4981 tggcttttaa tgttgaagag gttttagaaa gtttaccgat tgattttaga attttaatga
     5041 ttattggagc attggtatca tctattactg cgataatacc tatgtttttt ggaaaaccat
     5101 ttttgtctca atatgaaaca acttggttac ttccaatttt agggcaaatt catgtaagta
     5161 caataacact ttttgaatta ggtattttat tctcagttgt tggtgttatt gtcacagtga
     5221 tgttgtcgct tagcggaggt cgatcatgaa tttaatatta ttactagtta taggattttt
     5281 agtgtttata ggaacatata tgattttatc aatcaattta attcgtattg taattggaat
     5341 ttcaatatat actcatgctg gtaatctcat tattatgagt atgggaacgt atggttctag
     5401 tagatcagaa ccattaataa ctggtggaaa ccaattgttt gttgatccct tgttacaagc
     5461 tattgtacta actgcaatag ttatagggtt tgggatgact gcgtttttac ttgtacttgt
     5521 ttatagaact tataaagtaa caaaagaaga tgaaattgaa ggcctaaggg gggaagatga
     5581 tgctaagtaa cttattgatt ttaccaatgt tattaccatt cctttgtgcc ttaatccttg
     5641 tatttttaaa aaataatgat cgtatttcta aatatttata cttaggtaca atgactatca
     5701 ccacaattat ttcattaatg ttattaattt atgttcagcg tcaccgtcca attacgctag
     5761 actttggagg atggtcagcg ccctttggta tacagttttt aggagattct ttaagtttaa
     5821 ttatggttac aaccgcttca tttgtgatta ctttaattat ggcatacgga tttgggcgtg
     5881 gcgaacataa agcaaatcgt tatcacttgc catcgttcat attattttta agcgttggcg
     5941 tgataggctc ttttctaaca tcagatttat ttaatttata cgtcatgttt gaaattatgt
     6001 tacttgcgtc atttgtactc attacacttg gacaatctgt tgaacaatta cgtgccgcaa
     6061 ttatttatgt tgtcttgaat attattggtt catggctatt cttattaggt ataggtttac
     6121 tttataaaac agtaggtaca ttaaactttt cacatattgc aatgcgtttg aatgatatgg
     6181 gagataatcg cactgtaaca atgatttcat taatcttctt agtcgcattt agtgcgaaag
     6241 cagcgctggt tctttttatg tggctaccca aagcatacgc agtgttaaat actgagcttg
     6301 cagcattatt tgcagcgtta atgaccaaag taggggccta tgcattaatt cgattcttca
     6361 ctttactatt cgatcaacat aatgatctca tacatccatt gctagcaact atggctgcta
     6421 taactatggt catcggcgct ataggtgtca ttgcttataa agatattaaa aagattgcag
     6481 cttaccaagt cataatctca ataggattta tcattttagg tttgggaaca aacacgtttg
     6541 caggtattaa tggtgcaata ttttatttgg taaatgacat tgttgtaaaa acattgctat
     6601 tctttattat tggtagttta gtttacatta caggctatcg acaatatcaa tatttgaatg
     6661 gcttagctaa aaaagaacct ttatttggag ttgcgtttat tataatgatt tttgctattg
     6721 gcggcgtgcc cccatttagt ggctttccgg ggaaagtact tattttccaa ggcgcattgc
     6781 aaaatggcaa ttatattgga ctagcgttaa tgattattac tagtctaatt gcaatgtaca
     6841 gtttatttag gatacttttt tatatgtatt ttggagataa agatggggag gaagttaatt
     6901 ttaagaaaat cccactatat cgaaaaagaa ttttaagtat tttagtagtt gtggttatcg
     6961 caatcggaat tgctgcgcct gtagtgttaa atgttacaag tgatgcaact gagttgaaca
     7021 cgagtgatca attatatcaa aaacttgtaa atccgcattt gaaaggagag gactaaatga
     7081 atcaaatagt tttaaatatt atcattgcat tcttatgggt attatttcaa gatgaagatc
     7141 attttaaatt ctcgactttc ttttctggat atctaattgg tctaattgtc atttatatat
     7201 tacacaggtt tttcagcgat gatttttatg ttagaaaaat ttgggtagct attaaatttt
     7261 taggtgttta tttatatcaa ttaataacat ctagcattag cacgattaat tatattcttt
     7321 ttaaaacaaa agatatgaac cctggattac tttcatatga aacaagacta acaagtgact
     7381 gggcaataac atttttaaca attttaatta ttataactcc agggtctaca gtaatacgaa
     7441 tttctcaaga ctctaaaaag ttttttattc atagtatcga cgtgtcagaa aaagaaaaag
     7501 atagtttgtt aagaagtatt aagcattatg aagacttaat attggaggtg tcgcgatgat
     7561 acaaacaata acacatatta tgattattag ttcactcatt atttttggaa ttgcattaat
     7621 catctgttta tttagattaa tcaagggacc tacaacagca gatcgtgtcg ttacatttga
     7681 tacaacaagt gctgtcgtaa tgtcaattgt gggtgtgtta agtgtactta tgggcaccgt
     7741 ttctttctta gattcaatca tgctcattgc cattatatct tttgtaagtt ctgtttcaat
     7801 atcacgcttt attggtgggg ggcatgtgtt taatggaaat aacaaaagaa atctttagtc
     7861 ttattgctgc tgtgatgttg ttgttaggta gttttattgc tcttattagt gcaataggta
     7921 tcgtgaaatt ccaagatgtt ttcttaagaa gtcacgctgc gacaaaaagt tcaactttat
     7981 cagtgttatt aactttaatc ggtgtattaa tttattttat tgtgaataca ggatttttca
     8041 gtgtgcgttt attactgtca cttgttttta ttaatttaac ttcacccgtc ggcatgcact
     8101 tagtcgctcg cgctgcttat cgcaacggcg cttatatgta tcgaaaaaat gatgatcaca
     8161 cacatgcatc aatattatta agttcaaatg aacaaaactc tacagaagca ttacaattac
     8221 gtgctaaaaa acgagaagag catcgtaaga aatggtatca aaacgattga agtgttggct
     8281 aaattgttaa gcataacgat gcttttgaag atttgttttc aaaattaatc attaaaagag
     8341 tactttgaaa ttggttagtc gattttaagg tgctcatttt ttgtattata agttaatgtt
     8401 gttatgtgaa agcaagttgt ttatttatac aaacaattag tgataaaata aaattaaata
     8461 attgcaaatt taagtactgc aatcgtagac atatatctat attaaagtgc ttttgtggtc
     8521 gctaactcaa tttatcctct aaagtataat tacaacgaga tgtgatactt aattttcaat
     8581 taaacaatac tttttagaga ggtgaaagtt tggaaatatt tgaaacaatt cttatattta
     8641 tagctgttgt gatactaagt tcgtttgtcc atactttcat acctaaagta cccctagcat
     8701 ttatacaaat tttcttgggc atgttactat ttattacccc aatccctgtt caatttaatt
     8761 ttgattctga attgtttatg gtaacaatga ttgcgccttt gttatttgta gaaggtgtta
     8821 atgtttctag agtccattta agaaaatata ttaagccagt gatgatgatg gcattaggat
     8881 tagtcattac tactgtgata ggtgtaggtt tatttattca ttggatttgg ccagatttac
     8941 ctattggagc agcatttgca attgctgcca ttctttgccc tactgatgca gtagcagtgc
     9001 aagcaatcac taaaggaaag gtcttgccaa aaggagcaat gacaattctt gaaggtgagt
     9061 cattattgaa tgatgctgct ggtattattt catttaaaat agctgttgga gtattagtta
     9121 caggtgcttt ttcacttgtt gatgctgttc agttgttttt aattgcatca attggtggcg
     9181 cagtggttgg tttacttata ggtatggcat tagtaaggtt ccgattaaca ttgatgcgtc
     9241 gaggatatga aaacattaat atgtttacaa ttattcaatt gttaacacca tttgttacgt
     9301 atttaattgc tgaattgttt cacgcatcag gaatcattgc agcagtagtt gcaggacttg
     9361 tacatggttt cgaacgtgac agaattatgc aagtacgtac acaactacaa atgagttaca
     9421 atcatacatg gaatatacta ggttatgttt taaatggctt tgttttttca atattaggat
     9481 ttttagtacc tgaagttatt attaaaatta tcaaaacaga accgcacaat ttaatctttt
     9541 taataggcat cactattgtt gttgctttag ctgtctatct atttagattt gtttgggttt
     9601 atgtcttata tccttatttt tatttagcca tcagtccatt ccaaaaaatg atgactaaaa
     9661 atgatgatga taatccaacg actgagaaac caccaaagcg aagtttatac gctttaatta
     9721 tgacgttatg tggtgtgcat ggaacaattt ctttagcaat cgcattaacg ttaccgtatt
     9781 ttttagcagg gcatcatgct tttacgtata gaaacgactt attatttatt gcatctggta
     9841 tggttattat tagtttggta gttgcgcaag tattattgcc actattaacg aaacctgcac
     9901 ctaaaacagt aattggcaat atgtcgttta aagttgctag aatttatata ttagaacaag
     9961 ttattgatta tctaaatcaa aaatctactt tcgaaacaag ttttaaatat ggtaa
//
LOCUS       DAKPJH010000094         9996 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.094, whole genome shotgun sequence.
ACCESSION   DAKPJH010000094 DAKPJH010000000
VERSION     DAKPJH010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9996
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.094"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..515)
                     /locus_tag="OY092_002058"
     CDS             complement(<1..515)
                     /locus_tag="OY092_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HCX1076985.1"
                     /translation="MLKLNPYKIGFRTIKTAVGMTLGVIISKLLGLDNYASSAILVVL
                     CIKHTKVHSLQAIISRLVSCFLVLFLGSAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQ
                     EGVITSCVILLHVFNAKSIDVHLIVNETLLLLIGLSIAFTMNLMMPSLDKQLDEYKCK
                     IEQQIADIFSK"
     gene            complement(529..966)
                     /locus_tag="OY092_002059"
     CDS             complement(529..966)
                     /locus_tag="OY092_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HCX1076986.1"
                     /translation="MDMNFDLYMNGVVEQARNEIESAGYEQLTTAEDVDKVLKQDGTT
                     LVMINSVCGCAGGIARPAASHALHYDVLPDRLVTVFAGQDKEATQRAREYFEGYAPSS
                     PSFALVKDGKITEMIERHQIEGHDVMNVINQLQTLFNKYCEER"
     gene            complement(1317..2591)
                     /locus_tag="OY092_002060"
     CDS             complement(1317..2591)
                     /locus_tag="OY092_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HCX1076987.1"
                     /translation="MEITMPKLGESVHEGTIEQWLVSVGDHIDEYEPLCEVITDKVTA
                     EVPSTISGTITEILVEAGQTVAIDTIICKIETADEKTNETTEEIQANVDEHTQKSTKK
                     ASATVEQTSTAKQNQPRNNGRFSPVVFKLASEHDIDLSQVVGSGFEGRVTKKDIMSVI
                     ENGGTTAQSDKQVQTQSTSVDTSSNQSSEDNSENSTIPVNGVRKAIAQNMVNSVTEIP
                     HAWMMIEVDATNLVNTRNHYKNSFKNKEGYNLTFFAFFVKAVADALKAYPLLNSSWQG
                     NEIVLHKDINISIAVADENKLYVPVIKHADEKSIKGIAREINTLATKARNKQLTAEDM
                     QGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVINDMIAIRNMVNLCISI
                     DHRILDGLQTGKFMNHIKQRIEQYTLENTNIY"
     gene            complement(2604..3587)
                     /locus_tag="OY092_002061"
     CDS             complement(2604..3587)
                     /locus_tag="OY092_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HCX1076988.1"
                     /translation="MAKLSYLEAIRQAQDLALQQNKDVFILGEDVGRKGGVFGTTQGL
                     QQKYGEDRVIDTPLAESNIVGTAIGAAMVGKRPIAEIQFADFILPATNQIISEAAKMR
                     YRSNNDWQCPLTIRAPFGGGVHGGLYHSQSIESIFASSPGLTIVIPSTPYDAKGLLLS
                     SIESNDPVLYFEHKKAYRFLKEEVPEEYYTVPLGKADVKREGEDLTVFCYGLMVNYCL
                     QAADILAADGINVEVVDLRTVYPLDKETIIDRAKHTGKVLLVTEDNLEGSIMSEVSAI
                     IAEHCLFDLDAPIMRLAAPDVPSMPFSPVLENEIMMNPEKILNKMRELAEF"
     gene            complement(3587..4579)
                     /locus_tag="OY092_002062"
     CDS             complement(3587..4579)
                     /locus_tag="OY092_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HCX1076989.1"
                     /translation="MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVV
                     SGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGK
                     QMPSHFSSRAKNILSQSSPVATQIPHAVGAALAIKMDGKKKIATATVGEGSSNQGDFH
                     EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLA
                     MYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFK
                     KELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAYAFVYEEGSLN"
     gene            complement(4595..6016)
                     /gene="lpdA"
                     /locus_tag="OY092_002063"
     CDS             complement(4595..6016)
                     /gene="lpdA"
                     /locus_tag="OY092_002063"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HCX1076990.1"
                     /translation="MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVERQLLGGTCL
                     HKGCIPTKSLLKSAEVFQTVKQAAMFGVDVKDANVNFENMLARKEDIINQMYQGVKHL
                     MQHNHIDIYNGTGRILGTSIFSPQSGTISVEYEDGESDLLPNQFVLIATGSSPAELPF
                     LSFDHDKILSSDDILSLKTLPSSIGIIGGGVIGMEFASLMIDLGVDVTVIEAGERILP
                     TESKQASQLLKKSLSARGVKFYEGIKLSENDINVNEDGVTFEISSDIIKVDKVLLSIG
                     RKPNTSDIGLNNTKIKLSISGHILTNEFQQTEDKHIYAAGDCIGKLQLAHVGSKEGVV
                     AVDHMFEGNPIPVNYNMMPKCIYSQPEIASIGLNIEQAKAEGMKVKSFKVPFKAIGKA
                     VIDSHDANEGYSEMVIDQSTEEIVGINMIGPHVTELINEASLLQFMNGSALELGLTTH
                     AHPSISEVLMELGLKAESRAIHV"
     gene            complement(6167..7846)
                     /gene="recN"
                     /locus_tag="OY092_002064"
     CDS             complement(6167..7846)
                     /gene="recN"
                     /locus_tag="OY092_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HCX1076991.1"
                     /translation="MLQTLSIKQFAIIEELEIQFSDGLTVLSGETGSGKSIIIDAIGQ
                     LIGMRASSDFVRHGEKKAVIEGIFDIDESKDAIHILKNMDIDVDEDFLLVKREIFSSG
                     KSLCKINNQTVTLQDLRKVMQELLDIHGQHETQSLLKQKYHLTLLDNYAESRYQDLLD
                     KYHQTFQNYKAKKQELEDLESADQALLQRLDLMKFQLEELSEAHLKEGEIEQLEIDIK
                     RIQNSEKLSLALNNAHMTLTDENAITDRLYELSNHLLTINDIVPNKYDKLKEDIDQFY
                     YILEDAKHELYDEMANTEFDEQVLNEYESRMNLLNNLKRKYGKDISELISYQEKLNNE
                     INKIENYEQSTSQLREEINALYNQVIEVGQALSKQRRIVARELRDHIVSEIQNLQMKD
                     ANLEISFKKLEEPNIDGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVK
                     SRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAEYIQVICISHLPQVASMSDHHLLISK
                     SSKDDRTTTQVQELIGDDKVDEIARMISGASVTDLTRENAREMIQHNQRRR"
     gene            complement(7862..8314)
                     /gene="argR"
                     /locus_tag="OY092_002065"
     CDS             complement(7862..8314)
                     /gene="argR"
                     /locus_tag="OY092_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HCX1076992.1"
                     /translation="MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSR
                     DIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPG
                     NAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL"
     gene            complement(8745..9626)
                     /locus_tag="OY092_002066"
     CDS             complement(8745..9626)
                     /locus_tag="OY092_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HCX1076993.1"
                     /translation="MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKR
                     IRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKV
                     YGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQS
                     EGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKD
                     DLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVYELTQIDEQF
                     NTKHLLEIVDLFYSRDH"
     gene            complement(9604..9834)
                     /locus_tag="OY092_002067"
     CDS             complement(9604..9834)
                     /locus_tag="OY092_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HCX1076994.1"
                     /translation="MTKETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSA
                     ACDTTLKNAEKKVNDLIKEEAEDVKNDESTDE"
     gene            complement(9827..>9996)
                     /locus_tag="OY092_002068"
     CDS             complement(9827..>9996)
                     /locus_tag="OY092_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HCX1076995.1"
                     /translation="NLSPTNTMLRGYAIVNKKDEVITSTKDLTENDQLTLTMKDGLVD
                     AKVTKVRCNND"
BASE COUNT         3013 a         1923 c         1354 g         3706 t
ORIGIN      
        1 tatttactaa aaatatcagc aatttgttgc tcaattttac atttgtattc gtctagttgt
       61 ttgtctaaac ttggcatcat taaattcatt gtaaatgcaa tgcttagtcc aattaacagt
      121 aataatgttt cattaacaat taaatgtaca tcaattgatt ttgcattaaa aacatgaagt
      181 aatataacgc aactcgtaat gacaccttct tgtactttta atacgacagt taatggtata
      241 aataacaata cgataatacc gagtacaatt ggactctggc ctaataaact aaatattgct
      301 gaacctaaaa acaatactaa aaaacatgat actaatcttg aaataatcgc ttgtagcgaa
      361 tgtacttttg tatgtttaat acataatacg actaatatgg cgcttgaagc ataattatct
      421 aaacctaaca gcttactaat aattacacct aaagtcatac ccactgctgt ttttattgtt
      481 ctaaatccaa tcttgtaagg atttaacttt aacatgggtt agcgcctctt atctttcttc
      541 acaatattta ttgaataatg tttgtaattg attaattacg ttcatcacat catgaccttc
      601 gatttgatgt ctttcaatca tttctgtaat ctttccatct tttactaatg caaatgacgg
      661 acttgaaggc gcataacctt cgaagtattc acgcgctctt tgtgtcgctt ctttatcttg
      721 tccagcaaat actgtcacta gacgatcagg taatacgtca taatgtaaag catgtgatgc
      781 tgctggtctt gcgataccac ctgcacatcc acatacagaa ttgatcataa ctagtgttgt
      841 accatcttgt ttaagaactt tgtcaacatc ttctgcagta gttaattgct catatcccgc
      901 agattcaatt tcattccttg cttgttctac aacaccgttc atgtataaat cgaaattcat
      961 gtccataagt tcaatcacct atccctttat atttaaacta tcctcattct actaattaat
     1021 aacatattgt tcaataaact aatctgaatc acacctatat ttagacacaa ttttaacaat
     1081 ataccaaaca ttattgtgct taaaatcatg gaaactaatt tgttcacctg ttttcattaa
     1141 tatgtttcaa gtatgatgtc ttattttgac tttactgcaa aaattcattc aaccatgttg
     1201 attattgttc tttatctttt tttgaatata ttgcacatat tttattgccc aaaaaaatac
     1261 atccatcgac aagaacaaga taaaacaagt tgtcgataga tgcatctatg ttatcactaa
     1321 tatatatttg tattttctaa agtatactgt tcgatacgct gtttaatatg attcataaat
     1381 ttacctgttt gtaaaccatc taaaatacga tgatcaattg aaatacataa attaaccatg
     1441 ttacgaattg caatcatatc attaattact actggctttt taacgattga ttctacttgt
     1501 aaaatcgctg cttgagggtg atttataata cccattgatg atacagaacc aaacgtacca
     1561 gtattattta ccgtaaatgt accgccctgc atatcttcag ctgtcaattg cttattacgc
     1621 gcttttgttg ctaaagtatt aatttctcta gctatacctt tgattgactt ttcgtctgca
     1681 tgcttaatca caggtacgta taatttattt tcatcagcaa cagcaattga aatattaatg
     1741 tctttatgta agacaatttc atttccttgc cagctactat ttaataaagg atatgctttt
     1801 aaagcatctg ctacagcttt tacaaagaaa gcaaaaaacg ttagattata tccttcttta
     1861 tttttaaagc tgtttttata atgatttctc gtattcacaa gatttgtagc atctacttca
     1921 atcatcatcc atgcatgtgg aatctctgtt acactattaa ccatattttg cgcaattgct
     1981 ttacgcacac catttactgg tattgtgctg ttttcactat tgtcttcaga tgattggtta
     2041 cttgatgtat ctactgatgt tgattgtgtt tgaacttgtt tgtcagattg agctgtggta
     2101 ccaccatttt caataactga cattatatcc ttcttagtta cacgaccttc aaatccacta
     2161 cctacaactt gtgataaatc aatgtcatgc tctgaagcga gtttaaatac aacaggtgaa
     2221 aagcgaccat tattacgtgg ttgattttgt ttagcagtag atgtctgttc cactgttgca
     2281 ctagcttttt tagtagattt ctgagtatgc tcatccacat ttgcttgtat ctcttcagtt
     2341 gtttcatttg tcttttcatc agcagtttca attttacaga taattgtatc aatagctact
     2401 gtctgccccg cttcaactaa aatttctgta attgttcctg atatcgtgga agggacttca
     2461 gctgtcactt tatctgtaat aacttcacat aatggttcat attcatcaat atgatcacca
     2521 acagaaacta accattgttc aatggtgcct tcatgaacac tctcacctaa cttaggcatt
     2581 gttatttcca tgactttccc tccctagaat tctgctaatt cacgcatttt atttaagatt
     2641 ttttctggat tcatcataat ttcattttct aatacaggag aaaatggcat agatggtaca
     2701 tctggagcag ctaaacgcat gattggtgca tctaaatcga acaagcaatg ctctgcaata
     2761 atcgctgaca cttctgacat aatgctacct tctaaattat cttcagttac aagtaaaact
     2821 ttacctgtat gtttagcacg atcaataatt gtttctttat ctaatggata aacagttcgt
     2881 aaatctacga cttcaacatt gataccgtct gcagctaaaa tatcagcggc ttgtaagcaa
     2941 taattgacca ttaatccata acaaaatact gttaaatctt caccttcacg tttaacatct
     3001 gcttttccta aaggtacagt gtaatattct tctggcactt cttcctttaa gaaacgataa
     3061 gcttttttat gctcaaagta taaaacagga tcatttgatt caattgaaga taataataga
     3121 cctttagcat catacggtgt ggaaggaata acaattgtta aacctggtga tgaagcaaat
     3181 atactttcaa tactttgtga atgatatagt cctccgtgaa caccgccacc aaatggtgca
     3241 cgaatcgtta atgggcattg ccaatcatta tttgaacgat aacgcatttt cgcagcttca
     3301 ctaataattt gatttgtcgc aggtaaaata aaatctgcaa attgaatttc tgcaattggt
     3361 cttttaccta ccatagctgc accaatggca gttccaacaa tatttgactc agctaatggc
     3421 gtatcgataa ctctgtcttc accatatttt tgttgcagtc cttgagtagt accaaatacg
     3481 ccaccttttc taccaacatc ttcaccaaga ataaacacat ctttattttg ttgtaatgct
     3541 aagtcttgtg cctggcgtat cgcctctaaa taagataatt tagccattag ttaagactcc
     3601 cttcttcgta cacaaatgca taggcttctt cgacacttgg atatggcgcg tcttcagcag
     3661 cctttgtcgc tttattgatg atgtctttat gctccgcttc tatttctgcc aaccaagcat
     3721 catcgataat gccagctgaa agcaactctt ttttgaactt ttcattgcag tctgcttttt
     3781 taagcgcttc acgctcttct ttcgtacgat attggtcgtc atcatctgat gaatgagctg
     3841 tcatacgact tgttactgct tcaatcaaag ttgaaccttg accagaaata gctcgatctc
     3901 ttgcttcttt catcgcttta tacattgcta atggatcatt accatctact tgttcaccat
     3961 gtataccgta accaagtgct ctatccgata atttttcagc tgcgtattgt aatgaatcag
     4021 gtactgaaat tgcatattta ttatttataa tgacacatac aaaaggaagt ttgtgtacac
     4081 ccgcgaagtt taaaccttca tggaagtcac cttggtttga gctaccttca ccaacagttg
     4141 ctgttgcaat tttcttctta ccatccattt ttatagctaa agcagcacca acagcatggg
     4201 gtatttgagt tgctaccggt gaactttgtg acaaaatatt cttagctcta ctactaaagt
     4261 gtgatggcat ttgttttcca ccagagttaa catcgtcttt ctttccaaac gctgataaaa
     4321 acgtatcata cgctgatata cccatataag taacgaaagc tagatctcta taataaggcg
     4381 cagtaatatc accttcttct aatgcgtatg ccatcccaat ctgagttgct tcttgtcctt
     4441 gaccacttac aacaaatgga attttacctg cacggttcaa taaccacagt ctttcatcta
     4501 tttttctacc taaatccatc catttatata ttacttttag gtcttcttcg ctaaggccta
     4561 atgatttata atcaatcatg ttaaatcctc ctatttatac gtgaatagct ctactttctg
     4621 ctttcaatcc taattccatc aacacttcag agatggaagg atgtgcgtgt gttgttagtc
     4681 ctaattctaa tgccgagcca ttcatgaact gtaacagtga tgcctcatta atcaattctg
     4741 ttacatgtgg accaatcata ttaataccca caatttcttc agttgattga tcaatcacca
     4801 tttcgctata cccttcgttt gcatcatggc tatcaatcac tgctttacca attgctttaa
     4861 atggtacttt aaaactttta actttcattc cctctgcctt tgcttgctca atgtttaaac
     4921 cgatagaagc aatttcaggt tgtgaataaa tacacttagg catcatgtta tagtttactg
     4981 ggattgggtt cccttcaaac atatgatcga cggccacaac accttctttt gatccaacat
     5041 gtgccaattg taattttcca atacaatcac cagctgcata aatatgttta tcttcagttt
     5101 gttgaaattc gttcgttaaa atatgtcctg atattgaaag ttttatttta gtgttgttta
     5161 aaccaatatc tgatgtgtta ggttttctac caatcgatag caacacttta tctactttaa
     5221 ttatgtctga ggaaatttca aatgtaacac catcttcgtt aacatttata tcattttcag
     5281 aaagttttat tccctcatag aatttaacac cacgtgctga taatgatttt tttaatagtt
     5341 gtgaagcttg tttactttca gttggtaaaa ttctttcacc tgcttctata actgttacgt
     5401 caacacctaa atctatcatc aatgatgcaa attccattcc gataacacca ccaccaataa
     5461 taccaatact tgatggtaac gtctttaatg ataatatatc atcgctagat aaaattttat
     5521 catgatcaaa tgataaaaat ggcaactctg caggcgaaga accagttgca attaatacaa
     5581 attggttggg taataagtct gattcaccat cttcatattc gacagaaatt gtgccacttt
     5641 gaggtgaaaa tatagatgta cctagaatac gtcccgtgcc attataaatg tcaatgtgat
     5701 tgtgttgcat taaatgcttt acaccttgat acatttgatt aataatgtct tcttttcgtg
     5761 ccaacatatt ttcaaaatta acattagcat ctttgacatc aacgccaaac attgctgcct
     5821 gttttactgt ttgaaatact tctgctgact taagcagtga tttagtagga atacaacctt
     5881 tatggagaca agtacctcct aatagttgtc gttctactat tgccactttc ttacctaatt
     5941 gagacgcacg tatcgcagca acatatcctg cagtacctcc accgagaacg actaaatcat
     6001 attgtttctc tgacatgttc ttactcctaa ctaatgatat atatccattg aaaatttatt
     6061 aatacatagt tttcatgtcc attaattacc tattttacat gattgtctat ttagtttgaa
     6121 tgcacataaa taagtccaca aatgagtatt caacacactt tggaaattat ctacgtcttt
     6181 gattgtgttg tatcatttct cttgcatttt ctcgagttaa atcagtaaca cttgcacctg
     6241 aaatcattcg tgcaatttca tctactttat catcgccaat taactcttga acttgtgttg
     6301 ttgtacgatc atcttttgat gatttcgaaa ttaataaatg atggtcgctc atcgatgcaa
     6361 cttgtggcaa gtgagaaata caaataactt gtatatattc tgctatatct cgcattttct
     6421 ctgccatttt ttgtgcagct tgtccagata cacctgagtc aacctcatcg aataaaattg
     6481 cagtttgacc tctcgattta acaaaaatac tttttaacgc taacataatt ctagaaagtt
     6541 ctccacctga cgcaatttta tttaaacttt ttaatggttc ccctttatta ggactgatta
     6601 aaaattctac aaattcgatt ccatcaatat tcggttcttc taatttttta aatgaaatct
     6661 caagatttgc atctttcatt tgtaagtttt gaatttccga tacaatgtgg tctcttaact
     6721 ccctagcgac tatacgacgc tgctttgata gcgcttgtcc aacctctata acttgattat
     6781 acaatgcatt tatttcttct cgtaactgcg atgtactttg ttcatagttt tcaattttat
     6841 tgatttcatt attaagtttt tcttgatatg agattaattc tgaaatatct tttccatatt
     6901 tgcgttttaa attattcagc aaattcatac gagattcata ctcgtttaac acttgttcgt
     6961 cgaattctgt attagccatt tcatcatata actcatgttt tgcatcttct aaaatgtaat
     7021 aaaattgatc aatatcttct tttaatttgt catatttgtt tggaactata tcgtttattg
     7081 ttaacaaatg gttgcttagt tcatacaaac gatcagtgat agcattttca tccgttaatg
     7141 tcatatgtgc gttattaagt gctaagctta atttttcaga gttttgaatg cgtttaatat
     7201 caatttcaag ttgctctatt tcaccttctt ttaggtgtgc ttcagacaat tcttctaatt
     7261 gaaatttcat taaatctaaa cgctgcagca atgcttggtc tgctgattct aaatcttcta
     7321 actcttgctt tttggcttta taattttgaa aagtttggtg atatttatcc aacaaatctt
     7381 gataacgtga ttctgcgtaa ttatccaata atgttaaatg gtatttttgt ttcaacaaag
     7441 actgcgtttc atgttggcca tgaatatcta ataattcttg cataactttt cgtaaatctt
     7501 gtaaagtaac tgtttgatta ttaattttac aaagactttt accagagcta aaaatttccc
     7561 gtttaactaa taaaaaatct tcatctacat caatatccat atttttcaat atatgtatag
     7621 catctttact ctcgtcaata tcaaatatac cttcgatgac agcctttttt tcaccatgtc
     7681 ttacaaaatc agatgaagct ctcattccaa ttaattgtcc aattgcatct ataataattg
     7741 acttacctga acccgtttca ccacttaaaa cagttaaacc atcagaaaat tgaatttcta
     7801 actcttcaat aatagcaaat tgcttgattg ataaggtttg taacataaac tcatcgcatc
     7861 cttataacaa attgaaaatt cttgacttga tttcatcact tgcctctttg cttcgacaaa
     7921 taattaaaca agtatcatca ccacaaattg tgcctagtac ttcttcccaa ttgatttggt
     7981 ctaatatagc tccaatagat tgtgcattac caggtaatgt ttttagaaca agtaaattat
     8041 cagtaccatc tatattaaca aaggaatcca ttaaataacg tcccaatttt tctaaaggat
     8101 ggaattttct atcatttggt aaactataaa catattgacc tgaaggtata ggtactttaa
     8161 taagttgtag ttctttaata tcacgagaaa cagttgcttg agtgacattt aaatcataat
     8221 cgtttaatcg tttaactaat tcatcttgtg tctctatctg ttcatttgaa ataatttctc
     8281 taatttttat atgcctaacc gattttttgg gcacagtaaa cacctctgat tacgaatatt
     8341 tatacattta ttttaacaca tgcactgatt tacgactact aaacaccttt acgtaaaaag
     8401 ggtaaacatg gtttatctat cttggttatc tatttataaa tatttttcat attacgcata
     8461 acaattgctt aaaatatgta taaaaatgaa tatatgtgta ataaacttgc taattattag
     8521 atttaataag cgtcaattgt ttgaacatat ttaattaaaa tcacattgat atcacagatg
     8581 cgaatattgt cgtatagaaa ttgaaaattc tatttttaaa tgaaagactt caacataatt
     8641 ttaagtttca acatgagaaa aatcgattaa caaacaacgt cagttgaata tgccttttga
     8701 gacatttcaa actttacaat tgttgctaat cgatatattt gcttttagtg atccctgcta
     8761 taaaataaat caacgatttc taataagtgt tttgtattga attgttcatc aatttgcgtt
     8821 agttcataca ctgctgcgtc tctatgataa gtcaatttat cttctgcgcc atcttttcct
     8881 aataaactca cgtacgtact tttattattt tcaagatcgc tgcccacttt tttacctaac
     8941 ttcgcttcat caccatagca gtctaataaa tcatctttaa tctgaaacat catacctaaa
     9001 tgataactat aactttctaa atgttcttta gttgcatcat cgacattagc gatatctgct
     9061 gcactcataa ccgcaaaagt taatagtgca cctgtttttg ttttgtgtat catttccaaa
     9121 gtttcaagat caattggttg gccttcgctt tgcatatcta acatttgtcc accgaccatt
     9181 ccaacatgac cacttgctat tgacagccgt tgtagaactt ttatttttac ttcatcagtt
     9241 aatctatcat cacttgaaat aagttcaaat gctttagtta ataaagcatc acctgctaat
     9301 atcgcagtcc actcaccata tactttatga tttgttaatt tccctcgtcg ataatcatca
     9361 ttatccatcg ctggtaggtc atcatgaata agtgaatatg tatgaatcat ttctagtgca
     9421 attgcgctct tcatacctaa ctcatactcg gtatttagtg aatctaaagt gagtaataac
     9481 agaactggtc ggatgcgttt acctccagca tttaatgaat acaacatact ttcttctagc
     9541 tgagtatcca ttactgattt atttatcgca accgataatt cattattgac ttcatctatt
     9601 aatttattca tcggtagatt cgtcattttt tacatcctca gcttcttctt ttattaagtc
     9661 attcaccttt ttttcggcat tttttaaagt tgtgtcacaa gctgctgata gtttcatacc
     9721 acgttggtat aaatctaatg attcctctaa agatactgtt tcattatcta atttttgaac
     9781 aatttgctct aattcttgca tcatttcttc aaaactttgc gtttctttag tcattattac
     9841 accttacttt cgtaactttt gcatctacta agccatcttt cattgttaac gtcaattgat
     9901 cattttctgt taaatcttta gtactcgtaa tgacttcgtc ttttttatta acaattgcat
     9961 atccacgcaa cattgtatta gttggactta aattgt
//
LOCUS       DAKPJH010000095         9810 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.095, whole genome shotgun sequence.
ACCESSION   DAKPJH010000095 DAKPJH010000000
VERSION     DAKPJH010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9810
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.095"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            2..949
                     /locus_tag="OY092_002069"
     CDS             2..949
                     /locus_tag="OY092_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000830946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HCX1076996.1"
                     /translation="MKRSSKSKMSLPKKIFLWVFGILVILAIVVVVYVAAKIFITGNK
                     IHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDSDADRKKKGGGERSDSIMILSINPK
                     TKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATIDM
                     DGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFG
                     RQQRQQIVLEAMANKIASPSSITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDT
                     INKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE"
     gene            1552..4506
                     /gene="fdhF"
                     /locus_tag="OY092_002070"
     CDS             1552..4506
                     /gene="fdhF"
                     /locus_tag="OY092_002070"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HCX1076997.1"
                     /translation="MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGP
                     IQTCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVC
                     DYNNGDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDI
                     EVNETIRIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYMT
                     DTEPGSLAAMIDLTKKAEPGYGPLFAISDSEAEMRKERIKKTKTVCTYCGVGCSFEVW
                     TKDREILKVQPSHDSPANKIATCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWDEA
                     LNVIADNFTSIKEKYGPDALSFISSSKATNEESYLMQKLARQVIGTNNVDNCSRYCQA
                     PATKGLFRTVGHGGDSGSIEDLEKAAMSVLIGTNTAEAHPVIASRMKRAQKLFGQKIH
                     VFDIRKHEMAERADRFYQPKPGTDLAWLSAVTKYIIDHDLHDKAFIEEWVEDFDEYYK
                     SLETFTMAFAEEATGIPEAELIKFAEECAKAESVVICWAMGITQQDIGSDSSTAISNL
                     LLVTGNYRRPGTGAYPLRGHNNVQGCSDMGSMPDKITGYQSIEADDIRAKFEKEYGVK
                     LNPKVGKDNHEMVEGVHDGDIHSLYLYGEDTGIVDSNINFVQAAFEKLDFMVVQDEFL
                     TFTATFADVVLPASPSLEKDGTFTNTERRIQRLYQALKPLGDSKPDWKIFQAIANKLG
                     FDWNYKHPSEIMDEIARLTPLYAGVSYDRLEGFNSLQWPVHPDGTDEPILYLEGFNFD
                     NGKAKLFPLSFDNYFKQDEVYDIHVNNGRLLEHFHEGNMTYQTPMLKYKVPRAFVEIS
                     PELAEDRGIHEGAEVKLISETGEAVLQVHVTDRVKGKEIYIPLNNDAMENGDLGAINL
                     LTNSDVDQYTDTPSYKRTSCRLEVITKRGKSPLNPNNFRVNKKRHPQYSVQVQKKWER
                     PDYVFPGNQVDK"
     gene            4506..4979
                     /locus_tag="OY092_002071"
     CDS             4506..4979
                     /locus_tag="OY092_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HCX1076998.1"
                     /translation="MAERISSKIRRLEKSEEQIKLESLNEVTEAIAANKDSILKAIKL
                     IKVLDDAKILDALNGAVRGRQVIINKFAVELNKDIYTGLLTNMASMVFLLGELNVSDL
                     SDFLNKVNKGLHVANQASPNAKTSVRSLLGVLKDDDMNRSLTYMLNMLKGMSRED"
     gene            5206..5439
                     /locus_tag="OY092_002072"
     CDS             5206..5439
                     /locus_tag="OY092_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1076999.1"
                     /translation="MLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFN
                     MMFRDRTTMKVIVNASFLIVILAIVVAYFLLSK"
     gene            5461..6237
                     /locus_tag="OY092_002073"
     CDS             5461..6237
                     /locus_tag="OY092_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000739218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HCX1077000.1"
                     /translation="MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEA
                     VSMQQGKGIVQTKEEDGKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQ
                     LLKGKGILENRGKVFLEAQEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNF
                     FGIGAFDSSAVRSGKSYAEKEQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPEN
                     PAQHQYASDIRWADKIAQLMDKCYKQFGIKKDDIRQIYYK"
     gene            6548..7672
                     /locus_tag="OY092_002074"
     CDS             6548..7672
                     /locus_tag="OY092_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HCX1077001.1"
                     /translation="MKIAIIGAGIGGLTAAALLQEQGHTIKVFEKNESVKEIGAGIGI
                     GDNVLKKLGNHDLAKGIKNAGQILSTMTVLDDKDRLLTTVKLKSNTLNVTLPRQTLID
                     IIKSYVKDDTIFTNHEVTHIDNETDKVTIHFAEQESEAFDLCIGADGIHSKVRQSVNA
                     DSKVLYQGYTCFRGLIDDIDLKHPDCAKEYWGRKGRVGIVPLLNNQAYWFITINSKEN
                     NHKYSSFGKPHLQAYFNHYPNEVREILDKQSETGILLHNIYDLKPLKSFVYGRTILLG
                     DAAHATTPNMGQGAGQAMEDAIVLVNCFNAYDFEKALQRYDKIRVKHTAKVIKRSRKI
                     GKIAQYRSRLVVAVRNRIMKMMPNALAAGQTKFLYKSKEK"
     gene            complement(7764..8717)
                     /locus_tag="OY092_002075"
     CDS             complement(7764..8717)
                     /locus_tag="OY092_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HCX1077002.1"
                     /translation="MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKD
                     ATALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNA
                     TADLTIGLVLAVARRIVEGDQLSRITGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAV
                     ARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLID
                     TEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLN
                     NVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN"
     gene            complement(9080..9580)
                     /locus_tag="OY092_002076"
     CDS             complement(9080..9580)
                     /locus_tag="OY092_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077003.1"
                     /translation="MKKLVTATTLTAGIGTALVGHAQHADAAENYTNYNNYNYNTTQT
                     TTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTV
                     NHTPSKGAILQSSEGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGN
                     YNYIHI"
BASE COUNT         3478 a         1375 c         1882 g         3075 t
ORIGIN      
        1 attgaaacgt tcgtctaaaa gtaaaatgag cctaccgaaa aaaatatttt tatgggtatt
       61 cggtatttta gtaatcttag cgattgtagt tgttgtgtat gtagctgcta aaatttttat
      121 tactggtaat aagatacaca atccgttaga tcgcaatcat tcagaattaa gagataaaaa
      181 agtgagttta aacgatggtg atccattcac aatcgcttta tttggtgtcg attcagatgc
      241 tgatcgtaag aaaaagggtg gcggagagcg tagtgatagt attatgattt tatctatcaa
      301 ccctaaaacg aagaaaactg aaatagtaag tataccgcga gatacaagag cagaaattgt
      361 tggccgtggt actactgaaa aaattgcaca tgcctatgca tatggtggac caaatatggc
      421 tgttaaatca cttgaaaaat taatgaatgt gccaattgat cattatgcga caatcgatat
      481 ggatggtttg cataatatga tagatagcat cggcggtgtt gatgtagtaa gtaatgatac
      541 attcactgtt gatggtgttc gttttacaaa aggacagcag acacatgtaa atggtgatca
      601 agcattgaag tttattagaa gtcgtaaaga agaaggtgct ggtggtgact ttggtcgaca
      661 acaacgtcag caaattgtgc ttgaagcgat ggccaataag attgcaagcc catcatcgat
      721 tacacatttt aatagtctaa tgaatgaaat tcaaaataat gttaaaacag atttaacatt
      781 aggtgatttg aatacgatta gaagcaatta taaagatgct aatgacacga ttaataaaca
      841 tcaattgagt ggtcaaggcg gcattcaaag tgacggattg tactacttca ttcctagtga
      901 gcagtcaaaa gctgaaagta ctaagttatt aaaagataat ctagagtagt aaactaaggg
      961 aaagtaagtt atcaaaattg tacacaaact aattagatag aatgagctgt aaaaagaata
     1021 acgaatagaa ttaatagccc gtaaatagaa ggtgataaca ctttttattt atgggttatt
     1081 ttatttaatg cctgatatgc ggttttgtaa attaacccat tacaaattca atttaaaaat
     1141 aaatcatacc ttctaaatga cagtagatat ttatcagact tgggttatta attttcagaa
     1201 aaagggtatt tataaatagt ataacgattt ttaggtgagc tacttattaa gtattgtcat
     1261 taataaggtt gtgaaagata tggcaaaaaa gcgtgaaaca gataattgga aagctaataa
     1321 tgataattat tttcaattaa acaaaaagat gatttaattt cgcgcaaaat atttcaaata
     1381 aaaatgattg caaaaataaa aaatacaaaa atacgcttaa cattatacac ttaaagtaat
     1441 acaattatat tgattctatc tgaaagatgt gtggggcatc gttattttag gtggatatga
     1501 gcaatttatt aaaagtcatt tacggaaaaa tatatagatg gggtgaatag tatgcaagaa
     1561 catttggtgg tcacgcttga tggtaaagat tatcttgtag aaccaggtac aaatttactt
     1621 gaattcatta aatcgcaaga tacttttgtg ccttcaattt gttataacga atcaatggga
     1681 ccaattcaaa cgtgtgatac atgtactgtt gagattgatg gtaaaattga acgttcatgt
     1741 agtacagtga ttgatcgtcc aatgacagta aatacagtga ataatgatgt gaaagatgct
     1801 caaaaagaag cgcttgatcg aattttagaa aagcatatgc tgtattgtac agtatgtgat
     1861 tataataatg gtgattgtga aattcataat acgatggatg catgggggct tcagcatcaa
     1921 acgtatgaat ataaagagaa gccatacgaa aaagattacg gcccatttta tcgttatgat
     1981 ccaaatcaat gtatcttatg tgggcgttgt gtagaagcat gtcaagatat tgaagtaaat
     2041 gaaactatta gaattgattg ggatcgtgaa catccacgtg ttatttggga taatgatgta
     2101 ccgattaatg aatcttcatg tgtatcttgt ggtcaatgcg caactgtatg tccatgtaat
     2161 gccatgatgg aagtgaatat ggaaggtaat gcgggttata tgactgatac ggaacctggt
     2221 tcattagcgg caatgattga tttaactaaa aaagcagaac ctggttatgg tccactattt
     2281 gcaatctcag attcagaagc agaaatgcgt aaagagcgta ttaagaaaac taaaacagtg
     2341 tgtacatatt gtggtgtggg ctgttcattt gaagtttgga ctaaagatag agaaatttta
     2401 aaagtacaac catcacatga ttctccagca aataaaattg cgacttgtgt taaaggtaag
     2461 ttttcatggg gacatattaa ttcagatcaa cgcttaacga aaccattagt aaggaaaaat
     2521 ggtgagttcc atgaagtaga atgggatgaa gcattaaatg tcattgcaga taattttaca
     2581 tctattaaag aaaagtatgg cccagacgca ctatcattca tttcttcttc taaagcgacg
     2641 aatgaagaat cgtatttaat gcaaaaatta gcaagacaag ttattggcac taataacgtt
     2701 gataactgtt caagatattg ccaagcacct gcaacaaaag gcttatttag aacggttgga
     2761 cacggcggtg actcaggtag tattgaagat ttagaaaaag cagcaatgtc tgtattgatt
     2821 ggtacgaata cagccgaagc acacccggtt attgcatcac gcatgaaacg tgctcaaaaa
     2881 ttatttggac aaaaaataca tgtgtttgat attagaaaac atgaaatggc tgaacgtgcg
     2941 gatcgtttct atcaaccgaa accaggtacg gatttagcgt ggttaagtgc agtgacgaaa
     3001 tatatcattg atcatgactt acacgataaa gcctttatcg aagagtgggt tgaagatttt
     3061 gatgaatatt acaagtcatt agaaacattt acaatggcat tcgctgaaga ggctactggt
     3121 attccagaag cagagttgat taagttcgct gaagaatgtg ccaaagctga gtccgttgtc
     3181 atttgttggg caatgggtat cacacaacaa gacattggaa gtgattcaag tacagcaatt
     3241 tcaaacttat tattagttac tggaaattat cgtcgacctg gtacaggcgc gtatccatta
     3301 cgtggacata ataatgttca aggttgtagt gatatgggta gtatgcctga taaaattact
     3361 ggctatcaaa gtattgaagc ggacgatatt cgcgctaaat tcgaaaaaga atatggcgtt
     3421 aaattgaatc ctaaagttgg taaagataat catgaaatgg ttgaaggtgt ccatgatggg
     3481 gacattcatt cattatatct atatggagaa gatactggta ttgtagattc aaatattaat
     3541 tttgtacaag ctgcttttga aaaattagat ttcatggtag tccaagatga atttttaaca
     3601 tttacagcta catttgcaga tgttgtctta ccagcaagtc cttcattaga aaaagatggt
     3661 acttttacga atactgagcg acgtattcaa cgtttatacc aagcattgaa accattaggt
     3721 gattctaaac ctgactggaa aatattccaa gcaattgcta ataaattagg tttcgattgg
     3781 aattacaaac atccaagcga aattatggat gaaattgcta gactaacacc tctatatgct
     3841 ggggtaagtt atgatcgttt agaaggattc aatagtttac aatggcctgt gcatccagat
     3901 ggtacagatg aaccaatact ttatttagaa ggatttaatt tcgataatgg taaagcaaaa
     3961 ttattcccat tatcatttga taattacttt aagcaagatg aagtttatga tattcatgta
     4021 aacaatggtc gattgttaga gcacttccac gaaggtaaca tgacatatca aacaccaatg
     4081 cttaaataca aagtgccacg tgcatttgtt gaaatttctc cagagcttgc tgaagataga
     4141 ggcattcatg aaggtgcaga agttaagttg atttctgaaa caggagaagc ggtattacaa
     4201 gttcacgtga cagatcgtgt taaaggtaaa gaaatctata ttccattaaa taatgatgcg
     4261 atggaaaatg gagacctagg tgcaattaac ttattaacta atagtgatgt tgatcaatac
     4321 acggatacac catcttataa acgtacaagc tgtcgtttgg aggtaattac gaaacgtggt
     4381 aagtcaccgt tgaacccaaa taatttccgt gtcaataaaa aacgtcatcc gcagtacagt
     4441 gttcaagtac agaaaaaatg ggaacgtcca gattatgttt tcccaggaaa tcaggtggat
     4501 aaataatggc tgagagaata tcttctaaaa ttagacgctt agaaaaatca gaagaacaaa
     4561 ttaagttaga aagtttaaat gaagttacag aggcaattgc agcgaataaa gatagtatat
     4621 taaaagcaat caaacttatt aaagtgttag atgatgctaa aatattagat gctttaaatg
     4681 gcgcagttag aggacgtcaa gtgattatta ataaatttgc tgttgagctc aacaaagata
     4741 tctatactgg tctattaaca aatatggcat caatggtatt tttattaggt gaattaaatg
     4801 tatcagattt aagtgacttc cttaataaag ttaataaagg attacatgtt gcaaatcaag
     4861 cgagtcctaa tgcgaagaca tctgtaagaa gtctgttagg cgttttaaaa gatgacgaca
     4921 tgaaccgtag tttaacatat atgcttaata tgctaaaagg tatgtctcga gaagattaac
     4981 attacaatga aaaagtgttt ctacatgcaa gcagtgtagg agcacttttt taattttttt
     5041 aaaaattaaa aagggtgttt ttgatggaat aaatgaataa cattgaaaaa caaaaaaatc
     5101 acgtgctatt atgaatcaat catcgacagg cctatgaaac atcatgtatt attatgatta
     5161 tgtaagttat ttaaataaaa agggtgagtg catattaatt cgagaatgtt aaaaacgtca
     5221 gctgtaattt ctaatacatt attagtcata ggtttagtct gtctatttat gatgaaatta
     5281 gtgttagcta ttactttttt tgctgtttca ttatcaatta gtctagttgt ctttaatatg
     5341 atgttcagag atagaacaac gatgaaagta atcgttaacg cttctttttt aatcgtaata
     5401 ttagcgattg tagtggcata ttttttattg tctaagtaag aaaaatgagg ttttgtctat
     5461 atgaagaaga atttcaagtt acgcatttca acgctactat tgatagttat tttagttgtt
     5521 tttgctgtat tactcatcgt gaatgaaact aaattgttta aaaatgatgt gaattactct
     5581 tttgatgagg ctgtttcaat gcaacaaggg aaaggtattg tacagacaaa agaagaggat
     5641 ggtaaatttg ttgaagcaaa taataatgaa attgctaaag caatgactat ttcacataaa
     5701 gacaatgata tgaagtatat ggatatcaca gaaaaagtgc caatgtcgga atctgaagtt
     5761 aaccaattgc taaaaggtaa ggggatttta gaaaatcgag ggaaagtttt tctagaagct
     5821 caagaaaaat atgaggttaa tgtcatttat cttgttagcc atgcattagt agaaacaggt
     5881 aacggcaaat cagaattagc aaaaggcatt aaagatggaa aaaaacgcta ttacaacttt
     5941 tttggtatag gagcattcga tagtagtgct gttcgtagtg gaaaaagtta tgctgaaaag
     6001 gaacaatgga catcaccaga taaggcgatt attggtggtg caaagttcat tcgtaatgaa
     6061 tattttgaaa acaatcaact gaatttatat caaatgcgat ggaatccaga aaatcctgcg
     6121 caacatcaat atgcgagtga cattcgctgg gcagataaaa ttgcccaatt aatggataaa
     6181 tgctataagc agtttggtat aaagaaagat gatattagac aaatatatta taaataagac
     6241 atcagtgctt aaaggagctg gaacaattta ttgtttcgag ctcctttagc gcattctgag
     6301 tgtgttagtt aaatggattt taacctaaca aaaaacgcta tatagcatca aatatgctat
     6361 atcccacatc attgttacaa atgtacatta tgtaaatgaa tattgctgtc taaatgtgca
     6421 tgtaatatac aatggtgcag ataatacact taagtcttta aaaatgaaac gttagttcca
     6481 agagtcattt ttaaacaata gtgcatgtga taaaatagaa aagaatgaaa aatatagagg
     6541 tgacaatatg aagatagcaa ttataggtgc aggcatcggt ggattaacag ctgctgcatt
     6601 attacaagaa caaggtcata ctattaaagt ctttgaaaaa aatgagtcag ttaaagaaat
     6661 tggcgctggg attggtatcg gagataatgt gcttaaaaaa ctaggtaatc atgacttagc
     6721 taaaggtatt aaaaatgctg ggcaaatctt atctacaatg acagtgttag atgacaaaga
     6781 tcgcctgtta actactgtta aattaaaaag taatacattg aatgtgacgt taccacgcca
     6841 aacattaatt gacattatta aatcttatgt aaaagatgat acaatattta caaatcatga
     6901 agtcacgcat atagataatg agacagataa agttaccata catttcgcgg aacaagagag
     6961 tgaagcattt gatttatgta ttggtgctga tggaattcat tctaaagtga gacaatctgt
     7021 aaatgctgac agtaaagtat tatatcaagg gtatacatgc tttagaggtt taattgatga
     7081 tattgattta aagcatccgg attgtgcaaa agaatactgg ggaagaaaag gaagagtagg
     7141 tattgttccg ttattaaata atcaagcata ttggttcatt acaatcaact cgaaggaaaa
     7201 caatcataaa tatagttcgt ttggtaaacc tcatttgcaa gcatacttta atcactatcc
     7261 aaatgaagtt agagagatct tagacaaaca aagtgaaaca ggtatcttat tgcataatat
     7321 ttatgatttg aaaccactca aatcttttgt ttatggtcgt actattttac taggagatgc
     7381 agcacatgcg acaacgccta atatggggca aggtgctgga caagcaatgg aagatgctat
     7441 cgtattagta aattgtttta acgcatacga ctttgaaaaa gcattacagc gttatgataa
     7501 aatacgtgtc aaacatactg caaaagtaat taagcgttct agaaaaatcg gtaaaattgc
     7561 ccaatatcgt agtcgtttag ttgttgcagt tagaaatcgt attatgaaaa tgatgccaaa
     7621 tgcattagca gctggacaaa ctaaattctt atataaatcg aaagagaaat aatacaacaa
     7681 tatgaaaacc cccgtatgtt gaaatgagag ctcaacatat gggggttctt gtttttataa
     7741 tgtcattata ataaattcaa ttattagtta acgacaaatt gtggtttctc accttgaacg
     7801 gcactaattg cagcattagc aacaatttta gacatcatgt cacgtgcttc aaatgtagca
     7861 ttaccaatat gcggtgttaa tactacatta ttaagtgatt ttaagtcatc ggtaatatct
     7921 ggttcaaatt catatacatc aagtgcagca ccttcaattt cattatcttt caatgcttgc
     7981 actagtgctt gttcgtgcac gattggacca cgagaggcat tgattaaata cgccgtagat
     8041 ttcatcattt taaattgttc tgtatcaatt aaatgatgca ttttaggatt ataagcagcg
     8101 ttgatagtga taaaatctgc attctttaat agtgtatcta aatctacata ttttgcaccg
     8161 atttctcgtt ctttttcttc tttgcgatta ggtcctgtgt atagtacatc catgtcaaat
     8221 gctcttgcac gacgcgctac tgcactacca atttcaccta aaccgataat gccgattgtt
     8281 ttcccagata cttctctacc tctgaaaaat aaaggtgccc atccgtcaaa tccagttata
     8341 cgtgataatt ggtcgccttc aacaatacga cgcgctactg caagtactaa tccaattgtt
     8401 aaatcagcag tcgcgtttgt tgatgcttta ggtgtgtttg taacatctat acttttttct
     8461 cgagcatact cgatatcaat attattaaaa ccagcaccat agttggcaat gatttttaag
     8521 tctttaccag catcgataac atctttatca acgtttgtag ataataaact aattaaggca
     8581 gtcgcatctt taacaccttt aattaaagtg tctttatcga ctaatccttt accttcatac
     8641 atttcaactt caaaatgttc ttgtaaaagt tttaaaccta cttctggtat tgcaccagca
     8701 acataaactt tttccataaa agatcactcc ttttatctta gtatagtaga agattagaca
     8761 gtatacaact atgtcatgat gtcttgtgta tcaatgatgt aagcgtgtac ttttgatgga
     8821 ggtgatataa cttaggcact gtagaactat gaatattgta atgtggaaaa actggatcaa
     8881 ttaaattaga taacgtagtt ttaaagttaa atagtattga aaaaattaat attatgaata
     8941 tgggggggaa atataaataa gtaggtggca acgaaaaata gcaaaaaaag agcttctcct
     9001 ataaaggaaa gctcaaagtt ttttgatgac atatgtacta gaattaagtt tcaagacaat
     9061 atgtatcatc gtgtttatat taaatatgga tgtagttgta gttacctgct tcgcttgcag
     9121 aaatagttct agaacttact gagaaaggtc cgccactata attcatttct gaaattgtaa
     9181 ctgaaccatc actgtttaca ctttctacat atgcaacgtg accaaatggt ccttcagaag
     9241 attgtaggat agcgccttta gaaggtgtat ggtttactgt gaatccagca ccttgtgcag
     9301 cagcagccca attattagca tttccccaag tagaaccgat ttctccgcct actttatcat
     9361 atacatacca agtacattgt cctgcagtgt ataagttacc agaatgtgaa attgatgatg
     9421 tagttgtcgt agttgttgta gtcgttgtag tttgagtcgt attatagtta tagttgttat
     9481 aatttgtata attttcagca gcgtctgcat gttgtgcatg acctactaat gctgtaccaa
     9541 ttcctgctgt taacgtagtt gctgttacta attttttcat gaataaagtc ctccaaagtt
     9601 ctatatcttt ttttataaat aaaacgtagc gactgtttta ttctcacatc tcgaattgat
     9661 gacaatagtt actttaacaa aattaatgct tcttgtgggg aatgttattg atttgtaaaa
     9721 gaataaaaaa actttgacta attttgtaat aaaaattagt caaagttaca atgagattaa
     9781 cagataatta ataggaaata tttatttgta
//
LOCUS       DAKPJH010000096         9808 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.096, whole genome shotgun sequence.
ACCESSION   DAKPJH010000096 DAKPJH010000000
VERSION     DAKPJH010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9808
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.096"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            5..292
                     /gene="esxA"
                     /locus_tag="OY092_002077"
     CDS             5..292
                     /gene="esxA"
                     /locus_tag="OY092_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000918587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion effector EsxA"
                     /protein_id="HCX1077004.1"
                     /translation="MIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEISANWEGQ
                     AFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ"
     gene            375..3404
                     /gene="esaA"
                     /locus_tag="OY092_002078"
     CDS             375..3404
                     /gene="esaA"
                     /locus_tag="OY092_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HCX1077005.1"
                     /translation="MKKKNWIYALIVTLIIIIAIVSMIFFVQTKYGDQSEKGSQSVSN
                     KNNKIHIAIVNEDQPTTYNGKKVELGQAFIKRLANEKNYKFETVTRNVAESGLKNGGY
                     QVMIVIPENFSKLAMQLDAKTPSKISLQYKTAVGQKEEVAKNTEKVVSNVLNDFNKNL
                     VEIYLTSIIDNLHNAQKNVGAIMTREHGVNSKFSNYLLNPINDFPELFTDTLVNSISA
                     NKDITKWFQTYNKSLLSANSDTFRVNTDYNVSTLIEKQNSLFDEHNTAMDKMLQDYKS
                     QKDSVELDNYINALKQMDSQIDQQSSMQDTGKEEYKQTVKENLDKLREIIQSQESPFS
                     KGMIEDYRKQLTESLQDELANNKDLQDALNSIKMNNAQFAENLEKQLHDDIVKEPDTD
                     TTFIYNMSKQDFIAAGLNEDEANKYEAIVKEAKRYKNEYNLKKPLAEHINLTDYDNQV
                     AQDTSSLINDGVKVQRTETIKSNDINQLTVATDPHFNFEGDIKINGKKYDIKDQSVQL
                     DTSNKEYKVEVNGVAKLKKDAEKDFLKDKTMHLQLLFGQANRQDEPNDKKATSVVDVT
                     LNHNLDGRLSKDALSQQLSALSRFDAHYKMYTDTKGREDKPFDNKRLIDMMVDQVIND
                     MESFKDDKVAVLHQIDSMEENSDKLIDDILNNKKNTTKNKEDISKLIDQLENVKKTFA
                     EEPQEPKIDKGKNDEFNTMSSNLDKEISRISEKSTQLLSDTQESKSIADSVSGQLNQV
                     DNNVNKLHATGRALGVRANDLNRQMAKNDKENDLFAKEFKKVLQNSKDGDRQNQALKA
                     FMSNPVQKKNLENVLANNGNTDVISPTLFVLLMYLLSMITAYIFYSYERAKGQMNFIK
                     DDYSSKNHLWNNVITSGVIGTTGLIEGLIVGLIAMNKFHVLAGYRAKFILMVILTMMV
                     FVLINTYLLRQVKSIGMFLMIAALGLYFVAMNNLKAAGQGVTNKISPLSYIDNMFFNY
                     LNAEHPIGLALVILTVLVIIGFVLNMFVKHFKKERLI"
     gene            3404..3862
                     /gene="essA"
                     /locus_tag="OY092_002079"
     CDS             3404..3862
                     /gene="essA"
                     /locus_tag="OY092_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HCX1077006.1"
                     /translation="MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTL
                     FNKDSKAVNDAIAKQKKERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESD
                     KSPYIQNKQEKKIFPYILMSVGAFLTLGFVIFSIHKGRRTKNESARKSNI"
     gene            3834..4076
                     /gene="esaB"
                     /locus_tag="OY092_002080"
     CDS             3834..4076
                     /gene="esaB"
                     /locus_tag="OY092_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001071606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaB"
                     /protein_id="HCX1077007.1"
                     /translation="MNQHVKVTFDFTNYNYGTYDLAVPAYLPIKNLIALVLDSLDISI
                     FDVNTQIKVMTKGQLLVENDRLIDYQIADGDILKLL"
     gene            4089..5423
                     /gene="essB"
                     /locus_tag="OY092_002081"
     CDS             4089..5423
                     /gene="essB"
                     /locus_tag="OY092_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HCX1077008.1"
                     /translation="MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEH
                     FHLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIK
                     NLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPMSEAEFLTRYKALVIC
                     AFNEKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTSFLDEQYQKQEQDYSENYAY
                     VRKVGHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLN
                     TYDDLDGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELG
                     QGHLDEAIDIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILD
                     KEKQVKDEKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK"
     gene            5445..>9808
                     /gene="essC"
                     /locus_tag="OY092_002082"
     CDS             5445..>9808
                     /gene="essC"
                     /locus_tag="OY092_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HCX1077009.1"
                     /translation="MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHL
                     EQNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGPNAYD
                     DMVIQSLMNAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVE
                     GIWLEVQADGLNVLSQNTVASSLIRLTQEMPHAQADDYNTYHRSPRIIHREPTDDIKI
                     ERPPQPIQKNNTVIWRSIIPPLVMIALTVVIFLVRPIGIYILMMIGMSTVTIVFGITT
                     YFSEKKKYNKDVEKREKDYKAYLDNKSKEINKAIKAQRFSLNYHYPTVAEIKDIVETK
                     APRIYEKTSHHHDFLYYKLGIANVEKSFKLDYQEEEFNQRRDELFDDAKELYEFYTDV
                     EQAPLINDLNHGPIAYIGARHLILEELEKMLIQLSTFHSYHDLEFLFVTREDEVETLK
                     WARWLPHMTLRGQNIRGFVYNQRTRDQILTSIYSMIKERIQAVRERSRSNEQIIFTPQ
                     LVFVITDMSLIIDHVILEYVNQDLSEYGISLIFVEDVIESLPEHVDTIIDIKSRTEGE
                     LITKEKELVQLKFTPENIDNVDKEYIARRLANLIHVEHLKNAIPDSITFLEMYNVKEV
                     DQLDVVNRWRQNETYKTMAVPLGVRGKDDILSLNLHEKAHGPHGLVAGTTGSGKSEII
                     QSYILSLAINFHPHEVAFLLIDYKGGGMANLFKDLVHLVGTITNLDGDEAMRALTSIK
                     AELRKRQRLFGEHDVNHINQYHKLFKEGIATEPMPHLFIISDEFAELKSEQPDFMKEL
                     VSTARIGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQDRQDSNEILKTPDAAD
                     ITLPGRAYLQVGNNEIYELFQSAWSGATYNIEGDKLEVEDKTIYMINDYGQLQAINKD
                     LSGLEDEETKENQTELEAVIDHIESITTRLEIEEVKRPWLPPLPENVYQEDLVETDFR
                     KLWSDDAKEVELTLGLKDVPEEQYQGPMVLQLKKAGHIALIGSPGYGRTTFLHNIIFD
                     VARHHRPDQAHMYLFDFGTNGLMPVTDIPHVADYFTVDQEDKIAKAIRKIHDIISERK
                     RLLSQERVVNIEQYNKETGNSIPNIFLIIDNYDTVKESPFMEEYEEMMSKVTREGLAL
                     GVYIILSGSRSSAIKSAIFTNIKTRVALYLFENNELTNIIGSYKKGVKDVKGRAAIND
                     DNFTQFQIAQPFELAEGQTYNERIKNEVAQMKEFYVGDYPKHIPMMPDKVLMDDIQET
                     YDLEKIIHEEHKLPLGLDFEDVELVGFDLSQTNIFTSVKPVDIDNGLTLLEKQLNIIS
                     NEYEIATLDTKGILKNTGYEDYLYCGDKKEIISFKNELVSFIKNVEPRKKWIVVISDF
                     KEFINIASPNNDEIKTIFLDGPKNNVFPIIYGLYQETIGGFSSQIKLLKEIVSSAFVG
                     ISISEQELIKVRYKVNEK"
BASE COUNT         3881 a         1380 c         1754 g         2793 t
ORIGIN      
        1 ggcaatgatt aagatgagtc cagaggaaat cagagcaaaa tcgcaatctt acgggcaagg
       61 ttcagaccaa atccgtcaaa ttttatctga tttaacacgt gcacaaggtg aaatttcagc
      121 gaactgggaa ggtcaagctt tcagccgttt cgaagagcaa ttccaacaac ttagtcctaa
      181 agtagaaaaa tttgcacaat tattagaaga aattaaacaa caattgaata gcactgctga
      241 tgccgttcaa gagcaagacc aacaactttc taataatttc ggtttgcaat aagcattctg
      301 aaattggcaa agtcacattt tctaatgtgg ctttgcttat cattttttaa gaaaacaact
      361 gaaaggaaat aagcatgaaa aagaaaaatt ggatttatgc attaattgtc actttaatta
      421 ttataattgc catagttagt atgatatttt ttgttcaaac aaaatatgga gatcaatcag
      481 aaaaaggatc ccaaagtgta agtaataaaa ataataaaat acatatcgca attgttaacg
      541 aggatcaacc aacgacatat aacggtaaaa aggttgagct gggtcaagca tttattaaaa
      601 ggttagcaaa tgagaaaaac tataaatttg aaacagtaac acgaaacgtt gctgagtctg
      661 gtttgaaaaa tggtggatac caagtcatga ttgttatccc agaaaacttt tcaaaattgg
      721 caatgcaatt agacgctaaa acaccatcga aaatatcact acagtataaa acagctgtag
      781 gacaaaaaga agaagtagct aaaaacacag aaaaagttgt aagtaatgta cttaatgact
      841 ttaacaaaaa cttggtcgaa atttatttaa caagcatcat tgataattta cataatgcac
      901 aaaaaaatgt tggcgctatt atgacgcgtg aacatggtgt gaatagtaaa ttctcgaatt
      961 acttattaaa tccaattaac gacttcccgg aattatttac agatacgctt gtaaattcaa
     1021 tttctgcaaa caaagatatt acaaaatggt tccaaacata caataaatca ttattgagtg
     1081 cgaattcaga tacgttcaga gtgaacacag attataatgt ttcgacttta attgaaaaac
     1141 aaaattcatt atttgacgag cacaatacag cgatggataa aatgctacaa gattataaat
     1201 cgcaaaaaga tagcgtggaa cttgataact atatcaatgc attaaaacag atggacagcc
     1261 aaattgatca acaatcaagt atgcaagata caggtaaaga agaatataaa caaactgtta
     1321 aagaaaactt agataaatta agagaaatca ttcaatcaca agagtcacca ttttcaaaag
     1381 gtatgattga agactatcgt aagcaattaa cagaatcact gcaagatgag cttgcaaata
     1441 acaaagactt acaagatgcg ctaaatagca ttaaaatgaa caatgctcaa ttcgctgaaa
     1501 acttagaaaa acaacttcat gatgatattg tcaaagaacc tgatacagat acaacattta
     1561 tctataacat gtctaaacaa gactttatag ctgcaggttt aaatgaggat gaagctaata
     1621 aatacgaagc aattgtcaaa gaagcaaaac gttataaaaa cgaatataat ttgaaaaaac
     1681 cgttagcaga acacattaat ttaacagatt acgataacca agttgcgcaa gacacaagta
     1741 gtttgattaa tgatggtgtc aaagtgcaac gtactgaaac gattaaaagt aatgatatta
     1801 atcaattaac tgttgcaaca gatcctcatt ttaattttga aggcgacatt aaaattaatg
     1861 gtaaaaaata tgacattaag gatcaaagtg ttcaactcga tacatctaac aaggaatata
     1921 aagttgaagt caatggcgtt gctaaattga aaaaggatgc tgagaaagat ttcttaaaag
     1981 ataaaacaat gcatttacaa ttgttatttg gacaagcaaa tcgtcaagat gaaccaaatg
     2041 ataagaaagc aacgagtgtt gtggatgtaa cattgaatca taaccttgat ggtcgcttat
     2101 cgaaagatgc attaagccag caattgagtg cattatctag atttgatgca cattataaaa
     2161 tgtacacaga tacaaaaggc agagaagata aaccattcga taacaaacgt ttaattgata
     2221 tgatggttga ccaagttatc aatgacatgg aaagtttcaa agacgataaa gtagctgtgt
     2281 tacatcaaat tgattcaatg gaagaaaact cagacaaact gattgatgac attttaaata
     2341 acaaaaagaa tacaaccaaa aataaagaag atatttctaa gctgattgat cagttagaaa
     2401 acgttaaaaa gacatttgct gaagagccac aagaaccaaa aattgataaa ggcaaaaatg
     2461 atgaatttaa tacgatgtct tcaaatttag ataaagaaat tagtagaatt tctgaaaaga
     2521 gtacgcaatt gctatcagat acacaagaat caaaatcaat tgcagattct gttagtggcc
     2581 aattaaatca agtcgacaat aatgttaata agctacatgc gacaggtcga gcattaggcg
     2641 taagagcgaa tgacttgaac cgtcaaatgg ctaaaaacga taaagaaaat gatttattcg
     2701 ctaaagagtt taaaaaagta ttacaaaatt ctaaagatgg cgacagacaa aaccaagcat
     2761 taaaagcatt tatgagtaat ccggttcaaa agaaaaactt agaaaatgtt ttagctaata
     2821 atggtaatac agacgtgatt tcaccgacat tattcgtatt attgatgtac ttactatcaa
     2881 tgattacagc atatattttc tatagttatg aacgtgccaa aggacaaatg aatttcatta
     2941 aagatgatta tagtagtaaa aatcatcttt ggaataatgt cattacgtca ggtgttattg
     3001 gtacaactgg tttgatagaa ggattaattg tcggtttaat tgcaatgaat aagttccatg
     3061 tattagctgg ctatagagcg aaattcatct taatggtgat tttaactatg atggtcttcg
     3121 tacttattaa tacgtattta ctaagacagg taaaatctat cggtatgttc ttaatgattg
     3181 ctgcattggg tctatacttt gtagctatga ataatttgaa agcagctgga caaggtgtga
     3241 ctaataaaat ttcaccatta tcttatatcg ataacatgtt cttcaattat ttaaatgcag
     3301 agcatcctat aggcttggcg ctagtaatat taacagtact tgtgattatt ggcttcgtac
     3361 tgaacatgtt tgtaaaacac tttaagaaag agagattaat ctaatgttga tgaatagcgt
     3421 gattgcttta acttttttaa cagcatctag caataatggc ggacttaata ttgacgtgca
     3481 acaagaagag gaaaagcgaa tcaataatga tttaaatcaa tatgatacaa cgctatttaa
     3541 taaagacagc aaagcggtta atgatgcgat tgctaagcag aaaaaagaaa gacaacaaca
     3601 aataaaaaat gatatgtttc aaaatcaagc gagtcactcg actcgcttga atgaaactaa
     3661 aaaagtgtta ttttccaaat ctaacttaga aaagacttcg gagagtgata aaagccccta
     3721 tattcaaaac aagcaggaga aaaaaatatt cccgtacatt ttgatgtctg taggggcttt
     3781 tttgacttta ggatttgtca ttttttcaat tcataaaggg agacgaacga aaaatgaatc
     3841 agcacgtaaa agtaacattt gattttacta attataatta cggcacatat gacttagcag
     3901 taccagcata tttaccgatt aagaatctaa tagcattagt gttagacagt ttggatattt
     3961 cgattttcga tgtgaataca caaattaaag tgatgacgaa aggtcaatta cttgttgaaa
     4021 acgaccgact tattgattat caaatcgctg atggagatat tttgaagtta ctataggagg
     4081 aaaaatagat ggttaaaaat cataacccta aaaatgaaat gcaagatatg ttaacacctt
     4141 tagatgccga agaagcagct aaaacaaaat tacgtttaga tatgagagag attcctaagt
     4201 cttcaattaa accagaacat tttcatttaa tgtacttatt agaacaacat tctccatatt
     4261 ttatagatgc tgaactaact gaactacgtg atagtttcca aatacattat gacattaatg
     4321 acaatcatac accttttgat aatattaaat catttactaa aaatgaaaaa ttacgttact
     4381 tacttaatat caaaaattta gaagaagtaa atcgtacacg ctacacattt gtgttggcac
     4441 cagatgaatt atttttcaca agagatggat tgccgattgc caaaacgaga ggattacaaa
     4501 atgttgttga ccctttgcca atgtcggaag ctgaattttt aacaagatat aaagcactgg
     4561 ttatatgtgc attcaatgag aaacaatcat ttgacgcatt agttgaagga aacttagaac
     4621 tacataaagg aacaccattt gaaactaaag ttattgaagc ggcaacgtta gacttattaa
     4681 cttcgttttt agatgaacaa tatcagaaac aagaacaaga ttatagtgaa aattatgcat
     4741 atgttcgtaa agtagggcat accgttttta aatgggtcgc tatcggtatg acaacgttaa
     4801 gtgtgttatt aattgcattt ttagcttttt tatatttttc agtaatgaag cataatgagc
     4861 gcattgaaaa aggataccaa gcatttgtaa aggatgatta tacgcaagta ctaaatacgt
     4921 atgatgattt agatggtaaa aaattagaca aagaagcgct ttacatttat gccaaaagct
     4981 atatccaaac gaacaaacaa ggtttagaaa aagataagaa agaaaacttg cttaataatg
     5041 tgacgccaaa ttcgaacaaa gattacttat tatattggat ggaattagga caaggacatc
     5101 ttgatgaagc gattgacatt gcaacatatt tagatgataa cgatattacg aaattagcgt
     5161 tgattaataa attaaatgag attaaaaata atggtgattt atcgaatgat aaacgttctg
     5221 aagaaactaa aaaatataac gataaattgc aagatatttt agataaagaa aagcaagtta
     5281 aagatgaaaa agcaaaatct gaagaagaga aagcaaaagc gaaagatgag aaattaaagc
     5341 aacaagaaga gaacgaaaag aaacaaaaag aacaagcaca aaaagataaa gaaaaacgtc
     5401 aagaagctga aagaaaaaaa tagtatagga ctgaggcaaa gacaatgcat aaattgatta
     5461 taaaatataa caaacaattg aagatgctca atttgcgaga tggtaagaca tatactatta
     5521 gcgaagacga gcgtgcagat attacgttga aatcgttagg cgaagtcatt catttagaac
     5581 aaaataatca aggtacttgg caagcgaatc atacttctat taataaggtg cttgttagaa
     5641 aaggtgacct tgatgacatt acattacaac tttatacaga agctgattat gcatcatttg
     5701 cttatccttc aattcaagat acgatgacaa ttgggccaaa tgcgtatgat gatatggtta
     5761 ttcaaagctt gatgaatgcc atcattatta aagattttca atcaatacaa gaatcacaat
     5821 acgtacgcat tgtgcacgat aaaaatacag atgtgtatat taactatgaa ctacaagagc
     5881 aattaacaaa caaagcttac attggtgatc atatttatgt tgaagggata tggctcgaag
     5941 tacaagctga tggtttaaat gtattgagtc agaatacagt ggcatcgtca ttaattcgct
     6001 taacacaaga gatgccacat gcacaggcag atgattacaa tacgtaccat cgttcgccaa
     6061 ggattattca ccgtgaaccg accgatgata ttaagattga aagaccacca cagccaatac
     6121 agaagaacaa tacagtgata tggcgttcca ttataccgcc attagtaatg attgctttaa
     6181 ctgttgtcat ctttttagtg agaccaattg gtatttatat tttaatgatg attggtatga
     6241 gtacagtaac gatagtattt ggtattacaa cgtatttctc tgaaaagaaa aagtataaca
     6301 aagatgttga aaaacgagag aaagattaca aagcttattt ggataataaa tctaaagaaa
     6361 ttaataaagc gattaaagca caacgtttta gtttgaatta tcattatcca acggttgctg
     6421 aaattaaaga tatcgttgaa acgaaagcac caagaatata tgaaaaaaca tcgcatcatc
     6481 acgatttctt atattataag ttaggtattg cgaatgtaga aaagtcattc aaattagatt
     6541 accaagaaga agaatttaac caacgtcgtg atgaactatt cgacgatgct aaagaattgt
     6601 atgaatttta cacagatgta gaacaagcac cattaatcaa tgatttaaat catgggccaa
     6661 ttgcatatat tggtgcacga catctcattt tagaagaatt ggagaaaatg ctaatccaat
     6721 tgtcaacgtt ccatagttat catgatttag agtttctatt tgtgacacgt gaagatgaag
     6781 ttgaaacatt gaaatgggca cgttggttgc cacatatgac attgagaggt caaaacatta
     6841 gagggtttgt ttacaatcaa cgaacacgtg accaaatttt aacgtcaatt tatagcatga
     6901 ttaaagaacg tatccaagct gtgcgtgaac gcagcagaag taatgagcaa attattttca
     6961 caccgcaatt agtgtttgtc attacagata tgtcattaat tattgatcac gtcattttag
     7021 aatatgtaaa ccaagattta tcagaatatg gtatttcatt aatctttgtt gaagatgtga
     7081 ttgaaagttt gccagagcat gtagatacca ttattgatat caagtctcgt actgaaggcg
     7141 aactgattac gaaagaaaaa gaattagttc aattgaaatt tacacctgaa aatattgata
     7201 acgtcgataa agaatatatc gcgcgacgtt tggcgaattt gatacacgtc gaacatttga
     7261 aaaatgcaat tcctgatagt attacatttt tagaaatgta taacgtgaaa gaagtagatc
     7321 agcttgatgt ggttaatcga tggagacaaa acgaaacata caaaacgatg gcagtacctt
     7381 taggtgtaag aggtaaagat gacattttat cattgaactt acatgaaaaa gcacacggac
     7441 cacatggttt agttgctggt accactggtt cagggaaatc tgagattatc caatcataca
     7501 ttttatcttt agctattaat tttcacccgc atgaagttgc attcctattg attgactata
     7561 aaggtggggg tatggcgaac ttatttaaag atttagtcca tttagttggt acgattacaa
     7621 acttagatgg cgatgaagcg atgcgtgcct taacatcaat caaagccgaa ttgagaaaac
     7681 gtcaacgttt attcggagag catgatgtta accatattaa tcaataccat aagttattta
     7741 aagaaggtat tgcgacagaa ccaatgccac atttattcat tatttccgat gaatttgccg
     7801 aattaaaatc agaacaacct gattttatga aagaacttgt atcaacggca cgtattggac
     7861 gttcgttagg tattcattta atacttgcga cacaaaaacc atcgggtgtt gttgatgacc
     7921 aaatttggtc taactctaaa tttaaattgg cattaaaagt acaagataga caagacagta
     7981 atgaaatttt aaaaacacca gatgcagcag acattacatt accaggtcgc gcgtatttac
     8041 aagttggtaa taatgaaatt tatgaattgt tccaatctgc atggagtgga gcaacatata
     8101 acatcgaagg cgataaatta gaagttgaag ataagacgat ttacatgatt aatgactatg
     8161 gtcaacttca agcaatcaac aaagacttga gtggacttga agatgaagaa acgaaagaaa
     8221 atcaaactga gttagaagcg gttatcgatc atatcgaatc tattacaaca cgattagaaa
     8281 ttgaagaagt taagcgtcca tggttaccac cattaccaga aaatgtatat caagaagatt
     8341 tagtagaaac agatttcaga aaattatggt cagatgatgc aaaagaagtg gaattaacat
     8401 taggacttaa agacgtacca gaagaacaat atcaagggcc gatggtatta caattgaaaa
     8461 aagctggtca catcgcgtta atcggaagtc caggatatgg tagaacaacg ttcttacaca
     8521 acattatttt cgatgttgca agacaccatc gtcctgatca agcacacatg tacttgttcg
     8581 atttcggaac taatggtttg atgccagtca cagacatacc acatgttgct gattatttta
     8641 cagtagatca agaagacaag attgcgaagg cgatacgtaa gatacatgat attatttctg
     8701 agcgaaaaag actattaagt caagagagag tagttaatat agagcaatat aataaagaaa
     8761 ctggaaattc aattccaaat attttcttaa ttatcgataa ctacgacacg gtgaaagaat
     8821 caccatttat ggaagaatat gaagaaatga tgtctaaggt aacacgtgaa ggtttagcat
     8881 taggggtata catcattctt tcaggatcaa gatcaagtgc aataaaatca gctatattta
     8941 ctaacattaa aacaagagtt gcactatacc tctttgaaaa taatgaatta acaaatatta
     9001 ttggttctta taaaaaaggt gtgaaagatg ttaaaggtag agctgcaata aatgatgata
     9061 acttcacaca gttccaaatt gcgcaaccat ttgaattagc agaaggacaa acatataacg
     9121 agcgcattaa aaatgaagta gcacaaatga aagaattcta tgtaggagat tatccaaaac
     9181 atatcccaat gatgccagat aaggtattaa tggatgatat tcaagaaaca tatgatttgg
     9241 aaaaaatcat tcatgaagaa cacaaattac cattaggatt agactttgag gatgtggaac
     9301 tagttggttt cgacttaagt caaacaaata ttttcacttc agttaaacct gttgatatag
     9361 ataatggttt aactttatta gagaaacagc taaatataat ttcaaatgaa tatgaaattg
     9421 caactttaga cacaaaaggc atattaaaaa atacagggta tgaagattat ttgtactgtg
     9481 gagataagaa agaaattatt agttttaaaa atgaattagt gagttttata aaaaatgtag
     9541 aaccacgaaa aaaatggata gtagttatat cggattttaa agaatttata aatattgcat
     9601 caccaaataa tgatgaaata aaaactatat ttttagacgg accaaagaat aatgtctttc
     9661 caattattta cggattgtat caagaaacaa ttggaggatt tagttctcaa ataaagttac
     9721 ttaaggaaat agtcagtagc gcttttgtag gaattagtat tagcgaacaa gaattaataa
     9781 aagttcgtta taaagtaaat gaaaaaaa
//
LOCUS       DAKPJH010000097         9385 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.097, whole genome shotgun sequence.
ACCESSION   DAKPJH010000097 DAKPJH010000000
VERSION     DAKPJH010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9385
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.097"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..1115)
                     /locus_tag="OY092_002083"
     CDS             complement(<1..1115)
                     /locus_tag="OY092_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCX1077010.1"
                     /translation="MKLSLNSNSKYLRAPSIRQFSNRMKGLDDCVNLTIGQPDFPMPD
                     VVKRAYIDAINNNQTSYSHNKGLLETREAISQYFKNRYHFYYDPEEIIVTNGASEAID
                     TTLRSIIEPGDEIIIPGPIYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPK
                     TKAVLLNYPTNPTGVVLKRNEVLNIVNVLKKYPIFIISDEIYAENTFSGKHVSFAEFE
                     DIRDQLILIGGLSKSHSATGIRIGFLLGPQYLIEKLTFMHAYNCICANVPAQIACITA
                     LNEGLEAPKYMNEAYVERRNYLVSELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFC
                     VDLLESTHLAIVPGSSFTEFGKGFVRISYAYEMDVLK"
     gene            complement(1311..2321)
                     /locus_tag="OY092_002084"
     CDS             complement(1311..2321)
                     /locus_tag="OY092_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HCX1077011.1"
                     /translation="MTSLKERDYFFDNARAILILLVVFGHMLQPYTSGDKYLSALYLV
                     IYSFHMPTFLFISGYFAKNIDKPYYLEKISKRLIVPYMIFFAFFSIYYFLTGKSDELQ
                     LDPFNPVFALWFLITLFFFHVILVIVRRFNPYKVLSVSIIISIGAGFSGNIDSYLSIS
                     RTIVFFPIFYLGYIFTKKHTAIFKNKKLIPVSIITFILFFIIYVIHPINADWLLGSSP
                     YTSLENEGQSVFSPFKRLILYGIILIAMTAFLNLISTKKKLYTYIGSRTLYVYLLHGL
                     IIGIVRGFEWYPFDNPISLMTYLYLISISVIIVYVLSTNFVCKWTNPIINLQRPSQFK
                     DS"
     gene            2474..2893
                     /locus_tag="OY092_002085"
     CDS             2474..2893
                     /locus_tag="OY092_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1077012.1"
                     /translation="MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILFNYD
                     RLSQYDLTMKISREQSIVSRWIKKLVLKGYITSQQSSEDLRCKELILTDQARTLISQI
                     NNARCELIEARCQCLSEVELDNLNQLLDKLNQRRISL"
     gene            2920..3030
                     /locus_tag="OY092_002086"
     CDS             2920..3030
                     /locus_tag="OY092_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077013.1"
                     /translation="MSLCTQQKLNHELQAKVAVIVKIDGKQSPLFLLVYV"
     gene            complement(3101..6874)
                     /locus_tag="OY092_002087"
     CDS             complement(3101..6874)
                     /locus_tag="OY092_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HCX1077014.1"
                     /translation="MAKKFNYKLPSMVALTLVGSAVTAHQVQAAETTQDQTTNKNVLD
                     SNKVKATTEQAKAEVKNPTQNISGTQVYQDPAIVQPKAANKTGNAQVNQKVDTTQVNG
                     DTRETQSTTSNNAKPVTKTTNTTASKTNNNVTSAGYSLVDDEDDNSENQINPELIKSA
                     AKPAALETQYKAAAPKATPVAPKAKTEATPKVTTFSASAQPRSVAAAPKTSLPKYKPQ
                     VNSSINDYIRKNNLKAPKIEEDYTSYFPKYAYRNGVGRPEGIVVHDTANDRSTINGEI
                     SYMKNNYQNAFVHAFVDGDRIIETAPTDYLSWGVGAVGNPRFINVEIVHTHDYASFAR
                     SMNNYADYAATQLQYYGLKPDSAEYDGNGTVWTHYAVSKYLGGTDHADPHGYLRSHNY
                     SYDQLYDLINEKYLIKMGKVAPWGTQSTTTPTTPSKPTTPSKPSTPSTGKLTVDANNG
                     VAQIKPTNSGLYTTVYDKTGKATNEVQKTFAVSKTATLGNQKFYLVQDYNSGNKFGWV
                     KEGDVVYNTAKSPVNVNQSYSIKPGTKLYTVPWGTSKQVAGSVSGSGNQTFKASKQQQ
                     IDKSIYLYGSVNGKSGWVSKAYLVDTAKPTPAPTPKPSTPTTNNKLTVSALNGVAQIN
                     AKNNGLFTTVYDKTGKPTKEVQKTFSVTKEASLGGNKFYLVKDYNSPTLIGWVKQGDV
                     IYNNAKSPVNVMQTYTVKPGTKLYSVPWGTYKQEAGAVSGTGNQTFKATKQQQIDKSI
                     YLYGTVNGKSGWISKAYLAVPAAPKKAVEQPKTAVKAYAVTKPQTTQTVSKIAQVKPN
                     NTGIRASVYEKTAKNGAKYADRTFYVTKERAHGNETYVLLNNTSHNIPLGWFNVKDLN
                     VQNLGKEVKTTQKYTVNKSNNGLSMVPWGTKNQVILTGNNIAQGTFNAAKQVSVGKDV
                     YLYGTINNRTGWVNAKDLTAPTAVKPTTSAAKDYNYTYVIKNGNGYYYVTPNSDTAKY
                     SLKAFNEQPFSVVKEQVINGQTWYYGKLSNGKLAWIKSTDLAKELIKYNQTGMTLNQV
                     AQIQAGLQYKPQVQRVPGKWTDANFNDVKHAMDTKRLAQDPALKYQFLRLDQPQNISI
                     DKINQFLKGKGVLENQGAAFNKAAQMYGINEVYLISHALLETGNGTSQLAKGADVVNN
                     KVVTNSNTKYHNVFGIAAYDNDPLREGIKYAKQAGWDTVSKAIVGGAKFIGNSYVKAG
                     QNTLYKMRWNPAHPGTHQYATDVDWANINAKIIKGYYDKMGEVGKYFDIPQYK"
     gene            complement(7102..7536)
                     /locus_tag="OY092_002088"
     CDS             complement(7102..7536)
                     /locus_tag="OY092_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077015.1"
                     /translation="MFLKVNNQKMLEDCFYIRKKVFVEEQGVPEESEIDEYESESIHL
                     IGYDNGQPVATARIRPINETTVKIERVAVMKSHRGQGMGRMLMQAVESLAIDEGFYVA
                     TMNAQCHAIPFYESLNFKMRGNIFLEEGIEHIEMTKKLTSLN"
     gene            complement(7693..8163)
                     /locus_tag="OY092_002089"
     CDS             complement(7693..8163)
                     /locus_tag="OY092_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499548.1"
                     /note="Essential protein for resistance to osmotic stress
                     from salt; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic stress response protein"
                     /protein_id="HCX1077016.1"
                     /translation="MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHR
                     ENYEALLIYYKNSIENPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMK
                     SLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL"
     gene            complement(8211..>9385)
                     /locus_tag="OY092_002090"
     CDS             complement(8211..>9385)
                     /locus_tag="OY092_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyisoprenyl-teichoic acid--peptidoglycan
                     teichoic acid transferase"
                     /protein_id="HCX1077017.1"
                     /translation="VPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQPI
                     SILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
                     YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLN
                     EPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVD
                     SIDKLDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYH
                     PSVDSIQKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDSSLLRKEQNDT
                     TDKDKSSNNSDDSNNSNSNNSVNNQQQPATDQNLNQNQGGTQQTPQASNNQNGVVN"
BASE COUNT         2907 a         1495 c         1527 g         3456 t
ORIGIN      
        1 tcttttaaaa catccatttc ataagcatag gaaatcctta caaatccttt accgaattct
       61 gtaaaggatg agcctggaac gattgctaaa tgtgttgatt caagtaaatc gacacaaaat
      121 tcgaaatcgt catcggtgat atgtttaata cttgggaaaa tataaaacgc gccttcaggt
      181 tgagcggtaa tctcaaaacc taatttagtt aattcagata ctaaataatt tcttcgttct
      241 acataagctt cgttcatata tttaggagct tctaatcctt cgttaagtgc tgttatacat
      301 gctatttgag ctggaacatt ggcacaaata caattatacg catgcataaa tgttaatttt
      361 tcaatgagat attgaggtcc taatagaaaa ccaattctta ttccagttgc tgagtgtgat
      421 ttacttaaac caccaattaa tattaattga tcacgaatgt cttcaaattc agcgaaagat
      481 acatgtttac cactaaatgt attttcagca taaatctcat cgctaataat aaatatcgga
      541 tattttttta atacatttac gatatttaaa acttcatttc tttttaaaac tacgccagtt
      601 ggattagtcg gataatttaa caagacagct tttgtctttg gagaaatatg actttctaac
      661 gcatcaggtg taattttgaa ttgtgttgct gttgtatcaa tataaattgg tttaccacct
      721 agtacttcga tgagtggtat gtagcctgca taaattggtc ccggtattat aatttcatct
      781 ccaggctcta tgatagaacg taacgttgtg tctattgctt cactagctcc atttgtcaca
      841 ataatttctt caggatcata gtaaaaatga taacgatttt tgaagtattg actaattgct
      901 tcgcgagttt ctaataaccc tttattgtga gagtatgaag tttgattatt gtttatggca
      961 tcgatatatg cacgtttcac tacgtctggc ataggaaagt caggttgccc aattgttaaa
     1021 ttaacacaat catcaagacc tttcatgcgg tttgaaaatt ggcgaatact tggggctctt
     1081 aaatatttag aattagaatt taaagaaagt ttcatttgtg acacctcaaa tataaatcaa
     1141 atattgtcta aaaatttaga aattaataat atcataacat acttttaaag caaaaaaggg
     1201 taaattactt aagctttatt tgaaaaacga aaaatgtcta aatacactgt agtaactact
     1261 tttcaaaatg aataaagtgg ttacagttaa tgtacttaga cattatataa ttatgagtct
     1321 ttaaactgtg atggtctttg taaattaatt attggatttg tccatttaca aacaaagttt
     1381 gtagataata catatacgat gattacagat atacttatta aataaagata cgtcattaat
     1441 gatataggat tatcgaatgg gtaccattca aatcctctaa caatgccaat aattaaacca
     1501 tgtaataaat atacgtatag cgtacgacta ccaatataag tatataattt tttctttgtt
     1561 gatattaaat ttagaaacgc agtcattgcg attaatataa ttccatataa tataagtcgt
     1621 ttaaaaggac tgaatacact ctgtccttca ttttcaagtg aagtatatgg tgaacttcct
     1681 aataaccaat ctgcattgat aggatgaatc acgtaaatga taaaaaacaa aataaacgta
     1741 atgatagata ctggtattag ttttttattt ttaaaaatag ccgtatgttt tttggtgaaa
     1801 atgtaaccta ggtaaaatat tgggaaaaat acgattgtcc ttgaaatgct taagtagcta
     1861 tcgatgtttc ctgaaaaacc tgctccaata gatataataa ttgaaactga tagcacttta
     1921 tatggattaa atcttctaac tattactaaa atgacatgaa agaaaaatag cgtgatcaaa
     1981 aaccataacg caaatactgg gttaaaagga tcaagttgta attcgtcact tttacctgtt
     2041 aagaaataat atattgaaaa gaatgcaaaa aatatcatat aaggtactat caaacgtttt
     2101 gaaatttttt ctaaatagta tggtttatca atatttttcg cgaaataacc agatataaac
     2161 aaaaatgttg gcatatggaa actataaata actaggtata atgctgataa atatttatcg
     2221 ccactagtgt agggttgtaa catatgtcca aatacgacta ataatattaa aattgctctt
     2281 gcgttgtcaa aaaaataatc tctctctttt aatgaagtca tattttatct cctttatgtc
     2341 cataagactc ttactaattt attatatttt gtattagtta tgcaacaaat ttgtctattg
     2401 tgtcgaatag tattgtaaaa attataaaaa aagcatataa tattataaat aatatgtagt
     2461 ggagtagaac aacatgtata aacaacttga aaaacttatt acactgacta acaatgactt
     2521 aaacttagtg aatagaagat ttggacaacg cacggatatc acatctgaac agctagaact
     2581 tctccgtatt ttatttaatt acgatcgctt atcacagtat gatttgacga tgaagattag
     2641 cagggaacaa tctatagttt caaggtggat taagaaatta gttttgaaag ggtacatcac
     2701 aagtcaacaa tctagcgaag atttaagatg taaagaatta attttgactg atcaagcacg
     2761 tacattaatt tcacaaataa ataatgcacg ttgcgaattg attgaagcaa gatgtcaatg
     2821 tttatcggaa gtcgaattag ataatttaaa tcaattactt gataagttaa atcaacgacg
     2881 catatcgttg taacacgaca atagcaaaca cataatttag tgtcattgtg cacacaacaa
     2941 aaattgaatc atgaattaca agcaaaagta gcggtgattg ttaaaattga tggtaaacaa
     3001 tcaccgctat ttttgcttgt gtatgtataa aaaagggatc aaaggtcatc ccccatgatt
     3061 gatagtgggg ggatgacttt tgatcctatg ttcatgttgc ttatttatat tgtgggatgt
     3121 cgaagtattt gccgacttcg cccattttat catagtagcc tttgatgatt ttagcattga
     3181 tgttagccca atctacatct gtagcatatt ggtgtgttcc tggatgtgca ggattccatc
     3241 tcattttgta aagcgtattt tgaccagctt ttacatatga gttgccgatg aatttagcac
     3301 caccaacgat ggcttttgaa actgtgtccc aaccagcttg tttagcatat ttaatacctt
     3361 cacgtaaagg atcgttatca tatgcagcaa taccaaatac gttatggtat ttcgtgttag
     3421 agttagttac aactttgttg ttcactacat ctgcaccttt tgctaattga gaagtaccgt
     3481 tacctgtttc taatagggca tgtgagataa gataaacttc attaatgcca tacatttgag
     3541 cagctttgtt aaatgcagca ccttggtttt ctaatacacc tttacctttt aagaattgat
     3601 taattttatc aatagaaata ttttgtggtt ggtctaagcg taagaattga tattttaatg
     3661 ctggatcttg agctaaacgc ttcgtatcca ttgcatgctt aacatcatta aagttagcat
     3721 ctgtccactt acctggtaca cgttgtactt gtggtttata ttgtaaacca gcttgaattt
     3781 gagcaacttg gtttaatgtc atacctgttt gattatactt aattaattct ttagctaaat
     3841 cagtcgattt aatccatgct aatttaccgt tagataattt accatagtac caagtttgtc
     3901 cattaatgac ttgttcttta acaactgaga atggttgttc attaaatgct tttaatgagt
     3961 atttagctgt atcagaattt ggtgttacat agtaataacc attaccattt ttaattacat
     4021 aagtgtagtt ataatctttg gcagctgatg tagttggttt aacagcagtt ggtgcagtta
     4081 aatcttttgc atttacccaa ccagtgcggt tattaatagt accgtataaa taaacatctt
     4141 tgcctacaga tacttgtttc gctgcattaa atgtaccttg agcaatgtta ttgcctgtta
     4201 aaatgacttg gtttttagta ccccaaggaa ccattgataa gccgttattt gatttattaa
     4261 cagtatattt ttgagtcgtt ttaacttctt tgcctaagtt ttgaacattt aagtctttaa
     4321 cattgaacca acctaatgga atattatgac ttgtattatt taataataca tatgtttcat
     4381 taccatgtgc acgttctttt gttacataga atgtacgatc cgcatatttt gcgccgtttt
     4441 tcgctgtttt ttcataaaca gaagcacgaa taccagtgtt gtttggttta acttgagcaa
     4501 ttttgctaac tgtttgagtc gtttgtggtt tagtaacagc ataagctttt acagctgttt
     4561 ttggttgttc tacagctttt ttaggtgcag caggtacagc taaatatgct ttactaatcc
     4621 atccggattt accatttaca gttccatata aatagataga tttatcaatt tgttgttgct
     4681 tagtcgcttt aaaagtttgg ttacctgtgc cagaaaccgc accagcttct tgtttataag
     4741 taccccaagg tactgaatat aatttagtgc ctggttttac tgtatatgtt tgcattacat
     4801 ttacaggtga ttttgcattg ttataaataa cgtcaccttg tttaacccaa ccaattaaag
     4861 ttggactatt gtaatcttta actaggtaga atttgtttcc acctagactt gcttcttttg
     4921 ttacagaaaa tgttttttga acttctttcg ttggcttacc agttttgtca taaactgtag
     4981 tgaataaacc attgttttta gcattaattt gagcaacacc atttaatgct gagactgtta
     5041 atttattatt tgttgtcggc gttgatggct taggtgttgg tgcaggtgta ggtttagcag
     5101 tatcaactaa atatgcttta cttacccaac cagatttacc attcacagag ccatataaat
     5161 aaattgattt atcaatttgt tgttgctttg aagccttaaa tgtttggttt ccagagccag
     5221 acacgctacc agcaacttgt ttagatgtac cccaaggtac tgtataaagt ttcgtaccag
     5281 gtttgattga atatgattga tttacattta caggtgattt agctgtgttg taaaccacat
     5341 cgccttcttt aacccaacca aatttattac cagaattgta atcttgaacg agatagaatt
     5401 tttgattacc taatgtagct gttttagata cagcaaatgt tttttgaact tcattagttg
     5461 ccttaccagt tttgtcgtaa acagtagtat ataaaccact atttgttggt ttgatttgtg
     5521 cgacaccatt attagcatca actgttaatt taccagttga tggtgttgat ggtttcgacg
     5581 gtgttgttgg ttttgatggt gtagtagggg tagttgtaga ttgcgtaccc catggcgcca
     5641 ctttacccat ttttattaaa tatttttcat taattaagtc atataattga tcataactat
     5701 aattatgact tcttaaatat ccatgtggat cggcatggtc cgtaccacct aaatatttac
     5761 ttacagcgta gtgagtccat actgtaccat ttccatcata ctcagcactg tctggtttta
     5821 aaccataata ttgtaattgt gtagctgcat agtcagcata gttattcatt gaacgtgcaa
     5881 atgaagcata atcgtgtgtg tgtacgattt caacattgat gaatctaggg ttaccgactg
     5941 cacctacacc ccatgataag taatccgttg gtgctgtttc aattatacga tccccatcaa
     6001 caaacgcatg aacgaaagca ttttgataat tgtttttcat ataactaatt tcgccattta
     6061 tcgtcgaacg atcattagct gtatcatgaa ctacgattcc ttcaggacga cctacgccgt
     6121 tacggtatgc gtatttaggg aagtaagatg tataatcttc ttcaatctta ggtgctttta
     6181 aattattttt acgaatgtaa tcgttaattg atgagtttac ttgcggttta tattttggca
     6241 aactcgtttt tggtgctgca gcgactgatc ttggttgtgc tgaagcacta aaagtagtta
     6301 cttttggtgt agcttcagtt ttagctttag gtgcaacagg tgttgctttt ggtgctgcgg
     6361 ctttatattg cgtttcaaga gcagcaggtt tagcagctga tttaattaat tctggattta
     6421 tttgattttc tgaattatca tcttcatcat caactaaact atatccagca cttgtaacat
     6481 tattgttcgt tttagatgct gttgtgttag ttgtttttgt aacaggtttc gcattatttg
     6541 atgtagttga ttgagtctca cgagtgtcac catttacttg tgtagtatca accttttgat
     6601 ttacttgagc attgcctgtt ttattcgctg cttttggttg gacaatagca gggtcttgat
     6661 atacttgagt gccagaaatg ttttgcgttg gattttttac ctcagctttt gcttgttcag
     6721 tagttgcttt aactttatta ctatctaaaa cgtttttatt agtagtttga tcttgtgtcg
     6781 tctcagctgc ttgaacttga tgtgcagtga ctgctgaacc tacaagcgtt aatgcaacca
     6841 ttgatggtag tttgtaatta aattttttcg ccattctatt tattactcct aacatttatt
     6901 aattattaat ctcattatag tacctgtttt atacacctgt gcgtatttaa ccaatttgta
     6961 atatactctt aatttatatt ttcactgtaa aaaaatgaaa aaaattttga atctcaatgg
     7021 tgacgtgaca aatcaaatag aattgatgtc aatttaagaa ttggtttatt acaaatgttt
     7081 ctataataga tacaactttt tttaattaag cgaggtcaac ttttttgtca tttcaatatg
     7141 ctcgatgcct tcctcaagaa atatattacc tctcatttta aaatttaaac tttcatagaa
     7201 tggaattgca tgacattggg cattcatggt agctacgtaa aaaccttcat ctatagctaa
     7261 tgactctaca gcttgcataa gcattctacc catgccttgt ccgcgatgtg atttcatcac
     7321 agctactcgt tctattttga cagttgtttc attaataggg cgtattcgag cagtggcaac
     7381 tggctgccca ttgtcatacc caatcaggtg aatagattca gattcatatt catcaatttc
     7441 actttcctct gggacgcctt gttcttctac aaacactttc tttcttatat agaagcaatc
     7501 ttctaacatc ttttgattgt ttacttttaa aaacataaaa tccctccata tcccaacaaa
     7561 atcatttata tttaatttac taataataac atagaataac gattgttatt tttcacaaaa
     7621 ataattagac ataaaaaatg ctataaaaat gattcatagg aaccatcttt atagctagat
     7681 agagtgtatt tgttataatg cttcttttct aataattgct gtatattgcc aaaagattcg
     7741 catttgagca atattccaat tattcatccc cattgtaaac ccagaaggtt taaagatatt
     7801 tacatctgtc acttctaaag ctgctgcgac taaatattgt aatggaatac taagtgattt
     7861 cattgtttca gtaatgccat tttcatcata tacccatgaa aatggtaact ctgattcgaa
     7921 aacatcaaca ctattgaaaa tttcaggtag ggctaaaata taacatgcac catctacaat
     7981 aggattctcg atactatttt tgtaataaat taggagtgct tcatagtttt ctcgatgctc
     8041 atgattgacg taaaaaaatt cacttctaaa atgagccata tcttggctat gaataatttg
     8101 ttgttctaac atattaaaca tcccatttat atttgcaatc ttttcgtatg tttttctact
     8161 catgtatgat gctcctttca taaatagtaa atgttaatcg tcatataata ttagtttaca
     8221 acaccatttt ggttatttga agcttgtggc gtttgttgag tgccaccttg attttgattt
     8281 aagttttgat ctgtagcagg ttgttgttga ttattgacgc tattgttgct attactgtta
     8341 ttactgtcgt cgctattatt cgaagattta tctttatcag tcgtatcgtt ttgttctttt
     8401 ctcaataaac tactatctaa aggcgttaat ggtattaatg aaccataatg attgatgaca
     8461 cgttgatcta agaaatcatt tttatcatta ataggtgata attctaagtc tttacgaagt
     8521 aagtttgcat atttttgaat gctgtctaca cttggatgat aatagtaaat accatttaac
     8581 atatcatctt taccttttaa ttgcgcagtt ttaatttcaa catcatttgt taagtacatt
     8641 tttgctaaag ctttaatttc agagttagtt aaattatgct ttgcattttt acctacaatt
     8701 tgaatcacgt tatcaagttt atcaatagaa tcaacttcct gtgctttttg gaataaaatc
     8761 ttaattaatt ccatttgacg ttgtccacgt ttcaagtctg aatcatgatg tctagttcta
     8821 gcaactgcta aagcctcatc accatttaat ttttggtacc cttttttaat tttaatctta
     8881 ccagtatcat ctgtatttgg ctcatttaaa tcatatggta catcatagta tatgccacca
     8941 agttcattta cagcttctac aaaggccttc atattaacgc gtacatagta atcaactgga
     9001 acattcatcg ttgcttcaac agagtccatt gctgcaattg gaccaccata tgcatgtgca
     9061 tgggtaattt tatcgtagta gccgacttta ggaatgtagc tgattgtatc acgaggaata
     9121 ctaagcattc gaatttggtg tttagattga ttaaaagtag ttaaaatcat agcgtctgat
     9181 ctagagtgtt cagcatcttg gccttttttt cttcttccgt cattatcatc gatacctaag
     9241 aagagaatag agataggttg ttcttcagga ttaactttat tgtctcgtaa atttgattga
     9301 cgattagcat ttttactatc ttgagaagat tcaaatgcat cttgagacgt tttaaaaagt
     9361 aacgtagcga agacaattgg aacaa
//
LOCUS       DAKPJH010000098         9328 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.098, whole genome shotgun sequence.
ACCESSION   DAKPJH010000098 DAKPJH010000000
VERSION     DAKPJH010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9328
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.098"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(123..1940)
                     /locus_tag="OY092_002091"
     CDS             complement(123..1940)
                     /locus_tag="OY092_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCX1077018.1"
                     /translation="MRIDQSIINEIKDKTDILDLVSEYVKLEKRGRNYIGLCPFHDEK
                     TPSFTVSEDKQICHCFGCKKGGNVFQFTQEIKDISFVEAVKELGDRVNVAVDIEATQS
                     NSNVQIASDDLQMIEMHELIQEFYYYALTKTVEGEQALTYLQERGFTDALIKERGIGF
                     APDSSHFCHDFLQKKGYDIELAYEAGLLSRNEENFSYYDRFRNRIMFPLKNAQGRIVG
                     YSGRTYTGQEPKYLNSPETPIFQKRKLLYNLDKARKSIRKLDEIVLLEGFMDVIKSDT
                     AGLKNVVATMGTQLSDEHITFIRKLTSNITLMFDGDFAGSEATLKTGQHLLQQGLNVF
                     VIQLPSGMDPDEYIGKYGNDAFTTFVKNDKKSFAHYKVSILKDEIAHNDLSYERYLKE
                     LSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPANYYPEDEYGGYDEYG
                     GYIEPEPIGMAQFDNLSRQEKAERAFLKHLMRDKDTFLNYYESVDKDNFTNQHFKYVF
                     EVLHDFYAENDQYNISDAVQYVNSNELRETLISLEQYNLNDEPYENEIDDYVNVINEK
                     GQETIESLNHKLREATRIGDVELQKYYLQQIVAKNKERM"
     gene            complement(2001..2819)
                     /locus_tag="OY092_002092"
     CDS             complement(2001..2819)
                     /locus_tag="OY092_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HCX1077019.1"
                     /translation="MEKIKIIVASDSIGETAELVARAGISQFNPKQCKNELLRYPYIE
                     SFEDVDEVIQVAKDTNAIIVYTLIKPEMKQYMSEKVAEFQLKSVDIMGPLMDLLSASV
                     EEKPYNEPGIVHRLDDAYFKKIDAIEFAVKYDDGKDPKGLPKADIVLLGISRTSKTPL
                     SQYLAHKSYKVMNVPIVPEVTPPDGLYDIDPKKCIALKISEEKLNRIRKERLKQLGLG
                     DTARYATEARIQEELNYFEEIVSEIGCPVIDVSQKAIEETANDIIHYIEQNKSK"
     gene            complement(2830..3453)
                     /locus_tag="OY092_002093"
     CDS             complement(2830..3453)
                     /locus_tag="OY092_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077020.1"
                     /translation="MELSQRQERIIEIVKTKGPITGEQIADKLNLTRATLRPDLAILT
                     MSGFLEARPRVGYYYSGKSKGKFFNEKLRQFEVKDYMSQPVVLRENTTVYDAICTIFL
                     EDVSTLFIINEDNDFVGVCSRKDLLRASMIGADIHTVPISVNMTRMPNVTYLEESELV
                     IYAADRMIEKEIDSIPIVRKKDNQKYEVIGRISKTTIAKLLVALYKE"
     gene            3788..5179
                     /locus_tag="OY092_002094"
     CDS             3788..5179
                     /locus_tag="OY092_002094"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HCX1077021.1"
                     /translation="MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNN
                     VKKAWWQKFITQSPFNVGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKL
                     IEDYMQDVKGDENFIADGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQG
                     VTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRT
                     REFEQMELEFFCKPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNA
                     TTDIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLG
                     ADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQ
                     LSSKFSIDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPI
                     SELEAFLTEKTKF"
     gene            complement(5330..6076)
                     /gene="recO"
                     /locus_tag="OY092_002095"
     CDS             complement(5330..6076)
                     /gene="recO"
                     /locus_tag="OY092_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HCX1077022.1"
                     /translation="MRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGL
                     QAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDE
                     GDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQAD
                     LIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEM
                     SDIILMLYREYAGMFFKSQKLINQLKRLEQ"
     gene            complement(6104..7003)
                     /gene="era"
                     /locus_tag="OY092_002096"
     CDS             complement(6104..7003)
                     /gene="era"
                     /locus_tag="OY092_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HCX1077023.1"
                     /translation="MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNK
                     IQGVMTRDDAQIIFIDTPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRG
                     DEYIIEMLKNVKTPVFLVLNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVD
                     HFIDVLKTYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRM
                     VKESEDRVHIEATIYVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWV
                     KVQRDWRNKVNFIRQIGYVEDQD"
     gene            complement(7004..7408)
                     /gene="cdd"
                     /locus_tag="OY092_002097"
     CDS             complement(7004..7408)
                     /gene="cdd"
                     /locus_tag="OY092_002097"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HCX1077024.1"
                     /translation="MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNV
                     ENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDD
                     DMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE"
     gene            complement(7419..7763)
                     /locus_tag="OY092_002098"
     CDS             complement(7419..7763)
                     /locus_tag="OY092_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HCX1077025.1"
                     /translation="MKRFKYALDGLKILIQKDYKFLLHVFAMIVAIVFGLVLNINRIE
                     WIFILIAIALVLTVEALNTAIEYVVDLVTVEYHDLAKYAKDIAAFSVLIVSILAFIIG
                     LIVFLPHFIALF"
     gene            complement(7766..8233)
                     /gene="ybeY"
                     /locus_tag="OY092_002099"
     CDS             complement(7766..8233)
                     /gene="ybeY"
                     /locus_tag="OY092_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HCX1077026.1"
                     /translation="MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTF
                     VDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSDLDIPRVLGDIIICTDVAQEQ
                     ANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLTRD"
     gene            complement(8234..9181)
                     /locus_tag="OY092_002100"
     CDS             complement(8234..9181)
                     /locus_tag="OY092_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HCX1077027.1"
                     /translation="MPGIIQIDDMNQSQALIGNNDEHLKAIEESFDVVIHARGQEVAV
                     KGTKIENVEKAESVLINLLKVIDLGNNITIKDVEAAIKMAHNNTIQHLLDLYDEEITK
                     DAFGKTIRAKTMGQRIYVNAMKNNDLVFGIGPAGTGKTFLAVVYAAKQLRKGAVKRIV
                     LTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLYTVLGREQTERFIERGIIEIAPLA
                     YMRGRTLEDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLK
                     EAVSRLHNVKGISILKLDQSDVVRHPLVSKIIEHYEGEN"
BASE COUNT         2929 a         1732 c         1297 g         3370 t
ORIGIN      
        1 ttacaaattg gaactaatcc caatatttat ttttcaatag tgttgtttaa atgcggtaac
       61 tatcatttac ccttatacat tttgacataa tcattattcg tattattctt taaaatcaca
      121 tgctacatgc gttctttatt cttagcaaca atttgctgta aatagtattt ttgtaattct
      181 acatcgccaa tccttgtagc ttcccttaat ttatgattca atgactcaat tgtttcttgt
      241 cctttttcat taataacatt gacataatca tcaatttcat tttcatatgg ttcgtcattc
      301 aaattatatt gttctaagct aattagtgtt tctctcaact catttgaatt aacatactgt
      361 acagcatcac tgatattata ttgatcattt tccgcataaa aatcatgtaa gacttcgaat
      421 acatatttaa aatgctgatt tgtgaagtta tccttatcaa cactttcata ataatttaaa
      481 aatgtatctt tatctctcat taaatgtttt aaaaatgctc gctccgcttt ttcttgacgg
      541 ctcaaattgt caaattgtgc cataccaatt ggctcaggtt caatgtaacc tccatactca
      601 tcataaccgc catactcatc ttctggataa taattggctg gtgcttgatt gaattgtatt
      661 tcgttagcta actgctcagg actaacattg aaaaatggcg caacatcatt tatagccttt
      721 tgttgcagaa ttgatgactt cataagtgaa atgtcatgac tcagttcttt caaataacgt
      781 tcatatgaaa ggtcattatg tgcaatttca tcttttaata tacttacttt ataatgtgca
      841 aatgactttt tgtcattttt cacaaaagta gtaaatgcgt cgttgccata cttaccaatg
      901 tattcatccg gatccatgcc agatggcaat tgtataacaa atacatttag cccttgctgt
      961 aacaaatgtt gacctgtttt aagtgttgct tcactacccg caaaatcccc atcaaacatt
     1021 aatgttatat ttgatgttaa ctttcgtata aaggtgatat gttcatctga caactgtgta
     1081 cccattgttg caacaacgtt tttcaagcca gcagtatcag attttataac atccataaaa
     1141 ccttctagta atacaatttc atctaatttt ctaattgatt tacgtgcttt atctaagtta
     1201 tataacaact ttcttttttg aaagataggc gtttcaggac tatttaagta ttttggttct
     1261 tgaccggtat atgttcgacc tgaatatcca acaattcttc cttgcgcatt tttcaaagga
     1321 aacataattc gatttcgaaa tctatcgtaa taactgaaat tttcttcgtt acgtgataat
     1381 aatccggctt catatgctaa ttcaatatcg taaccctttt tttgaagaaa atcatgacaa
     1441 aaatgtgagc tgtcgggtgc aaagccaatg cctcgctctt taataagcgc atctgtaaaa
     1501 ccacgttctt gtaagtatgt taatgcttgt tcgccttcga ctgtctttgt taaagcgtaa
     1561 taataaaatt cttgtattaa ctcatgcatt tcaatcattt gtaaatcatc agaagcaatt
     1621 tgaacatttg agttagattg tgttgcctca atatctacag caacattaac tctatcacct
     1681 aattctttaa ccgcttcaac aaatgatatg tctttaattt cttgagtaaa ttgaaaaaca
     1741 ttgccacctt ttttacaacc aaaacaatga caaatttgtt tatcttcaga aactgtaaat
     1801 gaaggtgtct tttcatcatg aaaaggacac aaacctatat aattgcgtcc tctcttttct
     1861 aattttacat attcacttac caagtctaaa atgtcggttt tatcttttat ttcattaatg
     1921 atcgattgat ctattcgcaa attaaatcac ctattaagca ttagttatac tattatacct
     1981 aattttcgac aaaaatgaaa tcatttcgat ttattttgtt caatataatg gattatatcg
     2041 tttgctgttt cttcgattgc tttttgagaa acatcaatga caggacatcc aatttcactt
     2101 acgatttctt caaagtaatt caattcttct tgaattcgtg cttctgttgc atatcgagct
     2161 gtgtcaccta gtcctaattg ttttagtcgc tcttttctaa tgcgatttaa tttttcttca
     2221 cttattttaa gtgcgataca tttctttgga tcaatatcat ataagccatc tggcggtgtc
     2281 acttctggta caatcggtac attcataact ttgtaactct tatgcgctaa atactgagat
     2341 aatggtgtct ttgaagttct cgaaatacca agtaaaacaa tatcagcttt aggtaatcct
     2401 ttaggatctt taccatcatc atatttaact gcaaactcta tcgcatcaat tttcttgaaa
     2461 tatgcatcat ctaatctatg aacgatacct ggctcattat aaggtttttc ttcaaccgaa
     2521 gctgataata aatccattaa tggccccatg atatcgacag acttcaattg gaattctgct
     2581 actttctcac tcatatattg cttcatttca ggtttaataa gtgtataaac aatgatagca
     2641 tttgtatctt ttgcaacttg aatcacttca tcaacatctt caaaagattc aatatatgga
     2701 tatcttaata attcattttt acattgctta ggattgaatt gtgaaatacc tgccctagca
     2761 actaactctg ccgtttcacc tatagaatct gaagctacga taattttaat tttttccatt
     2821 acttctcacc tattctttat ataatgctac taataactta gctattgttg ttttggaaat
     2881 tcttccaatt acttcatact tttgattatc tttttttctt acaattggaa tcgaatcaat
     2941 ttctttttca atcattctat ctgctgcgta tatgactaat tcgctttcct ctaaataagt
     3001 gacattaggc atacgtgtca tatttacact gataggtact gtatgaatat ctgctccaat
     3061 cattgaagct cttaataaat cttttcttga acacacacca acaaaatcgt tatcttcatt
     3121 aataataaat aatgtactta catcttctaa aaaaattgta caaatagcgt cataaactgt
     3181 tgtattctct cttagcacaa caggttgaga catatagtcc ttaacctcaa attgtcgaag
     3241 tttttcatta aaaaatttac cttttgattt acctgaataa taatatccaa ctcggggacg
     3301 cgcttctaaa aaacctgaca ttgttaatat cgctaaatct ggtctaagcg ttgctcttgt
     3361 taaattcaac ttatctgcta tttgttcacc agtaatgggt cctttagttt taacaatttc
     3421 gatgattcgt tcttgtcttt gactgagttc tataggtctt cacccctttt ttattcactt
     3481 attattatac cgatatttct ttcatgtcac aaacacatta attttacttg cctttaaata
     3541 atctatcaat tagaataaac gtacagcgag ttaaggatag tgtaagctta acaataagat
     3601 tggcgcaacg aatcatttta aaataaaagc gagtgactac actaatttgg gtggaaccgc
     3661 gggttaaata cgtaacttat tttgtattat atacaattta aaatattaac tcgtcccatg
     3721 gaagtaaagc atatttacta tgctgttatt ttccatgggg cgttttcatg tatgaggaga
     3781 ggtaattatg gcaaaagata tggatacaat tgtttcatta gcaaaacaca gaggttttgt
     3841 gttccctggt agtgatattt acggtggttt atcaaacaca tgggattatg gtcctttagg
     3901 tgttgaatta aagaataatg ttaaaaaagc ttggtggcaa aaattcatta cacaatcacc
     3961 gtttaacgtt ggtatcgatg ctgcaatctt aatgaatcca aaagtatggg aagcttcagg
     4021 acacttaaac aacttcaacg acccaatgat tgataataaa gatagtaaaa ttcgatatcg
     4081 cgctgataaa ttaattgaag attatatgca ggatgttaaa ggtgatgaaa acttcattgc
     4141 cgatggttta agttttgaac aaatgaaaaa aattattgac gatgaaggta ttgtttgtcc
     4201 tgtaagtaaa actgctaact ggactgaaat tcgccaattc aatttaatgt ttaaaacatt
     4261 ccaaggtgta actgaagatt ctacaaatga aattttctta cgtcctgaaa cagcacaagg
     4321 tatttttgta aactataaaa acgtgcaacg ttcaatgcgt aaaaaattac catttggtat
     4381 cggtcaaatt ggtaaatcat tccgtaatga aatcactcca ggtaacttca ttttcagaac
     4441 aagagaattt gaacaaatgg aacttgaatt cttctgtaaa cctggagaag aaatcgaatg
     4501 gcaaaattat tggaaaactt ttgcaagtga ctggttaaca agcttaaata tgagcagtga
     4561 aaatatgcgt ttacgtgatc atgatgaaga tgaattatct cattactcaa atgcaacaac
     4621 tgatattgaa tataaattcc catttggttg gggtgagtta tggggtatcg caagtcgtac
     4681 agacttcgac ttacgtaaac atgctgaaca ctctggtgaa gatttcagat accatgatcc
     4741 agaaacgaat gaaaaatata ttccatattg tatcgagcca tcacttggtg cagatcgtgt
     4801 aacattagct ttcttatgtg atgcatatga tgaagaaggc gttgaaggta gtaaagatgc
     4861 acgtacagtt ttacacttcc atcctgcatt agcaccatat aaagcagcga ttttaccttt
     4921 aagtaagaaa ttatctggcg aagcgattaa gatttttgag caattaagtt ctaaattctc
     4981 aatcgatttc gatgaatcac aatctatcgg taaaagatac cgtcgtcaag atgaaatcgg
     5041 tacaccttat tgtgtaacat tcgactttga ttcattagaa gataatcaag ttacagtacg
     5101 tgacagagat tcaatggaac aagttcgtat gccaatctca gagttagaag ctttcttaac
     5161 tgaaaaaaca aaattctaat taaaaagact ctccaccata tgtggtggct atataattta
     5221 taaaaagaga tactggttag taaaattgcc agtatctctt ttctattcga aaaaggtatt
     5281 caaataaaca catctatgtg gctacttgaa taccttttat tattttatgt tattgttcca
     5341 atctttttaa ttggttgatt agtttctgac ttttaaaaaa catacctgca tattcacgat
     5401 ataacattaa aatgatatct gacatttcat caataatttc ttgatggata ttcaatgaat
     5461 tcattttatc tattggtaat ttttgtaata catctaataa atatagtgtt ttattcgata
     5521 atataactgc atgtacatct ttagaagcct cttgccttga aatcgcaccg tcaaacttaa
     5581 aactataacc tattaaatct gcttgtgtgt cattaccact cacagcacag cgattaaatg
     5641 atgcagtaaa accaaatcgt ttcatacact ttaacataac tacgactgac attaactgtg
     5701 cagatgtacc tgattctatt ttttcaagaa caaattgtaa taattgatag ttatatggtg
     5761 caatgtcacc ttcatccatt gagcgctcaa tagtttcagc tgccagagag gcataactgc
     5821 ttacgtaaag gtccatttgt aatttataat gttgactaat aacatctaca gaatttaacg
     5881 ttcccatacc tcgccactga ttgtaaataa acaaaccata aacaaacaat tgcgtttgcg
     5941 cttgtaaacc cgtcttaact tttttagcac gccttgccat aagtggtact tttgcaccat
     6001 gctcatttaa aatcgtgata attttatcag attcaccata atcaactgct ttgatgataa
     6061 tccctttttg gcgcattaac aattatcttc accactttta agattaatct tggtcttcaa
     6121 cataaccaat ttggcgaata aagttaactt tgtttcgcca gtctctttga actttgaccc
     6181 ataattctaa gtaaacttta gagcctagaa gcatttctat atcacgtctc gcacgttttc
     6241 ctacttcttt taacttttta ccgccttttc caatgacaat tcctttttgc gaatctcttt
     6301 caacatatat agttgcttcg atatgaacgc gatcttcgct ttctttaacc atacggtcca
     6361 cattaacacc aatcgcatga gggatttctt cacttgtaag atgaaggatt ttttcacgaa
     6421 tgatttcacc cactacaaat tgttcaggat ggtctgaaat ttgatcatct ggataatatt
     6481 taggtccttc gggtaaatac gtctttaaaa catcaataaa atgatcgaca tttagccctt
     6541 ctaatgctga aataggtaca atctctgtaa agtccatata actttgatat tcttcaatct
     6601 ttggcattaa ttcatctgga tgcactaaat ctattttatt taatactaaa aatactggtg
     6661 tcttaacatt tttcaacatt tctataatat attcatcgcc tcgtccaatt tcctcattgg
     6721 cattaaccat aaacatgatt gcatctatct cagataatgt atttttagcg actttcatca
     6781 tatagtcacc taatttgtgt ttaggtttat gaatacctgg cgtatcaatg aatataattt
     6841 gcgcgtcatc tcttgtcata acaccttgaa ttttatttct agttgtttga gctttatcgg
     6901 acatgattgc tattttatgg ccgatcactc tattaacaaa tgttgacttt cctacatttg
     6961 gtctacctat aattgaaaca aatcctgatt tatgttctgt catttattct aaatcctttc
     7021 ctgaaaatcc aaatggtagt aactctgcga ctgtcatcat aaccatatct cctttatgat
     7081 ttgtcatata cacaggcata tcatcatcac ataattcctt caaaacttga cgacatgcac
     7141 cacaaggtga tgacggttta tctgcatcta cggttacagt tattgattca aaatcacctg
     7201 gtctgtatcc ttgagaaatt gccgatacca aactagctcg ttcagcacat atcgataatg
     7261 gataagaagc attttctaca ttggtaccat aaaaagttct accgtctttc gtttttaaat
     7321 aagcccctac tttaaattga ctgtatggcg aatatgattc ttgttgtgct tttctaactt
     7381 cttgaaaata atgaggttga taactcatat atgcctccct aaaataacgc tataaaatgt
     7441 ggtaaaaata ctattaaacc tataataaat gctaatattg aaactataag tacactaaaa
     7501 gccgcaatat ctttagcgta tttagctaaa tcatgatatt caacggtcac taaatcgaca
     7561 acatattcaa tagcagtgtt taaagcttca acagtgagaa ctaatgcaat agcaatgagt
     7621 ataaatatcc actcaatccg attaatattt agtacgagac caaagacaat agcaacaatc
     7681 attgcaaaca catgtaaaag aaatttatag tctttttgaa ttaagatttt cagcccatca
     7741 agtgcatatt taaacctttt cataattagt ctcgtgttaa tccatatgcg tttaatattg
     7801 tatcttgtcg accaaacatt tccttttcat ccgcttcagt catatgatca taacctaata
     7861 gatgcaaaaa tccatgtaat gctaaaaatc ctaattctcg ttcaaaagaa tgtccgtaat
     7921 tgtttgcttg ttcttgcgct acatccgtac agataattat atcccctaaa acacgtggta
     7981 tatcaagatc actaaaatca atctctggct catcttcttc taaagcaaat gagattacat
     8041 ctgtaacttt atctttatct ctatatgttc gattaatttc ttgtatttct tgtttatcta
     8101 caaatgtaac agaaagctca gcatcgtctt ctatatgctc ttctttttta gcaaattcta
     8161 ataaatcttc aatttgttta taccaagcat ctttaactaa gcctgtgtga tcgctaaaat
     8221 ctatcgtaaa catttaattc tctccttcat aatgttcaat gatcttactt accaatggat
     8281 gtctcactac atcgctctga tctaatttca atatacttat acctttaacg ttgtgtaacc
     8341 tactgaccgc ttctttaagt ccacttttaa cacctttagg taaatcgatt tgagtttggt
     8401 caccagtaac taccattttt gagccaaaac ctagtcttgt taaaaacatt ttcatttgcg
     8461 catgtgtcgt attctgcgcc tcatcaagaa ttacaaatgc atcttctaat gttcgtccgc
     8521 gcatatatgc aagtggcgct atttcgataa tgcctctttc aataaatcgc tctgtttgtt
     8581 cacgcccaag aacagtatag agaccatcat ataaaggtct taaatatgga tctacctttt
     8641 ctttcaaatc tcctggtaaa aatccaagtg actctcctgc ttcaacagca ggtcttgtta
     8701 atacaatacg tttaacagca cctttacgga gttgctttgc cgcataaact acagctaaga
     8761 atgtcttacc tgtaccagca ggacctatac caaatactaa atcattattt ttcatggcat
     8821 taacatatat acgttgcccc atcgttttcg cacgaatcgt tttaccaaat gcatctttag
     8881 ttatctcttc atcatataaa tctaacagat gttgaattgt gttattatgc gccattttaa
     8941 tagctgcttc aacatcttta attgtaatat tattacctaa atcaataacc ttcagcaaat
     9001 tgattaatac tgattccgct ttttctacgt tttctatttt tgtaccttta acggcaactt
     9061 cttgtcctct tgcatggatg acaacatcga aactctcttc aattgctttt aaatgttcat
     9121 cattatttcc aattaaagct tgagattggt tcatatcgtc tatttgtata attccaggca
     9181 tacacgcgct ccttttcata tatcagttat attcattcta tgatgcttta atatctactt
     9241 aattatatca tgcaattgat tgatttaaac atctttgcat tgacttactc atttttcttt
     9301 aatttaaaat aatcatttat acttttca
//
LOCUS       DAKPJH010000099         9070 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.099, whole genome shotgun sequence.
ACCESSION   DAKPJH010000099 DAKPJH010000000
VERSION     DAKPJH010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9070
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.099"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            105..1559
                     /locus_tag="OY092_002101"
     CDS             105..1559
                     /locus_tag="OY092_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1077028.1"
                     /translation="MEDNKMNRSLNSRHISMIAIGGAIGTGLFVATGNIISQAGPGGA
                     ILAYLVIGVMLYFLMSSIGELATFYPVSGSFSSYSTRFIDSSLGFTMGWLYWALWSLV
                     TSVDVIVASNVLYFWDTFKFFHPITWSLIFITILLLLNIFSVKSFGETEFWLSLIKVL
                     TIIVFVIFGFLMIFGILGGHAYGFENYTKGQAPFVGGISGFLGVLLVAGFSVGGTEVV
                     AVTAGESDDPKKSMPKAIKQVFWRILLFYVLSIAVIGAIIPYTDPSLLRASSSISQSP
                     FTIVFDRVGIAFAASVINAVILTSLLSAANSGVYTTGRMLYSLSSDKKAPQFLSKLNK
                     TTKLPLRALLTTYAVVVIVIIYANFNSNAVFNLLEIIGSMIIVVWGSSIWSQIRLRQA
                     IKKQGQDPNKVLPYKAPFYPLGPIIVITTLLFLLFGGSVEYILKDQWLNAFKNFLPLI
                     ILVSIYFIHKIIHKTKFVKLETINLKPHDYDNQK"
     gene            1699..1803
                     /locus_tag="OY092_002102"
     CDS             1699..1803
                     /locus_tag="OY092_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077029.1"
                     /translation="MLPFFILDILHIVYNIDNNNFSGVKFNDWTNKFI"
     gene            1778..2092
                     /locus_tag="OY092_002103"
     CDS             1778..2092
                     /locus_tag="OY092_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077030.1"
                     /translation="MIGQTNLFDDVLKQDERFVIVVQALEEKNGQLLKRTLREYPGLN
                     HKQMNDLFTHLKELFSEESFAENQSAFSITVYTNLDYTADQIYAHVKRFRGKHDWTQT
                     AK"
     gene            complement(2421..3224)
                     /locus_tag="OY092_002104"
     CDS             complement(2421..3224)
                     /locus_tag="OY092_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCX1077031.1"
                     /translation="MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLAS
                     GRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCR
                     DRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVA
                     NITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFG
                     DSMNDKSMFEVAGLAIAMGNASDELKQYADEVTLDHNENGIPHALKKLL"
     gene            complement(3282..4196)
                     /locus_tag="OY092_002105"
     CDS             complement(3282..4196)
                     /locus_tag="OY092_002105"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HCX1077032.1"
                     /translation="MSNVLELTIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWK
                     YIFHDDASKQLPTDETNFIYHVAQQVASKYSVDLPNLCIEMRSDIPLARGLGSSASAL
                     VGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLIAGYYNDVSKETSVAH
                     IDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAG
                     KLMQQDGFHEPYRQHLIAEFDEVKTIASQHNAYATVISGAGPTILIFSRKENSGELVR
                     ALNRNVVTCHSELVDINVSGVKERIVYQ"
     gene            complement(4198..5259)
                     /locus_tag="OY092_002106"
     CDS             complement(4198..5259)
                     /locus_tag="OY092_002106"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HCX1077033.1"
                     /translation="MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILG
                     IDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLK
                     AIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFR
                     IEGQKTGSFEIVQQLDGEAPDILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQ
                     AEGASPIVQNKVIKNPETIATAIRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQ
                     LMTTKEGVFSEPASNASIAGLIKLHRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNP
                     IKPLPNDKDSIIDYIKGAL"
     gene            complement(5265..6545)
                     /locus_tag="OY092_002107"
     CDS             complement(5265..6545)
                     /locus_tag="OY092_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HCX1077034.1"
                     /translation="MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILV
                     RDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVIT
                     ANKDLLAVHLKLLEDLAEENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNG
                     TSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVI
                     KLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAA
                     VEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFEL
                     KTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDN
                     QSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV"
     gene            6736..8118
                     /locus_tag="OY092_002108"
     CDS             6736..8118
                     /locus_tag="OY092_002108"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HCX1077035.1"
                     /translation="MKVSKFGGSSVSNATQIKKVLNIVNSDPERKIVIVSAPGKRHDN
                     DIKTTDLLIRLYEKVINHLDYHDKKREIIQRYDDIVKELQMDESILRTIDVTLEHYIN
                     QLKNEPKRLLDALLSCGEDFNAQLIALYNNSQGIPTKYISPKEAGIFVTDVPQEAQIL
                     DSAYSEIKKLRDYEEKLIIPGFFGVSHEGYIVTFPRGGSDITGAIISSGVRATIYENF
                     TDVSGIYKANPNIIKDPELIEEITYREMRELSYAGFSVFHDEALQPLYKDRIPVVIKN
                     TNRPQDKGTFIVHDREINAKNVISGISCDKDFTVINIKKYLMNRQVGFTRKILGVLED
                     NNISFDHMPSGIDTISIVMRSKQIQNKETKVLNEIRQKCDVDELSIEHDLAILMIVGE
                     GMNKVIGTANKITHALAESKINLKMINQGASEISMMFGIHVDDAEKAVLSTYEFCYHG
                     VALKNLCDKN"
     gene            complement(8172..8747)
                     /locus_tag="OY092_002109"
     CDS             complement(8172..8747)
                     /locus_tag="OY092_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077036.1"
                     /translation="MNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEIC
                     VERKRLSDIVKVIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYD
                     VVNDEWIFRLDPNIRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRV
                     IDALSYYQFFILKFVVGEQRIKDAIQRTINN"
BASE COUNT         2942 a         1568 c         1327 g         3233 t
ORIGIN      
        1 cagaaaattt taattttttc gctttacagc actaaatagt tattgaatag tacacttaaa
       61 aagcttacaa taatgggtat atttaaatag atgggagact aaatatggaa gataataaaa
      121 tgaaccgtag tcttaactca agacacattt ccatgattgc tataggcggt gcaattggga
      181 ctggtctatt tgtagctact ggtaatatca tttctcaagc tggtcctgga ggcgctatac
      241 tcgcttatct tgttattggt gtcatgctat atttcttaat gtcatcaatt ggagagttgg
      301 caacatttta tccagtatca ggttcattca gctcttattc aacacgcttt attgactcat
      361 ctctaggctt taccatggga tggttgtatt gggcattgtg gtcattagtt acaagtgttg
      421 atgtcatagt agcgtcaaat gtgctttatt tctgggacac atttaaattt ttccacccca
      481 ttacttggag cttaatcttt attacaattt tactattatt aaacattttt tctgtaaaat
      541 catttggaga aactgagttt tggttatcat tgattaaagt gttaacaatt atcgtattcg
      601 ttatttttgg ctttttaatg attttcggta tcttaggtgg tcatgcatat ggatttgaaa
      661 actatacaaa aggccaagca ccgtttgttg gtggtatctc tggtttctta ggcgtattat
      721 tagtcgccgg attttcggtt ggtggtacag aagtagttgc agtaactgct ggtgaatcag
      781 atgaccctaa aaagtctatg cctaaggcaa ttaaacaagt attttggcgt attcttttat
      841 tctatgtctt atcaattgca gtaattggtg caattattcc gtacacagat ccatcattat
      901 taagagcaag tagttcaata agtcaaagcc catttacaat tgtattcgat agagtaggca
      961 tagcctttgc agcatcagta atcaacgcgg ttattttaac ttcattatta tccgctgcaa
     1021 attcaggtgt ttatacaaca ggaagaatgt tgtattcctt aagttcagac aaaaaagcac
     1081 cccaattttt aagtaaatta aacaagacaa caaagttacc tttaagagca ttattaacta
     1141 cttatgcagt cgttgttatt gttattattt atgcaaactt taattcaaat gccgttttta
     1201 atttacttga aattattggt tcaatgatta tagttgtttg gggatcaagc atttggtcac
     1261 aaatacgatt gcgacaagct attaaaaaac aaggtcaaga tcctaataag gtcctaccat
     1321 ataaagcacc tttttatcca ttaggaccaa tcattgtcat cactacgcta ttattcttgc
     1381 tatttggtgg ctcagttgaa tatattttaa aagatcaatg gttaaatgct tttaaaaact
     1441 ttttaccttt aatcattcta gtgtcgattt actttattca taaaatcatt cacaaaacaa
     1501 aatttgtaaa gctagaaaca attaatttaa aaccacacga ttatgacaat caaaaataaa
     1561 taaattctca cacggcagat gctttagatt atctatagca tttgccgctt tttaatggtg
     1621 taaagcaaga tatactttaa tatctttttc tagtataaag tgtattaact agtattctgt
     1681 ttatatttta ttatgaccat gttaccattc tttattttag atattttgca tatcgtgtat
     1741 aatatagata acaataactt ttcaggggtg aaattcaatg attggacaaa caaatttatt
     1801 tgatgatgta ctaaagcaag atgagagatt tgttattgta gttcaagcat tagaagaaaa
     1861 gaacggacaa ttattaaaaa gaactttaag ggaatatccc ggtttaaacc ataaacaaat
     1921 gaatgattta tttacgcact taaaggaatt attttccgaa gaatcatttg ctgaaaacca
     1981 atcagcgttc agtattacag tttatacaaa tttagattat actgctgacc aaatatatgc
     2041 tcatgtaaaa cgcttcagag ggaagcatga ctggacacaa acagctaaat aaaatcaaga
     2101 tgcttgcagt gattttaaca attaatgtta gattgtcact gcatttttta atacattcgt
     2161 cattattcag aatgattcaa atttatttat ctaccttccg tgactaatta atacttgatt
     2221 tattaaaaaa atatacatct actatattcg tttgatatca ttactaatct aaaatatgta
     2281 tttcaaatac tctatagtat aactgaagtc attttcacat aaataaagct cccttcaaag
     2341 ctttcatttt ttcaatgtct actttgaaag gagcatttca atcttattca aatatcatgt
     2401 gttaaggctt attttaaaat ttataacaat tttttgagcg catgcggaat accattttca
     2461 ttatgatcca acgtaacttc atctgcatat tgcttaagtt catctgatgc attccccata
     2521 gcaatagcta gacctgcgac ttcaaacatt gatttatcat tcatactatc accaaaagca
     2581 atgacttgat ccaccgaata tcccaatttg tgacataacg ctttaattgc attacctttt
     2641 gaaacatctt tggccataaa ttctaagaag aatggcttac ttgtcgtagc atctacatta
     2701 tcattgaaca caccattcaa atcaattcta gcttctgtaa tattcgctac ataatctaca
     2761 cccatgacct tgggtacatc gccttgaata tatgctttga tatcatcaac acgtttcatc
     2821 ggtaaaccag ttaattccgc ttcaatattc atatattcat gttcgctgtc gtatataatt
     2881 tgaccatcat gatatgtaag aacgaaaaat cctctatctc gacaataatc tacaatttca
     2941 tcgaaatcct gcttaccaat cgatttactt acttctactt cttcattagt catgttaatc
     3001 gttttactgc cgttataact aataatatag ctatgatgtt caggtaattt taaatctcta
     3061 gcagttggaa tcataccttc agtaggtcta ccagatgcta aaacaacata ataaccttca
     3121 tcttgaattg ctgttaaata atttgcagtt tcttctgata tcacattatc tgaatttagc
     3181 aatgtgtcat ccatatctaa aacgacaact ttataatttg tcatatcgca ttaaatctcc
     3241 tctctatttc acattcaata ctattttaca atataaagtg tctattggta tacaattcgt
     3301 tctttaacac cactaacatt aatatctact aattcagaat gacatgtaac tacatttcta
     3361 tttaaagcgc gaactaattc gccactattt tctttgcgac taaatattaa aatagttggt
     3421 ccagcaccac taattacagt tgcataggca ttatgttgac tagcaattgt tttcacttca
     3481 tcaaattcag caattaaatg ctgacgatac ggttcatgaa agccatcttg ttgcatgagt
     3541 ttacctgcta attcataatt gtgctgtgct aatgcacaaa tcattgtatt actaattgca
     3601 ctacttttaa ccgcttcact atgtgttaat ttttgtggta aagcacgtct tgatgcttct
     3661 gttttaagtt cataagttgg tatcgttaca atcacatcca cgtctggtat gtcgatatgt
     3721 gcaactgacg tttctttcga gacatcatta taatatccag cgattaaacc accataaatg
     3781 gtcggcgcaa cattatcagg atgtccttcg atttcagtcg ctaattgtaa tacctcatgt
     3841 ttagacagtt ggatgtcacc aaaataattt gcgatatata tagctcctac taaagcagaa
     3901 gctgacgaac ctaaccctct tgccaatgga atatcacttc tcatttcgat acataaatta
     3961 ggcaagtcaa cactatattt agaagcaact tgttgtgcta catgataaat aaagtttgtt
     4021 tcgtcagtag gcaattgctt cgatgcatca tcatggaaaa tatatttcca ttttgtccct
     4081 gatgtttcct ttacagacag atgcaaaaat ttatctaaag ccatacctat agaatcaaag
     4141 ccaactccaa ggttggctgt tgatgcagga attgttaact ccaaaacatt cgacatgtta
     4201 taaagctcct ttaatataat cgataatgct atctttatca tttggcaatg gctttatcgg
     4261 attatctagt agtgaaatag cagtatcagg atcttttaat ccattaccag ttaaaatagc
     4321 aactactttt ttaccttgag gtaatttacc ttgtctatgc aatttaatta aacctgcaat
     4381 agaagcatta cttgctggtt cactaaagac accttcttta gttgtcatta actgatatgc
     4441 ttctagaatt tcatcatcag taacactatc tattaatcca tttgattctt taagagcatt
     4501 agtcgcctta tcccaactag caggattacc aattcgaata gcagttgcaa tcgtttcagg
     4561 atttttaatg actttatttt gaacaattgg tgatgcgcct tcagcttgga agccaaacat
     4621 tttcggcaat tgtgatcctt tagcttcatg atattcttta aagcctttcc aatatgcagt
     4681 aatattacct gcattaccta caggaatcgc taaaatatca ggtgcttcac cgtctaattg
     4741 ttgtacaatt tcaaatgagc ctgtcttttg tccttcgatt ctaaatggat tgacagagtt
     4801 tacaagctcg atttcgccac tttttgcaat ttcttttaca atttctaaag cttcatcaaa
     4861 gtttccttca atagaaacga tttctgcacc atacattact gcttgcgaca atttacctaa
     4921 tgcaatttta ccttctggta ttacgacgat agcttttaaa cctgctctcg ctgcatatgc
     4981 tgctgcagac gctgatgtat ttccagtcga agcgcatatt acaattttct taccttgctc
     5041 ttttgctttt gtcacagcca ttaccatacc gcgatcttta aatgaacctg tcggattggc
     5101 accttcatac ttcacatata aatctatacc tagtatttta gacatatttt cacaatgaat
     5161 gagtggtgta tttccctcgt tcaatgttaa ttttggtgta ttttcattta ctggtaaatg
     5221 tgctttaaac tcttctacta atccttgcca tcttctcatt ataattaaac tccttctact
     5281 gggtatactt tgtcaacttc gtatccatgc ttagtgatta attcttccgg tgatgattcc
     5341 aatccaacta taacagcggc atatgattga ttatcgtaat ttgcaactct taatgatcgg
     5401 tgaaatggta atattgcctt taactcattt tcaaaatttt caattgaacc tttgacatga
     5461 ttcactacta caaagaaatt ggatttttct ttaatattaa tttctgcatc tgaatccatc
     5521 atttcccttg ttttatctgt ctttaattca aaatgtggtg gcaatgtgtg taaatctgat
     5581 tcaaagaata atgctacatt caataaatca ctgacaacgg cactacctgt tgctaaactg
     5641 cctgctcctt ttccataaaa catcgtgtca ccaacggcat caccaatgac ataaatcgcg
     5701 ttatattcat cctctacagc tgctaattga tgctttttat caattaacgt tggttctacc
     5761 gatgcattaa ctttgccatt ttcatatatt cccttaccaa tcaatttaat tttatacccc
     5821 agttgatcgg ctacattaat atcagttaaa gttacgccac taattcctct tcgtttaacg
     5881 tcgtttaatt taatgacttg gttaaatgat aaatatgatg taatgacaac tttacgcgct
     5941 gcatctaccc cttctacatc atcagttgga tccgcttcag caaaaccaag tcttttcgct
     6001 tcatcaagtg cttcctcaaa tgtcgtttgc tctttagtca ttttagataa aataaaatta
     6061 gaggtaccat ttaaaattcc cataaatttt gaaatattat tcgcattcaa accattattt
     6121 atggcattta cgatcggaat accacctgct acactcgctt caaactttaa agctacacca
     6181 ttttcttctg ctaaatcttc taaaagttta agatgtactg ctaataaatc tttatttgcg
     6241 gtaataacat gttttttatt tttaagtgct gttcttaacc aatctacagt tggttcaatt
     6301 cctcccatga cttcaacgat aatatctaat gaatcatcat ttaaaatttc attaacatct
     6361 tcagttaaat gatattggct aatatttagc ggtctctttt tagatttatc tcgaacaaga
     6421 atatgcttta tgacaatatc tttatttaat gtatcttgaa tttgctgtcg gttctcttcg
     6481 atgattttaa caacaccaga tccgacagta cctaatccta ataatgctat atttaatttt
     6541 ttcattttat gtacctccgt ttgtgctttt gagaaaaaca aatgtattat tgaaaaacac
     6601 tagatgatag tatagtatag aattattctt tatttttgta aagttcgtaa tattcaaaat
     6661 ataaatacat aatatcattc ttacttacaa aactgaatac aattttctga ttttttagaa
     6721 aggttggcat gcactatgaa agtttctaaa ttcggtggta gctccgtctc caatgctact
     6781 caaattaaaa aggttttaaa tattgttaat tctgatccag agcgaaagat tgttatcgtt
     6841 tctgctccag gtaaaagaca tgataatgat attaaaacaa ctgatttgtt aatcagatta
     6901 tatgaaaagg tcattaatca tcttgattat catgataaaa aaagagaaat tattcagcgt
     6961 tatgatgata ttgtaaaaga attgcaaatg gatgaaagta ttttacggac gatagatgtg
     7021 actttggaac attatattaa tcaattaaaa aatgaaccaa agagactatt agatgcatta
     7081 ctttcttgtg gtgaagattt taatgcgcaa ttgatagctt tatataataa tagtcaaggt
     7141 ataccaacaa aatatatatc accgaaggaa gcgggtattt ttgttactga cgtcccacaa
     7201 gaagcacaaa tattagatag tgcttactct gaaattaaaa aattaagaga ttatgaggag
     7261 aaactaatta tcccaggatt ttttggcgta tctcatgaag gatatatagt tacatttcca
     7321 cgtggcggat cagatataac tggcgccatc atatcaagtg gtgttagagc tacaatttat
     7381 gaaaatttca ccgatgtgtc tggtatttat aaagctaatc caaatatcat caaagatcct
     7441 gaattaatcg aagaaatcac ttatcgagaa atgcgtgaat tatcttatgc tggttttagt
     7501 gttttccatg atgaagcctt acaaccactt tataaagatc gcatccctgt ggtgattaaa
     7561 aatacgaacc gccctcaaga taaaggtaca tttatagtgc atgatagaga aataaatgcg
     7621 aaaaatgtga ttagcggtat aagttgtgat aaagatttta ctgttattaa tatcaagaag
     7681 tatttaatga atagacaagt cggctttact agaaagatat taggtgtctt agaggataat
     7741 aatatttcat ttgatcatat gccttcaggt attgatacta tcagtatcgt tatgcgttca
     7801 aaacaaattc aaaataaaga aacaaaagta ttaaatgaaa ttcgtcaaaa atgtgatgtt
     7861 gatgagctaa gtattgagca tgatttagca attttaatga ttgtcggcga aggtatgaat
     7921 aaagtcatcg gtactgcaaa taaaattaca catgccttag ctgaatcaaa aattaactta
     7981 aaaatgatta accaaggtgc ttcggaaatc tcgatgatgt ttggaattca tgtagatgat
     8041 gctgaaaaag ctgtattatc tacatatgag ttttgctatc acggggttgc attaaaaaac
     8101 ttgtgtgata aaaactaata taaaagcaat tcgtaacaca tgtattcaac tgcgttatga
     8161 attgcttttt cttaattatt tattgttctc tggattgcat ccttaatacg ttgctcacct
     8221 actacaaatt ttaaaataaa aaattgatag tagcttaatg catctatgac acgtttataa
     8281 ttggaataat gatgatactg atggtgttgc attaaatcat acattagaac gatttccggt
     8341 ttaatataat ccacatccca atttaaacta tggaagtaaa tgttactctt aggtatacgt
     8401 atattcggat ccaatctaaa aatccattca tcgtttacta catcataaac gaaaatactc
     8461 attattgttg tatcatcata ttgcacataa acttttgcaa tttttgaaag tgataaatct
     8521 tctttagcta ttgcttgatc ttgcttatct atgtatagta acgcatatga ttgcggaata
     8581 actttcacaa tatcacttaa acgcttacgt tccacgcata tttcaacaat agaaggtaat
     8641 tttaattcat catttaagaa aagctgcatg gcaacttcac cgtgaaattt aaataattgc
     8701 gatgatgttt tcattaaatt gtccactaat tgttctttag cattcatttc attcactctc
     8761 aaatacacct cctaagcaag cgctttcaca aatatcatta tacattttaa aattaatgaa
     8821 ttcaatcttc aaaatactat gagtgaccta attctgtcat ttaaatgacc gttataacat
     8881 aaattcgaca taaacttgaa ttcacgaatc tttcacgtca tattcattga acatcaatat
     8941 ctgtcagttt ataatttgat tataacaatg atgaactaaa atcaactaat aaaaatgtgg
     9001 gaaattgaat aacaattaat ctttattaat tattattgta tacaaagtta aagaagtcaa
     9061 aaaggattgg
//
LOCUS       DAKPJH010000100         8883 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.100, whole genome shotgun sequence.
ACCESSION   DAKPJH010000100 DAKPJH010000000
VERSION     DAKPJH010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8883
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.100"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..143
                     /locus_tag="OY092_002110"
     CDS             <1..143
                     /locus_tag="OY092_002110"
                     /inference="COORDINATES: protein motif:HMM:TIGR01167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HCX1077037.1"
                     /translation="YKNEKLLPNTGMKQEGKNTAFSSIIIILMASMLFINKRRKKENK
                     EI"
     gene            211..282
                     /locus_tag="OY092_002111"
     CDS             211..282
                     /locus_tag="OY092_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077038.1"
                     /translation="MIKALCQIGLMHSISEVRQLNIA"
     gene            555..800
                     /locus_tag="OY092_002112"
                     /pseudo
     CDS             555..800
                     /locus_tag="OY092_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001836610.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(947..1662)
                     /locus_tag="OY092_002113"
                     /pseudo
     CDS             complement(947..1662)
                     /locus_tag="OY092_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622764.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1841..1933
                     /locus_tag="OY092_002114"
     CDS             1841..1933
                     /locus_tag="OY092_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002495832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HCX1077039.1"
                     /translation="MLIIFVHIIAPVISGCAVAYYTYWLSKRNK"
     gene            complement(2105..3076)
                     /locus_tag="OY092_002115"
     CDS             complement(2105..3076)
                     /locus_tag="OY092_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000481285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCX1077040.1"
                     /translation="MFNAIVVRKSASNVSYKIETVDESHLSKGDVLVKVVYSSINYKD
                     MLALQYKGGVIRDYPMIPGIDFAGIVESSSNDKFKEGDNVLVTGYDVGVTHTGGFSEY
                     AQVPGEWIVPIPQEMSIKESMVYGTAGFTAALSIFELEKYGMNIKSQPEILVSGATGG
                     VGSVAIQILRKIGYENITAIVRKEKQIEIAKKLGAKQVIIIEDDNKPLKKGIFDYFLD
                     TVGSNVTLYGLKRLNYQGVATVCGNVAGNSLNANILPFILRGIKLIGIDSVYVDHNIR
                     EDIWSKLANEWNIGNSLLYNEIGFEEFYKTIDQLLKGQHLGRTILKV"
     gene            3200..3619
                     /locus_tag="OY092_002116"
     CDS             3200..3619
                     /locus_tag="OY092_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCX1077041.1"
                     /translation="MELDNCINYLLSTSQNRVFKHFKSLLSPYNITPAEYGVLNCLIN
                     SNLNTPKAIGNTLNLEPSTISGILDKMSKKDLITRQTDNENRRTVLINSTNKAKDLWP
                     TLEKKAYQLNNHYFANLTNEETVVFKKILLKINETTF"
     gene            complement(3905..4480)
                     /locus_tag="OY092_002117"
     CDS             complement(3905..4480)
                     /locus_tag="OY092_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000690624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCX1077042.1"
                     /translation="MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFNDHMSGSKSKRPG
                     LDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSST
                     GQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKQDLKLLKTLYDNG
                     TPIKTIAEQWQVSRTTIYRYLNKLEDEKSDK"
     gene            4747..6792
                     /gene="copB"
                     /locus_tag="OY092_002118"
     CDS             4747..6792
                     /gene="copB"
                     /locus_tag="OY092_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopB"
                     /protein_id="HCX1077043.1"
                     /translation="MSNNKKHQNHEHHSHQEHENHTSHGNHEHHHHGNFKSKFFISLI
                     FAIPIIILSPMMGVKLPFQISFTGSDWIVLILATILFFYGGKPFLSGAKDEISTKKPG
                     MMTLVALGISVAYIYSLYAFYMNNFSGSSTHTMDFFWELATLILIMLLGHWIEMNAVG
                     NAGNALKKMAELLPNTAVKLIDNNQREEVKISDIHIDDIVEVRAGESIPTDGIIVRGE
                     TSIDESLVTGESKKVHKTHNDDVIGGSINGSGTVQVKVTATGENGYLSQVMGLVNQAQ
                     NDKSKAELLSDKVAGYLFYFAVSIGLISFIVWMLIQNNVDFALERLVTVLVIACPHAL
                     GLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYIMMDKTGTLTEGNFSVNHYESF
                     TDELNNEEILSLFASLESNSNHPLATGIVDFAKGKNISYATPQEVNNIPGVGLEGTVD
                     NKKLKIVNVSYLDKSNFDYNKEQFTNLAQQGNSISYLIHDRQVIGIIAQGDKIKESSK
                     QMVSDLLSRNITPVMLTGDNKEVAQTVAEELGISDVHAQLMPEDKESIIQDYQSNGSK
                     IMMVGDGINDAPSLIRADIGMAIGAGTDVAIESGDVILVKSNPSDIINFLSLSKNTMK
                     KMVQNLWWGAGYNVIAVPLAAGILASIGLILSPAVGAILMSLSTIIVAINAFTLKLK"
     gene            6807..8240
                     /gene="mco"
                     /locus_tag="OY092_002119"
     CDS             6807..8240
                     /gene="mco"
                     /locus_tag="OY092_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multi-copper oxidase Mco"
                     /protein_id="HCX1077044.1"
                     /translation="MYKKMFTILITLFSIMFMVPNDTFAEGKHNMMDMKENDQKRNDM
                     MDMKSHDERKNLNSSQGKNEITFPKVLDPKKDNNGYKSYTLKAQKGKTEFYKGNFSNT
                     LGYNGNLLGPTLKLKKGDKVKIKLVNNLDENTTFHWHGLEIDGKVDGGPSQVIKPGKE
                     KTIKFEVKQEAATLWYHPHPSPNTAKQVYNGLSGLLYIEDEKKNNYPSNYGKNDLPII
                     IQDKTFVSKKLNYTKTKDEDGTQGDTVLVNGKVDPKLTTKEGKIRLRLLNGSNARDLN
                     LKLSNNQSFEYIASEGGHLEKTKKLKEINLAPSARKEIVIDLSKMKEEKVNLVDNDET
                     VILPIINKEKSTNKDTTPKVDKKIKLEGMDDNVTINGKKFDPNRIDFTQKVNRKETWE
                     IENVKDKMSGMKHPFHIHGTQFKVLSVDGKKPSEDMRGKKDVISLEPGQKAKIEVVFK
                     NTGTYMFHCHILEHEDNGMMGQIKVTK"
     gene            complement(8307..>8883)
                     /locus_tag="OY092_002120"
     CDS             complement(8307..>8883)
                     /locus_tag="OY092_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077045.1"
                     /translation="LITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIGF
                     KRYANRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQIN
                     QKLSEPETKKIYSQRKIDVESVFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRK
                     IAAQRAVHYKINIKKADFHQIINRNQLFYIA"
BASE COUNT         3172 a         1358 c         1371 g         2982 t
ORIGIN      
        1 attataaaaa tgaaaagctt ctaccaaata caggtatgaa acaagaagga aaaaatacag
       61 ctttttcatc aatcataata atattgatgg catcaatgtt atttattaat aaacgtagaa
      121 aaaaagaaaa taaagaaata tagtttaaaa tagacaatag aaaaaggaaa atcattaatt
      181 attattttcc aataataatt ataaaatcaa ttgatcaagg ctctatgtca aattggactg
      241 atgcattcaa tatcggaagt taggcaacta aacattgctt aacttccttt ttactttttg
      301 gagtgtaaag tgttgaacat aataataggg ttctataata aattaagata tattattata
      361 agttaaaatg ttgaatcgtc tacacttagt taacaatatc tatttttata aaattaatca
      421 aactaagtgt agacagttca tctatatatt tatttttcgc caattgtaaa attaagttag
      481 acaaataaat aagccttctg tgctaaactc aatatgtatt tcctaccaaa gaaaacataa
      541 ggagttagta cagaatggac tatacacgtc ttaacacgga tgaacttacg ttcatagaat
      601 catattatca ccagaatctt tcagttaaag agatttcgag tagattgaaa cgttctagac
      661 agacaattta taacgtaatc aatgttttta agtcggggat gtctgccctt gaatattatc
      721 aagaatacaa acaaagaaag tctaattgtg ggaggcatag aatagttctt ccagaagaac
      781 agtctgatta tatccgagag tatgtaaagc taaagctgca actgaaacta tcaaaaatga
      841 gttaaaacgt taatttagag ataaatattt ttaggttctc catcaaatgt ggtgggtata
      901 taatttaaag aactatttta aattacaact tttagagttt ttattattag gcggccagtc
      961 cattattggg cttggttgtc ttcttttttc tcctttgtat aagctgaaaa tcatcattat
     1021 acgtgcttta aagttgttga aatttctgta accaaaagaa attcgcttga ttaattttat
     1081 cttattatta attccttcta tagcaccatt attaaatgct gggtaataaa ttgtatttct
     1141 taacatcctt tgatgttttc tataatattt aaccgctttc catacaccct tactcacaga
     1201 ctttttacta actgaattta aacgattaat aaatttaggc caattacata accttaggtc
     1261 ttttcgtaat ccttggacaa gttcgtagga gtgtcgtagt atatcgtctt ttgaaagcat
     1321 gaattctaca atgtcagatg agcgtttata agccttaaaa gatttattcc atctgtattt
     1381 actaaatatg gttttactag tatccatcaa taggactttc cagttattct taaaaattgt
     1441 ataatcaggt ccttttttat tacggtattc attcataact tgtacacgat acttattaag
     1501 ttctctattt aaatgttgaa cgatatggga tctgtcaaaa ataatagctg cattaggaaa
     1561 taggtcgcga aataatcgga catagggttc atacatgtca atagtaaccg tcttagatcc
     1621 agttacattt ttaacgcttt taaattcatc catagattaa tgaatttagg ggatgatttt
     1681 gaactgcgtt tcttcttttg tcttgatact ataaaaaaca aagttatata acataagacg
     1741 acttatcgaa agtagatatg cttgtatatt cacagatggt ataataatag agtcgcctat
     1801 ctctcaggtg tcaattgacg aagagaggag gtgcattact ttgctaatca ttttcgttca
     1861 catcatagca ccagtcatca gtggctgtgc tgttgcgtat tatacttatt ggcttagtaa
     1921 acgcaacaaa taattaatag gcgactttat aagccagcat cgaaaaaatc cccacactac
     1981 tgcaatagtg tggggattgg tgcattaatt gttaatcatt ttcgttatat aaattataac
     2041 actggttagt agagaaatgc aaaatgattg aattaatagt aaatgtatta atgaatactc
     2101 atacttatac ttttaaaata gttcttccta aatgttgtcc ttttaaaagc tgatctatcg
     2161 ttttatagaa ttcttcaaat ccaatttcat tgtatagaag tgaatttcct atattccatt
     2221 catttgctaa cttactccat atatcttcac ggatattatg atcaacatat acagaatcaa
     2281 tgccaattaa tttaatacct ctaagaataa acggtaatat attagcgtta agtgaatttc
     2341 ctgctacatt tccacataca gtagcaacac cttgataatt tagacgtttt aaaccgtata
     2401 atgttacatt actccccact gtatctagga aataatcaaa aatacctttt ttaagtggtt
     2461 tattatcatc ttcaattatt attacttgtt ttgcacctaa tttttttgcg atttctattt
     2521 gcttttcttt tcttacgata gcagtgatat tttcatatcc aattttacgt aaaatttgta
     2581 ttgcaacact gcccacacca cctgtagccc cagacactaa aatttcaggt tgtgatttga
     2641 tattcattcc atatttttct agttcaaaaa ttgataatgc tgccgtaaaa ccggctgtgc
     2701 catataccat agactcttta atagacattt cttggggaat aggaacaatc cactctccag
     2761 gcacttgtgc atattctgaa aatccacctg tatgtgtcac accgacatca taaccagtaa
     2821 ctaatacatt atcgccttct ttaaacttat cattcgaact tgattcaaca atacctgcaa
     2881 aatctatacc aggaatcata ggataatctc taattacacc gcctttatat tgtaaagcta
     2941 gcatatcctt ataatttatt gaagagtata ccacttttac taagacatca cccttcgata
     3001 aatgagattc atcaacggtt tctattttat aactaacatt tgatgcactt tttctcacta
     3061 ctatcgcatt gaacatttat tagccttctt tcacaattgt tttgtagagg tatgtttttg
     3121 ttgcaaaact attttcctac aaaacttatc atgatatgat aagcgagtca atactaatga
     3181 tttaagaggg gtttttgttg tggaattaga taattgtata aattatttgt tgagtacttc
     3241 tcagaataga gtgtttaaac attttaaaag tttattaagt ccctataata ttactccagc
     3301 agaatatggt gttttgaatt gcttgattaa tagtaatttg aatacaccta aagcgattgg
     3361 taatacttta aatttagaac cttcaacaat atctggaata ttagataaga tgtccaaaaa
     3421 ggatctaata acacgtcaaa ctgataatga aaatagaaga actgtgctaa taaacagtac
     3481 aaataaagca aaagacttat ggccaacatt agaaaagaaa gcctatcaac ttaataatca
     3541 ttacttcgct aatttaacta atgaagaaac tgtagtgttt aaaaagatat tactaaagat
     3601 aaatgaaact actttttaat ttttacgtta ttaaaaagtt gaagtgcgaa ttataatcga
     3661 gtaaatataa atgatagctt agcttaatta tatattaaag ccaactatac ttttattctc
     3721 gaaaaaccta ctatccaaat ttctaagata ctttagtctc tataataaaa atattgtaat
     3781 ataatttatg tattttttag gtacattcta atcatacaaa tgaagttgtt gaatttataa
     3841 tagcttaaac gtatgattag tgtgtatttt ttaactttta ttattgttga aagttaagtt
     3901 gtatttactt atcactcttt tcatcttcta atttattgag ataacgataa attgttgtac
     3961 gtgaaacttg ccattgttca gcaattgtct taattggcgt accattatca taaagtgttt
     4021 tgagcaattt taaatcttgt ttgtttaatt tttcgggtct tccaccatac cgtcctctag
     4081 cacgtgctgc aattctacca gctgaagaac gttctaaaat taaattacgt tcaaattctg
     4141 caaatgctgc gaataaatga aataataatt gtccggtaga acttgattta tccatcgtta
     4201 tattttcttc taaactatgg aaacttacac ctcgttcatt aagctcatta actaatgtaa
     4261 ttaaatcctc catattacgt cctagtctat ctaatctcca aacaacaata gtatctccag
     4321 accttgcaaa ttcaattgct ttatctaaac caggtctttt actttttgaa ccactcatat
     4381 gatcgttaaa tatcttttca caaccatatg catttaatcg atcttcttgt aaatttaaat
     4441 tttgtaatcc tgttgaaact cttgcataac ctattttcaa aatacaaacc tcctatatcc
     4501 atcattagtg taccataact taaatacggg tacttttatg aacatagatt ttttattggg
     4561 tttctgaaca taaaaataaa tgtaatcctc acttatttcg atataaaaaa agagtgtaca
     4621 gaaaatggtt attttctgta cactacaaaa taaaaaagtc aaatggtata tacccctatc
     4681 ccgtatatgt tacactcaaa ttgtcttatt actatcttta aaaatataaa attaggaggt
     4741 ttaattttgt cgaataacaa aaaacaccaa aatcatgagc atcatagtca tcaagaacat
     4801 gaaaatcaca ctagtcatgg taatcatgaa catcaccatc atggaaattt taaaagtaaa
     4861 ttctttattt ctttgatttt tgcgataccg attattattt tatcgcccat gatgggagtt
     4921 aaattaccgt ttcaaatttc atttacaggg tcagattgga ttgtattaat tcttgctaca
     4981 attttattct tttacggagg aaagccattt ttatcagggg ctaaagatga aatttcaact
     5041 aaaaaacctg gaatgatgac gcttgttgct ctaggtattt cagtagctta tatttatagt
     5101 ttatacgcct tttatatgaa taacttcagt ggttcatcca cacatacaat ggactttttc
     5161 tgggaattag cgactttaat tttaatcatg ttattaggtc attggattga aatgaacgca
     5221 gtaggtaatg caggcaatgc actgaagaaa atggcagaac ttttacctaa tactgcagtg
     5281 aagctgattg ataacaatca acgagaagaa gttaaaatat cagatattca tattgacgat
     5341 attgtggaag tcagagcagg cgaaagtata cccacagacg gaatcattgt tcgaggagaa
     5401 acatcaattg acgaatcatt agttactggc gaatcaaaaa aagttcataa aactcataat
     5461 gatgatgtta ttggaggttc aattaatggt tcaggtacag tacaagttaa agtgactgct
     5521 acgggtgaaa atggctacct atctcaagtt atgggtcttg ttaaccaagc tcaaaacgat
     5581 aagtcaaaag ctgaactcct ctctgataaa gtcgcaggtt atttgtttta ctttgcagta
     5641 agtattggcc tgatttcatt tatcgtatgg atgcttattc aaaacaacgt cgatttcgca
     5701 cttgaacggc tagtaaccgt attagtcatt gcttgtccac atgcattagg cttggcaata
     5761 cctttagtta cagcacgttc tacctctata ggcgcacata atggtttaat cattaaaaac
     5821 agagaatctg tagaaatcgc acaacacatt gattacatca tgatggataa aactgggaca
     5881 ctaactgaag gtaacttttc agtgaatcac tatgaaagtt ttacagacga gttaaataat
     5941 gaagaaatat tgagtctatt tgcttcatta gaaagtaatt ctaatcatcc acttgccact
     6001 ggtattgttg attttgctaa aggcaaaaat atttcatatg ctactcctca agaagttaat
     6061 aatattccag gtgtaggctt agaaggcaca gttgataata aaaaactcaa aatagtgaat
     6121 gtttcttatc tcgataaaag caattttgat tataataaag aacaatttac gaatctcgct
     6181 caacaaggga attctattag ttatctaatt catgaccgac aagttattgg tattatcgca
     6241 caaggcgata aaattaaaga aagttcaaaa caaatggttt cggatttatt atcgagaaac
     6301 attacgccag tcatgcttac aggcgataat aaagaagtgg cacaaacagt ggctgaagaa
     6361 ttaggtatta gtgatgtcca cgcgcaattg atgcccgaag ataaagaaag tattatccaa
     6421 gattatcaaa gcaatggtag caaaatcatg atggttggtg atggtatcaa tgatgcgcca
     6481 agccttatta gagcagatat tggtatggca attggcgcag ggacagatgt agctattgaa
     6541 tcgggggatg tcatactcgt taaaagtaat ccttctgata ttatcaattt tttgtccctt
     6601 tcaaaaaata cgatgaaaaa aatggttcaa aatttatggt ggggcgcagg atataacgtg
     6661 attgcagttc ctcttgcagc tggtatatta gcttctattg gtttaatatt atcacctgct
     6721 gtgggtgcaa tacttatgtc tttaagtacg atcatcgtag caattaatgc atttacatta
     6781 aaattaaaat aaaagaggta aatataatgt ataaaaaaat gttcacaatt ttaattacgt
     6841 tattttctat aatgtttatg gttcctaatg atacttttgc agaaggtaag cacaacatga
     6901 tggacatgaa agaaaatgat caaaagcgaa atgatatgat ggatatgaaa agtcatgacg
     6961 aaagaaaaaa tttgaattct tcacaaggaa aaaatgaaat aacatttccc aaagttttag
     7021 atcctaaaaa agataacaat ggttataaaa gttatacatt aaaagcgcag aaaggaaaga
     7081 cagaatttta caaaggtaat ttctctaaca ctttaggata caatggaaat ttacttgggc
     7141 caactttaaa attaaaaaaa ggagataagg ttaaaattaa gttagtcaac aacttagatg
     7201 aaaatacaac atttcattgg catgggttag aaatagatgg aaaagtggat ggaggccctt
     7261 ctcaagttat aaaaccagga aaagaaaaaa caataaaatt tgaggttaaa caagaggctg
     7321 ctacattatg gtatcatccc cacccctccc caaatacagc taaacaagtt tataatggtt
     7381 tatcagggtt attatatata gaggatgaga aaaagaataa ttatcctagc aattatggga
     7441 aaaatgattt gcctataata atccaagata aaacatttgt atctaaaaaa ttaaattata
     7501 caaaaacgaa agatgaagat ggtactcaag gtgatacagt ccttgtgaat gggaaagtag
     7561 atcctaaatt aacaacaaaa gaaggaaaaa tacgtttgag acttttaaat ggctccaatg
     7621 ctcgggattt aaatcttaag ctaagtaata atcaaagttt tgaatatatt gcttcagaag
     7681 gcggccattt agaaaagact aaaaagttaa aagaaattaa tttagctcct tcagcaagaa
     7741 aagaaatagt aatagattta tctaaaatga aagaagaaaa agtcaatctt gttgataatg
     7801 atgaaacagt aattttacca attattaaca aagaaaaaag tactaacaaa gacactactc
     7861 caaaagtaga taaaaaaatc aaattagaag gtatggacga taatgttact attaatggca
     7921 aaaaattcga tcctaacaga atagatttca cacaaaaggt aaaccgtaaa gaaacttggg
     7981 aaattgaaaa cgtcaaagat aaaatgagtg gtatgaagca cccgttccat atccacggaa
     8041 cgcaatttaa agttttatca gtggatggga agaaaccttc agaagatatg agaggcaaaa
     8101 aagacgttat atctctggaa cctggacaaa aagccaaaat agaagtggtt tttaaaaata
     8161 ctgggacata catgttccat tgtcacatac ttgagcatga agataatgga atgatgggac
     8221 aaataaaagt aacaaaataa tttatatcgt cgcgatcatt ttatcatctc caaatatttt
     8281 agggatgagg ctgggacatt aagttcttag gcaatgtaaa aaagctgatt tctattaatt
     8341 atttgatgga aatcagcttt tttgatattt attttataat gtacagctcg ttgagctgct
     8401 attttcctta tattaagtgc cattaataca aaacctagct ctcgtttaac tttatttatt
     8461 cctcgaactg acattcgagt gaaacccaaa atagccttca taaatccaaa aacagactct
     8521 acatcaattt ttctttgact atagattttt ttcgtttctg gttcagaaag cttttgatta
     8581 atttgggctt taaagtattc ccaattataa ttcttcatga ttttcttatt ggatttcgaa
     8641 tttggcttca tgcattgttg cctcaaagaa catgctgaac agtcatcgca ttcatatagt
     8701 ttgaagtcac gtttaaaacc atatctatca ttacggtttg catatctttt aaaacctatt
     8761 cttttgttat taggacatat aaattcatca ttaagttcgt catatttcca gttttgagtg
     8821 ttaaaaatgt cacttttaaa ctttctcgtt ttatctttaa taaacatacc atacgtaata
     8881 agt
//
LOCUS       DAKPJH010000101         8853 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.101, whole genome shotgun sequence.
ACCESSION   DAKPJH010000101 DAKPJH010000000
VERSION     DAKPJH010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8853
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.101"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(215..1441)
                     /gene="ftsW"
                     /locus_tag="OY092_002121"
     CDS             complement(215..1441)
                     /gene="ftsW"
                     /locus_tag="OY092_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HCX1077046.1"
                     /translation="MKNFRSILRYIGKTSKFIDYPLLVTYIVLSLIGLVMVYSASMVP
                     ATKGTLTGGIDVPGTYFYNRQLAYVIMSFMIVFFIAFLMNVKLLSNIKVQKGMIITIV
                     SLLLLTLVIGKDINGSKSWINLGFMNLQASELLKIAIILYIPFMISKKMPRVLSKPKL
                     ILSPIVLALGCTFLVFLQKDVGQTLLILIILVAIIFYSGIGVNKVLRFGIPAVLGFLV
                     VFVIALMAGWLPSYLTARFSTLTDPFQFESGTGYHISNSLLAIGNGGVFGKGLGNSAM
                     KLGYLPEPHTDFIFAIICEELGLIGGLLVITLEFFIVYRAFQFANKTSSYFYKLVCVG
                     IATYFGSQTFVNIGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLIVGKQIKVDQ
                     QRKKQQQKVDIRRQFN"
     gene            complement(1755..2030)
                     /locus_tag="OY092_002122"
     CDS             complement(1755..2030)
                     /locus_tag="OY092_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HCX1077047.1"
                     /translation="MAKQTTMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEV
                     LDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV"
     gene            2171..2653
                     /locus_tag="OY092_002123"
     CDS             2171..2653
                     /locus_tag="OY092_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077048.1"
                     /translation="MIQIKGAVKFPITLDSTTWIFDDRKVSIEDLEKGVFDGSKPIDF
                     EDNHEWNRAILEGQTNPPTLNSEIKYKKRAMLEGSFVINMTPFFKHSEPHDSATTIRL
                     SNEHDHLDIPIDLLPYLFFQFAKDGKRLYSDNGVDSFIYNQEDGYSYRINHVTHIEVI
                     "
     gene            2655..2822
                     /locus_tag="OY092_002124"
     CDS             2655..2822
                     /locus_tag="OY092_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaI family protein"
                     /protein_id="HCX1077049.1"
                     /translation="MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDT
                     PKQRAQHYPLD"
     gene            complement(2962..4809)
                     /gene="typA"
                     /locus_tag="OY092_002125"
     CDS             complement(2962..4809)
                     /gene="typA"
                     /locus_tag="OY092_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HCX1077050.1"
                     /translation="MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDER
                     AMDSNDIERERGITILAKNTAVDYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEGVVDEVLDLFIELEANDEQ
                     LEFPVVYASAVNGTASLDPEKQDDNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYN
                     DYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGYFGLKRLEIEEAQAGDL
                     IAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQI
                     QERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVII
                     KEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARG
                     MIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLE
                     DRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRIL
                     TLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE"
     gene            4911..5102
                     /locus_tag="OY092_002126"
     CDS             4911..5102
                     /locus_tag="OY092_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaF family protein"
                     /protein_id="HCX1077051.1"
                     /translation="MKQKKSKNIFWVFSILAVIFLVLFSFAVGASNVPMMILTFILLV
                     ATFGIGFTTKKKYRENDWL"
     gene            complement(5256..6083)
                     /locus_tag="OY092_002127"
     CDS             complement(5256..6083)
                     /locus_tag="OY092_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HCX1077052.1"
                     /translation="MALYGFAQGLIQEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKA
                     TEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISI
                     GIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLT
                     KPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYE
                     VNGQASNLLGEPLTIGGPNSVLVGNRGVHREILDVYLEPHRDALIQLHERRFKRKSK"
     gene            6240..6854
                     /locus_tag="OY092_002128"
     CDS             6240..6854
                     /locus_tag="OY092_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YktB family protein"
                     /protein_id="HCX1077053.1"
                     /translation="MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLHELGEYFSDF
                     FTSQTGETFYPHVAKHARRSVNPPKDTWVAFATSKRGYKMLPHFQIGMFEDQLFVMFG
                     IMHEAKDKATRAKVFERKFKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLKEAIQRA
                     INVKKGEFFIARAITPQDKRLKSDKAFIAFLEETFDQFLPFYSA"
     gene            7038..8390
                     /locus_tag="OY092_002129"
     CDS             7038..8390
                     /locus_tag="OY092_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HCX1077054.1"
                     /translation="MNNKRHSTNEQLSLDEINNTIKFDHRSSNKQKFLSFLGPGLLVA
                     VGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRH
                     YLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFNIPLIVGALITVLDVFLLLFI
                     MKYGFRKIEAIVGTLIFTVLFIFIFEVYISSPQLNAVLNGFIPHSEIITNNGILYIAL
                     GIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLL
                     VLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITG
                     TLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFL
                     SIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVYLIVQTFQELQG
                     "
     gene            complement(8472..>8853)
                     /locus_tag="OY092_002130"
     CDS             complement(8472..>8853)
                     /locus_tag="OY092_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HCX1077055.1"
                     /translation="NSISIIYLLVMGLSYFSLKSGNASQREELAKQLSQNGGNVSLDM
                     LQTTIGALAIILLISTLYGIFATICIKGRRKLSIILFVIAIIVSLMALNLIAIVLWII
                     VMIMLISKKESKETTHKDDEYIYH"
BASE COUNT         2988 a         1553 c         1280 g         3032 t
ORIGIN      
        1 tttagttata attatacgtt gtttcgttta taaaatttga taatcatgag taatctcgta
       61 atatcaaaac aaaaaggaag ttaagcgttg tttggttgcc taacttccgt tatttaactc
      121 atcagtccaa tttaacaaag agtatataaa tagccaatgt ttagcatcga tttatgacag
      181 aagtcatctc gtactaaata ttggctagta ttttttaatt aaattgtctt cttatatcaa
      241 ctttttgttg ttgtttcttt cgttgctggt ctactttgat ttgtttacct acaatcagaa
      301 gtaatcccat agcaatactt aaactaatca ttgatgatcc accaaaactg ataaatggca
      361 atggcacacc agttaatgga attgttgccg aaataccgcc aatgtttaca aacgtttggc
      421 ttccaaagta tgtggcaatc ccaacacaca caagtttata aaaatatgat gatgttttat
      481 ttgcaaactg aaaggcacga tatacaataa agaactctaa agtaataact agcaatcctc
      541 cgattaaacc taattcttcg caaataattg caaaaataaa atctgtatgt ggttctggta
      601 aatagcccaa tttcattgca ctatttccta atccttttcc aaatacgcca ccgttaccta
      661 tcgcaagcaa tgaattggaa atatggtatc cagttcctga ttcgaattgg aatggatctg
      721 ttagcgtact aaatctggct gttaaataac ttggtaacca accagccatt aatgcaatga
      781 caaatactac taagaatcct agcactgctg gtataccaaa tcttaggact ttgtttaccc
      841 caattcctga ataaaaaatg atcgcaacta aaataattaa tattagtaat gtttgcccta
      901 cgtctttttg taggaaaact aaaaacgtac aacctaatgc taatacaata ggacttaaaa
      961 ttaattttgg tttacttaat actctaggca tttttttact gatcataaat gggatatata
     1021 atatgattgc aatttttaat aactcagatg cctgtaagtt cataaatcct aagtttatcc
     1081 aacttttaga accattaata tctttaccga ttactaacgt cagtaataat agcgagacga
     1141 tagttataat catacctttt tgcactttaa tattactcag taatttaaca ttcattaaaa
     1201 atgcaataaa aaatacaatc ataaaactca ttatgacata tgctaattgt cggttgtaaa
     1261 aatacgttcc tggaacatcg ataccaccag tcaatgtgcc tttagttgct ggaaccatac
     1321 tggcactata taccatcact aatccaatta aactcaatac aatatatgta actaataacg
     1381 ggtaatcaat aaactttgag gttttaccaa tataccgtaa aatacttcta aaattcttca
     1441 tatattcagt catccaattc tacaatttat acttcaaatg atttcgtttt atactttaat
     1501 tttaaaaatc catgttactt attatataca tgacatcgtc ataatcacaa atattaacag
     1561 gtatcttgag gtaatttata gaatatttgt ttacttaata tcgtgaattg ctaaaaccca
     1621 ataaaagtga ctgacatgtc atcaagaaga caacataaca gccactttaa tcagtaatta
     1681 aactataaat ataaaatcgg cgcagctcaa ttgtcgatat ctcacgccgt tttaatatgc
     1741 ttatatatta aaccttaaac aagtgtaaaa gcttcatgta attttgaaag ttctttctca
     1801 agacgtaaca ttatttgttt gccatcttcg cggtcaacta aacctaattt aacagcaaaa
     1861 tcaacttctt tttgaagtcc aaacatttgt gtatctagta cttcttcata taatgggcat
     1921 gaaggtaatg ttaaattatc tagttgaact ttaatcagat gtaagatttc atcagcatct
     1981 ttagtcaatt gtttcaaagc tgcatttttc attgttgttt gtttcgccat gacacgctcc
     2041 ccctctatat aaattctcaa gtcttactaa aagtttatct tactaaatat taaaaagcaa
     2101 gtagatttaa aatgtgtcgt tagcaatttg tgttaaaata atgctatata cattgatagg
     2161 gagtgggaaa atgatacaaa ttaaaggagc cgtaaagttt cctataacat tagatagtac
     2221 gacttggatt ttcgatgata gaaaagttag catcgaagat ttagaaaaag gtgtatttga
     2281 tggttcaaaa ccaatcgact ttgaagataa tcatgaatgg aatcgtgcta tcctagaagg
     2341 acaaactaat ccgcctactt taaattcaga aataaaatat aaaaaacgtg ccatgttaga
     2401 aggttcattt gtcattaata tgacaccatt tttcaaacat tccgaaccac atgactctgc
     2461 aactactatt cgattatcaa atgagcatga tcatttagat ataccgatag atctattacc
     2521 ctatttattt ttccaatttg caaaagacgg taaacgactt tacagcgata atggtgtaga
     2581 tagttttatt tacaatcaag aagatggtta ttcatatcga atcaaccatg taactcatat
     2641 tgaggtgatt taatttgaga caagtgcaat gcattatctg tgatgcaaaa gtatttatag
     2701 atgagcgcac aactgagtct aaacgactta aaaacaatcc tattcgaaca tttatgtgcg
     2761 atgattgtaa aagtcgatta gacacaccta aacaacgtgc gcaacactat ccgctcgatt
     2821 aatatctgaa taaacaagtt agaaatttga aaatgtgaaa gtaacaggaa ataatagcat
     2881 ttaaacactt tttcaaatat tatatgccaa aagagaagct aagcaacttt cattgctcag
     2941 cttctctttt attatgttaa attattcgtt ttcttgcatc atttgtttga tacgctttgc
     3001 ttctttttca cgaacatttt tgtttaaaat tttctttctt aaacgtatgc tttctggtgt
     3061 aacctcaaca agttcatcat cattaatgaa ttgtaacgct tcttccaatg ttagaatacg
     3121 cggtctattc attgtttgtg tttggtcttt cgttgcagaa cgtacgttag tttgatgttt
     3181 tgttttagtg atgttaacag ttaaatcatt ttcacgatta tgttcaccaa caatcatacc
     3241 ttcataaact tcagtaccag gttccatgaa gtttacacct ctatcttcaa gtcctaaaat
     3301 ggcataagta cttgcagaac cttgatccat tgaaattaat gcaccattac gacgaccgcc
     3361 aatttgtgct ttaatacgtg gtctaaattc ttcaaatgta tggttaataa taccgtaacc
     3421 tcttgtcatt gacataaatt cagtcgtata accaatcata ccacgagccg gtacattaaa
     3481 gattaaacgt gtaagtccat tatcagttgt agtcatatca accatttcac ctttacgtgc
     3541 acctaatgat tcaataaccg cacctgcatt ttcttgtggc acttcacatt gcacacgttc
     3601 aaatggttca cacattacac catcaatttc tttaataatt acttgtggtt ttgaaacttg
     3661 taattcataa ccttcacgac gcatattttc aataaggatt gataaatgca attcacctcg
     3721 accagcaact acccatgtat ctggagaatc tgtgttagaa actttcaaag atacatctgt
     3781 ttctaattgt tgatttaaac gttcttgaat ttgacgcgct gttacaaagt caccttcacg
     3841 gccagcaaat ggtgaattgt taactttaaa tgtcatttca agagtaggct catcaatacg
     3901 tagaactggc aatgcttctt gatggtcatg tggtgttaca gtttcaccaa cattaatgtc
     3961 ttccatacct gaaacagcaa ttaaatctcc agcttgtgct tcttcaattt ctaaacgttt
     4021 taatccaaag taaccaaaga ttttagttac acggaagttt ttcactgtac cgtctaattt
     4081 aattagtgat acattatctc cgacacgcat tttacctctg aatacacgac caataccaat
     4141 acgtccaaca taatcattgt agtccaacaa tgctacttgg aattgtaatg gctcatcact
     4201 gttatcaatt ggagctggta cataatcaat aattgtttca tataatgatt gtaaattatc
     4261 atcttgtttt tcaggatcta agctagctgt accatttact gctgaagcat aaacaacagg
     4321 gaattctaat tgttcatcgt ttgcttctaa ttcaataaat aaatctaaaa cttcatctac
     4381 aacaccctct ggacgtgctg atggtttatc aattttatta acaacaacaa caggtttcag
     4441 gttttgttct agcgcttttt taagtacaaa acgtgtttga ggcattgtac cttcatacgc
     4501 atctactact aagacaaccc catcaaccat tttcataata cgttctactt ctccaccaaa
     4561 gtctgcatgt cctggtgtat ccaaaatatt aatacgtgta cctttataat caacagccgt
     4621 atttttggct agaatcgtaa ttccacgctc tctttcaata tcgttagagt ccattgcacg
     4681 ttcatcgaca tgttcatttt ctctgaatat accagattgt tttaacaact catctactaa
     4741 agttgtttta ccatggtcaa cgtgagcaat aattgctata ttgcggacat cttctctttt
     4801 attagtcata taaatagttt ccttctttct taagtaaaat cccactttta attacaactt
     4861 ttttattata tcatataatt gagaaaagat aagcaaaagg tggggatagg atgaaacaaa
     4921 aaaaatctaa aaatatcttt tgggtatttt ctatattagc tgttattttc ttagtattat
     4981 ttagttttgc tgttggtgca tcaaatgtac caatgatgat tttaacattt atattactcg
     5041 ttgcaacctt tggaattgga tttactacaa agaaaaaata tcgagaaaac gattggctat
     5101 aagttatatc gacaataaca cgcgttgatt aaagaccacg catgttcatg atgaacattt
     5161 aaatggtttt atattggcgc gtgtttttat tatttaagat ataaaagcgt aatatgttac
     5221 ctaattgtta ggactacata ttacgctttt ggtaattatt ttgattttct tttaaatcgt
     5281 cgttcatgta attgtattaa cgcatcgcga tgtggctcta aatatacatc gaggatctct
     5341 ctatgaacac cacgattacc aactaaaact gagtttggac caccaattgt tagcggttca
     5401 cccaataaat ttgaagcttg tccatttact tcatataaaa taaccaatcc tccagcaaaa
     5461 tcccacggtt ggagtctagg tgtcatatat gcttctaaat taccggtagc aacagaaaca
     5521 atttcaagcg ctgcactacc atatgccctt gcacttctag aatcattaac aatttcttta
     5581 aagatttctc ctaaaattgg tttagttaac cagttcggat tgatcccaat aatgctttgt
     5641 cttagattag aatcattcaa tggtttcaag ggttggctac ctcgatatgc accttcccct
     5701 actttagcat gatataagac atcagccata acatcatata caaaacctgc ataaggttta
     5761 ccatcgatat aaataccaat tgaaatcgcg aaattttctt gttgatgaac aaaattcaat
     5821 gtaccgtcta ttgggtcaac aacccatacc gtacctttgg aagtatcgat gtcatgacca
     5881 tgcccttctt cacctaatac ttgatgattg ggatatgttt ctaaaattgt atcaaaaata
     5941 aaatcttctg ttgctttatc tacatttgta acaaggtcat tcggatttga ctttgtttca
     6001 attgttaaat tttgctccat caattgttta attctaattc ctgcttcttg aataagtcct
     6061 tgggcaaatc cataaagtgc cataacatca tctcctaaca tctttattat acatcaacat
     6121 tttataaaaa taacttctta tgataaaaat gaaaatacta attttaatga gagcgtctta
     6181 agccgcaatt gataaaacat atgctacaat atttttaaac actatacagg aggtactcta
     6241 tgacaaaata tacatttaaa cctaaagatt tcaaagcgtt caacgtagaa ggtttagacg
     6301 cacgaatgga agctttaaac gaatacatac gaccacaact ccatgaatta ggagaatatt
     6361 ttagtgactt ctttacaagt caaactggtg aaacatttta tcctcacgta gcaaaacatg
     6421 ctagaagaag tgtgaatcct cctaaagata catgggttgc ttttgctaca agcaaacgag
     6481 gctataaaat gttacctcat ttccaaattg gtatgtttga agatcaactg tttgttatgt
     6541 ttggaatcat gcatgaagca aaagataaag caacacgtgc aaaagttttt gaaagaaaat
     6601 ttaaagctat tcaacaatta cctgatgatt atcgtgtttg cttagatcat atgaaacctg
     6661 ataaaccatt tattaaagat ttaacggatg atgatttaaa agaagcgata caaagagcca
     6721 tcaatgtaaa aaaaggtgaa ttctttatag cgcgtgcaat cacaccacaa gataaaagat
     6781 taaaaagtga caaagcattt attgcatttt tagaagaaac cttcgatcag ttcttaccat
     6841 tttattctgc ataaataact ttgtttaaat aatagagcac taaatcacat ccatgatttc
     6901 gtgctctttt ttcttaatat taaatcgaac gttcaacata ataattcata cttttaaaaa
     6961 aattaaaata attttaggtt gacctaatca ttttattagg ttattatatt gtccataaga
     7021 agtagaggtg agtcaaaatg aataataaac gacattcaac aaatgaacaa ttaagtttag
     7081 acgaaataaa caatacaatt aaattcgatc atcgcagttc aaataaacag aaatttttat
     7141 catttcttgg gcctgggtta ttagtcgctg ttggttacat ggatcccgga aactggataa
     7201 catcaatgca aggtggcgcg caatatggct atactttgct attcgtaatt cttatttcaa
     7261 gtttatcagc aatgttactt caaagcatga cagtgagatt aggaatagca acaggtatgg
     7321 acttagctca aatgacacga cattatttat caagacctat tgctataatc ttttggatta
     7381 ttgcagaact agcaattatc gccacagata ttgctgaggt tattggtagt gctattgctc
     7441 ttaatctcct atttaacata cctttaatcg tcggtgcact aataactgta cttgatgtat
     7501 ttttactact atttataatg aaatatggtt ttagaaaaat tgaagctatt gttggtacat
     7561 taattttcac agtgttattc atctttatat ttgaagtcta tatttcatca ccacagttga
     7621 acgctgtgtt aaatggattt ataccacata gtgaaatcat tacaaataac ggcattctct
     7681 atattgcatt aggtattatt ggcgctacaa ttatgcctca taatttgtac ttacattcat
     7741 caattgtaca atctagaaca tactcaagac ataacaatga agaaaaggcg caagcgatta
     7801 aatttgctac gatagattcg aacattcagt tatcaatcgc atttgtagtc aattgcttat
     7861 tattagtgtt aggagcatca ctatttttca actcgaacgc tgacgattta ggtggtttct
     7921 atgatttata tcacgcctta aaaactgaac ctgtactagg tgcaacaatg ggtgcaatca
     7981 tgagtacatt atttgcagtt gcattattag cgtcaggtca aaattcaacg attactggta
     8041 ctttagcagg acaaattgta atggaaggat ttttaagatt gcacatacca aattggttaa
     8101 gacgtttaat tacacgttcc cttgctgtca ttcctgttat cgtatgctta atcattttta
     8161 aaggtaatgc agctaaaatt gagcaactac ttgtattctc tcaagtattt ttaagtattg
     8221 ctctgccatt ctgtttaata ccattacaat tagctactag taataaagac ttgatggggc
     8281 ctttctataa taaaacatgg gttaatatca tttcatggac acttattatt attctaagta
     8341 ttttaaatgt ctatttaatc gttcaaacat tccaagaact acaaggttaa aaataaaacc
     8401 attaaaatgt tggttgtatc taataattaa caacttaaca ttttaatggt ttttcttttg
     8461 ctatgaacat attaatgata aatatactca tcgtccttat gtgtagtttc ttttgattct
     8521 tttttagaaa tcaacataat catcacgata atccataaga caattgcaat taaattaaga
     8581 gccatcaaac ttacaattat cgcgataaca aaaagtataa tcgataattt tctacgccct
     8641 ttaatacaaa ttgtcgcaaa tataccataa agtgttgaaa ttaataaaat aattgctaat
     8701 gcaccaattg ttgtctgaag catatctaaa gaaacattgc caccgttctg agataattgc
     8761 ttcgctaatt cttcgcgttg tgatgcatta ccacttttta aagaaaaata ggatagcccc
     8821 ataactaata aataaataat actaatacta ttt
//
LOCUS       DAKPJH010000102         8622 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.102, whole genome shotgun sequence.
ACCESSION   DAKPJH010000102 DAKPJH010000000
VERSION     DAKPJH010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8622
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.102"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(56..2056)
                     /locus_tag="OY092_002131"
     CDS             complement(56..2056)
                     /locus_tag="OY092_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1077056.1"
                     /translation="MKLRLLWHIVRRQFITQRLVIIPFILAVSVLFMIEYTLVSIGLN
                     SYIKQKNDFLVPFIIIANFFMALLTFIFIFYANHFMMSQRRKEFSIFMTLGMTKKSMR
                     LIVVMETILQFMIISVVSIAGGYLLGAIFFLFIQKIMGSEVATLRYYPFDSVAMFITL
                     IIIAVLMGMLLIFNLFSINFQRPITYQHRSDSSVISRWLRYVLIVIGSAALYLGYFIA
                     LQQDTTFGAFFKIWIVIGFVIIGTYAFFVGISEIIISILQQVSKVYYHPRYFFVVVGM
                     RVRLKMNAVSLATITLLCTFLIVTLTMTLTTYRDMNHTIMKLITNDYDLSFNDNSKSQ
                     IERQQMIENIKRDIQGSVNAKDFKVYETTLFRASLEKNRAYYKLKQASDDIPIDFIGN
                     EGSIFSKQSVMITALTVQDYNRYHQNKLHLDNQSIGMITNVPIFKKQSKVGLNNEVFK
                     VKQLDAHALNLMMIQDSMVLIVKDNNQLQKVKRFYAHEQKKSTISINFNVSGKTKLTT
                     SQIQKLSKKYDASINSKSEMLMVWDRLTGGLIFVGGVVSIVLVIGIFLMMYYKQVSEA
                     YANQHNYDIMKKLGLDNGRIAKITRNQMTFLFAIPITVALIHTLISSNIVYTLLNMIG
                     INNYHIFLTSYVLAVIIISFLYMAMYKITSYIYAKVIHQERN"
     gene            complement(2053..2808)
                     /locus_tag="OY092_002132"
     CDS             complement(2053..2808)
                     /locus_tag="OY092_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1077057.1"
                     /translation="MLLEVKHVKKVYGKGLNATTALNQMNLSVGAGEFVAIMGESGSG
                     KSTLLNLIASFDGLTEGDIIVDGAHLNNMKNESKALYRQQMVGFVFQDFNLLPTMTNK
                     ENIMMPLILAGAKRKDIEQRVHQLTVQLHLEGFLNKYPSEISGGQKQRIAIARALVTK
                     PTILLADEPTGALDSKTSKTLMMLFQEIHQLEQTILMVTHSNIDASYAERVIFIKDGR
                     LYHEIYRGEESQLAFQQRITDSLALVNGGSVNI"
     gene            complement(2916..3803)
                     /gene="nsaS"
                     /locus_tag="OY092_002133"
     CDS             complement(2916..3803)
                     /gene="nsaS"
                     /locus_tag="OY092_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system sensor histidine kinase NsaS"
                     /protein_id="HCX1077058.1"
                     /translation="MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILL
                     LLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNEQIEYKNDVESYFLTWVHQMKTP
                     ITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
                     PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFD
                     EQSNQLYVKDNGIGISEADLPKIFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPV
                     SVVSKQNEGTTFTIQFPDE"
     gene            complement(3814..4479)
                     /gene="nsaR"
                     /locus_tag="OY092_002134"
     CDS             complement(3814..4479)
                     /gene="nsaR"
                     /locus_tag="OY092_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system response regulator NsaR"
                     /protein_id="HCX1077059.1"
                     /translation="MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQ
                     PQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSRIDNMDQIMAIQMGGDDFIEKPF
                     NLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
                     LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVG
                     YKV"
     gene            complement(4505..4705)
                     /locus_tag="OY092_002135"
     CDS             complement(4505..4705)
                     /locus_tag="OY092_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077060.1"
                     /translation="MILVMLSPLLIIFFIVLSILEERKRTKKKQLEKEKANTLNQNTN
                     DMESSNQELSLQQAKEQKDNKG"
     gene            4903..6327
                     /locus_tag="OY092_002136"
     CDS             4903..6327
                     /locus_tag="OY092_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HCX1077061.1"
                     /translation="MLSVKKATKFAVANLIIVSTVFSSITPAIAQSDKSSKDESFAVG
                     NTKNPKNVIFLVGDGMGPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQ
                     NITDSAAGGTAFSSGHKTYNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDAT
                     PAAYAAHVTSRDDKNEIAKQFYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDG
                     YDLATNSKELSKSDKDKVLGLFADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGF
                     FLMVEGASIDKSAHSNDITGVMSEMEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGL
                     TIGKDKGYEWNPQPIKSMKHSGSYMTEKMAKGEDPEKVINEGYGFEFSQDDMKKVKKE
                     NKKLQKLLKKNKDEKSADVEKQTKALQHAIQKPVNDKSYTGWTSDGHTGEDVNTYAYG
                     PRSESFSGNIENTESAKIIFDIFK"
     gene            6397..6507
                     /locus_tag="OY092_002137"
     CDS             6397..6507
                     /locus_tag="OY092_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077062.1"
                     /translation="MLGAWLTRSWYFLNAKYKPPTNVKITANFFIIQTPF"
     gene            complement(6610..7065)
                     /locus_tag="OY092_002138"
     CDS             complement(6610..7065)
                     /locus_tag="OY092_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCX1077063.1"
                     /translation="MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFI
                     NKLPGITIKSLLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQL
                     IAELNKAQDELLQNIYQQVGSDWYDVMEALAKGRLGFDFIKHLKDEKES"
     gene            complement(7311..8072)
                     /locus_tag="OY092_002139"
     CDS             complement(7311..8072)
                     /locus_tag="OY092_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HCX1077064.1"
                     /translation="MAYISLNYHSPTIGMHQNLTVILPEDQSFFNNDTTAKPLKTLML
                     LHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHSAYANMAYGHSYYDYILEVYDYV
                     HQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWND
                     FSKEAIVGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYL
                     SRKNVPYQFEDGPGDHDYAYWDQAIKRAITWMVND"
     gene            complement(8188..>8622)
                     /locus_tag="OY092_002140"
     CDS             complement(8188..>8622)
                     /locus_tag="OY092_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HCX1077065.1"
                     /translation="SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKT
                     DDLPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA"
BASE COUNT         2853 a         1483 c         1288 g         2998 t
ORIGIN      
        1 atataatata tttcagtgaa aatacatgat tgattatgat ttcactgaaa catggttaat
       61 tacgttcttg atgaataact ttagcataaa tataggaagt tattttgtac atcgccatat
      121 atagaaacga aattataatg acagctagta cgtaacttgt taaaaatata tgatagttat
      181 taatacctat catatttagt aacgtatata caatgttact agaaattaat gtatgaatca
      241 gtgctactgt tattggtatt gcgaacaaga aagtcatttg atttcgtgtt atctttgcta
      301 ttcttccatt atctaaacca agttttttca taatgtcata attgtgctga tttgcatagg
      361 cttctgaaac ttgtttatag tacatcatta gaaatattcc aatgacaagt acaattgata
      421 ctacgccacc tacaaatatt agtccacctg tcagacgatc ccaaaccatt agcatttctg
      481 atttagaatt tattgacgca tcgtattttt tcgatagttt ttgtatttgt gatgttgtta
      541 atttcgtctt tccagataca ttaaagttta tcgatattgt cgacttcttt tgttcatgtg
      601 cataaaatct ttttactttt tgtaattgat tgttatcttt aacaattaaa accatactat
      661 cttgaatcat catcaaattt aacgcatgtg cgtcaagttg tttcacttta aagacttcat
      721 tattaagacc gaccttagac tgctttttaa aaataggtac attcgtaatc atacctatac
      781 tttgattgtc taagtgtaat ttgttttggt gatatcgatt ataatcttgc acagtaagtg
      841 ctgtgatcat tactgattgc ttagaaaata tcgagccttc attaccaatg aagtctattg
      901 gaatatcatc actagcctgt tttaacttgt aataagcacg attcttttct aaagaagctc
      961 taaataatgt cgtttcatat actttgaagt cttttgcatt aaccgaaccc tgtatatcac
     1021 gtttaatatt ctcaatcatt tgttgacgtt ctatttgcga cttagaattg tcgttaaatg
     1081 acaaatcata atcattggta atcaatttca taatggtatg attcatatcg cgataggttg
     1141 ttaatgtcat tgtgagcgtt acaatcaaaa atgtacacag caaagtgatc gttgcaagac
     1201 tgactgcatt cattttaaga cgtacacgca tcccaactac cacaaaaaaa taccgtggat
     1261 gatagtaaac ttttgatacc tgctgcaata tactaataat tatttcactt atacctacaa
     1321 aaaatgcata agtaccgata ataacgaatc ctatgacaat ccatatttta aaaaaggcac
     1381 caaacgtcgt atcttgttgt aatgcaataa agtagcctaa atatagtgct gcgcttccta
     1441 taacaattaa aacgtaacgc aaccatcgtg atatgacact ggaatcagaa cgatgttgat
     1501 aagttatcgg tcgttgaaaa tttatactga acaagttgaa tataagtagc atgcccatta
     1561 atacagcaat gataatcaaa gtaataaaca tcgctacaga gtcaaatgga taatacctta
     1621 acgtcgcaac ctcactgccc attattttct gtataaacaa gaaaaatatc gcaccaagta
     1681 agtatccgcc ggcaatacta acgactgaaa ttatcataaa ttgtaagata gtttccatca
     1741 ctacaattaa acgcatactt ttcttggtca tgcccaatgt cataaaaatg ctaaactctt
     1801 ttcgtctttg tgacatcata aagtgatttg catagaaaat aaaaataaaa gttaaaagcg
     1861 ccataaaaaa attagctatg ataataaatg gtactaggaa gtcattcttc tgttttatgt
     1921 agctatttaa cccaattgac acaagcgtat attcaatcat gaatagtaca cttaccgcta
     1981 aaatgaatgg aatgattaca agtcgctgcg taataaattg acgtcgcact atgtgccata
     2041 acaatcttaa cttcatatat tgacacttcc tccattcaca agtgctaagc tatctgttat
     2101 tcgttgttga aaagctaatt gactttcttc accacgatat atttcatgat atagacgccc
     2161 atctttaata aaaatgactc gctctgcata agacgcatcg atatttgaat gagttaccat
     2221 taaaattgtc tgttccaatt gatgaatctc ttgaaataac atcatcaatg tctttgatgt
     2281 ttttgaatca agtgcacctg taggttcatc ggctagtaaa atcgtcggct tagtaactaa
     2341 tgcacgtgca atggcaatgc gttgcttctg accccctgag atttcagaag gatacttgtt
     2401 taagaatccc tctaaatgta attgtactgt caactgatgt accctttgtt ctatatcttt
     2461 tcgtttagca ccagctaaaa ttaatggcat cattatattt tctttattcg tcattgttgg
     2521 taaaagatta aaatcttgaa aaacaaaacc taccatttgt tgacgataca atgctttact
     2581 ttcatttttc atattattta aatgtgcgcc atccacaata atgtcacctt cagttagtcc
     2641 atcaaaagaa gcaattaaat ttagtagtgt agacttccct gacccagact cacccataat
     2701 tgcaacaaat tcaccagctc caactgataa attcatttga ttaagtgctg tcgtagcatt
     2761 caaaccttta ccataaacct tttttacatg tttcacttct agcaacatgg catgcacctc
     2821 atttctttgt tagttctata ttaaaacaaa aaaatactaa taacatttaa attagtgaaa
     2881 aaatgttact agtatgctta caatattgaa agtttttatt catctggaaa ttgaatcgta
     2941 aatgttgtac cctcattttg tttagatacg actgaaacag gatggtttgt gtgagttgaa
     3001 atttgtttta cgataaataa gccaatccca cttgagttac tttgacgctg gccattataa
     3061 cctgaatagc ccttatcaaa tattttaggc aagtccgcct cactaatacc gataccatta
     3121 tcttttacat ataattgatt ggattgctca tcaaattcaa tccatatatc tttacctctc
     3181 gcatacttaa gtgcattatt tattaattgt tctatcatta aagaggtcca tctaacgtca
     3241 gttaatactt cgtgatgaca aggttcataa tggatttttg ttttttgatc aataaactgt
     3301 attgaatatt tcataataat tgggcgaatg atattgttaa tcgaaatttt agtgacagaa
     3361 atatcagaag tttcatttaa taactttaaa taactaagtg ctaaacttgt atagttatca
     3421 atttgaataa cctcttgacg aacacgattc acaacattag gctcatctct ttcaagtaac
     3481 agttgtgctg cagtaatggg tgttttcatt tgatgtaccc atgttaaaaa gtagctctct
     3541 acatcatttt tatattcaat ttgttcattt ttaagctgat acaacgcatt ttctaagttt
     3601 tcaatttgtt gttgttggct tatagttttt acaaaactta aatatttaat acctatgaat
     3661 atgagtaata ataataaaat aacgccaagt gctagtaaat atgcttctaa tggcaaatga
     3721 tacaggtaaa acattaagcc aaataaagca aaaataacta tgactattgc tatttcctga
     3781 gtaatacttt taagaaaggt cattgcattc accctatact ttatatccga catttttctt
     3841 tgtaataata aaatcattaa cgccaatagt atttaatttt ttacgcaggc gcgtcatgtt
     3901 aacagctaat gtattgtcat ctatgaagtt ttctgattcc caacattttt caattaaagc
     3961 cgttctactt acatatttat cttcattttg aaataataac tttaatattt gtaattcagt
     4021 caaagatagc tgtatgtttt gttcttgata cacgactttt gcttcatcta atattaatgt
     4081 acaaccttta accgtcatcg aatcattagc tactgacaag tcataagttc gtctcaataa
     4141 tgcttgaatt ttggcaatcg ttaatgacaa gttaaatggt ttttcgataa aatcatctcc
     4201 ccccatttgt attgccataa tttggtccat attatcaata cgggaactaa taaatataat
     4261 tggcacatta gatgtttttc ggatttcttg acaccaatga aaaccattta acgttggcaa
     4321 attaatatct agcaatacaa gctgaggttg atgttggtta aagatagaca gtatatcatc
     4381 aaattgttca acgacaataa caccgtaatt ccatttttta agttcagatg ctaaactttc
     4441 tgctataaca aaatcatctt caacaattaa tattttcatc tataatcttc ttccttcaat
     4501 tgaattatcc tttgttatct ttttgttctt tagcctgttg caatgacagc tcttgatttg
     4561 aactttccat gtcatttgta ttttgattta gtgtatttgc tttttctttc tcgagttgct
     4621 ttttcttcgt acgtttacgc tcttctaaaa tagacaacac tataaagaat atgattaata
     4681 atggagataa cattactagt atcatttttc cacctcaaat tatatttaat tctatatttt
     4741 cacacgcttc tattctaacg ctttctataa caaattgtca tatatattca ttttttgtta
     4801 ttctaaatca ctctgtttac atatttttaa ctaaaactac ataattgctc aaaattcctc
     4861 ttttacactg aagacatagt catatactca ggaggatgtc ttatgttatc agttaaaaaa
     4921 gccacaaaat ttgcagttgc taaccttatt atcgtgtcaa cagttttcag ttctatcaca
     4981 cctgcaattg cgcaatccga taaaagttct aaagatgaaa gtttcgcggt tggtaatact
     5041 aaaaatccta aaaatgttat ctttttagtt ggcgatggta tgggtccatc atttaacaca
     5101 gcttatcgtt attataaaaa tgatccacat gccaaagaaa tgacccctac tgcttttgat
     5161 tcatatttaa aaggcacaaa tcgtacatat tcaaatgatc caaaacagaa tattactgat
     5221 tctgcagctg gcggaacagc ctttagttct ggccataaga catataatgg tgccatcggt
     5281 gttgacagta acaagcagaa agtaaagacg gtgcttgaac gtgcaaaaga aaaagggaag
     5341 tcgactggtc ttgtttcaac agctgaatta acagatgcaa caccagcagc atatgctgca
     5401 cacgtgactt ctagagatga taaaaacgaa atcgctaaac aattttataa agataaaatc
     5461 aacggaaagc ataaagttga tgttttatta ggcggtggcg ctaaatattt cggtaaaagt
     5521 aatggcaatt tagataaaaa attcaaaaaa gatggttacg accttgccac gaacagtaag
     5581 gagttatcaa aatctgataa agataaagtt cttggtttgt ttgcagataa aaatatgcca
     5641 cttgcaatag atgcttctaa agacgaacca tcattagctg atatgcaaca aagtgcactt
     5701 agtaagcttg agcgtaataa aaaaggtttc tttttaatgg tcgaaggtgc ttctatagat
     5761 aaatcagcgc attctaacga tattacaggc gttatgtctg aaatggaagg ttttgaaaaa
     5821 gcattcgatg acgccattca atatgctaag aaacataaag atacacttgt cgttgcaaca
     5881 gcagatcact ctactggtgg tctaacaatt ggtaaagata aaggatacga atggaatcct
     5941 caaccgatta aatcgatgaa acactctgga tcatatatga cagaaaaaat ggctaaaggt
     6001 gaagaccctg aaaaagttat taatgaaggt tatggctttg aattttcaca agatgatatg
     6061 aaaaaggtta aaaaagagaa taaaaagttg caaaaattac ttaaaaaaaa taaagatgaa
     6121 aaatctgcag atgtagaaaa acaaacaaaa gccttacaac acgctattca gaagccagta
     6181 aatgataaat cttatacagg gtggacttcc gatggacata caggcgagga tgttaatacc
     6241 tacgcttatg gacctagatc agaatcattt agtggtaata tcgaaaatac agaaagcgca
     6301 aaaataatat ttgatatatt caagtaaagc ataaaaaaat tcccgagcac tataacaagg
     6361 tgttcgggaa ttttttatgg tttaatttag tactcaatgt taggtgcttg gttaacacgt
     6421 tcttggtatt ttttaaatgc gaagtataaa ccgccaacta atgttaaaat aactgctaat
     6481 tttttcatca ttcaaactcc tttctaagat gtgttgaaac tgagttcaat taaattatat
     6541 gtttttatta tacacttttt gacatatttt ttaaatttaa gaatgcgaag atttttaaca
     6601 tttctgatgc tagctttctt tttcatcttt caaatgctta ataaaatcaa agccaagtcg
     6661 ccctttagcc aatgcttcca tcacatcata ccaatccgaa ccgacttgtt gatatatatt
     6721 ttgcaataat tcatcttgcg ccttgttcaa ttcagcaatg agttgatcgc ctttatccgt
     6781 cgaatataat tttttgacac gtcgatcagt ctctaaaact ttttcaataa tgagaccttg
     6841 ctcttttaat ttttgaagtg ttgcatgtga tccttgttta gaaatttcta atatttctag
     6901 taatgattta atagtaatac caggtaattt attgataaaa aacaaaaaac gatgatgctg
     6961 acgactcata ccatacttct ctataatttc atcagcggta gtaataaacg ttttatatgc
     7021 aaaataaaac aacatatgct cataatcgtt tttattggtc gacatgatga tgactccttt
     7081 caaagcgtta acctcattat aataaaattt ataatgtaag tcatacaaat gatgataaaa
     7141 ctataagcta aatctaagtt tcacgagaaa catttttgtg tatcagcaaa ttgcgccaat
     7201 catattaata caaatttaat ttaaacactt agaaatgtta gtcgtgcgta aatagtttgt
     7261 atctctcact ctgtgtattt tgatgcaatc acatattttc caggaaataa ttaatcattc
     7321 accatccatg ttatagcacg cttaatcgct tggtcccaat atgcataatc atgatctcct
     7381 ggtccatctt caaattgata aggaacattt ttgcgtgata aataatcgat aaaatctaag
     7441 ttgtcttgat ataaaaagtc ttgtttacca cacataatga gcaattttgg aatttgttta
     7501 tcttcagcta cagctttgtc tagcaaataa tacggatcat gttcagttcc tttaacactt
     7561 gaaagattgc caactatggc ctcttttgaa aaatcattcc actctagatc cattaaattt
     7621 tgcgcttcaa acacagcaga taatggtaca gctttggcaa atttatcgcc ttgtgttaat
     7681 gcaaatttaa ttgtgccata tcctcccata gagtgacctg ctataaaatt gtcatcacgc
     7741 tttttggaaa gtggaaatat ttgatgaaca taatcatata cttccaaaat ataatcataa
     7801 tagctatgac catatgccat gttagcatat gcgctatgat ccacattggg cataatcaca
     7861 gctaatttgt gttcattcgc atacctttct atgcttgtat atctcatata tgtcgtttca
     7921 tcacttgata atccatgtaa caacattaaa gtttttaatg gtttagcagt tgtatcgtta
     7981 ttaaagaagc tttgatcttc cggtaaaatg actgtcaaat tttgatgcat accaattgtt
     8041 ggtgaatgat agtttaatga aatataagcc atacgtcatg acccctttct aattcttctt
     8101 tatcaacatt ttacgcttaa acaattcact ttaaaatcat tttcaacaaa aaaaccgaat
     8161 acaaatgtat tcggcctaaa aaagtattta cgctttttct ttatgatctt gcttacgttt
     8221 tctaaacaat agtaatgatc ctaataatgc catcattgca ccaaataaag ttgcatttgt
     8281 gttttcgctc ttatctcctg tttctggtaa atcatcagtt ttgtgttgtt ttgatgcctt
     8341 attagaatgg tttacttcac ctttaggatt tgatggtgct ttctgttcat tatttggtgg
     8401 tgtaactctt gaatcggagt cactatctga gtctgagtca ctgtctgagt ccgagtcact
     8461 gtctgagtct gagtctgaat cgctatctga gtccgagtcg ctgtctgagt ctgaatcgct
     8521 atctgagtcc gaatcgctgt ctgagtctga atcgctatct gagtccgaat cgctgtctga
     8581 gtctgagtcg ctatctgaat ctgaatcact atctgagtct ga
//
LOCUS       DAKPJH010000103         8534 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.103, whole genome shotgun sequence.
ACCESSION   DAKPJH010000103 DAKPJH010000000
VERSION     DAKPJH010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8534
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.103"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            226..579
                     /locus_tag="OY092_002141"
     CDS             226..579
                     /locus_tag="OY092_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HCX1077066.1"
                     /translation="MFSIGSAILHFVIGGIAVALASIIADKVGGKLGGIIATMPAVFL
                     AAIIALALDHRGTQLVEMSMNLSTGAIVGILSCILTVFLTSLYIKHKGYRKGAIFTVV
                     CWFVISLAIFSIRHL"
     gene            647..1042
                     /locus_tag="OY092_002142"
     CDS             647..1042
                     /locus_tag="OY092_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HCX1077067.1"
                     /translation="MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVS
                     MFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFIS
                     AVCIFEAVEFIAQKRLEKHSWKAGKSNSK"
     gene            1302..1871
                     /locus_tag="OY092_002143"
     CDS             1302..1871
                     /locus_tag="OY092_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077068.1"
                     /translation="MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDI
                     HNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNLWTYVMLIFMTLAAILMGPLVVY
                     WNWTWGITVAIILGIGFYASMKIEDLKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNT
                     MTNALSIISVVGTLSLIIFLSVYLANKFL"
     gene            complement(1989..2189)
                     /locus_tag="OY092_002144"
     CDS             complement(1989..2189)
                     /locus_tag="OY092_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCX1077069.1"
                     /translation="MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEG
                     QKVTFEITEGQRGDQAVNVQTV"
     gene            complement(2582..2773)
                     /gene="vraH"
                     /locus_tag="OY092_002145"
     CDS             complement(2582..2773)
                     /gene="vraH"
                     /locus_tag="OY092_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter activity
                     modulator VraH"
                     /protein_id="HCX1077070.1"
                     /translation="MKFRELVKQSYEDLKNLTVTWYNVIALTILVIVLSSFTTPMIGI
                     PAGLLGGSYYLKRREEKGK"
     gene            complement(2865..4745)
                     /gene="vraE"
                     /locus_tag="OY092_002146"
     CDS             complement(2865..4745)
                     /gene="vraE"
                     /locus_tag="OY092_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter permease
                     subunit VraE"
                     /protein_id="HCX1077071.1"
                     /translation="MTFNHIVLKNLRQNLKHYAMYLFSLFFSIVLYFSFTTLQFTKGV
                     NNDDSMAIIKKGALVGSIFLFIIIVIFLMYANHLFVKRRTREFALFQLIGLTRQNILK
                     MLALEQMIVFLITGVVGVLCGIAGAQLLLSIVSKLMSLSINLSIHFEPMALVLTIFML
                     IIAYVLILFQSALFLKRRSILSMMKDSIKTDVTTAKVTTAEIISGVLGIAMIALGYYM
                     ATEMFGMFKALTMAMTSPFIILFLTVVGAYLFFRSSVSLIFKTLKKSKNGRVSITDVV
                     FTSSIMYRMKKNAMSLTIIAIISAVTVTVLCFAALSKSNTDQTLTSMAPNEFNVVATQ
                     DAKQFETKLSQQQITFSKNAYETITVDNVKDQVITLENGSDSGRTNSILSANNKLTGN
                     NAIITNTKSLPNVINIHLNKDLVVKGTKNETFRVTQEDKGKVYPLNLSFNSPVVEVSP
                     EKYQQLKTQNNVHTFYGYDIKQTSQKEKAQAIAKQFGDKVITYDEMKKEVDATNGILI
                     FVTSFLGLAFLVAAGCIIYIKQMDETEDELSNFRILKRIGFTHTDMLKGLLLKITFNF
                     GLPLLIAILHAVFAAIAFMKLMGNISFMPVIVVIVVYTLIYITFALIAFVHSNKLIKK
                     TI"
     gene            complement(4735..5493)
                     /gene="vraD"
                     /locus_tag="OY092_002147"
     CDS             complement(4735..5493)
                     /gene="vraD"
                     /locus_tag="OY092_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter ATP-binding
                     subunit VraD"
                     /protein_id="HCX1077072.1"
                     /translation="MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSG
                     KTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVK
                     ENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHK
                     PQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDG
                     QIHTQLYQEGRSKQAFYEDIVHLQSVLGGVSNDI"
     gene            5783..6295
                     /locus_tag="OY092_002148"
     CDS             5783..6295
                     /locus_tag="OY092_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HCX1077073.1"
                     /translation="MAKANQGIKWSSLIMGVLLLMLAVVIFTFPIENFYAITWLIGLF
                     VLINGVIQIIYRRKAKALVGGNQNWILFMGIVDILFGLIVIFNVGASSAFFIYMFAFW
                     FIFSSIAGLFTFTGSGSLKLISVIFNLLGIVFGVILLFNPLMGIVFISTMIAIAFVFV
                     GVIYVVDALA"
     gene            complement(6429..7229)
                     /locus_tag="OY092_002149"
     CDS             complement(6429..7229)
                     /locus_tag="OY092_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HCX1077074.1"
                     /translation="MNIAKLEDYLQIEPTRYNQPSIEALNYYATRFMLTVPFENIDVQ
                     NGKPISVDIDALFNKIVHDKRGGFCYELNTFFKAYLQQKGFNPELMSATIHTPGGGRS
                     LNGSHASLVVSINDVFYVTDVGFGDLPLHVIPITSSEHTQPITDISGTFRAIFNNEDK
                     DIFYVQKFENDHWHTKYEAEFKPKQIEDFNSNIEYNQTNPDSIFVQHLLITMPQSFGR
                     ATMSENHLTLTKAKDGISEKLAVTKDNYKHFLEKYFGLDITINRIEKQ"
     gene            complement(7472..8488)
                     /locus_tag="OY092_002150"
     CDS             complement(7472..8488)
                     /locus_tag="OY092_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HCX1077075.1"
                     /translation="MTVFKNQRLSWLPYIAIVILLHVIGFSFLWIAGKDHHILFGMGI
                     LAYTLGLRHAFDADHIAAIDNTVRKLLQQRKDPSGVGFYFSIGHSSVVFLMAVFLGVS
                     VKWAKDELPHFQDIGGTIGTLVSGFFLVLIGVLNLIILISLINLFAKLRREHIEEAEV
                     DALLESRGLVSRFVGPYFKLITRSWHVLPLGFLFGLGFDTASEIALLALSSGASQQAI
                     SFIGILSLPILFASGMSLLDTLDGVVMKYAYNWAFFNPIRKIYYNITITAISVMAALV
                     IGMIELLQILADKLDLHGAFWAFIGSIEFDYLGYILVALFLITWLISSLIWKFGRIEH
                     KWSK"
BASE COUNT         2814 a         1302 c         1479 g         2939 t
ORIGIN      
        1 ggggtgggac gacgaaataa attttgcgaa aatatcattt ctgtcccact ccctaatttg
       61 agctggatat actttcattt gaacccttta ttgctagttt atgaaagtat catgaaagct
      121 ttatgaacat cgcttgagtt gcctttacag tagaaaattt aagttttaca ctttgtgtga
      181 atgatacgtt ttgtattgaa ttaattatag aaaggtacgt tgaagatgtt ttcaattgga
      241 agtgcaattc ttcattttgt cattggtggt atcgctgttg cattagcttc aattattgct
      301 gataaggtag gtggtaagtt aggaggtatt atagctacta tgccggcagt ctttcttgcg
      361 gctattatcg cattagcttt agatcatcgt ggtacgcaat tagtggagat gtcgatgaat
      421 cttagtactg gagcaattgt cggtattctg tcttgtatat taactgtatt tttgacatct
      481 ctctacatta agcataaagg ttatcggaaa ggcgcaatat tcacagttgt ttgttggttt
      541 gtcatttccc tcgcaatatt cagtattaga catttatagt ttggaaaatg cgtgataatt
      601 agttgtattc agttattaag taataaatta ttggaggcag aacatcatga aattaacatt
      661 aatgaaattt tttgtggggg gatttgcagt attattaagt tatattgtat ctgtaacact
      721 accttggaaa gaatttggcg gtatatttgc aacgtttccg gcagtatttt tagtgtctat
      781 gtttattaca ggtatgcaat atggtgataa agtcgctgtg catgtaagtc gtggcgcagt
      841 gtttggtatg acaggggtat tagtttgtat tttagttaca tggatgatgt tacatatgac
      901 gcacatgtgg ttgattagca ttgttgttgg tttcctaagc tggttcatca gtgcagtatg
      961 tatttttgaa gcggtagaat ttatagcaca aaaaagatta gaaaagcata gttggaaagc
     1021 tggaaaatcg aatagtaaat agtgtgaacg taatctctta actaggacta actttgcaag
     1081 cattgaatag catggaaaag ttgcatcatt aataagtgaa attcaagttg gcattgagaa
     1141 aattacaagc gcgtaatcat acaggtctgt cttaagggag tcttcgaacc ccgatgttgt
     1201 cgtatgtcaa aacatttagt caatcataca ggtgacttga tttaacttta tctgatagtc
     1261 tgattgtaat gattgtacta attgaatgga ggcgtatgta attgaatctg agtaaacaaa
     1321 ttaaaaaata tagggaacga gatggttatt cacaagaata tcttgctgaa aagttatatg
     1381 tatctaggca gagtatttct aattgggaaa atgacaaaag cttaccagac atacataact
     1441 tattaatgat gtgcgaattg ttcaatgtaa ctttagatga tttagtaaaa gggactattc
     1501 catttgtacc tgatattaaa gtgcaacgaa gtcttaactt atggacatat gtgatgctta
     1561 ttttcatgac attagctgca attttaatgg gacctttagt tgtttattgg aattggactt
     1621 ggggtataac ggtggcaatc attttgggaa taggctttta tgcatctatg aaaatagaag
     1681 atttaaaaaa agtgcataaa atggacaact acgatcgaat tgttgctttt atgaatggaa
     1741 aagatcctag tgaagtacaa acgactaaag ctagaaatac gatgacaaat gcgctttcta
     1801 ttatatcagt agttggtaca ctcagcctca taattttcct tagtgtgtat ttggcaaata
     1861 aatttttata aatcatcatc gtatcgtctc atattatccg aaatagcata aaaaaatacc
     1921 aacaaggttc taaaccttgt tggtaatcaa agcgattcat ttataatgag tcgttttatt
     1981 ttgtaagatt aaacagtttg tacgttaact gcttggtctc cacgttgacc ttcagtgatt
     2041 tcgaaagtaa ctttttgacc ttcttctaaa gttttgtagc catcgctagc gatacctgag
     2101 aaatgtacga atacgtctcc gccattttct tgttcgatga aaccaaaacc tttttctgcg
     2161 ttaaaccatt ttactgtacc gttattcata tagaaaacct ccatgtgctt ttgcacttaa
     2221 tatttgtaac aaattcataa ctaaaaaaga ggatattcta aacaaataca ctacaattta
     2281 attcacgagc ttttattacg taagaccaac tatacgctca tattggcata atgtacagtg
     2341 ttttttgaaa ataaattaaa aaagattttt aaaaacctta gaaacgttga tttaaagggg
     2401 tttataaaaa taaaaaaatt gtagtctttt atggtgtttg ctagttttca aagtgacata
     2461 tcgtttaaac atgatgattt tataagcaat ccataaaaaa caagcagcga taaacgctac
     2521 ttgttgatat taaaatctga cttgaaaggt catagcaatg ttctataccg atggaatgtg
     2581 cttacttgcc tttttcttca cgacgtttta aataatagga gccacctaat aaaccagctg
     2641 gaatgcctat cattggtgtt gtgaatgagc ttaatacaat aacaagtatt gttaaagcaa
     2701 tgacgttata ccaagttaca gtcaaatttt tcaaatcctc gtatgattgt tttactaatt
     2761 ctctaaattt catgattcaa tctctccttt ttataaatca gttaatagtt atactgcatt
     2821 gcttaaaatc aaaatctcaa tgaagcatct tttaatcgta agtgttaaat ggttttctta
     2881 atcaatttgt ttgaatgtac aaaagcaatt aaagcaaaag taatgtaaat gagtgtgtat
     2941 acaacaatta ctacaataac cggcatgaag gaaatattac ccatcaattt cataaatgct
     3001 attgcggcga atactgcatg taatatagca atcaataatg gtaaaccgaa gttgaaagta
     3061 atttttaata ataatccctt aagcatatct gtatgcgtaa agcctatgcg ttttaatatt
     3121 ctgaagttac ttagttcatc ctcagtttca tccatttgtt taatataaat aatacatcca
     3181 gctgctacta aaaatgctaa tcctaaaaat gatgtaacaa atattagaat accgttagta
     3241 gcatcgacct cttttttcat ttcatcatac gtgatgactt tgtctccaaa ctgttttgca
     3301 attgcttgag ctttttcctt ttgtgatgtt tgtttaatat catatccata aaaagtatga
     3361 acgttatttt gtgttttcaa ctgctgatac ttttcaggac ttacttcgac gacaggtgag
     3421 ttgaagctta gatttaaagg ataaacctta cctttgtctt cttgtgtaac acggaaagtc
     3481 tcgttctttg taccttttac tactaaatct ttgtttaaat gaatattaat cacgttaggc
     3541 agcgattttg tatttgtaat gatggcattg ttgcctgtta acttgttatt tgcacttaat
     3601 attgaattcg tgcgacctga atcactacca ttttccaaag taataacctg atctttaaca
     3661 ttatctacag taatagtttc gtaagcattt ttagaaaatg taatttgttg ttggcttagt
     3721 ttagtttcaa attgtttagc atcttgagta gcgaccacgt taaattcatt tggtgccata
     3781 gatgtaaggg tttgatctgt atttgattta gataatgccg cgaaacacaa tacagttact
     3841 gtaactgcag aaataattgc aatgatagtt aaagacatgg catttttctt cattctgtac
     3901 ataatagacg atgtgaatac aacatcggta atagatacgc gtccattttt tgattttttc
     3961 aatgttttaa aaataagtga cacggaactt ctgaagaata aataggcgcc tacaaccgtt
     4021 aaaaataaaa tgataaacgg tgatgtcata gccatagtta gtgctttgaa cataccaaac
     4081 atttctgtcg ccatataata tcctagtgca atcatagcaa tacctaatac gcctgaaata
     4141 atctctgcag tcgttacttt agcagttgta acatcagttt taattgagtc tttcatcatt
     4201 gataagatac tacgtctttt tagaaataaa gcactttgaa ataaaatcag tacatacgca
     4261 ataattagca tgaaaatagt taaaacaagg gccataggtt cgaaatgtat cgataagtta
     4321 atcgataacg acatcaattt agatacaatg gaaagcaata attgtgcacc tgcaatgcca
     4381 cataatacac cgacaacacc tgtgattaaa aatacaatca tttgttcaag tgctaacatt
     4441 ttcaaaatgt tttgtcgtgt taaaccaatc aactgaaata gcgcaaattc acgtgtacgg
     4501 cgtttcacga ataaatgatt ggcatacatt aaaaagatga caataatgat aaataaaaat
     4561 attgatccga ctaaagcacc tttcttaatg atggccatcg agtcatcatt atttacacct
     4621 ttagtaaact gtaaggttgt aaaactgaaa tataagacga tgctaaaaaa taatgaaaat
     4681 aaatacattg cataatgttt taagttttga cgtaagtttt ttaaaacgat atggttaaat
     4741 gtcatttgag acaccaccta atactgattg aagatgtaca atgtcttcat aaaaggcctg
     4801 tttagaacgt ccttcctgat aaagttgtgt atgaatttgg ccatctttta gcatgatgac
     4861 acgttctgca aaacttgctg caaccggatc atgtgtaacc atgacaatag ttgtatcaaa
     4921 cgatttattc atttcttcca aacgttgtaa taagtcattt gcacttttcg agtcgagtgc
     4981 gcctgttggc tcatctgcaa atatgatttg tggtttatga acaaatgctc tcgctgctgc
     5041 agttctttgt tgttgaccac cagataattc gctagggtat ttatttccca ggtcataaat
     5101 acctaatgct gtagtaatcg ctttataatt ttcttccatt gttgctttcg acattttttg
     5161 aacagataaa ggtaacataa tgttttcttt aacagttaat gtcggcagaa tactgtaatc
     5221 ttggaagatg aaacctaatg attctttacg gaatttggca agtgcttttt gattaagttt
     5281 attaagctct tgtccgttag caatcacgct accgctagaa atttggtcaa ttgaacttag
     5341 tacatttaat aaggttgtct tacctgatcc agaaggcccc ataatcgcaa cgaattcgcc
     5401 tttttgtatg tcaaagttaa tatctttaag tgcttgaaat gtgtgctttt taccgtatgt
     5461 ttttgaaaca tgttgcactg ataatatcgt catagtatca ctccttttgt atttaatttc
     5521 attttaaata atgtttggag tagtagcctt tatctaaact tacaattcaa tgtttgaatc
     5581 ttacatagtt gaaagatatt aatatatcgt gattttctcg ggtgaatttg gattattgga
     5641 aagcaattca actaatctga gcatcacagt attagcagtg aggaaatgtt tctataagtt
     5701 aagatgaggg aatttaaaca atgaataata gtggcactaa tgaaaatata aagagggctt
     5761 tatttgaaag gaattgattt ttatggcaaa agcaaaccaa ggtattaaat ggtctagttt
     5821 aataatgggt gtattattat taatgttggc agttgttatt tttacattcc caattgaaaa
     5881 tttttatgct attacctggt tgattggact gtttgtatta attaacggtg tgattcaaat
     5941 catttaccgt agaaaagcaa aagctttagt aggtggtaac caaaattgga ttctgtttat
     6001 ggggattgta gatattctct ttggtcttat tgtcattttt aatgttggcg ctagctcggc
     6061 attttttatc tacatgtttg cattctggtt catttttagt tctattgcag gattatttac
     6121 gtttacgggt agtggtagct taaaattaat ttcagtgatt tttaatttat taggtattgt
     6181 tttcggtgtc attttattat ttaatccatt aatgggtatc gtctttattt cgacgatgat
     6241 tgctattgca tttgtattcg taggtgtcat ttatgttgta gatgcacttg cttaagtaaa
     6301 atgaagcggt tcaaaagaag ggtgtgacat gaagtttgtg tcatatcctt tttgttgtgt
     6361 ttatgaagca taaaaaaggg gcgctaccta caataagtaa gatacgccca tatttttata
     6421 ttttactatt attgtttttc aatacgatta atagttatat ctagtccaaa atatttttct
     6481 aaaaaatgtt tatagttatc tttagtgaca gctaactttt ctgagatgcc atcctttgct
     6541 tttgtcaaag ttaaatgatt ttcagacatt gtagcgcgtc caaatgattg tggcattgta
     6601 attaataaat gctgtacaaa tattgaatct gggttggttt ggttatattc gatgttgcta
     6661 ttaaaatctt ctatttgttt aggtttgaat tcagcttcat attttgtatg ccaatgatca
     6721 ttttcgaatt tttgaacata gaaaatatcc ttgtcttcgt tgttaaaaat agcgcggaat
     6781 gtaccactga tatcagtaat tggttgtgta tgctcagatg aagtaatagg aatgacatgt
     6841 agaggtaagt ctccaaagcc aacatcagtt acatagaata catcatttat agaaacaaca
     6901 agtgaagcat gtgaaccgtt cagactacga ccgccaccgg gtgtgtgaat agtagctgac
     6961 attaattcag gattaaatcc tttttgttgt aaatatgctt tgaaaaatgt atttaactca
     7021 taacaaaaac caccgcgttt atcatgaaca attttattga aaagtgcatc gatatctaca
     7081 gatattggtt taccattttg aacatcaata ttttcgaaag gcaccgttaa cataaagcga
     7141 gtcgcataat aatttaatgc ttcaatactc ggttgattat aacgagttgg ttcaatttgg
     7201 agataatctt ctaactttgc aatattcatt agtataccgc ctcctgtatt aaagattata
     7261 attaaatttt aaacagaaat gctgaaattt taaattcgaa agcattgaat tttggataaa
     7321 tacattttaa atagaaaaat acgctctcaa aatgaagtca tctctaaaag aaacgattta
     7381 aagatgacaa cagagagcat atcctaaatg agtcagtatg cagggtgtct aaaaatgcaa
     7441 caatacaaag gtagttgcaa gacaagttac tttatttaga ccatttgtgt tctatgcgac
     7501 caaacttcca aattaaactt gaaataagcc aagtaattaa aaataatgca actaaaatat
     7561 aacctaaata atcaaattcg atcgaaccaa tgaatgccca aaacgcacca tgtaaatcta
     7621 gcttatcagc aagaatttgt agcaattcaa tcatcccaat cactaatgct gccatgactg
     7681 atatcgcagt aatcgttata ttgtaataga ttttgcgaat aggattgaag aatgcccaat
     7741 tataggcata cttcattaca acaccatcta atgtatccaa taaactcata cctgatgcga
     7801 ataaaattgg taaagataag attccgataa atgaaatggc ttgttgtgat gcgcctgaag
     7861 aaagagcgag taacgcaatt tcactagctg tatcaaaacc aagtccaaat aaaaagccaa
     7921 gtggcaatac gtgccaacta cgcgtgatta atttgaaata aggtcctaca aatcgagaaa
     7981 ccaatcctct agattcaagt aatgcatcga cttcagcttc ttcaatgtgt tcacgacgta
     8041 atttagcgaa caagttaatt aaagagatta aaataattag attcaacaca ccgataagca
     8101 ctaaaaagaa acctgaaact agtgtaccaa tcgttccacc aatatcttgg aaatgcggta
     8161 attcatcttt agcccatttt acagataccc ctaaaaaaac agccattaaa aatacgacag
     8221 atgaatgtcc aattgaaaaa tagaaaccta caccagatgg atctttgcgt tgctgtaata
     8281 atttgcgaac cgtattatct atcgcggcga tatgatctgc atcaaatgca tgacgcaaac
     8341 ctaatgtata tgcaagaatc cccataccaa ataagatatg atggtctttt ccagcaatcc
     8401 ataaaaaact aaacccaata acgtgtaaca aaatgacaat agctatgtat ggtaaccagc
     8461 ttaaacgctg atttttaaaa acagtcaaaa tatatccttc tttcataaca tgatatttaa
     8521 tcatactgta tgtt
//
LOCUS       DAKPJH010000104         8504 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.104, whole genome shotgun sequence.
ACCESSION   DAKPJH010000104 DAKPJH010000000
VERSION     DAKPJH010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8504
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.104"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..274
                     /locus_tag="OY092_002151"
     CDS             <1..274
                     /locus_tag="OY092_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000891995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077076.1"
                     /translation="NEYNNKKNNSSLLPSYTIIDSNESEKMTKKEFIDIPVLFDDEGN
                     FRIKQVIDYKKIIGKSYVNGKYIETKLGKVHYSKTGFHVVPYIKKE"
     gene            281..472
                     /locus_tag="OY092_002152"
     CDS             281..472
                     /locus_tag="OY092_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HCX1077077.1"
                     /translation="MNLQSYIGKLVKLTLTNNKILIGKVIDFDDKVDNFDGYNSIEID
                     TGRITYDISENKIKTIVLQ"
     gene            complement(1021..2046)
                     /locus_tag="OY092_002153"
     CDS             complement(1021..2046)
                     /locus_tag="OY092_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HCX1077078.1"
                     /translation="MISFENDYLEGAHEKVLKRLVDTNLVQASGYGFDQFTNQAIEKI
                     KDTIDCPNATIRFLVGGTQTNQVVINSMLESYEGVISADTGHVAVHEGGAIEYSGHKV
                     ITIPSKEGKVSASDVETYMETFKSDFKKDHMVFPGMVYISHPTEYGTLYSKSELEELC
                     KVCKQYQLPLFMDGARLGYGLMSDQSDMTIKDIAKYCDVFYIGGTKIGALCGEAIVFT
                     KNNEPKQFTTRIKHHGALLAKGRLTGIQFLELFTDNLYFNISRHAIEMANKMKDGFKN
                     KGYRLYFDSPTNQQFFILSNEKIAELEQKVKFAVWEKYDDQHRVVRFATSWATTEENL
                     NKLLELI"
     gene            2316..2513
                     /locus_tag="OY092_002154"
     CDS             2316..2513
                     /locus_tag="OY092_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077079.1"
                     /translation="MEQIKLKTFTAETLELLESNINEFLGSEEATNLKLVNITIKEIE
                     ERTFPNNEEEFNAILTLSVNK"
     gene            2570..4051
                     /gene="cls"
                     /locus_tag="OY092_002155"
     CDS             2570..4051
                     /gene="cls"
                     /locus_tag="OY092_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HCX1077080.1"
                     /translation="MQFSFSNDLGTLFTIILAIAFIINLVLAFIIIFLERNRRTASST
                     WAWLFVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDALLKQQIESFDKGNYG
                     TDNKQVQKHHDLVRMLLMDQDGFLTENNKIDHFIDGNDLYDQVLQDIKNAKEYIHLEY
                     YTFALDGLGQRILKALEEKLKQGLEVKILYDDVGSKKVKMANFDHFKSLGGEVEAFFA
                     SKLPLLNFRMNNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAV
                     DALQLRFILDWNSQAHRPQFEYDEKYFPKKNKSFGNAPIQIAASGPASDWHQIEYGYT
                     KMIMSAKKSVYLQSPYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNA
                     SDLLSSGVKIYTYENGFIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLA
                     KDLRAAYEHDITKSKQLTEESYANRPLSVKFKESLAKLVSPIL"
     gene            4223..5131
                     /locus_tag="OY092_002156"
     CDS             4223..5131
                     /locus_tag="OY092_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1077081.1"
                     /translation="MIHLIQISNINKSFKKKRVLKNISFDIEKGTCIALIGKNGAGKS
                     TLIDILIGNVNANSGEIFDKDKLLQSENRSIMFQKTMFPDQLKVIEIINLYQSFYENP
                     LPLEEIIELTKFDSSQLNQFVNKLSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEI
                     REYFWSIIENLKEDNRTILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQS
                     QITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITSNVNDTILYLQQLHINLDDIEIQKV
                     SIVDSYFNNKKQRGSNYDTKLLENRI"
     gene            5100..5831
                     /locus_tag="OY092_002157"
     CDS             5100..5831
                     /locus_tag="OY092_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1077082.1"
                     /translation="MILSYLKIEFKVIMRKKTTLILSILFPVIFYILFTSILELPEDV
                     KPKFYKEYMYSMTVYSLLSFSLLTFPLDIINEKQNEWRQRLMVTPFTFTSYYISKVVK
                     TMLQFAIAILVIFMVGHFYKGVAMSAVQWLESGIFLWLGASLLITFGILFSLLNDIQK
                     TSALANIVTIGLAVLGGLWFPINTFPNWLQHVAHVLPSYHLRKLGVDIASNHHINLIS
                     FAIILLYALGSILAVYCISHFKRAE"
     gene            5835..6926
                     /locus_tag="OY092_002158"
     CDS             5835..6926
                     /locus_tag="OY092_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCX1077083.1"
                     /translation="MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVF
                     SLSYLILVIVNNRLNTLMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKN
                     NVKKTATNFFILTMIICTIITYLFYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKE
                     IAEKNRHINTLIAEQERHRIGQDLHDTLGHVFASLSLKSELAYKLIDADVEKVKAELL
                     AINKLSRESLNKVREIIDDVKLPSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTK
                     QSMLVMITREAINNVIKHANASKVHGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQ
                     RVQHLNGTLAVDSTNGTKIIIEISTGGIA"
     gene            6923..7525
                     /locus_tag="OY092_002159"
     CDS             6923..7525
                     /locus_tag="OY092_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCX1077084.1"
                     /translation="MTSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIE
                     EYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYV
                     LKERSIEELVETINKVNNGEKEYSATLMTSFFVDKNPLTPKEQIVLREIGNGLSSKEI
                     SEKLFLTDGTVRNYTSVIIDKLFADNRFDAWKKANEKGWI"
     gene            complement(7638..7826)
                     /locus_tag="OY092_002160"
     CDS             complement(7638..7826)
                     /locus_tag="OY092_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HCX1077085.1"
                     /translation="MNISNENTVTLIAVIIAIIIGIFLQIFFKLPLIVTAVLSILLGI
                     FVGFIVYLIVSFYNKRKN"
     gene            7965..8498
                     /locus_tag="OY092_002161"
     CDS             7965..8498
                     /locus_tag="OY092_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HCX1077086.1"
                     /translation="MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLN
                     GKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKT
                     LTNQDVYLEYDKEKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVF
                     IEAQNKAKQQKLNIWSK"
BASE COUNT         3165 a         1101 c         1327 g         2911 t
ORIGIN      
        1 aaatgaatat aataataaga aaaataattc atctttatta ccaagttata ctataataga
       61 ttctaatgaa agtgaaaaga tgactaaaaa agaatttatt gatattccag ttttgtttga
      121 tgatgaaggg aattttagaa taaaacaagt tatagattat aaaaagataa taggtaaatc
      181 ttatgtgaat ggtaaatata ttgaaacgaa attaggtaag gttcattatt ctaaaactgg
      241 ttttcatgta gttccgtata ttaaaaagga gtgattaaat atgaatttac agtcatacat
      301 aggcaaatta gtcaaattaa cgcttactaa taataaaata ttaattggaa aagtgataga
      361 ctttgatgat aaagttgata attttgatgg ttataattcg atagaaattg atacaggtag
      421 aattacatat gatatatcag aaaataaaat taaaactatt gttttacaat aatagcatcc
      481 tttctacaca gataaagaga aagcggtgct attttttgcg cttttataac aactaaggat
      541 acaagacaca taacttcaac aatatcctca tctaaaccta ttgatttcct aagttcaatt
      601 ttaaacacaa agtttatttg taaagatgca cacctataaa aatcttaatc atcgaaatgt
      661 cacaaacatc tccatattaa aaacttaaat agtgcattcc atttaaacta aacatcgata
      721 ttcctaccaa aatagattta gtaattcaaa tgatattaca tcactttcat aaaataacta
      781 caaccatcat aatacttttc aaatctcgtc aaattaaagt aaatacagca caaattaaca
      841 tttttaaatt tataaaataa aacaagatac tcaataatct gtagtatctt gttttggaat
      901 aatgtaattt tatatcatca acggcttcaa atgagcagtt tcatatataa ataaacacaa
      961 ctactcaact gaacttgatt aattaataaa tgatttgcca gatgacatat aacagcatta
     1021 ttagattaat tctaatagtt tatttaaatt ttcttcggtt gtcgcccagc tggttgcgaa
     1081 tctaacaaca cgatgttgat catcgtattt ttcccaaaca gcaaatttaa ctttttgttc
     1141 taactctgct attttctcgt tacttaaaat aaaaaattgt tgattggttg gagaatcaaa
     1201 gtaaagacga tagcctttat ttttaaaccc gtctttcatc ttatttgcca tttcgatagc
     1261 atgtctgctt atattaaaat ataaattgtc cgtaaataat tctaaaaatt gtatgcctgt
     1321 taaccgtcct tttgctaaaa gggcaccgtg atgcttgatt cgagtggtaa attgtttcgg
     1381 ttcattattt ttcgtaaaaa caatggcttc cccgcataat gcacctatct tcgtaccacc
     1441 tatataaaat acatcacaat atttagcgat gtctttaata gtcatatctg attggtcact
     1501 catcaatcca taccctaatc gtgcaccatc cataaataat ggaagctgat attgcttaca
     1561 tactttgcat aactcttcca attctgattt agagtataat gtgccatatt ctgtaggatg
     1621 agaaatatat accattcctg ggaataccat atggtccttt ttaaaatcac ttttaaatgt
     1681 ctccatgtaa gtttcaacat ctgaagcact aacttttcct tccttagagg gtatagtaat
     1741 tactttatgt ccactatatt caattgcacc gccctcatgc acagcaacat gaccagtgtc
     1801 tgctgaaata accccttcgt aactttctaa cattgaatta ataacaacct gattggtttg
     1861 cgttccacct actaaaaaac ggatagtagc atttggacag tcaattgtat ccttaatctt
     1921 ttcaattgcc tgatttgtga attgatcaaa gccatatccc gaagcttgta caagatttgt
     1981 atctactaat ctttttaata ctttttcatg agcgccttct aaataatcat tttcaaatga
     2041 aatcactaca tttcccccta aaactaatat caacatttta ataagataaa ccaatttcaa
     2101 aactagttcg atatttaaaa tgtattatga atggttaaag tttgtatcgc attatcgcga
     2161 agttgaataa atatattata catcaaacaa tacattaata aaattaatta atttttaatc
     2221 atagcgactt ttcgtgctgg aacacatata ttaatgattg aattttactg ttaaaagttc
     2281 tatgatttag gaaatagaga aaagagggga tttaaatgga acaaattaaa cttaaaactt
     2341 ttacagctga gactttagaa ttattagaat caaatatcaa cgaattttta ggttctgaag
     2401 aagctacaaa tttgaaatta gtaaatatta caataaaaga aattgaagaa agaacatttc
     2461 caaataatga agaagagttt aatgcaatat taactctatc tgtaaataaa taatctggaa
     2521 agaaaggtac aaaagttttt tgtgcctttc tttataggag aaataaacta tgcaattttc
     2581 attttcaaat gatttaggaa cactttttac catcatttta gcaattgcct ttatcattaa
     2641 tttagttcta gcgtttatta ttattttttt agaaagaaat agacgtacag ccagttcaac
     2701 atgggcgtgg ttatttgtac tttttgtctt accattgatt ggttttatcc tttatttatt
     2761 ttttggaaga acggtttctg cgcgtaaact aaataaaaat aatgggaacg tgttaacaga
     2821 ttttgatgcg cttttaaagc agcagattga aagctttgat aaaggtaatt atggtacaga
     2881 taataaacaa gttcaaaagc accatgattt ggtacgtatg ttgttaatgg atcaagatgg
     2941 ctttttaact gaaaataata aaattgatca ttttattgac ggaaatgatt tatatgatca
     3001 agttttacaa gatattaaaa atgctaaaga atacatccat ttagagtatt atacattcgc
     3061 tctagatggc ttaggccaaa gaattttaaa agcgttagaa gagaaattga aacaaggtct
     3121 agaagtgaaa attttatatg atgacgttgg ttcaaagaaa gttaagatgg ctaattttga
     3181 tcattttaaa tcgttaggtg gagaagttga agcatttttt gcttctaaat taccgttatt
     3241 gaatttcaga atgaataata gaaatcatag aaaaatcatc gtaatcgatg gtcaactagg
     3301 ttatgtcgga ggatttaaca ttggtgatga atatctaggt ttaggaaaat tagggtattg
     3361 gagagatacg catttacgta tacaaggcga tgcggttgat gcactgcagt tgcgatttat
     3421 tttagactgg aattcgcaag cacatcgacc tcaatttgaa tatgatgaaa aatattttcc
     3481 taaaaagaat aaatcattcg gtaatgcgcc aatccagatt gctgcaagtg gtcctgccag
     3541 tgactggcat caaattgaat atggttatac aaaaatgatt atgagcgcta agaagtcggt
     3601 atatttgcaa tcgccttatt tcattccgga taactcatat ataaatgcca ttaaaattgc
     3661 agctaaatca ggggtagatg ttcatctgat gattccatgt aagccagatc atcctttagt
     3721 ttattgggcg acattttcaa atgcctctga cttattatca agtggtgtta aaatttatac
     3781 gtatgaaaat ggatttatac attctaaaat gtgcttaatt gatgatgaaa tcgtatcagt
     3841 cggcacagca aatatggact ttagaagttt tgaattaaat tttgaagtaa atgcctttgt
     3901 atatgatgaa aatcttgcta aagatttaag agcggcttat gaacatgata ttacaaaatc
     3961 aaaacaactt actgaagaat cttatgctaa tagaccattg tctgttaagt ttaaagaatc
     4021 gttagctaaa ttagtttcgc caattttata atttatttgt aaggagtctc gattatagag
     4081 gctcttttta tttctgcaat taatgactat aattgtatta tgtaaaccgt aaaagtgaca
     4141 aatgtcattt tgaaccaatg acaaagtatc ctattttaaa tcgaataaat ttactaatct
     4201 taaattaata aaatattaag aggtgattca tttgattcaa atatctaata ttaataaatc
     4261 atttaagaaa aagcgtgttt taaaaaacat ttcatttgat attgaaaaag gtacctgtat
     4321 cgcattaatc ggaaaaaatg gtgctggaaa atcaacgtta attgatatat taattggtaa
     4381 tgttaatgct aattctggtg agatatttga taaagacaag ttattacaaa gtgaaaatcg
     4441 cagtataatg ttccaaaaaa cgatgtttcc agatcaatta aaagttattg agattatcaa
     4501 cttatatcaa tcattttacg aaaatccatt accattggaa gaaataatag aactgacgaa
     4561 atttgattct agtcaactga accaatttgt aaataaactt tctggtggtc aacaacgatt
     4621 actcgatttt gtattatctt taatcggaca accacaattg atcttattag atgaaccaac
     4681 atcgactatg gatatagaaa ttagagaata tttttggtca attattgaaa atttaaaaga
     4741 agataatcga acgatactct atacatcgca ctatattgaa gaagtcgaac gtatgtcaga
     4801 caaaattatt ctcattgaaa atggagaaat aatacttaat gattcaacgt cacatattag
     4861 aaccaatcag caatctcaga ttacgttatc cgatgaatat ataagaaagt taaaactaga
     4921 taaagatgat ttagttattc aaaaaaatca taatggcact atcaaaatta ttacttcaaa
     4981 tgtaaatgat acgattttat atcttcaaca acttcatatt aatttggatg atattgaaat
     5041 acaaaaagtc tcaattgttg attcatactt caacaataaa aagcaaaggg gatctaatta
     5101 tgatactaag ttacttgaaa atcgaattta aagttataat gcgtaaaaaa acaacattaa
     5161 tattatctat tttatttcct gttatattct atatattatt tacttcgata ttggaattgc
     5221 cggaagatgt taaacctaaa ttttataaag agtatatgta tagtatgacg gtttatagtt
     5281 tgttaagttt tagtttacta acttttccat tagatattat taatgaaaaa caaaatgaat
     5341 ggcgccaaag attaatggta acaccattta cttttactag ttattatatt tcaaaagtag
     5401 tgaaaactat gctgcaattt gcaatagcga tattagttat ttttatggtt ggacattttt
     5461 ataaaggtgt tgcaatgagt gcagttcaat ggttagagtc aggaatattt ttatggttag
     5521 gtgcgtctct attaataact tttggcatat tattttcttt gttaaatgat attcaaaaaa
     5581 caagtgcttt agctaatatc gtaacaattg gtttagcagt attaggtgga ttgtggtttc
     5641 cgataaacac atttccaaat tggcttcaac atgttgctca tgttttaccg agctatcatt
     5701 tgcgtaaact aggtgtagat attgcttcaa atcatcatat caatttaata tcatttgcta
     5761 taatactctt gtatgcttta gggagtatat tagcagtata ttgtattagt cattttaaaa
     5821 gggcggaata aaatatgaaa tttttaaaag atacttcaat tgctgaaata tcgtctatac
     5881 tttatctgat ttttcctatt gccggtatat tttttaatga agtatatggt cccaaatggt
     5941 tgtatattat atcagtcatt gtcttttcgt tgtcgtatct tatattagtt atagtaaata
     6001 atagacttaa tacattaatg ttttacattt tgttgattat tcattatttt attatttgtt
     6061 attttgtttt cagtgtacat ccaatgctaa gtttgttttt cttttatagt gcttttgccg
     6121 ttccatttac ttttaaaaat aatgttaaaa aaacggcaac taattttttc atactaacaa
     6181 tgattatatg tacaataata acgtacttat tttataacaa ctattttgtt gcaatgatgg
     6241 tttattatgt cgttatatcg ttaataatgc tagataattt taaaaaaatg aaaaaccgtg
     6301 aatatcaaaa agaaatagca gaaaaaaata gacatattaa tacattaatt gctgaacaag
     6361 agcgacatag aattggtcaa gacttacatg atacgttagg gcatgtgttt gcaagtttat
     6421 cattaaaatc agaattagct tataaactaa tagatgctga tgtagaaaaa gtaaaagctg
     6481 aattattagc aattaataaa ttatctcgtg aatcattgaa caaagttcga gaaattattg
     6541 atgatgtaaa attaccatca tttattgaag agattgatag tatacgtaaa gttttaaaag
     6601 atgctgatat tgattttaca tttgaaaata aagaattagc gcaagtatta agtcctacta
     6661 aacaatctat gttagttatg attacgcgtg aagcgataaa taatgttatt aaacatgcaa
     6721 atgcttcaaa agttcatggt aaattaaaaa ctgtaaacaa tcataaatta ctgcttatga
     6781 ttgaagatga tggcaaaggt atcgatagtg attgtgaggt gaaaagtatt tcacagcgtg
     6841 tacaacattt aaatggaact ttagcagtcg actcaacaaa tggaactaaa ataatcattg
     6901 aaatctcaac aggaggaata gcatgacatc tttaattatt gcagaagatc aaaatatgtt
     6961 acgacaggca atggttcaat taattaaact acatggtgat tttgaaattt tagcagatac
     7021 tgataatggt ctcgatgcaa tgaaacttat tgaagaatat aatcctaacg ttgttatttt
     7081 agatatagaa atgccaggca tgactggact tgaagtttta gcggaaatta gaaaaaagca
     7141 tttgaatatt aaagtgatta ttgtaacaac ttttaaaaga ccgggatact ttgaaaaagc
     7201 agttgtgaat gatgtggatg catatgtttt aaaagaacgt tctatagaag aattggtgga
     7261 aaccattaat aaagtaaata acggagagaa agaatatagc gccacattga tgacttcatt
     7321 ttttgtagat aaaaacccat taacgcccaa agaacaaatt gtattaaggg aaattggcaa
     7381 tggtttaagt agtaaagaaa taagtgaaaa attatttttg acagatggaa cagttagaaa
     7441 ttatacatct gttataattg ataaattatt tgcagataat cgttttgatg cttggaaaaa
     7501 ggcaaatgaa aaaggctgga tctaaataca aacaaaaaag tattgagtgt tttgatttaa
     7561 gagacttgga aagtgagtca ataatcaaaa tcttactcaa tacttttatt ttggtactcg
     7621 caatttagat ttgttaacta attttttcgc ttattataaa acgaaacaat caagtaaacg
     7681 ataaagccta caaagatacc caataaaata gatagtactg ccgtcactat taatggtaat
     7741 ttgaaaaata tttgtaggaa aataccaatg ataattgcga taattactgc aattaatgtg
     7801 actgtatttt catttgaaat gttcatttat tttcactcct taacaataac attatatcat
     7861 gctatagctt tccaaaatat tgaaatatgt agatatggct attgacgata tttcttaact
     7921 tttatatgat taatcggaat gaaaaaagag aagtaggtgg caatatgaag tcaaataaat
     7981 cgcttgctat gattgtggta gccatcatta ttgtaggtgt attagcattt caatttatga
     8041 atcatacggg tcctttcaaa aaggggacga atcatgaaac tgtacaagat ttaaatggta
     8101 aagataaagt acatgttcaa agagttgtgg atggtgatac atttattgca aatcaaaatg
     8161 gtaaagaaat taaagttagg cttatagggg ttgatacgcc agaaacggtg aaaccgaata
     8221 cgcctgtaca accatttggc aaagaagcat caaattatag taagaagaca ttaacaaatc
     8281 aagatgttta tttagaatat gataaagaaa aacaagatcg ctatggtaga acattggcgt
     8341 atgtatggat aagtaaagat cgtatgtaca ataaggaatt agtggaaaag ggacttgcta
     8401 gagagaagta tttttcacca aatggcaaat atagaaatgt atttatagaa gcacaaaata
     8461 aagctaaaca acagaaatta aatatttgga gtaaataatt aaat
//
LOCUS       DAKPJH010000105         8479 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.105, whole genome shotgun sequence.
ACCESSION   DAKPJH010000105 DAKPJH010000000
VERSION     DAKPJH010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8479
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.105"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..329
                     /locus_tag="OY092_002162"
     CDS             <1..329
                     /locus_tag="OY092_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077087.1"
                     /translation="QEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKE
                     VKDLKPSKEDNKDDKKDEDKNKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKA
                     NDKHQS"
     gene            467..766
                     /locus_tag="OY092_002163"
     CDS             467..766
                     /locus_tag="OY092_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077088.1"
                     /translation="MHEQDFRILEGQDITLPELGRELENITGRTIADSTGEIKRVIAH
                     LPNFESDTDTFVATYRLNHQQDFIDATFTALKSDRARLKEVPVHVELISYISKSK"
     gene            846..1388
                     /locus_tag="OY092_002164"
     CDS             846..1388
                     /locus_tag="OY092_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077089.1"
                     /translation="MIYCETERLILRDWHEDDLLPFQKMNANYDVRKYFPSLLSYRRS
                     ELDMRTMDAVIKDYGIGLFAVEDKESHQWIGFIGLNYIPETSDYPFKELPLYEIGWRL
                     LPEFWGKGLATEGAKVALKLAEQHQIYDVYSFTAEANKASQRVMEKIGMTVYDHFELP
                     NLSKYHLLKRQVRYYINLRK"
     gene            complement(1484..2049)
                     /locus_tag="OY092_002165"
                     /pseudo
     CDS             complement(1484..2049)
                     /locus_tag="OY092_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499247.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
     gene            complement(2051..2509)
                     /locus_tag="OY092_002166"
     CDS             complement(2051..2509)
                     /locus_tag="OY092_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HCX1077090.1"
                     /translation="MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPP
                     HVSTLYVDDGPDAVDYKIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKN
                     IQQLLDKRYMNAQIRKQGGRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD"
     gene            complement(2512..3195)
                     /locus_tag="OY092_002167"
     CDS             complement(2512..3195)
                     /locus_tag="OY092_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077091.1"
                     /translation="MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKV
                     ASKTSAAISNTASDVKEYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKD
                     ADKMNKILQKNIEKRHKEEQKAREKNEIQRVKDMKKSQKYEEKAGLTPNKLDEKTEKK
                     GDKLAEKNRKEIAKMNKKLQKNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQ
                     QNKENNTEA"
     gene            complement(3367..4242)
                     /locus_tag="OY092_002168"
     CDS             complement(3367..4242)
                     /locus_tag="OY092_002168"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCX1077092.1"
                     /translation="MFIIELIKGIILGVVEGLTEFAPVSSTGHMILVDDMWLKSSEFL
                     GSQSAFTFKIVIQLGSVFAAAWVFRERFLEILHIGKHKHVEGENDQQRRSKPRRLNLL
                     HVLVGMVPAGILGLLFDDFIEEHLFSVPTVMIGLFVGAIYMIIADKYSAKVKNPQTVD
                     QINYFQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKAASDFTFIMAVPIMLAAS
                     GLSLLKHYQDIQIADIPFYILGFLAAFTVGLIAIKTFLHLINKIKLIPFAIYRIVLVI
                     FIAILYFGFGIGKGI"
     gene            4461..6092
                     /locus_tag="OY092_002169"
     CDS             4461..6092
                     /locus_tag="OY092_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HCX1077093.1"
                     /translation="MKKLTTILFQYKIFPVLMFMVSTGLGILVITQNILIADFLAKII
                     RHQFQGLWIVLFILLGVLLLRATVQFLNQWLGDTLAFKVKHMLRQRVIYKNNGHPIGE
                     QMTILTENIDGLAPFYKSYLPQVFKSMMVPLIIIIAMFFIHFNTALIMLITAPFIPLF
                     YIIFGLKTRDESKDQMTYLNQFSQRFLNIAKGLVTLKLFNRTEQTEKHIYDDSTQFRT
                     LTMRILRSAFLSGLMLEFISMLGIGLVALEATLSLVVFHNIDFKTAAIAIILAPEFYN
                     AIKDLGQAFHTGKQSEGASDVVFEFLEQPNNNNEFLLKYEENQKPFIQLTDISFRYDD
                     SDRLVLNDLNLEIFKGDQIALVGPSGAGKSTLTHLIAGVYQPTIGTISTNKRDLNIGI
                     LSQQPYIFSASIKENITMFKDIENNTIEEVLDEVGLLDKVQSFTQGINTIIGEGGEML
                     SGGQMRRIELCRLLVMKPDLVIFDEPATGLDIQTEHMIQNVLFQHFKDTTMIVIAHRD
                     NTIRHLQRRLYIENGRLIADDRNISVNITENGDDL"
     gene            6089..7762
                     /locus_tag="OY092_002170"
     CDS             6089..7762
                     /locus_tag="OY092_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding/permease
                     protein"
                     /protein_id="HCX1077094.1"
                     /translation="MKTRLKFQVDKDLLLAIVVGVCGSLVALAMFFLSGYMVTQSALG
                     APLYALMILVVTVKLFGFLRAITRYVERLISHKATFTMLRDIRVQFFGKLVNVIPNVY
                     RKLSSSDLISRMISRVEALQNIYLRVYYPPVVIGLTALVTVIVLAFISISHALLIMVS
                     MLFTLLVVPWLSSKKARTLKKHAANEQARFLNHFYDYKAGMDELRRFNQINHYRDNLM
                     AKLNHFDKLQLKEQRFLTIYDFILNIIAMLSIFGSLVLGLIQINAGQLNIIYMTSIVL
                     MVLTLFEQAVPMTNVAYYKADTDQALHDINEVISVPSTNGKNRLNDKYDATNIYEVKD
                     ASFKYWNQQTYVLSDINFNVNRGEKIAIVGPSGSGKSTLLQIMAGLYQLDSGSIRFEN
                     MDMFEIDDKDKFESLNVLLQSQQLFDGTIRQNLFTDEKDEAVQAIFKQLDLEHLALER
                     QIDLDGHTLSGGEIQRLAIARMLLKDTVSTWILDEPTTALDKQNSLKVMDLIEAHAET
                     LIVATHDLTLLSRFETIIVMINGKIVEKGNYQQLLANQGALWNMIQYNA"
     gene            complement(7889..8332)
                     /gene="mgrA"
                     /locus_tag="OY092_002171"
     CDS             complement(7889..8332)
                     /gene="mgrA"
                     /locus_tag="OY092_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MgrA"
                     /protein_id="HCX1077095.1"
                     /translation="MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVL
                     TILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKS
                     ETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK"
BASE COUNT         2846 a         1272 c         1440 g         2921 t
ORIGIN      
        1 gccaagagaa agccactctg gaaaaggaca tcgataattt acaaaaagaa aataaagaat
       61 taaaagataa aaaagaaaag cttcaacaag aaaaagaaaa attagcagat aagcaaaaag
      121 accttgaaaa agaagtgaaa gatttaaaac cttcaaaaga agataacaag gatgataaaa
      181 aagacgaaga caaaaataaa gataaagata aagaggcatc acaagataag caatcaaaag
      241 atcaaactaa gtcatcggat aaagataatc acaaaaagcc tacatcaaca gataaagatc
      301 aaaaagctaa tgacaaacac caatcataat tgaattgctt tcttgttata gatgaaaggt
      361 acagcgtttt aaaccttatt ttaagggtat gtattaatta aaatgtggtc atgattgaaa
      421 cagaatgtaa aaatagacaa cgtaattaat aaaggagaga aacggcatgc atgaacaaga
      481 ttttagaatt ttagagggtc aagatattac tttgccagaa ttaggtagag aattagaaaa
      541 tattacagga cgcacgattg ctgattctac tggcgaaatt aagcgtgtaa ttgcacattt
      601 accaaacttt gagtccgata cagatacttt tgttgctaca tatcgtttaa accatcaaca
      661 agattttata gatgctactt ttactgcgct gaaatcagat agagcacgtt taaaagaagt
      721 gccagttcat gttgaactta taagttatat ttctaaatca aaataaactg ctatctaaaa
      781 cgcaaagttg atcaaaatat cgattttgtg ttttttattg agaaattata taggagtgtc
      841 aatcgatgat ttattgtgaa acagagcgtt taatattaag agactggcat gaagatgatc
      901 tgttaccttt tcaaaaaatg aatgcgaatt atgacgtacg taaatatttt ccaagtttat
      961 tgagttatcg tcgttcagaa ttagatatga gaactatgga tgcggttatt aaagattatg
     1021 gcattggatt atttgctgta gaagataaag agtcccatca atggataggc tttataggtt
     1081 tgaattatat tccagaaaca agcgattatc catttaaaga attaccgctt tatgaaatag
     1141 gttggcgctt gttgccagaa ttttggggaa aaggattagc aactgaaggc gcaaaggtag
     1201 cgttgaagtt agcagaacaa catcaaatat acgatgtcta tagttttaca gcagaagcaa
     1261 ataaagcttc acaacgtgta atggaaaaaa ttggcatgac agtgtatgat catttcgaat
     1321 tacccaatct aagtaagtat catttattaa aaaggcaagt gcgctattac attaatcttc
     1381 gaaagtgaaa aatttataca taagcgtaac aaacacccct aatattgttt agctgatgat
     1441 aacaatatta ggggtgtttg tttatttttt aaccttagaa tgattaatcg tatgaacgag
     1501 tacctagagg tttgaaattc aatatagatt ctattaatga ttccttagtg tcacataacg
     1561 gtgcaagtgc acgatactta ggatcaataa aaccttcctc aatcatatgg tcaatcattg
     1621 tttgtagtgg attgaaaaag ccattaatat tataaatggc aataggcttt tcatggatac
     1681 caatttgagc ccaactatac atttcgaaaa attcttctag tgaacctgcg ccgccgggag
     1741 ccatgacaaa tgcatctgca agttctgcca ttttattttt acgttcatgc atagaatcaa
     1801 ctagaattaa ttcagttaaa cgttggcttg tgatttcatg ttcatctaac attttaggca
     1861 tgacgccaat agctttgccg ccatgatcta atacaccatc ttgaatggca cccataatac
     1921 caattgaccc tgcaccaaat actaattcat aaccttgttc agcaaaatat ttacctaaat
     1981 cgtatgcttt ttgtacatat gaagggtcat gaccttgctt gcaccacaat aaactgcgat
     2041 tcgtttcatg ttaatccagc tccttaattc gatgaatgac ttttaatagt gattgttcaa
     2101 acactttttg atcttgcttt gtaaaaggtg ggggaccttt gtggcgacca ccttgttttc
     2161 taatttgtgc attcatatat cgtttatcta atagttgttg aatatttttg gaattgtata
     2221 tcttcccatt atgatgcatg acaattaaga ctttgtcgac taataaactt gcgagtccat
     2281 aatcttgagt gactacgata tcatctttcg ttgataattg aacaattttg taatcaactg
     2341 catctggtcc atcatcaaca tataatgttg atacatgcgg gggatataat tggttcgaaa
     2401 aatggctgaa gctccgaata attgtcacaa aaatgcctgt ctcagttgtt aaatctataa
     2461 tagaatcaac aacaggacaa gcatctccat caataataat atgtgtcaca attatgcctc
     2521 agtattgttt tctttatttt gttgagaggc gcttttggca acataatctt tatatttttt
     2581 aaatgacttg atgcgtgctt tatcagcttc ttgttggcgt ttttgttctt ctttgtgtcg
     2641 tttttcaata tttttttgta actttttatt cattttagcg atttctttgc gatttttttc
     2701 agctagttta tcgccttttt tctcagtttt ctcatctaat ttattaggtg ttaagcctgc
     2761 tttttcttcg tatttttgtg attttttcat atctttaaca cgttgtattt cattcttttc
     2821 gcgggctttt tgctcttctt tatgacgctt ttcgatattt ttttgaagta ttttattcat
     2881 tttatcagcg tctttacgat tttgtttagc taatttttcg ccttttttct caatataggc
     2941 aggatcatgt tctctagcaa actttttaag ttcacgctta ttttcaaaat cttgtttttt
     3001 atcgccgaca tattctttaa catcactcgc tgtgttactg attgctgcag atgtttttga
     3061 agcaacttta cttgtagcat ctgtaacttt ttgtacgtcc ggatgttgtt tgatacgttt
     3121 acgttcaaca attaacggta ccaatacaat tggtaataca ttaatcataa atttgatgac
     3181 ttttttctta tccatagatc ttgcctccat aattacttta ttaattttac ataccctatg
     3241 atacatcaat ataaacgatg atagtagtga atcactatta agtatttcag atgtttttta
     3301 aaagaagaca ataaaaactg ccaatcaagt ggttccttaa ttgacagtct atattttaaa
     3361 aggaaattaa atacctttac caatgccaaa tccgaagtaa agtatagcaa taaagattac
     3421 taatacaatt ctgtaaatgg caaatggaat tagtttgatt ttgttaatta gatgcaagaa
     3481 tgttttgatt gcaattagtc caacagtaaa tgcagctaaa aagcctaaaa tataaaaagg
     3541 tatatcagca atctgaatat cttgataatg ttttaataaa gataaaccac tagctgctaa
     3601 cataattgga acagccataa taaatgtgaa gtctgatgca gctttatgat ttaatttcat
     3661 taatacccca gttgaaattg ttgagcctga acggctgaaa ccaggccaca tagctactgc
     3721 ttgagagata ccaattacaa acgcttggaa ataattgatt tgatctactg tttgtgggtt
     3781 tttaacttta gctgagtatt tatcagcaat aatcatatag atagcaccta cgaataagcc
     3841 aatcataaca gttggcacac taaataaatg ttcttcgatg aaatcatcaa atagtaagcc
     3901 taaaatacct gctggcacca tacccactaa tacatgtaat aaatttaaac gtcttggctt
     3961 tgaacgtctt tgttgatcgt tttctccttc aacatgtttg tgtttaccaa tatgtaaaat
     4021 ctctaagaag cgttcgcgga atacccatgc tgctgcaaag acggatccta attggatgac
     4081 gattttaaat gtaaatgctg attgagaacc taaaaattca gatgatttta accacatatc
     4141 atcaactaga atcatatgtc cagtagagga aacaggtgca aattctgtta atccttcgac
     4201 gacccctaag ataatacctt ttattaattc aatgataaac ataatgtacc cactttcatt
     4261 actcaattta atttatttaa atatcaaaat taccatatca tgatagcata ttcatttaaa
     4321 gacatgctag ttatagttat aatactagac taaagatgta tatattcatt ttcttttaca
     4381 tgtaaaacta caatatttta ttgagctatt taatttgatt ttaaggaaaa ccttttataa
     4441 taggtttagg tgatataatt gtgaaaaaat taacaacaat actgtttcaa tataaaattt
     4501 ttccggtact catgttcatg gtcagtactg gtctcggcat actcgttata acgcaaaata
     4561 ttttaatagc agatttttta gctaaaatta taagacatca atttcaaggt ttatggattg
     4621 tattatttat tttattaggt gttttacttt taagagcaac tgtgcaattt ctaaatcaat
     4681 ggttaggtga tacattagca tttaaagtta agcatatgct tagacagcgg gttatttata
     4741 aaaataatgg tcatccaatc ggtgaacaaa tgactatact cacagaaaac attgatggtc
     4801 tagcaccttt ttataagagt tatttgcctc aagtgttcaa atcaatgatg gttccgctca
     4861 tcataatcat tgcaatgttt ttcatccatt tcaataccgc attaattatg ttaataactg
     4921 caccatttat tcctttgttt tatattattt tcggtttgaa aacgcgagat gagtcaaaag
     4981 atcaaatgac ttatttgaat caatttagtc aacggttttt aaatattgct aaaggtttag
     5041 tgacgttaaa gctatttaat cgtacagagc aaacagagaa gcatatttac gacgatagta
     5101 ctcagtttag aactttaaca atgcgcattt tacgcagtgc ttttttatcg ggattaatgc
     5161 tcgaatttat aagtatgtta ggtattggat tggttgcatt ggaagcaacg ctaagcttag
     5221 tagtatttca taatattgat tttaaaactg cggcaattgc gattatttta gcgcctgaat
     5281 tttataatgc aattaaggac ttagggcaag cgttccatac tggaaaacaa agtgaaggtg
     5341 ccagtgacgt tgtgtttgag tttttagaac aaccgaacaa taataatgaa tttctattaa
     5401 agtatgagga aaatcaaaag ccatttattc agttaacaga catatcattt cgatatgatg
     5461 attctgatag attggtatta aatgatttaa atttggaaat atttaaaggt gatcaaattg
     5521 cacttgtagg tccaagcggg gcaggtaaat ccactttgac acatcttatt gcaggtgttt
     5581 atcagccaac aataggtact ataagtacaa acaagcgtga tttaaatata ggaatactta
     5641 gtcaacagcc atatattttc agtgcttcta taaaagagaa tattacgatg tttaaagata
     5701 tagaaaataa tactattgaa gaagtgctag acgaagtagg tttattagac aaagtgcaat
     5761 ctttcacaca aggcattaac acaataatag gtgaaggagg cgaaatgtta tctggtggac
     5821 agatgagacg catagaactt tgccgtcttt tagttatgaa gccagatctc gttatatttg
     5881 atgagcctgc aactggttta gatattcaaa cagaacacat gattcagaac gttctgtttc
     5941 aacattttaa agatacaacg atgattgtca ttgcacatag agataataca attcgccatt
     6001 tacaacgacg tttgtatata gaaaatggaa gactgattgc tgatgatcgc aatatttcag
     6061 taaatataac agaaaatggt gatgacttat gaaaacacga ctaaaatttc aagtagataa
     6121 ggatttattg ttagctatag ttgttggtgt ttgtggaagt ttagttgcgc tcgccatgtt
     6181 tttcttaagt ggttatatgg tgacacaaag tgcacttggt gcgccactat acgctctgat
     6241 gattttagtc gtaacagtaa aattgtttgg gtttttaaga gctattactc gatacgtaga
     6301 gcgtcttatt tctcataaag ctacatttac aatgctacgt gatattcggg tacagttttt
     6361 cggtaaatta gtaaatgtca ttcctaatgt ttaccgtaaa ctgagttcta gtgatttaat
     6421 ttcacgtatg attagtcgtg ttgaggcatt acaaaatata tatttacgtg tttattatcc
     6481 accagtcgtt atcggtttga cagcgctagt tacagtaata gttttggcgt tcatttcaat
     6541 cagccatgcg ctattgatta tggttagcat gttgtttact ttactcgttg ttccttggtt
     6601 aagctcaaaa aaagcacgta ctttaaagaa acatgcagct aatgaacagg cccgtttttt
     6661 aaatcatttt tatgattata aagctggtat ggatgaacta cgtcgattta atcaaattaa
     6721 tcattatcga gataatttga tggctaaatt aaatcatttt gataaattac aacttaaaga
     6781 gcaacgcttt ttaacgattt atgattttat attaaatatt attgctatgc tttcgatttt
     6841 tggtagttta gttctaggat taattcaaat taatgcaggc caactaaata ttatttatat
     6901 gacgagtata gttttaatgg tcttaacttt atttgaacaa gctgtaccaa tgacaaatgt
     6961 cgcgtattat aaagcggata ctgaccaagc attgcatgat attaatgaag tgatatctgt
     7021 accttctact aatggaaaaa accgtcttaa tgataagtat gatgcaacga acatttatga
     7081 agttaaggac gctagtttta agtattggaa ccagcaaacg tatgtgttgt cggatattaa
     7141 ttttaatgtt aatagaggcg aaaagattgc gattgtgggt ccttctggtt caggaaaaag
     7201 tacattacta caaattatgg ctgggttata tcaattagat agtggctcta ttcgtttcga
     7261 aaatatggat atgtttgaaa tagatgacaa agataagttt gaatcgttaa atgtcttgct
     7321 acaatctcaa caattatttg atggtacaat acgtcaaaat ttatttaccg atgaaaaaga
     7381 tgaagcggtg caagcaatat ttaagcaatt agatttagaa catttggcac tagaacgtca
     7441 aattgactta gatggtcata cattatctgg cggagaaatt cagcgtttag cgattgcgag
     7501 gatgttatta aaagatactg tatcaacatg gattttagat gaaccaacaa ctgcattaga
     7561 taaacaaaat agtttaaaag ttatggattt aattgaagca catgcagaaa cattaattgt
     7621 tgctacacac gatttaactt tattgtcacg tttcgagacc atcattgtga tgataaatgg
     7681 taaaatagtt gaaaagggaa actatcaaca attactcgct aatcaaggtg ctttatggaa
     7741 tatgattcaa tataatgcat aaaaaaactg cttgataggc taagaaacct ttcaagcagt
     7801 tttttaacta acaagcttac gcgtgctaat tgtttttcta ttcttaataa attctaaaca
     7861 ttactttaat tgtcatgaca aaagttaatt atttttcctt tgtttcatca aatgcatgaa
     7921 tgactttacc taataagcga ttaagttctt taacttcatc ttgagataaa gaagaagctg
     7981 aagcgacttt gtcagatgca ttacttaatt ctggtctaat agtttcactt ttgtcagtca
     8041 agtgaataaa tacttcacgt tgatcgactt cggaacgttc acgcttaatt aagtctactt
     8101 gttccattcg ttttaataat ggtgatactg taccagtatc gagtgctaat tcagttacga
     8161 ctttcttgac gtttacagga gattcatccc ataaaattgt taagacaaga aattgtgggt
     8221 atgttagatt gtacttctta aaaactttgt tagagtagta gcgattaact tgtctttgag
     8281 cattgtacaa actaaagcat agctgttctt ttaaattatg ttgatcagac attaaagttc
     8341 tcctccagac atactatccg tttttttctc ttttcggatt ggtaatcatt aaaaagttga
     8401 ttgtttatta attcacaact ttctttgatt caatgccatg ctaaaattaa agtatgttta
     8461 aagtttagaa gatattttt
//
LOCUS       DAKPJH010000106         8460 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.106, whole genome shotgun sequence.
ACCESSION   DAKPJH010000106 DAKPJH010000000
VERSION     DAKPJH010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8460
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.106"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(140..247)
                     /locus_tag="OY092_002172"
     CDS             complement(140..247)
                     /locus_tag="OY092_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077096.1"
                     /translation="MVLLAFVTTIHDTDDGRFFNEHKHANNKLLKRSLI"
     gene            complement(284..607)
                     /gene="isdG"
                     /locus_tag="OY092_002173"
     CDS             complement(284..607)
                     /gene="isdG"
                     /locus_tag="OY092_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdG"
                     /protein_id="HCX1077097.1"
                     /translation="MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTL
                     EQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIG
                     YSYMK"
     gene            complement(626..1360)
                     /gene="srtB"
                     /locus_tag="OY092_002174"
     CDS             complement(626..1360)
                     /gene="srtB"
                     /locus_tag="OY092_002174"
                     /EC_number="3.4.22.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HCX1077098.1"
                     /translation="MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQ
                     KFQMLMSKHQAHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFER
                     EHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDN
                     KYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKII
                     TLSTCEDAYSETTKRIVVVAKIIKVS"
     gene            complement(1422..2387)
                     /gene="isdF"
                     /locus_tag="OY092_002175"
     CDS             complement(1422..2387)
                     /gene="isdF"
                     /locus_tag="OY092_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000594537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin ABC transporter permease protein IsdF"
                     /protein_id="HCX1077099.1"
                     /translation="MIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTG
                     SNEAVDSIIDLRLPRILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRA
                     LCMLFIPQLYFYLPLLSFIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLE
                     ILTQNPLMKIPQGLTMKIWSDVYILAVSALLGLILTLLLSTKLNLLNLDDVQARSIGF
                     NIDRYRWLTGLLAVFLASATVAIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGA
                     WLLLVADLLGRVIQPPLEIPANAILMIVGGPMLIYLICQSQRNRI"
     gene            complement(2400..3278)
                     /gene="isdE"
                     /locus_tag="OY092_002176"
     CDS             complement(2400..3278)
                     /gene="isdE"
                     /locus_tag="OY092_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     IsdE"
                     /protein_id="HCX1077100.1"
                     /translation="MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALT
                     MTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDE
                     MQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFDRKAQAKELNDHLNSVKQKIENKA
                     AKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLN
                     INPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDA
                     DKAMTQLYDLFYKDKK"
     gene            complement(3275..4351)
                     /gene="isdD"
                     /locus_tag="OY092_002177"
     CDS             complement(3275..4351)
                     /gene="isdD"
                     /locus_tag="OY092_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated surface determinant protein IsdD"
                     /protein_id="HCX1077101.1"
                     /translation="MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQ
                     PEAKDKTELTTSIFDEKIKENKALELVIFNQENKNVTEEQQLVDEKAQLISDMTGKIY
                     LQVKLKGQIDKEQLVFQNDKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEK
                     KNLDNKEMVYSIHFKEKKVQHDDAKEVPSKHQSQENNQDQLKKDIDDKKDSQKSDIKE
                     RRTSLFTEKGLNDIPVQKDKVQQDSNKKIENERPKASGTLKVENNPSTVKKVENNHKE
                     QPKHKDEKSKKEKKKVVEKEKALPAFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFA
                     AGIVLATILLISAHLYSRKRGNQV"
     gene            complement(4351..5034)
                     /gene="isdC"
                     /locus_tag="OY092_002178"
     CDS             complement(4351..5034)
                     /gene="isdC"
                     /locus_tag="OY092_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdC"
                     /protein_id="HCX1077102.1"
                     /translation="MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTN
                     DTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTS
                     EFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKN
                     SASGSDKGSDGTTTGQSESNSSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFV
                     RKKSKGNVE"
     gene            5243..6295
                     /gene="isdA"
                     /locus_tag="OY092_002179"
     CDS             5243..6295
                     /gene="isdA"
                     /locus_tag="OY092_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored heme-scavenging protein IsdA"
                     /protein_id="HCX1077103.1"
                     /translation="MTKHYLNSKYQSEQRSSAMKKITMGTASIILGSLVYIGADSQQV
                     NAATEATNATNNQSTQVSQATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYY
                     FQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIV
                     VPQINYNHRYTTHLEFEKAIPTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEK
                     VKPTVTTTSKVEDNHSTKVVSTDTTKDQSQTQSARTVKTTQTAQEQNKVQTPVKDVAT
                     AKSESNSQAVSDNKSQQTNKVTKQNETPKQASKAKELPKTGLTSVDNFISTVAFATLA
                     LLGSLSLLLFKRKESK"
     gene            6498..8432
                     /gene="isdB"
                     /locus_tag="OY092_002180"
     CDS             6498..8432
                     /gene="isdB"
                     /locus_tag="OY092_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdB"
                     /protein_id="HCX1077104.1"
                     /translation="MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAQAAEET
                     GGTNTEAQPKTEALASPTTTTEKAPETKPVANAVSVSNKEVEAPTSETKEAKEVKEVK
                     APKETKAVKPAAKADNNTYPILNQELREAIKNPAIKDKDHSAPNSRPIDFEMKKENGE
                     QQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKD
                     YAYIRFSVSNGTKAVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEK
                     LLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKKKLEDTKKALDEQVKSAITEFQNV
                     QPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYWK
                     DFMVEGQRVRTISKDAINNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDK
                     EAFTKANTDKSNKKEQQDNSAKKEATPATPSKPTPSPVEKESQKQDSQKDDNKQLPSV
                     EKENDASSESGKDKTPATKPAKGEVESSSITPTKVVSTTQNVAKPTTASSKTTKDVVQ
                     TSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLPL
                     MALLALSSIVAFVLPRKRKN"
BASE COUNT         2989 a         1468 c         1129 g         2874 t
ORIGIN      
        1 tcatattatt tcaaattgta taaatttctt ttatcgatac tactactata aatcatacgc
       61 cccaaaatat cattattaat tcttttcttc ttcaaaataa atcaaaatga tataattgat
      121 gattattttc aaagcacatt caaatcaaac tacgctttag caatttgttg ttagcatgtt
      181 tgtgttcatt aaaaaaacga ccatcatcgg tatcatgtat ggtcgttaca aaagctaaca
      241 ataccaattg tcataacaag tactgcaacc tctttaaatt caattatttc atgtaactat
      301 agcctatatc atatgtaatt actttgttat tgataatcgg gctactttca tcttcatttt
      361 tacttctaac atgtttatgt gctgctttaa agacatcaga ttttaaccaa tccgtaaaag
      421 cttgctttga tttccaaact gttaaaattt tcacttcatc aaaatcttct tgttctaaag
      481 tttgtgtaac aaacatgcca tcaaagcctt ctaatgtttc aatcccatgt ctcgtgtaaa
      541 atcgttctat aatatctttt gctgttcctt ttgttaacgt cagcctattt tctgccatga
      601 atttcataat tatcctcttt tctgtttaac ttaccttaat tatttttgcg acaacaacaa
      661 ttcttttcgt tgtttcacta tatgcatctt cgcacgttga taaagttatt attttatctt
      721 ttaccgttac attaacatct gaattaatta cagatttacg ttttgtctca tctaaaaatt
      781 gttgataatc ttgatcattt tcaaaatctg tacgtatgta attatcttta gtagtagttt
      841 tatatgcact aaatacttgc aattgatatt taccatattt attgtcaaat tcaattatct
      901 tgtgtttttc ataaaaagat tgctttaaat aatcttctaa cacatcaaac atcgtattat
      961 caccgacatg gtgcccatat aaaatagtat tatgatttaa attcttcaat tcatttctaa
     1021 aatccataaa aatactacct ttacgtcgat gttctcgctc aaaatctaaa tttaaataat
     1081 cgtgatttgt cttaccttgt agtactggat aatttaatga tgttcctgat aattttatcc
     1141 atccaacaat gtctttattt attttttcaa gtgattcaaa ttgtggtctc acatgtgctt
     1201 gatgtttgct catcagcatt tgaaattttt gttgtaattt ctcataattt gcgcgttctt
     1261 gcttgtcttc aatatatgtt tgaacaattt tgtaaccaaa aatgataata attacaacca
     1321 ataaaatttg tacaatagtt aaaaatcgct tcattctcat aaaaatcctc ttttattaac
     1381 gacgtttctt cagtcactac taaaccagtt attgtaccgt tttagattcg atttcgttga
     1441 ctttgacaaa ttaagtaaat tagcattgga ccaccgacaa tcattaaaat agcattggct
     1501 ggaatttcta aaggaggctg tatcactcgt cctaataaat cagccactaa caatagccat
     1561 gcaccaataa ctgtagaaaa tggaataagt actctgtaat tgcccccaac tagctttcta
     1621 accacatgtg gcacaataat acctaaaaag gctagttgtc caacaatcgc aacagttgca
     1681 cttgctaaaa atactgctaa taaacctgtt aaccatctgt aacgatcaat attgaaaccg
     1741 atacttcgcg cttgtacgtc atctaaattt agtaaattca atttagtgga caatagtaat
     1801 gttaatatta atcccaataa tgctgatact gctaatatgt atacgtcgct ccatattttc
     1861 attgttaagc cttgaggaat tttcattaaa gggttttgag ttaaaatttc taaaacacca
     1921 tttaataata cgaataacgc aacacctact aatatcatac ttacagcatt gaatctaaat
     1981 ttagaatgca acaatataat tattaaaaat ggtattaaac ctccaataaa acttaataat
     2041 ggtaagtaaa agtacaattg tggaataaac aacatacaaa gtgctctcat tataagtgca
     2101 cctgaagaaa cgccaatgat attcgcctct gccaaaggat tttgtagtgc tgcttgtaat
     2161 aatgctccag aaactgctaa cattgcgcca accattaatg caattaatat acgtggcaat
     2221 cgcaaatcaa tgattgaatc cactgcttca ttgctaccag ttgtaaattt tgtaaatagg
     2281 tcattaaatg acaatttaat tgtaccggtt acaaacgaaa tataagcagt tgcgattaaa
     2341 atgactaaca aacataaaaa tagtagtttc tttttatttt ttatcatcat atcaactcac
     2401 tattttttat ccttataaaa taaatcatat aattgagtca ttgccttatc agcatcaaca
     2461 tttgctgtaa taccgaatgg cacttcctct aagtcataaa catgattatt tttcacagct
     2521 ttaaaatgtt tccaaatatc attttgttta aattcttttt gaaacatttt cttaacttct
     2581 tcaggcattc cgtgtggtaa tcgtaaaata atatctggat ttatattcaa caaattttca
     2641 gtattagacg aaatatattg acgatctttc actttaataa cattttctcc acctgctatt
     2701 ttaactaaat caccaatata tgatttatca gttgctacta aatagctacc aggtacaccc
     2761 attaatatta atactttggg atgtttcttt tgtttagctg ctttattttc aattttttgc
     2821 tttacagaat ttaaatggtc atttaattct tttgcttgtg ctttacgatc aaattgatca
     2881 cctaattgtg taatcgactt ttgcatccct tttaaactat caaaatcata aaagtagcct
     2941 ttcatattta attgtttgta aaatggttgc atttcatctt taatcgttga cacactcaaa
     3001 acatgtgttg gttttaactt tttaacagct tcaacattcg gctccattgg ttgaccaatt
     3061 tccggtacat ctttatagcg attaggcaat gtcttatatg acgtgggttt gccgacaatt
     3121 ggtaaatcca atttgtccaa tgtcattgtc aatgcgacag ttgttggtac gattctgaat
     3181 tcgccggatt tagttgattc ttgagaactg gaagattgac agctggttaa gataacgacg
     3241 cttatcacta aaatggttaa atactttatg attctcaaac ttggttacct ctctttctgc
     3301 tgtataaatg tgccgaaata agtaaaatgg ttgctaacac aatgccagct gcaaataaca
     3361 tatattgctt tttatgattt ggttcatcaa gttctttaat atcactagat aattgactac
     3421 tattcttgct atcatcatct ctattaaaag ctggtaacgc tttttctttt tcaactactt
     3481 ttttcttttc cttttttgat ttttcatctt tatgtttcgg ttgctctttg tgattatttt
     3541 caaccttttt tactgttgaa ggattatttt caacttttaa tgtacctgat gctttaggtc
     3601 gctcattttc aatcttttta ttactgtctt gttgcacttt atctttttgt acaggaatat
     3661 catttaagcc tttttcagta aaaaggctag tacgtctttc cttaatgtct gatttttgac
     3721 tatctttttt gtcatcaata tcttttttaa gctgatcttg attattttct tgactttgat
     3781 gttttgaagg cacttctttt gcatcatcat gttgtacttt tttctcttta aaatgaatag
     3841 aatacaccat ttctttgtta tctagatttt tcttttcagc caacgtttta acatgcatat
     3901 tgattttatc catatgctgt tcaattaaaa ttcttactat tgtgtcatcc ttttcatctt
     3961 ttataacaaa aggaaattct tcatttttgt cattttgaaa aacaagttgt tctttatcaa
     4021 tttgaccttt tagctttact tgcaagtaaa ttttaccagt catatctgaa atcaattgcg
     4081 ccttttcgtc aactagttgt tgttcctcag ttacattttt attttcttga ttaaaaatta
     4141 ctaactctaa cgctttattc tcttttatct tttcatcaaa aattgatgta gttaattctg
     4201 ttttatcttt tgcttcaggt tgattaaatt tggctgatgg atattttatc tcatcagcca
     4261 acacgctacc aatcattgtt gtatatgtaa gtatacctaa gctaataata gctataatag
     4321 attttgtagc aatttgttta acatttctca ttattccaca ttgcctttag atttttttct
     4381 aacaaacaat gtgattgcga ttaataatgc taaggatgca actggtattg catatatata
     4441 tgcaggtgta ccagcatttg tttgtggatt ttctactttg tctttattcg aactgttaga
     4501 ttcactttga ccagtagtcg ttccatcaga tcctttgtca ctacctgaag cagaattttt
     4561 atcatcttta cctggtgcat tagcacctgc tacatcagtt ggtccattaa atttatatgt
     4621 aatgttgtaa tgatggtcat atttgaatgg cttaccattt actttttcat cgatataaac
     4681 gtcaattttt ccatctattt taccgttcaa cttacttact tcaaattcag aagtgcgttc
     4741 atctttggca gtgtttttac taataatatt ttctttatgt ccttcgatac tcattccagt
     4801 aatccaatga ctgtggttga cagttatttg aacatacaat ttaccatttt tcttaatgta
     4861 ctttgccggt ttattaaaat agtcattagc aattgacgtg tcattggtat tgtatttgta
     4921 aacctcataa ttcaaagtac cgctatctgc ggcatttgca gaattactga atgtcgcgat
     4981 gatgataatt aacgctaaaa tcgttgtatt aaaaactttt aaaatatttt tcaaaacata
     5041 atcctccttt ttatgattgc ttttaagtct ttactaaaat cataaataat aatgattatc
     5101 attgtcaata tttattttat aatcaattta ttattgttat acgaaaatag atgtgctagt
     5161 ataattgata accattatca attgcaatgg ttaatcatct catataacaa cacataattt
     5221 gtatccttag gaggaaaaca acatgacaaa acattattta aacagtaagt atcaatcaga
     5281 acaacgttca tcagctatga aaaagattac aatgggtaca gcatctatca ttttaggttc
     5341 ccttgtatac ataggcgcag acagccaaca agtcaatgcg gcaacagaag ctacgaacgc
     5401 aactaataat caaagcacac aagtttctca agcaacatca caaccaatta atttccaagt
     5461 gcaaaaagat ggctcttcag agaagtcaca catggatgac tatatgcaac accctggtaa
     5521 agtaattaaa caaaataata aatattattt ccaaaccgtg ttaaacaatg catcattctg
     5581 gaaagaatac aaattttaca atgcaaacaa tcaagaatta gcaacaactg ttgttaacga
     5641 taataaaaaa gcggatacta gaacaatcaa tgttgcagtt gaacctggat ataagagctt
     5701 aactactaaa gtacatattg tcgtgccaca aattaattac aatcatagat atactacgca
     5761 tttggaattt gaaaaagcaa ttcctacatt agctgacgca gcaaaaccaa acaatgttaa
     5821 accggttcaa ccaaaacctg ctcaacctaa aacacctact gagcaaacta aaccagttca
     5881 acctaaagtt gaaaaagtta aacctactgt aactacaaca agcaaagttg aagacaatca
     5941 ctctactaaa gttgtaagta ctgatacaac aaaagatcaa agtcaaacac aaagtgctcg
     6001 tacagtgaaa acaacacaaa cagctcaaga acaaaataaa gttcaaacac ctgttaaaga
     6061 tgttgcaaca gcgaaatctg aaagcaacag tcaagctgta agtgacaata aatcacaaca
     6121 aactaacaaa gttacaaaac aaaacgaaac gcctaaacaa gcatctaaag ctaaagaatt
     6181 accaaaaact ggtttaactt cagttgataa ctttattagc acagttgcct tcgcaacact
     6241 tgccctttta ggttcattat ctttattact tttcaaaaga aaagaatcta aataaatcat
     6301 cgtcacactc ataacttaat atatttttta ttttaaattt tatttaacct atgtcataga
     6361 tatttcataa tctataacat aggttatttt tttataaaat aacgttgcaa ttaactacca
     6421 tttcaatgta caatacaagt aatcaattga taatgattat cagttgataa tatacaatta
     6481 ggagttgttt ctacaacatg aacaaacagc aaaaagaatt taaatcattt tattcaatta
     6541 gaaagtcatc actaggcgtt gcatctgtag caattagtac acttttatta ttaatgtcaa
     6601 atggcgaagc acaagcagct gaagaaacag gtggtacaaa tacagaagca caaccaaaaa
     6661 ctgaagcact tgcaagtcca acaacaacaa ctgaaaaagc tccagaaact aaaccagtag
     6721 ctaatgctgt ctcagtatct aataaagaag ttgaggcccc tacttctgaa acaaaagaag
     6781 ctaaagaagt taaagaagtt aaagccccta aggaaacaaa agcagttaaa ccagcagcaa
     6841 aagccgataa caatacatat cctattttga atcaggaact tagagaagcg attaaaaacc
     6901 ctgcaataaa agataaagat catagcgcac caaactctcg tccaattgat tttgaaatga
     6961 aaaaagaaaa tggtgagcaa caattttatc attatgccag ctctgttaaa cctgctagag
     7021 ttattttcac tgattcaaaa ccagaaattg aattaggatt acaatcaggt caattttgga
     7081 gaaaatttga agtttatgag ggtgacaaaa agttgccaat taaattagta tcatacgata
     7141 ctgttaaaga ttatgcttac attcgcttct ctgtatcaaa tggaacaaaa gctgttaaaa
     7201 ttgttagttc aacacacttc aataacaaag aagaaaaata cgattacaca ttaatggaat
     7261 tcgcacaacc aatttataac agtgcagata aattcaaaac tgaagaagat tataaagctg
     7321 aaaaattatt agcaccatat aaaaaagcga aaacactaga aagacaagtt tatgaattaa
     7381 ataaaattca agataaactt cctgaaaaat taaaggctga gtacaagaag aaattagagg
     7441 atacaaagaa agctttagat gagcaagtga aatcagctat tactgaattc caaaatgtac
     7501 aaccaacaaa tgaaaaaatg actgatttac aagatacaaa atatgttgtt tatgaaagtg
     7561 ttgagaataa cgaatctatg atggatactt ttgttaaaca ccctattaaa acaggtatgc
     7621 ttaacggcaa aaaatatatg gtcatggaaa ctactaatga cgattactgg aaagatttca
     7681 tggttgaagg ccaacgtgtt agaactataa gcaaagatgc tataaataat actagaacaa
     7741 ttattttccc atatgttgaa ggtaaaactc tatatgatgc tatcgttaaa gttcacgtaa
     7801 aaacgattga ttatgatgga caataccatg tcagaatcgt tgataaagaa gcatttacaa
     7861 aagccaatac cgataaatct aacaaaaaag aacaacaaga taactcagct aagaaggaag
     7921 ctactccagc tacgcctagc aaaccaacac catcacctgt tgaaaaagaa tcacaaaaac
     7981 aagacagcca aaaagatgac aataaacaat taccaagtgt tgaaaaagaa aatgacgcat
     8041 ctagtgagtc aggtaaagac aaaacgcctg ctacaaaacc agctaaaggt gaagtagaat
     8101 caagtagtat aactccaact aaggtagtat ctacgactca aaatgttgca aaaccaacaa
     8161 ctgcttcatc aaaaacaaca aaagatgttg ttcaaacttc agcaggttct agcgaagcaa
     8221 aagatagtgc tccattacaa aaagcaaaca ttaaaaacac aaatgatgga cacactcaaa
     8281 gccaaaacaa taaaaataca caagaaaata aagcaaaatc attaccacaa actggtgaag
     8341 aatcaaataa agatatgaca ttaccattaa tggcattatt agctttaagt agcatcgttg
     8401 cattcgtatt acctagaaaa cgtaaaaact aataaatcgt ctttatattt aattattaaa
//
LOCUS       DAKPJH010000107         8404 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.107, whole genome shotgun sequence.
ACCESSION   DAKPJH010000107 DAKPJH010000000
VERSION     DAKPJH010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8404
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.107"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..649
                     /locus_tag="OY092_002181"
     CDS             <1..649
                     /locus_tag="OY092_002181"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCX1077105.1"
                     /translation="MTDFGHRALSDPEFNEQYKEQMKQFKQRILEDDTFAKQFGDLGN
                     VYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMF
                     QFYVQDGKLSCQLYQRSADIFLGVPYNIASYALLTHLIAKECGLEVGEFVHTFGDAHI
                     YSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYEDLEIVDYESHPAIKAPIAV"
     gene            849..1328
                     /locus_tag="OY092_002182"
     CDS             849..1328
                     /locus_tag="OY092_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HCX1077106.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVTSSVEGKLDEKNTIPHTFLHLIRKK"
     gene            1343..2182
                     /gene="fakB2"
                     /locus_tag="OY092_002183"
     CDS             1343..2182
                     /gene="fakB2"
                     /locus_tag="OY092_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB2"
                     /protein_id="HCX1077107.1"
                     /translation="MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGVSYVDQVDI
                     TSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQA
                     SQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIG
                     QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEF
                     IGDHEIKSVGVTHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV
                     LKK"
     gene            2268..2801
                     /gene="msrA"
                     /locus_tag="OY092_002184"
     CDS             2268..2801
                     /gene="msrA"
                     /locus_tag="OY092_002184"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCX1077108.1"
                     /translation="MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYE
                     QVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYH
                     DEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQR
                     GSGRKAFIESHWGNQNA"
     gene            2794..3222
                     /gene="msrB"
                     /locus_tag="OY092_002185"
     CDS             2794..3222
                     /gene="msrB"
                     /locus_tag="OY092_002185"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HCX1077109.1"
                     /translation="MLKKDKSELTDIEYIVTQENGTEPPFMNEYWNHFAKGIYVDKIS
                     GKPLFTSEEKFHSECGWPSFSKALDDDEIIELVDKSFGMVRTEVRSEESNSHLGHVFN
                     DGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLISHFDK"
     gene            3234..3734
                     /locus_tag="OY092_002186"
     CDS             3234..3734
                     /locus_tag="OY092_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCX1077110.1"
                     /translation="MFKKLFGKGKEVQKDIAIYAPLTGEYVKIEDIPDPVFAQKMMGE
                     GFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVL
                     VSSGDEVNVGDPLVRFNLEFINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKV
                     IDVTMN"
     gene            3734..3955
                     /locus_tag="OY092_002187"
     CDS             3734..3955
                     /locus_tag="OY092_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HCX1077111.1"
                     /translation="MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILS
                     DYIETHGDFTLPMSVFDDLYEEYTEWLKF"
     gene            4144..5634
                     /locus_tag="OY092_002188"
     CDS             4144..5634
                     /locus_tag="OY092_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HCX1077112.1"
                     /translation="MDDKQHTSSSDDERAEIATSNQDQQTNSSKRVHLKRWQFISILI
                     GTILITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYYKKQDSDKLSKA
                     AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPA
                     ERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREK
                     IHVKSVEYKKKDKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLD
                     EAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGSASASEVF
                     TGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPD
                     VTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQFDQALENQV
                     KAFQQTNKLEVTGEFNKETNNKFTELLVEKANKHDDVLDKLINILK"
     gene            6031..6540
                     /locus_tag="OY092_002189"
     CDS             6031..6540
                     /locus_tag="OY092_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077113.1"
                     /translation="MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEE
                     DIAKDYLYVLEENNKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAA
                     TELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPF
                     YAYYKNLKE"
     gene            6552..7622
                     /locus_tag="OY092_002190"
     CDS             6552..7622
                     /locus_tag="OY092_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HCX1077114.1"
                     /translation="MKKIAFTGGGTVGHVSVNLSLIPTALSQGYEALYIGSKNGIERE
                     MIESQLPEIKYYPISSGKLRRYISLENAKDVFKVLKGILDARKVLKKEKPDLLFSKGG
                     FVSVPVVIAAKSLNIPTIIHESDLTPGLANKIALKFAKKIYTTFEETLNYLPKEKADF
                     IGATIREDLKNGNAHNGYQLTGFNENKKVLLVMGGSLGSKKLNSIIRENLDALLQQYQ
                     VIHLTGKGLKDAQVKKSGYIQYEFVKEELTDLLAITDTVISRAGSNAIYEFLTLRIPM
                     LLVPLGLDQSRGDQIDNANHFADKGYAKAIDEEQLTAQILLQELNEMEQERTRIINNM
                     KSYEQSYTKEALFDKMIKDALN"
     gene            7639..8253
                     /locus_tag="OY092_002191"
     CDS             7639..8253
                     /locus_tag="OY092_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HCX1077115.1"
                     /translation="MSQWKRISLLIVFTLVFGIIAFFHESRLGKWIDNEVYEFIYSSE
                     SFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPVLK
                     NIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLKRLNQGNSKGILIGLCAA
                     MILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN"
BASE COUNT         3131 a         1159 c         1519 g         2595 t
ORIGIN      
        1 tatgacagat ttcggacatc gtgcattgag tgatcctgaa tttaacgaac aatataaaga
       61 acaaatgaaa caatttaagc aacgtattct tgaagatgat acatttgcga agcaattcgg
      121 tgatttagga aatgtttatg gtaaacaatg gcgagattgg gttgataaag atggtaatca
      181 ttttgatcaa cttaaaacag taattgaaca aattaagcat aatccagatt caagacgaca
      241 catcgtatct gcatggaatc caacagaaat tgatacaatg gcacttccgc cttgtcatac
      301 aatgttccag ttttatgtcc aagatggtaa gttaagttgc cagttatacc aacgtagcgc
      361 agatatcttt ttaggtgtgc catataatat cgcaagctac gctttattga cacaccttat
      421 tgccaaagaa tgtggacttg aagtaggtga atttgtgcat acatttggag atgcacatat
      481 ttattcaaat catattgatg caattcaaac tcaattagcg cgtgaaagtt tcaatcctcc
      541 aacattaaaa attaacagtg acaagtctat tttcgacata aattatgaag atttggaaat
      601 tgttgactat gaatcgcatc cagcaataaa agctccaata gcagtgtagt cattgcatag
      661 ttagctaacc atatagacat caaaatgaca tcatagtatt ttcaagtgca aaaaagtact
      721 tttttgtgtt aaacgttttc ataaattatg caaaatcatt atttctatca cactttatga
      781 taaaaattgt gttaaattaa agataactta gtaataaaaa atgaaatgat agaagaagga
      841 ggataattat gactttatcc attctagttg cacatgactt gcaacgagta attggttttg
      901 aaaatcaatt accttggcac ctaccaaatg atttgaagca tgttaaaaaa ctatcaacag
      961 gtcatacttt agtaatgggt cgtaagacat ttgaatcgat tggtaaacca ctaccgaatc
     1021 gtcgaaatgt tgtacttact tcagatacaa gtttcaacgt agagggcgtt gatgtgattc
     1081 attctattga agatatttac caactaccgg gacatgtttt catatttgga gggcaaacat
     1141 tatttgaaga aatgattgat aaagtggacg acatgtatat tactgttatt gaaggtaaat
     1201 tccgtggtga tacgttcttc ccaccttata catttgaaga ctgggaagtt acctcttcag
     1261 ttgaaggtaa actagatgag aaaaatacaa ttccacatac ctttctacat ttaattcgta
     1321 aaaaataagg gggaaaacga ccatgacaaa acagattata gtaacagact caacatccga
     1381 tttatctaaa gaatatttag aagcaaacaa cattcatgta attcctttaa gtttaactat
     1441 tgaaggagtt tcatacgttg accaagtaga tattacatca gaagaattta ttaatcatat
     1501 tgaaaatgat gaagatgtaa agacaagtca gccagccata ggtgaattta tatctgctta
     1561 tgaagaacta ggaaaagatg gctccgaaat cataagtatt catctttctt caggattaag
     1621 tggtacatat aacactgctt accaagcaag tcaaatggta gatgctaatg taactgttat
     1681 tgattcaaaa tctatttctt ttggtttagg gtatcaaata caacacctag tagagcttgt
     1741 aaaagaaggt gtctcaactt ctgaaatagt taaaaagtta aatcatttaa gagaaaacat
     1801 taaattattt gtagttatag ggcaattgaa tcaattaatt aaaggtggca gaattagtaa
     1861 aacaaaaggt ttgattggta atcttatgaa aatcaaacca attggtacac tagatgatgg
     1921 tcgcttagag cttgtgcaca atgcgagaac tcaaaattct agtatccaat acttgaaaaa
     1981 ggaaattgct gaatttatag gagatcatga aatcaaatcc gttggtgtca cacatgctaa
     2041 cgttattgaa tatgttgata aattgaagaa agtttttaat gaagcttttc atgtgaataa
     2101 ttacgatata aatgtaacta caccagttat ttctgcacat actggtcaag gtgcgattgg
     2161 cctcgtagtc cttaagaagt aaatttaatc ttttcagtgt taattacttc catttcaatc
     2221 ctttatagac taaatttata attagataga tagaggaggt aattcatatg acaaaagaat
     2281 atgcaacatt agcaggagga tgtttctggt gcatggttaa accatttaca tcatatccag
     2341 gcatcaagtc agtcgtatct ggttatagtg gcggtcatgt tgacaaccca acttatgaac
     2401 aggtatgtac gaatcaaacc ggccatgtcg aagcagtaca aattacgttt gatccagagg
     2461 ttacttcctt tgaaaatata ttagacatat atttcaaaac atttgaccca accgatgatc
     2521 aagggcaatt tttcgataga ggcgaaagct atcaaccagt cattttctat catgatgagc
     2581 atcagaaaaa ggctgctgag tttaaaaagc aacaattaaa tgaacaaggt attttcaaga
     2641 aaccagtgat tacacctatt aaaccatata aaaatttcta tccagctgaa gactaccatc
     2701 aagattatta caaaaagaac ccggtacatt attaccaata tcaacgtggt tcaggtagaa
     2761 aagcgtttat agaatcacat tgggggaatc aaaatgctta aaaaagataa aagcgaacta
     2821 acagatatag aatatattgt tacacaagaa aatggtactg aaccaccatt tatgaatgaa
     2881 tattggaatc attttgctaa agggatttac gtagataaga tttctggtaa acctttattt
     2941 acatctgaag aaaagtttca ttctgagtgc ggatggccta gcttttccaa agcgcttgat
     3001 gacgatgaaa ttatagaatt agtcgacaaa tcatttggta tggtaagaac tgaagtccgt
     3061 tcagaagaat caaatagtca tttaggacac gtctttaatg atggacctaa agaaagtggc
     3121 ggcttaagat actgtatcaa ttccgctgca attcaattta ttccatatga aaaattagaa
     3181 gaattgggtt atggcgattt aatatcacat tttgataagt aggagtggaa agtatgttta
     3241 aaaaattatt cggaaaaggc aaagaagttc agaaagatat cgcaatttat gcaccattaa
     3301 ctggagaata cgtgaaaatt gaagatattc cagatcctgt attcgcacaa aaaatgatgg
     3361 gcgaaggttt tggtattaat ccaactgaag gagaagttgt gtctccaatt gcaggacgtg
     3421 ttgacaatgt ctttccaact aagcatgcga ttgggttaaa agcagataac ggattagaat
     3481 tattagttca tatcggttta gacacagttc aattagacgg tgaaggattt gaagtgttag
     3541 tgtctagtgg tgacgaagtt aacgtcggag atccattagt aagattcaac cttgaattta
     3601 ttaataataa cgctaaatct gttatttcac caattataat tacaaacact gatcaagcag
     3661 cttcaattaa tatttatgat gaaaatgctg tgattaaagg tgaaacaaaa gtgattgatg
     3721 tgacaatgaa ctaatgaaaa actattcgtt ttatcaattt gtcatgacag ttcgtggtcg
     3781 acacgacgat aaaggtcgtc tagcagaaga gatatttgac gatcttgctt tcccaaaaca
     3841 cgatgatgat tttaacatac tgtctgatta tattgagaca catggtgatt tcacattgcc
     3901 aatgtctgta tttgatgatt tatatgaaga atatacggaa tggctaaaat tttaacataa
     3961 tatttaataa tagttagaac cagggtgatg caatttgtta tcctggtttt aatttaaaat
     4021 aaactaagtt gtgactaaaa attaatcaat tatagtgaaa tatggtgcgc tatcttgcat
     4081 aaattgatat gattaactac acagaattta aaagtacata atacataata aggaagtgat
     4141 acaatggatg ataagcaaca cacatcttca tccgatgatg aacgcgctga aattgcaaca
     4201 agcaatcaag accaacaaac taattcatcg aaacgcgttc acttaaaacg ttggcaattc
     4261 atatcaattt taattggtac aatcctaata acagctgtca tcacagttgt tgcatatatt
     4321 tttataaatc aaaaaataag tggtttaaac aaaactgatc aagcaaactt aaataaaatt
     4381 gaaaatgtgt ataaaatctt aaatagtgat tattacaaaa aacaggactc tgacaagtta
     4441 agtaaagctg caattgatgg catggtcaaa gaattaaaag atccttattc tgaatattta
     4501 acaaaagaac aaacgaaatc ctttaatgaa ggtgtttcag gtgattttgt aggtattggt
     4561 gcagaaatgc aaaagaaaaa tgatcaaatt atggttacta gtcctatgaa gggatctcca
     4621 gcagaacgtg ctggcattcg tcctaaagat gtcattacta aagtaaatgg aaaatcaatt
     4681 aaaggtaaag cattagatga agttgtcaaa gatgttcgtg gtaaagaaaa cactgaagta
     4741 actttaactg ttcaacgagg cagtgaagaa aaagacgtta agattaaacg tgaaaaaatt
     4801 catgttaaaa gtgttgagta taagaaaaaa gataaggttg gagttattac tattaataaa
     4861 ttccagaatg atacatcagg tgaattgaaa gatgcagttc ttaaagctca caaagatggt
     4921 ttgaaaaaga ttgttttaga tttaagaaat aatcctggtg gactactaga tgaagctgtt
     4981 aaaatggcaa atatttttat cgataaagga aaaactgttg ttaaactaga aaaaggtaaa
     5041 gatactgaag caattcaaac ttctaatgac tcgttaaaag aagcgaaaga catggatata
     5101 tccatcttag tgaatgaagg ttcagctagc gcttctgaag tatttactgg tgcgctaaag
     5161 gactataata aagctaaagt ttatgggtca aaaacattcg gtaaaggtgt cgtacaaact
     5221 acaagagagt ttaaggacgg ttcattgtta aaatatactg aaatgaaatg gttaacgcca
     5281 gatggtcatt atattcacgg taaaggcatt aaaccagacg ttactattga cacacctaaa
     5341 tatcaatctt taaatgtcat tcctaatacg aaaacattta aagttggaga cgatgataaa
     5401 aatattaaaa ctattaaaat tggtttatca gctttaggtt ataaagttga taatgaatca
     5461 acgcaatttg atcaagcttt agaaaatcaa gttaaagctt tccaacaaac gaataaactc
     5521 gaggtaactg gtgaatttaa taaagaaacg aataataaat ttactgagtt attagttgaa
     5581 aaagctaata aacatgatga tgttctcgat aaattgatta atattttaaa ataagtgata
     5641 cacactgcta aaattgtttt attatgttaa tgacacgcct cctaaatttg caaagatagc
     5701 aatttaggag gcgtgtttat ttttattgac gtctaactct aaaagatata aattagacat
     5761 ttacaaatga tgtaaataac gcaatttcta tcatcgctgt taacaattca tgctttaata
     5821 tagtatgagc atatactttt taaatagtat tattcactag ttttaacaat cgattaattg
     5881 gtatatgata cttttattgg ttatttttat cccatagtgt gataattact atttttcatt
     5941 cataataaag gtttaaagca tgttaatagt gtgtaagatt aacatgtact gaaaaacatg
     6001 tttaacataa cgatataagg agtgacgtac atgatccgtc taggtaaaat gtcagattta
     6061 gatcaaatct taaatctagt agaagaagca aaagaattaa tgaaagaaca cgacaacgag
     6121 caatgggacg atcagtaccc acttttagaa cattttgaag aagatattgc taaagattat
     6181 ttgtacgtat tagaggaaaa taacaaaata tatggtttta ttgttgtcga ccaagaccaa
     6241 gcagaatggt atgatgacat tgactggcca gtaaatagag aaggcgcctt tgttattcat
     6301 cgattaactg gttcgaaaga atataaagga gctgctacag aattattcaa ttatgttatt
     6361 gatgtagtta aagcacgtgg tgcagaagtt attttaacgg acacctttgc gttaaacaaa
     6421 cctgcacaag gtttatttgc caaatttgga tttcataagg tcggtgaaca attaatggaa
     6481 tatccgccat atgataaagg tgaaccattt tatgcatatt ataaaaattt aaaagaatag
     6541 aggtaatatt aatgaagaaa atcgcattta ccggaggggg aacagttgga cacgtatcag
     6601 taaatttaag tttaattcca actgcattat cacaaggtta tgaagcgctt tatattggtt
     6661 ctaaaaatgg tattgaaaga gaaatgattg aatcacaact accagaaatt aagtattatc
     6721 ctatttcaag tggtaaatta agaagatata tttctttaga aaatgccaaa gacgtattta
     6781 aagtattgaa aggtattctt gatgctcgta aagttttgaa aaaagaaaaa cctgatctat
     6841 tattttcaaa aggtggattt gtatctgtgc cagttgttat tgcagccaaa tcattaaata
     6901 taccaactat tattcatgaa tctgacttaa caccaggatt agcgaataag atagcactta
     6961 aatttgccaa gaaaatatat acaacatttg aagaaacgct aaactaccta cctaaagaga
     7021 aagctgattt tattggagca acaattcgag aagatttaaa aaatggtaat gcacataatg
     7081 gttatcaatt aacaggcttt aatgaaaata aaaaagtgtt actcgttatg ggtggaagct
     7141 taggaagtaa aaaattaaat agcattattc gcgaaaactt agatgcatta ttacaacaat
     7201 atcaagtgat acatttaact ggtaaaggat taaaagatgc tcaagttaaa aaatcaggat
     7261 atatacaata tgaatttgtt aaagaggaat taacagattt attagcaatt acggacacag
     7321 taataagtag agctggatca aatgcgattt atgagttctt aacattacgt ataccaatgt
     7381 tattagtacc attaggttta gatcaatccc gaggcgacca aattgacaat gcaaatcatt
     7441 ttgctgataa aggttatgct aaagcgattg atgaagaaca attaacagca caaattttat
     7501 tacaagaact aaatgaaatg gaacaggaaa gaactcgaat tatcaataat atgaaatcgt
     7561 atgaacaaag ttatacgaaa gaagctttat ttgataagat gattaaagac gcattgaatt
     7621 aatggggggt aatgctttat gagtcaatgg aaacgtatct ctttgctcat cgtttttaca
     7681 ttggtttttg gaattatcgc gtttttccac gaatcaagac ttgggaaatg gattgataat
     7741 gaagtttatg agtttatata ttcatcagag agctttatta cgacatctat catgcttgga
     7801 gctactaaag taggtgaagt ctgggcaatg ttatgtattt cattacttct tgtggcatat
     7861 ctcatgttaa agcgccacaa aattgaagca ttattttttg cattaacaat ggcactatct
     7921 ggaattttga atccagtact aaaaaatata ttcgatagag aaagacctac attgctgcgt
     7981 ttaattgata taacaggatt tagttttcct agcggtcatg ctatgggatc aactgcatat
     8041 tttggaagtg gtatctatct attaaaacga ttaaatcaag gtaattcaaa aggtattctt
     8101 atagggttat gtgcagctat gattttattg atttccatat cacgtgtata tctaggtgtg
     8161 cattatccaa cagatattat tgccggtatt attggtggcg tattttgcat tattttatca
     8221 acgttattac ttagaaataa attaatcaat taaatagtaa aaaaacaaaa gcagtaaacc
     8281 taaagtgtcg taagggttta ctgcttttat aaaacgttgt tataacgtat attgtctttt
     8341 acgggcatat aaaaggggaa tatttgaaaa tgaccaatcc aacaagaacg aaacgttgtg
     8401 gggg
//
LOCUS       DAKPJH010000108         8363 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.108, whole genome shotgun sequence.
ACCESSION   DAKPJH010000108 DAKPJH010000000
VERSION     DAKPJH010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8363
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.108"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(139..465)
                     /locus_tag="OY092_002192"
     CDS             complement(139..465)
                     /locus_tag="OY092_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HCX1077116.1"
                     /translation="MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNE
                     RLIMNVDMNGQFYYRSISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSDNVEMFVEYV
                     KQHMIV"
     gene            complement(529..1272)
                     /locus_tag="OY092_002193"
     CDS             complement(529..1272)
                     /locus_tag="OY092_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HCX1077117.1"
                     /translation="MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYD
                     NSDSNSASIDRLLKMKEIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHI
                     DKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELFRNLKCYLNMCQLSLEELY
                     VLGILNLHKGQLTVKELQGEFHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIK
                     REKFSKVTMLIQACYNYLEKGIQVKLNNK"
     gene            complement(1298..3253)
                     /locus_tag="OY092_002194"
     CDS             complement(1298..3253)
                     /locus_tag="OY092_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077118.1"
                     /translation="MTDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDV
                     KRNDVTVIMLNDLYQIDGHDDSVCCVVEVSAKTFLKFMNANYMMRGKILTNEVASTFR
                     ILIKYLIYSKIKQQPYNANDKIINYMCVELMSLNTYDGSRHLVAEEVHDYLTNNHHKK
                     INRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEYCLIDILTSKKPIEEIASS
                     HGFNHYSRFIHLFKETYGDTPKLIRKRYSPTSHSIYHSQLVEIDKNIIELFDDTNQSS
                     SSMREIDIPFEPTKRSQMYQPKNIYIKGSNFYWMDYYTIKQIIQRLSVNPENLHIIVT
                     IDTSNELSIEQITLLLQKIVNYNVNVVFRIKHEYKELLTSTERGKIEKLVATIFNMTF
                     ESNRCKIGFLINDLNTTAIQKLKRLIDNYIGVFELIYHLEPNELNVRYYKEIDHLIDY
                     FILPLRQIEQVSIARSKIICDVDLINENDDLKEKITMSDINKITELLTNYTKFRGLIM
                     HMSIISEASKEINLTRLSIFIFIINILNQLRGIVIYQNDTMIVTKFKHEVQCVICLPA
                     ALLNENSDAIRLSCKSLQQFSHAKTKQIVLSIDKDNHTSENGVLVNDIMQQHSYWKAN
                     FIERNIYDHSLMVSSNSIVHLKYHLEI"
     gene            3863..4726
                     /locus_tag="OY092_002195"
     CDS             3863..4726
                     /locus_tag="OY092_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077119.1"
                     /translation="MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYS
                     YTYTIDAQGNYHYTWKGNWHPSQLNQDNGYYSYYYYNGYNNYNYNNYNNGYSYNNYSR
                     YNNYSNNNQSYNYNNYNSYNNYSNNNQSYNYNNYNSYNTNSYRTGGLGASYSTSSNNV
                     QVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVFDRVGGKIGSTWGNASNWANAAA
                     RAGYTVNNTPKAGAIMQTTQGAYGHVAYVESVNSNGSVRVSEMNYGYGPGVVTSRTIS
                     ASQAAGYNFIH"
     gene            complement(4744..4986)
                     /locus_tag="OY092_002196"
     CDS             complement(4744..4986)
                     /locus_tag="OY092_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077120.1"
                     /translation="MTKLIENLKASIFVSTLTKNLSMYSRFDVPKFGCVNGCMLFILY
                     YRVNRIGENRNFEIFTNSIFFIEIKKANKALETLLA"
     gene            complement(5160..6560)
                     /gene="nhaC"
                     /locus_tag="OY092_002197"
     CDS             complement(5160..6560)
                     /gene="nhaC"
                     /locus_tag="OY092_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HCX1077121.1"
                     /translation="MMTRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYA
                     TWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDL
                     LNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
                     FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSND
                     KQIQTLLSELAQIYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHF
                     KMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEK
                     AGCLEVLLTTISKGIHSVGSLICVTVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQ
                     VSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVGEFFIWTVPCYLCAIIAIIY
                     GFTGIGIKKSSNSRLT"
     gene            complement(6655..7737)
                     /locus_tag="OY092_002198"
     CDS             complement(6655..7737)
                     /locus_tag="OY092_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HCX1077122.1"
                     /translation="MKIAIVGSGNGAVTAAVDMVSKGHDVKLYCRNQSISKFQNAIEK
                     GGFDFNNEGDERFVKFTDISDDMEYVLKDAEIVQVIIPSSYIEYYADVMAEHVTDNQL
                     IFFNMAAAMGSIRFMNVLEDRHIETKPQLAEANTLTYGTRVDFENAAVDLSLNVRRIF
                     FSTYDRSCLNDCYDKVSSIYDHLVKEESLIKTNLENGNPEVHPGPTLLNVGRIDYAGE
                     FALYKEGITKHTVRLLHAIELERLNLGRRLGFELSTAKESRIERGYLERDKEDEPLNR
                     LFNTSPVFSQIPGPNHVESRYLTEDIAYGLVLWSSLGRVIDVPTPNIDAVIVIASTIL
                     ERDFFEEGLTVESIGLDKLDLEKYLK"
     gene            7985..>8363
                     /locus_tag="OY092_002199"
     CDS             7985..>8363
                     /locus_tag="OY092_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HCX1077123.1"
                     /translation="MTTEMNDVTNHQPNRKSNDENIMAMLIYLLSLFTSIIGPLIIWL
                     LKKDESKLVDRAGKNYLNYTISYIIWSIILVVITFIGVFLIATDIDFIIIIGFIITFI
                     GILSIFAFSILSFVFTIIACVKYY"
BASE COUNT         2881 a         1503 c         1052 g         2927 t
ORIGIN      
        1 tatattaatt tgatggcttg ctcacgaaat ttataaaata taaaaaaaga agagctttaa
       61 atcataacgc atgccattta tctttaaatg caatgagtta tcattcaaac tcttcttatc
      121 aacctacata cattgacatt atactatcat atgttgtttt acatattcaa caaacatttc
      181 aacgttatca cttttaatat catgcattgg gacattacca atattaaatt tgaacattat
      241 agtttgacca tcataatcta tcttctctat ttcattataa ctaatacttc tataataaaa
      301 ttggccattc atatctacat tcataattaa tctttcattt gttgctataa atgccccttc
      361 aaattcattc tcaccttgaa cttgatactc aattattcct agcactgacg gacccttttt
      421 ttcagttgga aataaatcat ttggattcac attatctaaa atcataatat ccctcccact
      481 taaaactata aactattctt cataggtata tgaaatacaa gtgattaact atttattatt
      541 aagcttaact tgtattccct tttcaagata attataacat gcttgaataa gcatagtgac
      601 tttagaaaac ttttctctct tgattgttac aataacacgc ctttcatcta attcacatct
      661 ctctttttta actaatcctt tcaaaattaa acactttaaa atcggactaa ccgcaaatat
      721 cgggtgatgg aattcaccct gtaattcttt aaccgtcaat tgacctttat gcagatttaa
      781 tattcctaaa acgtataact cttctaatga taattgacac atatttaaat aacactttag
      841 atttcgaaat aattcttgtg acgacaacaa atacgataca tagtcacaac taaaatcaaa
      901 tgtatattga ccaaaataac gttcaatata gtcactaagc tcattattca tatattctat
      961 tttatctata tgcattttat taatcgaaat agtcaattta cgttgatccc tttgatctct
     1021 tcctttcaat agccattgat gattgtttaa ataacttaac atttgaagaa gtgccatctt
     1081 agattggatt tctttcattt ttaataacct atctattgaa gcgctattgg aatcagaatt
     1141 atcatattta actaatagat ttaatagttt cacttgagtc aaagtgagat gaaatgaata
     1201 tttcaacata tcattaatga ctttcaacat tagtatgtgt gcagttaaac gcttaacttt
     1261 aaatttagac atctttaaaa cctctcttaa accatgccta tatctcaaga tgatatttca
     1321 aatgaacaat actattgctt gagaccatta atgaatgatc ataaatattt ctttctataa
     1381 aattagcttt ccaataactg tgttgttgca taatatcatt cacaagtaca ccattttcgg
     1441 aagtatgatt atctttatct atacttaaaa caatttgttt agttttagca tggctaaatt
     1501 gttgaagact cttacacgat aaacgtatag cgtctgaatt ctcatttaac aatgcggctg
     1561 gcaaacaaat gacacattgt acttcatgtt tgaacttcgt tacaatcatc gtgtcatttt
     1621 gataaataac aatccctcgt aattgattaa gtatatttat gataaaaatg aatattgata
     1681 atctagtcaa atttatttct ttgctcgctt cacttataat tgacatgtgc ataataagcc
     1741 ctcgaaattt tgtataattt gtcaaaagtt cagtaatctt attaatatca gacattgtga
     1801 ttttttcttt taagtcatca ttctcattaa tcaaatctac atcacatata attttagaac
     1861 gtgcaataga cacctgttct atttgtctta gcggtaagat aaaatagtct attagatgat
     1921 caatttcttt ataatagcgc acattcaact catttggttc cagatgatat attaattcaa
     1981 atactcctat ataattatct attaaacgtt tcagtttttg aattgcagta gtatttaagt
     2041 cgttaattaa aaatccaatc ttacatctat tactctcaaa agtcatatta aaaattgtag
     2101 ctactagctt ttctatcttg cctctttcag tactcgttaa caattcctta tattcatgtt
     2161 taatacgaaa tactacattt acattgtaat tcactatctt ttgaagtaat aaagtgattt
     2221 gttcaatcga tagctcatta cttgtgtcga ttgtaacaat tatatgcaag ttttcaggat
     2281 taacacttaa tctttgaatg atttgtttaa tagtataata atccatccaa taaaaattac
     2341 ttcctttaat atagatgttt ttaggttgat acatttgact ccttttggta ggctcaaaag
     2401 gtatatcaat ctcgcgcata cttgaagaac tttgattagt atcatcaaat aattcaatta
     2461 tatttttatc aatttcaact aattgggaat ggtaaattga atgagatgtt ggactatatc
     2521 tttttctaat taatttagga gtgtcaccat acgtttcttt aaagaggtgt ataaaacgag
     2581 aataatgatt aaaaccatga ctacttgcga tttcttcaat gggcttctta gaagttaaaa
     2641 tatcaattaa gcaatactcc agtctaatat gatttaaata ttgaataaaa ttactataag
     2701 gtgtcgcttt aaacatgtca cttaaagctt tgtttgtaat actaacttga ttaatgacat
     2761 ctttcctatt tatcttttta tggtggttgt ttgttaaata atcgtgcact tcttcggcta
     2821 ctaaatgacg actaccatcg tatgtattta atgacattaa ttcaacacac atgtaattaa
     2881 taatcttatc attagcatta taaggctgtt gtttaatttt gctgtaaatt aaatacttaa
     2941 tcaagattct aaaagtgcta gcaacctcat ttgttaatat cttgccacgc atcatatagt
     3001 ttgcattcat aaacttcaaa aatgtctttg cacttacttc aacaacacaa catacactat
     3061 catcatgacc atcaatctga tacaaatcat tcaacataat aacggtgaca tcatttcttt
     3121 ttacatcata ttgttgtaga ttgattgaaa ctacacctgt accttgtagc caatatataa
     3181 tttttaagtt tgcttccttc acactactca ttttcatact tttaaaaata tgtagtgaat
     3241 aattatctgt catcttacat cctcacatat acaaatatat tgatttactc ctgtttgtct
     3301 ttctcaaatc aattgtcaac atctaatatt cactaccaat tatatcgcca catgtttttt
     3361 agcagtaaca aaacataaat cgattatatc aaataatact tttattaaaa cattttttta
     3421 tgctaaatta ggatatttta tccattaaat atacattttt atccaaatac caaagctttc
     3481 ataatcaaag aaacttgatc gttcgtgtcg aatttttatg cattttctga ttaaaagtcc
     3541 tatattatgc acaaaatata catttagaat tttcagtaat attacaaatt tgtaacagac
     3601 ttattttcga aacattcagt tttcacaaag aatgccgtag ttataagttt tgcaaaatgc
     3661 aaatttctat acttttaaaa ttctattgtg tcaagatatt agcaaaaaat tacaaaacgt
     3721 taacaaagca cacaaggacg ctaatttctg ttatagtctt tcttgtcgtt taattacgag
     3781 agataactta taacattaat tttgtcacac ggacattacg aaaatatttt agatttaaaa
     3841 tttttaggag gatattttta aaatgaagaa aatcgctaca gctactatcg caactgcagg
     3901 attcgctaca atcgcaattg catcaggaaa tcaagctcat gcttctgagc aagataacta
     3961 cggttataat ccaaatgacc caacatcata tagctatact tacactattg atgcacaagg
     4021 taactaccat tacacatgga aaggtaactg gcatccaagt caattaaacc aagataatgg
     4081 ctactacagc tattactact acaatggtta caataactat aactataaca attacaacaa
     4141 cggttatagc tacaataact acagccgtta caacaactac tcaaataata atcaatcata
     4201 taactacaat aactataata gttacaacaa ctactcaaat aataatcaat catataacta
     4261 caataactat aatagttaca acacaaacag ctaccgtact ggtggtttag gtgcaagcta
     4321 cagcacttca agcaacaatg ttcaagtaac tacaactatg gctccatcat caaatggccg
     4381 ttcaatctca agtggttata cttcaggacg taacttatac acttctggtc aatgtacata
     4441 ctacgtattt gatcgtgtag gtggtaaaat cggttcaact tggggcaatg caagtaactg
     4501 ggctaacgca gctgcaagag ctggttacac agtgaacaat acaccaaaag ctggtgcaat
     4561 tatgcaaaca actcaaggtg catacggtca cgttgcatac gttgaaagtg ttaacagcaa
     4621 tggttcagta agagtttcag aaatgaacta tggttatggc ccaggtgttg taacttcacg
     4681 tacaatctca gctagccaag ctgctggtta taacttcatt cactaattag tgatgactaa
     4741 gttttacgcc aacaaggttt caagagcctt gttggctttt ttaatttcta tgaaaaaaat
     4801 cgaattggta aaaatctcaa aatttcgatt ttcaccaatc cgattcactc tgtaataaag
     4861 aataaacaac atacagccat tgacacaccc aaatttaggc acgtcaaatc ggctatacat
     4921 tgataaattt ttagttaaag tacttacaaa tatacttgcc ttcaaattct caattaattt
     4981 agtcattaca aatcatgaca taaaacttac attacatata tcaacatgtt ccgctacaaa
     5041 acatattcag tatatgtata gaggatattt attctaagtt aaaacctttt caaattataa
     5101 ccgctacaat tataaatgat taaagtgttt caacatatta tatatattcc acgctcacat
     5161 taagttaaac gtgaattcga tgacttttta atacctatcc ctgtaaaacc atagataatt
     5221 gctataattg cgcataaata acatggtact gtccatatga aaaattctcc aacagagaca
     5281 tgaagttgat tcgtatagta aatacctgat gttccccatg gtattaaagg taagaccatc
     5341 gtacttgagt cttcaagtgt tcttgataaa acggaacgag agacttggta tttttcgaac
     5401 aaatctttca ttaacacacc gaccataata attacaatcg aagcaacacc tgcagcgaat
     5461 acaagcgcaa tacaacaaat aacagtaaca catattaaac ttcctacaga atggatgcct
     5521 ttagaaatag tagttaataa gacttctaaa catcctgctt tttctacaat acctgcaaat
     5581 gcatatccgc aaaatatcgt tactaatatt tgagtcatac tcatcatacc accctgctct
     5641 aacaagcttt tcacactgga tgaaatatga gactgatgta tcattgagtc gttaaagcca
     5701 ctaaatgttg ctttgaaacc atctgtcatt ttgaaatgat gattaaaagt acccactata
     5761 atggcagaaa agcttgatat tagcatagct ggcactgtag ccattttaaa tagcaaacaa
     5821 acaatgatca caattaaggg aacccagacc catatgttaa tttgataaat ctgtgcaagc
     5881 tctgataaca aagtttgaat ctgtttatca tttgaatgcc ctttaaattg aaatccagca
     5941 ataaaccata ctaataaacc tatgattgac gcaggtatcg tcgtccacat catcgaatgt
     6001 atatgtttaa atatattaac tttagtaaca agtgccgcta aattagttgt atctgataat
     6061 ggtgacattt tatctccaaa tacagcgcct gctataatag cacccgcagc cattcctgga
     6121 ggaatcccca attgattacc aatagaaata agtgcaatcc ctgcagttga tgcagagccc
     6181 catgctgtac cagttgctac agatgtaaca gcacttataa aaaaggctga tattaaaaaa
     6241 tagcttggat ttaataaatc taagccataa taaatcaacg ctggcactgt gccagaaaac
     6301 atccaactgc ctactataat tcctaccgct agtataatta aaattgcagg cattgcagta
     6361 tttaaacgtt ctgcaatgcc tttttctaaa tcttgccatg ttaagccgac acgttttgca
     6421 atccatgtgg catatgctga ggcaataatt aataatactt gaattggaat atcaaaaaac
     6481 acaaagcctg ttacaacaac aataaccatt acaatcattg tcgaaattga ttctaaaaag
     6541 gttggttttc ttgtcatcat ctatcgtccc cttcgcttat tgatgagaaa cctcttttct
     6601 tcaatttatt gcttttacat aatgctatat ccttttctat cttcaagcca tcatttattt
     6661 taaatatttt tctaaatcaa gcttatctaa gccaatggat tcaactgtta agccttcctc
     6721 aaagaagtct ctttctaaga ttgtcgatgc aatgacaatt actgcatcta tatttggtgt
     6781 cggtacatca ataacacgac ctaagcttga ccataatact aaaccatatg caatatcttc
     6841 agttaaatat ctgctttcta catgatttgg tcctggaatt tgtgaaaata ctgggcttgt
     6901 attaaacaaa cgatttaatg gttcatcttc tttatcacgt tctaaataac cacgttcaat
     6961 acgtgattct ttagctgttg ataattcaaa acctaatcta cggcctaaat ttaaacgttc
     7021 taattcgatt gcatgaagta atctaactgt atgtttagta attccttctt tatataaagc
     7081 gaactcacca gcataatcaa tgcgaccgac attcaataat gttggccctg gatgcacttc
     7141 aggattacca ttttcaagat ttgttttaat taagctttcc tcttttacta aatgatcata
     7201 aatacttgaa actttgtcat aacaatcatt tagacagctt ctatcatatg ttgaaaagaa
     7261 gatacgacgt acatttagag ataaatcaac tgctgcattt tcaaaatcga cacgcgtacc
     7321 atacgtcaac gtattagctt ccgctaattg tggttttgtt tcaatatgtc tatcttctaa
     7381 aacattcata aaacgaattg accccattgc tgcagccatg ttgaagaata tcaactgatt
     7441 atcagttaca tgctctgcca ttacatcagc ataatactct atgtatgaag atggaataat
     7501 cacttgaaca atttcagcat cttttaaaac atattccata tcatcactaa tatcagtgaa
     7561 ttttacgaaa cgttcatcac cttcattatt aaaatcaaat ccgccctttt cgattgcgtt
     7621 ttgaaactta cttatagatt gattacgaca atataattta acatcgtggc ctttgctcac
     7681 catatctact gctgccgtaa ctgcgccatt tcctgatcct acaattgcta ttttcataaa
     7741 caaccctctt tctatctttg gttaaaatta aaaacaaatt atacgtaaga caatataaaa
     7801 atgatgcgaa ttcattacgc atcattataa atgttaagta tatataacct taaattaacc
     7861 tatttaaacg ccgacgtcca ccaattattt ttatttttaa taattgttta ataaacatgt
     7921 ttatttttga ttatattttg ttatagttaa agataatatt acaattttca aaggagtgtc
     7981 taatatgaca actgaaatga acgacgtaac aaatcatcaa ccgaatcgca aatccaatga
     8041 tgagaacatt atggcgatgc ttatctattt attaagttta ttcacatcta ttattggtcc
     8101 actgattata tggttattga aaaaagatga atcaaaacta gttgatcgtg ctggaaaaaa
     8161 ttatcttaac tatacgattt cttatattat ttggtctatc attttagtcg ttatcacttt
     8221 tattggcgtt ttcctaattg ctaccgatat tgatttcatt atcattatag gtttcatcat
     8281 tacgtttatc ggtattttat ccatattcgc tttctcaata ttatcttttg tattcacaat
     8341 tattgcgtgt gtcaaatatt ata
//
LOCUS       DAKPJH010000109         8337 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.109, whole genome shotgun sequence.
ACCESSION   DAKPJH010000109 DAKPJH010000000
VERSION     DAKPJH010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8337
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.109"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(44..1579)
                     /locus_tag="OY092_002200"
     CDS             complement(44..1579)
                     /locus_tag="OY092_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HCX1077124.1"
                     /translation="MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR
                     QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPY
                     LKDTLRRLNYPVLCANIYENDSTLTDNGVQYFQVGDQTVGVIGLTTQFIPHWEQPEHI
                     QSLTFHSAFETLQQHLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLE
                     AFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGKVVLSTDEYENLSVESCELL
                     PVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYA
                     LLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSA
                     EYFDVKNDKVSVSADFLEPKPQHFNYDIYGGVSYTINVGRPKGQRVSNMMIQGHAVDL
                     KQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFK
                     VEK"
     gene            complement(1630..3195)
                     /locus_tag="OY092_002201"
     CDS             complement(1630..3195)
                     /locus_tag="OY092_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCX1077125.1"
                     /translation="MLKGASKNEKIYKSLTVSAIVATISLSVLPQSLAITHESQHTKQ
                     QRTVLFDRSHGQTAGAADWVSDGAFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKI
                     FVIPEANIPFKESEQAAIVNYVKHGGNVVFISDHYNADRNLNRIDSSEAMNGYRRGAY
                     EDMSKGMNAEEKSSTAMQGVKSSDWLSTNFGVRFRYNALGDLNTSNIVSSKESFGITE
                     GVKSVSMHAGSTLAITNPEKAKGIVYTPEQLPAKSKWSHAVDQGIYNGGGKAEGPYVA
                     ISKVGKGKAAFIGDSSLVEDSSPKYVREDNGEKKKTYDGFKEQDNGKLLNNITVWMSK
                     DNDGKSLKASGLTLDTKTKLLDFERPERSTEPEKEPWSQPPSGYKWYDPTTFKVGSYG
                     SEKGADPQPNTPDDHTPPNQNEKVSFDIPQNVSVNEPFEVTIHLKGFEANQTLENLRV
                     GIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENGNATIKVNAKVLESMEGSKIRL
                     KLGDKTLITTDFK"
     gene            3402..4358
                     /locus_tag="OY092_002202"
     CDS             3402..4358
                     /locus_tag="OY092_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HCX1077126.1"
                     /translation="MKNFKCLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGY
                     KPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVD
                     VGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSL
                     KDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDV
                     DAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFID
                     IAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK"
     gene            4572..5345
                     /gene="phnC"
                     /locus_tag="OY092_002203"
     CDS             4572..5345
                     /gene="phnC"
                     /locus_tag="OY092_002203"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HCX1077127.1"
                     /translation="MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKS
                     TLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNV
                     LSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIAR
                     ALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRI
                     IGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN"
     gene            5347..6147
                     /gene="phnE"
                     /locus_tag="OY092_002204"
     CDS             5347..6147
                     /gene="phnE"
                     /locus_tag="OY092_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HCX1077128.1"
                     /translation="MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFG
                     DLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCAS
                     NIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGIGQIPGILALFILTICIIGKLL
                     YESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGL
                     VGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA"
     gene            6144..6959
                     /gene="phnE"
                     /locus_tag="OY092_002205"
     CDS             6144..6959
                     /gene="phnE"
                     /locus_tag="OY092_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HCX1077129.1"
                     /translation="MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFAGVPSLE
                     LKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLA
                     FLGANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGM
                     LGKLLAEDIEGLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSA
                     SILGLIGAGGIGTPLIFAIQTRSWDRVGIILIGLVLMVAIVDLISGSIRKRIV"
     gene            complement(7090..8268)
                     /gene="deoB"
                     /locus_tag="OY092_002206"
     CDS             complement(7090..8268)
                     /gene="deoB"
                     /locus_tag="OY092_002206"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HCX1077130.1"
                     /translation="MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQ
                     TLPNLEKLGLGNIDKLPVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFK
                     VYPNGFPEELIQQIEEMTGRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQ
                     IAAHEDIIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALK
                     PFGKTVLDHLKDGGYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTG
                     ISFLNLVDFDALYGHRRDKPGYAQAIKDFDDRLPELFSNLKEDDLVIITADHGNDPTA
                     PGTDHTREYIPVIMYSPKFKGGHALESDTTFSSIGATIADNFNVTLPEFGKSYLKELK
                     "
BASE COUNT         2633 a         1535 c         1382 g         2787 t
ORIGIN      
        1 aaaacttacc cgattaaaat caagtaagtt ttacatatat ccgtcacttt tcaactttaa
       61 aatcaacaac ttgcgggatg cgcatcaaat tattatttga taaaaaatca ataagtaatt
      121 gtgcgccttc aacttgaata tcttttacaa ctggcgcgtc gatatacata tcatactgac
      181 caccgccaac tgcacgataa ttatttacac aaattgtata tgtctgcttt aaatcaactg
      241 cgtgaccttg aatcatcata ttactcacac gttgtccctt tggtctgcca acattaatgg
      301 tataacttac gccaccatat atatcataat taaagtgttg tggtttgggt tcaaggaagt
      361 ctgcgctcac acttacttta tcatttttca cgtcaaaata ttctgctgat cgttcaatgg
      421 cttctttaag tttggcacca cttacagcta aaactttaaa tgtatttgga aatgggtaat
      481 tgttaatcac atctcgcatc gtcacgactt gcttgaaacc actagcagaa tcaaacaaag
      541 ctgtacaggc aacatctgcg tcactttttt ctaataaagc ataattcata aaatttgtaa
      601 aaggatgcgg tgccacacgt gcctcaaatg catgattaat cgtcatatca tatggcaatg
      661 tagtaatttc gtaatctaac cagtcctcta actgctttcg taaatgttgg tcatcttcat
      721 caatagtaaa tgtggaatca tctataacag gaagtaattc acatgattca acggatagat
      781 tttcatattc atcagtactc aagactactt tgcctacagt tgttcctctc gtaccaggtt
      841 gaatcacagc cgtttgctta aacctttcag caatttgtcg atgttggtga cccgtaataa
      901 agatatctat atctttagaa aacgcttcta acatggcata tccttcattt tcacccgtta
      961 acacttcggt cggcgtacca ctttctaaat ccttttcaaa tccaccatgg taacaaacca
     1021 caatgatatc tgcatgtcgc ttcatttcag gcaagtgttg ttgaagtgtt tcaaaagcac
     1081 tatgaaacgt aagtgactga atatgctctg gttgttccca atggggaata aattgtgtcg
     1141 ttaaacctat cacaccaacc gtttgatctc caacctgaaa atactgcaca ccgttatcag
     1201 tcaatgtact atcattttca taaatattag cgcacaaaac tggataattg agtctgcgta
     1261 aagtgtcttt taagtatggt aatccataat taaattcatg attaccaagc gtaccaaagt
     1321 cgaatgccat tcgattataa aaatcaacta aaggctggct actgccgcta tgcgcgatta
     1381 agtaattaca aaatggtgac ccttgcaaaa aatcaccatt atctatttta aaactttggt
     1441 catactgcct tctgtcttgt tctataacat gattcgctag taacaatccc ataggttgat
     1501 attgatttct actcgtaaaa tctgttggga aaatataacc gtgtacgtca ctcacgacat
     1561 aaaatgctat gtttgacatc ctcactcact ccttcaatca caaacatctt tcttatttct
     1621 attatatatt tatttgaagt ctgttgtaat caaggttttg tcaccgagtt ttaaacgaat
     1681 ctttgaacct tccatacttt cgagtacttt ggcattgacc ttaattgtgg catttccgtt
     1741 ttcatctgct ttaactgttg gcaaagtact gtaacctggc gggttataat cgttatcttt
     1801 acttgaaaat tgtccgattt gacgtccgcc ttctttgtaa ataccaactc taagattttc
     1861 aagtgtttga tttgcttcaa atccttttaa atgtattgtc acttcaaatg gctcatttac
     1921 agaaacattt tgcgggatat caaatgatac tttttcgttc tgatttggtg gcgtatgatc
     1981 atctggtgtg tttggctgag gatctgcgcc tttttcgctg ccataactac ctactttaaa
     2041 tgttgttgga tcataccatt tataaccact cggcggttgt gaccatggct ctttttcagg
     2101 ctcagttgaa cgctctggtc gttcaaaatc aagcaactta gtctttgtat ctaatgttag
     2161 gccactcgcc ttaagtgatt tcccatcatt atctttagac atccaaaccg ttatattatt
     2221 taacagctta ccgttgtctt gttctttaaa accatcatat gttttcttct tttctccatt
     2281 atcttctctt acatatttgg gcgaactatc ttccacaagt gatgaatcac cgataaatgc
     2341 tgctttacct tttccaactt tagaaattgc tacataggga ccttctgctt taccgccccc
     2401 attataaata ccttgatcta cagcatgtga ccatttactt ttcgctggca attgttctgg
     2461 tgtatacaca ataccttttg ctttctctgg attagtaatt gctaatgtcg atccggcatg
     2521 catagataca gatttcacac cttcagtaat accgaaactt tcttttgaag aaacaatatt
     2581 gctcgtattt aaatcaccta gtgcattata tcgaaaacgt acgccaaagt ttgtagataa
     2641 ccaatctgaa cttttcacac cttgcattgc agtagaactt ttttcttctg cattcatacc
     2701 tttcgacata tcttcatacg ctccacgtcg ataaccattc attgcctctg atgaatcaat
     2761 acgatttaaa tttcggtcag cattgtaatg atctgaaata aagacaacat tgccaccatg
     2821 tttcacatag ttaacaattg ctgcctgttc tgattctttg aaaggaatgt tagcctcagg
     2881 aattacaaat attttggaac ttttcaaact tgcttctgtt atgttcgaat gaccatcaat
     2941 agctttaacg tcataacctt gtttttgtat tgaatccgca taatctgaaa atgcaccatc
     3001 actaacccaa tctgcagcac cagctgtttg accatgagaa cgatcgaata ataccgttcg
     3061 ctgttgcttt gtatgttgcg attcatgcgt tatagctaaa gattgcggta gcacacttaa
     3121 tgatatcgtt gcaacaattg cagagacagt taatgactta tatatttttt cattttttga
     3181 ggctcctttt aaaataaatt tgttcttgaa ttataagata aaaattcgtt gcatatgagc
     3241 aatttaacga aaagtttaca aaatcttatc acactcttaa agaaagttat taaaattcat
     3301 ttttataaaa tactttttcg catttaaatg tggtacgcta taagtgtaat ttcattgcat
     3361 acatattaca cgattaagaa tgtgaagggg acagttatca aatgaaaaat tttaagtgtt
     3421 tatttgtatt aatgttagca gtcattgttt ttgcagcagc atgtggaaac tcaagttctt
     3481 tagataatca aaagaacgct agtaatgatt cggattctaa atcaggagga tacaaaccta
     3541 aagaattaac agtacaattt gtaccttcgc aaaatgctgg aacattagag gctaaagcaa
     3601 aaccattaga aaaattacta tctaaagaat taggaattcc agttaaagtg tctgtatcaa
     3661 ctaactacaa tacaattgtt gaagctatga agtctaaaaa agttgatgtt ggtttcttac
     3721 caccaacggc atacacatta gcacatgatc aaaaagcagc tgatttatta ttacaagcac
     3781 aacgttttgg tgtaaaagaa gatggttcag caagtaaaga acttgtagat agttataaat
     3841 cagaaattct tgttaaaaaa gactcaaaaa ttaaaagctt gaaagattta aaaggtaaga
     3901 aaattgcctt acaagatgta acatcaactg ctggatatac attcccactt gcgatgttaa
     3961 aaaacgaagc aggtattaat gcaactaaag atatgaaaat tgtgaatgtt aaaggtcatg
     4021 accaagcagt tatctcatta ttaaatggag atgtagatgc tgcggctgta tttaatgatg
     4081 cacgtaatac tgtgaaaaaa gaccaaccaa atgtatttaa agacacacga attttaaaat
     4141 taacacaagc tattccgaat gacacaattt ctgtaagacc agatatggat aaagattttc
     4201 aagaaaaatt gaaaaaagct tttatagaca ttgctaaatc aaaagaaggt cacaaaatta
     4261 ttagcgaagt ttattcacat gaaggataca cagaaacgaa agattcaaat ttcgacattg
     4321 taagagagta cgaaaaatta gttaaagata tgaaataatc attatttaac aaatgaatca
     4381 ttagcgaatt tggtattaaa agctttcgtt caatagatat attctagatt aatattgaaa
     4441 agctaggcgc taaactgaaa cagatataga aaggtgtcgc tgtacatttg aaaccatttg
     4501 tacacagaaa cccaatgtct atgatatttc agtttacctt ggcttttctt tattaaagaa
     4561 aggtgtcaaa catgagtcaa atcgaattta aaaacgtcag taaagtctat cctaacggtc
     4621 atgtaggctt gaaaaatatt aacttaaata ttgaaaaagg tgaatttgca gttattgtcg
     4681 gactatctgg tgctgggaaa tccacgttat taagatctgt aaatcgtttg catgatatca
     4741 cgtcaggtga aattttcatc caaggcaaat ccatcactaa agcccatggt aaagcattat
     4801 tagaaatgcg ccgaaatata ggtatgattt tccaacattt taatttagtt aaacggtcaa
     4861 gtgtattacg aaatgtacta agtggacgtg taggttatca ccctacttgg aaaatggtat
     4921 taggtttatt cccaaaagaa gacaaaatta aagcaatgga tgcactagaa cgcgtcaata
     4981 tcttagataa atataatcaa cgctctgatg aattatcagg tggccaacaa caacgtatat
     5041 ctattgcacg tgcgctatgc caagaatccg aaattattct tgcagatgaa ccagttgctt
     5101 cattagaccc attaacaacg aaacaggtta tggatgattt aagaaaaatc aaccaagaat
     5161 taggcatcac aattttaatt aatttacatt ttgttgactt ggcaaaagaa tatggcacac
     5221 gcatcattgg tttacgtgat ggtgaagttg tctatgatgg tcctgcatct gaagcaacag
     5281 atgacgtatt tagtgaaata tatggacgta caattaaaga agatgaaaag ctaggagtga
     5341 actaacatgc ctttagaaat acctacaaag tatgactccc ttttaaagaa aaaggtttct
     5401 ttaaaaacga gttttacctt catgttaatc attgtgctta tcatttggag cttcatttat
     5461 acggggttta attttggaga tttaatgata ggaatacctc aaataggtga tctattcaaa
     5521 caaatgattc cacctgattt cgagtattta caacaaatta caacgccaat gttagatacc
     5581 attcgaatgg ctatcgtaag tacagtatta ggtagcatcg tttcaatacc aattgcgtta
     5641 ttatgtgcta gcaatatcgt tcatcaaaag tggatttcaa taccctcgcg ctttatttta
     5701 aatatagttc gtactattcc agatttgtta ttagcagcaa tctttgtggc tgtatttgga
     5761 atcggtcaaa ttccagggat attagcattg tttattttaa ctatctgtat tattggaaaa
     5821 ttattatatg aatcattgga aacgatagat ccaggtccaa tggaagcaat gacggctgtt
     5881 ggcgctaata aaataaaatg gattgttttc ggtgttgtac cacaagccat atcgtcattt
     5941 atgtcatacg tattatatgc atttgaagta aatatacgtg cttcagctgt gcttggatta
     6001 gtcggcgctg gcggtattgg attgttttat gatcaaacac ttggtttatt tcaatatcca
     6061 aaaacagcaa cgattatttt atttacttta gttatcgtcg tcgtcattga ttacatcagt
     6121 acgaaagtga gggcacatct cgcatgacac aggaaatagc aaaatataat gttcacacaa
     6181 aagcacacaa acgaaaattg attaaaagat ggcttattgc aattgtcgtc ttagctatta
     6241 tcatctgggc atttgcaggt gtaccaagtt tagaacttaa aagtaaatca ttagaaatct
     6301 taaaatccat attcagcgga ttattccatc cagatattag ctatatctat ataccagatg
     6361 gcgaagactt attacgtggt ttacttgaaa cctttgcgat agccgttgta ggtactttca
     6421 tcgccgcaat tatctgtatt ccattagcat ttttaggtgc aaataatatg gtaaagttac
     6481 gcccggtttc aggtgttagc aaatttattt taagtgttat acgtgtcttc ccagaaattg
     6541 taatggcact tatatttatc aaagctgttg gcccaggttc attttcaggt gtattagctt
     6601 taggtatcca ttctgtaggt atgcttggga aacttttagc tgaagatatt gaaggtctag
     6661 atttcagtgc tgtagaatca ttaaaggcca gtggtgcgaa taagattaaa acactcgtat
     6721 ttgcagtcat accacaaatt atgcctgcct ttctatcact catactttat cgctttgaac
     6781 taaacttacg ttcagcttct atactggggc taattggggc tggtggtatc gggacaccac
     6841 tcatatttgc cattcaaaca cgttcttggg accgtgtagg tattatatta atcggtttag
     6901 tactaatggt cgcaattgtc gatttaattt ccggttcaat ccgaaaacgt attgtttaac
     6961 attaaatcag gatactccta aataagaggt cctaccgtct tacgtttctc tattataata
     7021 aaaacagcag tgaagaaaac tattgttata gttaacttca ctgctgtttt tataatatct
     7081 aaatttattc tatttcaatt cctttaaata acttttaccg aactctggta atgttacgtt
     7141 gaaattatct gctatagttg caccgataga actgaatgta gtatcacttt ctagtgcatg
     7201 accaccttta aatttcggac tgtacataat tactgggata tattctctcg tatggtccgt
     7261 acctggcgct gtcgggtcat taccatggtc tgctgtaata attactaaat cgtcttcttt
     7321 taagttgcta aacagttctg gcaagcgatc atcgaaatct ttaattgctt gtgcataacc
     7381 tggtttatca cgacgatgac cgtataatgc atcaaagtct actaagttta agaagctaat
     7441 acctgtgaaa tctttcttaa caattttcat caattgatcc ataccgtcca tgttactctt
     7501 cgtacgaacc gcttctgtta caccttcacc atcataaatg tcattaattt taccgatggc
     7561 aataacatca taaccaccgt ctttcaaatg atctaagaca gttttaccaa aaggttttaa
     7621 cgcatagtca tgtcgattag atgtacgtgt aaagtttcct ggttcaccaa catatggacg
     7681 tgcgataata cgaccaatta aatatttagg gtcttttgtc aactcacgaa ccttttcaca
     7741 aatatcatat aactcttcta atgggataat gtcttcatgt gcagcaattt gcaatactgg
     7801 gtctgcactt gtataaacaa ttaagtcacc agttttcatt tggtgctcgc cccactcatc
     7861 gataatttgc gtacccgatg ccggtttgtt agcaacaact ttacgacctg tcatttcttc
     7921 aatttgttga attaactctt cagggaatcc attagggtat actttaaaag gctgcataat
     7981 atttaatccc ataatttccc agtgaccagt cattgtatct ttaccaactg aagcttcact
     8041 caatttagta tagtatgctt ctggttgttc aactgcattt actactggta atttatcgat
     8101 gttccctaga cctaactttt caaggtttgg taaagtttga tcgaagcctt ctaaggtatg
     8161 tcttaaagta tgtgaacctt catctttaaa atcagctgcg tctggcgctt caccaatacc
     8221 tactgaatcc attacgatta aatgtacacg attaaatggt cttgtcatag ctatcactcc
     8281 caaattttat atatattagt aatctgaatc tgcttctaaa ccttgcataa tttgaac
//
LOCUS       DAKPJH010000110         8151 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.110, whole genome shotgun sequence.
ACCESSION   DAKPJH010000110 DAKPJH010000000
VERSION     DAKPJH010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8151
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.110"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            13..420
                     /locus_tag="OY092_002207"
     CDS             13..420
                     /locus_tag="OY092_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077131.1"
                     /translation="MSSIIGRITIWIGIVAQIYFSVVFVRMISINIAGGSDYETIFLL
                     GLILTLFTVLPTIFTAIYMESYSVIGGALFIVYAIIALCLYNFLSAILWLIGGILLIW
                     NKYSKDESTDENEKVDIESTENQFESKDKITKE"
     gene            470..1095
                     /locus_tag="OY092_002208"
                     /pseudo
     CDS             470..1095
                     /locus_tag="OY092_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498686.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1306..2082
                     /locus_tag="OY092_002209"
     CDS             1306..2082
                     /locus_tag="OY092_002209"
                     /EC_number="1.1.1.304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-acetoin forming diacetyl reductase"
                     /protein_id="HCX1077132.1"
                     /translation="MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAA
                     ALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITE
                     EQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFA
                     VRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQI
                     ALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR"
     gene            2226..2348
                     /locus_tag="OY092_002210"
     CDS             2226..2348
                     /locus_tag="OY092_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077133.1"
                     /translation="MHQLKALLVLTHPRYYKTTQKRHYLIYLNKNSQSYLILFL"
     gene            2418..3404
                     /locus_tag="OY092_002211"
     CDS             2418..3404
                     /locus_tag="OY092_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HCX1077134.1"
                     /translation="MEDLERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENI
                     KNLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVAT
                     LRLLEIIKKYNSHIKRFVFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTL
                     NYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDF
                     VYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARK
                     GDIKHSYADISNLKALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMSKK"
     gene            3361..4053
                     /locus_tag="OY092_002212"
     CDS             3361..4053
                     /locus_tag="OY092_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HCX1077135.1"
                     /translation="MKKLQLKKWKCQKNNIEAVHNNKGYAYQRKLDKLEEVRKRYYPI
                     KRAIDLILSIVLLFLTLPIMVIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMC
                     KNAEKNGAQWADKDDDRITNVGKYIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE
                     LFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIR
                     TLMVVITGEGSR"
     gene            4263..5429
                     /locus_tag="OY092_002213"
     CDS             4263..5429
                     /locus_tag="OY092_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCX1077136.1"
                     /translation="MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIE
                     QLDARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKF
                     ISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSRITDSIICVSDFDKQLALKS
                     RFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMI
                     ARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLG
                     NVINASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVTDNGICMM
                     NNQPETIAKVLEKYLIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ"
     gene            5410..6648
                     /locus_tag="OY092_002214"
     CDS             5410..6648
                     /locus_tag="OY092_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HCX1077137.1"
                     /translation="MENQHNSKYLTLLLIGLAVFIQQSSVVAGVNVSIADFITLLILV
                     YLLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVV
                     IYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKG
                     LMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIY
                     FFIKKLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDALPSLDRMASIFEEG
                     FASLNDSGSERSVVWINAISVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFA
                     EWGILFGALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFI
                     LGIIVFIVQYEKMERDRNEE"
     gene            6638..8068
                     /locus_tag="OY092_002215"
     CDS             6638..8068
                     /locus_tag="OY092_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HCX1077138.1"
                     /translation="MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVS
                     FSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLLLALTVFAMYI
                     AVITIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVASGIVLSVVVI
                     FVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPN
                     GQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMSLHQ
                     SHSLTKTLADNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLI
                     IPLNMLISRQYLLIVNKIRLYNASITIGAVMNLVLCLVLIYFYGIYGAAIARLITEFF
                     LLIWRFIDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIV
                     VYLLLMMTMKNQYVWQILRHLRHKTI"
BASE COUNT         2721 a         1136 c         1502 g         2792 t
ORIGIN      
        1 tggggaatga gcatgagctc aattatagga agaataacaa tttggatagg catcgtagct
       61 caaatatatt ttagtgtcgt ttttgttagg atgatatcta ttaatattgc tggaggctct
      121 gattacgaaa caattttttt attaggatta atattgactc ttttcactgt tttaccaacc
      181 atctttactg cgatttatat ggaaagttac tctgtaatcg gaggtgcact ttttattgtt
      241 tatgcgatta ttgcactgtg tttatataat ttcctttcgg caattttatg gctgattggt
      301 ggtattttgc tgatttggaa taaatactca aaagatgaat cgacagacga aaatgaaaaa
      361 gttgatattg aaagtacaga gaatcaattt gaatctaaag ataaaatcac taaagaataa
      421 agagaatatt taaggcggag tataaatatt aaataaatgg ggaatagaca tggaaaaaaa
      481 tgtagaaaaa tcattcataa agataggttt atattttcaa atagtttata tagtactcat
      541 ggctataact ttatgtgggt ttgtaatttg ctatggacta attttcggcc ttttctattt
      601 attatcaggt agcagagctg attatttaat agtaacaata gttatatcgg caataatttc
      661 tatatttgta attatacttt caatcgtacc tgtcatcgta ttggcatctg acttatttaa
      721 agaaaggatt tcaaaaggtg tcatattaat tgtattggct attatcgctt tagtattatg
      781 caacttgtat ctgcaatact ctggtttgtt tcagccatat ctattttagg tagaaaaaaa
      841 ttagtagctg cagcagatac taccactatt caaaaaagta aagggaacgc aaatcaagca
      901 tcacataaag acacgggtaa aaaggaactt gatagtcaag acatgatgga acatcctgag
      961 tttaaaaatc ccacgactaa aaacctagaa ggattaaacg aagaaataca taaagatgaa
     1021 gctacaacta aagttgacag tgataacacg caaccgccga ttgaatcaaa agaccatgtc
     1081 tcgaaaaaag attgatgaca aactaatcga gagacttaaa aaataatatt caacataagc
     1141 acttttaaag cgacatttaa acgcattgcc aatcactaat ggtagtgcgt ttaactatac
     1201 cttaaatatc tgaatatttt gttaaatgga gttatctttg ttgtactatt caaatgaaga
     1261 ggagtaaaat gtaattaaag gaaagtaatt tgaggagtga tctttatgac aaacaacaaa
     1321 gtagcgttag taactggcgg tgcacaaggg attggtttta aaattgcaga acgtttagtg
     1381 gaagatggtt tcaaagtagc agttgttgat tttaatgaag aaggggcaaa agcagctgca
     1441 cttaaattat caagtgatgg tacaaaagct attgctatca aagcagatgt atcaaaccgt
     1501 gatgatgtat ttaacgcagt aagacaaact gcagcgcaat ttggtgattt ccatgtcatg
     1561 gttaacaatg ccggccttgg accaacaaca ccaatcgata caattactga agaacagttt
     1621 aaaacagtat atggcgtgaa cgttgcaggt gtgctatggg gtattcaagc cgcacatgaa
     1681 caatttaaaa aattcaatca tggtggtaaa attatcaatg caacatctca agcaggcgtt
     1741 gagggtaacc caggattgtc tttatattgc agtacaaaat tcgcagtgcg aggtttaaca
     1801 caagtagccg cacaagattt agcgtctgaa ggtattactg tgaatgcatt cgcacctggt
     1861 atcgttcaaa caccaatgat ggaaagtatc gcagtggcaa cagccgaaga agcaggtaaa
     1921 cctgaagcat ggggctggga acaatttaca agtcagattg ctttgggcag agtttctcaa
     1981 ccagaagatg tttcaaatgt agtgagcttc ttagccggta aagactctga ttacattact
     2041 ggacaaacaa ttattgtaga tggtggtatg agattccgtt aataatcatc cactaatgat
     2101 aaataaatcc ttattgttaa gtttaatcac ttagcagtaa ggatttttta gtgcacttag
     2161 aagggattgt attggtagaa aattaataag cgaagttctt aagtgagtta tgatgtcaca
     2221 gtctaatgca tcagttgaaa gcattactag tattaacaca cccaagatat tataaaacaa
     2281 cacaaaaacg ccactatcta atttatctca ataaaaattc acaaagttat ctcattttat
     2341 ttttataaat aaaaaatatc gataaaaagc ttacaatact ttatgttttt atgatatatt
     2401 tttaatgtat aaatgaggtg gaagatttgg aaagagtttt gataactggt ggggctggtt
     2461 ttattgggtc gcatttagta gatgatttac aacaagatta tgatgtttat gttctagata
     2521 actatagaac aggtaaacga gaaaatatta aaaatttggc tgacgatcat gtgtttgaat
     2581 tagatattcg tgaatatgat gcagttgaac aaatcatgaa gacatatcaa tttgattatg
     2641 ttattcattt agcagcatta gttagtgttg ctgagtcggt tgagaaacct atcttatctc
     2701 aagaaataaa cgttgtagca acattaagat tgttagaaat cattaaaaaa tataatagtc
     2761 atataaaacg ttttgtcttt gcttcgtcag cagctgttta tggtgatctt cctgatttac
     2821 ctaaaagtga tcaatcatta atcctaccat tatcaccata tgcaatagat aaatattacg
     2881 gcgaacggac gacattaaat tattgctcgt tatataacat accaacagcg gttgttaaat
     2941 tttttaatgt atttgggcca agacaggatc ctaagtcaca atattcaggt gtgatttcaa
     3001 agatgttcga ttcatttgag cataacaagc catttacatt ttttggtgac ggactgcaaa
     3061 ctagagattt tgtatatgta tatgatgttg ttcaatctgt acgcttaatt atggaacaca
     3121 aagatgcaat tggacacggt tataacattg gtacaggcac ttttactaat ttattagagg
     3181 tttatcgtat tattggtgaa ttatatggaa aatcagtcga gcatgaattt aaagaagcac
     3241 gaaaaggaga tattaagcat tcttatgcag atatttctaa cttaaaggca ttaggatttg
     3301 ttcctaaata tacagtagaa acaggtttaa aggattactt taattttgag gtagataata
     3361 ttgaagaagt tacagctaaa gaagtggaaa tgtcaaaaaa ataacattga agctgtccat
     3421 aataataagg gttatgccta tcaaagaaaa ttagacaaac tagaagaagt gagaaaaaga
     3481 tattacccaa ttaaacgtgc gattgactta attttaagca ttgttttatt atttttaact
     3541 ttaccgatta tggttatatt cgccattgct atcgtcatag actcaccagg aaaccctatt
     3601 tatagtcagg ttagagttgg gaagatgggt aaattaatta aaatatacaa attacgttcg
     3661 atgtgtaaaa acgcagagaa aaatggtgcg caatgggctg ataaagatga tgatcgtata
     3721 acaaatgtcg ggaagtatat tcgtaaaaca cgcattgatg aattaccaca actaattaat
     3781 gttgttaaag gggaaatgag ttttattgga ccacgcccgg aacgtccgga atttgtagaa
     3841 ttatttagtt cagaagtgat aggtttcgag caaagatgtc ttgttacacc agggttaaca
     3901 ggacttgcgc aaattcaagg tggatatgac ttaacaccgc aacaaaaact gaaatatgac
     3961 atgaaatata tacataaagg tagtttaatg atggaactat atatatcaat tagaacattg
     4021 atggttgtta ttacagggga aggctcaagg tagtcttaat ttacttaata agttcaaata
     4081 aaagttacat tttaaagatt gtgaccaatt gttacagtat aacgaggaat cccttgagac
     4141 agtatcaaat ggcattaaga aatatgtgcc atcattgatt tgcgtggcta taaatactat
     4201 tcatctgatg agatagccat gttaagaaat tgaaagtata gcattaaagg ggtttgtaac
     4261 agttgaaaat tatatattgt attactaaag cagacaatgg tggtgcacaa acacatctca
     4321 ttcaactcgc caaccatttt tgcgtacacc atgatgttta tgtcattgta ggcaatcatg
     4381 gaccaatgat tgaacaacta gatgcaagag ttaatgtaat tattctcgaa catttagtag
     4441 gtccaattga ctttaaacaa gatattttag ctgtcaaagt gttagcacag ttattctcga
     4501 aaattaaacc tgatgttatc catttacatt cttccaaagc tggaacggtc ggacgaattg
     4561 cgaagttcat ttcgaaatcg aaagacacac gtgtagtttt tactgcacat ggatgggctt
     4621 ttacagaggg tgttaaacca gctaaaaaat ttctatattt agttatcgaa aaattaatgt
     4681 cacgtattac agatagcatt atttgtgttt cagatttcga taaacagtta gcgttaaaat
     4741 ctcgctttaa tcgattgaaa ttaaccacaa tacataatgg tattgcagat gttcccgctg
     4801 ttaagcaaac gctaaaaagc caatcacata acaatattgg cgaagtagtt ggaatgttgc
     4861 ctaataagca agatttacag attaatgccc cgacaaagca tcaatttgtt atgattgcaa
     4921 gatttgctta tccaaaattg ccacaaaatc taatcgcggc aatagagata ttgaaattac
     4981 ataacagtaa tcatgcgcat tttacattta taggcgatgg acctacatta aatgattgtc
     5041 agcaacaagt tgtacaagct gggttagaaa atgatgtcac atttttgggc aatgtcatta
     5101 atgcgagtca tttattatca caatacgata cgtttatttt aataagtaag catgaaggtt
     5161 tgccaattag cattatcgaa gctatggcta caggtttgcc tgttatagcc agtcatgttg
     5221 gcggtatttc agaattagta actgataatg gtatatgtat gatgaacaac caacccgaaa
     5281 ctattgccaa agtcctggaa aaatatttaa tagacagtga ttacatcaaa atgagtaatc
     5341 aatctagaaa acgttattta gaatgtttta ctgaggagaa aatgattaaa gaagtggaag
     5401 acgtttataa tggaaaatca acacaatagt aaatatctaa cattgttact tatcggttta
     5461 gcggttttta ttcagcaatc ttcggttgtt gctggtgtga atgtatctat agctgacttt
     5521 attacattac taatattagt ttatttactg ttttttgcta accatttatt aaaggcaaat
     5581 cattttttac agtttttcat tattttgtat acataccgta tgattattac gttgtgttta
     5641 ctattttttg atgatttgat atttattacg gttaaggaag ttcttgcatc tacagttaaa
     5701 tatgcatttg tagtcattta tttctattta gggatgatca tctttaagtt aggtaatagc
     5761 aaaaaagtaa tcgttacctc ttatattata agcagtgtga ctataggtct attttgtatt
     5821 atagctggtt tgaacaagtc ccctttacta atgaaattgt tatattttga tgaaatacgt
     5881 tcaaaaggat taatgaatga ccctaactat ttcgcgatga cacagattat tacattggta
     5941 cttgcttaca agtatattca taattacata ttcaaggtcc ttgcatgtgg catcctgcta
     6001 tggtctttaa ctacaacggg atctaagact gcgtttatca tattaatcgt cttagccatt
     6061 tatttcttta ttaaaaagtt atttagcaga aatgcggtaa gtgttgtgag tatgttagtg
     6121 attatgctga tattactttg ttttaccttt tataatatca actactattt attccaatta
     6181 agcgaccttg atgccttacc gtcattagat cgaatggcgt ctatttttga agaggggttt
     6241 gcatcattaa atgatagtgg atctgagcga agtgttgtat ggataaatgc catttcagta
     6301 attaaatata cattaggttt tggtgttggc ttagtggatt atgtacatat tggctcgcaa
     6361 attaatggta ttttacttgt tgcccataat acatatttgc aaatttttgc ggaatggggc
     6421 attttattcg gtgcgttatt tatcatattt atgctttatt tactgtttga attatttaga
     6481 tttaacattt ctggtaaaaa tgtaacagca attgttgtaa tgttgacgat gctgatttac
     6541 tttttaacag tatcgtttaa taactcaaga tatgtcgctt ttattttagg aattatcgtc
     6601 tttattgttc aatatgaaaa gatggaaagg gatcgtaatg aagagtgatt cactaaaaga
     6661 aaatattatt tatcaagggc tataccaatt gattagaacg atgacaccac tgattacaat
     6721 acccattatt tcacgtgcat ttggtcccag tggtgtgggt attgtttcat tttctttcaa
     6781 tatcgtgcaa tactttttga tgattgcaag tgttggcgtt cagttatatt ttaatagagt
     6841 tatcgccaag tccgttaacg acaaacggca attgtctcag cagttttggg atatctttgt
     6901 tagtaaatta ttattagcgt taacagtttt tgcgatgtat atcgctgtga ttacaatctt
     6961 tatagatgat tactatctta ttttcctact acaaggtatc tatattatag gtgcagcact
     7021 cgatatttca tggttttatg ctggaactga aaagtttaaa atacctagcc ttagtaatat
     7081 tgttgcgtct ggtattgtat taagtgtcgt tgttatcttt gtcaaagatc aatcagattt
     7141 atcattgtat gtatttacta ttgctattgt gacggtatta aaccaattac ctttgtttat
     7201 ctatttaaaa cgatacatta gctttgtttc ggttaattgg atacacgtct ggcaattgtt
     7261 tcgttcgtca ttagcatact tattaccaaa tggacagctc aacttatata ctagtatttc
     7321 ttgcgttgtt cttggtttag taggcacata ccaacaagtt ggtatctttt ctaacgcatt
     7381 taatatttta acggtcgcaa tcataatgat taatacattt gatcttgtaa tgattccgcg
     7441 tattactaaa atgtctttac atcaatcaca tagtttaact aagacgttag cagataatat
     7501 gaacattcaa ttgatattaa caatacctat ggtctttggt ttgattgcaa ttatgccatc
     7561 attttattta tggttctttg gtgaggaatt cgcatcaact gtcccattga tgaccatttt
     7621 agcgatactt gtattaatca ttcctttaaa tatgttgata agcaggcaat atttattaat
     7681 agtgaataaa ataagattat ataatgcgtc aatcactatt ggtgcggtaa tgaatttagt
     7741 attatgtctt gttttgatat atttttatgg aatttacggt gctgctattg cgcgtttaat
     7801 tacagagttt ttcttgctca tttggcgatt tattgatatt actaaaatca atgtgaagtt
     7861 gaatattgta agtacgattc aatgtgtcat tgctgccgtt atgatgttta ttgtgcttgg
     7921 tgtggtcaat cattatttgc ctcctacaat gtacgctacg ctgctattaa ttgctattgg
     7981 tatagtagtt tatcttttat taatgatgac tatgaaaaat caatacgtat ggcaaatatt
     8041 gaggcatctt cgacataaaa caatttaagt atcggtaacg ctatacttta ggaatttaag
     8101 attaagaaga aaaggcaatt tcttattgaa aaatggaagt tgtctttttt a
//
LOCUS       DAKPJH010000111         8127 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.111, whole genome shotgun sequence.
ACCESSION   DAKPJH010000111 DAKPJH010000000
VERSION     DAKPJH010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8127
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.111"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            48..839
                     /gene="pgeF"
                     /locus_tag="OY092_002216"
     CDS             48..839
                     /gene="pgeF"
                     /locus_tag="OY092_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HCX1077139.1"
                     /translation="MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMA
                     RYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDAL
                     HGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
                     FDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAEL
                     LNYYGVPKENIYTTAYATSEHLELFFSYRLEKGQTGRMLAFIGQQ"
     gene            863..1531
                     /locus_tag="OY092_002217"
     CDS             863..1531
                     /locus_tag="OY092_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HCX1077140.1"
                     /translation="MKDNLQQISTQINDKSEKNNFSTKPNVIAVTKYVTIERAKEAYE
                     AGIRHFGENRLEGFFQKKEALPSDAVIHFIGSLQSRKVKDVINDVDYFHALDRLSLAK
                     EINKRAEHKIKCFLQVNVSGEASKHGIALEDVDQFIDDLKKYDKIEIVGLMTMAPLTD
                     DEAYIRSLFKQLRLKKEEIQRLNLEYAPCDELSMGMSNDYLIAVEEGATFVRIGTKLV
                     GEEE"
     gene            1528..2091
                     /locus_tag="OY092_002218"
     CDS             1528..2091
                     /locus_tag="OY092_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HCX1077141.1"
                     /translation="MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTT
                     KQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCL
                     FEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTD
                     IFLCTPDNVEVAGSITDHIENMEHSFD"
     gene            2103..2393
                     /locus_tag="OY092_002219"
     CDS             2103..2393
                     /locus_tag="OY092_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HCX1077142.1"
                     /translation="MDINVLATIFKFILFVVEIYYFGMIIYFFTSWVPSIRETKVGYL
                     LAKIYEPFLQPFRKVIPPIGIIDISSIAAIIVLVLFQKGLLQIFNWILIQLQ"
     gene            2503..3282
                     /locus_tag="OY092_002220"
     CDS             2503..3282
                     /locus_tag="OY092_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001827493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HCX1077143.1"
                     /translation="MINIDIYQHFRQEEYELIDQLTDKCDQAEHHYAPVLTHFLDPRG
                     QYILEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVT
                     LKHQHILGTLMSLGIEREQVGDIIVNERIQFVLTSRLESFIMLELQRIKGASVKLYTI
                     PVTDMIQSNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKRVKVNHTIVDSA
                     DFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK"
     gene            3306..3923
                     /locus_tag="OY092_002221"
     CDS             3306..3923
                     /locus_tag="OY092_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HCX1077144.1"
                     /translation="MPFTPNEIKNKEFSRVKNGLEPTEVANFLEQLSTEIERLKEDKK
                     QLEKVIEERDTNIKSYQDVHQSVSDALIQAQKAGEETKQAAEKQAEAIIAKAEAQANQ
                     MVGDAVEKARRLAFQTEDMKRQSKVFRSRFRMLVEAQLDLLKNEDWDYLLNYDLDAEQ
                     VTLENIHHLHENDLKPDEVAANAQNNASNTPDNNQQSNDSETTKK"
     gene            4144..6897
                     /gene="ileS"
                     /locus_tag="OY092_002222"
     CDS             4144..6897
                     /gene="ileS"
                     /locus_tag="OY092_002222"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HCX1077145.1"
                     /translation="MDYKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKN
                     KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE
                     QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGNFNNPYITLKPEYE
                     AAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDDK
                     GVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALD
                     WDKASIKLEKEYTGKELEYVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDD
                     YIVGQKYELPVISPIDDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKGALLKLDFITH
                     SYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGE
                     WVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGF
                     THPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSS
                     ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSS
                     TDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLL
                     NRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRS
                     MQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEVDQALLDKW
                     RTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVS
                     QVKVVDKLDDQATAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVVK
                     SLV"
     gene            7188..7985
                     /locus_tag="OY092_002223"
     CDS             7188..7985
                     /locus_tag="OY092_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000274854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1077146.1"
                     /translation="MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQ
                     YEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLPQISDLANLLIHLSEYDIPVNGG
                     IQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWL
                     GIPDDAIIGALHIKTIHLSEVKEYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDW
                     VSATKRVENFDTYGLAIVDFHYLETTHLNLQGPDGIYYRFNHIEVEG"
BASE COUNT         2977 a         1148 c         1535 g         2467 t
ORIGIN      
        1 gtacagttag acgaagataa tttaaatgaa atgatggtga cgatcgagtg aatgataatt
       61 ttaaaaagca accgcatcat ttaatatatg aagaattatt acaacaaggt attactctag
      121 gtattacaac tagaggcgat ggtttaagtg actatcctaa aaatgctttt aatatggcga
      181 gatatattga tgatcgccca tataatatta ctcaacatca attgcaatta gctgaagaaa
      241 ttgcgtttga tagaaaaaat tgggtgtttc ccatccaaac acatgaaaat aaagtcgctt
      301 gtattacaaa ggatgatata ggcacaaata tagacacttt aactgatgcg cttcatggta
      361 ttgatgcgat gtacacatat gatagtaatg tcttattaac gatgtgttat gcagactgtg
      421 taccagtata tttttatagt acaaaacatc attttattgc attggcgcat gcaggttggc
      481 gtggtaccta tactgaaatt gtaaaagaag tgctaaaaca tgtgaacttt gatttgaaag
      541 acttacatgt cgttattgga ccatctacat catcaagtta tgaaattaat gatgatatta
      601 aaaataaatt tgaaacattg ccaattgata gtgccaacta tattgaaact agaggacgag
      661 atcgtcatgg tattgatttg aaaaaagcca atgctgaatt attaaattat tatggtgttc
      721 ctaaagaaaa tatttatacg acagcgtatg ctacatctga acatttagaa ttatttttct
      781 cttatcgatt agaaaaaggt caaacaggac gcatgttagc attcattggt caacagtaaa
      841 caaggaggag atatgtttgc gtgtgaaaga taatttacaa caaatctcaa cacaaattaa
      901 tgacaaaagt gaaaaaaata atttttcaac aaaaccaaac gtgattgcag ttacaaaata
      961 tgttacaata gagcgagcta aagaagcgta tgaggctgga ataagacatt ttggtgagaa
     1021 tagattggaa ggcttttttc aaaagaaaga agcattacca tcagatgcgg tgattcattt
     1081 tataggatca ttacaatctc gaaaagttaa ggacgttata aacgacgtag attatttcca
     1141 tgctttagat cgattgagct tagccaaaga aattaacaaa cgtgcagaac ataaaattaa
     1201 atgtttcttg caagtgaacg tttcgggaga agcttctaaa catggtattg ctttagaaga
     1261 tgttgatcag tttatagatg atcttaaaaa atatgacaaa atcgaaattg taggtttaat
     1321 gacgatggca ccattgacag atgatgaagc atatattaga tcgttattta aacagttacg
     1381 tttgaaaaaa gaagaaatac aacgactcaa tttagaatat gcgccttgtg atgaattatc
     1441 aatgggaatg agtaatgact atcttattgc agttgaagaa ggtgcgacgt ttgttagaat
     1501 tgggactaaa cttgtaggag aagaggagtg agccacttgg ctttaaaaga tttatttagt
     1561 ggattttttg taatagatga tgaagaggaa gtagaagtac ctgacaaaca acaacaggtc
     1621 aatgaagcgc cagcaaaaga gcagtcacaa caaacaacaa aacaaaacgc aatcaaatca
     1681 gtccctcaaa aatctgcatc aagatataca acaacgtcag aagaaaggaa taaccgtatg
     1741 tctaattatt caaaaaataa ttcacgtaat gttgtaacta tgaacaatgc tacaccaaac
     1801 aatgcatcac aagaaagttc aaaaatgtgt ttattcgaac cacgtgtttt ctcagataca
     1861 caagatattg ctgatgagct taaaaaccgc cgtgcgacac ttgtcaattt acaacgtatt
     1921 gataaagtat cagcgaaaag aattattgat tttttaagcg gtactgttta tgcaatcggt
     1981 ggagatatcc aacgtgtagg tactgatatt ttcttatgta cgcctgataa tgtggaagta
     2041 gctggaagca ttacagacca tattgaaaat atggaacatt cattcgacta aggagttaac
     2101 atatggatat aaatgtgcta gctacaatat ttaaatttat cctttttgtt gttgaaattt
     2161 attatttcgg catgattata tatttcttta catcttgggt accaagtatt agagaaacta
     2221 aggtaggtta tttattagcg aaaatatatg aacctttctt acaaccattt agaaaagtaa
     2281 ttccacctat tggaattatc gacatatcat caatcgctgc aattatcgtt ttagtattat
     2341 tccaaaaagg gttactccaa atctttaatt ggattttaat tcaattacaa taaattaagc
     2401 gacataacga ggcaagggta catgatactt tagcctcgtt tttgatatgt atttttctga
     2461 atataagggc aatagatggt attttataaa ttttttaagg tagtgattaa catagatatt
     2521 tatcaacact ttaggcagga agaatacgaa ttaattgatc agctaacgga taaatgtgat
     2581 caagcggaac accattatgc accagtatta acgcattttt tagatccaag agggcaatat
     2641 atattggaag tgatttgtgg cagttatgaa gatttaaacg tatcttttta tggcgggcct
     2701 aatgctgaaa gaaaaagagc aatcatttcg ccgaactatt atgaacctaa agaaagtgac
     2761 tttgaattaa ctttaatgga aatagagtat cctgaaaaat tcgtcacttt aaaacatcaa
     2821 catattttag ggacattaat gtctttaggt atcgaacgcg aacaagttgg agatataatt
     2881 gtgaatgaac gaattcaatt tgttttgaca agtagattgg aatcatttat tatgttagaa
     2941 ttacaacgta ttaaaggcgc atcagttaaa ctttatacta ttccagtaac agatatgata
     3001 caatctaatg agaattggaa aaatgaaagt gcaacagtta gttctttaag gttagatgtt
     3061 gttattaaag aaatgatacg taaatcacgt acgattgcga aacaactaat cgaaaaaaaa
     3121 cgtgttaaag tgaatcacac tattgttgat tcagcagatt ttcaattaca agcaaatgat
     3181 ttaatatcca tccaaggttt tggtagagca cacattactg acttaggtgg taaaactaaa
     3241 aaagataaaa cgcacattac ctatagaaca ttattcaaat agtaatgatt taaggaggat
     3301 aacaaatgcc ttttacacca aatgaaatta agaataaaga gttttcacgt gtaaagaatg
     3361 gtttagaacc tactgaagtt gctaattttt tggagcaact aagcactgaa attgaacgtc
     3421 ttaaagaaga taaaaaacaa cttgaaaaag taatcgaaga gagagatact aatattaagt
     3481 cttatcaaga cgtgcatcaa tctgtaagtg atgctttgat acaagcccaa aaagctggtg
     3541 aagaaactaa acaagctgca gagaaacaag ctgaagcgat tatagctaag gcagaagcgc
     3601 aagctaatca aatggttggt gacgcggtag aaaaagcacg ccgtttagca ttccagactg
     3661 aagatatgaa acgtcaatca aaagtattta gatcgcgttt ccgtatgtta gttgaagcgc
     3721 aattagactt attaaaaaac gaagattggg attacttgtt gaattatgat ttagacgctg
     3781 aacaagtgac gcttgaaaat attcatcatt tgcatgaaaa tgatttaaag ccagatgaag
     3841 ttgcagcaaa tgcacaaaat aatgcatcaa atacaccaga caataatcaa caatccaatg
     3901 attcagaaac aactaagaag taagaattaa ataaagacag acgcgtaata tacatttaac
     3961 ttttcacagc gaattaggta atggtgagag cctagtaaaa gcatgtatgt tatatcactg
     4021 gctttttaat atttaaataa tgtaatgaga gaactctaag ttgagttaat aagggtggta
     4081 ccgcgagcaa tcgtcccttt taatttaact tagagttttt taaattttta aggagtgaaa
     4141 aaaatggatt acaaagaaac gttattaatg cctaaaacag atttcccaat gcgaggtggt
     4201 ttaccaaaca aggagccgca aattcaagaa aaatgggatg cagaagatca ataccataaa
     4261 gcgttagaaa aaaataaagg taacgaaaca ttcattttac atgatggccc accatacgcg
     4321 aatggtaact tacatatggg acatgccttg aacaaaattt taaaagactt tattgtacgt
     4381 tataaaacta tgcaagggtt ctatgcacca tacgtaccag gttgggatac acatggttta
     4441 ccaattgaac aagcattaac gaaaaaaggt gttgaccgaa agaaaatgtc aacagctgaa
     4501 ttccgtgaga aatgtaaaga atttgcttta gaacaaattg aattacagaa aaaagatttt
     4561 agacgtttag gtgttcgtgg taactttaat aatccatata tcacattaaa acctgaatac
     4621 gaagctgcac aaattcgtat ttttggagaa atggcagata aaggtttaat ttataaaggt
     4681 aaaaagccag tttattggtc tccttcaagt gagtcttcat tagcagaagc agaaattgaa
     4741 tatcacgata aacgttcagc atcaatttac gttgcatttg acgttaaaga tgacaaaggt
     4801 gtcgttgatg cagatgctaa atttattatc tggacaacaa cgccatggac aattccatca
     4861 aatgttgcga ttaccgttca tcctgaatta aaatatggtc aatacaatgt aaatggcgaa
     4921 aaatatatta ttgcagaagc cttatctgac gctgtagcag aagcactgga ttgggataaa
     4981 gcatcaatca aattagaaaa agaatacaca ggtaaagaat tagagtatgt tgtagcacaa
     5041 catccattct tagacagaga atcgttagtg attaatggtg atcatgttac tacagatgct
     5101 ggtacaggtt gtgtacatac agcaccaggc cacggggaag atgactatat tgttggtcaa
     5161 aaatatgaat taccagtaat tagtccaatc gatgataaag gtgtatttac tgaagaaggc
     5221 ggccaatttg aaggaatgtt ctatgacaaa gctaataaag ccgttactga tttattaaca
     5281 gaaaaaggtg cactattaaa attagacttt attacacata gctatccaca cgactggaga
     5341 acaaaaaaac ctgtaatctt ccgtgctaca ccacaatggt ttgcttcaat cagtaaagta
     5401 agacaagata ttttagatgc aatcgaaaat acaaacttca aagtaaattg gggtaaaaca
     5461 cgtatttaca atatggttcg tgaccgtggc gaatgggtta tttctcgtca acgtgtttgg
     5521 ggtgtaccgt taccagtatt ttatgctgaa aatggcgaaa ttatcatgac gaaagaaaca
     5581 gtgaatcatg ttgctgattt atttgcagaa cacggttcaa atatttggtt tgaaagagaa
     5641 gcgaaagact tactaccaga aggatttaca catccaggca gccctaacgg tacatttact
     5701 aaagaaacag acattatgga cgtttggttt gattctggtt catcacaccg tggcgtgttg
     5761 gaaacaagac cggaattaag tttcccagca gatatgtatt tagaaggtag tgaccaatat
     5821 cgtggttggt tcaactcttc tatcacaact tcagttgcta caagaggagt atcaccttat
     5881 aaattcttac tttctcatgg ttttgttatg gatggtgaag gtaagaaaat gagtaaatct
     5941 ttaggtaatg tgattgtacc tgaccaagtg gttaaacaaa aaggtgctga tattgcgaga
     6001 ctttgggtaa gtagtacgga ctatttagct gatgttagaa tttctgatga aattttaaaa
     6061 caaacatctg atgtttatcg taaaatcaga aatacattaa gatttatgtt aggtaacatt
     6121 aacgatttca atcctgacac agatagcatt cctgaatcag agttattaga agtggatcgt
     6181 tacttgctaa atcgtttacg tgaatttact gcaagtacga ttaacaacta tgaaaacttt
     6241 gactacttaa atatttatca agaagttcaa aactttatca atgttgagtt aagtaatttc
     6301 tatttggatt acggtaaaga cattttatat attgaacaac gtgattctca tatccgtcgc
     6361 agtatgcaaa cagtgttata tcaaatttta gttgatatga cgaagttgtt agcaccaatc
     6421 ttagtgcata cagctgaaga agtttggtct catacaccac atgttaaaga agaaagtgtt
     6481 cacttagcag acatgcctaa agttgtagaa gtagatcaag ctttattgga taaatggcgt
     6541 acatttatga atttacgtga tgatgtgaat cgtgcattag aaactgctcg taatgaaaaa
     6601 gttattggta aatcattaga agctaaagtt acgattgcta gtaacgataa atttaatgca
     6661 tctgaattct taacttcatt tgatgcatta catcaattat ttatcgtgtc acaagttaaa
     6721 gttgtagata agttagatga tcaggcaaca gcttatgaac atggtgatat tgtcatcgaa
     6781 catgcagatg gtgaaaaatg tgaaagatgt tggaactatt cagaggatct tggtgctgtt
     6841 gatgaattga cgcatctatg tccacgatgc caacaagttg taaaatcact tgtataattg
     6901 aaattgtata aagtactcat acagatgata taaattaaag ctctcttcat aatcatgttg
     6961 tagtttttgt tgacatgatg aagggagttt ttttacgaat aaaaaaatga ccaagttact
     7021 ggttatatgt gttaaaaaat gtgtaattta ctaaaataaa aattattcag gaatggtaca
     7081 aattctctaa ggcttataaa tgcgttatag ttgctattct caattatgtt cgcgataatt
     7141 ttaagtaaaa gtaagcacag atattgaatt tgataggagt taattgaatg tatcataaca
     7201 gtaacgcaaa ctttgtaaat ggtatcactt taaatgtaag agataagaat gaattaaagc
     7261 cattttatga ggacgtatta ggattaaata ttataaatga gacattaaca tcgatacaat
     7321 atgaagtagg ccaaaataat catgtcatta cacttgttga attacaaaat ggacgtgaac
     7381 ctttaatgtc cgaagcggga ctgtttcata tcgcaattaa actacctcaa attagtgatt
     7441 tagctaattt actaattcat ttaagcgaat atgatattcc agttaacggt ggtatacagc
     7501 ctgcttcgtt atcattattt tttgaagacc cggaaggaaa cggttttaaa ttttatgttg
     7561 ataaagacga agcgcaatgg acgaggcaaa atgatttagt aaaaattgat attagaccat
     7621 taaatgtacc gagattagtg agtcatgcaa caaaattgtt atggttaggt attccagatg
     7681 acgctattat aggtgcattg catattaaga caattcattt atcagaggta aaagagtact
     7741 acctcgatta ttttggatta gagcaatcgg catatatgga tgattattca atatttttag
     7801 catcgaatgg ctattatcaa catttggcca tgaatgattg ggtatcagca acgaaacgtg
     7861 tagaaaattt tgatacgtat ggattagcaa ttgttgactt tcattatctt gaaacaacac
     7921 atttaaattt acaaggtccg gatggtatct attatcgctt taatcatatc gaagttgaag
     7981 gttagtatat gctttgaatg gacgaaccat ataatgaatc gtttttaatg atctttttat
     8041 acaagctatg aaggaggctg ggacataaat ccctaaaaaa cagcagtaag ataattttca
     8101 attagaaaat atcttactgc tgttctc
//
LOCUS       DAKPJH010000112         8092 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.112, whole genome shotgun sequence.
ACCESSION   DAKPJH010000112 DAKPJH010000000
VERSION     DAKPJH010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8092
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.112"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            169..369
                     /locus_tag="OY092_002224"
     CDS             169..369
                     /locus_tag="OY092_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCX1077147.1"
                     /translation="MNNGTVKWFNAEKGFGFIEREDGSDVFVHFSAIAEDGYKSLEEG
                     QKVEFDIVEGDRGEQAANVVKM"
     gene            complement(865..1083)
                     /locus_tag="OY092_002225"
     CDS             complement(865..1083)
                     /locus_tag="OY092_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077148.1"
                     /translation="MSEWHINNQSTKPFLIQQAEEQLSIVKPLPNGSFQILTEIDLEN
                     GNVNNIDHSLLVSVDLKALEISIFDAVN"
     gene            complement(1145..1429)
                     /locus_tag="OY092_002226"
     CDS             complement(1145..1429)
                     /locus_tag="OY092_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077149.1"
                     /translation="MNELTKEQKYTIAKFYKLYIERSNKGETETVANFFGDAKDAREN
                     YFCDRDYQDFLTNCQILIQNKYLTGEVLDDNIYNISILNKTFIEFEQNFG"
     gene            complement(1517..2086)
                     /locus_tag="OY092_002227"
     CDS             complement(1517..2086)
                     /locus_tag="OY092_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077150.1"
                     /translation="MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLKPG
                     DIIVTKGPVMWGFFGHCSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKV
                     YRCSYPGAGKKAAEWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSV
                     KSYGLHIISPYAIKDNFIDPYKLRLVKAY"
     gene            complement(2274..2462)
                     /locus_tag="OY092_002228"
     CDS             complement(2274..2462)
                     /locus_tag="OY092_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077151.1"
                     /translation="MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVI
                     LYIFGFAILIYTFIFGVL"
     gene            complement(2491..2751)
                     /locus_tag="OY092_002229"
     CDS             complement(2491..2751)
                     /locus_tag="OY092_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077152.1"
                     /translation="MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICG
                     VILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPIFYSFIG"
     gene            3091..3294
                     /locus_tag="OY092_002230"
     CDS             3091..3294
                     /locus_tag="OY092_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HCX1077153.1"
                     /translation="MTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYV
                     MSNYTDHQLIETTNRAISLYMAN"
     gene            complement(3291..3527)
                     /locus_tag="OY092_002231"
     CDS             complement(3291..3527)
                     /locus_tag="OY092_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077154.1"
                     /translation="MDNHNQCNYVNPQNVSLDWECFIISKSEMLLDGVPNELINTWLD
                     KDIITPFSIRNDEINFKTKDIWDALIHHNWYYSN"
     gene            3752..4333
                     /locus_tag="OY092_002232"
     CDS             3752..4333
                     /locus_tag="OY092_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HCX1077155.1"
                     /translation="MAKTLYLMRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYY
                     ETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGLFEGESVYLFDNLYK
                     PEDLFGDRIVPFKGEARQQVEDRIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKL
                     DEALKHNIGNCNILKFEYDNGTFKFVELIDPNL"
     gene            complement(4406..5023)
                     /locus_tag="OY092_002233"
     CDS             complement(4406..5023)
                     /locus_tag="OY092_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HCX1077156.1"
                     /translation="MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAII
                     TAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGEAQ
                     IMSPMTQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
                     LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLIF"
     gene            complement(5177..5671)
                     /locus_tag="OY092_002234"
     CDS             complement(5177..5671)
                     /locus_tag="OY092_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077157.1"
                     /translation="MIKIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDI
                     LNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINF
                     IINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYD
                     LINK"
     gene            complement(6070..6492)
                     /locus_tag="OY092_002235"
     CDS             complement(6070..6492)
                     /locus_tag="OY092_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HCX1077158.1"
                     /translation="MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPE
                     QLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDPDSESPKLSVSIDATIKN
                     VISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD"
     gene            6640..7356
                     /locus_tag="OY092_002236"
     CDS             6640..7356
                     /locus_tag="OY092_002236"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HCX1077159.1"
                     /translation="MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENV
                     TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDLYLNLISDLANINGIDMID
                     IEWREDIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVK
                     LAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIG
                     EAQAPGQIDVTDLKAQVTLY"
     gene            7439..7978
                     /locus_tag="OY092_002237"
     CDS             7439..7978
                     /locus_tag="OY092_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HCX1077160.1"
                     /translation="MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMRE
                     PWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQN
                     DENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
                     LEEDMPKAPRKNRNLITLY"
BASE COUNT         2918 a         1148 c         1276 g         2750 t
ORIGIN      
        1 cacagaaaat aaaataatgc tttacttcta tatttaaaag tgtataatga aagttaagta
       61 ataaagagcg tgaagaaaaa tgtgagttat ttatatagaa tattctcctt ttcatttatg
      121 aatttgttac aaaatattta gtgcaaaagc acgacggagg tattcaatat gaataacggt
      181 acagttaaat ggtttaatgc agaaaaaggt tttggtttca tcgaaagaga agatggtagc
      241 gacgtattcg tacacttctc agcaatcgct gaagatggat acaaatcatt agaagaaggc
      301 caaaaagttg aattcgacat cgttgaaggc gaccgtggcg agcaagctgc aaacgtagtt
      361 aaaatgtaat tttaactttt tcaaacagtc cttagtatag ggctgttttt ttatgcttta
      421 aatcgataac agttggtgtg gtaaaagcac tagctgttac ttttttgtcc aataaatata
      481 ggtggagatc taacaatata taatggttct aaaataaatc gaactgatgg aaaagttttt
      541 tacttttcat ctgtccgact tttgattttg aataaaaaaa agcgccaata cagaacttta
      601 ataatgacga gaattaaagt ctgtatatgg cgataacaag aagtaatgtt aaacactcaa
      661 aatgtttaac aataatagga taccacatcg cataatatct tactacttaa ttaataattt
      721 aactaatcaa ctttttgtta attttttatt aagactgatt aattattgag aatatttatt
      781 gtttttaaaa tctcataata attcagtaat cttgttttca tttaaaaggc ggaacattaa
      841 aataattaaa taaaaatatt gcgtttaatt tacagcgtca aatatactta tttctaatgc
      901 tttgaggtct acagaaacaa gtagagaatg atcgatgtta ttaacattgc cattctccaa
      961 atctatttct gtgagtattt gaaagctacc attaggcaat ggtttaacaa tagacaattg
     1021 ctcctccgct tgttgtatta aaaaaggttt tgtagattga ttattaatat gccattcact
     1081 catgtatgtt tttcactcct gctttaatat agggttaaaa agtttatagt tgagacattc
     1141 atgctcaacc aaaattttgt tcaaattcaa taaatgtctt gtttaaaata gaaatattgt
     1201 aaatgttatc gtccaaaact tcaccagtta agtatttgtt ttgaattaaa atttggcagt
     1261 tagttaagaa gtcttgataa tcacgatcgc aaaaatagtt ttcacgtgca tctttagcat
     1321 cgccaaaaaa gttagcgact gtttctgttt ctcccttatt cgaacgttca atatataatt
     1381 tgtaaaattt agctattgta tacttttgtt ctttagttag ttcattcaaa atattgggcc
     1441 tcctgaatta tcatttgtaa tctataccca atttattgca aaacacaaac taatttaact
     1501 atttgatgaa actgtgttaa taagctttaa caagccttag tttgtatgga tctataaaat
     1561 tatctttaat tgcatagggt gaaataatat gtagtccgta acttttaact gatttttcac
     1621 ttacaccaaa tttataagct tggtagataa ttttagtaca atacgtaaat tttttgctgt
     1681 tcaaatttaa tgtaactaga taacgatgat ttgtattttc atagtttttc ttaacccatt
     1741 cagccgcttt tttacctgca ccaggatagc tgcaacgata aactttcatc caatcatttt
     1801 tgccacttgc ataattatat ttaaaagatt cgaaggattg tgtagttggt ttgtcgccag
     1861 gcccctcaat ttgtaaaatc gttttatcat caatcgcgat actacaatga ccaaaaaatc
     1921 cccacatgac agggcctttt gtaacaataa tatcaccagg ttttaattgg aatttgtcat
     1981 cttgaatttc tgaatactta ttatctgcaa ttgtttttgg tgagtttata ggggatacga
     2041 caacgaataa tataagtaaa attatcgttc gtttaatata gttcacttaa aagctccttg
     2101 ctgaagaaat atatgtgaat agtcttaaat tagaattgta atctttaata agcatttaag
     2161 actaaaacat atcttaaata ttaaagtatg agagtgtgaa atgtctatta agaataaaaa
     2221 acagtctgaa acatcattgg aacgtttcag actggatata aaatgatttt catttatagc
     2281 acaccaaata taaatgtgta tattaatata gcgaatccaa aaatatagag aatgacagta
     2341 aaacttaaat aggactcttt tttagattct ttgccagttt ttttcattaa tacgagtata
     2401 aacgtagcgg caactaagaa aattaatgct agccaaaaca gaattgcaaa atgtaaagac
     2461 atgtgaaacc ctccttatat accgtaatta ttaacctata aaactataaa aaataggata
     2521 aatgtaatag agaacgagta cgatatttat aaaaaataat atttcactta accagttttt
     2581 agttatcatt gcaatggtaa aggatacgat gagtatcaca ccacaaatga taataccagg
     2641 caggagccaa cataaatcat ctaaatcttt attatatgtg attaaaatat taaagataac
     2701 aaaagtggta gtaataacta tattgatagc atttaacaaa atgttattca tgactgacac
     2761 ctactagtat aaaaatagct tcttaataaa tatgataaca ctattttcca ataggtaaat
     2821 aaaaagtata gttattttta aaatattatt gtagaatgct aaagtttatt aattcaaaca
     2881 agtgagcata tatagaggtg tgtagtatta atatgaaaag aatatttaca aactaaaaac
     2941 ctttaaaatt gtataattcg ttaatatttt tagaatcaga taacaaaaaa atgtgcaaaa
     3001 tcacttttgc acatttacaa atactagttt tctgataaga ttaataataa cactttaaat
     3061 agcgcttaat aaatgaaggg ggtaagtctt atgacgtttt acaatttcat catgggtttt
     3121 caaaatgata acacaccatt tggcatattg gccgaacacg ttagtgaaga taaagcattc
     3181 cctcgattag aagaaagaca ccaagtaatt agagcatatg tgatgtctaa ttacacagat
     3241 catcaattaa ttgaaactac aaatagagct attagcttat atatggcaaa ttaatttgag
     3301 tagtaccaat tatgatgtat tagtgcatcc caaatatctt ttgttttaaa gtttatttca
     3361 tcatttctta tcgaaaatgg tgtaataatg tctttatcta accaagtgtt gataagttca
     3421 tttggtacac catctaacaa catttcactt ttactaatta taaaacattc ccagtcaagt
     3481 gaaacatttt gtggattcac ataattacat tgattatgat tatccataaa cactcactcc
     3541 tttaaaattc tgtactcttc attgcgtttt accccgtcac attatctttt aaactaaaat
     3601 catcattact tatgaaaaaa atgttcatca aaagcaaagg tttttgctac cgaaaaagtt
     3661 taaataatgg tttaatatat ttggtactca ttttaataaa aagagaatac attttgagct
     3721 atcaatactt tttattgaag aggtgttatt gttggctaaa acgttatatt taatgcgcca
     3781 cggacaaact ttgtttaatt ttaagggact aattcaggga tttggagatt cgccgctaac
     3841 agaacttgga attgctcaag ctcaaaaggc acgtagttat tatgaaacta aggggataaa
     3901 cttcgattta tatgcatcat caacgcaaga acgcgcaagt gacacacttg aaaatgttgc
     3961 acctaaccaa tcgtatcaac gttttaaggg actgaaggaa tggcattttg gattatttga
     4021 aggtgagtca gtctatctat ttgataatct atacaagcct gaggacttat tcggagatcg
     4081 aattgttcct ttcaaaggag aggcaaggca acaagttgaa gatcgcattg tgaaaacttt
     4141 acatgacatt atgtctcaaa caaagaataa tgcattagtc gtgagtcatg gaacaataat
     4201 gggagtattt ttaagatatt gccttaaact agatgaagca ttaaagcata atatcggtaa
     4261 ttgtaatatc ctgaaatttg aatatgacaa tggaacattt aaatttgttg agttaattga
     4321 tccaaattta taataaataa agcgttatac atagacacaa gtatgtcttt tgtataacgc
     4381 ttttaaaata caactatata acgctttaga atattaattg aataagtttt tgtaatatca
     4441 tcagagcaac aataataatt attatgcttg atattttatt gattattgtt aataattttc
     4501 cggttttatc aattgatcca accatttttc ctaaaattgc gagtaaaaag aaccataacc
     4561 atgaaacgct aatacaagcg attgtaaacg caattttatt gctgccacta tataatgcag
     4621 cactactacc aattacacca attgtatcta aaatagcatg tggattgagt aatgaaactg
     4681 ataaagcaaa acttacttgt gtcattggag acataatttg agcttctcca tctgttgagg
     4741 gtttatcatg ccaaatggtc caagccatat acatcaagaa aattaaacca actatataaa
     4801 taattgcttg aagtacaggt aaagacataa taatgataga tactcctacc actgcaataa
     4861 tgataagtaa gctgtctgac aacccggctg taattattgc aggcaataca tatctatatt
     4921 ttggttgatt agctccttgg ttaaaaataa atacattttg tgcacctaaa ggtaaaatta
     4981 gaccaatcgc taagataaat ccatgaataa ttgcggttac cattaagttt tgacacccct
     5041 aaaacataga atattctgaa aaaacttatt gatatcatac caaaaaaaaa caactactca
     5101 atagtagagt agttgtatga aaaatagaac ctatatgatt tgaatttatg agaaatgtag
     5161 aatatataaa actgtattac ttattaatca aatcataaaa aagccaatgt tcatcgaaat
     5221 aggtgtttcc gattttaatt gcatttttct caaaaccaag aatgtcgaat cctagtgcac
     5281 tatagaaaac tttagcacct atgttgtttg acacaattga tgtaagtaaa gattcgtaat
     5341 tgttctgccg tgcataatta ataatgaaat taatgagctc gctattaatc gatttatcgt
     5401 tattagtaac aaagttgtat ttaattaatg atttatgttc ttttccaacg tatcgaattt
     5461 gttctaaggc agctgttgcg ataagtgttt cgttttcata acagccaaat acaatacatt
     5521 tcggtgaacc ttgatttaaa atgtcatgta ttaaggtgtc agtcattgtt tgactataat
     5581 gtgaatcttg agtgaattct tcattgactg tcgaaacaag tctcttatac tcattaaaat
     5641 cattattcgt taatgtttta attttaatca ttactgacct ccttaatcat tattaagaaa
     5701 gattttgtac taaaaaaatt tcttaattac atattaaaat gtttattaaa attttgcaat
     5761 cattgattta tatgcacatt cttgtaaatg gattatcaat ttaattatat ttatttttaa
     5821 gttcaggaaa ttatggaatt ggttattggt cgacactgga cttttatttg tagacggtat
     5881 gcgaagaagt caagccagta ttggaaccgg tcacatttat gatgactaag ggacaatcat
     5941 tttcagttaa atattgccag aaatttcaat cacgaataga aaaaataacc aaccaaaaat
     6001 ttttggttgg caaatttgaa ttttatgtga attttattaa taacgttgaa taatctcttt
     6061 aagttaatgc taatctacaa catttacatt taaatcgaca ttaatatttc cttgagtcgc
     6121 ttttgaatat ggacaaaatt catgagccat ttgtaaatat ttttcagctt cttcttgaga
     6181 tataacattt ttaattgtcg catcaattga aacacttaat ttaggacttt ctgagtctgg
     6241 atcatcttct agtctcactg ttagtgttac ttctggatga gcatcacgca ctttgttttg
     6301 ctttaaaatt aggtcgaagg caccgttgaa gcaagatgca taacctgctg caaataattg
     6361 ttcggggtta gtagctttac catctgcttg agcaggcgga acgatatcaa tatctaatgc
     6421 tcgatcatca gtataaacat gtcctttacg tccgccaaca ttcgtcgctt tagtttcata
     6481 atgtattgcc atacttataa cctcctaatt taaaatacat ttatgcttta cccattcgaa
     6541 aataccttaa tcattttcat ttatagcatt gtttgattga aggataaaaa gttgttgttt
     6601 acaataaaaa taatgagtat ctgaaatgag ggatttacta tgacacatgt ggaagtagta
     6661 gcgactatcg cgccacaatt atctatcgaa gaaactttaa ttcaaaaaat taatcatcgt
     6721 attgatgcaa tagacgtatt agaattacga attgatcaaa ttgaaaatgt cacagttgat
     6781 caagtggcag aaatgattac aaagctgaag gttatgcaag attcattcaa attattggtt
     6841 acgtatcgta caaagttaca aggtggctat gggcaattta caaatgactt gtatcttaat
     6901 ttaatatcag acttagcaaa tatcaatggc atagatatga ttgatataga atggcgagaa
     6961 gatattgaca ttgaaaaaca tcaaagaatc attacacatt tgcaacagta taataaagag
     7021 gtggtcatat cacatcataa tttcgaaagt acgcctccat tagatgaatt gcaatttata
     7081 ttttttaaaa tgcaaaaatt caacccagaa tacgttaaat tagcagtaat gccacataat
     7141 aaaaatgatg tgttaaattt attgcaggca atgtctacat tttcagatac tatggactgc
     7201 aaagttgttg gtatttcaat gtctaaactt ggactaataa gtagaacggc tcaaggcgtt
     7261 tttggtggtg cgttgactta tggttgtatc ggagaagcac aagctccagg acagattgat
     7321 gttactgatt taaaagcaca agtgacttta tactaataaa atgaattagg ttgcttttgt
     7381 gtaagtgctg tcttataatt gagaagtatt atcattgttc gtggaggagc gattttagat
     7441 ggaattacaa caagcaatag ctaatagaag aagtgtgaaa aaatttaaaa gagatatgca
     7501 catagatgac gcattgctat atcaagcaat tgagaaagct gctgatgctc caaatcacgg
     7561 aatgagggaa ccatggagag ttgtgcatgt tccgaaagac agattaggag atatgagtaa
     7621 ggatatttct aaatttgcat ttcctaatga attagataag caacaatgtc attatgatgc
     7681 agtaacgaaa cttggtggca tgttattgct tattttaaaa acagatccaa gacaacgtca
     7741 aaatgatgaa aactactttg catttggtgc atatgcacaa aatcttatgt tgttacttta
     7801 tgaagcggga ataggtacat gttggaaatc gccattatat atctatgatc ctaaagtaag
     7861 aaaaacactt ggtataaaga aagatgaagt tcttgctgga ttcttatatt taacggattt
     7921 agaagaagat atgcctaaag caccacgtaa aaatagaaac ttaattacat tatattaata
     7981 tgtataatta tagaaacatt aataaaagct gagtcatgaa ttgatggaca tctatcgagt
     8041 tagagattta atctaactta ctagagtcgg tacaatcaca gtctcagctt tt
//
LOCUS       DAKPJH010000113         7811 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.113, whole genome shotgun sequence.
ACCESSION   DAKPJH010000113 DAKPJH010000000
VERSION     DAKPJH010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7811
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.113"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            110..5029
                     /locus_tag="OY092_002238"
     CDS             110..5029
                     /locus_tag="OY092_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KxYKxGKxW signal peptide domain-containing
                     protein"
                     /protein_id="HCX1077161.1"
                     /translation="MSKRQKEFHDSLANEKTRVRLYKSGKNWVKSGIKEIEMFKIMGL
                     PFIRHSIVSQDNQSISKKMTGYGLKTTAVIGGAFTVNMLHDQQAFAASDAPLTSELNT
                     QSETVGNQNSTTIEASTSTADSTSVTKNSSSVQTSNSDTVSSEKSENVTSTTNSTSNQ
                     QEKLTSTSESTSSKNTTSSSDTKSVASTSSTEQQTNISTNQSTASNTTSQSTAPASTH
                     LKQTSTTSTSTAPVKLRTFSRLAMSTFASAATTTALTANTITVNKDNLKQYMTTSGNA
                     TYDQSTGVVTLTQDAYSQKGAITLGTRIDSNKSFHFSGKVNLGNKYEGNGNGGDGIGF
                     AFSPGVLGETGLNGAAVGIGGLSNAFGFKLDTYHNTSKPNSAAKANADPSSVAGGGAF
                     GAFVTTDSTGVATTYTSSSTADNAAKLKVQPTNNTFQNFDITYNGDTKVMTVTYAGQT
                     WTRNISDWIAKSGTTNFSLSMTASTGGATNLQQVQFGTFEYTESAVTQVRYVDVTTGK
                     DIIPPKTYSGNVDQVVTIDNQQSALTAKGYNYTSVDSSYASTYNDTNKTVKMTNAGQS
                     VTYYFTDVKAPTVTVGNQTIEVGKTMNPIVLTTTDNGTGTVTNTVTGLPSGLSYDSAT
                     NSIIGTPTKIGQSTVTVVSTDQANNKSTTTFTINVVDTTAPTVTPIGDKSSEVFSPIS
                     PIKIATQDNSGNAVTNTVTGLPSGLTFDSTNNTISGTPTNIGTSTITIVSTDASGNKT
                     TTTFKYEVTRNSMSDSVSTSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKS
                     TSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNS
                     SSTEKSESLSTSTSDSLRTSTSLSDSVSMSTSGSLFKSQSLSTSTSDSASTSQSVSDS
                     TSNSISTSESLSESVSTSESISISNSISNSVSASTSKSESQSTSISLSTSDSKSMSTS
                     ESLSDSTSTSDSVSGSLSVAGSQSVSTSTSDSMSTSEMISDSMSTSGSLAASDSKSMS
                     VSSSMSTSQSVSTSESLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSES
                     DSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTS
                     LRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDS
                     TSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTS
                     NSQFDSMSISASESDSMSTSDSSSISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSIS
                     GSTSLSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMSASTSSSQSTSVS
                     TSLSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDSTSTSTSDSTS
                     GSTSTSISESLSTSGSGSTSVSDSTSMSESDSTSVSMSQSMSGSTYNSTSVSDSESVS
                     TSTSTSLSTSDSTSTSESLSTSMSGSQSISDSTSTSMFGSTSTSESNSMHPSDSMSMH
                     HTHSTSTSRLSSEATTSTSESQSTLSATSEVTKHNGTPAQSEKRLPDTGDSIKQNGLL
                     GGVMTLLVGLGLMKRKKKKDENDQDDSQA"
     gene            5159..6370
                     /gene="secY2"
                     /locus_tag="OY092_002239"
     CDS             5159..6370
                     /gene="secY2"
                     /locus_tag="OY092_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HCX1077162.1"
                     /translation="MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVK
                     HESFFKIAISNMGGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYK
                     ERILTLILSVIQSYFVIHEYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIA
                     GPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDL
                     MNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFILSMFNKDVSDEMPMMTF
                     DSPIGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQA
                     RRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYF
                     DKYKPFLNQYW"
     gene            6381..>7811
                     /gene="asp1"
                     /locus_tag="OY092_002240"
     CDS             6381..>7811
                     /gene="asp1"
                     /locus_tag="OY092_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HCX1077163.1"
                     /translation="MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLEN
                     DLDYRLIVLNHAPNLRTFLHRYDLYETKYWSVFDEIQGFSHHAPQAINYHHLKWPDDV
                     EFVYTPYLLKCVTSEQNYTNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYF
                     DDHGEASYQEYLTINGDCVLYENFKNGRVTVSKRYQHHYQQTEYNNMVQLIEEKFQAM
                     IAQQIHEDDHVIVASDARHNRQIANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHL
                     IVDSVQLERDLISHQEKYQRENTMIRITPFETRQSPNISSQLMETFIGVWIDGMSDAD
                     LQQMMQRLVDYIAQEDNYRLILLSRHQNDIPMWLRECITSVNEEYQAKQNADVNVSAL
                     MTPEDQDDIIAVKTIHAEHDVVEALRTLRLVIDMSKEPDLYLQISAISAGIPQINGQQ
                     TDYVSDYDNGRIINTVDELDDALNYYL"
BASE COUNT         2807 a         1337 c         1431 g         2236 t
ORIGIN      
        1 ggattttgac aaattaagta ttttttattt gaaaaaagag ttgtattaaa ttgaatagtg
       61 gcatatatta taatctaatg aatgtaaaga taatacaagg agttattaca tgagcaaaag
      121 acagaaagaa tttcatgaca gcttagcaaa cgaaaaaaca agagtaagac tttataaatc
      181 tggaaaaaat tgggtaaaat ccggtattaa agaaatagaa atgttcaaaa taatgggact
      241 accatttatt agacatagta tagtgagtca agataatcaa agcattagta aaaaaatgac
      301 tggatacgga ctgaaaacga cggcggttat tggtggtgca ttcacggtaa acatgttgca
      361 tgaccagcaa gcttttgcgg cttctgatgc accattaaca tctgaattaa atacacaaag
      421 tgaaacagta ggtaatcaaa actcaacgac aatcgaagca tcaacatcaa cagccgattc
      481 cacaagcgta acgaaaaata gtagttcggt acaaacatca aatagtgaca cagtctcaag
      541 tgaaaagtct gaaaatgtca cttcgacaac taatagtaca agtaatcaac aagaaaaatt
      601 aacatctaca tcagaatcaa catcctcaaa gaatactaca tcaagttctg atactaaatc
      661 tgtagcttca acttcaagta cagaacaaca aactaatata tcaacaaatc aaagcactgc
      721 atcaaatact acttcacaaa gcacagcgcc agcttcaacc catttaaaac aaactagcac
      781 aacgtcaacc agcacagcac ctgtcaaact tcgaactttc agtcgattag ctatgtcaac
      841 ctttgcatca gctgcgacga caaccgcatt aactgctaat acaattacag ttaataaaga
      901 taacttaaaa caatatatga caacttcagg taatgccact tatgaccaaa gtacaggggt
      961 cgtaacgtta acgcaggatg catatagcca aaaaggtgct attacattag gaacacgtat
     1021 tgactctaat aagagttttc atttttctgg aaaagtaaat ttaggtaata aatacgaagg
     1081 taatggaaat ggtggagatg gtatcggctt tgccttttcg ccaggtgtat taggtgaaac
     1141 agggttaaac ggtgccgcag taggtattgg tggcctaagt aacgcatttg gcttcaaatt
     1201 ggatacgtat cacaatacat ctaaaccaaa ttcagctgca aaggcgaatg ctgacccatc
     1261 tagtgttgct ggtggaggtg cgtttggtgc ctttgttaca acagatagta ctggcgttgc
     1321 gacaacgtac acatcaagtt caacagctga taatgctgca aagttaaaag ttcaacctac
     1381 aaacaacacg ttccaaaatt ttgatattac ttataatggt gatacaaagg ttatgactgt
     1441 cacgtatgca ggtcaaacat ggacacgtaa tatttcagat tggattgcaa aaagtggtac
     1501 gaccaacttt tcattatcaa tgacagcctc aacaggtggc gcgacaaatt tacaacaagt
     1561 acaatttgga acatttgaat atacagagtc tgctgttaca caagtgagat acgttgatgt
     1621 aacaacaggt aaagatatta ttccaccaaa aacatattca ggaaatgttg atcaagtcgt
     1681 gacaatcgat aatcaacaat ctgcattgac tgctaaagga tataattaca catctgtcga
     1741 tagttcatat gcatcaactt ataatgatac aaataaaact gtaaaaatga cgaatgctgg
     1801 acaatcagtg acatattact ttactgatgt aaaagcacca actgtaactg taggcaatca
     1861 aaccattgaa gtgggtaaaa caatgaatcc tattgtgttg actacaacgg ataatggtac
     1921 agggactgtg acaaatacag ttacaggatt accaagcgga ttaagttatg atagtgcaac
     1981 gaattcaatc attgggacac caacaaaaat tggtcaatca acagtgacag tagtatctac
     2041 tgaccaagca aataacaaat cgacgacaac ttttacaata aatgttgtgg atacgacagc
     2101 accaacagtg acgccaatag gagataaatc atcagaagtt ttttctccaa tatcaccgat
     2161 taaaattgct acgcaggaca atagtggtaa tgcagtaaca aatacagtca caggattgcc
     2221 gtctggacta acattcgata gtacaaataa taccattagt ggtacaccaa caaacattgg
     2281 tacaagtact ataacaatcg tttctacaga tgcgagcggt aacaaaacga cgacaacttt
     2341 taaatatgaa gtaacaagaa atagtatgag tgattccgta tcaacatcgg gaagtaccca
     2401 acaatcacaa agtgtgtcaa caagtaaagc tgactcacaa agtgcatcaa cgagtacatc
     2461 aggatcgatt gtggtatcta catcagctag tacctcgaaa tcgacaagtg taagcctatc
     2521 tgattctgtg agtgcatcta agtcattaag cacatctgaa agtaatagtg tatcaagctc
     2581 aacaagcaca agtttagtga attcacaaag tgtatcatca agcatgtcag gttcagttag
     2641 taaatcaaca tcattaagcg attctatttc gaactctagc agtactgaaa aatccgaaag
     2701 tctatcaaca agtacatctg attcattgcg tacatcaaca tctttaagtg attcagtaag
     2761 catgagtaca tcaggaagct tgtttaagtc acaaagctta tcaacaagta catccgattc
     2821 ggctagtact tcacaatcgg taagtgatag tacatcaaat tcaattagta cgtcagaatc
     2881 attgagtgag tcagttagta catcagaatc tataagtatt tctaatagca tttcgaattc
     2941 agtgagtgca tcaacaagca aatcggaatc acaaagtaca tcaatatcat taagtacaag
     3001 cgattctaaa tcgatgagta catcagaatc attaagcgat tcaacgagca caagtgattc
     3061 ggtatctgga tcattaagtg tagcagggtc acaaagtgtc tcaacaagca catcagactc
     3121 aatgagcacg tctgaaatga taagcgattc tatgagtaca agtggatcat tagctgcatc
     3181 agacagtaaa tcaatgtctg taagtagttc gatgagcact tctcagtcag ttagtacatc
     3241 agaatcatta agtgattcga caagcacatc aacatcggct agtgaagtaa tgagcgcaag
     3301 catatcggat tcacaaagta tgtcagaatc tgtaaatgat tcagaaagtg taagtgaatc
     3361 taattctgaa agtgactcta aatcgatgag tggctcaaca agtgtcagtg attctggctc
     3421 attgagcgtc tcaacgtcat taagaaaatc agaaagtgta agcgagtcaa gttcattgag
     3481 tggctcacaa tcgatgagcg attcagtaag cacaagcgat tcgtcatcat taagtgtatc
     3541 gacgtcacta agaagttcgg aaagcgtgag tgaatctgat tcattaagtg attcaaaatc
     3601 gacaagtggt tcgacttcaa caagtacatc tggttcattg agtacatcaa catcattaag
     3661 tggttcagaa agcgtaagcg agtctacctc gctaagtgat tcaatatcaa tgagtgattc
     3721 tactagtaca agtgactccg actcattaag tggatcaata tctttaagtg gttccacaag
     3781 tcttagcact tcggattcat taagtgattc aaaatcattg agtagctcgc aaagtatgag
     3841 tggatcagaa tcaacgtcaa caagtgtgag cgattcgcag tcaagctcaa caagtaatag
     3901 tcaatttgac tctatgagca tcagtgcatc agaaagcgac tcaatgtcta caagtgattc
     3961 gtctagcatc agtggatcaa attcaacgag tacatcactt tcaacatctg actcaatgag
     4021 cggaagcgta tcagtttcaa catcgacaag tttaagtgac tcaatatcag gttcaacaag
     4081 tttaagtgac tcgagctcaa caagcacatc tacatcatta agtgattcaa tgtcacaaag
     4141 ccagtcaaca agtacaagtg catctggttc cttaagtaca tcgatatcaa catcaatgtc
     4201 aatgagtgct agtacatcgt catcacaaag cacatcggtg tcgacatcat tatcaacatc
     4261 agacagtatc agtgattcta cttcaataag tatcagtggt tcacaaagta cagtagaatc
     4321 agaatctaca agtgattcaa cttctatcag tgactcagaa tcattgagta catcagattc
     4381 agactcgaca tcgacaagta catcggactc aacaagtggt tcaacttcaa caagcatatc
     4441 tgaatcatta agtacgtctg gttcaggttc aacgagcgta tctgactcaa catcaatgag
     4501 tgaatccgat tcaacaagtg tttcaatgtc acaaagtatg tccggttcaa cgtacaactc
     4561 gacttcagtg agcgactcag aatcagtgtc aacaagcaca tcaacgtcat tgagcacatc
     4621 cgattcgaca agcacatccg aatcgctgag tacatctatg tctggttcac aaagcatttc
     4681 tgactcaaca tcaacaagta tgttcggctc aacaagtaca tctgaatcta actcaatgca
     4741 tccgtcagac tcaatgagta tgcatcatac tcacagcacg agcacatctc gcttatcaag
     4801 tgaagcaaca acgagcacga gtgaatctca gtctacatta agtgcaacat ctgaagtgac
     4861 taaacataat ggcacgcctg cacaaagtga aaaaagattg ccagatacag gtgactcaat
     4921 aaaacaaaat ggattactag gtggcgttat gacattatta gttggtttag gtttaatgaa
     4981 gagaaagaaa aagaaagatg aaaatgatca agatgattct caagcataaa ttgaatttat
     5041 agctggctaa aattaaaaag actgaggcac caatcactag aaaaatcgat ataggatttt
     5101 aataattagt gatgaaccct tagtcttttt aatgtttttg atataaaaga ggtgcaacat
     5161 gttaaaactt ttacaacaat acgaatataa aattatatat aaacgtatgc tatacacatg
     5221 ttttatatta tttatttata tattaggtac aaacatttcc atcgtttcct ataacgatat
     5281 gcaagtaaaa catgagtcat tttttaaaat agctatttct aatatgggtg gagacgttaa
     5341 tactttaaac attttcactt taggattagg tccgtggtta acatcaatga ttatcttgat
     5401 gcttatttct tatcggaata tggataaata catgaaacaa acaagtcttg agaagcatta
     5461 taaagagcgc atcttaacat taattttaag tgttattcaa agttattttg tgattcatga
     5521 atatgtttcg aaagaacgtg ttcatcaaga caatatttac ttaacaatat tgattttggt
     5581 tactggaacg atgttattag tttggttagc tgacaaaaat agtcgttacg gcatcgcagg
     5641 accaatgccg attgtaatgg ttagtattat taaatcaatg atgcatcaaa aaatggaata
     5701 tatagatgca agtcatattg tgattgcgtt gttaatcatc cttgtgataa tcacattgtt
     5761 tatcttatta tttattgaat tagtagaagt gagaatacca tatatcgatt taatgaacgt
     5821 ttccgcaaca aatatgaaat cttatttatc ttggaaagtt aaccctgcag gcagtattac
     5881 tttaatgatg agcatttcag cttttgtttt cttaaaaagt ggcattcatt ttattttatc
     5941 tatgtttaat aaagacgttt cagatgaaat gccaatgatg acattcgata gtccaattgg
     6001 tatttcagta tatttagtga ttcaaatgtt attgggttat tttttatcga gatttttaat
     6061 aaatacaaaa caaaaatcaa aagacttctt aaagagtggc aattattttt caggagttaa
     6121 acctggtaag gatacagaac gttatttaaa ttatcaagca cgacgcgtat gttggtttgg
     6181 gtcggcatta gttacagtca ttattggtat accactttat ttcacattgt ttgtaccgca
     6241 tttatctact gaaatttatt tctcagtaca actgattgta ttagtttata tcagtattaa
     6301 tattgcagaa acaattcgta catatttata ttttgataaa tataagccat ttttaaacca
     6361 gtattggtaa ggaggtaatt atgaaatact ttattccagc ttggtacgat gaccaacgat
     6421 ggtggcaaga cacgactgtg ccgtattatc aactacaaaa taagacggaa tttgacgata
     6481 tgattagttt aatgggaatg caccttgaaa atgacttaga ttatcgtctg attgttctca
     6541 atcatgcacc aaatttaaga acatttttac atcgatatga cttatatgag acaaagtatt
     6601 ggtctgtgtt tgatgaaatt caaggattca gtcaccatgc gccacaagcg attaattatc
     6661 accacttaaa atggccggat gacgtagaat tcgtgtacac gccgtattta ttaaaatgtg
     6721 tgacgagtga acagaactat acaaatattt attttagtca agaagggtat tcaatttggt
     6781 ttgaagaatt tgaaagagat cagttacaac ggcgttatat ttttgatgac agaggttatt
     6841 tatcagcgat acgttatttt gatgatcatg gagaggcttc ttaccaagaa tatttaacga
     6901 ttaatggaga ttgtgtgctt tacgaaaact ttaaaaatgg acgagtcact gtttcaaaaa
     6961 gatatcaaca tcattatcaa caaacagaat ataacaatat ggttcaacta attgaagaaa
     7021 aatttcaagc aatgattgca caacaaatac atgaagatga tcatgtgatt gtggcttcag
     7081 atgctaggca caatcgacaa atagccaatc atattccagc gaaatcatta agttattcat
     7141 tttttaaaaa tagaaatgaa actgtgtcag atgaggaata tcaatctatc gtaaagaatg
     7201 cccatttaat tgttgatagt gtgcaactag aacgtgattt aattagtcat caagagaagt
     7261 atcagcgaga gaatacaatg attcgaatca caccatttga aacgagacaa tcacctaata
     7321 taagtagtca attgatggaa acatttatag gtgtatggat agatggtatg agtgacgctg
     7381 atttgcaaca aatgatgcaa cgacttgtgg attatatcgc acaagaagat aattaccgtt
     7441 taattttatt atcacgtcat caaaatgaca taccaatgtg gcttcgtgaa tgtattacgt
     7501 cggtaaatga ggaataccaa gctaaacaga atgcggatgt taatgtttca gcattaatga
     7561 cacctgaaga tcaagatgac attattgctg ttaagacgat acatgctgaa catgatgttg
     7621 tagaagcatt gcggacgttg cgacttgtga tagatatgtc aaaagaacct gacttgtatt
     7681 tacaaattag tgcaattagc gctgggattc cacaaattaa tggtcaacaa acagattacg
     7741 tctctgatta tgacaatggc cgtattataa atacagttga tgaattagat gatgcgttaa
     7801 attattattt a
//
LOCUS       DAKPJH010000114         7766 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.114, whole genome shotgun sequence.
ACCESSION   DAKPJH010000114 DAKPJH010000000
VERSION     DAKPJH010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7766
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.114"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            95..250
                     /locus_tag="OY092_002241"
                     /pseudo
     CDS             95..250
                     /locus_tag="OY092_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499365.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            258..779
                     /locus_tag="OY092_002242"
     CDS             258..779
                     /locus_tag="OY092_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077164.1"
                     /translation="MINIISAIGSIGTFIMALFYFVSVSVQLYQMKISFLPALGFNQI
                     LLEREGDQLNIMNSATEEHHHKDYIKLYNLGGGAAKKIAIEVLLGNDKVIQKKYVNIL
                     PSKEGYMLPINKNVYEELERTIENNGYEADLNVRMTYYHNVSRKQQEVILKGQIDRFN
                     TYNNKEIYDLQFI"
     gene            918..1448
                     /locus_tag="OY092_002243"
     CDS             918..1448
                     /locus_tag="OY092_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCX1077165.1"
                     /translation="MQIRQIHQHDFAQVDQLIRTAFENSEHGYGNESELVDQIRLSDT
                     YDNNLEIVAVLQNEVVGHGLLSEVYLDNGAQREIGLVLAPVSVDIHHQNKGIGKRLIQ
                     ALEREAILKGYNFISVLGWPTYYANLGYQRASMYDIYPPYDGIPDEAFLIKELKVNSL
                     AGKTGTINYTSAFEKI"
     gene            1711..4524
                     /gene="clfA"
                     /locus_tag="OY092_002244"
     CDS             1711..4524
                     /gene="clfA"
                     /locus_tag="OY092_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfA"
                     /protein_id="HCX1077166.1"
                     /translation="MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSV
                     TQSDSASNESKSNDSSSVSAAPKTVDTNVSDTKTTSNTNSGETSVAQNPAQQETTQSA
                     STNATTEETPATGEATTTATNQANTPATTQSSNTNAEELVNQTNNETTSNDTNTVSSV
                     NSPQNSTNAENVSTTQDTSTEATPSNNESAPQSTDASNKDVVNQAVNTSAPRMRAFSL
                     AAVAADAPAAGTDITNQLTDVKVTIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFK
                     ITVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVDNKENVTANIT
                     MPAYIDPENVTKTGNVTLTTGIGTNTASKTVLIDYEKYGQFHNLSIKGTIDQIDKTNN
                     TYRQTIYVNPSGDNVVLPALTGNLIPNTKSNALIDAKNTDIKVYRVDNANDLSESYYV
                     NPSDFEDVTNQVRISFPNANQYKVEFPTDDDQITTPYIVVVNGHIDPASTGDLALRST
                     FYGYDSNFIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPG
                     SDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSA
                     SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSNSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSD
                     SDSDSESDSDSDSGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLI
                     WGLLASLGSLLLFRRKKENKDKK"
     gene            4745..6253
                     /gene="vwb"
                     /locus_tag="OY092_002245"
     CDS             4745..6253
                     /gene="vwb"
                     /locus_tag="OY092_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000791704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor binding protein Vwb"
                     /protein_id="HCX1077167.1"
                     /translation="MKNKLLVLSLGALCVSQIWESNHASAVVSGEKNPYVSKALSIKG
                     QKTNSWNLGQYKDSLRTVMCTSEINKNDGYDEPEYKEAMDTYRKKLFAELDALNKFLD
                     EERKIESSKKNNNQVANGVLGLTHQRYLAIHEAIKENKNEFERKTQDIESRNPDLKKF
                     DRDKDYEVRVKLNELENKVLMLGHAFPNKHEARENLYNKLDLIVGRSDDEREERHPQN
                     DRLSKERVEDLESIIDEFFVEINENRPLNIPALIESNEENIVMAKKLKADTEEAKANT
                     SKRSKRSLNTQNHKSKINEVTEEQKANYEKKFKEIKERFLAKQKNKNNTPVVSLEYDE
                     DDNENDKKLVVSEPSKKPTTPPTYTETTTQVPMPTVERQTQQQIIYNAPKQLAGLNGE
                     SHDFTTTHQSPTTSNHTHNHLIEFEETSALPGRKSGSLVGISQIDSSHLTEREKRVIK
                     REHVREAQKLVDNYKDTHSYKDRLNAQQKVNTLSEGHQKRFNKQINKVYNGK"
     gene            6606..7628
                     /gene="emp"
                     /locus_tag="OY092_002246"
     CDS             6606..7628
                     /gene="emp"
                     /locus_tag="OY092_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular matrix protein-binding adhesin
                     Emp"
                     /protein_id="HCX1077168.1"
                     /translation="MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGIN
                     KIIPAYDEFKSAPKVNVSNLTDNKNFVVSEGKLNKISDPSAASKIVDKNFVVPESKLG
                     NIVPEYKEINNRVNVATNNPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKK
                     VITSYKSTHVHKHVNHAKDSINKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKF
                     VTPGHASIKINHFCVVPQINSFKVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYD
                     YKYYYSYKVVKGVKKYFSFSQSNGFKTGKPALNIKNVNYQYAVPSYSPTHVVPEFKGI
                     LPAPRV"
BASE COUNT         2979 a         1181 c         1399 g         2207 t
ORIGIN      
        1 taatttggaa aatactggtc aaagatggaa gctctcaaaa gcgttattgt attctttagt
       61 caatgcaaat agattgccgt aataataatc gtacttgatg gttaaaaaat tacttaaggc
      121 tttaaagcaa aactttttat atgagtagtc gaatataacg tttaaaatga ttgtttttgg
      181 atataaacga ttaagtaaaa tgctttttca gtttgtaatt aatcatataa atttcttatg
      241 ggaaggttga tatcttaatg attaatatta tttcagctat aggatctatt gggacattta
      301 ttatggcttt attttatttt gtatcagttt cagttcaact ttatcaaatg aaaattagct
      361 ttctgccagc tttaggtttt aaccaaattt tattagaaag ggagggtgat caacttaata
      421 taatgaattc ggcaacagaa gagcatcatc ataaagatta tattaaacta tataatttag
      481 gtggcggtgc tgctaaaaaa attgcaatag aggttttatt gggtaatgat aaagtcattc
      541 agaaaaaata cgtgaatatt ttacctagta aagaagggta catgttacca attaataaaa
      601 atgtgtacga agaattagaa agaacgattg agaacaatgg ttatgaagct gatttgaatg
      661 tacgtatgac ttattatcat aatgtaagtc gcaaacaaca ggaagttata ttaaaaggtc
      721 aaatcgaccg ttttaatact tataataata aagaaattta tgatttgcag tttatctaaa
      781 aattgattta agagggtagt tgtttattgc gaaaaatatc attcaatttt aatgaaataa
      841 tggcgtcatt actataaaat attactttat gttgtaaagc atttttctat aagatagaac
      901 taaaaggagg ggcaaagatg caaattagac aaatacatca acatgacttt gctcaagttg
      961 accagttaat tagaacggca tttgaaaata gtgaacatgg ttatggtaat gaatcagagc
     1021 tagtagacca aattcgtcta agtgatacgt atgacaataa cttagaaata gtagctgttc
     1081 ttcaaaacga agttgtaggg cacggtttac taagtgaagt ttatcttgat aacggagcac
     1141 aacgggaaat tggattagtg ttagcacctg tatctgttga tattcatcat caaaataaag
     1201 gtatagggaa gcgattgatt caagcattag aacgagaagc aatattaaaa ggatataatt
     1261 ttatcagtgt attaggatgg ccgacgtatt atgccaatct aggatatcaa cgcgcaagta
     1321 tgtacgacat ttatccacca tatgatggta taccagacga agcgttttta attaaagaat
     1381 taaaagtgaa cagtttagcg ggaaaaacag gtaccataaa ttacacatct gcttttgaaa
     1441 aaatatgatt tcaagatagg attacattag gcagagttca tattaataat acaaattgtt
     1501 cgcaatgaaa tcgcacgttg tcgtttgcaa tttataaaat agcaataaat aaaatgtttg
     1561 ttaggaaagt attattgtgg ataataaaaa atcgatacaa attaattgct ataatgcaat
     1621 ttcagtgtat aattgcatta atggagatta aatatatctt taaagggtat acagttaata
     1681 taaaatgact ttttaaaaag agggaataaa atgaatatga agaaaaaaga aaaacacgca
     1741 attcggaaaa aatcgattgg cgtggcttca gtgcttgtag gtacgttaat cggttttgga
     1801 ctactcagca gtaaagaagc agatgcaagt gaaaatagtg ttacgcaatc cgatagcgca
     1861 agtaacgaaa gcaaaagtaa tgattcaagt agcgttagtg ctgcacctaa aacagtcgac
     1921 acaaacgtga gtgatactaa aacaacgtca aacactaata gtggcgaaac aagtgtggcg
     1981 caaaatccgg cacaacagga aacgacacaa tcagcatcaa caaatgcaac tacggaagaa
     2041 actccggcaa ctggtgaagc tactactacg gcaacgaatc aagctaatac accggcaaca
     2101 actcaatcaa gcaatacaaa tgcggaggaa ttagtgaatc aaacaaataa tgaaacgact
     2161 tctaatgata ctaatacagt atcatctgta aattcacctc aaaattctac aaatgcggaa
     2221 aatgtttcaa caacgcaaga tacttcaact gaagcaacac cttcaaacaa tgaatcagct
     2281 ccacagagta cagatgcaag taataaagat gtagttaatc aagcggttaa tacaagtgcg
     2341 cctagaatga gagcatttag tttagcggca gtagctgcag atgcaccggc tgctggcaca
     2401 gatattacga atcagttgac agatgtgaaa gttactattg actctggtac gactgtgtat
     2461 ccgcaccaag caggttatgt caaactgaat tatggttttt cagtccctaa ttctgctgtt
     2521 aaaggtgaca cattcaaaat aactgtacct aaagaattaa acttaaatgg tgtaacttca
     2581 actgctaagg tgccaccaat tatggccgga gatcaagtat tggcaaatgg tgtaatcgat
     2641 agtgatggta atgttattta tacatttaca gactatgttg ataataaaga aaatgtaaca
     2701 gctaatatta ctatgccagc ttatattgac cctgaaaatg ttacaaagac aggtaatgtg
     2761 acattgacaa ctggcatagg aaccaatact gctagtaaga cagtattaat cgactatgag
     2821 aaatatggac aattccataa tttatcaatt aaaggtacga ttgatcaaat cgataaaaca
     2881 aataatacgt atcgccaaac aatttatgtc aatccaagcg gagataacgt tgtgttacct
     2941 gccttaacag gtaatttaat tcctaataca aagagtaatg cgttaataga tgcaaaaaac
     3001 actgatatta aagtttatag agtcgataat gctaatgatt tatctgaaag ttattatgtg
     3061 aatcctagcg attttgaaga tgtaactaat caagttagaa tttcatttcc aaatgctaat
     3121 caatacaaag tagaatttcc tacggacgat gaccaaatta caacaccgta tattgtagtt
     3181 gttaatggcc atattgatcc tgctagtaca ggtgatttag cactacgttc gacattttat
     3241 ggttatgatt ctaattttat atggagatct atgtcatggg acaacgaagt agcatttaat
     3301 aacggatcag gctctggtga cggtatcgat aaaccagttg ttcctgaaca acctgatgag
     3361 cctggtgaaa ttgaaccaat tccagaggat tcagattctg acccaggttc agattctggc
     3421 agcgattcta attcagatag cggttcagat tcgggtagtg attctacatc agatagtggt
     3481 tcagattcag caagcgattc agattcagca agtgattcag attcagcaag tgattcagac
     3541 tcagcaagtg attcagattc agcaagtgat tcagattcag caagtgattc agactcagca
     3601 agtgattcag attcagcaag tgattcagac tcagcaagtg attcagattc agcgagcgat
     3661 tcagattcag cgagtgattc agattcagac agcgattcag actcagacag tgactcagat
     3721 tccgatagtg actcagactc agatagcgac tcagattccg atagtgactc cgactcagac
     3781 agcgattcag attcagatag tgattcagat tcagatagcg attcggattc agatagtgac
     3841 tcagattcag atagcgactc agattcagat agcgattcag attccgacag tgactcagat
     3901 tccgacagcg attcagattc cgacagtgac tcagactcag acagtgattc ggattcagat
     3961 agcgattcag actcagacag tgactcggat tcagatagcg attcagactc agacagtgac
     4021 tcggattcag atagcgattc caactcagac agtgattcag actcagacag cgattcagat
     4081 tccgacagtg actcagactc agacagcgat tccgactcag acagtgactc ggattcagat
     4141 agcgattctg actcagatag tgactccgac tcagacagcg actcagattc agatagcgat
     4201 tcagattccg acagtgactc agattcggat agcgattcag aatcagatag tgactccgac
     4261 tcagacagcg actcagattc agatagcgat tcagaatcag atagtgactc cgactcaggt
     4321 tctaacaata atgtagtgcc gcctaattca cctaaaaatg gtactaatgc ttctaataaa
     4381 aatgaggcta aagatagtaa agagccatta ccagatacag gttctgaaga tgaagcgaat
     4441 acgtcactaa tttggggatt attagcatca ttaggttcat tactactttt cagaagaaaa
     4501 aaagaaaata aagataagaa ataagtaata atgatattaa attaataata tgattcatga
     4561 agaagccacc ttaaaaggtg gcttttttac ttggattttc caaatatatt gtttgaatat
     4621 aattaataat taattcatca acagttaatt attttaaaaa ggtagatgtt atataatttg
     4681 gcttggcgaa aaaatagggt gtaaggtagg ttgttaatta gggaaaatta aggagaaaat
     4741 acagttgaaa aataaattgc tagttttatc attgggagca ttatgtgtat cacaaatttg
     4801 ggaaagtaat catgcgagtg cagtggtttc tggggagaag aatccatatg tatcaaaagc
     4861 tttatcaatt aaaggtcaaa agacaaattc atggaattta ggtcaatata aagatagtct
     4921 tcgaacagtt atgtgcacat cagaaattaa taaaaatgat ggatatgatg aacctgaata
     4981 taaagaggcg atggatactt accgaaaaaa attatttgct gaattagatg cgcttaacaa
     5041 gtttttagat gaagagagaa aaatagaaag tagtaaaaaa aataacaacc aagttgcaaa
     5101 tggtgtattg ggcttaacac atcaaaggta tttagctatt catgaagcaa taaaggaaaa
     5161 taaaaatgag tttgaaagaa agacacaaga tatcgaaagt agaaatcctg atttgaaaaa
     5221 atttgataga gataaagatt acgaagttag agtaaaatta aatgaactag aaaataaagt
     5281 attaatgctt ggacacgctt ttccaaataa acatgaagca agagagaatc tttataataa
     5341 attagatttg attgttggcc gtagtgatga tgagagagaa gaaaggcatc ctcaaaatga
     5401 taggttatct aaagaacgag ttgaagattt agaatcaatt attgatgaat tttttgttga
     5461 aatcaatgaa aataggccgt tgaatatacc ggcgttaatt gaaagtaatg aagaaaatat
     5521 agtaatggca aaaaaactaa aagcagatac agaagaagct aaagcgaata catctaaaag
     5581 aagtaaaaga agtttaaata ctcaaaatca caaatctaaa ataaacgaag taactgaaga
     5641 acaaaaagct aattatgaaa agaaatttaa agaaataaaa gaacgatttt tagctaaaca
     5701 aaaaaataaa aataacacac cagttgtatc gttagaatat gacgaagacg acaacgaaaa
     5761 cgacaagaaa cttgtggttt ctgagccatc aaagaaacca acaacaccgc ctacatatac
     5821 tgaaacaacg acacaggtac ctatgcctac agttgagcgt caaactcagc aacaaattat
     5881 ttataatgca ccaaaacaat tggctggatt aaatggtgaa agtcatgatt tcacaacaac
     5941 gcatcaatca ccaacaactt caaatcatac gcataatcat cttattgaat ttgaagaaac
     6001 gtctgcttta cctggtagaa aatcaggatc actggttggt ataagtcaaa ttgattcttc
     6061 tcatctaact gaacgtgaga agcgtgtaat taagcgtgaa cacgttagag aagctcaaaa
     6121 gttagttgat aattataaag atacacatag ttataaagac cgattaaatg cacaacaaaa
     6181 agtaaatact ttaagtgaag gtcatcaaaa acgttttaat aaacaaatca ataaagtata
     6241 caatggcaaa taatattaat gcatggctgc aaagcaaata atgagtttgt cgtaaaaatc
     6301 acaacatttt aaactagcaa taaataatat caaagtcatc aattcaatga tgcaatctag
     6361 tatagtccac attctaaaca ggtgtggact attacttttt tcactttata ttacgaaaaa
     6421 attattatgc ttaactatca atatcaataa ttaattttaa gctgaaaaac aataaaaatg
     6481 ttaagacaac gtttacttca agttaattat tatactgaaa attctggtat ataatgctgt
     6541 tagtgaatat aacaggaaaa ttaaattggt tataatattg agtctatata aaggagaaat
     6601 aacagatgaa aaagaaatta ttagttttaa ctatgagcac gctatttgct acacaaatta
     6661 tgaattcaaa tcacgctaaa gcatcagtga cagagagtgt tgacaaaaaa tttgtagttc
     6721 cagaatcagg tattaataaa attattccag cttacgatga atttaagagt gcaccaaaag
     6781 taaatgttag taatttaact gacaataaaa attttgtagt ttctgaaggc aaattgaata
     6841 agatttcaga tccttcagca gcaagtaaaa ttgtagataa aaactttgtc gtaccagaat
     6901 caaagttagg aaacattgtg ccagagtaca aagaaatcaa taatcgcgtg aatgtagcaa
     6961 caaacaatcc agcttcacaa caagttgata agcattttgt tgctaaaggc ccagaagtaa
     7021 atagatttat tacgcaaaac aaagtaaacc accacttcat tactacgcaa acccactaca
     7081 agaaagttat tacttcatac aaatcaacac atgtacataa acatgtaaat catgcaaagg
     7141 attctattaa taaacacttt attgttaaac catcagaatc gcctagatat acacatccat
     7201 ctcaatcttt aattatcaag catcattttg cagttcctgg atatcacgcg cataaatttg
     7261 ttacaccagg gcatgctagc attaaaatta atcacttttg tgttgtgcca caaataaata
     7321 gtttcaaggt aattccacca tatggtcaca attctcaccg tatgcatgta ccaagtttcc
     7381 aaaataacac aacagcaaca catcaaaatg ctaaagtaaa taaagcatat gactataaat
     7441 actactattc ttataaagta gttaaaggtg tgaaaaaata tttctcattt tcacaatcta
     7501 atggttttaa aactggtaaa ccagcattaa atatcaaaaa tgtaaattat caatatgctg
     7561 ttccaagtta tagccctaca cacgttgttc ctgaatttaa gggcatttta ccagcaccac
     7621 gagtataaaa attggcacta agtttacgag atatgataaa tacctattat tttaaatata
     7681 gtctgcaatc tatgaggttg taggctatgt tttttgcaat ttagcaatca acacccatca
     7741 acaaattata ccgtttttct actttc
//
LOCUS       DAKPJH010000115         7658 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.115, whole genome shotgun sequence.
ACCESSION   DAKPJH010000115 DAKPJH010000000
VERSION     DAKPJH010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7658
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.115"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            17..1474
                     /locus_tag="OY092_002247"
     CDS             17..1474
                     /locus_tag="OY092_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500488.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HCX1077169.1"
                     /translation="MKCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELR
                     VGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKDNNLKLKIVNMSFDSLLGALKTG
                     KIDIIISGMTSTPERKKQVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKG
                     TEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISN
                     VKFNEEEKDTVIAVPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGFISK
                     YGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML
                     VQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGITAVDKGQMEAARSL
                     GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISF
                     DPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD"
     gene            1467..2189
                     /locus_tag="OY092_002248"
     CDS             1467..2189
                     /locus_tag="OY092_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HCX1077170.1"
                     /translation="MIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLL
                     RCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAP
                     KLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILF
                     DEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESG
                     TPVEIFEQPQHERTQNFLARVL"
     gene            2339..3466
                     /gene="queG"
                     /locus_tag="OY092_002249"
     CDS             2339..3466
                     /gene="queG"
                     /locus_tag="OY092_002249"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HCX1077171.1"
                     /translation="MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANG
                     YASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWG
                     QDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
                     PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFL
                     TQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLR
                     MSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRAT
                     AYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE"
     gene            3471..3941
                     /gene="trmL"
                     /locus_tag="OY092_002250"
     CDS             3471..3941
                     /gene="trmL"
                     /locus_tag="OY092_002250"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HCX1077172.1"
                     /translation="MTNHIVLYQPEIPANTGNIARTCAGTNTHLHLIKPLGFRTDDKM
                     LKRAGLDYWEFVNITYHDSIEAFFEATNGEYYLLTKFGKKTYSDFDFSNHDKDFYFIF
                     GKETTGLPDWVKEKYQDTALRIPMSEHIRSLNLSNTAALLIYEALRQQDFPGLN"
     gene            4100..4699
                     /locus_tag="OY092_002251"
     CDS             4100..4699
                     /locus_tag="OY092_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HCX1077173.1"
                     /translation="MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAP
                     VLDELKKNVEKHAVDFSQINILDYDDKKSYFEALGVPAGQVYPIAYEKDAIELIADKI
                     KTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
                     TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA"
     gene            4724..4876
                     /locus_tag="OY092_002252"
     CDS             4724..4876
                     /locus_tag="OY092_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077174.1"
                     /translation="MSKDKDPKLNYHEEENSMVTDFEDLKELSKEMEQISDQNDQEKN
                     SEEDSQ"
     gene            5711..6106
                     /locus_tag="OY092_002253"
     CDS             5711..6106
                     /locus_tag="OY092_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077175.1"
                     /translation="MLGKYWIQLLIATVIISLISIKAFPLAIGALYLPVIFKVIKLQL
                     NLSKGLIDDVNAQTFIKSNQSGIVISVICCLLITGILYYTLDGFYASLTGVLGTLVAL
                     NPYTTIVSAVLYILTAIATVEATKTKYRN"
     gene            6302..>7658
                     /gene="fumC"
                     /locus_tag="OY092_002254"
     CDS             6302..>7658
                     /gene="fumC"
                     /locus_tag="OY092_002254"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000116229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HCX1077176.1"
                     /translation="MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVV
                     YGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSN
                     MNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEP
                     ALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKK
                     HILNLAIGGTAVGTGINAHPEFGDKVAQYISENTGYPFVSSENKFHALTAHDEVVQLH
                     GTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMV
                     AVQVMGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPI
                     EENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEA
                     WI"
BASE COUNT         2760 a         1067 c         1464 g         2367 t
ORIGIN      
        1 agggagggct gtataaatga agtgtttaat taggtttata ttagtattag ggttgttaat
       61 tagcagtgct atggtgtata tcaatcccac agcacatgct gaacaagatc aaacatggga
      121 gaagattaaa gaacgcggtg aacttagagt gggtctttct gcagattatg caccaatgga
      181 atttgagcat acagttaatg gtaagactga gtatgcaggt gtagatattg atttagctaa
      241 aaaaattgcg aaagataata atttaaaatt aaaaatcgtc aatatgtcat ttgatagttt
      301 gttaggagct cttaaaactg gaaaaattga tattattatt tccggaatga cttcaacgcc
      361 tgaacgtaag aagcaagttg atttttcaga ttcatatatg atgactaaaa atatcatgct
      421 tgtaaagaaa gataaagtta atgaatataa agatatcaaa gactttaata ataaaaaagt
      481 aggggcacaa aagggaactg aacaagaaaa aatcgctcaa accgaaattg aaaatgcatc
      541 tattacttca ttaagccgtt taccagacgt tatattagct ctgaaaagtg gaaaggttga
      601 aggtgctgta gttgaaaaac ctgtagcaga agcatattta aaacaaaatc ctaaattagg
      661 aatttccaat gtgaaattta atgaagaaga aaaagataca gtgatagcag tgccaaaaga
      721 ttcaccaaaa ttattgtcac aaattaataa aacgattaaa gaggttaaag ataaaggatt
      781 aatcgataaa tatatgacta atgctgcaaa tgcgatgaat gatgacagtg gttttatttc
      841 taagtatggt agttttttct tgaaaggaat taagattaca atattaattt cacttatcgg
      901 tgttgcatta ggttctattt taggtgcatt cgttgcgtta atgaaattaa gtaaaataaa
      961 aattatttca tggattgctt ctatctatat cgaaatatta agaggaacac caatgttagt
     1021 tcaagtattt atcgtattct ttggtataac tgctgcatta ggactagaca tttcagctct
     1081 tgtttgtgga acaattgcat tagttattaa ttcttcagct tacattgctg aaattattcg
     1141 tgcaggtata actgctgttg ataaaggcca aatggaagcc gcacgtagtc taggtttgaa
     1201 ttatagacaa acgatgaaaa gtgtaattat gccacaagca attaaaaata ttttaccagc
     1261 tttaggtaat gaatttgtca ctttaattaa agaatcatct attgtgtcaa caattggagt
     1321 tggcgaaatt atgtttaatg cacaagtggt tcaaggtatt tcatttgacc cattcacacc
     1381 attactagtg gcagcagcat tatactttgt cttaacattt gtacttacac gcattatgaa
     1441 catgattgaa gggagattga atgccagtga ttaaaataaa caatcttaat aaagtttttg
     1501 gagataatga agttttaaaa gatatcaatc ttgaaatcaa tcaaggggaa gtagtagcaa
     1561 taataggtcc atctggtagt ggtaaaagta cattgttaag atgtatgaat ttattagaag
     1621 tacccactaa aggtcaagtg atttttgaag gcaatgactt aacggaaaaa gggacacaag
     1681 tagataaact acgacaaaaa atgggtatgg tatttcaaaa cttcaaccta tttccacata
     1741 aaaaagttgt cgataatatt attttagctc ctaaattatt aaagaaagat aataacgatg
     1801 aattgcataa ggaagcattg tcgttattag ataaagtggg attaaaagaa aaagcagatg
     1861 tatatccgaa tcaattatca ggtggtcaaa aacaaagggt agcaattgca agagctttag
     1921 caatgcatcc agatgttatt ttattcgatg aaccaacttc agcattagat cctgaggtgg
     1981 ttggtgatgt attaaaagta atgaaagacc tagccaaaga aggtatgacc atggtggttg
     2041 tgacacatga aatgggattt gccaaagatg taagtgacaa agttatattt atggcagatg
     2101 gcgttgtcgt agagtcaggc acaccagtcg aaatatttga acaaccgcaa catgaaagaa
     2161 cacaaaattt cttagcaaga gtattataac aacctaacga agcttgaata tatgatgcgc
     2221 accacaaagt tatatcatat attcaagctt tttattatta aaatcatgga aatgaaacct
     2281 caatatgaat aatggttgtg ttaaaataac atagtattat tttatggggg gcatacgatt
     2341 ggatacaaag cagttaaagc aagatatcat tgactatgca tatacaattg gtatcgacag
     2401 tattggattt actactgccg atccctttga tgaattgaag caaaagctag aagcatatca
     2461 tgcaaatggt tatgcctcag gatttgaaga atctgatatt gctttacgaa cggagcctaa
     2521 attatcttta ccaacagcaa ggtcaatcat agcaattgca gttggttatc ctaacaaact
     2581 gaaaggtgca cctaagagtg ttagaggtga tcgcagaggc ttatttgcta gagcatcgtg
     2641 gggtcaagat tatcatacaa ttatgcgtaa acgattagac atgttagctg catttattga
     2701 atctaaagtt ccagatgttg aaatcaaatc tatggtagat acgggtgtat tatcagatag
     2761 ggcagtagca gaacgtgcag gtttaggatt tgttggtcgt aatggctttg tcatcaatcc
     2821 taaactagga acatggacat acctcggtga aatgttagtc agtatacctt ttgaacctga
     2881 tgatccatta ttagatagct gtggtgattg tacaatttgt gttgatcgtt gtccaacaag
     2941 tgcattagtt ggaaatggcc aattaaatag tcagaaatgc attagttttt taacacaaac
     3001 aaaaggctat atgcctgacc aatatcgtta taaaattggg aatagattat atggttgcga
     3061 tacgtgtcaa caagtttgcc cgaaaaatag aggtattaat accgaacaag atgacatcat
     3121 tttggaacca gaaattttaa agccaagatt ggtacctttg ctacgtatgt ctaataaaga
     3181 attcaaacaa acatatggtc accttgcagg tgcttggcgt ggtaaaaagc cgatacaacg
     3241 aaatgctatt ttagcattag cgcattttaa tgaagtggat gcaattccag aattgaaaaa
     3301 agttgcaaca acagatgaaa gaccgatgat tcgagcaact gcttattggg ccattggtca
     3361 aattcttggg gaagaagcaa gagattttat caatgctaat tatgatcaag aggatgcaga
     3421 agttcagaat gaaatgataa aaggattaga cacaaggaga gaatagtaat atgacaaatc
     3481 atatcgtttt atatcaacca gaaatcccag ctaatactgg taacattgca cgtacgtgtg
     3541 caggtacaaa cacacattta catttaatta aacctcttgg atttagaact gatgataaaa
     3601 tgttaaaaag agccggttta gattattggg aatttgtgaa tattacgtat catgatagta
     3661 ttgaagcatt ttttgaagcc acaaatggcg agtattactt attaacaaaa tttggtaaaa
     3721 agacttatag tgattttgat ttttcaaatc atgacaaaga tttttacttc atttttggaa
     3781 aagagacgac aggattacca gactgggtga aagagaaata tcaagacaca gcattaagaa
     3841 ttcctatgag tgaacatatt cgttcattaa atttatcaaa tactgctgcg ttgttaattt
     3901 atgaagcgtt acgtcaacaa gattttccgg gattgaatta aaatttactc attttcatta
     3961 taaaaatgat gcttaagtgc tatatttaga gtataagcat gttaaagtta aatggtttga
     4021 tatattgaaa gttagggtat aataattatt aatatcgccg tttttatgta aaatgcaaac
     4081 taagaggagt gtagaaatca tggcaatgaa ctttaaagtc tttgacaata gtcaacttgt
     4141 agcagaatat gctgctgata ttattagaaa gcaatttaac aataatccta ctacaattgc
     4201 aggttttcat ttagatacag atcaagcgcc agttctagat gaattaaaga aaaatgttga
     4261 aaaacatgct gttgatttta gccaaataaa tattttagat tatgacgata aaaaatcata
     4321 tttcgaagcg ttaggtgtac cagcaggtca agtttatcca attgcttatg aaaaagatgc
     4381 aatcgaatta atcgctgata agattaaaac taaagaaaat aaagggaaat taacattaca
     4441 agttgtttct atcgatgagc aaggtaagtt aaatgttagt attcgtcaag gactaatgga
     4501 agcaagagaa attttcttag tagtgacagg tgctaataaa cgagatgtag ttgaaaaatt
     4561 atatcaagaa aatggtaaaa caagcttcga accagccgat ttaaaagcac atagaatggt
     4621 aaatgttatt cttgataaag aagcggctgc aggtttacct gaagatgtta aagcttactt
     4681 tacgtcacgc tttgcttaat taaaaatctg tgaggtattg attatgtcta aagacaaaga
     4741 tccaaaatta aattatcatg aagaagaaaa cagtatggta actgattttg aagatttaaa
     4801 agaattaagt aaagaaatgg aacaaatttc cgatcaaaat gatcaagaaa aaaattctga
     4861 agaagacagt cagtaaagta ttataattgt gtaatattca gctatttatc atgtaaacaa
     4921 tgtatagtat agaacatata tcaaatagga ttgattatct tgaatatgaa gttaggtagc
     4981 attttgttac ctagcttttt tataatattc atagaagctg actttccgcc agcttctgtg
     5041 ttggggcacc gccaactcgc acgttattgt aaggtgactt tccgccagct tctgtgtttt
     5101 tggcccgttt ccccaacttg cattgtttgt agaaattgag gattcaattt cactatgttg
     5161 gggccccgcc aacttgcatt gtctgtataa attggaaatc cgatttcgct atgttgtggc
     5221 cccgccaact tgcatgttat tgtaagctga ctttccacca gttcctgtgt tgtggccgtt
     5281 tccccaactt gcatcatctg tagaaataga gaatccaatt tcaatgtgtt tgtggcccgt
     5341 ttccccaact tgcatcatct gtagaaatta gaaatccgat ttcactatgt tgggcctcgc
     5401 caacttgcat gaaatagtaa gctgactttc cgccagcttc tatgtttgtg gcccgcagtc
     5461 aactactgcc aatataactt tgtagagaat agaacattga tttgtgcacc agacatagta
     5521 atatatcaaa agttcaattt taaatattaa aacaccattt aaacggaatt gataattaat
     5581 tactccagac ataattgaaa gaagtcatct atcagtaata tttttaacga aatcattaaa
     5641 ccgcgtttct taatatgcca agattatgat atgctattga agaatgaaat tagaggagat
     5701 ttatatattt atgttaggaa aatactggat tcaattattg atagcaacag ttattataag
     5761 tttaatatca attaaagctt ttccattggc aattggggca ttatatttac ctgttatttt
     5821 caaagtaata aaattacaac tcaatttatc aaaaggatta atcgatgatg ttaatgcgca
     5881 aacattcatt aaaagtaatc aatcaggtat tgtaataagt gttatttgtt gtttattaat
     5941 aacaggaata ttgtattata cacttgatgg gttttatgcg agtttaacag gagttttagg
     6001 tacgcttgtt gctttaaatc catatacgac aattgttagt gctgtattat atatacttac
     6061 agctattgct acggttgaag ctactaaaac aaagtatcgt aattaaactt agttcaacaa
     6121 taactaaata atgatagata acacactaat cgtatgaccg tatcactgta ataaagggtg
     6181 agtacgtgcg attagtgtat ttttatttca aattatgaaa acgttttaat cataaattgc
     6241 tcaattaaat tatttaatga tatactacag ttaaataaac agtgataagg ggagaaattg
     6301 aatgtcagta agaattgaac atgatacttt tggagaaata gaagtacctg cagataaata
     6361 ttggggtgct caaacagaaa gaagtaaacg caatttccca gttggtaaag agcgtatgcc
     6421 aatcgaagta gtttatggtt ttgcacaact aaagcgtgca gcagcattag ctaattttga
     6481 tttaggaaaa ttaagcgagg caaagaaaga tgccattgta tacgcatgtg atcaaatttt
     6541 atcaggtgaa ttagatgaac acttcccact agttgtatgg caaacaggaa gcggtacaca
     6601 aagtaatatg aatgtgaacg aagtagtaag ttatgttgct aatatgtatt taaaagatca
     6661 tcaaagtgat gaaagtatcc acccaaatga tgatgtaaat aaatcacaaa gttcgaatga
     6721 tacattccca actgctatgc acgttgcatt atatcaagag gttgaaacaa aattagaacc
     6781 tgcattaaaa cttttaagaa atactttgaa agaaaaagaa gacaaatttg attcaattat
     6841 taaaattggt cgtacacatt tacaagatgc aacgccgatc aaactaggac aagagattag
     6901 tggctggcgt tatatgcttg accgttgcga aataatgtta tctgaatcta agaagcacat
     6961 tttaaatcta gccattggtg gtacggctgt tggtactggt attaatgcgc atcctgaatt
     7021 tggtgataaa gtggcacagt atatttctga aaatacgggt tatccatttg tatcttctga
     7081 aaataaattc catgcattaa cagcacatga tgaagtagta caactacatg gaacattgaa
     7141 ggcgctagca ggagacttaa tgaaaattgc taatgatgtg agatggttgg cttcagggcc
     7201 acgagctggt ttggcagaaa tttctatccc tgaaaatgaa ccaggttcat caattatgcc
     7261 tggtaaagtt aatcctacac aatgtgaaat gttaacaatg gttgcagtcc aagtaatggg
     7321 taatgataca gttgttggct tcgcaagttc acaaggtaac tttgaattga atgtttataa
     7381 accagttatt atgcataata cactacaatc aatttacctt ttagctgatg gtatggaaac
     7441 atttaataac aattgtgcag tgggcattga accaatcgaa gagaatattg ataattattt
     7501 aaatcaatca ttaatgttag ttactgcatt aaatccacat attggttatg aaaaagctgc
     7561 tcaaattgct aagaaagccc ataaagaagg tttaacttta aaagaatctg caattcaaac
     7621 tggatatgtt acagaagaac aatttgaagc atggatta
//
LOCUS       DAKPJH010000116         7649 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.116, whole genome shotgun sequence.
ACCESSION   DAKPJH010000116 DAKPJH010000000
VERSION     DAKPJH010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7649
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.116"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..928
                     /gene="hlgC"
                     /locus_tag="OY092_002255"
     CDS             <1..928
                     /gene="hlgC"
                     /locus_tag="OY092_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgCB subunit C"
                     /protein_id="HCX1077177.1"
                     /translation="ATTISVSLLAPLANPLLENAKAANDTEDIGKGNDVEIIKRTEDK
                     TSNKWGVTQNIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKNTNHIKSMRWPFQY
                     NIGLKTNDPNVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSIS
                     YTQQNYVSEVEQQNSKSVLWGVKANSFVTASGQKSAFDSDLFVGYKPNSKDPRDYFVP
                     DSELPPLVQSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHAIKRSTHYGNSYLD
                     GHRVHNAFKNRNYTVKYEVNWKTHEIKVKGQN"
     gene            930..1907
                     /gene="hlgB"
                     /locus_tag="OY092_002256"
     CDS             930..1907
                     /gene="hlgB"
                     /locus_tag="OY092_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB/HlgCB subunit
                     B"
                     /protein_id="HCX1077178.1"
                     /translation="MNMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTL
                     YKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKAAGNINSGYERPNPKDYDFSKI
                     YWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG
                     NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNEI
                     FLAGRQSSSYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMD
                     LYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLGTKETENNK"
     gene            complement(1959..2426)
                     /locus_tag="OY092_002257"
     CDS             complement(1959..2426)
                     /locus_tag="OY092_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HCX1077179.1"
                     /translation="MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPAALLIL
                     AFFGIKKYFLGGLLSSLLLLVFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLVLAS
                     VLGSLVSRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR"
     gene            complement(2437..3129)
                     /locus_tag="OY092_002258"
     CDS             complement(2437..3129)
                     /locus_tag="OY092_002258"
                     /EC_number="6.2.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxyhexanoate--CoA ligase"
                     /protein_id="HCX1077180.1"
                     /translation="MYSIKMRSSNQDVHISGAETICEFDKIEQTVRRFYNKGFFHENG
                     QPDFLNIKIQKIMEPIQQIKALQITEDDKANLQHLTQECGVTEQALNQGMTYIKNETV
                     YTGAIILSAISGKRLDSFGQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPY
                     VKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFL
                     ESTPKQVVYETV"
     gene            complement(3140..4255)
                     /locus_tag="OY092_002259"
     CDS             complement(3140..4255)
                     /locus_tag="OY092_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HCX1077181.1"
                     /translation="MMFQEQIDLLQQKGLYRSLKSVGYIDRQYIEVENKRCTNYTSND
                     YLGLGQIAFDKDDFERFMRKYSYHLSSSRLISGSSTAYEEIETMLAGWLGYNACTILN
                     SGYDANLALFNIFKNTNCVVFSDQENHASIIDGIKLSGLEKVIYKHLDIADLEKRLAE
                     YPNQNIQKIIISDSVFSTNGDVVDIGQLVSLKHKYNATLILDVSHSFGIENYSNYQGI
                     DILTSSLSKACGAYGGVILSSNDVKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLIN
                     ADDRRTKLNSLIKYFNQKLKTLNVNYNSSNSPIKFIEFDDIEAAKNIHQTLLKHHVFT
                     SYLRYPTVTKPMLRISLSYFHTEQDVDRLFEILHQED"
     gene            complement(4233..5240)
                     /gene="bioB"
                     /locus_tag="OY092_002260"
     CDS             complement(4233..5240)
                     /gene="bioB"
                     /locus_tag="OY092_002260"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HCX1077182.1"
                     /translation="MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYF
                     GKKVKLNMILNAKSGICPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGT
                     YCIVMSGRGPSDKEVDHISNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYN
                     HNINTSENYHDNVVTTHSYKDRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFAL
                     KEMDADSIPINFLHPIKGTKFGSMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNL
                     RSLQPLALKAANSIFVGDYLITGGQPNQLDYDMINDLGFEIDYDTCENKENKNDVSRA
                     N"
     gene            complement(5242..6600)
                     /gene="bioA"
                     /locus_tag="OY092_002261"
     CDS             complement(5242..6600)
                     /gene="bioA"
                     /locus_tag="OY092_002261"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HCX1077183.1"
                     /translation="MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDT
                     NGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEI
                     TPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNYGYHGDTIGAV
                     SVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIA
                     GFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHED
                     VQPDIMCLGKAITGGYLPLAVTLTSQKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVA
                     LENIRLYEKRKLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKT
                     PLEIEKVERIVRNCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDR
                     KC"
     gene            complement(6578..7264)
                     /gene="bioD"
                     /locus_tag="OY092_002262"
     CDS             complement(6578..7264)
                     /gene="bioD"
                     /locus_tag="OY092_002262"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HCX1077184.1"
                     /translation="MRIFITSTNTDVGKTYVTKHLYHALKTRGHRVCVFKPFQTEERQ
                     DGTFPDLEVFKNECDLSYDITSLYTFKQPVSPHLAFKMADQIFLNKQRVLDKVKVLDK
                     EFDFILIEGAGGIAVPIYEGTDDFYMTKDLINDCADCVISVLPSKLGAISDAIVHQDY
                     VNQNVSASNFLIMNRYTDSYIEKDNQMTIGKLTNKTVYTFEEHATYENFSEAFLKQLI
                     GVKNELHTTT"
     gene            complement(7319..7486)
                     /locus_tag="OY092_002263"
     CDS             complement(7319..7486)
                     /locus_tag="OY092_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077185.1"
                     /translation="MQLLILTDIFYRIAVYICPNSVRSLSHFNSKVKILPKFIVILRS
                     LNSCFLEKHAP"
BASE COUNT         2574 a         1415 c         1075 g         2585 t
ORIGIN      
        1 agctacaact atatctgtaa gcttacttgc ccctcttgcc aatccgttat tagaaaatgc
       61 taaagctgcc aatgatactg aagacatcgg taaaggaaac gatgtagaaa ttatcaaaag
      121 gacagaagat aaaacaagta ataaatgggg agtgactcaa aatatccaat tcgactttgt
      181 gaaggataaa aaatataaca aagatgcttt gatcctaaag atgcaaggat tcattagctc
      241 tcgaacaaca tattataact ataaaaatac aaatcatatt aaatctatgc gttggccctt
      301 ccaatataat attgggttaa aaacaaatga tccaaatgtt tctttaatca attatttacc
      361 gaaaaataaa attgaatcta caaatgtgag ccagacatta ggatacaata tcggcggtaa
      421 tttccaatca gccccatcac tcggtggtaa tggatccttt aactactcta aatcgattag
      481 ctatacacaa caaaattatg tcagtgaagt ggaacaacaa aactcaaaaa gtgttttatg
      541 gggtgtcaaa gcgaattcat tcgtcactgc atcaggtcaa aagtcagcat ttgatagtga
      601 tttattcgta ggatacaaac caaatagcaa agatccaaga gattattttg ttccagacag
      661 cgaattacca cctcttgtgc aaagtggatt taacccttca tttatcgcaa cagtatctca
      721 tgaaaaaggt tcaggcgaca cgagcgaatt tgaaatcact tatggaagaa atatggatgt
      781 cactcatgcc attaaaagat caacacatta tggcaacagt tatttagatg gtcacagagt
      841 ccataatgca tttaaaaata gaaactacac tgtgaaatat gaagtcaatt ggaagacaca
      901 cgaaatcaaa gtgaaaggac agaattgata tgaacatgaa taaattagtc aaatcatccg
      961 ttgctacatc tatggcatta ttattacttt ctggtactgc taatgctgaa ggcaaaatca
     1021 caccagttag cgtcaaaaaa gtagatgata aagttacttt atacaaaact acagctacag
     1081 cagattcaga taaattcaaa atttcacaga ttttaacatt taatttcatc aaagataaaa
     1141 gttatgataa agatacttta gtacttaaag ctgcaggtaa tattaactca ggttatgaaa
     1201 gaccaaaccc taaagactat gacttttcaa aaatatattg gggtgcaaaa tacaatgtgt
     1261 ctatcagttc acaatctaat gattcggtta atgtagtaga ctatgcacct aaaaatcaaa
     1321 atgaagaatt tcaagtgcaa aacactttag gatacacatt tggtggtgac atcagtatct
     1381 ctaatggttt atctggtgga cttaacggaa acactgcttt ttctgaaaca attaactaca
     1441 aacaagaaag ttacagaaca actttaagtc gcaacacaaa ttataaaaat gtcggttggg
     1501 gtgtagaagc acataaaatt atgaataatg gttggggccc ctatggccga gatagcttcc
     1561 atccaacata tggcaatgaa atcttcttag ctggtagaca aagcagttca tatgcaggcc
     1621 aaaacttcat agcgcaacac caaatgccat tattatctag aagtaacttc aatccagaat
     1681 ttttaagcgt actatcacac agacaagatg gcgctaaaaa atctaaaatt acagtaactt
     1741 atcaacgtga aatggattta taccaaattc gttggaatgg gttctactgg gcaggcgcaa
     1801 attataaaaa ctttaaaact agaacattta aatcaacata tgaaattgat tgggaaaatc
     1861 acaaagtgaa attgttaggt acaaaagaaa ctgaaaacaa taaatagcta gtaaaacacg
     1921 gtcgccaaca ataattgtga cgaccgtgtt ttgatttatt atcttagtaa gactgccatt
     1981 ctttttctca atgtgagata taaaggaata gctacaatta aagtgaatat tacgcctgga
     2041 atcgcgttta ataacactac ccacacaggt aaatttaaaa taatagataa tagtagccta
     2101 gataccaaac tgcctaatac acttgctaaa actaatgata gtacatttat tttcaataaa
     2161 taaacaactg caatagctat aactctaaat ataatagaga taatcacatt aattggatta
     2221 aatacaccaa atactagtaa taataggcta gataataatc cacctaaaaa gtacttttta
     2281 attccaaaga aagctaatat caataatgct gccggtgcag ataattgaaa atctaaacct
     2341 ggtataatgg atggtatttt caaaactgcc aaaatggtta aaatcgcagc aatgacacta
     2401 atttgagtaa tatcttttga tgtcatacta aaacccctat accgtttcat aaacaacttg
     2461 cttcggtgtg ctttctaaaa atgatatgta atgatttaaa tcaatacgat cgtccacaaa
     2521 tattattctg cctccatatc tcgtattaac tggtttaata tcaaataatc gatggtaacc
     2581 aattttagca gaggcaaaat aacctgtcgt atacgttaag tcatcggaca cacaaagttc
     2641 tcctttgaca tatggatgcg cattgataca actagcaatt gctaaggcat cagtcactct
     2701 ttcattaaga tcacctttat tatttatatc ttcaaacgaa aaatgcgttg ccctaatccc
     2761 tctttgtcca aatgaatcta aacgtttacc agatatagca gatagaataa tagctcctgt
     2821 ataaaccgtt tcatttttaa tatatgtcat cccttgattt agcgcttgtt cagtgacacc
     2881 acattcttgt gttaaatgtt ggagatttgc tttatcatcc tcagtaattt gtaatgcttt
     2941 tatttgttga atcggttcca tgattttttg tatttttata ttgagaaaat ccggttgccc
     3001 attttcatga aaaaaacctt tattataaaa ccttcgtacc gtctgttcta ttttgtcaaa
     3061 ctcacaaatc gtttcagcac cactaatatg aacatcttga ttgctagaac gcatttttat
     3121 actatacatg acgatcacct caatcttctt gatgcaaaat ttcaaacaac ctatctacat
     3181 cttgttcagt atgaaaatac gacaatgata ttcttaacat tggcttagtc acagttggat
     3241 accttaaata acttgtaaac acatgatgct ttaataatgt ttgatgaatg ttcttagccg
     3301 cttctatgtc atcaaactca ataaacttaa tcggcgagtt tgaactatta taattaacat
     3361 tgagtgtttt taacttttgg ttaaaatatt taatcaaact atttaattta gtgcgtctat
     3421 catcagcatt tattaacttt tcaatatttc tttttataaa atacaaatta taaattggca
     3481 aactacttga gtagatgagt ggtctaccgt gattaattaa catatccttc acatcatttg
     3541 aacttaaaat cacacccccg tatgcaccac atgctttaga taaactagaa gtgagtatat
     3601 ctatgccttg ataattcgag taattctcta ttccaaaact atgtgaaaca tcgagtatca
     3661 gtgttgcgtt atatttatgc tttaatgaga ctaattgacc aatgtccaca acgtcgccat
     3721 tcgttgaaaa tacactatca gatatgatta ttttttgtat attttgatta gggtattccg
     3781 ctaacctttt ttctaaatca gcaatatcta gatgcttata tatcactttt tctaaaccac
     3841 ttaacttaat accgtcaata atactcgcat gattttcttg atctgaaaac acgacacaat
     3901 ttgtattttt gaaaatatta aataacgcca aattagcatc ataaccacta tttaagatag
     3961 tacatgcatt atatccgagc caacctgcta acattgtttc aatctcttca taagctgtcg
     4021 aacttccact aattaatctt gaacttgata agtgataact atacttccgc ataaatcttt
     4081 cgaaatcatc cttatcaaac gctatttgtc ctaatcctaa ataatcatta gatgtatagt
     4141 tcgtacatcg cttattttct acttcaatat actgtctatc tatataccct accgatttaa
     4201 gcgaccgata taaccctttc tgttgtaata aatcaatttg ctcttgaaac atcattcttg
     4261 ttttccttat tttcacaagt gtcataatca atttcaaagc ccaaatcatt aatcatatcg
     4321 tagtctaatt ggttcggttg cccaccagta attagataat caccgacaaa tattgaattc
     4381 gccgctttta atgctaatgg ctgtaacgaa cgtaagttga cctctcttcc tccagcaata
     4441 cgaatttctt tcgtaggatt gattaatcgg aataatgcta cgattcttaa acatttcatt
     4501 ggtgttaaat catccatgct accgaacttt gtacctttaa ttggatgtaa aaaattaatc
     4561 ggaatactgt cggcatccat ttctttcaaa gcaaatgcca tatcaacaat atcttgatta
     4621 gattctccca taccacaaat cacgccagaa catggtgata tattattcgc tttcattagt
     4681 tctatcgtat ctgttctatc tttataacta tgcgttgtca cgacgttatc atggtaattt
     4741 tcacttgtat taatattgtg gttatatctg tctacaccag cagacttaag tttcttagct
     4801 tgttcgtcat tcgttaatcc taaacatgca catattttta gttgcgggtg ttgagattta
     4861 atcgttctta cagtgttact aatatgatca acttctttat cgctcggccc tctaccactc
     4921 ataacaatac aatatgttcc aatatgatta tcatgtgcta cctttgctcc atcgataatt
     4981 tgttcctctg gaattaaagc atatcgctgt ttttgtttaa tatctcgtga ttgtccacag
     5041 tacccacaat tctcaggaca tataccactt ttagcattta aaatcatatt taattttact
     5101 tttttaccga aataatgttt tcttaaaatg tacgcctcat ttaataaatc taaggtatca
     5161 atattagtat cctcataaat tttcaataca gtctcttttg ttaattgttc cccttgtaat
     5221 atgcgtttag ccaaattcat attaacactt cctatctaaa atgttatgta ctgccttttt
     5281 aaaaatacgt accatcgttt tcacttcttt atttgacata cttaacactg gcacaaacgt
     5341 aatgacattt tctaaatttc taatcattag cccattttct ttacaattac gtacaatacg
     5401 ttcaactttt tcaatttcta acggcgtttt actatcttta tctgtaacca attcaactcc
     5461 aaacattaag cctcgtcctc ttacatcacc aacatttcga tgacgcttca gcgcatgtaa
     5521 ctgtttctca agtgttgatg atgtcgtttc aatatgtgac aataacttac gtttttcata
     5581 aagtcttata ttttctaatg caaccgtaca aacgatttga tttccggtgt atgtatgacc
     5641 atggaaaaag gtattcacac catgcgaatc acttaaaaat gcattgtata ttttttgaga
     5701 tgtcaatgta actgcaagtg gtaagtagcc acctgtaatc gccttaccta aacacataat
     5761 atccggttga acatcttcat gattacatgc aaacatcttt ccagttctcc caaaaccaac
     5821 agctacctca tcacaaatta ataagacatc gtattttttg cacaatttct cgacttcttt
     5881 caaaaagcct ttaggatgaa caaacaagcc tgtcgcacct tgaatcaacg gttccaatat
     5941 aaaccctgcg atttcatcat ttctttcaat tagaatttgc tctatattcg ttaaaatagc
     6001 tgtcatcatt tcattttcag tatcgtaatt actgcgatag aaagatgggc tttctacttg
     6061 aatattctca aatattaagt ctttaaatat tttatgaaag gtcttgatac caccaacact
     6121 taccgcacca atcgtatccc catgataacc gtaatttagc gttataaact tgtttttctt
     6181 ggcatatttt tctctatcaa tatttttcca atactgatat gccatcttta ttgcgatttc
     6241 aacagacgca ctgcctgtat cagaataaaa tacttttctt agattacttg gcgtgatttc
     6301 gattaatttt tccgcaagtt ctattgacgg aatatttgat gatcctagca gcgtagaatg
     6361 ggcaatttta ttgagttgct ttttaattac cttatttaag tatttattat tatgaccatg
     6421 cacattgacc cacaacgatg cataaccatc taaatattta ttgccattcg tatcgtaaag
     6481 gtagctaccc tttccttttt caatgatgat tgcttcttct ttgctatata cacccatttg
     6541 tgtaaatgga tgccaaacat attctgagtc tttttgttta agttgttgtg tgtaattcat
     6601 ttttaactcc tattaattgt tttaaaaatg cttctgagaa attttcatac gtggcatgtt
     6661 cttcaaatgt atagactgtt ttatttgtta attttccaat cgtcatttga ttgtcttttt
     6721 caatatagct gtctgtatag cgattcatta ttaaaaaatt actcgctgat acattctgat
     6781 taacataatc ttggtgaaca atggcatcgc taatagcacc taattttgat ggcaacacac
     6841 tgatgacaca atctgcacaa tcattgatta gatctttagt catgtagaaa tcatctgtac
     6901 cttcatatat tggtacggca attcccccag ccccctcaat taagataaaa tcaaattcct
     6961 tatctaaaac ttttacctta tctaatacac gctgcttatt tagaaaaatt tgatctgcca
     7021 ttttaaatgc aaggtgtggt gatacaggtt gcttaaaagt ataaagtgac gttatgtcat
     7081 agcttaaatc acattcattt ttaaatactt ctaaatctgg aaatgtcccg tcttggcgtt
     7141 cctcagtttg aaatggttta aaaacacaaa cacgatgacc acgtgttttc aaagcatggt
     7201 ataaatgctt tgtaacatag gttttgccta catcagtatt cgtacttgta ataaaaatcc
     7261 tcataaaaaa taagcacctc aatccgaatg taaactttta taattaataa gtttacattt
     7321 aaggcgcatg tttttcaaga aaacatgaat ttaaacttct cagtataact ataaattttg
     7381 gcaaaatttt gaccttgcta ttgaaatgac taaggcttct tacagaattc gggcagatat
     7441 aaacagcgat tcgataaaat atgtcagtta aaattaataa ttgcattatt tcttaataaa
     7501 aagacatcct agctttacca tgttgtgaaa caatccatta attgtaatat tacgttgagc
     7561 gccttgttca tcaatgatat aattagttac ataataaatt gaacatctaa atacaccaaa
     7621 tcccctcact attgccctag tgaggggat
//
LOCUS       DAKPJH010000117         7553 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.117, whole genome shotgun sequence.
ACCESSION   DAKPJH010000117 DAKPJH010000000
VERSION     DAKPJH010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7553
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.117"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            322..1623
                     /locus_tag="OY092_002264"
     CDS             322..1623
                     /locus_tag="OY092_002264"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HCX1077186.1"
                     /translation="MRMIDIIEKKRDGHTLTTEEINFFIDGYVKGDIPDYQASSLAMA
                     IYFQDMNDDERAALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAV
                     DVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPA
                     DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALA
                     HAMVRIGNNVGRNTMAIISDMNQPLGRAIGNALELQEAIDTLKGHGPKDLTELVLTLG
                     SQMVVLANKAETLEEARALLIEAIDSGAALEKFKTFIKNQGGDETVIDHPERLPQAQY
                     QIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGE
                     SLLTIHSNRQDVDDVVKKLDSSITIADHVVSPTLIHKIITE"
     gene            1637..1987
                     /locus_tag="OY092_002265"
     CDS             1637..1987
                     /locus_tag="OY092_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077187.1"
                     /translation="MNILRYLLGIGFSVIGVLHFTRERQFRNIIPKCLPLRKTAVLVT
                     GIFEILFGLALLIKRPSQCLKNTINLFLLAVFPANIYMAVKKLPLGDKQLPTWQLYLR
                     LPMQFVLMGLIKKL"
     gene            complement(2139..2609)
                     /locus_tag="OY092_002266"
     CDS             complement(2139..2609)
                     /locus_tag="OY092_002266"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HCX1077188.1"
                     /translation="MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQ
                     PNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFINHDNYDDVLNIV
                     EATLNDVLKATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK"
     gene            2920..4104
                     /locus_tag="OY092_002267"
     CDS             2920..4104
                     /locus_tag="OY092_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HCX1077189.1"
                     /translation="MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLID
                     RLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGHNIIGTAS
                     VLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNE
                     TYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRV
                     HGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGP
                     IQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIG
                     SRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGN
                     GK"
     gene            4104..5297
                     /locus_tag="OY092_002268"
     CDS             4104..5297
                     /locus_tag="OY092_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HCX1077190.1"
                     /translation="MTNNGNEPNLTLSDLYDKDVVYTSRPSYISNPWLKPDEHQSNFL
                     TGRELLIANQLPVIVHEASATDKLHQLFQVIGKDVPNSIYTFNNQQSYENLIKQLAHK
                     ENKKIYFQYIHDETILNQQYYALDKTLFVALNNKARIPEWTNGKFLPKRKVVKIEQFE
                     NEIKNWEFPFVIKPGDDLPTAGGYGVMICYHDADLQKAITRIKEATAETNSLIIEQKI
                     EEKANYCVQFAYSESLGIQYLGAATQLTDKYGFYNGNENTTNVPEHVIEAGRQIMENG
                     VNQGFFGVAGFDLLVDEDDNVYAIDLNFRQNGSTSMLLLANELNSGYQKFYSYHSKGD
                     NTHFFNTILKYVKEGSLYPLSYYDGDWYGEDKVKSRFGCIWHGDSKETVLENERAFLA
                     ELEHY"
     gene            5696..6367
                     /locus_tag="OY092_002269"
     CDS             5696..6367
                     /locus_tag="OY092_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2750 domain-containing protein"
                     /protein_id="HCX1077191.1"
                     /translation="MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEE
                     SVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAV
                     TQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSI
                     KNRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLS
                     NELTF"
     gene            complement(6497..7300)
                     /gene="coaW"
                     /locus_tag="OY092_002270"
     CDS             complement(6497..7300)
                     /gene="coaW"
                     /locus_tag="OY092_002270"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II pantothenate kinase"
                     /protein_id="HCX1077192.1"
                     /translation="MKVGIDAGGTLIKIVQEQDNQRTFKTELTKNIDQVVEWLNQQQI
                     EKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS
                     LHYFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIY
                     KDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTE
                     NIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLGK"
BASE COUNT         2613 a         1064 c         1478 g         2398 t
ORIGIN      
        1 gttcaaatta tgcaaggttt agaagcagat tcagattact aattttataa aaaacatgta
       61 agcatgggac atcgtaacca tatataagta tgtcgatatc agctttaaga catcataaat
      121 gccatgatga ttctaagata atttaatagg gactttgacg ttataaccaa tctatttaag
      181 aataataaca tcgcatttaa attgtgatat taaaaatgaa atcgatagct tgctataata
      241 attttcgctt gtgcttttaa aaatggacta gagaaagcgc agatgctttg tcctaagctt
      301 tttaagaaaa ggatgataaa aatgagaatg atagacatta ttgagaaaaa gcgtgacggt
      361 catacgctaa caacggaaga aattaatttc tttattgacg gctatgttaa aggggatatt
      421 cctgattacc aagcatcaag tttagcaatg gcgatttatt tccaagatat gaatgatgat
      481 gagcgtgcag cattaacgat ggctatggtt aattctggtg atatgataga tttgagtgat
      541 atcaaaggtg tcaaagtaga taagcactca acaggtggtg taggagatac aactacgttg
      601 gttttagcac cattagtagc agctgtagat gttcctgttg caaaaatgag tgggcgtgga
      661 ttaggtcata caggtggtac gattgataaa ttagaagcaa ttgatggttt tcatgttgaa
      721 atagatgaag caacatttgt gaaattggtt aatgaaaata aagtggcagt tgtaggacaa
      781 tcaggaaatt taactcctgc agacaaaaaa ttatatgcct taagggatgt tactggtact
      841 gtcaattcaa taccattaat tgcctcttca attatgagta aaaagattgc tgctggtgca
      901 gatgcaattg tattagatgt aaaaactggt agcggtgcat ttatgaaaac attagaagat
      961 gctgaagcat tagcgcacgc aatggtacgt attggtaata atgtgggacg taatacgatg
     1021 gcgattattt ctgatatgaa tcagccactt ggacgtgcga ttggcaatgc gcttgagtta
     1081 caagaagcaa ttgatacgtt gaaaggacat ggtccgaaag atttaacaga acttgtacta
     1141 acattaggtt ctcaaatggt tgtacttgca aacaaagctg aaacgcttga agaagcgaga
     1201 gcattgctaa ttgaggcaat tgattcaggt gcagcattag aaaaattcaa aacatttatt
     1261 aaaaaccaag gtggcgacga aacagttatt gaccatccag agcgtttgcc acaagctcaa
     1321 tatcaaatcg aatataaagc taaaaaatca ggttatgtga ctgagttagt ctctaacgat
     1381 ataggtgtcg cttcgatgat gttaggagcg ggacgtttaa caaaagagga tgatattgat
     1441 ttagcggttg gtattgtttt aaataaaaaa attggtgata aagtagaaga aggagaatca
     1501 ttattaacga ttcacagtaa tcgccaagat gtagacgatg ttgttaaaaa attagattca
     1561 agcataacaa ttgctgatca tgttgtatcg cctacattaa ttcataaaat cattacagag
     1621 taggagttga agctgattga acatactaag atatttatta ggaataggtt ttagtgtaat
     1681 aggtgtattg cattttacac gagaacgaca atttagaaat atcataccga aatgtttgcc
     1741 acttcgaaaa acagcggttc ttgttacagg aatctttgag atattatttg gacttgcact
     1801 tttaattaaa agaccatctc aatgcttgaa aaatacaatc aatctattct tgctagctgt
     1861 attcccagct aatatctata tggcagttaa aaagttacct ttaggagata aacaattgcc
     1921 aacatggcaa ctatatttaa ggttacctat gcagttcgtg ttaatgggac taattaagaa
     1981 attatagtgg ttcttaaata aatcggacaa atgttaaaga ttttactttt tcatttgttc
     2041 gattttttga ctttgaagca taataaaaag cagttggaca atggcgattg taacatcatt
     2101 gttcgactgc ttttctgatt aacttgatcg actaagattt attttcctgt accgaaaaca
     2161 tcatgccatt cgtttcgttt gtctagaaat gcttgagcga tagttttagc accttctaat
     2221 gaatgacttg ctgcccagcc acattgtact tcattacaag caggcacttc agtagctttt
     2281 agcacatcat ttaaagttgc ttcaacaata tttaatacat catcataatt atcatgatta
     2341 ataaatgata catagaaacc agtttggcaa cccataggac ttaaatcaac aactttgtca
     2401 ctatgatttc taatattttc agccattaaa tgttctaatg aatgtagtcc gggcatatcc
     2461 atatgttctt tgtttggttg tttgaaacga atgtcgtatt tgtgaatgac atctccgttt
     2521 aatccttcca tcgttcccgc taatctaata aatggggcaa ccactttagt atgatctaaa
     2581 ttgaaacttt caacattcat ttttgtcatt ttgaatttcc tcctattaac tactcaaaac
     2641 tataaaacgc ttatgatttg ttgcattata aaacttaagt ttgttgtaag ttgtgtttct
     2701 aacaatactt aaattgtaac aatagggctt atgttttaca atttgaaact gttttataaa
     2761 tttatgaaag gcttttagtt attagaaaat tttgtaaata aagaaaaact agatgacatc
     2821 atgagataaa accgatagaa taagtaataa ttcattttga aagaacaaaa tattgtggat
     2881 gattaaaatg agtgtagggt aaaagggaga tagtaaaaaa tgagtgaaaa acaacaaatt
     2941 ctcgattata tagaaacaaa taaatatagt tatatcgaaa tcagtcatag aattcatgaa
     3001 cgtcctgaac ttggtaatga agaaatattt gcgtctcgaa ctttaataga tcgtttgaaa
     3061 gagcatgatt ttgaaattga aaccgagatt gctgggcatg caactgggtt tatagcgaca
     3121 tatgattcag gtcttgacgg gccagctata ggttttttag cagaatacga tgctttgcca
     3181 ggattgggtc atgcttgtgg tcataatatc attggaactg caagtgtgct tggtgcaatt
     3241 ggtttgaagc aagtgattga ccaaattggt ggtaaagtag tcgttcttgg atgtccagct
     3301 gaagaaggtg gggaaaatgg tagcgctaaa gcttcttatg tcaaggctgg tgtgattgat
     3361 caaatagaca ttgccttaat gattcatccg ggaaatgaaa cttataaaac gattgatact
     3421 ttggcagtgg atgttttaga tgttaaattt tacggaaaaa gtgctcatgc ctctgaaaat
     3481 gcagatgaag cgttaaatgc attagacgct atgattagtt attttaatgg tgtagcacaa
     3541 ctacgacaac atattaaaaa agatcaacgt gtgcatggtg tgattctaga tggcgggaaa
     3601 gcagctaata ttattccaga ctatacacat gctcgttttt atactagagc aatgacgcgt
     3661 aaagaattgg atatattaac agaaaaagta aatcaaatcg cacgtggagc tgcgatacag
     3721 actggttgtg attatgaatt tggtccaatt caaaacggtg tgaatgaatt cattaaaacg
     3781 ccgaaattag atgatttatt tgctaaatat gctgaagaag ttggtgaagc agttattgat
     3841 gatgattttg gttatggctc tacggataca gggaacgtaa gtcatgttgt gccaacaata
     3901 catcctcata ttaaaatagg atcacgtaat ttagtaggac atacgcatag atttagagaa
     3961 gcagctgcga gtgtacatgg tgatgaagca ttaattaaag gtgctaaaat aatggcgttg
     4021 atggggttag agttaattac aaatcaagac gtttatcaag acattattga agagcatgcg
     4081 catttgaaag ggaatgggaa gtaatgacaa ataatggtaa tgagccgaac ttaacgttaa
     4141 gtgatttata tgacaaagat gttgtctata cgtcaagacc ttcgtatata tcgaatccat
     4201 ggttgaaacc ggacgaacat caatctaatt ttttaactgg tagggagtta ttaatagcaa
     4261 atcaattacc tgttattgtt cacgaagcta gtgcgacaga taaattgcat cagctatttc
     4321 aagttattgg taaggatgta ccgaactcaa tttatacatt taacaatcag caatcttacg
     4381 aaaacttgat taaacaattg gcacataagg aaaataaaaa gatttatttt caatatattc
     4441 atgatgaaac aatcttgaat cagcaatatt atgcattaga taaaacgtta tttgttgctt
     4501 taaataataa agcaagaata cctgaatgga caaatgggaa gtttttacca aaaagaaaag
     4561 ttgtaaaaat tgagcaattc gaaaacgaga ttaagaattg ggaattcccg tttgtaatta
     4621 agccgggaga tgatcttccg acagcaggtg gctatggcgt tatgatttgt tatcatgatg
     4681 cagatttaca aaaagcgata acgcgtatta aagaggcaac tgctgaaacg aattcgctta
     4741 ttatcgaaca gaagattgaa gaaaaagcga attattgcgt tcagtttgca tactcggaat
     4801 cgctaggcat tcaatatctt ggtgcggcaa cgcaattaac ggataagtac ggattttata
     4861 acggaaatga aaatactact aatgtaccag agcacgttat agaagcaggt agacaaatta
     4921 tggaaaacgg tgtgaatcaa ggattctttg gtgtagctgg ttttgaccta ctcgtcgatg
     4981 aggatgataa cgtttatgcg attgatttaa actttagaca aaatggttca acgagcatgt
     5041 tattacttgc taatgagttg aattcaggat atcaaaagtt ttatagttat cattcaaaag
     5101 gtgataacac acatttcttc aatacgattt tgaaatatgt caaagaaggt agtttatacc
     5161 cgttatctta ttatgatggt gattggtacg gtgaagataa agttaaatca aggtttggct
     5221 gtatttggca tggagattca aaagaaacag tactggagaa tgaacgcgca tttttagctg
     5281 aacttgaaca ctattagagt tcggaacata aggcgctaca atgttatgtt gccagtagtt
     5341 gactgaatat gcgcttgtaa caagcttttt tcgattctag tcaacaataa ttaaatttat
     5401 gatatggcaa tactttgtaa tactaatatt aaatggcgac ttttatttca ctatgttata
     5461 agagttgcca ttttgttgat aaaggtatac taaaggttat cgttttgaaa tttttagtaa
     5521 ctagatatgt ttcgtgttat agaccgaatt tgtgtatacg taaaatttaa tgctattgaa
     5581 tttttaaaat gaaaaacatg acattaaatt gaattcataa tatgtctaat tgactaactt
     5641 gttggagtca tttactattt tatgtatgac atattttaaa aagtgagggt caagcatgtc
     5701 ttataaagca tatccattct ttagagatat attaataaat gaatgtattt atttcgcctc
     5761 taaaaataaa aaactagtac gcctaaatta taaaagtgaa gcgtatgtag gcgtttggac
     5821 agaagaaagt gtggccgtat catttttaac aagtcgtgat attccatttg ataaagttgt
     5881 aaaaatggac gttgatcgtt ttgctactta tgaattagat gaattgtttg atgaacaaga
     5941 ccatattatt atgaatcaaa caatggaaga agaagggcat ctactaaacg ttgtagctgt
     6001 tacacaagaa gtgatgacgg aattagataa aattagaatc aaagaatttg tccaagatgt
     6061 agcgaaatat gatgaagtat acggcttaac taaaaaaggt agtaagcagt ttattctcat
     6121 tagtgaaaat gatagcgacg aaaaaaagcc gcatattatg cctgtatgga gtattaaaaa
     6181 cagagcgtta aaagttcgag atgaagattt tgaagagtgt gatttaatta cgattgaagg
     6241 ttctgttttc ggagaatggc tagatgaact tagagatgat cataaagccg ttgcgataga
     6301 tttaaaaact ggcgtggttg gtacaattgt ttcagcgcaa aaattgtcta atgaacttac
     6361 attttaattg aattgagttg taagtaatta agtgataata aatggaacaa tacgtattca
     6421 aaacacgtag accataaaat aaaaggccat ttatatagcg tttatttaaa acaacgctca
     6481 tataaatggt ctttttctat tttcctaaat ataatgcacc aatagcacct gaaaatgcgc
     6541 cgttttcaac atagtacggt ttgcaaccgc gtaacacagt ataatcttcc acaactttgc
     6601 gtaataaagc gttattatga aatgaagaac cgatataaac gatattttca gttttaaatt
     6661 cacgtgcaac agtaatggcc attgtcgtaa caacttcgcc aacgacacca ataacggctg
     6721 ctaatttatt gctaggtgta aaatcagcat ctaaatgatg tagtacatga ccaaaattag
     6781 ctgctgttaa atcaccggga atgggtggtt cggtatcttt ataaatatgt ctaaccttta
     6841 aatcgatagt gttacgatca ccgtgttgtg ccatgtcagt taactgttta taatcagtga
     6901 tttgacttag taaataaccg agtccttgaa tcatgccacc acctgtaccg ataccgccta
     6961 cacgacgttg tgattggcca tcgaaataat gtagtgacgt accggtacca acatttgcaa
     7021 aaatataatc tgctaagtca tggccttgct cttttaacaa aatacctagt ccttgagatg
     7081 cagcatcaaa ctctacaaaa atttgtgcag gaatgttgat gttttcagca atgacacctg
     7141 cattacctcc agttaagcat aatttttcaa tttgctgttg gtttaaccat tccacaactt
     7201 gatcaatatt tttagttaat tcagttttaa aagtacgttg gttatcttgc tcttgaacga
     7261 ttttaattag tgtaccgcca gcgtcaatgc caactttcat aagattccca cctcattatt
     7321 aatgtctatc cttaaataat agtatagtaa aatgactaaa aaacaagtaa taatagtaat
     7381 tattaacaaa tttgatgcca ttgtatttca acattgtaag cgtatcgcaa ttaatgtatt
     7441 acaaacgtag acgttaagtt atatatatta ttttctagga attttgaagt tgtataggat
     7501 tgttagttag tgacgcaata ttaaaagtag ttcgtacgca gtgtatttgt aag
//
LOCUS       DAKPJH010000118         7506 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.118, whole genome shotgun sequence.
ACCESSION   DAKPJH010000118 DAKPJH010000000
VERSION     DAKPJH010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7506
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.118"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..73
                     /locus_tag="OY092_002271"
     CDS             <1..73
                     /locus_tag="OY092_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="competence protein ComGF"
                     /protein_id="HCX1077193.1"
                     /translation="KSIIKITITVKVGTNVQTKTIYV"
     gene            170..316
                     /locus_tag="OY092_002272"
     CDS             170..316
                     /locus_tag="OY092_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077194.1"
                     /translation="MMLTAIYFSIFTFYISQYSLKLKTLYNIETDYNYKIVLLLKEGK
                     THES"
     gene            306..830
                     /locus_tag="OY092_002273"
     CDS             306..830
                     /locus_tag="OY092_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HCX1077195.1"
                     /translation="MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKY
                     KLTIPEIFSKHGEQYFRNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIW
                     LDCNIDIIYSRINDDPHRPNANNKTIMQLNDLYCSRILRYNEIAFKKFDSHLLSISEI
                     YYELLNLIKASDQY"
     regulatory      817..914
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            989..2080
                     /gene="gcvT"
                     /locus_tag="OY092_002274"
     CDS             989..2080
                     /gene="gcvT"
                     /locus_tag="OY092_002274"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HCX1077196.1"
                     /translation="MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVR
                     YEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLV
                     IYQLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLIN
                     QLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEY
                     NVMPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQ
                     KENGAPRRTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRD
                     EFEMGKELLVQVRKRQLKAKIVKKNQIDK"
     gene            2100..3446
                     /gene="gcvPA"
                     /locus_tag="OY092_002275"
     CDS             2100..3446
                     /gene="gcvPA"
                     /locus_tag="OY092_002275"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HCX1077197.1"
                     /translation="MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNI
                     AEGEAETTLLRRLNRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTP
                     YQPEISQGELQAIFEFQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVV
                     SKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFY
                     GSIEDLEKIHSFIEDKKALFIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGG
                     PHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQA
                     LNALASSIAMSALGRQGIYDIAVQNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDK
                     PIQQVNEELVKYNIIGGFDLGVVSDDFKNHMLIAVTELRTKDEIDTFVEKAGELND"
     gene            3439..4911
                     /gene="gcvPB"
                     /locus_tag="OY092_002276"
     CDS             3439..4911
                     /gene="gcvPB"
                     /locus_tag="OY092_002276"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HCX1077198.1"
                     /translation="MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKN
                     KAEFPEVAELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESH
                     PLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGE
                     GHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTN
                     PNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFT
                     GPHGGGGPGSGPVGVVKELASYLPKPMVIKDGNKFKYDNDIKNSIGRVKPFYGNFGIY
                     LRAYTYIRTMGATGLKEVSEAAVLNANYIKARLSEHFEIPYKQYCKHEFVLSGVRQKE
                     FGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDTLISIAEE
                     AKNDPDKVLEAPHTTVIDRLDEATAARKPILKFENLKQEK"
     gene            complement(5276..5662)
                     /locus_tag="OY092_002277"
     CDS             complement(5276..5662)
                     /locus_tag="OY092_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HCX1077199.1"
                     /translation="MSASLYIAIILVIAIIAYMIVQQILNKRAVKELDQNEFHNGIRK
                     AQVIDVREKVDYDYGHINGSRNIPMTMFRQRFQGLRKDQPVYLCDANGIASYRAARIL
                     KKNGYTDIYMLKGGYKKWTGKIKSKK"
     gene            5820..6650
                     /locus_tag="OY092_002278"
     CDS             5820..6650
                     /locus_tag="OY092_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HCX1077200.1"
                     /translation="MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWN
                     PATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMP
                     STVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVV
                     EGRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAI
                     NDISDKHITISQMEEAFEKGFKKGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
                     "
     gene            complement(6714..6932)
                     /locus_tag="OY092_002279"
     CDS             complement(6714..6932)
                     /locus_tag="OY092_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077201.1"
                     /translation="MRNIIFYLVLIIAAIGLVMNLDAFIFSIVRMLVSFAVIAGIIYL
                     IYYFFILTEDQRKYRKAMRKYKRNQRRK"
     gene            complement(6946..>7506)
                     /locus_tag="OY092_002280"
     CDS             complement(6946..>7506)
                     /locus_tag="OY092_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077202.1"
                     /translation="VGATLLLAGCGSQNLAPLEEKTTDLREDNHQLKLDIQELNQQIS
                     DSKSKIKGLEKDKENSKKTASNNTKIKLMNVTSTYYDKVAKALKSYNDIEKDVSKNKG
                     DKNVQSKLNQISNDIQSAHTSYKDAIDGLSLSDDDKKTSKNIDKLNSDLNHAFDDIKN
                     GYQNKDKKQLTKGQQALSKLNLNAKS"
BASE COUNT         2653 a         1016 c         1358 g         2479 t
ORIGIN      
        1 taaatctatt attaaaataa cgataacagt taaagtcggt acaaatgtgc agactaaaac
       61 tatttatgta taacttacta gaatttaaat gagtactatt aaaaaggatg tgaaataatt
      121 tattaatttt gatttatata aagaaaaagg atatgttacg ccgttcttat tgatgctaac
      181 agcaatttat ttttccattt tcacttttta tatcagtcaa tatagtttaa aattaaagac
      241 attatataat attgaaactg actataacta taagattgtt ttgttattga aagaagggaa
      301 aacgcatgaa tcatgataaa tcaccaataa ttttaattgg tttcatgggt accggtaaat
      361 ctacgattgg taaatacgtt gcagatgagc aaaatttatc atttattgat atagattcat
      421 atatcgaaga aaagtataag ttaacaatac cagaaatatt tagtaaacat ggtgaacaat
      481 atttcaggaa tttagagttc acatgtttgc aagaatgtat taacactgca gatataattg
      541 ctactggtgg tggtattatt gaaagtgaag aggcatttaa ttttttgaaa aatcaaaaaa
      601 acattatttg gttagattgt aatattgata ttatatatag tcgaatcaat gatgacccac
      661 atcgacctaa tgcaaataat aagacaatca tgcagttaaa tgacttgtat tgctcgcgga
      721 ttttaagata taatgaaatc gcattcaaga aatttgatag tcatttgcta tcaatttcag
      781 aaatatatta tgaattgcta aatttaataa aagcgagtga tcagtattag agagaataga
      841 gcgttaagac tctatcgccg aaggtgcaag taatttatta cgaaactctc aggcaaaagg
      901 ataatactgt aacgcgttcc tgaattggtg atttataaac agggtagcga ttgctatcct
      961 gtttttataa ttttaagggg gtatttcaat gtcaagtgat ttaaaacaaa cacctttata
     1021 tcaaaattat gttgatagag gtgcaaaaat tgtggaattc ggaggatggg cgatgcctgt
     1081 tcaattttct agtattaaag aggaacataa tgctgttcga tacgaaatag gcctgtttga
     1141 tgttagtcat atgggtgaaa ttgaagtaac aggtaaagat gctagtcagt ttgtgcaata
     1201 tttattatca aatgatactg ataatttaac tacttcaaaa gcattatata ctgctttatg
     1261 taatgaagaa ggcggtatta ttgatgattt agtaatatat caattagctg acgacaatta
     1321 tttattagtt gttaatgctg ctaatactga aaaagatttt aattggattt taaaacacaa
     1381 agagaaattt gatgttgaag tacaaaatgt atcaaaccaa tatggtcaat tagcaataca
     1441 aggaccaaaa gctagagatt taattaatca attagttgat gaagatgtaa ctgaaatgaa
     1501 aatgtttgaa tttaaacagg gtgtcaaatt atttggagca aacgtcattt tatctcagtc
     1561 aggttacaca ggtgaagatg ggtttgaaat ttattgtaat atcgatgata ctgaaaaaat
     1621 ttgggatggt ttattagagt ataatgttat gccatgtgga ttaggcgctc gtgatacatt
     1681 aagattagag gctggattgc cattacatgg tcaagattta actgaatcaa ttacaccata
     1741 tgaaggtggt atcgcttttg caagtaaacc attaattgat gctgatttta ttggtaaatc
     1801 tgtattaaaa gatcaaaaag aaaatggtgc accaagaaga acagtgggat tagaattact
     1861 tgaaaaagga attgcaagaa ctggttatga agttatggat ttagatggaa atattattgg
     1921 agaagtaact tcaggaacac agtctccatc atcaggaaaa tcaattgcac ttgcaatgat
     1981 aaaaagagat gagtttgaaa tgggtaaaga gttgcttgtt caagttcgta agcgtcaatt
     2041 aaaagcgaaa attgttaaga aaaatcaaat tgataaataa ttaaaaaggg gtgtgcattg
     2101 tgagtcatcg ttatatacct ttaactgaaa aagacaagca agaaatgtta caaacaattg
     2161 gtgcaaaatc tataggagaa ttattcggtg atgtaccaag tgacatttta ttaaatagag
     2221 atttaaatat tgctgaaggc gaagcggaaa caacgttact tagaagatta aatcgcattg
     2281 caagcaagaa tatcactaaa gaaacgcata catcattttt gggtgctggt gtttatgatc
     2341 attacgcgcc atcagttgtg gatgctatga tttcaagatc agaattttac acagcatata
     2401 cgccatatca accggaaatt tctcaaggtg aattacaagc catttttgag ttccaaactt
     2461 taatttgtga attaacagat atggatgtag caaattcttc tatgtatgat gggatgacta
     2521 gctttgctga agcatgtatt ttagcattta gtcaaacaaa gaaaaataaa attgtagtct
     2581 caaaaggttt acattatcaa gcattacaag tacttcatac ttatgctaag acacgcaagg
     2641 aattcgaagt agtggaaatc gatttagatg gcactgttac agatttaaaa aaattagaag
     2701 cagcagtgga tgatgaaaca gcagctgttg cagtacaata tccaaacttc tacggttcaa
     2761 ttgaagatct tgaaaagatt catagcttta ttgaagataa aaaagcatta tttatcgtat
     2821 atgcaaatcc attagcattg ggattactta cacctccagg ttcatttggt gcagatattg
     2881 ttgtaggtga tactcagcca ttcggaattc ctgctcaatt cggtgggcca cattgtgggt
     2941 attttgcaac gacgaaaaag ttaatgcgta aagtgccagg tagattagtc ggtcaaacac
     3001 aagatgatga aggtaatcgt ggctttgtat taacactaca agcacgtgaa caacatattc
     3061 gacgcgataa agcgacatct aatatttgtt ctaaccaagc attaaatgct ctagcgtcat
     3121 caattgcaat gtcagcactt ggtagacaag gtatctatga tattgcagtt caaaatatag
     3181 aacatgctaa ctatgctaaa caacaattta ttaaaaaagg ttttgaagta ttagatggta
     3241 catctttcaa tgagtttgta gtcaaatttg acaaaccaat tcaacaagtt aacgaggaat
     3301 tagtgaagta caatattatc ggtggttttg atttaggtgt tgtttcagac gactttaaaa
     3361 atcatatgtt aatagctgta actgaattaa gaacaaaaga tgaaatcgat acatttgtag
     3421 aaaaggctgg tgagttaaat gactagtaaa tcaagtccat taatttttga aagatctcgt
     3481 gaaggcagat atgcatattc attaccaaaa agtgatatta aaacaaattc tgttgagtca
     3541 ttgttagatg ataaatttat tcgtaaaaac aaagcggagt ttccagaagt tgctgaacta
     3601 gacttagtac gtcattatac tgaactttca aataaaaatt tcggtgtaga taacggattt
     3661 tatccattgg gttcatgtac gatgaagtat aaccctaaaa ttaatgaaaa ggttgctaga
     3721 ataccaggat tcagtgaatc acatccatta caagatgaag accaagtaca aggttcatta
     3781 gaaattattt atagtttgca agaagaatta aaagaaatta ctggtatgga tgaggtaaca
     3841 ttacaaccag ctgctggtgc acatggtgaa tggactgcat tgatgatatt taaagcttat
     3901 catgagaata atggtgaagg tcatcgtgat gaagtcattg tgccagattc tgcgcatggt
     3961 acgaatccag cctcagcttc atttgcagga tttaaatcag ttactgtaaa atcaaacgaa
     4021 cgtggcgaag ttgatattga tgacttgaaa cgtgttgtaa atgaaaatac agcagctatt
     4081 atgttaacta atccaaacac tttaggtatt ttcgaaaaaa atattatgga aatccgtgaa
     4141 atcgtccata atgctggtgg tctattatat tatgatggtg cgaatttaaa cgctattatg
     4201 gacaaagttc gcccaggaga tatgggattt gatgctgttc atttaaactt gcataaaaca
     4261 tttactggtc cacatggtgg tggcggtcct ggttcaggtc cagtcggtgt agtaaaagaa
     4321 ctagcaagtt acttaccaaa gccaatggtt attaaagatg gcaacaaatt taaatatgat
     4381 aatgacatta aaaattctat cggacgtgta aaaccatttt atggtaactt tggtatttac
     4441 ttaagagctt atacgtatat tagaactatg ggagcaactg gacttaaaga ggtttctgaa
     4501 gcagcggttc ttaatgcgaa ttatattaaa gcacgtttat ctgaacactt tgaaatacct
     4561 tataaacaat attgtaaaca cgagtttgtg ttaagtggtg tgcgtcaaaa agaatttggt
     4621 gtacgtactt tagacatggc taagcgatta ttagatttcg gtgtacatcc accaacaatc
     4681 tacttcccat taaatgttga agaaggtatg atgattgaac cgactgagac agagtctaaa
     4741 gaaacacttg attattttat cgatacatta attagtattg ctgaagaagc taaaaatgat
     4801 cctgataaag tgttagaagc accacataca actgtgattg atcgattaga cgaagctaca
     4861 gctgctcgta aaccaatatt aaaatttgaa aatcttaaac aggaaaaata aagtattaaa
     4921 cacatattcc gagaattatt attctaactt tgtatgaaga tttaaggata atggtttcaa
     4981 aatcaattga aaaagacaat ttctatttga acaagaaaac taaaccgaag taataactct
     5041 tagggtttgg tattattctt tcatagaaat tgtcttttca ttttttagat tgcggtaatt
     5101 gaatcgtatt gaaaatgagc tgaactttct ttattatgct gaaactaagt ttaatgatca
     5161 gtgaagctag agaaatatag taacagactt tgttaaaaaa ttaaaatctg agtattgtta
     5221 ttgatgatca attaacactc agattttatt aaatcgtata ttaaatttac aaaaactatt
     5281 ttttagactt tatttttcca gtccattttt tatagccgcc ttttaacata tagatatctg
     5341 tatatccatt ctttttcaaa atacgagcgg ctctatagct agcaatccca ttggcatcac
     5401 ataagtatac cggttggtct tttcttaatc cttggaatcg ttgcctgaac attgtcatag
     5461 gaatattgcg agacccatta atgtgaccgt agtcatagtc aactttctct ctaacatcga
     5521 tgacttgagc ttttctaatc ccattatgga attcattttg atctaattct ttaacagctc
     5581 gcttgttaag aatttgttga acaatcatat aagcaataat tgctataact aaaattattg
     5641 cgatgtacaa actagcactc atcttgcatc ctccctaatt aaacgataat ataattataa
     5701 gactgttagg tcaaattatc aaaatatttc actaaagaat tgcaattatt attcatttag
     5761 ttaaattgat taattagcga atcaaatatt atacattttg ctgataggag ttcttgaata
     5821 tgactgaaac ttggaatttt attaatacag gaagtaaaga cccatattat aatatggcaa
     5881 tggatgaagc gttattaaat tttgtctcta gaggtgaaat tgatccagtt atacgttttt
     5941 acacatggaa tcctgcaaca ttatcaatag ggtatttcca aaggttacaa aaggaaattg
     6001 atatagataa ggttaaagag aaaggttttg gtctcgtaag gcgtcaaact ggtggccgtg
     6061 gggtgctaca tgataaagag ttaacttaca gtgtgattgt gcctgaatcg catccgaata
     6121 tgccttctac agttacagaa gcgtacagag tgatttcaca aggattatta gaaggattta
     6181 aaaacttagg atttgatact tattttgcgg tacctaaaac gcctgaagag cgtcaaaaat
     6241 taaaacaacc tcgaagttca gtgtgttttg atgcaccaag ttggtatgag ctagttgttg
     6301 aaggccgtaa gattgctggg agtgctcaaa cgagacaaaa gggcgtaatc ctccaacacg
     6361 gttcgatttt acaagatatt gatattgatg aactgtttga tatgtttatt tataaaaatg
     6421 aaagattaaa attaaaaatg aaagaggcat tcgttgaaaa agcagttgcc atcaatgata
     6481 tttcagataa acacattact attagtcaaa tggaagaagc tttcgagaaa ggttttaaga
     6541 aaggtttaaa tatagaatta aagccacttg aattaacaga agctcaattg gcagaagtgg
     6601 aagaattaac tgaaaaatat cgttcagatg aatggatgtt tagaaagtag tttttagaat
     6661 gaaaaatgga agcacgtaga ctattttacc tacaagtgct tccatttttt tatctatttt
     6721 cttctttgat ttcttttata cttacgcatt gctttacggt atttacgttg atcttcagtt
     6781 aaaatgaaga aataatatat aagataaata ataccagcta ttacagcaaa gctgactaac
     6841 attctgacga ttgaaaaaat aaaggcatct agattcatta ctaatccaat cgcagcaata
     6901 ataagtacaa gataaaatat tatattacgc attaacagac tcctatcatg attttgcatt
     6961 taagtttaat tttgacaacg cttgttgtcc ttttgtaagt tgttttttat ctttattttg
     7021 atagccattt ttaatatcat caaatgcatg attcaaatca gagtttaatt tatcgatatt
     7081 tttagacgtt tttttatcat catcactaag tgataaacca tcgatagcat ctttgtatga
     7141 agtgtgagca ctttgaatat cattagaaat ttgatttaat ttcgattgaa cattcttatc
     7201 gcctttgttt ttacttacat ctttctcaat atcgttatag gatttcaaag ctttagcaac
     7261 tttgtcgtag tatgttgatg taacattcat caatttaatt ttcgtattat tagatgcagt
     7321 ttttttactg ttttctttat ccttttcaag ccctttaatt ttagatttag aatcactaat
     7381 ttgttgatta agttcttgaa tatctagttt gagttgatga ttatcttctc ttaaatctgt
     7441 tgttttttct tctaatggtg ctaaattttg tgatccacat ccagctaaca ataatgttgc
     7501 gccaac
//
LOCUS       DAKPJH010000119         7227 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.119, whole genome shotgun sequence.
ACCESSION   DAKPJH010000119 DAKPJH010000000
VERSION     DAKPJH010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7227
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.119"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(47..1855)
                     /locus_tag="OY092_002281"
     CDS             complement(47..1855)
                     /locus_tag="OY092_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HCX1077203.1"
                     /translation="MHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSIHKCKGFSFHVL
                     LSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGK
                     FGLGEGRLNKFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQIIANVLANHQ
                     ITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASE
                     LASRYIEEVGDPLQIDIPSSKQNTSYIKPFPKSVTDGYMKHIQNMIGYIPKSDLQVVF
                     TSLHGTSVPIVPELLKSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDKAVELAN
                     KSHANLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQ
                     SIVSSELTKSLSRYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFV
                     RDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGFEGKKKI
                     NAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQINSPKSNVIRVLFDEGF
                     IALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS"
     gene            1987..2379
                     /locus_tag="OY092_002282"
     CDS             1987..2379
                     /locus_tag="OY092_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HCX1077204.1"
                     /translation="MKKVINVVGAIIFSDNKILCAQRSEEMSLPLMWEFPGGKVEKNE
                     TEKDALIREIREEMKCDLIVGDKVITTEHEYDFGIVRLTTYKCTLNKELPTLTEHKSI
                     EWLSINELDKLNWAPADIPAVNKIMTEG"
     gene            2381..5242
                     /locus_tag="OY092_002283"
     CDS             2381..5242
                     /locus_tag="OY092_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3427 domain-containing protein"
                     /protein_id="HCX1077205.1"
                     /translation="MSRLLNDFNQSLHKGFIDKDISHKGNYTPKLLVNNKNEKVLSTI
                     IDELQKCETFYFSVAFITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYGEL
                     LKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKN
                     GDLVDSVKNEFDLLWQKSIPLTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKS
                     VEIVPNLMQAEALRSLKAIRDKAKDKALIISATGTGKTILCALDVREVNPNKFLFIVH
                     NEGILNRAKEEFKKVLPIKNDSDFGLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDEN
                     EFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIR
                     LQAALESDILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTDYYGYSGE
                     ILQGLIFVSSKKEAYDLADKLSSKGIKSVALTGDDSVNYRQIVIEKLKEGKINYIITV
                     DLFNEGIDIPEVNQVVMLRPTESSIIFIQQLGRGLRKSANKEYVTVIDFIGNYKTNYL
                     IPIALSGDQSQNKDNYKKFLTNNDSINGVSTINFEEVAKKQIYNSLDAVSLNQNKLIL
                     KAYEEVENRLGHMPLLMDFIQQHSIDPSVIFSKFSNYYEFLVRYKKIDTLLTENESKN
                     LVFFSRQIAPGLKRIDSLVLEELLKNELTYDELKNKMLNEVKVITEDDIDTSLRILDF
                     SFYNAGIEKIYGSPIIECNERMIRLSDAFTNALSNQTFKIFLEDLIELSKYNNEKYQK
                     GKNGLILYNKYSREDFSKIFNWNKNGSSVIMGYMIRSQEMPIFITYDKHEDISDSTKY
                     EDEFLSQDELKWFTKSNRTLKSKEVQKILSHRAKGIKMYIFVQKKDDDGIYFYYLGTA
                     GYIEGSEKQDKMPNGSNVVTMDLALDKAVRDDIYRYITN"
     gene            5548..6297
                     /locus_tag="OY092_002284"
     CDS             5548..6297
                     /locus_tag="OY092_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1077206.1"
                     /translation="MIHSKRLRLWLYLVLLAVFISACNVKEDKQIKENFNKTLSLYPT
                     KNLDDFYDKEGFRDQEFDKRDKGTWIINSGMNIQLKGGALKSREMVLYINRNTRTAKG
                     YFLISETTEDKKGYVHNKDKKYPVKMEHNQIIPTKPIRDDKLKKEIENFKFFVQYGDF
                     KDYKDGDISYNPNVPSYSANYQLNNDDYNVQQLRKRYDISTKRAPELKLRGSGDLKGS
                     SVGSKELEFNFIRNKEGNVYFSDSINFKPTE"
     gene            6408..7193
                     /locus_tag="OY092_002285"
     CDS             6408..7193
                     /locus_tag="OY092_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1077207.1"
                     /translation="MMHSKKLMLGICLVLLIILIVGYVIMTKINSRSAQIKDTFNQTL
                     KLYPTKNLDDFYDKEGFRDQEFGKGDKGTWIINSGMNIQLKGGALKSREMVLYINRNT
                     RTTKGYFIVGEITKDKKGYTHDKDKKYPVKMEHNQIIPTKPIKDEKLKKEIEDFKFFV
                     QYGNFKDFKDYKNGDISYNPNVPSYSAKYQLSNDDYNVQQLRKRYDIPTKKAPELLLK
                     GDGDLKGSSIGSKDLEFIFVQNKRENIYFTDSVEFTPSEDDKS"
BASE COUNT         2776 a          911 c         1238 g         2302 t
ORIGIN      
        1 ataagtataa aatgaaatgt aatatttcga tgtttaaaat ttttaattag ctaaaaatca
       61 tcgcattaat tttttgagct acatcatcaa aattcggaca ttttaacgac acatataatt
      121 taattttagg ttcagtacca gaaggacgta aagcgataaa tccttcgtca aataagacac
      181 gaataacatt tgatttagga gaattaatct gcgacgttgt gtctttatcc aaatgataaa
      241 cctcgctagt taaataatct tcaattgctt tcactttcag tccttgaatc tcttgcggtg
      301 gatttgaacg gaatttggtc attattgcat taattttctt tttcccttca aatccttcta
      361 gcgtatgcga gaataatgta tcctcatgtc taccaacagt ttgataaatc tgttctaatt
      421 catctttcaa tgttttgcca tataatttta actcagaagc gtattttata atgagtggca
      481 caatttgtac ggcatcttta tcacgtacaa aaggctctga tagaaaaccg taactctctt
      541 caaatgcgaa aatcatattt tgatgatcat ccagttgtct tatttcctga gcaataaatt
      601 taaagcccgt cagcacctct ttgtattcaa cattattata gcgtgataat gactttgtta
      661 actcactact tacaatagat tgaatcatta agcggtgacg taattgagac gtttgttgaa
      721 tacgataatt aagtaacagc gcaccaattt ggttgccatt aaaatacgtg atatgaccat
      781 gtgcatcacg ttcagcaatg ccaagacgat ccgcatcagg atcagttgat attaataagt
      841 ttgcatgact tttatttgca agttcgactg ctttatcaaa agcgcgatga tcttcaggat
      901 tagcactttg aactgagcta aaattcggat caggtttaca ttgtgcttct acaagattaa
      961 attgattgaa attcaaagat tttaataact caggtacaat cggaacactt gtaccatgta
     1021 aactagtgaa cacaacttgt aaatcagatt taggaatata gccaatcata ttttgaatgt
     1081 gtttcatata gccatcagtt acagatttcg gaaatggctt gatataagat gtattttgtt
     1141 ttgaagaagg tatgtcaatc tgtaatggat cgccaacttc ttcgatataa cgacttgcaa
     1201 gctcagatgc atctgttgat agttgcgcac catcagaacc atatacttta atgccgttat
     1261 agtctttcgg attatgactt gctgtaatca taatgccagc agtagtatta agattgcgca
     1321 ccgcgaacga taattccggt gtcgttttat atgtatcagg taaataaact gttatttgat
     1381 ggtttgctaa tacattagca ataatttggg cgaattcagt tgaaagatgt ctaatatcat
     1441 aatgaatgac tattgttgga ctgtttgttt gggcatttaa ataacgcgct aaacctaatg
     1501 ccaatttttc aatagtaaac ttattaagtc gaccttcacc aagaccgaat tttccgcgta
     1561 tacccgcagt accaaatgtt aatttacttt caaaaccttc tcgctgttca atgtcagatt
     1621 gctgctcata aaaatgttta actaaactat cattagctct ttctatccat aattctttat
     1681 ccattgttgc taaacatcct ttcaaaatct cagttagact taataaaaca tgaaaactaa
     1741 agcccttaca tttatgtatt gaattataaa gaaatacgcc ccaaaagtaa aaaaacacag
     1801 ccccaagaca atacttttca caagtattat ataatagatg tgtatgaaaa tgcatggagt
     1861 agatgtaaga gtgatatatc atgcaggaaa atgtaaaata ttaattttta atattgattt
     1921 atatatagtt ttgtaatttt tgatagaata acaattaaga tgattttaaa ttgaagggtg
     1981 agtcttatga aaaaagtaat caatgtagta ggagctatta ttttttctga taacaaaatt
     2041 ctttgtgcac agagaagtga agaaatgagt ctgcctttaa tgtgggaatt tcctggaggt
     2101 aaggttgaaa agaatgaaac tgaaaaagac gctttgatta gagaaattag agaagaaatg
     2161 aaatgtgatc taattgttgg agacaaagtt ataactacag aacatgaata tgattttgga
     2221 attgttaggt taacaacata caaatgtact ttaaacaaag agttaccaac tctaactgaa
     2281 cataagagta ttgaatggtt gtcaataaac gaacttgata aattaaattg ggccccagcg
     2341 gatataccag ccgttaataa aattatgacc gagggataat atgagtagat tactaaatga
     2401 tttcaatcaa tctttacata aagggtttat agacaaagat atttctcata aaggtaatta
     2461 tacaccgaag cttttagtaa ataataaaaa tgaaaaagtt ctttcaacaa ttatagatga
     2521 acttcaaaaa tgtgaaacgt tctatttttc tgtagctttt ataacagaaa gcggtttagc
     2581 cagcttaaag gctcaactat tagatttaag caataagggt gttaaaggga aaatattaac
     2641 atctaattac ttagggttta atagtcctaa aatgtatgga gaattactta aattaaaaaa
     2701 tgtagaggta agattaaccg atattgctgg attccatgcc aaaggatata tttttgaaca
     2761 taaggattat agttctatgg taataggaag ctctaattta acatctaatg cgttaaaggt
     2821 taattatgag cataatgttt tactgtctac tatgaaaaat ggcgatttag ttgatagtgt
     2881 aaaaaatgaa tttgacttgt tatggcaaaa gagtatccca ctgactgagc aatggattaa
     2941 ttcatataaa gaatcatttg agtaccgttc cttagaaaaa ttagcggagg ttgaacaaac
     3001 tcaaatgctg ctagctgata aggtgaaaaa atcagtggaa attgtaccca atttaatgca
     3061 agcagaagca ttaaggtcat taaaagctat tagggataaa gccaaagata aggcgttaat
     3121 aatatctgca actggtacag gtaaaacgat tttatgtgca ttagatgtta gagaagtaaa
     3181 ccctaataaa tttttattta ttgttcataa tgaggggatt ttaaatagag ctaaggaaga
     3241 atttaaaaaa gtattaccta taaaaaatga tagtgatttt ggattgttga caggaaaaca
     3301 tagagatgtc gatgccaaat atttatttgc aaccattcaa acattatcta gagatgataa
     3361 ttttaagcaa tttgatgaaa atgaatttga ttatattgtt tttgatgaag cacatcgttc
     3421 tgctgcatct acttatcaac gagtatttaa ttacttcaaa cctaagttca tgctgggaat
     3481 gactgctaca ccagaaagat cagatgaatt aagtatattt gaactgtttg attataatat
     3541 tgcatatgaa ataaggttac aagcagcgtt agaaagtgat attttatgtc catttcatta
     3601 ttttggtgtg actgattatg tacatcaagg tattaaagaa gatgatgtaa ctaaactgag
     3661 atatttaact tctgatgaaa gagttaatta tattattcaa aagacagatt actatggata
     3721 ttcaggtgaa attttacaag gattaatttt tgtgagtagc aaaaaagaag cttatgattt
     3781 agcggataaa ctaagttcaa aagggattaa aagtgttgct ttaacaggag atgatagtgt
     3841 taattatcgc caaattgtaa tagaaaaatt aaaagaaggt aagattaact atattataac
     3901 tgtagatctt tttaacgaag gtattgatat tccagaagtc aatcaagttg taatgttgag
     3961 accaacagag tctagtatta tattcattca gcaacttggt agaggattaa gaaaaagtgc
     4021 aaataaagag tatgttactg taattgattt tattggtaat tataagacca attatttaat
     4081 tccgattgcg ctttctggag atcaatcgca aaataaagat aattataaga agtttttaac
     4141 gaataacgat tcgattaatg gagtatctac aattaatttt gaagaagttg ctaaaaaaca
     4201 gatttacaat tcattggatg cagtatcatt gaatcaaaat aaattaatat taaaagctta
     4261 tgaagaagtt gaaaatagat tgggacacat gccgttacta atggatttta tacaacaaca
     4321 ttctatagat ccaagcgtta tattttctaa atttagtaat tattacgagt ttttagtaag
     4381 gtataaaaaa atagatactt tattgacgga aaatgaatct aaaaatctgg ttttcttttc
     4441 aagacaaata gcacctggat tgaaaagaat cgatagttta gttttagaag aacttttaaa
     4501 aaatgaatta acatatgatg aattaaaaaa taaaatgttg aacgaagtta aggttataac
     4561 agaagatgat atagatactt cattaagaat tttagatttt tcattttaca acgcaggaat
     4621 tgaaaaaatc tatggaagtc ccattataga atgtaatgaa agaatgataa gactaagcga
     4681 tgcatttact aatgctctaa gtaatcaaac atttaaaata tttttagaag atcttattga
     4741 attatcaaag tataacaatg aaaaatacca aaaaggtaaa aatggactga ttttatataa
     4801 taaatattca agagaagatt ttagcaaaat atttaattgg aataaaaatg gttcgtctgt
     4861 aatcatggga tacatgataa gaagccaaga aatgccaata tttatcactt atgataagca
     4921 tgaggatata agtgatagca caaaatatga agatgaattt ttaagtcaag atgaattaaa
     4981 atggtttact aaatctaata gaacgctaaa atcaaaagaa gttcagaaaa ttttgtccca
     5041 tagagcaaaa ggaattaaaa tgtatatttt tgtacagaaa aaagatgatg atggtatata
     5101 tttttattat ttaggaactg ctggatatat agaaggttca gagaagcaag ataaaatgcc
     5161 gaatggttca aacgtagtaa ctatggattt agcactcgat aaagctgtaa gagatgatat
     5221 atatcgctat ataacaaatt aatgtaaacc gaaaaatgaa tgttagtaaa gatgtattta
     5281 aacatcactt ttaataagta aagacattga gtttcagtgt tattatttta agtataagcg
     5341 caatttatct taattaatta gttggttagg ccaataaaaa ttataaagat atttgcgctt
     5401 tttaaataat ttgtgatgtt gatatgtgaa aaatacaact aacaattaaa agccaagagg
     5461 atttaatcat aaaattccct ctagtattat taatattgga atttgaactt aactttgcat
     5521 caaaaataaa aatgggggtg tgaaatgatg attcattcaa aaaggttgag gctctggctg
     5581 tatttagtat tattagctgt ttttattagc gcgtgtaacg tgaaagaaga taaacaaatt
     5641 aaagaaaatt tcaacaaaac attgagttta tatccaacca agaatctcga tgatttttac
     5701 gataaggaag gttttcgaga tcaagagttt gataaaagag ataaagggac ttggattatt
     5761 aattctggaa tgaacatcca attaaaagga ggagctttaa aatccagaga gatggtactt
     5821 tacatcaatc gtaacactag aacagctaag ggatattttt taataagtga gacaacagaa
     5881 gacaaaaaag gatacgtcca taataaagat aaaaaatacc ctgtcaagat ggaacataat
     5941 caaattattc caacgaagcc cataagggat gataagttaa aaaaagagat tgaaaacttt
     6001 aagttctttg tacaatatgg ggattttaaa gattataaag atggggatat ttcatacaat
     6061 cctaacgtac caagttattc cgcaaactat caattgaata atgatgatta taatgtccaa
     6121 caattaagaa aacgatatga tatatcaacc aaaagggctc cggaattaaa attgagagga
     6181 tctggcgatt taaaaggctc atctgtaggt tctaaagaac tagaatttaa ctttataaga
     6241 aataaagaag gaaatgtgta tttttctgat agtattaatt tcaaacctac tgaatagggt
     6301 taatagaagt ttggaataaa attccataaa gtgttcaaaa taatttttcg ctttagttgt
     6361 aaatattaaa aactgagtca gtattaaaaa tataaggtgg agaaatgatg atgcattcaa
     6421 agaaattaat gctcggtata tgtttggtat tactcattat attgattgta ggttatgtca
     6481 ttatgacaaa aataaatagt cgaagcgccc aaattaaaga cacatttaat caaacattaa
     6541 aattatatcc aaccaaaaat ctcgatgatt tttacgataa ggaaggcttt cgagatcaag
     6601 aatttggcaa aggagacaaa ggtacttgga ttattaattc tggaatgaac atccaattaa
     6661 aaggaggagc cttaaaatcc agagagatgg tactttacat caatcgtaac actagaacaa
     6721 cgaaaggata ttttatagta ggtgagataa ctaaagataa aaaaggatat acacatgata
     6781 aagataaaaa ataccctgtc aagatggaac ataatcaaat aatcccaaca aaacctataa
     6841 aagacgagaa gttaaaaaaa gaaattgaag actttaagtt ttttgtacaa tatggcaact
     6901 ttaaagattt taaagattat aaaaatgggg atatttcata caatccaaac gtaccaagtt
     6961 attcggcaaa atatcaatta agtaatgacg attataatgt ccaacaatta agaaaaagat
     7021 atgatatacc gactaaaaaa gcaccagaac tattgttgaa aggtgatggc gatttaaaag
     7081 gttcatccat aggctctaaa gacttagaat ttatctttgt acaaaataaa agagagaata
     7141 tctattttac agattcggtt gaatttactc caagcgagga tgataaatcg tgagtcaaac
     7201 tgaataggga taatagaagt ttggaat
//
LOCUS       DAKPJH010000120         7209 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.120, whole genome shotgun sequence.
ACCESSION   DAKPJH010000120 DAKPJH010000000
VERSION     DAKPJH010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7209
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.120"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..679)
                     /locus_tag="OY092_002286"
     CDS             complement(<1..679)
                     /locus_tag="OY092_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001803819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 family protein"
                     /protein_id="HCX1077208.1"
                     /translation="MMKNESSKDTNTETKSVPEEMDASKYVGQGFQPSAEKDAIEFSK
                     KHKDKIAKRGEQFFMDNFGLKVKATNVIGSGDGVEVFVHCDDHDIVFNASIPFDKSII
                     DSDSSLRSKDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENA
                     IMKTQNSGFRNEYYYLTAIPYTLDEYKKYFQPLIKEDDKSFRDGMKNSKKQLKDKSRP
                     YIVTTLFS"
     gene            complement(1190..2098)
                     /locus_tag="OY092_002287"
     CDS             complement(1190..2098)
                     /locus_tag="OY092_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HCX1077209.1"
                     /translation="MLKKAKLILIATLLLSGCSAMESESKKDTKAETKSVPEEMEASK
                     YVGQGFQPPAEKDAIEFAKKHRKEFEKVGEQFFMDNFGLKVKATNVVGKDDGVEVYVH
                     CDDHGIVFNASLPLYKDAIHQKGSMRSNDNGNDMSMVVGTVLSGFEYRAQKEKYDNLY
                     KFFKENEKKYQYTGFTNEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIRKNDK
                     EFKEGMQRARKELNYTANTDVVSTLFSTKKNFTKDNTVDDVIELSNKLKDKPNMPQKS
                     QVTIQLGKSSINTKKPFYDDINPIEG"
     gene            complement(2173..2319)
                     /locus_tag="OY092_002288"
     CDS             complement(2173..2319)
                     /locus_tag="OY092_002288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077210.1"
                     /translation="MNIINDRDLTELSSYMVYQDINKDNNFTVNEKRFKQADEFEDLY
                     REKL"
     gene            complement(2303..3238)
                     /locus_tag="OY092_002289"
     CDS             complement(2303..3238)
                     /locus_tag="OY092_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000476882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HCX1077211.1"
                     /translation="MFKRTKLILIATILLSGCSAMESESKKDTNTETKSVPEEMEASK
                     YVGQGFQPPAEKDAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVH
                     CEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLY
                     KFFKENEKKYQYTGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDK
                     EFKEGMQKARKELNYTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKN
                     TITTQLGNKLIGTKKARFDDKKVVSFGAFEDEYNK"
     gene            complement(3329..3544)
                     /locus_tag="OY092_002290"
     CDS             complement(3329..3544)
                     /locus_tag="OY092_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077212.1"
                     /translation="MIYSPSHYDDMFILNTQAHARLDQMAQQFEVVCNGLNENEGQAI
                     QTMDQSASLIRSNLIQVKEQLEKLAVY"
     gene            complement(3723..4733)
                     /locus_tag="OY092_002291"
     CDS             complement(3723..4733)
                     /locus_tag="OY092_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCX1077213.1"
                     /translation="MKLSDREWKAFTTDELFSIKSGTTSDFSKLNLKNDSKLPCIGAK
                     YKNNGVVGFANNEELKVEGNALVFIKTGEGSVGLTLYKAEDFIPHKNVYIGYNVSLNK
                     YIGLFIATMYNKQKFIYNYGYGLNQLRVKRRKILLPSKNNSPDYEFMERYIKEKYFNL
                     KSHIKEKQKHKISDWRELDEVEWLPFSTSEVFNTIQRGKRLTKSNQIKGLTPYISSSG
                     INNGLDNFISNSEKIRVFDNCLTIANSGSVGSTFYHTYRFIASDHVTHLKNNNLNKFT
                     YLFIANMLRRLEGKYSFNREINDFRIKRERILLPTKNNQPDYEFMEQYMKRKENKILD
                     RL"
     gene            complement(4720..6624)
                     /locus_tag="OY092_002292"
     CDS             complement(4720..6624)
                     /locus_tag="OY092_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HCX1077214.1"
                     /translation="MNEKTGIDQFMRKEIESLGVSYDEQQSSNVEIAEALKTASKSLS
                     GKVGKPEFLFFSDEFLVVVEDKKDIHKHEMKSERGELILDSPEILKDYAVNGAVHYAR
                     HIIKHTNIVEKVFAVGASGDGHSNKISIHYVDSKSYKYISDINNLEDLKEENIEEFYR
                     VSVLGELPKEERELIEVNKIAADLHEDLRNYGSLEGEKKASVVSAILLALENEEVIFN
                     VDKLQGLQGEGVKDGEILFDAIDKYLRNKSLMPHAKIGELKDNFTFIQNDLTLNRSRE
                     DLKMTPLKYFTIKLSNKLKKNIKHSDMDILGNFYGEFVKYGGNDGNSLGIVLTPRHIT
                     NLMCELIDIDENDYVLDPCCGSGGFLIAAMNRMLGKTNDEIKKAEIKQNQLHGIELQQ
                     KLFTIATTNMILRGDGKSNLKRDDIFHVETGLYKNQITKALINPPYSQAKTKNLSHLS
                     EISFINETLSLMKKDAKLAAIVPQSTMIGKTNNDKNYKREILEKHSLETVITLNKDTF
                     YGVGVNPCIAIFTAGVPQDNKKRVNFVNFSDDGYIVRKHVGLVGDGTEKSKKEYLLNV
                     LNDYEDADTNFLVKSPITWKDEWLHSFFYYNEEIPTDEDFEKTIADYLSFEFDMKLHG
                     RGDLFDNETE"
     gene            complement(6985..>7209)
                     /locus_tag="OY092_002293"
     CDS             complement(6985..>7209)
                     /locus_tag="OY092_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077215.1"
                     /translation="KGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAVYAPGTLIYV
                     FEIIDGWCRIYWNNHNEWIWHERLIVKEVF"
BASE COUNT         2117 a         1337 c          893 g         2862 t
ORIGIN      
        1 tactaaataa agttgtaaca atatatggac gagatttatc tttaagttgt ttttttgagt
       61 ttttcatacc gtccctaaaa gacttatcat cctctttgat taagggttga aaatactttt
      121 tatattcatc taaagtatat ggaattgcag tcaaataata atactcattt ctaaaaccac
      181 tattctgcgt tttcataatt gcattttcag tataaccagt atatttatat ttacttttat
      241 attcttttaa aacttctgtt aaattatcca actcttcctt atgtgctcga tattcaaagc
      301 cactcaacac tgtaccaact aaagtactca tatcatcgcc tttatcctta cttcttaatg
      361 aactatcact gtcaataatt gatttatcaa atggaatact tgcattaaat acgatgtcgt
      421 ggtcatcaca atgcacgaat acttctacac cgtcgccact acctataaca tttgtagctt
      481 taacttttag accgaagtta tccataaaaa attgttcgcc tcgcttagca attttatctt
      541 tatgcttctt cgaaaattca atcgcatctt tttctgcaga tggttggaat ccttgtccta
      601 catattttga agcatccatt tcttctggta cagatttagt ttctgtattc gtgtctttac
      661 ttgattcatt tttcatcatg gaacatcctg atagtagaag tgttgctatt aatattaatt
      721 ttgcttttta agcatatatc atcacccatt tatgcgcttt taaaactctc attttgcaaa
      781 taattatact ctcttaattt atttacgtct tatagtttct ctctatataa atcttcaaat
      841 acatctactt gcgttaaaca atgtctgatt tttatttaat tatccgttga tttagcattt
      901 tgaagccaat catctccatt acctaaagat ttcaatgggt tattaggatt tactgcctca
      961 tttgaagttc cttgatagat tattatctgt tgacaagtta gattcccctg atcatcaaga
     1021 aactcgtata tttctatatt aaggtatgcc tttcatatta tgattttcta tttgtttgaa
     1081 ccgtttttca tttactttaa aatctatcat tcatttatat cttgataaac ccaataaccg
     1141 ttcaattctg ctatgtccct atcatttatt ttattcactt tatattcact tacccttcaa
     1201 ttggatttat atcgtcataa aatggttttt tagtatttat actagatttt cctaattgaa
     1261 tagtaacttg agatttttga ggcatattgg gtttatcttt taatttatta ctcaattcaa
     1321 tcacatcatc tactgtatta tctttagtaa agtttttctt agtagaaaaa agcgtagaaa
     1381 ctacatcagt atttgcagta taatttagct cttttctggc tcgttgcata ccttctttaa
     1441 attctttatc atttttacga atcaatggtt cataatattt acgatattct tttaagtttc
     1501 ttgataaata tgtaatataa aagtattcat tttgataccc gacgttttgt gtcttgttaa
     1561 ttgcctcgtt tgtaaatcct gtatattgat atttcttttc attctctttg aaaaatttat
     1621 ataaattgtc atacttttct ttttgcgctc gatattcaaa gccactaagc actgtaccca
     1681 ccaccatact catatcatta ccattgtcat tactacgcat tgatcctttt tgatggatgg
     1741 catctttgta caagggcaaa cttgcattaa atacaatgcc atgatcatcg caatgcacat
     1801 aaacttctac accatcatct ttacctacaa cattggtagc tttaactttt agaccgaagt
     1861 tgtccataaa aaattgttca cctacttttt caaattcttt acgatgcttc ttcgcaaatt
     1921 caatcgcatc tttttctgca ggtggttgga aaccttgacc tacatatttt gaagcttcca
     1981 tttcttctgg cacagatttt gtttctgctt ttgtgtcttt ttttgattca ctttccatcg
     2041 ctgaacatcc tgataacagt agcgttgcta ttaagattaa tttcgccttt ttaagcatat
     2101 ctcatcaccc atttatgcgc ttttaaaagt ttcattttgt aaataattat actctcttaa
     2161 tttatttgcg tcttatagtt tctctctata taaatcttca aattcatctg cctgcttaaa
     2221 tcgtttttcg ttaactgtaa agttattatc tttattgatg tcttgataaa ccatataact
     2281 actcaattct gttaaatctc tatcatttat tatattcatc ttcaaatgct ccaaacgaca
     2341 ctactttctt atcatcaaaa cgagcttttt ttgtgccaat aagtttattt cctaattgag
     2401 tagttatagt attcttgatt ggcatatctt ttgttctttc aattttctcg gataaatcta
     2461 ttacattatt tatcttttct tttctattcc tttcatcatt cgtactaaat aacgttgcta
     2521 cagtatttgt attagcagta tagtttagct cttttctagc tttttgcata ccttctttaa
     2581 attctttatc atttttatga atcaatggtt cgtaatattt acgatattct tttaagtttc
     2641 ttgataaata tgtaatataa aagtattcat tttgataccc gacgttttgc gtcttgttta
     2701 ttgcttcttt agtaaaacct gtatattgat atttcttttc attttcttta aaaaatttat
     2761 ataaattatc atacttttct ttttgcgctc gatattcaaa gccactcagc actgtaccca
     2821 ccatcatact catatcatca ccgttgtcat tactacgcat tgatcctttt tgatggatgg
     2881 catctttgta caaaggtaga cttgcattaa atacaatacc atgatcttca caatgcacat
     2941 aaacttctac accatcatct ttacctacaa catttgtagc tttaactttt agtccaaagt
     3001 tatctttaaa gaattgttca cctacttttt caaattcttt acgatgcttc ttcgcaaatt
     3061 caatcgcatc tttttctgca ggtggttgaa agccttgtcc tacatatttt gaagcttcca
     3121 tttcttctgg tactgatttt gtttctgtat tcgtgtcttt ttttgattca ctttccatcg
     3181 ctgaacatcc tgatagcagt attgttgcta ttaagattag ttttgtcctt ttaaacatag
     3241 ctcatcaccc atttatgtgt ttataaaact tttgtgtttg aaaaagctac ttattctcaa
     3301 tgaaaacaag tagcttttaa taaattaatt agtaaactgc tagtttttct aattgttctt
     3361 taacttgaat taagtttgaa cgaattaacg aggcagattg atccattgtt tgaatagctt
     3421 gtccttcatt ttcgttcaag ccattacaaa caacttcaaa ctgttgtgcc atttgatcaa
     3481 gacgagcatg agcttgtgtg tttaaaataa acatatcgtc ataatgtgat ggcgaataga
     3541 taattcgtcg ttgtatacaa acgtataaaa accttgtcat atcaacggtt ttggcatttt
     3601 taaacctctg tgttttccac gcatgtttgc ccttatttaa ataatttgcc cttttttcgc
     3661 cccgaaaaaa acacaaaaaa ataaccacac tcctaaatta ataggtggtg tggtttgatc
     3721 atttataatc tatctaatat cttattttct tttcgcttca tgtattgctc cataaattca
     3781 tagtcgggct gattgttttt agtggggagt aatatgcgtt ctcttttaat acgaaaatca
     3841 ttaatttcac gattaaaact atactttcct tctagtctac gtagcatatt agctataaat
     3901 aaataagtaa acttatttaa attattattt tttaagtgag taacgtgatc actagcaatg
     3961 aatctatacg tatgataaaa agtacttcct acacttccgc tgtttgctat tgttaaacaa
     4021 ttatcaaaaa ctctaatttt ttcgctattt gaaataaagt tatctaatcc gttattaata
     4081 ccactagagg atatgtaagg tgttaatcct tttatttgat tagatttagt taaccttttt
     4141 cctcgttgaa tagtattaaa aacttctgaa gttgagaagg gtagccactc aacctcatct
     4201 aactctcgcc aatcagaaat tttgtgtttt tgtttctctt ttatatgtga ttttagatta
     4261 aaatattttt ctttgatgta tcgttccatg aattcgtaat caggactatt atttttagaa
     4321 ggaagcaata ttttacgtct ttttactctt aattggttta gaccatagcc atagttatat
     4381 ataaatttct gtttattgta catagttgca ataaacaagc ctatatattt atttaagctt
     4441 acgttatagc ctatgtaaac atttttgtgc ggtataaaat cttctgcttt ataaagagtt
     4501 agtccaacag aaccttctcc agttttaata aaaactaaag cgtttccttc tactttcagt
     4561 tcttcattat tagcgaaacc taccacacca ttatttttat attttgcccc tatacacggt
     4621 aactttgaat cgttttttaa attcaatttt gaaaagtcag acgtagtccc agatttaata
     4681 ctgaataact catcagttgt aaacgccttc cattctctat cactcagttt cattatcgaa
     4741 taaatccccc ctgccgtgca gtttcatatc aaattcaaat gataagtaat cagctattgt
     4801 cttttcgaaa tcttcatctg taggaatttc ttcattgtag taaaagaagc tatgcaacca
     4861 ttcatccttc caagtaatag gggatttaac taaaaagtta gtatccgcat cttcataatc
     4921 atttaacacg tttaaaagat attctttttt tgatttctcg gtaccatctc caactaatcc
     4981 cacatgttta cgcactatat aaccatcatc agaaaagttt acaaagttaa cacgtttttt
     5041 gttgtcttgt ggaacacctg cagtgaaaat tgctatacac ggatttactc ccacgccata
     5101 aaaggtatct ttattaagcg taattactgt ttctaacgaa tgcttttcta gtatttcgcg
     5161 cttgtaattc ttatcattat tagttttacc aatcattgta ctctgtggaa cgatagcggc
     5221 taacttagcg tcctttttca ttagtgacaa cgtttcattg ataaaactaa tttctgataa
     5281 gtgacttaag tttttcgttt tagcttgtga atatgggggg ttaattaatg ccttagtaat
     5341 ttgattttta tatagacctg tttcaacatg gaatatgtca tcacgtttta gattactttt
     5401 accatcacca cgtaaaatca tatttgtagt tgctatagtg aataactttt gttgtaattc
     5461 aattccatgt aattgatttt gttttatttc agcttttttg atttcatcat ttgtttttcc
     5521 taacattcta ttcatggcag ctattaaaaa cccacctgaa ccacagcatg gatctaatac
     5581 ataatcattt tcatcaatat caattaattc gcacatcagg tttgtaatat gtctaggtgt
     5641 taagactatg cctaatgaat taccatcatt tcctccatat tttacaaact caccataaaa
     5701 attacctagt atatccatat cagaatgttt gatatttttc tttaatttat tacttagctt
     5761 gatagtaaaa tattttaatg gtgtcatctt taagtcttct cttgatctat ttaacgtcaa
     5821 atcgttctgt ataaaagtga agttatcttt taattcacca attttagcat gaggcattaa
     5881 acttttattt cttaaatatt tatcaatagc atcaaagagg atttcgccat ctttaacacc
     5941 ctcaccttga agtccttgta gtttatccac attaaaaatc acttcttcat tttctaaagc
     6001 tagtaaaatt gcggacacta cagaagcttt cttttcacct tcaagcgaac catagttcct
     6061 taagtcctcg tgcaaatcgg cagcaatttt attaacttct attaactctc tttcttcttt
     6121 aggcaactct cctaacacag aaacacgata aaattcttca atgttttctt ctttcaaatc
     6181 ctctaagttg tttatatctg aaatatattt atagcttttg ctatctacat aatgtatgct
     6241 aattttattc gaatgcccat cacctgatgc gccaaccgca aaaacctttt caactatatt
     6301 tgtatgttta ataatgtgcc gcgcataatg cactgcgcca tttacagcat aatctttcaa
     6361 tatttctggt gaatctagta ttagttcacc tcgttcagac ttcatttcat gcttatgtat
     6421 atctttttta tcctcaacaa cgactaaaaa ttcatcgcta aaaaataaaa attctggttt
     6481 acctactttt ccgcttaaac ttttacttgc tgtttttagc gcttccgcta tttcaacatt
     6541 gctgctttgt tgttcatcgt aacttacgcc taaactttcg atttcttttc tcataaattg
     6601 gtctatacca gttttttcgt tcatatatat tacctcattt tatcacatgt atagcattat
     6661 tatagcattt ataacggttt ttaaacatat aaaaaaccac ccagtaacta gtatgagtgg
     6721 tgtagcgact gtaacaactc tatgttatca agatatatgt atcgagtgat gacaaggaag
     6781 atgtctcctg tgggaccaac agtcagatac atggcctctg cccggctata tagttcactc
     6841 ctactatata aaagtaagta taacataaaa aaaataggca agtaccgaag tacctgcctg
     6901 ttatgcacat ttaaatcttg agagtaatgt tatctaaaga ataatgttat tatatcacaa
     6961 tacaacattt aagcaaacat tatattaaaa cacttctttc acaatcaatc tctcatgcca
     7021 tatccactca ttatgattgt tccaataaat gcgacaccaa ccatctataa tttcaaacac
     7081 atatattaat gttccaggcg cgtatacagc ctgtccaaca tcgaatctat agttagtacg
     7141 attatcaccg tatctagtgg ctgaagtagc acctaagccg tcgattttcg cattaaaata
     7201 agcaccttt
//
LOCUS       DAKPJH010000121         7017 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.121, whole genome shotgun sequence.
ACCESSION   DAKPJH010000121 DAKPJH010000000
VERSION     DAKPJH010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7017
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.121"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            189..1547
                     /locus_tag="OY092_002294"
     CDS             189..1547
                     /locus_tag="OY092_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HCX1077216.1"
                     /translation="MAMNEIALFKGIRIQPYQKYIDFMFAGALAFIFLVYRIYILFID
                     YKSVNKKLDILTLFAYFKPHLLYLLIGTAIIFVICKLIAQFLIRFKTKDLAEMIETQG
                     FHNRTVIKKTTEYIPIDYKQTEYDYYPTMFYKRGKKSFVIHIKKDGSRFQDNYLELET
                     IIEPMFNSELVEKKHIGRYLRYEFMPLKYKKRIVMNGEQESNTIFYDTKIAITHQITW
                     DFVKAPHGLVTGITGGGKTYFLFYVIRELFRRHSEVRLLDPKVSDLSFMKRVIGDDKV
                     ADTKGQILKQLREANNEMEERFRLMNDSSDYKIGNDFRNFDMRPYFIIFDEVTAFTST
                     LDKKELQEMNDYLINIIMKGRQAGVFMFLTAQRPDADVIKGNVRDQLGLRVSLGNLSN
                     DGYRMTFGQTDKEFQTIHDSDIGRGYISILGQYNEPILFDAPLMEQYDFVEDVKQILN
                     KE"
     gene            1552..3399
                     /locus_tag="OY092_002295"
     CDS             1552..3399
                     /locus_tag="OY092_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000681156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077217.1"
                     /translation="MKHKSVYLLCFLILPILLLTSVSAYAVSNPVGEPSHAVKPKIEK
                     YDLSHYRSIYSEKGDWNPFGQEEISRQINNVSDFFFSMTKILAGVTDYAIENLFQLDV
                     INDFADKIGDFVGDIYQKLLSNLALTLFIIVCFNAFIIFSVQGNAREALKRAFLIMCL
                     IGFGVGILANAGNIIRGTNNIGKDLNNIIMNSTSSIDGNIDYIHENSGMNHIRNQLFD
                     MTIYRTYLVMNYGTVDEKEIKAKGKDRIDNILKLDYDKKSEKELDDIVKDEVEKKNNK
                     YMTQGYVFQKLAISVIGFIITLFMSIVFLSISFAKLIFSTFALFLFLFLVFSWIVSFI
                     PGFELSVFSAFAKTLGYIILSACMTFLFVIVGLCIKLANSFIEPDSQNAYFLNSIFII
                     VILFVMYKKRAQIINFVSRGNISFSPSAIGAGVMNRTQERFNKIRHEQAQNKKAKREN
                     QRDEPAPPLQNDNDLRRRQQDKPMPLFINKDNQKNGNKRREQQESMNGNDVKSASVES
                     NANNYSKQPQKASQQEHQVRETRQRKDIQRSPQVVNQPLNNENHSINRKEQKSVQTAY
                     DTDVQKRQIQNATQNQQSRQSGNRNQPITRNYQSKDRLKEQKDINKHGK"
     gene            3389..4435
                     /locus_tag="OY092_002296"
     CDS             3389..4435
                     /locus_tag="OY092_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000247473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077218.1"
                     /translation="MVNKKDIAKKVIGKTPIGVKLKLAKVIIILCVVAFFIFPVIIMF
                     LLAPDLNKGKDDAGCTVSGGNVSANGIDKFNENAKGGKLEGKGKEIQKIAEKNKVPVN
                     IFMAIIASESQWGKGENATRQNNPLSVMGSKSIHDSTYPTIEDGLNAGAKNLYDVYIS
                     KGLDTPKKIGPKYAPVGASNDPNNMNARWIPTVEKIMKDLGGSEAKTSCSNGKGKSIK
                     FNGKLPHWSNDDPGKGNLYTAGQCTWYAYGMRQKMGKPVSTYWHDAHKWNDRAKAEGY
                     KVDKNPEPGALFIAEQGAGGHDGHYGHVAVVIGVSDGGKTFRITEMNWEGAFKVNERT
                     LKMTDGYSFIHDKE"
     gene            4442..5032
                     /locus_tag="OY092_002297"
     CDS             4442..5032
                     /locus_tag="OY092_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000810447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077219.1"
                     /translation="MKQKIIMFTLVTIILFCAVLIGYQIPKQQVKMKQNQIEDLQEEQ
                     RILRDKNGELNKLVKRQSKTVISDEEKQIREVSSNFVKQMFEMKKDSSFKSKAPQIKP
                     LVTKDYYDTLFKDSKDKYDLYDDITVNDIHVYFDTYDPKKDSYKVFVQFDERIETDGD
                     DKIEHRQTSAQLDLVRTAEGWRIDNLKRFNLKPLGR"
     gene            5088..5444
                     /locus_tag="OY092_002298"
     CDS             5088..5444
                     /locus_tag="OY092_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystatin-like fold lipoprotein"
                     /protein_id="HCX1077220.1"
                     /translation="MRRWFVLILGLVILLSACGQKYDKEIDEVTKLEKESIQDVKNTK
                     KYKNVERSKSYYKIYNDGEVIIMTYMPFKDSNTKVSRVYKINQTSDKYEEDSNIDAEK
                     FEKDNKPVYEENNMKK"
     gene            5553..6056
                     /locus_tag="OY092_002299"
     CDS             5553..6056
                     /locus_tag="OY092_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000746376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1077221.1"
                     /translation="MKKRKKRKELDYKTRLAIAKYLNDGLNIIQISKILGRDDAVLYR
                     EVNKRSVDGVYNPLLAEEDAIKSRSISDEQVAKRRRLNDETKAYIEEKLSLKWSPRQI
                     ASQIEKDTGYYISYPTIYRYIRNGLVKVDVKRDMRQAGKKYNKSSEKRGKLDVGSRVI
                     KYRLKKY"
     gene            6037..6573
                     /locus_tag="OY092_002300"
     CDS             6037..6573
                     /locus_tag="OY092_002300"
                     /inference="COORDINATES: protein motif:HMM:NF033563.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HCX1077222.1"
                     /translation="MGSKSINNREEFGHYEIDTVWSVRPSTYCLLTIIERKTRYLYAS
                     RLNTRKSNVVCNEIINIMKPLLPKSITMDRGKEFALFEQIEDELNCSIYFSDLGCPYQ
                     RGSIENANGLLRQYYPKGTDFANITQKSLDEAVKQINARPRMIFDYKSSEEMLKYHVS
                     TQNCEPILNDCVRHEPVN"
     gene            6794..7017
                     /locus_tag="OY092_002301"
                     /pseudo
     CDS             6794..7017
                     /locus_tag="OY092_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001558444.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2595 a          792 c         1274 g         2356 t
ORIGIN      
        1 agaaagcttt ttattatgat gtttttattt attgtatcaa taattctttt attttttgca
       61 catcgatgtt ttgagaaaag tattactgat tataataaaa atatggaaga acaattggaa
      121 aattaatatt ttgttttaag catgcacatt atttgtgtat gctttttatt tttaaaggag
      181 tgcatataat ggcaatgaat gaaattgctt tatttaaagg tatacgtata cagccttatc
      241 agaagtatat tgattttatg tttgcaggtg cattagcatt tatttttttg gtatatcgta
      301 tatacatttt gtttattgat tataaatcag ttaataaaaa attggatata ttgacgttgt
      361 ttgcatattt taaaccgcat ttattgtatt tattgattgg tacagcaatt atatttgtga
      421 tatgtaagct tattgctcag tttttaatac gttttaaaac aaaagatttg gctgaaatga
      481 ttgaaacaca agggtttcat aatcgtacag taatcaagaa aacaactgag tatatcccta
      541 ttgattataa acaaactgaa tatgattatt atccaacaat gttttataag cgtggtaaaa
      601 aatcttttgt tattcatatt aagaaagacg gttcgaggtt tcaagataat tatttagagt
      661 tagagacgat tattgaacca atgtttaatt ctgaattagt agaaaaaaag catattggtc
      721 gttatttgag atatgaattt atgccactta aatataaaaa gcgtattgtt atgaatggcg
      781 aacaagaatc aaatacaatt ttttatgata caaaaattgc tattacgcat caaattactt
      841 gggattttgt gaaagcacct catggattgg ttacaggtat aaccggaggt ggtaaaacat
      901 attttttatt ttatgtgatt cgtgagttat tccgtagaca ttcagaagta cgtttattag
      961 acccaaaagt ttcagatttg agctttatga agcgcgttat tggtgatgat aaagttgcag
     1021 atactaaagg ccaaatatta aaacaattga gagaagctaa taatgaaatg gaagagcgtt
     1081 ttagattaat gaatgatagt tcggattata aaatcgggaa tgatttccgt aattttgata
     1141 tgcgccccta tttcattatt tttgatgagg taacggcttt tacttcaact ttagataaaa
     1201 aagaattaca agaaatgaat gattatttaa ttaatattat tatgaaaggt cgtcaagctg
     1261 gtgtatttat gtttttaaca gcacaaagac cagatgcaga tgtgattaaa ggtaatgtgc
     1321 gtgaccaatt agggttacgt gtgtctttag gtaatttgtc aaatgatggt tatcgtatga
     1381 cctttggtca aactgataaa gaatttcaaa cgattcatga tagtgatatc ggccgaggtt
     1441 atatttctat acttggacaa tataatgaac caattttatt tgatgcacct ttaatggaac
     1501 agtatgattt tgtagaagat gtgaaacaaa tattaaataa ggagtgattt gatgaagcat
     1561 aaaagtgtgt atcttttatg ctttttaatt ttgcctattc tgcttttaac atctgtgagt
     1621 gcttacgctg tttctaatcc agttggagag ccctcacatg cagttaagcc aaaaattgaa
     1681 aagtatgatt tatcacatta tcgttcaata tatagtgaaa aaggcgactg gaatccgttt
     1741 ggtcaagaag aaatttcacg acaaattaat aatgtgtcag attttttctt ttctatgact
     1801 aagattttag caggtgttac agattatgcg attgaaaatt tatttcaact agatgttatt
     1861 aatgattttg cggataaaat cggcgatttt gttggcgata tatatcaaaa gttattgagt
     1921 aatttagcat taacattatt tattattgtt tgctttaacg catttattat ttttagtgta
     1981 caaggtaatg caagagaagc attaaaacga gcgtttttaa ttatgtgttt aattggtttt
     2041 ggtgttggta tacttgcgaa tgcaggtaat attatacgtg gtacaaacaa tattggtaag
     2101 gacttaaata atataattat gaatagtaca tcttctattg atggtaatat tgattatatt
     2161 catgagaatt caggtatgaa tcatatacgt aatcaattat ttgatatgac gatatataga
     2221 acatatttag taatgaatta tggaactgtc gacgaaaaag agataaaagc aaaaggtaaa
     2281 gaccgtattg ataacatttt aaaacttgat tatgataaaa aatcagaaaa agaattagat
     2341 gatattgtta aagatgaggt tgaaaagaaa aataataaat atatgacgca aggttatgta
     2401 tttcaaaagt tggctatttc agtgattggt tttattatta cactttttat gtcgatagta
     2461 tttttatcaa taagttttgc gaagttgatt ttttctacat ttgctttatt tttattctta
     2521 tttttagtat tcagttggat agtgagtttt ataccaggat ttgaattatc tgttttctct
     2581 gcgtttgcaa aaacgttagg ctatattatt ttaagtgctt gtatgacatt cttatttgtg
     2641 atagttggtt tgtgtatcaa gcttgcaaat agttttattg aaccggatag tcaaaatgct
     2701 tattttttaa attcaatatt tataattgta atattgtttg taatgtataa aaaacgggct
     2761 caaattatca attttgtaag tcgtggtaat attagttttt ctcctagtgc aattggtgct
     2821 ggtgtgatga atcgaacaca agaacgtttt aataagattc gtcatgaaca agcgcaaaat
     2881 aagaaagcta aacgagaaaa tcaaagagat gaacccgccc caccacttca aaatgataat
     2941 gatttaagaa gaagacaaca ggataaacca atgcctttat ttataaataa agataatcaa
     3001 aaaaatggta ataagcgcag agaacaacaa gagtcaatga atggtaacga tgtaaaatct
     3061 gcttctgttg aatcaaatgc aaataattat tctaaacaac cacaaaaagc atcacagcaa
     3121 gaacatcaag tacgagaaac aagacagcga aaagatatac aaaggtcgcc acaagtggtt
     3181 aatcagccat taaataatga gaatcattca ataaatcgta aagaacagaa gtcagttcaa
     3241 actgcttatg atactgatgt tcaaaaacga caaatacaaa atgcgacaca gaatcaacaa
     3301 agtagacaat ctggaaatcg taatcaacct attacgcgta attatcagtc aaaagaccgt
     3361 ttaaaagagc aaaaggatat caataagcat ggtaaataaa aaagatattg ctaaaaaagt
     3421 aataggtaaa acgccaatag gcgttaaatt gaaattagcg aaagtcatca tcattttatg
     3481 tgtggtggct ttttttatat ttccagtaat tataatgttt ttgttagcgc ctgatttaaa
     3541 taaaggtaaa gatgatgctg gttgtactgt tagtggcggt aatgtttcgg caaatggtat
     3601 tgataagttt aacgaaaatg ctaaaggtgg aaaattagag ggtaaaggaa aagaaataca
     3661 gaaaattgca gaaaaaaata aagtacctgt gaatattttt atggccatta ttgcgagtga
     3721 atcacaatgg ggtaaaggag aaaatgcgac aagacaaaat aatcctttgt ctgttatggg
     3781 ttcaaaatcg attcatgatt caacatatcc aactattgaa gatggtctta atgcgggagc
     3841 taaaaatttg tatgatgttt atatttctaa aggtttagat actcctaaaa aaataggtcc
     3901 caaatatgcg cctgttggtg cgtcaaatga ccctaataat atgaatgccc gttggatacc
     3961 aacagttgaa aaaattatga aagatttagg cggttcagaa gctaaaacgt catgtagtaa
     4021 tggtaaagga aagtctataa agtttaatgg taaattgcca cattggtcaa atgatgaccc
     4081 tggaaaaggt aatttataca ctgctggtca atgtacttgg tatgcatacg gtatgcgtca
     4141 aaaaatgggt aaacctgtat cgacttattg gcatgatgca cataaatgga atgatagagc
     4201 taaagctgag ggttataaag ttgataaaaa tccggaacct ggtgcattat ttattgctga
     4261 acaaggtgca ggcggtcatg atgggcatta tggtcatgtg gctgttgtta ttggtgtaag
     4321 tgatggtggt aaaacattta gaataacaga aatgaattgg gaaggtgctt ttaaagttaa
     4381 tgaacgtaca ttgaaaatga ctgacggata tagttttatt catgataagg agtgaaaata
     4441 aatgaagcaa aaaattatta tgtttactct tgtaacaata atattatttt gtgctgtttt
     4501 aattggttat cagattccta aacaacaagt taaaatgaaa caaaatcaaa ttgaagattt
     4561 gcaggaagaa caacgtatat taagagataa aaatggagag ttaaataaat tagtaaagag
     4621 acaatcaaaa acagttattt ctgatgaaga aaaacaaata cgtgaagttt cttcaaattt
     4681 tgttaaacag atgtttgaaa tgaaaaaaga ttcttctttt aaatcaaaag caccacaaat
     4741 aaagccttta gttacaaagg attattacga tacattattt aaggattcta aagataaata
     4801 tgatttatat gatgatataa cggttaatga tattcatgtt tattttgata cgtatgaccc
     4861 taaaaaagat agttataaag tttttgttca gttcgacgaa cgtattgaaa cagatggaga
     4921 tgataaaatt gaacatcgtc aaacatctgc acaattggat ttagttcgta cagctgaagg
     4981 ttggcgtatt gataatttaa aacgtttcaa tttaaaacct ctaggacgtt agtttgtttc
     5041 aagacgatag caatgatata atttacgtaa aaaggagtga atttatcatg aggcgatggt
     5101 ttgtattaat tttaggatta gttatattat tatctgcatg tggtcagaaa tatgataaag
     5161 aaattgatga agttacaaag ttagaaaaag aaagtattca agatgtgaaa aatacaaaga
     5221 agtataaaaa tgttgagcgg tcaaaaagtt attataagat ttataatgat ggtgaggtta
     5281 ttataatgac ttatatgcct tttaaagata gtaatacaaa agtttcaaga gtatataaaa
     5341 taaatcagac tagcgataaa tatgaagaag attctaatat tgatgctgaa aagtttgaga
     5401 aagataataa accagtttat gaagaaaata atatgaaaaa ataaagaatc aactccctat
     5461 acgctttagc ggtggtatcg ggagttgatg aacatatatc ctcttataac ttattttata
     5521 aataaccttt ttaaaagtaa aggaggatat acatgaaaaa aagaaaaaaa cgtaaagaat
     5581 tagactataa aacacgtcta gctatcgcaa agtatttaaa tgatggttta aacatcattc
     5641 agatttctaa gattttaggt cgtgatgatg cagttctcta tagagaagta aataagcgtt
     5701 ctgttgatgg tgtttataat cctttattgg ctgaagaaga tgctataaaa tcgcgtagta
     5761 tttcagatga acaggttgct aaacgtagac gtttgaatga tgaaacaaaa gcatatattg
     5821 aagaaaaact ttcattaaaa tggtctccta gacagatagc aagtcaaatt gaaaaagata
     5881 cagggtatta tataagttat cctactatat atagatatat tcgcaatgga ttggtaaaag
     5941 ttgatgttaa acgtgatatg agacaagcag gcaagaaata taataagtct tctgaaaagc
     6001 gtggcaaatt agacgtaggg tctcgtgtta taaagtatcg gctcaaaaag tattaataat
     6061 cgtgaagaat ttggacatta tgaaattgat actgtttgga gtgttagacc atcaacatat
     6121 tgcttgttaa ctattattga aagaaagaca agatatttat atgctagtag attaaataca
     6181 cgtaaatcca atgtagtttg taatgagatt ataaatatta tgaaaccatt attacccaaa
     6241 agtataacta tggatagagg taaggagttt gctctatttg aacaaataga agatgaattg
     6301 aattgtagta tttattttag tgatttgggt tgtccatatc aacgtggttc tattgaaaat
     6361 gcaaatggac ttttaagaca gtattatcct aaaggtacgg attttgcaaa tataacacaa
     6421 aagtcattag atgaagctgt taaacaaatt aatgcacggc ctcgaatgat atttgactat
     6481 aaatcgagtg aggaaatgct aaagtaccat gtaagcacac aaaattgtga acctatatta
     6541 aatgactgtg tgaggcacga acccgtcaat taatataggt taatctaagc gaatggttta
     6601 caatgagcgc ggaaggacag gacgaataaa ttttgtatat aaaatgcata atctaaaaag
     6661 aagcatacta tttaaatatg tggtttttga tagatattac tagtaaaatg cttctttttc
     6721 ttcttctgta ctcttttagt aatatttatt aaaaaaattt aagaaattct catttttcta
     6781 ttgacacact gccttaaaag aaagaaaacc agttgtcaga tgtttaccat taattatatc
     6841 ttgtttaaaa ttaatattaa ttctactatt tttactttca atacttttgg tcatatatca
     6901 aactcaatct gcacaaatct tatttgtttt tatagatttt ctaaattttg tcgcgttaat
     6961 tttagtttat ttatgtacta atcctaataa tagaagtatt gataaaatag catgtgt
//
LOCUS       DAKPJH010000122         6988 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.122, whole genome shotgun sequence.
ACCESSION   DAKPJH010000122 DAKPJH010000000
VERSION     DAKPJH010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6988
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.122"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            29..1735
                     /gene="acsA"
                     /locus_tag="OY092_002302"
     CDS             29..1735
                     /gene="acsA"
                     /locus_tag="OY092_002302"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HCX1077223.1"
                     /translation="MKVEVYKGAQGKHNLKDYEETYNTFNWKDVEQAFSWSETGKMNM
                     AYECIDRHVDQGIGDKIALNYKDEHRKESYTYKDMQRLSNKAANVLSEHAEVDKGDRV
                     FIFMSRTPELYFALLGVLKIGAIVGPLFEAFMEKAVVDRLENSEAKVLITNKALLPRV
                     PVDKLPNLKKIVVVDEDVEDNYIDFISLMETASDEFDIEWLKSDDGLILHYTSGSTGQ
                     PKGVLHVQQAMLVHYISGKYVLDLQEDDVYWCTADPGWVTGTSYGIFAPWLNGATNCI
                     AGGRFSPEQWYSMIEDFKVTIWYTAPTALRMLMSAGDDIVEKYDLSSLRSILSVGEPL
                     NPEVIKWAKKVYGLTVLDTWWMTETGGHMIVNYPTMDVKLGSMGKPLPGIQAAIIDDA
                     GNELPPNRMGNLAIKKGWPSMMYRIWKNPEKYKSYFIGDWYVSGDSAYKDEDGYFWFQ
                     GRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGIIGKPDPVRGEIIKAFVALRKGYEP
                     TDELKEEIRLFVKEGLSAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELNLDAGDLST
                     ME"
     gene            2175..3842
                     /locus_tag="OY092_002303"
     CDS             2175..3842
                     /locus_tag="OY092_002303"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HCX1077224.1"
                     /translation="MTHLSDLDIANQSTLQPIKDIAASVGISEDALEPYGHYKAKIDI
                     NKITPRENKGRVVLVTAMSPTPAGEGKSTVTVGLADAFHELNKNVMVALREPALGPTF
                     GIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNELGIDQRR
                     IEWKRVLDMNDRALRHVNVGLGGPTNGVPREDGFNITVASEIMAILCLSRSIKDLKDK
                     ISRITIGYTRNRKPVTVADLKVQGALAMILKDAIKPNLVQSIEGTPALVHGGPFANIA
                     HGCNSILATETARDLADIVVTEAGFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRAL
                     KMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIKKFGVEPVVAINAFIHDTDAEVEYV
                     KSWAKENNVRIALTEVWEKGGKGGVDLANEVLEVIDQPNSFKPLYELELPLEQKIEKI
                     VTEIYGGSKVTFSSKAHKQLKQFKENGWDNYPVCMAKTQYSFSDDQTLLGAPSGFEIT
                     IRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDDGHAIGLF"
     gene            complement(4087..4176)
                     /locus_tag="OY092_002304"
     CDS             complement(4087..4176)
                     /locus_tag="OY092_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077225.1"
                     /translation="MLLTTPIRLYLIDNNYQYQLLVLIVAHPN"
     gene            4175..6862
                     /gene="harA"
                     /locus_tag="OY092_002305"
     CDS             4175..6862
                     /gene="harA"
                     /locus_tag="OY092_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haptoglobin-binding heme uptake protein HarA"
                     /protein_id="HCX1077226.1"
                     /translation="MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENT
                     NTSDKISENQNNNATTTQPPKDTNQTQPATQPANTAKNYPAADESLKDAIKDPALENK
                     EHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE
                     VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLV
                     FAKPIYNDPSLVKSDKNDAVVTNDQSSSDASNQTNTNTSNQNTSTTNNTSDQPYATTN
                     MSQPAQPVSSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAI
                     KNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKT
                     ASTWKKFEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHED
                     YDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKY
                     KAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEENSESVMD
                     GFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIP
                     DKAVYNAIVKVVVANIGYEGQYHVRIINQDIKTKDDATSQNNTSEPLNVQTGQEGKVA
                     DTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNIDKDVQHDVDHLSDMSDNNHF
                     DKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDSNKNKDKVIQLNHIADKNN
                     HTGKAAKLDVVKQNYNNTDKVTDKKTTEHLPNDIHKTVDKTVKTKEKAGTPSKENKLS
                     QSKMLPKTGETTSSQSWWGLYALLGMLALFIPKFRKESK"
BASE COUNT         2617 a         1006 c         1375 g         1990 t
ORIGIN      
        1 ttttcacata acaaaggggg agtttcaaat gaaagtcgaa gtttataaag gagcgcaagg
       61 caaacataac cttaaagatt atgaagaaac atataatact tttaattgga aagacgtaga
      121 acaagcattt tcttggagtg aaactggaaa aatgaacatg gcatatgaat gtatagatcg
      181 ccatgtagat caaggaatag gggataaaat agcattaaat tacaaagatg agcacagaaa
      241 agaatcgtat acttataagg atatgcaacg gttatctaat aaagcagcga atgttttgtc
      301 tgaacatgca gaagttgaca aaggtgacag agtatttata tttatgtcgc gtacacctga
      361 actatatttt gcgttgttag gtgttttaaa aattggtgca attgttggtc cgttatttga
      421 agcatttatg gaaaaggcag ttgtggatag attagagaac agtgaagcta aagtgttaat
      481 tactaataag gcattgttac ctcgagtacc tgtagataaa ttaccgaact tgaaaaaaat
      541 tgttgtcgta gatgaggatg tagaagacaa ttacatagac ttcattagtt tgatggaaac
      601 tgctagcgat gaatttgaca ttgaatggtt aaagtcggat gatggtttga ttttacatta
      661 tacatcaggt tctactgggc aacctaaagg tgtattgcat gttcaacaag cgatgttagt
      721 gcactatatt tctggaaaat atgtattaga tttacaagaa gatgatgttt attggtgtac
      781 agcagatcca ggttgggtta caggaacatc ttatggtatt tttgcaccat ggttaaatgg
      841 cgctacaaat tgtatagctg gtggtcgctt ttcaccagaa cagtggtata gtatgattga
      901 agattttaaa gtgacgattt ggtatacggc accaacagct ttaagaatgt taatgagtgc
      961 tggtgacgat attgttgaga aatatgactt gtcatcgtta cgttcgattc tgtcagtagg
     1021 tgagccttta aatcctgaag ttataaaatg ggcgaaaaaa gtatacggtt taacggtgtt
     1081 agatacttgg tggatgacag aaacaggtgg acatatgatt gttaactatc caacgatgga
     1141 cgttaagctt ggctcaatgg gcaaaccatt acctggtatt caagctgcaa ttatcgatga
     1201 tgcaggtaat gaattaccac caaatcgaat gggcaatctt gctataaaaa aaggctggcc
     1261 atcaatgatg tatcgtatct ggaagaatcc agaaaaatat aagtcgtatt ttattggaga
     1321 ctggtatgta tctggtgact cggcatataa agatgaagat ggttatttct ggttccaagg
     1381 acgtgttgat gatgtaatta tgacagctgg cgaacgagtt ggaccatttg aggttgagtc
     1441 taaattggtt gaacacgaag cagttgccga agcaggaatt attggtaaac ctgatccggt
     1501 tcgcggtgaa ataattaagg cgtttgttgc actgaggaaa ggatatgaac caacagacga
     1561 attaaaagaa gaaattcgtt tatttgttaa agaaggtttg tcggcgcatg cagcaccacg
     1621 tgaaatcgaa tttaaagata aattacctaa aacacgttca ggtaaaatta tgagacgtgt
     1681 attaaaagct tgggaattaa atttagatgc aggggattta agtacaatgg aataatgaca
     1741 tgaatgttat agaagatttc tttctaagaa taaagggtga caacatattt catgtcaatg
     1801 tttaaatatt agtttacttt atgataagca atataaagag ctattaactt gtgtcatatc
     1861 atttcgtaga atgcatttga aaatgatgac ataacaataa tggcatatct ttatattgct
     1921 tcttattttt aatatgatct ttggaagatg actattttaa ataatagaaa aatatagtta
     1981 tcaatagtat caagcgctaa aagttgtata atacaaaact ttaataagtg aatttattgc
     2041 aaaaatgaaa gcgctaaccc gatttagtcg acaagttttt aacagttcgt tattatatga
     2101 atgtaagtaa aaatttctta gctacaactt acatattata aatgcataaa ttaaacaaaa
     2161 aggggcgaaa aaagttgact catttatcag atttagatat tgcgaatcaa tcaacactac
     2221 aaccaattaa ggatattgct gcatcagtag gtatttcaga ggatgcatta gaaccttatg
     2281 gtcattacaa agctaaaatc gacattaata aaattacgcc aagagaaaac aaagggagag
     2341 ttgttttagt aactgcgatg agcccaacac cagctggtga aggtaaatca acggttacag
     2401 ttggtttagc tgatgcattc catgagttaa ataaaaacgt tatggttgca ttaagagagc
     2461 ctgctttagg accaacattt ggtatcaaag gtggtgcgac tggtggtggt tatgcgcaag
     2521 tcttacctat ggaagatatc aacttacatt tcaacggaga tttccatgcg attacaactg
     2581 caaataatgc attgtctgcg tttatcgata atcatattca ccaaggtaat gaattaggaa
     2641 tcgatcaaag acgtattgaa tggaaacgtg tattagatat gaatgatcgt gcacttagac
     2701 atgtaaacgt tgggttaggt ggacctacaa atggtgtacc acgtgaagat ggctttaata
     2761 ttacagtagc gtctgaaatt atggcgattt tatgtttaag tagaagtatt aaagacttaa
     2821 aagataaaat tagtcgtatt actattggtt acactagaaa tcgcaagcca gttacagttg
     2881 cagatttaaa agtgcaaggt gcacttgcaa tgattttaaa agatgcaatt aaaccaaact
     2941 tagtacaatc aattgaaggg acaccagcat tagttcatgg tggaccattt gcgaatatcg
     3001 cacacggttg taactcaatt ttagcaactg aaacagcacg tgatttagct gatatcgttg
     3061 taacggaagc tggatttggt tcagacttag gcgctgaaaa attcatggat attaaagcgc
     3121 gtgaagcagg atttgatccg gcagctgtcg ttgttgttgc gacaattcgt gcattaaaaa
     3181 tgcatggtgg tgtagcgaaa gataatttaa aagaagaaaa tgtagaagca gtaaaagcag
     3241 gaattgttaa tttagagcgt catgttaata atattaaaaa attcggtgta gaaccggttg
     3301 ttgcaattaa tgcatttata catgataccg atgcagaagt agaatatgta aaatcttggg
     3361 ctaaagaaaa taacgtacga attgccttaa ctgaagtttg ggaaaaaggt ggtaaaggtg
     3421 gcgttgactt agcaaatgaa gtattagaag tcattgatca acctaattca tttaaacctt
     3481 tatatgaatt agaattacca ttagagcaaa agattgaaaa gattgtgact gaaatctatg
     3541 gcggttcaaa agtaacgttt agcagtaaag cgcataaaca attaaaacaa tttaaagaaa
     3601 atggttggga taattaccca gtatgtatgg cgaaaacaca atattcattc tcagatgatc
     3661 aaacgttgtt aggtgcacca tcaggatttg aaattacaat tcgtgaatta gaagcgaaaa
     3721 caggtgcagg atttatcgta gcgttgacag gtgcaatcat gactatgcct ggtttaccta
     3781 aaaaaccagc agcattaaac atggatgtta ctgatgatgg tcatgcaatt gggttattct
     3841 aataaatcat gtcaattgtt taataaagat aagtaaatag tttaatagac cggactgttg
     3901 gagatgcatt atttcagcag ttcggttttt tgctgtgcta aaaatagatt ccatttggcg
     3961 aatctaacga caatgtttga aggtggttaa ttaatgtata tgaagataaa aagtgggctt
     4021 gaagaatagg aaagcgatgc aatgaatatt catattaaaa aattttaata aaataggttg
     4081 caatatttaa ttgggatgcg ctacaattaa cactaataat tgatattgat aattattatc
     4141 aattaaatat aatcttatag gagttgttaa caacatgaac aaacatcacc caaaattaag
     4201 gtctttctat tctattagaa aatcaactct aggcgttgca tcggtcattg tcagtacact
     4261 atttttaatt acttctcaac atcaagcgca agcagcagaa aatacaaata cttcagataa
     4321 aatctcggaa aatcaaaata ataatgcaac tacaactcag ccaccaaagg atacaaatca
     4381 aacacaacct gctacgcaac cagcaaacac tgcgaaaaac tatcctgcag cggatgaatc
     4441 acttaaagat gcaattaaag atcctgcatt agaaaataaa gaacatgata taggtccaag
     4501 agaacaagtc aatttccagt tattagataa aaacaatgaa acgcagtact atcacttttt
     4561 cagcatcaaa gatccagcag atgtgtatta cactaaaaag aaagcagaag ttgaattaga
     4621 catcaatact gcttcaacat ggaaaaagtt tgaagtctat gaaaacaatc aaaaattgcc
     4681 agtgagactt gtatcatata gtcctgtacc agaagaccat gcctatattc gattcccagt
     4741 ttcagatggc acacaagaat tgaaaattgt ttcttcgact caaattgatg atggagaaga
     4801 aacaaattat gattatacta aattagtatt tgctaaacct atttataacg atccttcact
     4861 tgtaaaatca gataaaaatg atgcagtagt aacgaatgat caatcaagtt cagacgcaag
     4921 taatcaaaca aacacgaata catctaatca aaatacatca acgacgaaca atactagtga
     4981 tcaaccgtac gcaacgacca atatgagtca acctgcacaa ccagtatcgt cagccaatgc
     5041 agatcaagca tcaagtcaac cagctcatga aacaaattct aatggtaata ctaacgataa
     5101 aacgaatgag tcaagtaatc agtcggatgt taatcaacag tatccaccag cagatgaatc
     5161 actacaagat gcaattaaaa acccggctat catcgataaa gaacatacag ctgataattg
     5221 gcgaccaatt gattttcaaa tgaaaaatga taaaggtgaa agacagttct atcattatgc
     5281 tagtactgtt gaaccagcaa ctgtcatttt tacaaaaaca ggaccaataa ttgaattagg
     5341 tttaaagaca gcttcaacat ggaagaaatt tgaagtttat gaaggtgaca aaaagttacc
     5401 agtcgaatta gtatcatatg attctgataa agattatgca tatattcgtt tcccagtatc
     5461 taatggtacg agagaagtta aaattgtgtc atctattgaa tatggtgaga acatccatga
     5521 agactatgat tatacgctaa tggtctttgc acagcctatt actaataacc cagacgacta
     5581 tgtggatgag gaaacataca atttacaaaa attattagct ccgtatcaca aagctaaaac
     5641 gttagaaaga caagtttatg aattagaaaa attacaagag aaattgccgg aaaaatataa
     5701 ggcggaatat aaaaagaaat tagatcaaac tagagtagag ttagctgatc aggttaaatc
     5761 agcagtgacg gaatttgaaa atgttacacc tacaaatgat caattaacag atttacaaga
     5821 agcgcatttt gttgtttttg aaagtgaaga aaatagtgag tcagttatgg acggctttgt
     5881 tgaacatcca ttctatacag caactttaaa tggtcaaaaa tatgtagtga tgaaaacaaa
     5941 ggatgacagt tactggaaag atttaattgt agaaggtaaa cgtgtcacta ctgtttctaa
     6001 agatcctaaa aataattcta gaacgctgat tttcccatat atacctgaca aagcagttta
     6061 caatgcgatt gttaaagtcg ttgtggcaaa cattggttat gaaggtcaat atcatgtcag
     6121 aattataaat caggatatca agacaaaaga tgatgctaca tcacaaaata acacgagtga
     6181 accgctaaat gtacaaacag gacaagaagg taaggttgct gatacagatg tagctgaaaa
     6241 tagcagcact gcaacaaatc ctaaagatgc gtctgataaa gcagatgtga tagaaccaga
     6301 gtctgacgtg gttaaagatg ctgataataa tattgataaa gatgtgcaac atgatgttga
     6361 tcatttatcc gatatgtcgg ataataatca cttcgataag tatgatttaa aagaaatgga
     6421 tactcaaatt gccaaagata ctgatagaaa tgtggataaa gatgccgata atagcgttgg
     6481 tatgtcatcg aatgtcgata ctgataaaga ctctaataaa aataaagaca aagtcataca
     6541 gctgaatcat attgccgata aaaataatca tactggaaaa gcagcaaagc ttgacgtagt
     6601 gaaacaaaat tataataata cagacaaagt tactgacaaa aaaacaactg aacatctgcc
     6661 gaatgatatt cataaaactg tagataaaac agtgaaaaca aaagaaaagg ccggcacacc
     6721 atcgaaagaa aacaaactta gtcaatctaa aatgctacca aaaactggag aaacaacttc
     6781 aagccaatca tggtggggct tatatgcgtt attaggtatg ttagctttat tcattcctaa
     6841 attcagaaaa gaatctaaat aattaactgg atatagcata tgtatgatta actttgtaga
     6901 caatgtgaaa gcaattaatt tataaactat tgattggttt aatggctttc ctttagagta
     6961 aataaaaaga acagcagtga gaaatttt
//
LOCUS       DAKPJH010000123         6922 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.123, whole genome shotgun sequence.
ACCESSION   DAKPJH010000123 DAKPJH010000000
VERSION     DAKPJH010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6922
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.123"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(402..959)
                     /locus_tag="OY092_002306"
     CDS             complement(402..959)
                     /locus_tag="OY092_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4811 domain-containing protein"
                     /protein_id="HCX1077227.1"
                     /translation="MITTIVLTLCTFVSWLLIPHKITRYILGTLFTLALTLTIIGITA
                     NMTNHWGMEKKVITSNKKEIFTGGPKNNPANILIINEIGKNTNNYVMVYRDHPKDKKP
                     TTHFKPKMDKNNISESVKHQAKYEVKNTDKATQQTQKEVWVWKSDLYKSLLSFDESEN
                     ELIQSTTTVTVPKDTWVIINAKKDK"
     gene            complement(961..2478)
                     /locus_tag="OY092_002307"
     CDS             complement(961..2478)
                     /locus_tag="OY092_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000107169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HCX1077228.1"
                     /translation="MSTQKSNAMNLDIHGNQYKPKIIMSIILLATFSGALMQTSLGTA
                     LPTLMNDFDIDFSTAQQATTWFLLANGIMVPLSAFLATRISTRLLHVYSYGALLFGLI
                     LTAIAPSNQDGWLIFLAGRIVTAIAVGLMMPLLQIIIIYMFPIKQRGTAMGLSGLAVG
                     LAPAMGPTFAGWILNKNHEVLGITISDSWRNIFVLPIIIIAIAFILSFFFMKDVIPNR
                     KLKLDLYSLILSCIGFGLFLWGFSNVASEGWGNINYVILPIFLSIIVLTLFVIKQLKS
                     KDPFLDLRVFKSKGFMIATIGLIVVTMAMYGVEMMLPTYLQNIHGFSPFESGLTLLAG
                     ALMLGFISPISGILYNKIGIKRLAFVGFTILTLASVPFGFLTVNTSPTLILVLYAVRM
                     FGVAILMMPLTTNAMDALPVEKGTHATAVNNTARQVASSIAVALLTSVTQNIINNHMP
                     ADSLKESNPLKYAHLAQQASIDGFNTAFIIGIFFAIIGIILVPFLKMNIIESEDK"
     gene            2626..3198
                     /locus_tag="OY092_002308"
     CDS             2626..3198
                     /locus_tag="OY092_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000540837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1077229.1"
                     /translation="MGYKRKTVLTQRNIKNALVSLLENNKFDFITINQIVEEAEITRS
                     TFYRYYDDKYELISEIEEEILEHIHKERQKIDENASEKNLLDIEMFKYLFETLEPYSN
                     TIYRLLGYNGDSSFEMKLKNEISRRFIDIEQRNHISQVRADLVKEYVFVIMIKTLQYW
                     SAHKDEVDIDEIALTIRDIQLKGLRKAIGL"
     gene            complement(3256..4242)
                     /locus_tag="OY092_002309"
     CDS             complement(3256..4242)
                     /locus_tag="OY092_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000662030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HCX1077230.1"
                     /translation="MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEF
                     TNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLN
                     MGCPVANVAKKGKGSGLILRPDVAAEIIQATKAGGLPVSVKTRLGYYEIDEWKDWLKH
                     VFEQDIANLSIHLRTRKEMSKVDAHWELIEAIRNLRDEIAPNTLLTINGDIPDRKTGL
                     ELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQF
                     KSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL"
     gene            4551..4754
                     /locus_tag="OY092_002310"
     CDS             4551..4754
                     /locus_tag="OY092_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077231.1"
                     /translation="MEDLKHSLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVII
                     IFFSIGLILTTHIIIDKIKSSTK"
     gene            4803..5099
                     /locus_tag="OY092_002311"
     CDS             4803..5099
                     /locus_tag="OY092_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000179889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HCX1077232.1"
                     /translation="MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDGVVIGGLYDN
                     RLLVKATKSAQQKLQDNTLVSPYPGAKEMILIPDFDEATNLTDLFKTIKNDLKK"
     gene            complement(5163..6383)
                     /locus_tag="OY092_002312"
     CDS             complement(5163..6383)
                     /locus_tag="OY092_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1077233.1"
                     /translation="MTDLLKIKNFRLFFLAEIISAFGVGISTVGANWYLIDKTNDSQL
                     LGIMLALNVLSGFLASPIIGGLADKYNRRNIILITYLLQVILYLLIVIALVMIGFETY
                     LVIGFAIVNGIGWTTYMATSRSLVKQILKPDQYTDANSLLEISLQTGMFIAGGLSGIL
                     YEINGFTLIIAMTIMMFLISIFMLFRLHVDKPTHSEEESTNSLLQEYLLGWKFLKDNM
                     MIFIFGVISIIPMVFTMIFNISLPGYVYNVLKISSVQFGFSDMLYGIGGLCAGLISAI
                     LSKKISTKVLIFLLYFILVINSALFIWINSAFYLFIGSFILGYSISSIRIYMNTAIMN
                     TVSDKYVGRSFTIWTSISLLLQSFIAPFLGRWINEINDKFGFYIILILSLLIFVTLLI
                     VNKTDKIKYAHKEE"
     gene            complement(6376..>6922)
                     /locus_tag="OY092_002313"
     CDS             complement(6376..>6922)
                     /locus_tag="OY092_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HCX1077234.1"
                     /translation="TCLFGSSRKDGNSAIAVENLLKNLNVNFVNLYQSNIEKVTDNRH
                     SKGANFHNDDYEQILIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQIDNF
                     KEIMSQKKYLILIIGGDNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDILND
                     SQFIEELANINLALKKGDIYD"
BASE COUNT         2390 a         1081 c         1097 g         2354 t
ORIGIN      
        1 aaataaaaaa tattatttga ataataatga gattttatcc ttatatcatt cagggaaggt
       61 tatggatact agcttttcaa ctttaatgta tataggatta tttaaacatt tttctagtta
      121 tttaagaaaa cacgaataaa aaacaactga tgataacaag ttaacaaatt attaaattta
      181 aatcactcta gttcatacca aaaagtcttt aacacaaaca aaaaaggagg aaacttaaat
      241 tcctcctcaa cctttattac acctataatt ctattttaac gtcttcgtcc atttgggctt
      301 caaattcatc tagtagtgct cgtgcttctg cttaatttga atcatacaag gtgttttttg
      361 ttattcctaa aatttggcat agctaaataa atctgtattt tctatttgtc ttttttggca
      421 tttatgataa cccaagtatc ttttggaacg gtaactgtag ttgttgattg aattaattcg
      481 ttttcacttt catcgaagct tagtaatgat ttatataaat ctgatttcca aacccaaact
      541 tctttttggg tttgctgtgt tgccttatca gtattcttta cttcatattt agcttgatgc
      601 ttaacggact cagatatatt atttttatcc attttaggct tgaaatgagt tgtaggtttt
      661 ttatccttag gatgatctct atagaccatg acatagttat ttgtattttt tcctatttca
      721 ttgattatta atatattagc tggattattt ttaggaccac cagtaaaaat ttctttttta
      781 tttgatgtga ttactttctt ttccataccc caatggttag tcatattagc tgtaatacca
      841 atgattgtta gtgtcaacgc aagagtaaat aatgttccta atatatagcg tgtgatttta
      901 tgaggaatta ataaccaact aacaaaagta cataaagtta aaacaatcgt tgttatcata
      961 ttatttatcc tcactttcaa taatattcat ttttaaaaat ggaactaaaa tgatacctat
     1021 aattgcaaag aaaatgccaa ttataaatgc agtattaaag ccatcgattg atgcttgttg
     1081 agcaaggtgt gcatatttga gtggattgct ttcttttaaa ctatctgcag gcatatggtt
     1141 gttaataata ttttgagtaa cagatgtcag taatgctact gctatagatg atgctacttg
     1201 tctagcagta ttatttactg ctgtagcatg tgtgcctttt tcaactggta aagcatccat
     1261 cgcatttgtt gtgagtggca tcattaaaat tgccacacca aacattctta ctgcatatag
     1321 aacaagaata agtgttggtg atgtgttaac tgttaaaaat ccaaatggaa ctgaagctaa
     1381 agttaaaata gtgaaaccaa cgaacgctaa tcttttaatg ccaattttat tgtacagtat
     1441 tcctgaaatt ggagagataa atcccaacat cagtgctcca gctaaaagtg ttaaaccaga
     1501 ttcaaatggt gagaaaccgt gtatattctg taagtaagtg ggtaacatca tttcaacacc
     1561 atacattgcc atagttacaa cgattaaacc aattgtcgct atcatgaaac ctttagattt
     1621 aaaaacgcgt aaatccaaga aaggatcttt agattttaat tgtttgataa cgaacaaggt
     1681 aagaacaatg atacttaaaa aaattggtaa aataacgtaa tttatatttc cccatccttc
     1741 gcttgcaacg tttgaaaatc cccataaaaa taatccgaaa ccgatacaag aaagtattag
     1801 agaatagaga tctaatttaa gtttacgatt aggtataaca tctttcatga agaagaagct
     1861 taatataaat gctatcgcta taataatgat tggaagaaca aaaatattac gccatgagtc
     1921 tgaaattgta atacctagta cctcgtggtt tttgtttaat atccaaccag caaaagttgg
     1981 acccattgca ggtgcgagac ctactgctaa accactcaga cccattgcag taccacgttg
     2041 ttttattgga aacatataaa taatgatgat ttgtaacaat ggcatcatta aaccaacagc
     2101 aattgctgta acaatacgtc cagctagaaa tattaaccag ccatcttgat ttgatggtgc
     2161 gattgcagta agaattaatc cgaataatag ggcgccgtaa gagtatacat gtaacaatct
     2221 agtagatatg cgcgtcgcta aaaatgccga aagtggtacc ataataccat ttgcgagtaa
     2281 aaaccaagtt gttgcttgtt gagcagtact aaaatcgata tcaaaatcgt tcatcaaagt
     2341 aggtagagcg gtacctaatg aagtctgcat caatgcacca gagaatgtag ctaataatat
     2401 aatgctcatt ataattttgg gtttatattg attgccatga atatctaaat tcattgcatt
     2461 acttttttga gtagacataa agcaagcctc ctataggttt ttaaaattaa tactttgaaa
     2521 atataacacc tactttataa acagaacaga acaaaatcat atactttgta caatttgtga
     2581 cactttgttt tattttgtgt tatattcatt tataggagtg atcatatggg gtataaaagg
     2641 aaaacggtct taactcagcg taatataaaa aatgctttag tgagtttatt agagaacaat
     2701 aagtttgatt tcattacaat caatcaaata gtagaagaag cggaaataac aagaagtact
     2761 ttttacaggt attatgatga taaatatgaa ttaatatcag aaatagaaga agaaatttta
     2821 gaacatattc ataaagaaag gcaaaagata gacgagaacg cttcagagaa gaatttatta
     2881 gatattgaga tgtttaaata tctgtttgaa acattagagc catattcgaa cacgatatat
     2941 cgattgttag gatataatgg tgattccagt tttgagatga aactcaagaa tgaaatatca
     3001 agaagattta tagatataga acaacgtaat catatttctc aagtacgagc agacttagta
     3061 aaggaatatg tatttgttat tatgataaaa acattacaat attggtcagc tcataaagac
     3121 gaagtagata ttgatgaaat agctttaaca attagggata tccagttaaa aggattaaga
     3181 aaagcaatag ggttataatt ttaatgaata acaaaaaagg aggaacatta tattcctcct
     3241 tgaccttcat tacatctata attcaatttt aacgtcttcg tccatttggg cttcaaattc
     3301 atctagaagt gctcgtgctt ctgcaattga ttgtgtgttc atcaattgat ggcgaagttc
     3361 gctagcgcct cttatgccac gcacatagat tttaaagaat ctacgcaagc tcttgaattg
     3421 tcgtatttca tctttctcat atttgttaaa caatgataaa tgtaatctca acagatctaa
     3481 tagttctttg cttgtgtgtt cgcgtggttc tttttcaaaa gcgaatggat tatggaaaat
     3541 gcctctacca atcatgacgc catcaatgcc atatttttct gcaagttcaa gtcctgtttt
     3601 tctatcggga atatcaccgt taattgttaa caatgtattt ggtgcaattt cgtcacgtaa
     3661 atttctaata gcttcgatta attcccaatg tgcatctact ttactcattt ctttacgtgt
     3721 acgaagatga atagataaat tggcaatatc ttgttcgaag acgtgcttca accaatcttt
     3781 ccattcatcg atttcatagt agccaaggcg tgttttaaca cttaccggaa gtccacctgc
     3841 tttagttgct tgaataattt cggcagcgac gtcaggtctt aagattaagc cggaaccctt
     3901 acccttttta gcaacatttg ctacaggaca tcccatattt aagtctattc ctttaaagcc
     3961 cattttagct aattgaatac tcgtttcacg gaactgttct ggcttatctc cccatatatg
     4021 agcgaccatc ggctgttcat cttcgctaaa agttaagcgt ccacgcacac tatgtatgcc
     4081 ttcagggtgg caaaagctct cggtatttgt aaattcagtg aaaaacacat ccggtctagc
     4141 tgcttcactt acaacgtgtc gaaagacgat atctgtaacg tcttccattg gcgccaaaat
     4201 aaaaaatgga cgtggtaatt cactccaaaa attttctttc ataatatatt tataccctct
     4261 ttataattag tatctcgatt ttttatgcat gatgatatta ccacaaaaga cgaacttata
     4321 caaaaggaat tttagttgat acaaccattt gaaagggaag tctaagagta gtctaaaatg
     4381 aatgttgtgg taagttgatc agtatacaga tcaaggatta tcgtattaga ttgttcatta
     4441 ttaatgatac actacttatg aaaatgattc agaattttct ttggctactt ttacagtaaa
     4501 gcgatttttt agttatctta taacaaagac aaatttataa aggtgatatt atggaagatt
     4561 taaagcattc tttaaaaagt ttaggttggt gggatttatt ttttgcgata cctatgtttc
     4621 tgctattcgc ataccttcca aactataatt ttataacgat atttcttaac attgttatca
     4681 ttattttctt ttccataggt ttgattttaa ctacgcatat aattatagat aaaattaaga
     4741 gcagcacgaa atgattcatt aatacgaatg tgattaaaca taaaactgaa ggagcgatta
     4801 caatggcgac taagaaagat gtacatgatt tatttttaaa tcatgtgaat tcaaacgcgg
     4861 ttaagacaag aaagatgatg ggagaatata ttatttatta tgatggcgtg gttataggtg
     4921 gtttgtatga taatagatta ttggtcaagg cgactaaaag tgctcagcag aaattgcaag
     4981 ataatacatt agtttccccg tacccaggtg ctaaagaaat gatattaatt ccagactttg
     5041 acgaagcaac aaatctcact gatttattta agaccataaa aaatgatttg aaaaagtgaa
     5101 gtgtgggtgc agagagaact aagcccatcg ataaatggtc gcttgttaaa gaagagtgac
     5161 cgtcactctt ctttatgtgc atattttatt ttgtctgttt tgttaacgat cagcagtgta
     5221 acaaatatga gtaaggataa aatgagtata atatagaaac cgaatttatc attaatttca
     5281 ttaatccatc ttcctaaaaa tggagcaatg aaactctgca gtaacaatga aattgacgtc
     5341 catatcgtaa atgagcgacc gacatattta tctgaaacag tgttcattat agctgtattc
     5401 atataaattc tgattgatga aattgagtag cctagtataa atgatcctat gaataagtaa
     5461 aatgctgagt ttatccaaat aaatagtgct gaatttatga ctaatatgaa atataacaaa
     5521 aatatcaata ctttagttga gattttcttc gaaagaatag ctgaaattaa acctgcacat
     5581 aatcctccaa tgccatataa catatctgaa aaaccaaatt gtacagacga aatttttaaa
     5641 acattatata catatcctgg taatgatatg ttaaagatca ttgtaaacac cattggtatg
     5701 attgaaataa ctccaaaaat aaatatcatc atgttgtctt ttaaaaattt ccatcctaat
     5761 aaatattctt gcaataagct atttgttgat tcttcctctg aatgagttgg tttatctaca
     5821 tgcaatctaa ataacataaa aatgctgatt agaaacatca ttatagtcat cgctataatt
     5881 agagtgaatc catttatctc atataatatt cctgataatc cacctgcaat aaacatacct
     5941 gtttgcaaac taatctctaa tagagaattt gcatctgtat attgatctgg ttttaaaatc
     6001 tgtttaacta aacttctaga tgttgccata tacgtagtcc aacctatccc attaacaatc
     6061 gcaaatccaa tcactaaata ggtctcaaat cctatcatta cgagtgctat gacaatgagt
     6121 aaatataata ttacctgaag aagataggtg attaaaataa tatttcgtct attatattta
     6181 tcggctagtc cacctattat aggagaagct aagaaaccgg ataatacatt taaagctaac
     6241 ataataccta atagttggga gtcgttagtt ttgtcgatta aataccaatt agccccaact
     6301 gtactaattc caactccgaa tgctgaaatt atttctgcta aaaagaacaa tctgaagttt
     6361 ttaattttca acaaatcagt cataaatatc accttttttc aatgcaagat ttatatttgc
     6421 gagctcttct ataaattgag agtcgtttaa aatatcgaat ggtttattgc cttcgccgat
     6481 caaaaatcta tagttagtaa tattcataaa ctcaaatatt aatttgaatt ggttgactaa
     6541 aggttgtgct ttggtatgtg gattgtcgcc acctatgatt aaaatcaaat actttttttg
     6601 tgacatgatt tctttgaagt tgtctatttg cgtatctcgc aatgactcgg tccatctatc
     6661 aatgaagagt tttaaagacg cactcatgga gtaccaatag agtggtgttg aaaaaataat
     6721 aatatctgat tctaaaactt tgattaaaat ttgttcgtaa tcatcattat gaaagttggc
     6781 acctttgcta tgacgattat ctgtaacctt ttcaatgttg ctttgatata aattcacaaa
     6841 gttgacattt aaattcttca atagattctc tactgcgata gctgaattgc catcttttct
     6901 actacttcca aataaacaag ta
//
LOCUS       DAKPJH010000124         6918 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.124, whole genome shotgun sequence.
ACCESSION   DAKPJH010000124 DAKPJH010000000
VERSION     DAKPJH010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6918
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.124"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            460..1653
                     /gene="fmtA"
                     /locus_tag="OY092_002314"
     CDS             460..1653
                     /gene="fmtA"
                     /locus_tag="OY092_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala esterase FmtA"
                     /protein_id="HCX1077235.1"
                     /translation="MKFNKVKLVIHACVLLFIIISIGLVFHRLQTKTNSIEPIHKETK
                     LSDNAKYLVDRNKGKGEPSKLKEVYNSKDPKYKKIDQYLQNSLFNGSVAVYENGKLKM
                     SKGYGYQDFEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYIPWFK
                     TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVRAIQKRGIDPKKYKKHMYNDGNYLV
                     LAKVIEEVTGKSYAENYYTKIGDPLKLQHSAFYDEKSFRKYLAKGYSYNSTGLSFLKP
                     NVLEQYYGAGNIYMTPTDMGKLITQMQQYKLFSPKITNPLLHEFGTKQYPDEYRYGFY
                     VKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTK
                     GVIVQ"
     gene            complement(1996..2274)
                     /gene="qoxD"
                     /locus_tag="OY092_002315"
     CDS             complement(1996..2274)
                     /gene="qoxD"
                     /locus_tag="OY092_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HCX1077236.1"
                     /translation="MKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFIQAG
                     LQLLMFMHLTEGKDGRLQTFKVIFALVITLCFVVGTYWVMQGGHSSHL"
     gene            complement(2283..2888)
                     /gene="qoxC"
                     /locus_tag="OY092_002316"
     CDS             complement(2283..2888)
                     /gene="qoxC"
                     /locus_tag="OY092_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HCX1077237.1"
                     /translation="MSHDTNTIDSRTHEGELNKLGFWIFITAEFALFGTLFATLLTLQ
                     HGGDYAGKMTTELFELPLVLIMTFALLFSSYTCGIAIYYMRQEKQKLMMFWMIITLLL
                     GLVFVGFEIYEFAHYASEGVNPTIGSYWSSFFILLGTHGCHVSLGIVWAICLLIQIQR
                     RGLDKYNAPKLFIVSLYWHFLDVVWVFIFTAVYMIGMVYSG"
     gene            complement(2878..4866)
                     /gene="qoxB"
                     /locus_tag="OY092_002317"
     CDS             complement(2878..4866)
                     /gene="qoxB"
                     /locus_tag="OY092_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001010769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HCX1077238.1"
                     /translation="MNFPWDQLLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLY
                     KEWFTSVDHKKIGIMYLICAVLMFVRGGIDALLIRAQLTVPDNKFLESNHYNEIFSTH
                     GVIMIIFMAMPFIFGLWNIVVPLQIGARDVAFPVLNNVSFWLFFAGMILFNLSFIIGG
                     SPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGLGTLATGINFFVTILRCKTPTMKFM
                     QMPMFTVTTFITTLIVILAFPPLTVALALMTTDRIFDTAFFTVAHGGMPMLWANFFWV
                     WGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMG
                     NGALINSFFSISTMLIGIPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVT
                     GVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNETLNKW
                     CFWFFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWFLLNLISTIGALLMAIGFLFL
                     VVSIVYSHFKSPREATGDNWDGLGRTLEWTTASAIPPKYNFAITPDWNDYDTFVDMKE
                     HGRHYLDNHNYKDIHMPNNTPVGFWIGIFMTIGGFFLIFETVIPALICLFGIFGTMIY
                     RSFQIDHGYHIPAAEVAETEARLREARIKEREAVSHES"
     gene            complement(4866..5966)
                     /gene="qoxA"
                     /locus_tag="OY092_002318"
     CDS             complement(4866..5966)
                     /gene="qoxA"
                     /locus_tag="OY092_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HCX1077239.1"
                     /translation="MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSI
                     VFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTV
                     KTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAM
                     DTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVS
                     QKDYDKWVKEVKGKKTLDQDTFDKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAY
                     KRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHGMKLMILGNDEPYNN
                     EFKKDESKNAKEMKKISKDAQDQDNDDHGGGH"
     gene            complement(6538..6855)
                     /locus_tag="OY092_002319"
     CDS             complement(6538..6855)
                     /locus_tag="OY092_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
                     /protein_id="HCX1077240.1"
                     /translation="MNKLLQSLSALGVSATLVTPNLNADATTNTTPQIKGANDIVIKK
                     GQDYNLLNGISAFDKEDGDLTDKIKVDGQIDTSKSGKYQIKYHVTDSDGAIKISTRYI
                     EVK"
BASE COUNT         2486 a         1058 c         1173 g         2201 t
ORIGIN      
        1 attttaaaaa tttattcatg attgatgctc ctatattaaa tttttgttaa atcataatca
       61 taattttaaa atataattag ttgaacgata tttatacaac ttcattacta atacattata
      121 gccttaaatt gtagtacttt atagtaaaaa atacaaatgt tatgtcaaag ttccttgtaa
      181 tttgaatgtt ttgttaaaat caaaaagcat tttaaaaaat ataatgcgac tttagtatga
      241 tgtctaaaaa aaattaaagg ggtaatataa atttgagtga tttatacaat gtgataaggt
      301 ataattaaat ttgttgtaat aagaacttat atgaagaaaa tattactaag tagcataacg
      361 cataagtggg tgacagataa aattgtaagt gatattataa cgaagttaag gttattgttt
      421 taattattta atttgaatac aatgagaggc tattagcgaa tgaaatttaa taaagtgaaa
      481 ttggttatac atgcatgcgt gcttttgttc atcattatct ctataggatt agtttttcat
      541 cgattacaaa cgaaaacgaa ctctatagaa cctatacata aggaaacaaa attatcggat
      601 aatgcgaaat atttggttga tcgtaataaa ggcaaaggtg agccatcgaa attaaaggaa
      661 gtatacaata gtaaagatcc aaagtataag aagattgacc agtatttaca aaattcatta
      721 tttaatggtt cagtagcggt atatgaaaat ggcaaattga aaatgagtaa aggctatgga
      781 tatcaagatt ttgaaaaagg aattaaaaat acaccaaata cgatgtttct aattggttca
      841 gctcaaaaat tttcaacagg attactgtta aaacagttag aagaagaaca taaaattaat
      901 attaatgatc cagtaagcaa atatattcca tggtttaaaa catctaagcc cattccttta
      961 aaagacttga tgctgcatca aagtggatta tataaatata aatcttcaaa agactataag
     1021 aacttagatc aagcagtgag agcaattcaa aaacgtggca ttgatcctaa gaaatacaaa
     1081 aagcatatgt ataatgatgg gaattatttg gtgctagcta aagttatcga agaagttacc
     1141 ggcaaatcat atgccgagaa ttactataca aaaatagggg atcctctaaa acttcagcat
     1201 tcagcatttt atgatgaaaa atcatttaga aaatatttag caaaaggtta ttcttataat
     1261 agtacaggac tttctttctt gaagcctaat gttttagaac aatattatgg tgcaggtaat
     1321 atatatatga caccaacaga tatgggtaaa ttaattactc aaatgcaaca atataaatta
     1381 tttagtccta aaataaccaa cccattatta catgagtttg gtacgaaaca gtatccagat
     1441 gaatatcgat atggtttcta tgttaagcca acattgaata gacttaacgg gggattcttt
     1501 ggacaagtct ttactgttta ctataatgat aagtatgtag ttgtacttgc attaaatgta
     1561 aaaggaaaca atgaagttcg aatcaaacat atttataatg atattttaaa acaaaataaa
     1621 ccttacaata cgaagggtgt tattgttcaa taattaatat agaagatata acttgtatat
     1681 ggcattaagg cattgacctt atttgactag tatacgagtt atatcttctt ttttatagag
     1741 gtgaaaagtt taaagtataa ggttgaagta gtaggatgat aaatttgcgt taagttaaaa
     1801 agatataaac aattgatgta aatgtcaata taaaaatgta tataaatgat tgtataagaa
     1861 tgtattaatt gaatggataa taatgattgt cttttaagat atagaagggg acttaaccat
     1921 ttaaaaattg aaggaaaata aaaaccagct aacaaaagtg ttagctggtt aaactttaca
     1981 ttattaaaat gttgtttata agtgtgaaga gtgaccgcct tgcataaccc aatatgttcc
     2041 gacaacgaaa caaagtgtaa ttacaagagc aaagataact ttgaatgttt gtaaacgtcc
     2101 atctttacct tcagttaaat gcatgaacat taataattga agtccagctt ggatgaatgc
     2161 aaagccaaag ataattgtca acttcgcgtg gaatgttaat gacgtgtata gtgttacgta
     2221 aactgctaaa agcgttaata cgatagatgc gataaatcct acagtatgtt tcattattgt
     2281 actcatccgc tatacaccat ccctatcata tatacggcag taaagatgaa aacccaaaca
     2341 acatctaaga agtgccagta taaacttact ataaataatt ttggcgcatt atatttgtct
     2401 aatccgcgtc gttggatttg gattaataaa caaatggccc aaacgatacc tagcgatacg
     2461 tgacaaccat gcgttcctaa taggataaag aaactagacc agtaagaacc aattgttggg
     2521 ttaacgcctt ctgatgcata gtgtgcgaat tcataaattt cgaatccaac aaagactaaa
     2581 cctaaaagta acgtaatgat catccaaaac atcattaact tttgtttttc ttggcgcatg
     2641 tagtaaatag caataccaca tgtgtaagaa ctgaataata atgcaaacgt cattattaaa
     2701 acaagaggca attcaaataa ctcagtagtc attttacctg cataatcgcc accatgttgc
     2761 aaagttaata gtgtcgcaaa tagggtaccg aataacgcaa attcggctgt aatgaaaatc
     2821 caaaagccaa gcttatttaa ttcgccttca tgtgtgcgtg aatcaatagt gtttgtatca
     2881 tgactcatga cttacagcct ccctttcttt aatacgcgct tctcttaatc tagcttcagt
     2941 ttcagcaact tcagcagcag ggatatgata tccgtgatcg atttggaaac tgcgataaat
     3001 catagtacca aaaataccga ataaacaaat taatgctgga attacagttt cgaaaattaa
     3061 gaagaaaccg ccgatagtca taaagatacc aatccagaat ccaacaggag tattgtttgg
     3121 catatgaatg tctttgtaat tatggttgtc taagtaatga cgaccatgtt ctttcatatc
     3181 aacaaatgtg tcgtagtcat tccaatctgg tgtaatggca aagttgtatt taggtggaat
     3241 tgctgatgca gtagtccact ctagagtacg accaaggcca tcccagttat ctccagttgc
     3301 ttcacgtgga gatttgaagt gactgtatac gatactaaca acaaggaata agaatccgat
     3361 tgccattaat aatgcaccga tagttgaaat taagtttaat aagaaccaac catctgatgg
     3421 catataagtg tataaacgac gtggcatacc atctaatcca agaatgaatt gtggtaagaa
     3481 acaaacgtta aatccgatca tgaagaacca gaagcaccat ttgtttaatg tttcgtttaa
     3541 tttgtaaccc atcatctttg gataccagaa gattaaacca gctaagcagg caaatacaac
     3601 accagtaacc aatgtatagt ggaagtgagc tactaagaag tacgtattgt gatattgata
     3661 gtcagctgat gccattgcta acattacacc cgtaacacca cctaaaagga agttagggat
     3721 aaatgctaat gagaatagca ttggtgactc aaatgtaata cgtcctttat ataatgttaa
     3781 taaccagtta aacaatttca caccagttgg aataccaatc agcattgttg aaattgagaa
     3841 gaatgagttg attaacgcac cattacccat tgtgaagaaa tggtgaaccc aaactaagaa
     3901 actaaggaac gcgataccgg cagttgccca taccatactt tgatgtccga ataaacgctt
     3961 acgagcgaat gtcgggataa tttctgagta aataccaaat gctggaagga taacgatata
     4021 aacttcaggg tgcccccata cccagaagaa gttagcccaa agcattggca taccgccatg
     4081 tgcaactgtg aagaatgctg tgtcaaatat tctatcagtt gtcattaatg ctaacgctac
     4141 tgttaaagga gggaaagcaa gaataacaat taatgtagta ataaatgttg ttactgtaaa
     4201 cattggcatt tgcataaact tcatagttgg tgttttacat cttaaaattg ttacaaagaa
     4261 gttgatacct gtagctaagg taccaagccc tgaaatttgt atagctatta agtaatagtt
     4321 aacacccgga ccaggactga attcacctgc tagtggcgca tagtttgtcc aaccagctgc
     4381 tggtgaacca ccaataataa atgacaggtt gaataaaatc atacctgcaa agaatagcca
     4441 gaaacttacg ttgtttaata ctgggaatgc aacatcacgt gctccaattt gtaatggaac
     4501 aacgatattc cataaaccaa agataaatgg cattgccatg aagataatca tgattacacc
     4561 atgtgtacta aaaatttcgt tatagtggtt agattctaaa aatttgttat caggtactgt
     4621 taattgcgca cgaataagta acgcatcaat accaccacgg acgaacatta atacggcaca
     4681 gattaaatac ataataccga ttttcttatg gtctacagat gtgaaccatt ctttgtaaag
     4741 atatttccat aatttaaagt aagtaattac tgcgattaaa ccaataacta agaatggggc
     4801 accaatttgt gccattgtaa tcatccagtt acctttaact agtaattgat cccatggaaa
     4861 attcattaat gtccacctcc atgatcatca ttgtcttgat cttgcgcatc ttttgaaatt
     4921 ttcttcattt ctttcgcatt tttcgattca tctttcttga actcattgtt atatggttcg
     4981 tcatttccaa gaatcatcaa tttcatacca tgtcgtttat agttcgcatt tgtaatttga
     5041 gctttacgag caggtattaa tggtttgtct gatacatctt taaacatatt ttcttcacta
     5101 gtgaagtttg gatctttcaa ttcgaaattg aaacgtttat atgcatagaa gatgtattct
     5161 ggatcggctg ctggatcaac aaacgccata tgtgtaccat taaattctaa agctttatta
     5221 ggtgtgcttg gtaataattg tttatcaaat gtatcttgat ctaacgtttt cttaccttta
     5281 acttctttca cccatttgtc gtagtctttt tgactaacgg catttacttt aaatgtttga
     5341 cgtgagaatc cttcaccatt gaagttagag ttacgacctc tgaacgtacc agtttgagat
     5401 gcttctaacg tccaattcat tgtcatgcca gtcatggcat atttttgacc acctaattgt
     5461 ggaatccaga aacttgtcat tgtatccata gcttgaagct taaatacaac aggacgatct
     5521 ttagggattg ttaatgtatt aacagtctct atatgttcat ctggataagc aaagaaccat
     5581 ttgtatcctg cacttactgc atatacaacc attggatctt tctcactctt cggtggtttt
     5641 tcgtaatcgt ataaagtttt aactgtagga atagctaaag cagcaacgat tatgataggt
     5701 attacaaacc atattgtttc aatgatggca ttatggtgca tcttaccaga ttcggcattc
     5761 ttattataac tatacttgta aataaaaatg gcgaacatgc caagtacaac gaaacaaata
     5821 acaagcatga agacgattga ataaagaatc aagaacttct gactacttgc tactggccct
     5881 tttgcgttga aaatttctat atttgaacaa ccactaagta aaattagtgt gccaaataat
     5941 agaagcaaag acttaaattt tgacactttt ttgacctcct aatactacaa atgtagggct
     6001 taacattaat tttaagttat tacacaatat ttacaagggc ttatgggaaa aaaattaata
     6061 aaattgtatc aaaaatgttg ataaatcaag gtgtgacgtg ggttcacaca tttgttaaaa
     6121 ttatgtgtac attttgtgac taatagcgtt tttgaaaaaa ttgcttcata tttaaaaggg
     6181 aagttgagaa tagctttcaa ttaaaggtta attgaatgaa aataaaaaaa gtttgaaatt
     6241 gtctaataaa ttgaaaatga tggctagttc attgaaagga agcgcaaaca ttttaataag
     6301 gaatttgcca aaagtaattt atcgttaaac aatgaaaagt agaaatttgt ttgttcaaaa
     6361 tcaaaatatt cttttaaaaa gagcggttaa gttttaataa tttgaaaggt agtcctttgg
     6421 tatacagaaa aaatacaata tttgggttaa agttgcagat gaagttggaa taacaaataa
     6481 aatggtagca aaacatgtac gtttgctacc attttatttg cagtatagtg atgagggcta
     6541 tttaacctca atatacctag tggaaatttt aattgcacca tctgaatcag tgacatgata
     6601 tttaatttga tatttaccag atttagatgt atcaatttgg ccatcgactt taattttatc
     6661 ggttaaatct ccatcttctt tatcaaatgc acttatgccg tttagaaggt tataatcttg
     6721 acctttctta ataacgatat cattagcgcc tttaatttgt ggtgtagtat tcgtcgttgc
     6781 atctgcattt aaatttggtg ttactagtgt agcagaaaca ccgagggctg ataatgactg
     6841 taatagttta ttcataatgt aacctccgaa tgataagtca tttctgagtt agctttacta
     6901 taccttaatt tatattat
//
LOCUS       DAKPJH010000125         6809 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.125, whole genome shotgun sequence.
ACCESSION   DAKPJH010000125 DAKPJH010000000
VERSION     DAKPJH010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6809
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.125"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(63..1049)
                     /locus_tag="OY092_002320"
     CDS             complement(63..1049)
                     /locus_tag="OY092_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HCX1077241.1"
                     /translation="MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVV
                     TIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKL
                     QVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE
                     KLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYH
                     KKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKD
                     IFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA"
     gene            1578..2336
                     /gene="map"
                     /locus_tag="OY092_002321"
     CDS             1578..2336
                     /gene="map"
                     /locus_tag="OY092_002321"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HCX1077242.1"
                     /translation="MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAK
                     ELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYY
                     ADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLK
                     VIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNE
                     WAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE"
     gene            2553..2939
                     /locus_tag="OY092_002322"
     CDS             2553..2939
                     /locus_tag="OY092_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077243.1"
                     /translation="MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITK
                     KEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIET
                     QIQQTSTEKIATEKTSYLINYMNAVA"
     gene            2954..3655
                     /locus_tag="OY092_002323"
     CDS             2954..3655
                     /locus_tag="OY092_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HCX1077244.1"
                     /translation="MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLV
                     YVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKV
                     VATDEVMTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTI
                     VVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVN
                     IYVSTFIGDVEVIYR"
     gene            3652..4695
                     /locus_tag="OY092_002324"
     CDS             3652..4695
                     /locus_tag="OY092_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HCX1077245.1"
                     /translation="MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIF
                     GIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYS
                     ETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
                     QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLG
                     EGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVE
                     LFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIE
                     VKAPLNKEDSYDD"
     gene            4685..5314
                     /gene="vraR"
                     /locus_tag="OY092_002325"
     CDS             4685..5314
                     /gene="vraR"
                     /locus_tag="OY092_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator VraR"
                     /protein_id="HCX1077246.1"
                     /translation="MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKA
                     HELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSY
                     ILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
                     KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ"
     gene            complement(5427..6644)
                     /locus_tag="OY092_002326"
     CDS             complement(5427..6644)
                     /locus_tag="OY092_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HCX1077247.1"
                     /translation="MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQF
                     QSKKPKKDDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMF
                     PMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILA
                     IWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVI
                     SHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFT
                     SIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQR
                     SVIKGKTPEEAALEHDDNNKNHYNENTRYEYDEDSNATHQRTYHVDEHPSDTYPEDDK
                     NIKDKIVDKLKKD"
BASE COUNT         2440 a         1002 c         1173 g         2194 t
ORIGIN      
        1 attttacgaa aatatcattt ctgtcccact cccatggtgc caattagcat aagatactta
       61 aattaagcat atctgctgtc tagcagtcga taaatcatta gaacttcgta tagtatatga
      121 cttttaattt gattttcacc actaatttca agtgctttta ttgtcgaacg taaagtttct
      181 acagaatcat cttctctctt aaaagaacca tcataaaata tatctttgat gctactacta
      241 atttttagca atgccatttt ttcgtcacct gaaaagttaa cacgagtatt tttaggcaag
      301 taaatgatat ttgataaatg agtgataaac aaacgattcg tatatgcacg tttagttaat
      361 tgattgagta atttccaatc acattctttt ttcttatgat agcttaattc atcacgttga
      421 taacttatta acgtttcaac ttgattgttt aaattgaaaa tatttttata tgctttttcg
      481 cttttatcag attgcagtct tgataagata agttcttggc agcgattgta aaataattta
      541 tacatcaagg catctgtctt acttaatttt tcttcgacct gaccataata cttaggtgga
      601 aacaccatga agttaattaa acctgatgtc acgagtccaa taattgctgt caatgttcga
      661 gacaaaaagt tgaatatgta ggcatcatga atacctggaa tcatagctaa tgatgttagt
      721 acagcgacat tcgtaccaac ttgcaatttg agttttgtac agaataaaat cgtgaacgtt
      781 gcactcaatg catatgtaaa aggtgattga tcgccgaata aatatgtaaa taatactgca
      841 aagcctgcac caattaccgt agcaggtaat ctacgataac ctttaataag tgatgccttg
      901 gcagttggtt caattgtgac tacagctgtt aaaatggcat agatgggtgt taaatctagt
      961 gccatacaaa agacagctgt taaaaaaatg gcaataccag ttttaattgt tctggcacca
     1021 attaaatgtt tataccattg atcgttcatt ttttaacctc taatcatcgt aaaatcttag
     1081 cgagcgcttt ataataatag tatcgtacat tggaaaagtt catgtatgta aaatatttga
     1141 aataatcata cttaagcatt actttgattt tcatatacat taatcaaagt tctgggctcc
     1201 acaatgttat attgttagta gttgactgaa ataaaatgca cttgtaacaa gcatttttca
     1261 attatagtcc ggggccccaa cacagaagct gacgaaaagt cagcttacaa taatgtgcaa
     1321 gttggggtgt gggccccaac atagagaatt tcaaaaaaga aattctacag gcaatgcaag
     1381 ttggggtgtg ggccccaaca cagagaattt cgaaaagaaa ttctacaggc aatgcaagtt
     1441 ggggacgata aagaaatatt ttttctttat cacactatgt ctcactcact ttccaaaata
     1501 ctaaagtaac atctttagta tatcaaagaa tttttgctat aataagttat aattatataa
     1561 aaaaggaacg ggataaaatg attgtaaaaa cagaagaaga attacaagcg ttaaaagaaa
     1621 ttggatacat atgcgctaaa gtgcgcaata caatgcaagc tgcaaccaaa ccaggtatca
     1681 ctacgaaaga gcttgataat attgcgaaag agttatttga agaatacggt gctatttctg
     1741 cgccaattca tgatgaaaat tttcctggtc aaacgtgtat tagtgtcaat gaagaggtgg
     1801 cacatgggat tccaagtaag cgtgtcattc gtgaaggaga tttagtaaat attgatgtat
     1861 cggctttgaa gaatggctat tatgcagata caggcatttc atttgtcgtt ggagaatcag
     1921 atgatccaat gaaacaaaaa gtatgtgacg tagcaacgat ggcatttgag aatgcaattg
     1981 caaaagtaaa accgggtact aagttaagta acattggtaa agcggtgcat aatacagcta
     2041 gacaaaatga tttgaaagtc attaaaaact taacaggtca tggtgttggt ttatcattac
     2101 atgaagcacc agcacatgta cttaattact ttgatccaaa agacaaaaca ttattaactg
     2161 aaggtatggt attagctatt gaaccgttta tctcatcaaa tgcatcattt gttacagaag
     2221 gtaaaaatga atgggctttt gaaacgagcg ataaaagttt tgttgctcaa attgagcata
     2281 cggttatcgt gactaaggat ggtccgattt taacgacaaa aattgaagaa gaatagttca
     2341 acatatacta agactaaagt atgaacatca tttagttccg gagcctattc atattggttt
     2401 cggaactgtt ttataataat taagaacaca atcaatgcgt catttcaaaa atatgttgta
     2461 ataaagtagt ttttaagcaa acatatcatc gacatcaacg aagatacata gcgcatttgg
     2521 tattttaaaa cttattataa aaggtgatag ttatgaacta tgttgaacgt tatattgaac
     2581 agtttttgag agcaacagta agaaataata tcaagcacta ccttttaatg ctagatgaaa
     2641 aaatgaaaaa tttagatgat tatatgcgtt atttaattac taaaaaagaa caacttagca
     2701 agttaattga cagtctaatg ctaacattag aaaataaata tattgatatt gctgaagcat
     2761 ttcaaattca atgtgcaaga gaaatcaata atcaagaaat tgaaaatatt aaatcagagt
     2821 tgaataaagt tgaagcatat tatgcacaaa ttgaaactca aattcaacaa acttcaactg
     2881 aaaaaatagc aacagaaaaa acatcgtatc taataaatta tatgaacgct gtggcataga
     2941 aaggcggcga aacatgacac acaaatatat atcaacgcaa atgttgatta tttttactgc
     3001 attaatgatt attgccaatt tttactacat attttttgaa aaaattggct ttttactcgt
     3061 tctattattg ggatgtgtat tagtttatgt aggatatctt tattttcata aaatacgtgg
     3121 ccttttggcg ttttggatag gcgcgctatt aattgcattc acattattgt ctaataagta
     3181 tacaatcatc atcttgttcg tctttttatt actacttatt gtgcgttatt taatacacaa
     3241 atttaaacca aaaaaagtag ttgcgacgga tgaggttatg acttcaccat cttttattaa
     3301 acaaaagtgg tttggtgagc aacgcacacc agtttatgta tataagtggg aagatgtcca
     3361 aatccaacat ggaattggcg acctacatat tgacttaaca aaagctgcaa atattaagga
     3421 aaataatacc attgttgtga gacacatttt aggtaaagta caggttatat tgccggttaa
     3481 ttacaatatt aatttacatg tagctgcttt ttatggaagt acttacgtga atgaaaaatc
     3541 atataaagtt gaaaataaca atattcatat tgaagaaatg atgaaaccgg ataactatac
     3601 agttaatatc tacgtatcaa cgtttatcgg agacgtagag gtgatttatc gatgaaccac
     3661 tacattagaa caattggttc aatgctcatc ttagtatata gcatgctagc tgcatttcta
     3721 ttcatcgata aagtttttgt aaatatcatc tattttcaag gtatgtttta tacacaaata
     3781 ttcggaatac cagtcttttt atttttaaat ctcatcatca tattattgtg tattattgtt
     3841 ggttcggtac tcgcttacaa aatcaatcag caaaatgatt ggattaagac gcaaattgag
     3901 cgttcaatgg aaggcgaaac agttggcatt aatgatcaaa atatagaaat atatagtgaa
     3961 acgttagatt tataccatac actcgtacct ttaaatcaag aattgcataa gttgcgactt
     4021 aaaactcaaa acttaaccaa tgaaaattat aatattaatg atgtgaaagt taaaaagatt
     4081 attgaagatg aacgtcaaag actagcacga gaacttcacg attctgttag tcagcaactt
     4141 tttgcggcaa gtatgatgct atctgctatc aaagaaacga agttagaacc accattagac
     4201 caacaaattc ctattttaga gaaaatggtt caagattcgc agttagaaat gcgtgctttg
     4261 ctgttacatt taagaccgct tggtttaaaa gacaaatctt taggtgaggg tattaaagat
     4321 ttagttattg atttacaaaa aaaagtgcca atgaaagttg tgcatgaaat acaagatttt
     4381 aaagtgccta aaggtattga agatcatttg ttcagaatta cacaggaagc aatttcgaat
     4441 acattgcgtc attcaaacgg tacaaaagtg acagtagaat tgtttaataa agacgattat
     4501 ttattgttga gaattcaaga taatggtaaa ggttttaatg ttgatgaaaa attagaacaa
     4561 agttatggac ttaaaaatat gcgtgaaaga gctttggaaa ttggtgcaac gttccatatt
     4621 gtatcattgc cagattcagg tacacgtatc gaggtgaaag cacctttaaa taaggaggat
     4681 tcgtatgacg attaaagtat tgtttgtgga tgatcatgaa atggtacgta taggaatttc
     4741 aagttatcta tcaacgcaaa gtgatattga agtagttggt gaaggcgctt ctggtaaaga
     4801 agcaattgcc aaagcccatg agttgaagcc agatttaatt ttaatggatt tacttatgga
     4861 agacatggat ggtgtagaag cgacgactca gattaaaaaa gatttaccgc aaattaaagt
     4921 attaatgtta actagtttta ttgaagataa agaggtatat cgtgcattag atgcaggtgt
     4981 cgatagttac attttaaaaa caacaagtgc aaaagatatc gccgatgcag ttcgtaaaac
     5041 ttctagagga gaatctgttt ttgaaccgga agttttagtg aaaatgcgta accgtatgaa
     5101 aaagcgcgca gagttatatg aaatgcttac agaacgagaa atggaaatat tattattgat
     5161 tgcgaaaggt tactcaaatc aagaaattgc tagtgcatcg catattacta ttaaaacggt
     5221 taagacacat gtgagtaaca ttttaagtaa gttagaagtg caagatagaa cacaagctgt
     5281 catctatgca ttccaacata atttaattca atagttcgta tcgaattaag aaaagttact
     5341 tacgccaatc acaatataac atcaaataga caccaaaaaa cagaggtctt cgcaatcatt
     5401 agcgaaaacc tctgttttgt tggtgtttag tcttttttaa gcttatcaac gattttgtct
     5461 tttatatttt tatcatcttc tggataggta tcactaggat gttcatcaac atgatacgta
     5521 cgttgatgtg ttgcattact atcttcatca tattcgtatc tagtgttctc attataatga
     5581 tttttattat tgtcatcatg ttctaatgct gcttcttcag gtgttttacc tttaattaca
     5641 ctacgctgat gaatgattgc attgatttca gcaccgacaa ttataataaa acttgtgata
     5701 tataaccata gtaataaaat gatgataccc gcgatactgc catatgtttt agaatagtta
     5761 ccaaaatttg aaatatacca accaaaacca aatgaaccag ctaaccaaat aattgaagta
     5821 aatactgcac ctggtaatac tgacttaagc ttcgttttaa cgttaggtgc aaccgaatat
     5881 aacacgataa atatgataaa tataataatg attggtaaca caattctaat aaggttaaaa
     5941 atccatttca cttgttcgtc aaatccaagt ggaccgaata ggaaatgact aattacagaa
     6001 ccaagcgttg gtaatgctag agcaactaca aacacaacgc ccataactac agtgaagaca
     6061 acacttagta gttttaaaac gattccatta cggctatctt ctacatcgta agcaacattg
     6121 aaagaattca taattgcagt cattccattt gaagctgacc aaattgctaa aatcaaaccg
     6181 atagataata agccaccact ggagttttga gttatatcac caattacact cttaattaga
     6241 gtagatgttt cagcgggtgc attgcttaac atattagtaa tttgactctg cttaatattg
     6301 aaaaatggta ataatgttaa taggaaaagc aacataggga acatagcaag tacgaaatgg
     6361 taagtcattt gcgctgctag tcctgaggca tcatcttttc ctatgcgata gatgagatat
     6421 gataagaaat tagagtcttt cttatatttt gcaggtttat ttaatcttga taagaagaaa
     6481 acctgatcat cttttttagg tttcttagat tggaattgtt gaggttcaat atatgtacga
     6541 tcaacatcaa ttttgggatt acttttattt ttcttttttg actcctcttg cgcttcctta
     6601 acagaattaa ggtattttga agaagagtga tcctttttcg acatgtgcac tccttaacct
     6661 ttctctatgt aatgttttat aaagtaacta ttagtattta tccaattata aaaaaactaa
     6721 acaatgatat gctttaaaaa tgataatatt atagaaatta attgatttaa atctttcata
     6781 ggctattttg atttaaaatt aaaacaaag
//
LOCUS       DAKPJH010000126         6782 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.126, whole genome shotgun sequence.
ACCESSION   DAKPJH010000126 DAKPJH010000000
VERSION     DAKPJH010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6782
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.126"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(90..1070)
                     /gene="czrB"
                     /locus_tag="OY092_002327"
     CDS             complement(90..1070)
                     /gene="czrB"
                     /locus_tag="OY092_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc efflux transporter CzrB"
                     /protein_id="HCX1077248.1"
                     /translation="MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLA
                     NSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFV
                     ISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAF
                     LHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEG
                     TPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLE
                     NIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH"
     gene            complement(1072..1392)
                     /gene="czrA"
                     /locus_tag="OY092_002328"
     CDS             complement(1072..1392)
                     /gene="czrA"
                     /locus_tag="OY092_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)-responsive metalloregulatory
                     transcriptional repressor CzrA"
                     /protein_id="HCX1077249.1"
                     /translation="MSEQYSEIHTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGH
                     ISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPK
                     ESGL"
     gene            1544..2209
                     /locus_tag="OY092_002329"
     CDS             1544..2209
                     /locus_tag="OY092_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1077250.1"
                     /translation="MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQG
                     MKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKE
                     ANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAA
                     GSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNYQEFQIISGEQDIKDALTQFEI
                     EKD"
     gene            2645..3583
                     /locus_tag="OY092_002330"
     CDS             2645..3583
                     /locus_tag="OY092_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001620169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I mannose-6-phosphate isomerase"
                     /protein_id="HCX1077251.1"
                     /translation="MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGT
                     SEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYE
                     HENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEF
                     YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNA
                     PLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMI
                     VDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV"
     gene            3614..3844
                     /locus_tag="OY092_002331"
     CDS             3614..3844
                     /locus_tag="OY092_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077252.1"
                     /translation="MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAM
                     LTFKDKQISASLKFSALLINVLPLCGTFVASN"
     gene            4518..5891
                     /locus_tag="OY092_002332"
     CDS             4518..5891
                     /locus_tag="OY092_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HCX1077253.1"
                     /translation="MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRA
                     FKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKR
                     SEALEFRMSNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIY
                     THTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNST
                     VIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGL
                     KSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPD
                     FSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLE
                     GYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTR
                     IVKVKHD"
     gene            6347..6760
                     /locus_tag="OY092_002333"
     CDS             6347..6760
                     /locus_tag="OY092_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HCX1077254.1"
                     /translation="MPIVYYDGNCIYCYNYVIWLIQHDLPRNYRFATLKGEVGQQFFK
                     QHPEAANKNSVILQKGDRIYFESQAIIQLITALPNRTKLLGVGLWLVPKPVRNFGYRM
                     FANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD"
BASE COUNT         2449 a          925 c         1252 g         2156 t
ORIGIN      
        1 atcaaagacc aaacaagtcg ccataaagac ataaaaaaac tactgccatt gaaaagttta
       61 atcgatgcaa tggcagtagg ttaaaattat taatgtacat gtgcgtgatg atgagcatga
      121 tggttatgtg aatgactatg tgttcctgaa catataatcg attcatcatg tttgtgatta
      181 ggcgtttcta attgaatagt catatggtga atatttaaat gtaataaatc atgctcaatg
      241 ttttctaata ataattcaca ttctttcatt gtcaatgtat ggtctacaac aacatgacaa
      301 ctcaatgcat tcatatcatt tgaaattgtc caaacatggc aatcatgcac actttgtatt
      361 cgtgaatcct ttttaatagt agttataact tcatctatat caacatcact tggtgtgcct
      421 tccattaaaa tgttaattga agattttgtg ataccccaag cactttttaa aataataacg
      481 gaaactaaaa tacttgcgat agggtcggcg attgtccatc caaatgccca aattaaaata
      541 gctgcagtaa tggcgccaac tgaacctaat aagtctccga taacatgtag aaaagcacca
      601 cgcatattta aattgtgtga agtgtcgccg cctttaaaca taaagaatgc aacaacgata
      661 ttgacaatta aaccgataat actaatgatt aacatttctt ttgattgaac ttcagaagga
      721 acaaagaaac gtttaatcgc ttcaaaaaca atcaaaatac ttattacaaa aagcgttaca
      781 ccgttaaata acgctgcgag tacttcgaaa cgtttataac caaatgtttt tgtagttgtg
      841 gcattctttt cagcataaat aaatgcgaca agtgcaacac ctaatgagaa tgtgtcgcta
      901 aacatatgga taccgtcaga tagtaatgcc aagctgttag caaggagacc gccgatgatt
      961 tcgataaaca tatatagacc gattattaaa aacgatataa acaatacttt cttattattt
     1021 gtagttacat gactatgcat atggtcatga tgatgatgtg aatgagacat attataaccc
     1081 actttcttta ggatgattcg cgtgatgtat ggcttgcttt aacatagttg ctacgtggat
     1141 gtcatctaat gaataaatca ttgattggcc ttgtcgtttt gctttcacaa gatgcacact
     1201 tttaagtaat tttaattggt gcgagacatt tgattgagat aaattcaatt gatgtgaaat
     1261 gtgaccaaca cttgcttcac tgactgataa caattccata atacgtattc gattgtaatc
     1321 gcctaatgcc ttgaaaattt cagttacgcg ttctaatgta tctgtatgta tttctgaata
     1381 ttgttctgac attatatgac aatcctttca tatgaatatt tgttcatata ttaatttaat
     1441 acgttctcag tagtatgtca attgattttt atagttgtaa caagttttac atatctcata
     1501 aagtggtatg gcatagggaa taataaatag gagagtgttg taaatgaata ttttggttat
     1561 aggtgctaat ggcggtgtag gttcgttact agtgcaacaa ttagcaaaag aaaatgtacc
     1621 atttactgct ggtgttaggc aatccgatca acttaatgcg ttaaaatcac aaggtatgaa
     1681 agcaattctt gttgatgttg aaaatgattc aatagagact ttaactgaga cgtttaaacc
     1741 attcgataaa gttatctttt cagtaggttc tggagggaac acgggagcag ataaaacaat
     1801 tattgtcgat ttagatggtg ctgttaaatc aatgattgcg agtaaagagg ctaatattaa
     1861 acactatgtc atggtttcaa catatgattc gagacgtcag gcttttgatg atagcggtga
     1921 tttaaagcca tatacaatag ctaaacatta cgctgatgac tatttaagac gttcaggttt
     1981 gaattataca attttacatc caggggcact tacaaatgca gcaggatctg gaaagataga
     2041 agctgcacaa tattttgatg gtaaaggtga aattcctaga gaagatgttg cgacagtatt
     2101 aaaagaaatt gtcacatcca atcattttaa ttaccaagag tttcaaatta ttagtggtga
     2161 gcaggacatt aaagatgctt taactcaatt tgaaattgaa aaggattaat aaggatagta
     2221 aatatgattt gaagcgggtt acgttttcgt aactcgttat ttttttgaaa atgatgaatt
     2281 ataagtatga ataagtacgt attgtctatg cattttacaa agaatttgaa caatgtatgg
     2341 cacaactatt aaagttgttt attaattggt ataatgggcg agtaaattta aagggaaatg
     2401 tgtacaaatg taagagagag ataatctcta tgctattaat ttttaaaaat gttaaagtac
     2461 tgtaaattta agtgaagcgc tttaattggc agtactgcaa tgttagtaaa tatggtacaa
     2521 tcactaatag ttaatttgaa atgtggaaat ttataatacg atgtaaatga gaacaaaatc
     2581 aaaatataat ggaacaacaa catcagagtt ctattgctta cttaatcaca atggaggtgc
     2641 aacaatgcca ttatttttac aaccaatttt aaaaacaaaa ttatggggcg gtcaacgtct
     2701 aagtgagttt ggatatcaat tagacaatga tacaactggg gaatgttggt gtgtgtcagc
     2761 acatccaaat ggtacaagcg agattattaa tggaccatat caaggtcaaa cattagaccg
     2821 tatttggtca gaacatcgtg aattgtttgg tgatttccca agcaaagatt ttccgcttct
     2881 aactaaaata gtggatgcaa gagaatcact ttctattcat gtgcaccctg ataattctta
     2941 tgcttatgag catgaaaacg ggcaatatgg caaatctgaa tgttggtata ttatagatgc
     3001 tgaagaagat gcagaaatag ttatagggac attagcagag tctagagaag aagttgcgaa
     3061 tcatgttcaa cacggaacga tagagtcgat acttagatat attaaagtaa aacctggaga
     3121 attctatttt attccagcag gaacagtaca tactatttct tcaggaatac tagcatacga
     3181 aacgatgcaa tcgtcagaca ttacatatag actttatgat ttcaatcgtc aagataatca
     3241 atataatgat agaccgttaa atattgaaaa agctttagac gttattcagt acaatgcccc
     3301 attacctaat attttgcctg aaagtgaaat tattgaaaac cataagtgta cacacattgt
     3361 atcgaatgat ttctttacat tggttaaatg ggaaatttct ggcacgttaa attatatgaa
     3421 gcctagagag ttctgtttag ttacagtgtt ggaaggtgaa gggcaaatga ttgtcgatgg
     3481 tgaaattttc aaactgacta ctggtacaaa ctttattttg acttctgaag atttggatag
     3541 tgtctttgaa ggtgatttca cattgatgat tagctatgtg taatagtgta ataacaattt
     3601 aggagtgaat gatttgaagc aatttctata tattgcgtta gtatgtggtg tgatagcagg
     3661 tcttggtgct ttcttacata taccgcagta tccgagcatg acaattccac gtatagtagc
     3721 tattttagga attatcagtg ctatgttgac ttttaaagac aagcaaatca gcgcctcatt
     3781 aaagtttagc gcattgttaa ttaatgtgct gccattatgc ggtacctttg tagcttcaaa
     3841 ttaattgtcg atagcgcgtt tgaatataat acagtgcatt aacagaagaa atatgattgt
     3901 gttaatgaca ttgatgaaaa taaagcacat caacataacc tctcacttgc atagtagtga
     3961 gggggttttt gttggtttat ataaaatgaa gtattttata tttaatgaaa attaagacat
     4021 gctaaaattc taacggcagt atagatattt aaaaatgtgt atcaatggcg ctatagagat
     4081 aagcaagcat agtggtatca tatataaatt tgtaattttt attgcatagt gtatccaagc
     4141 atgtttttta tatgcaaaat aggtagctaa atatgttaaa ctgtttgtaa caatttttat
     4201 cattaagaca gatataataa ataaaatata gaaaactgat taaaaggtat acagtcgctc
     4261 gtatgtgtgt gtccaactgc atatagagtc gcacttgttg taaagcaaaa tagttcgact
     4321 tacttaaaag ggaaaacgtt aagggtctgg gacgtaaatt aatgtcctgg gcgctacagt
     4381 gttataggaa atgcgattaa aatcgcagtg aacaaagggt atacagttga tcgcatacgc
     4441 gtccaactgc ataagaaaca ctaaaagaat gtaattcata gtgtttctaa aatttattca
     4501 ggttaaggag tattaagatg acagcagaaa cgaattattt ttggttgaat tgtggatata
     4561 accgttggaa tcataatgaa ccgttagtag gacaaacagc tttatttgaa tcaggcgcac
     4621 attttaaccc atctcaagga tttagagcgt ttaaaaaggc taaagtagga gatcaagtca
     4681 tcttttatca agttcagacg gatactggac tacttggatg tggtgaaatt attagtgttg
     4741 aaacaggtgc acaaaataaa atacgtgtac agtttcgttt taatgaacaa ttgaaaccat
     4801 taacagcaga ttatctaaag cgtagtgaag ctttggaatt tcgtatgagt aatatgaaag
     4861 agacattgtt caaccaaatc actgcagaag agtttgattt aataagtggt cttggtaaag
     4921 gcgaaattaa gataccacgt tatttctttt tagctgaaac tgaagaattt gaacctggaa
     4981 accaatatac gatttatacg cacacgtaca acggtattaa acgtaatggt tatcattttt
     5041 atactcagtt agaagaaggc gacaatatta ttttttataa tcgaacaaaa aatcaatctg
     5101 tcgttggaat tggagaagta tcaaagcata ttcatgaaaa accaccaatt cctggtagaa
     5161 caaatagtac agtgattgaa gtgtcttatg agaaagacat tacgccgatt acattaagta
     5221 cattaaataa gcatcctaaa ttgaaaaact tatatttcct tcaagaaaat gcaaaacagg
     5281 ctattgcaag tatgtcacaa gcacagtatg atgcaattat tgaaatgagc gataataatg
     5341 gattgaaatc tccatttgaa atggttcaaa aaccagatat gcttgaaagt gaaaaagaag
     5401 aagcgttaaa gccatttatt ttacttgttg tagatcgaaa agaagaaggc ttaaaagcgg
     5461 ctaatgactt attgcaaaaa gcgaatgcaa atcctgttat aacaacaggt catcctgatt
     5521 tttcagaaga tatgctttat ggcaagtatt taccaaatga aacaggggca ttatactatc
     5581 gtgaaggatt tattactcag ttaatgccta aaaaggataa aagttattta gttattgata
     5641 attttaatcg tatagataca gacattttcc aaacgtatat taatgtgtta gaaggctatg
     5701 aggtaacatt accacgttat aataaagacg gtaatatgat taaatggtca cgacaaaaag
     5761 attctttcta ttatttcaat cctaattggc atattgtagg tattacatat gatagtttag
     5821 aggaaattaa ggagaaatat tcagagcagt ttttaaaata cacacgtata gtcaaagtca
     5881 aacatgacta atgatatatg gtagtttttg aaaagaagta aggaaagatt aaaaattgca
     5941 taattgcata tttgaataac cgtataaaga aaaaatgacg ggtaatcaac cataagagct
     6001 aattaagagc ttatgataga ttactcgttt ttattttaat aaatgataaa gacagtatat
     6061 gaatataaat gaatttatgt tactgaatta aaactttata tgagtttcca gtggtatgtt
     6121 gaataaggcg aacgactaaa cgctaagtta ataataagaa ataagattac actgtagatt
     6181 gagaaattta aagtaaataa aaaatacatt atacaataaa tataaaactg aaaaataaat
     6241 tttatggcaa tttcgtgtcg cgaggactta tcaagtgaca accttgttta aatgttttta
     6301 aattaggaaa aatgactata agtactattg aaggagcgaa taaattatgc caatcgtata
     6361 ttatgatgga aactgtatat attgttataa ctatgtcatt tggttaattc aacatgacct
     6421 accaagaaat tatcgatttg ctacgttaaa aggtgaagtt ggacaacaat tttttaaaca
     6481 acatccagaa gcggcaaata aaaatagtgt gattttacag aaaggtgatc gtatatattt
     6541 tgaatcgcag gcgattattc aactaatcac agcactacct aatcgaacta aattattggg
     6601 cgtaggttta tggcttgtac ctaaaccagt ccgtaatttc ggttatcgaa tgtttgctaa
     6661 taatagaaat agaatgtgga aaacaacatg gcaccaacca aatgattatg aaaaatcgtt
     6721 ctttttagat gataatgcga aagtaaaact tactgattga taaaacatag ttgctaattg
     6781 at
//
LOCUS       DAKPJH010000127         6566 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.127, whole genome shotgun sequence.
ACCESSION   DAKPJH010000127 DAKPJH010000000
VERSION     DAKPJH010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6566
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.127"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(281..1171)
                     /locus_tag="OY092_002334"
     CDS             complement(281..1171)
                     /locus_tag="OY092_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002478556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HCX1077255.1"
                     /translation="MNKEQLEKMKNGKGFIAALDQSGGSTPKALKEYGVNEDQYSNED
                     EMFQLVHDMRTRVVTSPSFSPDKILGAILFEQTMDREVEGKYTADYLADKGVVPFLKV
                     DKGLAEEQNGVQLMKPIDNLDSLLDRANERHIFGTKMRSNILELNEQGIKDVVEQQFE
                     VAKQIIAKGLVPIIEPEVNINAKDKAEIEKVLKAELKKGLDSLNADQLVMLKLTIPTE
                     PNLYKELAEHPNVVRVVVLSGGYSREKANELLKDNAELIASFSRALASDLRADQSKEE
                     FDKALGDAVESIYDASVNKN"
     gene            complement(1294..1710)
                     /locus_tag="OY092_002335"
     CDS             complement(1294..1710)
                     /locus_tag="OY092_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077256.1"
                     /translation="MRLKVLFHFIAAIFISFMLLWMTMLFDLISNQSHLKALLLNLDF
                     LIPSDNTPYILEIICHLLIGSVIYFIFVLLFHTSKRLYYLCYIPLFFLFIALYPFLVF
                     IAQRPIFQFSVTELIGWIITHIFFMSLIALVIPRIK"
     gene            1968..3305
                     /locus_tag="OY092_002336"
     CDS             1968..3305
                     /locus_tag="OY092_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HCX1077257.1"
                     /translation="MSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTY
                     IDLLSSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCQIAPGDF
                     EKRVTFGLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHY
                     GPLLNGFYHIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQG
                     DGGLLEPVPGYFETLEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGK
                     SLAGGMPMSAIVGRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAE
                     KGEYVRKRMDQWVSKYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHG
                     VVIIAVAGNVLRFQPPLVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW"
     gene            complement(3385..4833)
                     /locus_tag="OY092_002337"
     CDS             complement(3385..4833)
                     /locus_tag="OY092_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1077258.1"
                     /translation="MGSFFNKIARKEDPAIYQNKDGHLKRTLRVRDFLALGVGTIVST
                     SIFTLPGIVAAQHAGPAVALSFLLAAIVAGLVAFTYAEMAAAMPFAGSAYSWVNVLFG
                     EFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVKPIGIELPAALSNPFGTNGGFIDI
                     IAAIVILLTALLLSRGMSEAARMENILVILKVLAIILFVIVGLTAINVSNYVPFIPEH
                     KVTATGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEALDPQKTMPRGILGSLSVAIV
                     LFIAVALVLVGMFHYSQYANNAEPVGWALRQSGHGVVAAIVQAISVIGMFTALIGMML
                     AGSRLLYSFGRDGLLPSWLSHLNDKHLPNRALVILTIIGVLIGSMFPFAFLAQLISAG
                     TLVAFMFVSLAMYRLRKREGKDLPIPAFKLPLYPVLPAVTFVLVLLVFWGLGFEAKLY
                     TLIWFIVGIILYLSYGLRHSKKNDVAEYHPPK"
     gene            5520..6479
                     /locus_tag="OY092_002338"
     CDS             5520..6479
                     /locus_tag="OY092_002338"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HCX1077259.1"
                     /translation="MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVK
                     ADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIM
                     KSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLIS
                     QELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTR
                     DAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPT
                     LVNQHGAVKIYEMPLSAEEQALFDKSVKTLEDTFDSIKYLLED"
BASE COUNT         2291 a         1049 c         1165 g         2061 t
ORIGIN      
        1 gtgaatcatt aattgaagac gaaaaattaa tgagaaaaat ccgtaaacaa acttcaaaag
       61 acttagaatt aggttactac gaaaactaaa ttctaatagc tatatttaaa atcgggcaac
      121 tgagaaatct tatagatttt tcagctgtcc gattttttac gtaatctaat acatacggca
      181 aaatcaactt taatcaaaaa agactcatac acaatgccct taaagcacat gtatgagtcc
      241 attttagtag tttatatcaa aaaatagttt aatgtataaa ttagtttttg tttacagatg
      301 cgtcgtagat tgattctaca gcatcaccta aagctttatc gaattcttct ttagattgat
      361 cagctcttaa atcactagct aatgcacgtg agaaacttgc gataagttca gcgttatctt
      421 taagtaattc atttgctttt tctctgctgt aaccacctga taatacaacg acacgaacaa
      481 cattaggatg ttcagctaac tctttgtata agtttggttc agtaggaatt gttaatttca
      541 acattactaa ttgatcagca tttaagctat ctaaaccttt tttaagttca gcttttaata
      601 ctttttcaat ttcagctttg tcttttgcat taatattaac ttctggttcg ataattggaa
      661 ctaaaccttt agcaataatt tgtttagcaa cttcaaattg ttgttcaaca acgtctttga
      721 taccttgctc atttaattct aaaatgttag aacgcatttt tgtaccaaaa atgtgacgtt
      781 cgtttgcacg gtctaataaa ctgtctaagt tgtcgattgg tttcattaat tgaacaccat
      841 tttgctcttc agcaagacct ttgtctactt ttaagaacgg aacaacacct ttatcagcta
      901 agtaatctgc agtgtatttg ccttctactt cgcgatccat tgtttgttcg aaaagaatag
      961 cacccaaaat tttatctggt gagaatgaag gtgaagttac cacacgtgta cgcatatcgt
     1021 gaacaagttg gaacatttcg tcttcattgc tatattgatc ttcgtttaca ccatattctt
     1081 taagtgcttt tggtgtacta ccaccacttt ggtctaatgc ggcaataaag ccttttccat
     1141 ttttcatttt ttctaattgc tctttattca tactttccac tccttaactt ttcaatacac
     1201 ctccagtatg ataaaaatga gaacatttct caagtcataa accttgaaaa gtgtataaaa
     1261 tgtgaaaaat aattgtcagt ttaattaaaa atattatttt attctaggta tgactaacgc
     1321 tattaatgac ataaagaaaa tatgtgtaat aatccaaccg attaattctg tcacactaaa
     1381 ttgaaaaatt ggacgttgcg caataaatac taaaaaggga tacaatgcta taaataagaa
     1441 aaataaaggg atataacata gatagtaaag ccttttagaa gtatgaaaca gcaacacaaa
     1501 tataaaataa atgacgctac caattagtaa gtgacatatt atttctagaa tatatggtgt
     1561 attgtcagaa ggaattagaa aatctaaatt caataataaa gcttttaaat gtgattgatt
     1621 gcttattaag tcaaacaaca tggtcatcca tagcaacatg aatgatatga aaatagcagc
     1681 aatgaaatgg aacaatactt ttaaacgcat tcgtatcacc tcagagtcaa atgaaatata
     1741 gtaaacaatt ccctaatcga acaaaattat gcgcataaac aaagtagatt gatataaaat
     1801 tcttaattat cagaatatat ttacaaatct gaattttatt agtatattgg atagtattca
     1861 tagaggcatg acggtatttg agcaggattt taaatcggat tttataatcg atttaagaga
     1921 ggccactttg cttgcacatt aatactgtca atgggagggg aatgtatatg agtaaagcac
     1981 atcaattaat tcaagaggat gaacattatt ttgcgaaatc aggacgtatt aaatattatc
     2041 cgttagtgat tgatcatgga tatggagcaa cattggttga tattgagggg aagacatata
     2101 tcgatttgtt atcgagtgcg agttctcaaa acgtaggtca tgcacctaga gaagtaacag
     2161 aagcgataaa ggcacaagtt gataaattta ttcattatac accagcatat atgtatcatg
     2221 aaccgttggt acgtttagct aagaagcttt gtcagattgc acctggagat tttgaaaaaa
     2281 gagtgacctt cggattaacc ggatcagacg caaatgatgg catcattaaa tttgccagag
     2341 catatacagg gcgtccttat atcattagtt tcactaatgc atatcatggt tcaacttttg
     2401 gctcattgtc tatgtcagct attagtttaa atatgcgcaa acattatggt ccattattga
     2461 atggttttta tcatattccg tttccagata aatatcgtgg tatgtacgag cagccacaag
     2521 ctaattcagt agaagaatat ttagcaccct taaaagaaat gtttgcgaaa tatgtacctg
     2581 ctgatgaagt agcatgtatt gttattgaaa cgatacaagg cgatggtgga cttttagaac
     2641 cagttccagg gtattttgaa acgttagaaa agatttgtcg tgaacatggt attttaatcg
     2701 ctgtcgatga tattcaacaa ggttttggga gaacaggtac atggagttca gtctcgcatt
     2761 ttaattttac gcccgattta atcacttttg gaaaatcctt agcaggtggt atgcctatgt
     2821 cagcaattgt tggacgcaaa gagattatga attgtttaga agcgccagca catttattta
     2881 caacaggtgc taatccagtt agttgtgaag ctgcattagc cacaattcaa atgattgaag
     2941 atcagtcgct tcttcaggct agtgcggaaa aaggggaata tgttaggaaa cgaatggatc
     3001 aatgggtatc taaatacaat agtgtaggcg atgttagagg taaaggtctg agcattggta
     3061 ttgatattgt ttccgacaaa aaactcaaaa cacgtgatgc cagtgcggca cttaaaattt
     3121 gtaattactg ctttgagcat ggcgtagtta ttatagctgt agcaggaaat gtgttgcgat
     3181 tccaaccgcc attggtaata acatatgagc aattagacac ggcgttaaac actatagaag
     3241 atgcactgac tgctttggaa gcaggtaact tagatcaata tgacatatct ggacaaggtt
     3301 ggtaatagcg attatcttaa tataaaataa aaaatcattt ccacatctgg atgttaatca
     3361 gatgggaaat gatttttttg atttttattt tggtgggtgg tattcagcta cgtcattttt
     3421 cttagaatgt ctaagtccat aacttaaata tagaatgata ccaacaataa accaaattaa
     3481 agtgtataat ttcgcttcga atcctaatcc ccagaatact agcaatacta aaacaaatgt
     3541 aactgctggt aacacaggat ataaaggtaa tttaaatgca ggaattggta gatctttacc
     3601 ttcacgcttt ctcaaacgat acattgctaa tgaaacgaac ataaatgcaa caagtgtacc
     3661 tgctgaaatt aattgtgcta aaaatgcgaa tgggaacata gaaccaatta aaacaccaat
     3721 aatagtaagt ataactagtg cgcgattagg taaatgtttg tcgtttaaat ggcttaacca
     3781 tgaaggtaat aagccgtcac gtccaaatga ataaagtaaa cgtgagcctg ctaacatcat
     3841 accaattaat gctgtaaaca taccgattac agagatagct tgaacaatag ctgctacaac
     3901 accatgacca ctttgacgta aagcccaacc aacaggttca gcattgtttg cgtattgtga
     3961 gtaatggaac ataccaacta acacaagtgc tacagcaata aataatacga tagcaacact
     4021 taaagaacca agaatacctc taggcattgt cttttgaggg tcaagtgctt ctgctgagtt
     4081 tgctgcgata gaatcgaaac cgatatacgc taagaaaatc attgaaacac cagcatatat
     4141 gccttgccaa ccaccaaagt cacctgtagc agttactttg tgttctggaa taaatggcac
     4201 atagttacta acatttattg ctgttaaacc tacgatgaca aataaaataa tagctaatac
     4261 ttttaaaata actaaaatat tttccatacg tgctgcttct gacataccac gtgatagtaa
     4321 taatgcagtt aataaaataa cgatagcagc aataatatcg ataaaaccgc cattcgtacc
     4381 aaatggattt gataatgctg ctggtaattc gatgccaatt ggtttcacaa gtccgcgtaa
     4441 attcgctgag aatcctgatg caacaaaggc tacggcgata aaatattcag ctaatagagc
     4501 ccaaccggca acccatccaa agaattcacc aaataataca ttgacccaag aataggctga
     4561 acctgcaaat ggcatagcgg cagccatttc tgcataagta aatgcaacta aaccagcaac
     4621 aatagctgcg agtaagaatg ataacgcaac tgccggccct gcatgctgtg cagcaacaat
     4681 gccaggtagc gtaaagatag atgtcgatac aattgttcca acacctaaag ctaagaaatc
     4741 acgcacccga agtgtacgct ttaaatgacc atctttattt tgatagatag ccggatcctc
     4801 ttttcgtgct attttattga aaaaacttcc cataaacttt cctcccaaac attcataaac
     4861 aattctatac ggtgtttttt aatatgttat atcatagcac aaataatcaa tattttgtct
     4921 aaaaattctg aaaaatcaca actttatgtt acgtattaat gacttgtctt gataacatcc
     4981 gtagattttt taaatgataa aactgattat aacagatatt aaatgaataa gtactatttt
     5041 ttgctaattt tctaacaatt ttgcacatta tatttttaaa atcaatttca tgtttatgtc
     5101 tgattggtta gtgtgtatga aatgtaattc tttgactata aaaagatgca tcaaatatga
     5161 tgagggtaag gcggaaaata ggaggttata tagtaagtca tttaagtcga atagccatcc
     5221 tttttaaatt gaaaaaaata gaaagctcaa tagtttgtta aagcctttaa atagcgtcat
     5281 tatgcaattt tagaatgcta aaaattgtca caaatttcaa attacgtgct aaagcttgag
     5341 atatcaatat ttattggcga tagagtgtaa tttgactccg cttacatctc agttttatgt
     5401 ttgtaatttg gtagcataat attataataa aataaaattg ttaatcttta atttcagtat
     5461 agatattttt acgtgtagtc acgtgtaaaa taaattcaat taggttagga gacataatta
     5521 tgaaaacatt tggtaaaaag gttgtattaa tcggagatgg atctgtagga tcaagctatg
     5581 cctttgcaat ggttacgcaa ggtgttgctg atgaatttgt aattattgac attgcaaaag
     5641 acaaagtaaa agcagatgtt caagatttaa accatggtac agtccacagt ccttcaccag
     5701 ttgatgtgaa agcaggtgaa tacgaagact gtaaagatgc agatttagtt gttattacag
     5761 ctggtgcacc tcaaaagcca ggtgaaacac gtttacaatt agttgaaaaa aatactaaga
     5821 ttatgaagag cattgttaag agtgtaatgg atagcggctt tgatggatat ttcttaatcg
     5881 cggcaaaccc tgtagacatt ttaacaagat ttgtaaaaga atatactgga ttgccagcag
     5941 agcgtgttat cggttcaggt actgtattgg acagtgcacg tttacaatat ttaattagcc
     6001 aagaacttgg tgttgcacct tcaagtgttg acgctagtat tattggtgag catggtgata
     6061 ctgaacttgc agtttggtca caagcaaatg tagcaggtat ttcagtatat gacacattaa
     6121 aagaacaaac tggtagcgaa gctaaagcgg aagaaattta tgtaaataca cgtgacgctg
     6181 cttatgaaat tatccaagct aaagggtcaa catactatgg tattgcatta gcattgatgc
     6241 gcatttcaaa agccatttta aataatgaaa ataatgtctt aaatgtttct atacaattag
     6301 atggtcaata tggcggtcac aaaggcgttt acttaggtgt accgacattg gttaaccaac
     6361 atggcgcagt taaaatttat gaaatgccat taagtgctga agaacaagca ttattcgaca
     6421 aatcagttaa aacattagaa gatacatttg attcaattaa atatttatta gaagactaag
     6481 cctattttaa gtattaatta gaaatatatt aatggtaaga ggatctatta gtgttgcagt
     6541 aacacgtggc actgatagat ccattt
//
LOCUS       DAKPJH010000128         6477 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.128, whole genome shotgun sequence.
ACCESSION   DAKPJH010000128 DAKPJH010000000
VERSION     DAKPJH010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6477
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.128"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(198..551)
                     /locus_tag="OY092_002339"
     CDS             complement(198..551)
                     /locus_tag="OY092_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HCX1077260.1"
                     /translation="MISIILVMIGGGLGAIARSAVTDYFNHKFTSKLPIATLIVNLVG
                     SFLIGLTIGLSISISWFPAFFVTGFLGGLTTFSTLAKELTLMMMPKFNINLFLNYSLL
                     QFIIGFIACYIGYHI"
     gene            complement(548..913)
                     /gene="crcB"
                     /locus_tag="OY092_002340"
     CDS             complement(548..913)
                     /gene="crcB"
                     /locus_tag="OY092_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HCX1077261.1"
                     /translation="MQYVYIFIGGALGALLRYLISFLNTDGGFPIGTLIANLTGAFVM
                     GLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYAITS
                     YVFGILLCYVGIKLGGGLS"
     gene            complement(1169..1471)
                     /locus_tag="OY092_002341"
     CDS             complement(1169..1471)
                     /locus_tag="OY092_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077262.1"
                     /translation="MSRSKKYFYLSSLMIILSFFFNTNNVFLSGLFNSFIKLILFCSV
                     INSIILILSIIFADRSIKSLKPDADWIRIASKSLPWIILIVILVHIFSIVHTFGFI"
     gene            1730..2443
                     /locus_tag="OY092_002342"
     CDS             1730..2443
                     /locus_tag="OY092_002342"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCX1077263.1"
                     /translation="MAKLNVEVFADGADIEEMKAAYKNKQVDGFTTNPSLMAKAGVTD
                     YKAFAEEAVKEIPDASISFEVFADDLETMEKEAAILKQYGENVFVKIPIVNTKGESTI
                     PLIKKLSADNVRLNVTAVYTIEQVKEITEAVTEGVPTYVSVFAGRIADTGVDPLPLMK
                     EAVKVTHSKDGVKLLWASCRELFNVIQADEIGADIITCPADVVKKVNTNLGRDINELS
                     VDTVKGFAKDIQSSGLSIL"
     gene            complement(2840..3460)
                     /locus_tag="OY092_002343"
     CDS             complement(2840..3460)
                     /locus_tag="OY092_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HCX1077264.1"
                     /translation="MFSRNNNIFVDDLSVTKDNYLIAVLKMLVIFLVINYGTDVSYDH
                     EYVGLFIILLGVVLLKVLNINLLSFKKLKFTHMLYIIFGFLLMYGLDYLYDMFAPPTL
                     NEILLDEESEDAPYHIALLSTAIIPPITEEIICRGLIIRILFRNHLFLGFIVSTVFFT
                     LIHESDTLIGYLPYFYSGLIFGYTYLKTKRLEVPILIHFINNLLAM"
     gene            complement(3627..4262)
                     /locus_tag="OY092_002344"
     CDS             complement(3627..4262)
                     /locus_tag="OY092_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001168910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HCX1077265.1"
                     /translation="MQKFKDLFYDDLSVARGNYFLTLLYAFLITIILLIGFVVSDTHI
                     LYGMFIVLIGIVLLRLFKINLLSFKKLTMSQVIYIIGGALLIYGLDHLYLHFHDVPTN
                     EQELDRELQHTPLYMSIVTIAIIPAIVEEIVFRGMIIRVVFRKHLFIGLVVSSLVFAS
                     LHESDTWIGYLPYLYSGVIFGLIYLKTKRLEVVILIHFINNLSSLLILIWG"
     gene            4560..5003
                     /locus_tag="OY092_002345"
     CDS             4560..5003
                     /locus_tag="OY092_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077266.1"
                     /translation="MNKASFDKKVKKQLWFLNKKEKHALDQRLSSITDKDNVNFNKPI
                     TFANAYLRENVFRSKETKSYSIFVTLVVMMFAYVALLGLFLFGLITSLSGVQFFVNPK
                     VELSTTVVILTIIGAILLMLVSIYLIKITTSYFTKKLIEHKFNGH"
     gene            complement(4990..5433)
                     /locus_tag="OY092_002346"
     CDS             complement(4990..5433)
                     /locus_tag="OY092_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001152695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HCX1077267.1"
                     /translation="MQDISTKHLLYIQTATSNHLETKCVFLYHEYNLEFPITKAIPYY
                     AKLHFTSASILIDAAKSILNINKLVPIYLNPKTILFPIKQKRAPIQTYINAHYVIGMT
                     EMGNSTMLHFKNGKTLEVDEPMSLISKKCHESLALKHFIENTNDH"
     gene            complement(5546..6016)
                     /locus_tag="OY092_002347"
     CDS             complement(5546..6016)
                     /locus_tag="OY092_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000671059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HCX1077268.1"
                     /translation="MKFNDVYNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQI
                     YKPSSKQSLSSFLFMRLNFYLIDLFRQQKRLNDIILYENHSPILTEQPIYFNEFNLNL
                     QDVCALLNHRERQWLMLYLEGYKQYEIADIMSLSTSTIKLIKASVKRKCQRFFK"
     gene            6215..6439
                     /locus_tag="OY092_002348"
     CDS             6215..6439
                     /locus_tag="OY092_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077269.1"
                     /translation="MDYAHLNLEHFFARNDDLDVIRDRADFVMINNFTNEMMYRDGQI
                     EGTIDLNQYYYKNRSNAASFIMMDYKKETK"
BASE COUNT         2411 a          861 c         1061 g         2144 t
ORIGIN      
        1 gggatttatg tcccagcctg ttttattttc gactagtttg gagaatttat tgacattcac
       61 attatttaaa cggtaacaaa gattattgaa atttggtagg cattttatgg tgctaaaaaa
      121 tttgcatgaa aataaaaaaa tgcttcgttc aggaaggtgt cgtaatttgc ctatttgctg
      181 aatgaagcat tttattttta aatatgatag ccaatataac aagctataaa tccaatgatg
      241 aattgtaaaa gtgaataatt gagaaaaagg ttaatattaa attttggcat catcattagt
      301 gtaagttcct tggctaacgt tgagaaagtt gttaagccac ctaaaaaacc ggtaacaaag
      361 aacgcaggga accatgagat tgaaattgat aagcctatag ttaatccaat taaaaaacta
      421 ccaacaagat ttactatcaa tgttgcgata ggtaacttgg aagtaaattt atgattaaaa
      481 taatcagtaa cggcacttct agcaattgca cccaaaccgc cgccaatcat gactaaaatg
      541 attgatatca tgataaacca ccacctagtt ttataccgac gtaacataac aaaataccaa
      601 agacataact tgttatagca tatagtagta aagttataaa ttgttgatga tcaaacatat
      661 gtattaattc taattgaaat gttgaaaaag tcgttaatgc accaagaaaa ccagtcgtaa
      721 tagctttttt tagggtcgga tggtttgaaa aaaatgcaat tgttaaggct gttagcaatc
      781 ccattacaaa ggcaccagtc aaattggcta tcagtgttcc gattggaaaa cctccgtcag
      841 tattcagaaa agaaatgagg taacgtaata aagcgcctaa agcaccaccg ataaaaatat
      901 atacatattg catttggttc acctcgaaaa gaagtagttt gaatttaaaa aagaggtttt
      961 ggcaacgcga cgacaaaaat tgtcgatgca ttatcaaacc tcattatatg ttatatcttg
     1021 ttgtataact atagcgatta gatgcatagt tatgatttcg aaaatctaat attttttaaa
     1081 cgcaacaaca tcatcaaatt gatttactca ttatagcatg atgcattgta ttgttttgta
     1141 ttaaggctac attgacattt tatctttttt aaataaaacc gaatgtgtga acaatcgaaa
     1201 agatatgtac taaaataacg attagaataa tccaaggcaa acttttactc gcaattctaa
     1261 tccaatccgc atcaggcttt agtgatttaa ttgaacgatc tgcaaaaatt atagacaata
     1321 ttagtataat tgagttaata acactgcaga aaagtattaa tttaataaaa gaattaaaaa
     1381 gcccacttag gaaaacgtta tttgtattaa agaaaaagct taaaataatc attaagctag
     1441 ataagtaaaa gtattttttt gaacgagaca tgctagacct cctggatggt tatcatttac
     1501 atatcgtatc ataaacaatc ataaaacaat agtttaatta ccatgttgac acaatgttgc
     1561 taaagtcttt tttaagaaat ctaggcaaaa aattagctat atattataaa agcgtgatat
     1621 aaatgtttta tataacaaag aaataaaaat cattttttac aaatggttgt aagaaaaaga
     1681 catgcagatg ttgttaaaat tttaataaga atcaaggagg ctatattata tggctaaact
     1741 aaatgtagaa gtatttgcgg atggtgcaga tattgaagaa atgaaagcag cttataaaaa
     1801 caaacaagtg gatggtttta caacaaatcc tagtttaatg gcgaaagcgg gcgtaacaga
     1861 ttacaaagct tttgctgaag aagctgtaaa agaaattcca gatgcttcaa tttcatttga
     1921 agtatttgca gacgatttag aaactatgga aaaagaagca gcaattttaa aacaatatgg
     1981 cgaaaatgta tttgttaaaa ttcccattgt aaatacaaaa ggtgaatcaa cgattccttt
     2041 aattaaaaaa ctttcagctg acaatgtgag attaaacgtt acggctgttt acactattga
     2101 acaagttaaa gaaataactg aagcagtaac tgaaggtgtg ccaacatatg tttcagtatt
     2161 tgcaggacgt attgcagata caggcgtaga tccattacca ttaatgaaag aggctgtaaa
     2221 agttacgcat agtaaagacg gcgttaaatt attatgggca agttgccgcg aattattcaa
     2281 tgtgattcaa gctgatgaaa ttggtgcaga tattattaca tgccctgcag atgttgtgaa
     2341 aaaagtgaat acaaacttag gtcgcgatat taacgaatta tcagtagata cagttaaagg
     2401 ctttgcgaaa gatattcaat cttcaggtct ttctattcta taatatataa atatatttaa
     2461 accctcatag gcattgtgct tatgggggtt tttcatattg gagtcaattt taaactaata
     2521 tgtatttcat tgcctgtaga atttcttttc gaaattctct gtgttggggc ccctataatt
     2581 gaaaagcgta ttatcattca gtcaatgact gctaatataa cagtatagag agtctgggat
     2641 aggctcaata actataataa atagctatga aaaaatctat cgtcatagat ttttttcata
     2701 gctaaactta atatgttttg ttgttttgat ataattacag aacgtaaata tgcaataaca
     2761 tttggaaagg cacctattaa tactttgtaa aagctttggt gtcatcatgt aaatatcaaa
     2821 ataattaatg attttactgt tacatggcta agaggttatt gataaaatgt attaaaatcg
     2881 gtacctctaa tcgttttgtt tttaagtaag tatagccaaa aattaaacct gaataaaaat
     2941 acggaagata accaatcagc gtgtctgatt catgtattag cgtgaagaat acagttgaaa
     3001 caataaaacc taagaaaaga tgatttctga ataaaattcg tataatcaat ccacgacaga
     3061 tgatttcttc tgtaattggt ggaatgatag cagtactaag cagagctatg tggtaaggtg
     3121 catcttcaga ctcttcatct agcaatattt catttaatgt aggcggtgcg aacatatcat
     3181 ataagtaatc taatccatac atcaacaaaa acccaaatat aatataaagc atatgagtga
     3241 attttaattt tttgaaagat aataaattga tatttaaaac tttaagaagt acaacaccta
     3301 gtaatataat aaatagccca acatactcat ggtcataact gacgtctgtt ccataattaa
     3361 ttactaaaaa aatgaccaac atttttaaaa ctgcaattaa ataattgtcc tttgttacag
     3421 acaaatcatc aacaaaaata ttgttattcc tcgaaaacat attaattctc ctaaaataaa
     3481 gtttgacgtt taatttttat gaaaattaag ttaattatac aagatttttt attgttttaa
     3541 aagcttgcat atcattaatt tgtattgcat atcgttttgt gaattacatg ttgaggggca
     3601 atcattgtgt attatatcaa ctagtattat ccccatatca gaatgagtaa tgaggatagg
     3661 ttatttataa agtggattaa aataacgact tctaatcgct ttgtttttaa atatattagg
     3721 ccaaaaatca ctccagaata taaataaggt aagtacccaa tccaagtatc cgattcatgc
     3781 aatgatgcaa acactagact agacacaact aatccaataa ataaatgctt tctaaataca
     3841 actcttatta tcatgcctcg aaaaacgatt tcttctacaa tggcagggat aatagcaatt
     3901 gtgacaatag acatatacaa aggcgtatgt tgtaattctc gatctaattc ttgttcattt
     3961 gtaggtacgt catgaaaatg taaataaaga tgatctaacc cataaattag caatgcacca
     4021 ccgatgatat aaatcacttg tgacattgtt aattttttaa atgagagtaa attaattttg
     4081 aataaccgta ataacacgat accgatgagc actataaaca tgccataaag tatgtgtgta
     4141 tcactgacaa cgaagccaat tagtagaata atagtaatca agaatgcgta taataaagtt
     4201 agaaaataat ttccacgtgc aactgataaa tcatcataaa acaaatcctt gaatttctgc
     4261 atatttaatc ctttctatca tctataaaat gaatattaaa gcatttcatt ggtatgttca
     4321 ttttcattat atgagaaact tagatatgat taaaggcgca tcattacact taactaaaaa
     4381 catttgtttg caatataaat ggtgtcaatt atacagtgtc aaattactaa aaataaaatt
     4441 gcaaagttaa tttttgtaga tttgatgcat gtatttctgt aaaatatata aaatacaatg
     4501 ttcattggca atcatgtata aaatagcgtc aatatgaaaa aggagagaaa tccttaatta
     4561 tgaataaagc atcgttcgat aaaaaggtta aaaagcaatt atggtttttg aacaaaaagg
     4621 aaaaacatgc attagatcaa cggttgtcta gtattactga caaggacaat gtgaacttta
     4681 ataagccaat cacctttgct aatgcgtact taagagaaaa tgtatttcgt agtaaagaaa
     4741 ctaaaagtta tagcatcttt gtaacattag tagtgatgat gtttgcatac gttgctttat
     4801 taggtttgtt tttattcgga ttaattacaa gtctatctgg tgtgcaattt ttcgttaatc
     4861 ctaaagtaga attgtcgaca acggttgtta ttttaacaat cattggggcg attttattaa
     4921 tgttagttag tatctattta ataaaaatca caacatcata ttttacaaag aaactgatag
     4981 aacataaatt taatggtcat tagtattttc aatgaaatgc ttcaatgcta aactttcatg
     5041 gcattttttt gaaataagag acatgggttc atcgacttct aatgttttgc catttttgaa
     5101 atggagcata gttgaattgc ccatttccgt cataccaatt acatagtgtg cattgatata
     5161 tgtttgtatc ggtgcacgct tttgttttat tgggaaaaga atcgttttcg gattaaggta
     5221 aataggcacc agcttgttaa tgttgagtat gctttttgct gcatcgatta aaattgatgc
     5281 tgatgtaaaa tgcaatttag cataataagg aatggcttta gtaataggga attcgagatt
     5341 gtactcatgg tacagaaaga cacattttgt ctcaagatgg ttcgaagttg cggtttggat
     5401 ataaagtagg tgttttgtag aaatgtcttg caaatatagt actccttttc aatcagttaa
     5461 taataaaatg gttcgcaaaa atgaaatgca tattattgag cgttccaaga gtattaatca
     5521 ttttaatcaa cacgacacgt cgcatctatt taaaaaaacg ttggcattta cgcttaactg
     5581 atgccttaat taatttaatt gttgaagttg ataatgacat aatatcagca atttcatatt
     5641 gcttatagcc ttcaagataa agcataagcc actgtcgttc cctgtggttt agtagggcac
     5701 aaacatcttg taaatttaag ttgaattcat taaaataaat tggctgttca gtaagtattg
     5761 gtgaatgatt ttcatataaa atgatatcat ttaaacgttt ttgttgtctg aatagatcga
     5821 taaggtaaaa gtttagtcgc atgaataaaa aagaggataa agattgcttg cttgagggtt
     5881 tatatatctg actcaattgc cacattttta tcaagagtag ttgataatac tcatcataat
     5941 tatagctaat attatatttt tttaaaagat ggtgtatgat tttgtggtgt ttgttgtata
     6001 cgtcattaaa tttcaagtag tcattctcca agttatacgt ataacaaata tttccggata
     6061 aagttagaat aaaatattta gaaaaatcat tcatttgcgt aatcgctaaa ttaagtgtta
     6121 aatataagac ataagtaatt aatttaatgt gatatgatgt attattactt tgctaaatag
     6181 tagatagaac aaaatttgta atcgggaggt aacaatggat tacgcacatt taaatttaga
     6241 acattttttt gcacgaaacg acgatttaga tgttataaga gatcgcgctg atttcgtgat
     6301 gataaataat ttcactaatg aaatgatgta tcgtgatggt caaattgaag gtacgattga
     6361 tttaaatcag tactattata aaaatagatc aaatgcagca agttttatta tgatggatta
     6421 taaaaaagaa actaagtaaa cgaacaagag aattttttgt tttttaatac gtgaata
//
LOCUS       DAKPJH010000129         6445 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.129, whole genome shotgun sequence.
ACCESSION   DAKPJH010000129 DAKPJH010000000
VERSION     DAKPJH010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6445
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.129"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..706)
                     /locus_tag="OY092_002349"
     CDS             complement(<1..706)
                     /locus_tag="OY092_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077270.1"
                     /translation="MYDFLEYLHRYCVKSINNWEAVADISCKVVREKVSKGYYVKQDS
                     VVIDDNDIPSIIKISGNYVAADILVTRYLDGMGEFIKVSELDQSSYYEWFMFVEETRR
                     IFRGTEIVYRFLKYLFTHTYEHKNEEQKIEKYMKNIIIDNHFRGGHSNDIVRLDMKDD
                     NVLFYNFDIYDTNILYEKIDEEKLLRILDEISNTDNYKALFNIVSENQKKFWKSNIKP
                     IVSECLEDINTIPFDLY"
     gene            878..1174
                     /locus_tag="OY092_002350"
     CDS             878..1174
                     /locus_tag="OY092_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000273824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1077271.1"
                     /translation="MTYNQKDDFKELKRRILGIVFDLPEGQTFTFHDLNSRANVQCSK
                     AVQQNVGRWFAYFVKHAPRIPFVIIGKNTHGHLVYLKTGPNPYNNSNPSKGGVR"
     gene            1174..2967
                     /locus_tag="OY092_002351"
     CDS             1174..2967
                     /locus_tag="OY092_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002469147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HCX1077272.1"
                     /translation="MTQTNPSFNPSPRYKSKKGWYKDKPPKEKGGMPTEVEIAGPIVI
                     ENKFIDPKTNTEKVIITDEDQKEIVESSDILTTQKLPSLMKYGFSINEKYTKDLGYAL
                     QQMRNQLPISYLYEGVGILETPFGPIVSLSEIYTTKEFDNKSPSDAICDNAYDLTPKG
                     TFDNWFNMYLKEVKGSLLLELAVVFGISALVTSFLKHKHETEFAGIIFSFTGQSSTGK
                     STAASLAVSVAGNPTKGNETLFRNWNATRNALEGYLSNNFGIPIVFDELSSATFRDTT
                     GLLYSITEGQGRQRSNVHGEVKTPKNWGTSVISTSEHSIFNDSAQNDGLRVRTIEINE
                     QFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDDKS
                     NTGNRMFKRYAVITTSAKILGRVLATDIDIAKIRDYFIDYHGHTISERSLADKAIDVI
                     IQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKIIANVFKQMLNNHQFQDVNNV
                     VNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLLQ
                     NWTPSNDNKAAKELFKSANEGIGPSGVHEDF"
     gene            3201..4550
                     /locus_tag="OY092_002352"
     CDS             3201..4550
                     /locus_tag="OY092_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCX1077273.1"
                     /translation="MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQ
                     SGRKDNRSGYRQITQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVH
                     DGYFDMDQAFDRLKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYDYH
                     HGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYC
                     GRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQTKQTSSDNQLKQKIKCPCCNATLT
                     NMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKI
                     KSAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSING
                     HQIQHIIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA"
     gene            4572..6200
                     /locus_tag="OY092_002353"
     CDS             4572..6200
                     /locus_tag="OY092_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001186610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCX1077274.1"
                     /translation="MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFE
                     VKDIYADRGISGKSMNRPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLH
                     KQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGN
                     LPLGYDKIPDSKHELMINQHEANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPF
                     SISSITYILANPFYIGKIQFAKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQ
                     MRKKQVSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNF
                     RNKGSKVCSANSVRADVIEDYVMKQILEIVKSDKVIQRVVTHVNQENQVDGAALHHDI
                     AYKQQQYDEVQIKINNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNE
                     DKTLFDAKEISKLLQHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKKQFYVTLKL
                     NNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYLTI"
BASE COUNT         2389 a         1143 c         1004 g         1909 t
ORIGIN      
        1 catataaatc aaatggtatc gtatttatat cttctaaaca ttcacttact attggcttaa
       61 tatttgattt ccaaaatttc ttttggttct cacttacaat gttaaatagc gctttgtaat
      121 tgtcagtatt acttatttca tctaaaattc taagtaattt ttcctcgtct attttttcat
      181 aaagaatatt tgtatcgtat atatcaaaat tataaaataa cacattatca tctttcatat
      241 ctaaacgaac tatatcatta ctatgccccc ctctaaaatg attatctatg ataatattct
      301 tcatatattt ttctattttt tgttcttcgt ttttatgttc ataggtatgc gtaaatagat
      361 attttaaaaa tcgataaact atttctgtac ctctaaatat tcttctagtt tcttcaacaa
      421 acataaacca ttcgtaatag ctcgactgat ctaattctga tacctttata aattcaccca
      481 ttccatctaa atatctagta actaatatat ctgctgctac ataatttcca cttattttaa
      541 taattgaagg tatatcatta tcatcaatta caacgctatc ttgtttaaca taataacctt
      601 tactaacttt ttcacgtaca actttgcatg atatatctgc aacagcctcc caattattaa
      661 tcgattttac acaataacga tgtaaatatt ctaaaaaatc atacactttg gttacctctt
      721 ttctaatttg tcaagcgaaa agtcttgcaa ttatatgttc gtcttttgct caatactatt
      781 cgagcaataa agacagtaca tctctattat aagcaatgta atcttctgaa aaaaaccaga
      841 agatagactt aattaataat atttgggagg aactcatatg acttacaatc aaaaagatga
      901 ttttaaagag ttgaaaagaa gaattttagg aattgtgttc gatttacctg aggggcaaac
      961 gtttacattt catgatctga acagtcgtgc aaatgtacaa tgctcaaaag ctgtacaaca
     1021 aaatgtcgga cgttggttcg cgtactttgt aaaacatgcg ccacgtattc catttgttat
     1081 tattggtaaa aatactcatg gacacttggt ttatcttaaa acagggccaa atccatataa
     1141 taacagcaac ccttcgaaag gaggtgttcg ctaatgactc aaactaaccc ttcatttaat
     1201 ccttcaccac gatacaaatc aaaaaaaggt tggtataaag acaagcctcc caaagaaaaa
     1261 ggaggaatgc ctactgaagt tgaaatcgca ggtcctatcg ttatcgaaaa taagtttatt
     1321 gaccctaaaa ctaacactga aaaagtaatt attacagacg aggatcaaaa agaaattgtt
     1381 gaatctagtg atattttaac aacacaaaaa ctgccatctt taatgaagta tggatttagt
     1441 attaatgaaa aatatacaaa agatttaggt tatgcgttgc aacaaatgcg caatcaatta
     1501 cccatttcct acttatatga aggggtaggt atactggaaa caccgtttgg tcctattgta
     1561 tcgttaagtg aaatctatac tactaaagaa tttgataata aatctccatc tgacgccatt
     1621 tgtgataatg cttatgactt aactcctaaa ggtacatttg ataattggtt taacatgtat
     1681 ctaaaagagg ttaaaggttc tcttctttta gaattagcag tcgtatttgg tatttctgcc
     1741 ttagtgacga gtttcctgaa gcacaaacat gaaaccgaat ttgccggaat catttttagt
     1801 tttacaggtc aatcctcaac cggtaagtca actgcagctt ctttagctgt atcagtcgct
     1861 ggtaacccta ccaaaggtaa tgaaactctc tttagaaatt ggaatgccac acgtaatgca
     1921 cttgaaggtt acttgagtaa caattttggt atacctattg tatttgatga actctcatca
     1981 gcaactttta gagatacaac ggggttattg tactccatca ctgaaggtca aggtcgtcaa
     2041 cgttcaaacg ttcatggaga agttaaaacg cctaagaatt ggggtacttc tgtcatttca
     2101 acgtcagaac acagtatttt taatgattca gctcaaaacg atggattacg tgtaagaacc
     2161 atcgagatta atgaacaatt cactacaaat gcgaccaatg ctgacaatat taaaaaagct
     2221 gtagcactaa actatggtca tgttttaccg ttagtagcta aatatcttat aaatcgtgaa
     2281 gatgaagtta ttcaatggtt ttacaaggaa gtagattggt ttgaagctaa attgaaagat
     2341 gataaaagca acacaggcaa tcgtatgttt aagcgttatg cagtcattac aacatctgca
     2401 aaaatattag gtcgtgtttt agctacagat attgatatcg ctaaaataag agactacttt
     2461 attgattatc atggtcatac aatctctgaa cgctcattag ctgataaagc tatcgatgtc
     2521 atcattcaat ttgtagcaca aaacagaggt aagttttcag atgaaggtgc tttgaaaaat
     2581 atgtttgaga actatggatt aatctcatta aaagatgacc atatcgaagt aaaaataatt
     2641 gcgaacgttt ttaaacagat gctaaacaat catcaatttc aagatgttaa taatgttgtc
     2701 aacgccttaa gagataaagg tttcatatta gctgaccgtg gacgccaaac aactaaaaga
     2761 agtgtcaaag ataatagcgg taaaaaacaa tcacttgtat tttaccatct aaaattagat
     2821 gtagagtttg catctatcct cggattaact aaagataagt cgttacttca aaattggaca
     2881 ccgtcaaatg ataacaaagc tgcgaaagaa ctttttaaat ccgctaatga agggataggc
     2941 ccttcaggag ttcacgaaga tttctaattg tctttatcat acaactgtga agcatcaaac
     3001 tgaataatcg acgtattgaa gatagaacaa ataacggagt gaaaaacatg gatgaactta
     3061 tcgagatatt agccgatttg gtaattgaag aaatcaatca aacaaatgac taatatggac
     3121 gcccaacatc tcattgatgt tgggcttata tatcaattca tccataaata tatattatca
     3181 ctgtgaaagg aggagccgat atgaaacaag tcataggcta tttacgtcaa agtacgatga
     3241 aacaacaatc tcttgcagca cagaaacaag ctatcgaagc aatagccgaa aaacatcata
     3301 ttcaacatat caacttttat agcgacaaac aatcaggtcg caaagataat cgtagtgggt
     3361 atcgacaaat aacacaatta attcaacaag gacagtgtga catattatgc tgttatcgtc
     3421 ttaataggtt gcatcgtaat ctgaaaaatg cattaaaact catcaaatta tgtcaaacgt
     3481 accatgttca tatcttaagc gtacatgatg gttactttga tatggatcaa gctttcgacc
     3541 gactcaagct taatatcttc atcagtttag ccgaacttga atcggataac attggagaac
     3601 aagtcagaaa tgggcttcaa gaaaaagcaa agcaaggtcg attgattaca acacatgcac
     3661 cttttggtta cgattatcac cacggaacat tcatcatcaa tcaaaatgag tcaccaacgg
     3721 taaaggctgt attcaattat tacattaaag gccatggtta taagaaaatt gcacagttat
     3781 tagaagaaga taacacgtat atcaatcgac aaccctatca agttcgtaac attatcatca
     3841 atcctaatta ttgtggtcgt gtcaacaatc aatatggcca attcgacaat atgtttcctt
     3901 ctattgtttc cacaagtata tatgagcaag cgcagagact tcgatcgcaa aaacaaacca
     3961 aacagacatc ttcggataat caactcaaac aaaaaatcaa atgcccatgt tgtaatgcaa
     4021 cacttacaaa tatgaccatt agaaaaaaga atcatacatt acgttactac gtctgtccta
     4081 aaaacatgaa tgcttcacgc tttgtctgtg attttaaagg catcaatgca caaacacttg
     4141 aagataaagt attagaagtg tgccgagact tttatcaaaa tcaacgcatc tacacaaaaa
     4201 ttaaaagtgc gattgacaaa cgcatcaaaa gacaaagaaa catagaaaaa catcacacat
     4261 tgactcaaga acaactgata gaaaagttgg cacaaggcat cattgatgca gaaacgttca
     4321 gagagcaaac acaatcatta cgtcaacaac cgcaacgcac tacatctatc aatgggcatc
     4381 aaatacaaca catcattcaa aatattattc aaaaacgttt cacgttaaac atattgtacc
     4441 cctatattga aaccattcac attacgaaag ataaaaatct tataggaatc tatttcaaaa
     4501 atgaaccact caatattgtc aatcaaacca tgcaatcatc gattgcataa atgaagaaag
     4561 gatgtaacat aatgcaacaa cttaaaacaa aacgtgtcgg tatctatgta cgtgtatcaa
     4621 cagaaatgca aagcacagaa ggttatagta tcgacggaca aatcaatcaa atcaaagaat
     4681 actgtgactt ccatcatttt gaagttaaag atatatacgc tgaccgtggt atttcaggta
     4741 aatctatgaa cagacctgag ctccaacgta tgttgaaaga tgcaaaagaa ggcaatatcg
     4801 actgtgttat ggtatacaaa acaaaccgat tagctcgtaa tacatctgat cttctcaaaa
     4861 ttgtcgaaga tttacacaaa caaaatgtcg aatttttcag tttgtcagag cgtatggaag
     4921 tcaatacttc ttctggtaaa ctcatgttac agatacttgc gagtttctca gaattcgaac
     4981 gtaataacat tgtcgagaac gtatttatgg gtcaaacgag acgtgcccaa gaaggctatt
     5041 atcaaggcaa tttaccacta ggttatgaca aaataccaga tagtaaacac gagctaatga
     5101 ttaaccaaca tgaagctaat attgtaaaat atatattcga gtgctatgcc aaaggacatg
     5161 gctatcgtaa aattgccaat gcattgaatc acaaaggata tgtcactaaa aaggggaaac
     5221 ctttcagtat tagttcaatc acatacatct tagctaaccc tttctatatc ggcaaaattc
     5281 aatttgcgaa atacaaagat tggagtgaaa aacgtcgtaa agggctgaat gataaaccag
     5341 tgatagctga aggtaagcat tcccccatta ttaatcaaga tttatgggat aaagtacaaa
     5401 tgcgtaagaa acaagtcagt caaaaacccc aagtccatgg caaaggaacg aatctgctta
     5461 caggcattat tcactgtccc caatgtggcg cacctatggc agcaagcaat accacgaata
     5521 ctcttaaaga cgggactaag aaacgtattc gttactattc atgtagtaat tttcggaaca
     5581 agggttccaa agtatgttcg gcaaacagtg taagagctga tgtgattgaa gattatgtga
     5641 tgaagcaaat acttgaaata gtcaaaagtg ataaagtcat tcaacgcgta gtaacacacg
     5701 tcaatcaaga aaatcaagtt gatggcgctg cacttcatca cgatattgct tataagcaac
     5761 aacaatatga tgaagtacaa atcaaaataa ataacttgat taaaaccatc gaggataatc
     5821 cggacttaac atcagtaatc agaccaagta ttcaaaaata tgaaaagcaa ctcaatgaca
     5881 ttacgaatca aatcaaccaa ctcaaaaatc aacaaaatga agataagact ttatttgatg
     5941 ccaaagaaat cagtaaacta ttacaacaca tctttcatga tattaaacac atagaaaaat
     6001 ctcgactcaa agcattgtat ctatcagtga ttgatcgcat tgatattaaa aaagatggta
     6061 atcataaaaa acaattctat gtcacactca aacttaataa cgaaatcatt aaacaacttt
     6121 tcaataataa acaactcgac gaagtgcatc tcagcacttc gtctttattt ttgccccaaa
     6181 cactatatct tactatttag ctaatagaat cattgttata acaataattt tcactatatt
     6241 ctttcgctta ttttatctaa ctattttcaa gaattgctct ttatcaattt caataacact
     6301 tatctaatga aacagttatt gtcgtaattt tttcataact atacaatgct tatattgaaa
     6361 ttgctaaaga acatcccaca atgatttttt atcgggaaat gattgggatt tgcagattcg
     6421 aagaaacaga aggattgtgc aagca
//
LOCUS       DAKPJH010000130         6364 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.130, whole genome shotgun sequence.
ACCESSION   DAKPJH010000130 DAKPJH010000000
VERSION     DAKPJH010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6364
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.130"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(57..854)
                     /locus_tag="OY092_002354"
     CDS             complement(57..854)
                     /locus_tag="OY092_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HCX1077275.1"
                     /translation="MTDKTLQQIDKLICSWLKQIDNVIPQLIMEMTTETKRHRFDLVT
                     NVDKQIQQQFQQFLATHFPEHQLLAEEKSNKMITNEINHLWIMDPIDGTANLVKQQEE
                     YCIILAYFYEGKPMLSYVYDYPHKKLYKALRGEGAFCNGIKMEEPPSLKLEDAIISFN
                     AQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAE
                     LLNLKMTTLDGKAIDHLKGAPFIISNQACHETVLKILNANGGYQKYR"
     gene            1239..1931
                     /locus_tag="OY092_002355"
     CDS             1239..1931
                     /locus_tag="OY092_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HCX1077276.1"
                     /translation="MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLE
                     NQGVKIYAHYGKNGGYQIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINA
                     IIKQCLSLPQTRLRKLLKRMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVD
                     DNIKAENVIFIGLLCKHGHWHAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISI
                     DNYHQFLNPIDS"
     gene            complement(1956..2693)
                     /gene="sdpB"
                     /locus_tag="OY092_002356"
     CDS             complement(1956..2693)
                     /gene="sdpB"
                     /locus_tag="OY092_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpB"
                     /protein_id="HCX1077277.1"
                     /translation="MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGY
                     YKIDSNLIFVATITQALAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYII
                     ALILIYTYEYMTQFLPKHLQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIV
                     FRHILIGELGKKFNFIAMSIVSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYIKSG
                     RNLGSTIALHIANNFVSFVISVISIYA"
     gene            2742..3071
                     /locus_tag="OY092_002357"
     CDS             2742..3071
                     /locus_tag="OY092_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077278.1"
                     /translation="MINETKYMRQQITNLIQIIDTIKYNTLMTNWNIQTHIYKFNQIV
                     TNELNKFKGFETSYIINEKQVFYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNAL
                     FAIKFAH"
     gene            3516..4388
                     /locus_tag="OY092_002358"
     CDS             3516..4388
                     /locus_tag="OY092_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCX1077279.1"
                     /translation="MSNVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASL
                     LDISTSSVIRFSKKITDGGFHDLKINISKYVPKASSIYNVELMNNESTESLRTKLHTR
                     TTRALNHANNELNDKTIDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQL
                     VQETHIFATLLATHNSNDSVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVA
                     QASNIVLTYGKTDENEMHMGATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMAL
                     DNYRKHLSNINFKH"
     gene            complement(4777..6156)
                     /locus_tag="OY092_002359"
     CDS             complement(4777..6156)
                     /locus_tag="OY092_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCX1077280.1"
                     /translation="MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVI
                     LAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWSNIFQWIVVG
                     MSEVIAVGEYMKFWFPELPTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
                     LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIG
                     ITAGETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKI
                     GITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTV
                     VAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHP
                     EEVEGHPFKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIR
                     YNKNNVKAK"
BASE COUNT         2323 a         1097 c          826 g         2118 t
ORIGIN      
        1 ctatacttct gtagacgtat aactattttt tatcattttt tatcactata gaatatctat
       61 ctgtattttt gataaccacc atttgcattt aaaattttaa gtaccgtttc atgacatgct
      121 tgattactta taataaaagg tgcacccttt aaatgatcaa ttgccttacc atctaaagtt
      181 gtcattttta gattcaatag ttctgcaaat aaaaactgcg cagcaatgtc ccaaggttta
      241 ggatttgtat taatatgtgc cccaaattga ccttttgcca ctcgcataga atctaatccg
      301 caagcaccaa ctaaacgata actaaatgag gcgtcaaata aatcttgcac cgtatccaga
      361 ttcatcactt gtgcattaaa cgatataata gcgtcttcca attttaacga tggtggttct
      421 tccatcttaa ttccattaca aaaagcacct tctcctcgta gtgctttata aagcttttta
      481 tgcggataat catatacata cgataacatt ggtttacctt cataaaaata cgccaatata
      541 atacaatact cttcttgctg ttttactaaa ttggcagttc catcaatggg atccataatc
      601 cataaatgat taatttcatt cgtaatcatt ttattacttt tttcttccgc taatagttgg
      661 tgttccggaa aatgcgttgc taaaaattgt tgaaattgtt gttgaatctg tttatctaca
      721 tttgtaacta aatcaaatcg atgacgcttg gtttctgtag tcatctccat aattaattgt
      781 ggaataacat tgtctatttg tttcaaccac gaacatatta acttatctat ttgctgtaat
      841 gttttatctg tcacttcgtc caccacttct catatcatta tcattttact attaccctat
      901 attaaaagaa tcaacaatac aactgaagac ttcttctttt tgtgcataaa aaaatcggct
      961 agtcacgtgc tagccgacaa atagaaagga aagtaagtaa taaatattga agatgttgtg
     1021 atgtaacttg aacgattaaa agctatctgt tatatagctc tacccctttg tttaatcgct
     1081 ccccctgtta caagtaatat catagcacaa tcttttttaa aatgtaagcg ttttctacaa
     1141 aatttttccg atttttttaa aaagatattg aaaatgtcct cattgtcact cttatgttat
     1201 actttgtgta atatatcatc ttttaggagg tggctgtcat gaataaagct gaaaggcaaa
     1261 atttaataat tactgcaatt caacaaaata aaaaaatgac cgctttagaa ttagctaaat
     1321 attgcaacgt atccaaacgc acaattttaa gagatattga tgatttagaa aatcaaggtg
     1381 ttaaaattta tgcgcattat gggaaaaatg gtggttacca aatacaacaa gcacaatcta
     1441 aaattgcatt aaacttatct gaaacacaat tatcggcctt atttttagtg cttaatgaaa
     1501 gtcagtcgta ctcgacatta ccatataaaa gcgaaatcaa cgcaattata aaacaatgtt
     1561 taagtcttcc acaaacacgc ttaagaaagt tgcttaagcg catggacttt tatattaaat
     1621 ttgatgacac acaacatatg acactcccaa tgttgttttc cgacatttta atttattgta
     1681 cagaacgaaa tgtgatgtta gtagatcata gggttgatga taatattaaa gccgaaaacg
     1741 ttatatttat tggccttttg tgtaaacatg gacattggca tgcagtcatt tatgatattg
     1801 ctcaagacaa aactgccgaa ctcgaaattg aaaatattat agatatttcg tattcattcg
     1861 gtaagacgat tcaaaccaga gacatatcca ttgataacta tcatcaattt ttaaacccca
     1921 tcgattccta aactatggag tcgatggggt tttatctacg cataaatact tattactgat
     1981 ataacgaaag aaacaaaatt atttgctata tgtaatgcaa ttgttgaacc taggtttctt
     2041 ccagatttta tataagtgaa aactaatatg atggatagta tgagatatgg accaaactca
     2101 aatggcgact ttgcatcagt cacatgaata aatgcaaata agaacaccga aacaatactc
     2161 atagctataa aattaaactt cttacctaat tctccaatta aaatatgtct aaatacgatt
     2221 tcttcaacta ttggacctac aatcacaatt aataagaatg ctacaggtaa aaatgcaggc
     2281 acttcaaaca ttttatttag ctcaagttca ttggctgttt cactatattg caaatgttta
     2341 ggtagaaact gtgtcatata ttcatatgta taaattaaga tgagagcaat aatatacgtt
     2401 attgacaatc taagccaata ttttttgata tacgcaaaac cagctcgaag ccttgatggc
     2461 atcactttta aatgaaataa ataaaatgcg ccaatcccaa tcgtatatgc taaagcttgt
     2521 gtgatagtcg ctacaaatat cagattacta tcgattttat aataaccaaa caaaattggt
     2581 cctatgtaag ctgcaattgt gagtgcataa aatataacac ctataattgg aattataagc
     2641 aaatctctcc atgctatatc tttaaacgtg tatttctttt tttcattttc cactgttata
     2701 tcctttcctg tttaataatt gatttttgga ggtacttcta catgataaac gaaactaagt
     2761 atatgagaca acaaattact aatttgattc aaatcattga tacgattaaa tataatactt
     2821 taatgacaaa ttggaacatt caaacgcata tttataaatt taaccaaata gttactaatg
     2881 aattgaataa gttcaaaggc tttgaaacat catatataat aaacgaaaag caagttttct
     2941 attatgaaat tataacacta cttaataaac gtcccctccg acaagtcgac tatggtaaca
     3001 aaattcaata tcttaatttt tatcatacag aactatctaa cgcattattt gcaattaaat
     3061 ttgctcatta acctattttt cataaaatgt catttaaaca agttatttat taaaattcac
     3121 tttattacat aaattataca attaaaaagt ttcttcaaat tgtaaagatg cattaatcga
     3181 gttataatca taatgattaa gatggtagat ttagtcttat ataactacat ttactaagat
     3241 ttaaatagat gagtacataa tgtataaatt gggaatatac agtatgactt acggtaatat
     3301 atcaatatat tgatatatta tttgcacatg ggagtatgct attttttatc tatacatctt
     3361 aaaaaaattt acagttttat aattcaatat cattaaacaa acaacatatt cagcttattt
     3421 ttcattctct aacgttacaa gttgtaaata ccatcgcgtt aaacaacaat agccaacgct
     3481 aataaaatat attgcgttaa agtggagtga ttaatatgtc aaacgtacta acagaaatag
     3541 atagtcaata tccatatatg actaaaaatg aaaaaaagat agctaaattt atactaaatt
     3601 cacctcaaaa ggtgattaaa atgaggtctc aagacttagc aagcttatta gatattagta
     3661 catcatcagt cattcgattt agcaagaaaa ttactgatgg cggttttcac gacttgaaaa
     3721 taaatatatc taaatatgtt cctaaagcat catcaattta caatgttgaa ttaatgaata
     3781 acgaaagcac agaatcttta agaactaaac tccatacacg tactacacgc gcacttaatc
     3841 atgcaaataa cgaattaaat gataaaacta ttgatcaaat atgtcattgt ttaaaacgtt
     3901 ctgagacgat ttttatatat ggttttggcg catcttttgt agttgctacc gacttatacc
     3961 aaaagttatc aagaataggt cttaatattc aacttgttca agaaacacat atttttgcaa
     4021 cattattagc aactcacaat tcgaatgaca gtgttattct tattactaac aatggtacgc
     4081 aaagtgaaat gcaatcaatg gttaaagtta ttgatgacta ccatatacct ataattacaa
     4141 ttactagtac aagggataat cccgtagcac aggcatcaaa tattgtttta acttatggga
     4201 aaactgatga aaatgagatg catatgggag caacaacttc attatttgct caaatgttca
     4261 ctattgatat tttatattat cgttatgttg cattaaatta tcacgcatca ttagatttca
     4321 taacacaatc taaaatggct ttagataact atcgtaaaca tttatcaaat attaacttta
     4381 aacattaaca gtcttatata aattctttaa tcatgtcata taataattta tgcatcattt
     4441 tcaaagctta catgtctttt atcttgtata acatacgcat atgaccaatg atttgataag
     4501 gccattcaat ttcttatatt aaaaacaaac gcagttgatt aacggattca ttccatatat
     4561 caattgcgtt tgttatttta ataaagctat tttttatttt aaagcctaca gtaaaaacta
     4621 acgatagtat tgccacttat aagtaaattc atactacatc tttgatttaa gctatattta
     4681 taaaaaaatg cgcctactca taacatttct ttggctattt aactttaata agctagggcc
     4741 aagtttgtca taaaataagc gcacattata atcatactat tttgctttta cattattttt
     4801 attatatcta ataaaataat aaatcgttac aatcgttaag aagataacac caataagcac
     4861 tgatattcta gtttcaacat taaataccat accaaccaat actaatatta aaaataagat
     4921 tgttaaatag ttagttactg cgccaccagg cattttgaat gggtgacctt ccacttcttc
     4981 agggtgtaat tttctaaaac gtaagtgact gaataaaatc ataaaccaag gaatcatacc
     5041 tggtaaaata gacgcactat aaacgtatac gaaaatactc ttcgctccat cgatatataa
     5101 aggtaaaatt acgtttaata aagcaccaat taaaatacca agagatactg caacaacagt
     5161 gtacaatggc acaccatttc tcatgatttt agtaaatatt ttcggcattt cacctttatg
     5221 agcaagtgta taaatcatac gactcgcact gaaaatacct gagttacatc ctgacattgc
     5281 tgcagttaat acaacaaagt taattaatcc agctgcaaat gtaataccga tttttgcaaa
     5341 tgttgcaaca aacggacttc caatgtctcc taattgattc caaggataca ctgaaacaat
     5401 aacaaaaata gcacctaaat agaaaattaa aattctccag ataacaccat tcactgcttt
     5461 aacgatattt ttctgaggat ctttagtttc acctgcagta atacctatca gttccacacc
     5521 ttggtatgaa ccaattacaa ttgataatgc aaagaagaaa ccaacaatac catttggcat
     5581 aaatccgcca tttgtccata gattagaaat acctaccgca tggccaccat ttccaaaacc
     5641 aaagaaaata agaccaaaac cagcaataat cattaaaata attgttacaa ctttaattaa
     5701 agcaaaccaa aattcgaatt ctccaaacgc ttttaccgag aataaattcg ctgccatcaa
     5761 taataaaata gcaataatac caggaatcca ggttggcaat tccgggaacc aaaacttcat
     5821 atattctcct actgcgatga cctcactcat accaacaaca atccattgga atatattact
     5881 ccatgctgtc atataacctg ctgcaggatg tatataatca cttgcaaatg ttgcaaatga
     5941 tcctgttgta gggtttaaat aaatcatttc ccccattgct ctcatgatta aaaataaaaa
     6001 gatacccgca attaaatatg caaggataac tgatgggcct gtccatttaa ttgtacttgt
     6061 agcacccatg aaaagcccca cgccaatcgt accaccaagt gcaatcattt gaatttgacg
     6121 ggcactcaat cccctttgta gttcattgtt ctccataact tcttacccca tctctgattg
     6181 atactaaata aatccataaa aaaacttatt gccgtaatta tactataaat taccgatttt
     6241 ggtacattaa tatttgcata ccatgcaatc gtttacagaa ctactatagc aggcttttgc
     6301 aactttgcaa acaattattt tgtgattttt ctaaaaaaat aaaaaagttg ttcgaaaact
     6361 atta
//
LOCUS       DAKPJH010000131         6359 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.131, whole genome shotgun sequence.
ACCESSION   DAKPJH010000131 DAKPJH010000000
VERSION     DAKPJH010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6359
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.131"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(150..776)
                     /locus_tag="OY092_002360"
     CDS             complement(150..776)
                     /locus_tag="OY092_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000593102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1077281.1"
                     /translation="MIKLENVFVKKGNKNILDGCNFNFEKGKSYALVGESGAGKSTLL
                     NIIAGFEDVSQGSIYIEDKLLKKKVDFYRYTLGYLFQNFALLENQTISQNLGLALKFK
                     KNKKDNMNLKKEVLKKVGLDLDIKRIVSSLSGGEQQRVALARLILKDPKIILADEPTG
                     SLDTKNGKIVIDLLLKLLDENKTMIVVTHDLELAKRFDVIVNISELRS"
     gene            complement(788..1099)
                     /locus_tag="OY092_002361"
     CDS             complement(788..1099)
                     /locus_tag="OY092_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HCX1077282.1"
                     /translation="MKRTLIIVTIVLLIIILSLLLVRNEHLDRFNPLLKEKVSYAKVP
                     KDTQDYRNITVYSKNGEKKSYKLDFLGYDPTKEYVKVNHKGKYVRSIEYITKDIPSFL
                     K"
     gene            complement(1103..3037)
                     /locus_tag="OY092_002362"
     CDS             complement(1103..3037)
                     /locus_tag="OY092_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="HCX1077283.1"
                     /translation="MKKFKLFLDFSTLLLISGLLFLFFFKENEEIIPESSNILTISNW
                     DKSNSKSKVLDVIESGAKNQNIQIIKSVKDFDNKKEFFVFNSKRNNSDFIRNKTSLLT
                     PSDLLNREIKGKYYIIGEHFNVEELTSELKKAGLTSEVEYINRNILFFELVIDNDLLV
                     PFIFLGVLYLLYFLYDRGYNLKFYAIQKLHGFSTTRIIFHNIHIKIIYWLVLTTIFFI
                     ANILIIHIANLELDFLMFIRRFIVLLFVFACITTLLWLISYSLLLKLSIPLTLKGKKG
                     YKFSIFMGTFTKCIMVLILSFLLAQNLNAYTKLKNIYDSEKIWQKLDNYYTLEISPNI
                     RNSEEKQILETNIYNLIKKSEQLGGLLLKNNNIANPDKNNYIPENGNVFFINNNFLNF
                     YKNINHDFKMIVNHSDKINVFIPPRLQYQKSEIQKNHQGWIDFQKQQNKKVDVQVLSK
                     NVSVFSFDRTTNLKFGYLDSPIVMLLTPDDLTGDFYLAAVSQGGYLFKDLDTLKQLLK
                     DNHLEEEISGITNYKDSVLNELNETKTKMIITIVTIIINVFILLIATVFETIQYFSWN
                     KKQLLLRKIHGYSLFSSNVRYLTISILLSIMLAYATHILFGSKILLFIIMSIAIIQHL
                     LQIAYIKYLEKYFKDLMREI"
     gene            complement(3112..3405)
                     /locus_tag="OY092_002363"
     CDS             complement(3112..3405)
                     /locus_tag="OY092_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000726503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HCX1077284.1"
                     /translation="MKKKFVSSCIASTILFGTLLGVTYKAEAATVHVAGGVWSHGIGK
                     HYVWSYYSHNKRNHGSTAVGKYSSFSGVARPGVQSKASAPKAWGGNKTFYSLH"
     gene            complement(3784..4179)
                     /locus_tag="OY092_002364"
     CDS             complement(3784..4179)
                     /locus_tag="OY092_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent arsenate reductase"
                     /protein_id="HCX1077285.1"
                     /translation="MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGV
                     NPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWG
                     FDDPAGKEWSEFQRVRDEIKLAIEKFKLR"
     gene            complement(4197..5489)
                     /gene="arsB"
                     /locus_tag="OY092_002365"
     CDS             complement(4197..5489)
                     /gene="arsB"
                     /locus_tag="OY092_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter membrane subunit
                     ArsB"
                     /protein_id="HCX1077286.1"
                     /translation="MMTILAIVIFLLTLTFVIWQPKGLDIGITALIGAVVAIITGVVS
                     LSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEWSAIHMVKASNGNGLKMFVFIML
                     LGAIVAAFFANDGAALILTPIVLAMVRNLGFNQKVIFPFIIASGFIADTTSLPLIVSN
                     LVNIVSADYFDIGFIEYFSRMIIPNIFSLIASILVLWLYFRKSIPKTFDTENLSDPKS
                     AIKDSKLFKLSWIVLAVLLVGYLVSEFIQIPVSIIAGIIAFIFVILARKSKAVHTKQV
                     IKGAPWNIVVFSIGMYLVVFGLKNVGITTVLGDVLTNISNYGLFSSIMGIGFIAAFLS
                     SIMNNMPTVLIDAIAIGQSSATGILKEGMVYANVIGSDLGPKITPIGSLATLLWLHVL
                     TQKGVKISWGTYFKTGIIITIPVLFVTLLGLYLTLIIF"
     gene            complement(5486..5800)
                     /gene="arsR"
                     /locus_tag="OY092_002366"
     CDS             complement(5486..5800)
                     /gene="arsR"
                     /locus_tag="OY092_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000120606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HCX1077287.1"
                     /translation="MSYKELSTILKILSDSSRLEILDLLSCGELCACDLLEHFQFSQP
                     TLSHHMKSLVDNELVTTRKDGNKHWYQLNHAILDDIIQNLNIINTSNQRCVCKNVESG
                     DC"
     gene            complement(5861..6196)
                     /locus_tag="OY092_002367"
     CDS             complement(5861..6196)
                     /locus_tag="OY092_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCX1077288.1"
                     /translation="MITSLPMMNEVIGNPLLDKFMKDLIIQILAMISEQERNESKRRQ
                     AQGIQVAKEKGIYKGRPILYSPNAKDPQKRLVYYRVVELLEQGKSISTIAKEVGITRQ
                     TIYRIKNSK"
BASE COUNT         2223 a         1026 c          818 g         2292 t
ORIGIN      
        1 ttaaaaacgt gtgctctgcg aggcttgttt tttgtcatca caaaaaagga ctggaaaatc
       61 cagtccttaa attaaaaaac tcaaaagtaa tgactaatca tatttcatat tgttttttct
      121 ctatgtatgg ctatacctat caatatttct taacttctaa gctcagaaat attgactatg
      181 acatcaaatc gtttcgcaag ctctaaatca tgcgttacga caatcatagt tttattttca
      241 tcaagtagct tcaataataa atcaataact atttttccat ttttcgtatc tagtgatcca
      301 gtaggttcat cagctaaaat gattttcgga tcttttaata ttaatcttgc caatgctact
      361 ctttgttgtt caccaccgct tagagaacta acaattctct tgatatctaa atctaggccg
      421 acctttttta atacttcttt ctttaagttc atattatctt ttttattctt tttgaacttt
      481 agggctaaac ctaaattttg actgattgtt tgattttcaa gtaaagcaaa attttgaaac
      541 aaatacccta acgtatatct ataaaaatcg actttctttt ttagtaactt atcttcaata
      601 tatatgcttc cttgtgatac atcttcgaac ccggcgatta tgttaagtaa agtagatttt
      661 ccagcgccac tttctccaac taaagcatat gattttcctt tttcaaaatt aaagttacat
      721 ccgtctaaaa tgtttttatt accttttttt acaaaaacat tttcaagttt tatcactatc
      781 ggtcacctca ttttaaaaag ctaggaatat cttttgtaat gtattctatc gaacgcacat
      841 atttcccttt atgatttact ttcacatatt cttttgtagg atcataacct aaaaaatcca
      901 atttataact ctttttttct ccatttttag agtatacagt tatatttcta tagtcctggg
      961 tatcttttgg aactttggca taagatactt tttcttttaa cagtgggtta aaacgatcta
     1021 aatgctcatt tctaaccaat aacagactaa gtatgatgat taatagtaca attgttacaa
     1081 taattaaagt tcttttcatt gtttaaatct ccctcattaa atctttaaag tatttttcaa
     1141 gatatttaat ataagcaatt tgaagtaaat gttgaataat agcaatagac attattatga
     1201 atagtaatat ctttgaacca aataaaatat gcgtagcgta agctaacata atagaaagta
     1261 aaatagaaat tgttaaataa cgtacattac tgctgaataa tgaataacca tgaatttttc
     1321 ttaataatag ttgcttttta ttccagctaa aatattgaat tgtttcaaat acagtagcta
     1381 tcaaaagaat gaaaacgtta ataataatag taactattgt tattatcatt tttgttttcg
     1441 tttcatttaa ttcatttaac acagaatcct tgtaattagt tataccgcta atttcttctt
     1501 ctaggtgatt atctttaagc aactgtttaa gtgtatctaa atctttaaat agatatccac
     1561 cttgagaaac agcagctaaa taaaaatctc ctgttaaatc gtcaggtgtc aacaacatta
     1621 ctattggaga atctagatat ccaaatttca aattagttgt gcgatcaaaa gaaaaaacag
     1681 atacgttttt tgacagtact tgcacatcta cttttttgtt ttgttgcttt tgaaagtcaa
     1741 tccatccttg gtgatttttt tgaatttcag atttttgata ttgtaacctt ggaggaataa
     1801 acacgtttat tttatccgaa tgattgacaa tcattttaaa atcatgattt atatttttat
     1861 agaaattcag aaaattgtta ttgataaaaa agacattgcc attttcagga atgtaattgt
     1921 ttttatcggg attggctata ttattattct ttaaaagcaa tccaccaagt tgttcgcttt
     1981 tcttaattaa attgtatata ttagtttcta aaatttgttt ttcttctgaa tttctaatat
     2041 taggagaaat ctctaatgta tagtaattat ctaacttttg ccagattttt tcagagtcat
     2101 atatattctt taacttcgta taagcattta aattttgtgc cagtaaaaaa gatagtatta
     2161 gcaccatgat acatttggtg aaggtaccca taaatattga aaacttatat ccttttttcc
     2221 cttttaaggt taatggaata cttaacttca aaagaagact atacgaaatc agccacaaca
     2281 atgtagtaat acaagcaaaa acaaaaagca acacgataaa tctacgaata aacattaaga
     2341 aatccaattc taaattggct atatgaatga ttaatatatt agcaataaag aaaatagtgg
     2401 taagtactag ccaataaatg atttttatat gaatattatg aaaaataatg cgtgtagttg
     2461 aaaagccatg tagcttttga atagcataaa atttcaaatt atatcctctg tcatataaga
     2521 agtacaaaag atataatacg cctaagaata tgaaaggcac taataaatca ttatctatga
     2581 ctaattcaaa aaataatatg tttctattta tgtattcaac ttcagatgtt aaaccagctt
     2641 tttttaattc actcgtaagc tcttctacat tgaaatgttc accaataata taatactttc
     2701 cttttatctc tctgtttaat aaatctgatg gagttaaaag tgatgtttta ttacgtataa
     2761 agtcagaatt atttcgtttt gagttgaaaa caaaaaattc ttttttatta tcaaaatctt
     2821 taacggattt aattatttgt atattttgat ttttggcgcc tgattcaatg acatctaaca
     2881 cttttgattt actgttagat ttatcccaat tagagattgt taaaatattg gaactttcag
     2941 gtataatttc ttcattttct ttgaagaaaa ataaaaataa tagccctgaa attaataata
     3001 aagtactaaa atctaaaaat aatttgaatt ttttcatatt gcctctttca agagaataga
     3061 cagaattaag tttacttaat tctgtctatt ctccttaatt aatatatgta attagtgaag
     3121 actataaaat gttttgtttc caccccaagc ctttggagca gatgccttag attgaacacc
     3181 aggtcgagca acaccactaa aagatgaata tttccctact gctgttgaac catgatttct
     3241 tttattgtga ctataataag accatacgta atgttttcca ataccatggc tccaaacacc
     3301 accagctaca tgtactgttg cagcttcagc tttataagtt acacctaata aagtgccgaa
     3361 taagattgta ctagcaatac aactagaaac aaatttcttt ttcataaaaa cacctccatt
     3421 taatattctt tatttattat agcaaaaata aataaaatag agaatgagta aaaataatct
     3481 aaaagtgttt tttgctctgt tgcttgtttt gttcatctat atataatatt aattctatta
     3541 tccttaaatt aactatcatt aaacaacgat atgacaatgt ataataaata caatttcact
     3601 acctataatt caacattatg taaactaaag tatttcaaat aattaactgt attaatactc
     3661 tcatcatgat tgcgttataa acgttcgcta atgagaaaaa gagagggcat attgtatatg
     3721 gcacaaattt tgttctttaa atggcaaaac acctcttatt aactaaataa gaggtgttta
     3781 tgattatctc aatttaaact tttctatagc taatttaatc tcgtctctaa cacgttggaa
     3841 ttctgaccat tctttacctg ctggatcatc aaaaccccaa tgctcttttt taacgtttgg
     3901 tggtaaaata ggacaattat tgtctgcatc actacataac gttacgacca aatctgattg
     3961 ttttaaaata tcattatcaa tcaagtctga cgtatggttt gatatatcaa tatctacttc
     4021 tttcatagct tctattgctt taggattaac accatgtgtt tcaataccag cagaatagac
     4081 attccaacct tcacccaata tttcctttcc ccaaccttca gccatttggc tacgacaaga
     4141 gtttcctgta catataaaat aaattgtttt cttatccata attaaagccc cttttcttaa
     4201 aatatgatta gtgtaaggta taaacctaag agtgttacaa ataggactgg aatagtgatg
     4261 ataattccag ttttaaagta tgttccccac gaaatcttca cacctttttg tgttaagaca
     4321 tgtagccaca ataatgttgc taaagaacca attggcgtaa ttttaggtcc taaatcagaa
     4381 cctatgacat tcgcataaac catgccttct tttaatattc ctgtagcact ggattggcca
     4441 atcgctattg catctattaa aacagttggc atgttgttca taatcgaaga taagaaagca
     4501 gctataaagc cgatacccat gatgctgcta aataacccat aatttgaaat gtttgttaaa
     4561 acatccccaa ggaccgttgt aatacctaca ttttttagtc caaacacaac aagatacata
     4621 ccaatagaga atacaacgat attccatggt gcacctttaa tcacttgttt tgtatgaact
     4681 gctttagatt tacgagctaa tattacaaag ataaaagcaa taataccagc aataattgat
     4741 acaggaattt ggataaactc gctaacaaga tatccaacga gtagtactgc taatactatc
     4801 catgaaagct taaataactt agaatcttta attgcacttt taggatctga tagattttct
     4861 gtatcgaacg ttttaggtat ggattttctg aaatataacc ataaaacgag aatactagca
     4921 atcagagaga atatattagg aatgatcatt cggctaaaat attcaataaa tccaatatcg
     4981 aagtaatctg cagaaacgat attaactaag ttacttacaa ttaagggaag tgatgtagta
     5041 tcagcaataa aaccactggc aataataaag gggaaaatca ctttttgatt aaatcctaga
     5101 ttccttacca tcgctaatac aataggcgtt aagattaaag ctgcaccatc atttgcgaaa
     5161 aatgctgcta caattgctcc aagtaacata ataaaaacaa acatttttaa gccattaccg
     5221 tttgaagcct tgaccatatg tatcgcagac cattcaaaaa aaccaatttc atctaatatt
     5281 aatgaaataa gaataacagc cacaaaagtt aaagttgcat tccaaacaat acctgttact
     5341 tctaatacat cagaaagact tacgactcct gtaatgatag caacaacagc tccaattaaa
     5401 gctgtaatac caatatctaa accttttggt tgccaaatca caaaggttaa agttaaaaga
     5461 aaaattacaa ttgctaaaat agtcatcaac agtcacctga ttccacattt ttacatacac
     5521 atctttgatt agatgtatta atgatgttca agttttggat aatatcatct aaaatagcat
     5581 gattaagttg ataccaatgt ttattgccgt cttttcgtgt tgtaactaat tcattatcta
     5641 ctaatgactt catatgatga cttagtgtag gttgtgagaa ttgaaagtgt tctaataagt
     5701 cacaagcgca tagctcacca caagaaagta aatctaatat ttctaaccta cttgaatctg
     5761 ataaaatttt taatattgtt gatagttctt tataagacat gaataaacct cctagacatt
     5821 aaatagatta acatctatat agattattgt ctatgttatt ttatttacta ttttttattc
     5881 tatatatagt ttgacgtgta ataccaactt ctttagctat agtacttata gatttaccct
     5941 gttcaagtaa ttcaacaact cggtaataaa ctaaacgctt ttgtgggtct ttagcattgg
     6001 gagaatacag aataggtctc cctttatata tacctttttc tttggcgact tgaatccctt
     6061 gagcttgtcg acgtttactt tcatttcttt cttgttctga aatcattgct aaaatttgaa
     6121 taattaaatc tttcataaat ttatctagta gtggatttcc aatgacttca ttcatcatag
     6181 gtaaactcgt tatcatgagc tgaacttctt ttcgaagatt tttcgtagat ataatttgct
     6241 aataaacttc ctaaaactga ataaagaaaa atagttaaac tcatgtaatc actccataat
     6301 tctgaagtgt ctccatgtct acgcatagac acgcatttat gccgagaaaa tttattgtg
//
LOCUS       DAKPJH010000132         6301 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.132, whole genome shotgun sequence.
ACCESSION   DAKPJH010000132 DAKPJH010000000
VERSION     DAKPJH010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6301
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.132"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            88..465
                     /locus_tag="OY092_002368"
     CDS             88..465
                     /locus_tag="OY092_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001643491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HCX1077289.1"
                     /translation="MSYSIIRVVKVKSKTNTRGIQRENKNYENIDIDLSKSYLNYDLV
                     NDTKFDFNKKIDEKIEKNYKGKRKIRTDAIKHIDGLITSDNVFLINYLKKRQNSFLSM
                     LKRSWKKNTVKKIFYMRQYIWMR"
     gene            405..731
                     /locus_tag="OY092_002369"
     CDS             405..731
                     /locus_tag="OY092_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001582045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HCX1077290.1"
                     /translation="MEEEYGKENLLYATVHMDEITPHMHYGVIPITKDGRLSAKEVVG
                     NKKALTEFQDRFNTYINKQGYDLKRGISRQLTKEKHDQVSGYKQKTEYHKQMYMREKQ
                     IEDHLK"
     gene            798..1298
                     /locus_tag="OY092_002370"
     CDS             798..1298
                     /locus_tag="OY092_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000273007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HCX1077291.1"
                     /translation="MYEIKTKNVGGWFHKEKQETGNIVITKTYFEKYTKQIKVAQMIL
                     DDYEWIKSGKSLKKSEKQNESLVNELTSVHMENEKLVEEFNDLAQRYNYLLSENEKKD
                     KELNYTLKLFNQVFKIIKSMMKEERYHTLINHIDNHLDNSKIREVMTIDNNDEQFFKK
                     KYQAQE"
     gene            1663..2523
                     /locus_tag="OY092_002371"
     CDS             1663..2523
                     /locus_tag="OY092_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000145511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HCX1077292.1"
                     /translation="MTGETVVYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLR
                     LSFDELKKLSNYSPETRNINRFANDLDNVYKKMLNLTIRYEDDDVIERFVLFNHYRIH
                     KREQYLEISTSSNLKHILNSITNNFTKFELKEMTRLKSTYSKNMFRLLKQYKHTGYLK
                     IHIDDFKNRLDIPKSYRMTDINKNVFKPIIIELGSIFNNLTINKIKAKKGRKIEWIEF
                     TFDAEKRIHNKRQPQMSKIDKSRQYVRREKTPKWLEERSYEKQPQKDYDPQLEKERED
                     FLKQLELNWE"
     gene            2610..2951
                     /locus_tag="OY092_002372"
     CDS             2610..2951
                     /locus_tag="OY092_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000761340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077293.1"
                     /translation="MKLAEAIKEQRELKRWSQEELANILKVSRQSVSKWESAKNYPSL
                     DILIAMSDLFGISLEHLIKGDARFKKVILEGNYRESNRAPSIVDFLYDFWWLFFPVAG
                     FLVWAIHSFMG"
     gene            complement(3166..3261)
                     /locus_tag="OY092_002373"
     CDS             complement(3166..3261)
                     /locus_tag="OY092_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002495983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HCX1077294.1"
                     /translation="MNEILVHIMTTAISGCLVTLFGYWLHKRDKK"
     gene            complement(3811..4581)
                     /locus_tag="OY092_002374"
     CDS             complement(3811..4581)
                     /locus_tag="OY092_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF536 domain-containing protein"
                     /protein_id="HCX1077295.1"
                     /translation="MKTIKMVADELNVTKQTIVNNAKNLNISFKKENGINYINDNDCL
                     KIIEKITKKERTMQNKESIKKERFNENTAEFEKHIYNNSNSFESLKTKVNELEKQIEI
                     FETRAKNDEKYIENLTKQLDQQNSNVNTLNKLLENQQILALESNKKIQKLENQLEEER
                     QLNYSFDTATNDRQSINPQEATFTEEYKNSNQQQKKIQPIEAELNHKGITKAKKDDSE
                     NEDVLKRDDKLSEEIESGPEDREVETPKKGFWSRLFGS"
     gene            5025..5969
                     /locus_tag="OY092_002375"
     CDS             5025..5969
                     /locus_tag="OY092_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001132443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HCX1077296.1"
                     /translation="MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALL
                     KDRFELSIQNEWVDRNNNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVG
                     LNKPNRLYLLKPKYDIEASLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELN
                     NTNYIENEDNDTYDMNDIISNTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQ
                     NYLSKFEIREIRIIKSVLLKGKKSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNE
                     TVEAMQGYLMQSIKAELEETHALYMRRKNMKQYNIFNQ"
     gene            5962..6278
                     /locus_tag="OY092_002376"
                     /pseudo
     CDS             5962..6278
                     /locus_tag="OY092_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
BASE COUNT         2393 a          801 c          973 g         2134 t
ORIGIN      
        1 gacttatttg gtttttaata agtctagtat gttaaaactt ttctgtgttt aggtgttata
       61 atcatatgca gtggaagttg atttattatg tcttattcaa ttattcgagt tgttaaagtg
      121 aaatcaaaaa caaatacaag aggtattcaa agagaaaata aaaattatga aaatatagat
      181 attgatttaa gtaagtcata tttaaactat gatttagtca atgatactaa gtttgatttt
      241 aataaaaaaa ttgatgagaa aatcgaaaaa aattataaag ggaaacgcaa aattagaaca
      301 gatgccatta aacatattga tggattaatt acatcagata atgtgttttt aatcaattat
      361 ctgaagaaga gacaaaatag ttttttaagc atgctaaagc gttcttggaa gaagaatacg
      421 gtaaagaaaa tcttttatat gcgacagtac atatggatga gataacacca catatgcatt
      481 atggcgtaat tcctattact aaagatggac gtttaagtgc gaaagaagtt gtaggtaata
      541 aaaaagcatt aaccgaattc caagatagat tcaatacgta tattaataag caaggctatg
      601 atttaaaacg aggaatttct agacaactta caaaagaaaa acatgatcaa gttagcggct
      661 ataaacaaaa aacagaatat cataaacaaa tgtatatgcg cgagaagcaa atagaggatc
      721 atttaaagtg agaaaatgat aaattgatat aaaactacca aaaatcatta gatacgctta
      781 aaaagcttct gagtgtcatg tatgaaatta aaactaaaaa tgtaggtgga tggtttcata
      841 aagagaagca agaaacaggc aatattgtaa ttactaaaac ttattttgaa aaatacacta
      901 aacaaattaa agtagcacag atgatattag atgattatga atggattaaa agtgggaagt
      961 cattaaaaaa atcagagaaa caaaatgaaa gtttagttaa tgaattgact agtgtccata
     1021 tggaaaatga aaagctggtt gaagaattta atgatttagc acaacgttat aattatttgt
     1081 tgtcagagaa tgaaaagaaa gataaagaac taaattatac gcttaagtta ttcaatcaag
     1141 tttttaaaat cattaaaagt atgatgaaag aagagcgtta tcatacgcta ataaatcata
     1201 ttgataatca tttagacaat tctaaaatac gtgaagtaat gacgatagat aacaatgatg
     1261 aacagttctt taagaagaaa tatcaagcac aagaatgaga aatcattttt aaagaagata
     1321 gagaagatgg ttatacatta taaaaataga tatttaaatg catttgtttg aggttaatta
     1381 ttttttagga tgaaaaatag gtagcccccc tctaactttt taatatattt ttataaatct
     1441 ttttaaaaac cttttcaggg gcttgttcag acctagagca acaagggatt tcaataccta
     1501 aaggagtgtt tttgccacat aaaaggagtg ttttaaaaag ttgtactcct tttatggttt
     1561 gacattgata ataaagtagt ttattgtgaa taaaagtttt caaatgggag tgtatattca
     1621 aacgatactc ctttaggttc gtaataaagg gggggctgta tcatgacagg agagacagtt
     1681 gtatataaaa atgaaatgaa tttagttcca ttaaggcgat ttacagctac tgaaattaat
     1741 ttattttttg cgatgtgtaa taaattaaaa gagcaagata ctaatacatt acgtttgtct
     1801 tttgatgaat taaaaaaatt aagtaattat agtccagaaa cacgtaatat taatagattt
     1861 gctaatgatt tagataatgt gtataaaaag atgttgaatt taaccattag atatgaagat
     1921 gatgatgtaa tagaaagatt cgttttattc aatcattata gaatccataa gcgagaacaa
     1981 tatctagaaa tatcaacttc ttcaaattta aaacacatat tgaattcaat tactaataat
     2041 tttacaaaat ttgaattaaa agaaatgact aggcttaaat ctacatattc taaaaatatg
     2101 tttagattac ttaaacaata caaacataca ggctatttaa aaattcacat cgatgatttt
     2161 aaaaatcgtt tagatatacc taaatcttat cgtatgactg atattaacaa aaatgttttt
     2221 aaacctatta ttattgaatt aggttctata tttaataatc ttactatcaa taaaatcaaa
     2281 gcgaaaaaag ggcgtaaaat tgaatggata gagttcacat ttgacgctga gaaacgcatt
     2341 cataacaaac gacaacctca aatgtccaag atagataaat caagacaata tgtgaggcgt
     2401 gaaaagacgc ctaaatggtt agaagaacgg tcatatgaaa agcaacctca aaaagattac
     2461 gacccacaat tagagaaaga acgagaggat tttttaaaac aacttgaact gaattgggaa
     2521 taacgcaact tttcgttgcg agttggttaa ctaaaagtat cgtgactttt caattatttt
     2581 aattatagtt tgagttaagg agtgatttta tgaaattagc tgaagctata aaagaacaga
     2641 gagaattaaa aagatggtct caagaggaat tagccaatat attaaaggtt tccagacaaa
     2701 gtgtttctaa atgggaaagt gccaaaaact atccttcctt agatattttg attgctatga
     2761 gcgatttatt tggaatctct ttagagcatt taattaaagg agatgcacgt tttaaaaaag
     2821 ttattttaga gggaaattat agagagagta acagggcacc ttccatagtt gattttcttt
     2881 atgatttttg gtggcttttc tttcctgttg ccggattttt agtttgggcc attcattcgt
     2941 tcatgggttg attttaaaat caaaatttaa tgcacatcag gcaatatgaa aaaggaaagt
     3001 atttttacga caccttgaaa tgtattgata agaatagaag agtttacaaa aggcaatatg
     3061 aaatatatac taaaagtaac aagaatttcg tttgtaaacg caccaaaccc cgaactattc
     3121 gccgtagttc ggggtttttt ggtgaattgg ctttaatcgt ctatattatt ttttatcacg
     3181 tttatggagc caataaccaa ataacgtaac gagacaacca ctgattgccg ttgtcatgat
     3241 gtgaacaaga atttcattca taaatcgcac ctcctctcta cgccgaattg acgtctgaga
     3301 gatagacgac cttcacatta taacaaatct cttcttccat gaaataacat gaatattaat
     3361 aaatgttgtt atatattaaa gataaataaa tataagggtg ggattgataa tgtttggcga
     3421 tcaaagataa gaagctacaa aatatgtcat taaagaaggt tatcaagata tttatttcct
     3481 caacaaaaac ggggaatggt attatttcga agtaagaagt gcctggcgtg gcaaacatat
     3541 tattagagtt aaagatggtt tgttaggttg gagaaaagaa atagtaactg aataaagata
     3601 caaaatactt gccaatgcaa aagaatgaaa acgcgtcaaa tcaacgatgt ataaaagatg
     3661 cataaaagat aatgaaagta aaaagccata aatgcctata tgacggcatt tatggctttt
     3721 tgtttggtta acataatcga tgattaccag aagttctcac tatatagaag gcactaaaag
     3781 ttataaactt ttagtgccta attaattatt ttagctacca aacaaacgac tccaaaaccc
     3841 ctttttaggt gtttctactt ccctgtcctc aggtccactc tctatttctt cagatagttt
     3901 atcatctctc tttaatacgt cttcgttttc actgtcatcc tttttcgctt tagttatgcc
     3961 cttatgattt aattctgctt ctattggttg tattttcttt tgttgttggt tgctattttt
     4021 atattcttca gtaaaagttg cttcttgcgg attaatgctt tgtctatcat tagtcgctgt
     4081 atcaaaagag taattaagct gtctttcttc ttctaattgg ttttctagtt tttgaatctt
     4141 tttattactt tctaaagcta atatttgttg attctccaac agtttattta atgtattaac
     4201 attgctattt tgttgatcta gttgtttagt taaattctca atatattttt catcattttt
     4261 agctctagtt tcaaagattt ctatttgctt ttctaattca tttacttttg tttttaatga
     4321 ctcaaaacta tttgaattat tgtatatatg cttttcaaac tctgcagtat tttcattaaa
     4381 tctttctttt tttattgatt ctttattttg cattgtcctt tctttcttag tgatcttttc
     4441 tataattttt aaacaatcat tatcattaat ataattaatt ccattttctt ttttaaaaga
     4501 tatatttaag tttttagcat tattaacaat agtttgttta gttacattca attcatcagc
     4561 aaccatttta atagttttca taacattcat ccttaggtac ataaattggt acctaaattt
     4621 taccacctaa caaatatttt ttcatctttc gacatctaaa tttactacct atttcactac
     4681 tttagtacct aattagccgt taaaaacttc tataggtggc taattaggta ctaaagtagt
     4741 gaatttttat cattttaaag ttacaatgtt ctttcaacta aacttaaaaa gctttatata
     4801 caatcttaaa agtgttaata ttactttgtg aatattaaaa gagtcgatac tattggcgta
     4861 gcatcgactc tcggtaataa aacgattcgc attcgtctgt ttatataatt ttttgatact
     4921 tgtattatat atatctaatc atataagtgc aagtacaaaa catataacct acgtaaaaat
     4981 tgttttatta cctctatcca aaaagtggaa atgaggtttt tattatgccc aattttgaga
     5041 aatacaattt atcacaagta aaaactgaaa gattttacca actgcctaaa tatttgttcg
     5101 aagatgcata ttttaagaaa atgtcagcag aagccaaaat tatgtatgca ttattaaaag
     5161 atcgtttcga attatccatc caaaatgaat gggtagatag aaataataac atttacttta
     5221 ttttcagtaa taaacatttg tgtgagtact taggttatgg agaacaaaaa atcataaaat
     5281 tgaaaaaaga gttagtaaat tttaatttat taactcaaga gcgtgttggc cttaataaac
     5341 caaatagatt atatttatta aaaccaaaat atgatattga agcaagtctt accaaggaac
     5401 ttccaaattc acagttccag aacaatgaat ttggaagttc tagaactgtg aatttaagtg
     5461 gtcaagaact tccaaattca cagtctaatg atactgagtt aaataatact aattatatag
     5521 aaaatgagga taatgatacg tatgatatga atgatattat atctaatact ttaataaata
     5581 ataatcatca ttcgaatcat acaaatcatc aaaaaactga atttaataat gacgccctta
     5641 agttccaagt actcgaagaa ttgccacaac aacttcaaaa ctatttaagt aaatttgaaa
     5701 ttagagaaat tcggattatt aaaagcgtat tactcaaagg gaaaaagtca tttaatactt
     5761 cacatgatac ttattatcgt ttagaagatg ttgagtttga aattgtaagt gtattgaaac
     5821 gttttaaagc gatgttgcta caaaaaaatg aaaccgttga agctatgcaa ggttatttaa
     5881 tgcaatccat taaagctgaa cttgaagaaa cacatgccct ttatatgcgc cgtaaaaaca
     5941 tgaaacaata taatatcttt aatcaataat tcaaatgatt ttataacaat caaagagaca
     6001 tcaaaatatt ccgttaaatc atctgacttt ttaactgatg acgacgaaaa aaatcaagaa
     6061 attttaagtg atctagaaaa ggtttgtatc gaaaacgtat gttaagttat ggtggaatgc
     6121 ttaaacagaa gcataaaatt ttaaatttag acgatgccga agacggcaat ttaattaata
     6181 caagtgataa agataaaaca acagatgaag aagaaaaggc acattcgatt acggcaattt
     6241 ggaatttcga aaagcaaaat tattatttaa gacattagtg ataactgatg tcttttttta
     6301 t
//
LOCUS       DAKPJH010000133         6207 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.133, whole genome shotgun sequence.
ACCESSION   DAKPJH010000133 DAKPJH010000000
VERSION     DAKPJH010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6207
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.133"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(276..1154)
                     /locus_tag="OY092_002377"
     CDS             complement(276..1154)
                     /locus_tag="OY092_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HCX1077297.1"
                     /translation="MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGVPTNGIQGFVR
                     HIFSAIHEIRPTHVAVCWDMGQSTFRNDMFDGYKQNRSAPPEELIPQFDYVKEISEQF
                     GFVNIGVKNYEADDVIGTLAQQYSTDNDVYIITGDKDLLQCINDNVEVWLIKKGFNIY
                     NRYTLHRFNEEYDLEPQQLIDIKAFMGDTADGYAGVKGIGEKTAIKLIQQYQSVENVV
                     ENIDALSAGQRNKINDNLDELYLSKRLAEIHTQVPIDSEALFEKMSFATTLNHILSIC
                     NEHELHVSGKYISSHF"
     gene            complement(1174..4614)
                     /locus_tag="OY092_002378"
     CDS             complement(1174..4614)
                     /locus_tag="OY092_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HCX1077298.1"
                     /translation="MINKEQLDLLYKLKKEVEKSRNEALLHTINQVIKKVYLQQYTCS
                     FVGHFSAGKSTLINLLIEQDILPSSPVPTTSNTAIVSVSDNHDIIANLPNQTYAKLSN
                     YDEVREMNRQNVDVESVEINFQSTKFENGFTLQDTPGVDSNVASHQSITEQYMYTSNM
                     IFYTVDYNHVQSELNFKFMKHINDVGIPVVFIINQIDKHQDDELSFSTFKSRVEKSIA
                     DWGIKLERIFYVSKFDHPENELEVLSTYLVSLDQHRETIEDYTLRTVEYITEAQLDYI
                     QSEIQEVLEDLGIEEAEFEQAFLNSQQHQAISEEAQLLNNPDELMAFLKNKRKNILEN
                     AYIMPHNMREMLRSYLESMSQDFNVGGFFNKKKKKLQIQQQRLLTATDALQEHVNQQI
                     RQPMREDMSFVTRFINKKEASDKVLNQHYDVKSEMIEALYQPQTSISNTYVLTFSDEV
                     VKAIKKYVEQQSTPIFKEIIENVQADELPTEESDDLKEYQRYTELNELRQSLTTKNYR
                     HYYIHLDESLDKLVDRQETTYQVATDNAQGNRDNQQLNQNTATTNMSIDIQKALDIIS
                     DVPLFKRTKQDIHETLTRIDNKLIKIGVFGTFSAGKSSLINALLGEHILVSSPNPTTA
                     ATTEISYGDESYITLKSQSQLLDEINAVVEYQDISFSTIEDFINSDLEKLKSHLNKNQ
                     LAFVHAVEKHYKLYVSMLENGEKHAINQQELKKWSAEDEYATFVKTVHIALMHDWLKG
                     KIIVDSLGLHSNNQRHTNETEQILTSSDLILYVSYFNHSFTDNDKAFIEHMKDMNQLN
                     ENQAFKMVINAADLAESQDDLEAVETYVSDALRQVHLQSDIFAVSSRNALQAEDKGID
                     QLKQSIQQFVDVDSKSILEQQMIHQLQQMDRSYVEMITEFETNKADISRRQQRLTDYK
                     DKQRLQHQLIDATLQHTDNEVEEQVYHLNARLKLQLLDDVKSVFNSQMTQNSDFNEEK
                     KVSTKVYLDQIHQRLFLEQSLITERIKKYFNKQLTEQIAPIVQQLADLHVIVNPQFNF
                     ESANIEQPLLHIDFNDMLNALPKQLTKRKILNPNGQRDIHESICQSTLGLLQPQMGLL
                     RQQLELYVKQMAVEAESQFESFEANIQTQINDLLAFDLDTTLINQLKDKHQQLKTILY
                     "
     gene            4918..>6207
                     /locus_tag="OY092_002379"
     CDS             4918..>6207
                     /locus_tag="OY092_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HCX1077299.1"
                     /translation="MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIY
                     KNKFFGDSDVKTHQTLNDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYV
                     FLDRNNQFVADQNAKHTYSNVMRSIHSSLFTENTIINYLVELTACWTIFMILSGTYLL
                     IKKHLISNKSKALRWQKWHAMIGVIIAIPVFVLVITGLPWSGFMGSKIAGMMDTNGDL
                     GQGELAINPPKSDLNELPWATRKNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVV
                     EQAQKSGIKKPFSIVYPSDRNGAFIVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLG
                     TIKYDDYGIIAKWFTWGIPLHEGHLFGILNKIINLFVCIALLVAIGMGFVSWIKRTKN
                     TAVKVPHRVKKPASISLIICLIVLGLLMPLFGLSLILV"
BASE COUNT         1941 a         1005 c          926 g         2335 t
ORIGIN      
        1 ttgcattaat acattgactc aaaaactaaa taattaaatc tcttttttaa atgaatgaag
       61 ttgtaactgt actattttgt agtgcatggt aatttatttg gatgaaatat aattctttaa
      121 ctctattgat taatcaaata tgtatctatc aaaattcgac ttatttattc actttgacat
      181 atccaaatac gcaaaaagac tatttctacc ttgtatcgat agaaatagtc tttttatact
      241 taattggttt aatttttcat aaaatcttat actttttaaa aatgagatga aatatatttt
      301 cctgaaacat gtaattcatg ttcgttgcaa attgataaaa tatgattaag cgttgttgca
      361 aatgacattt tctcaaaaag cgcttcacta tcaattggta cttgtgtgtg aatttcagcc
      421 agtcgcttcg ataaatatag ttcatctaaa ttgtcattaa tcttattacg ttgtccagct
      481 gataatgcat caatgttttc aaccacattt tcaacgcttt gatattgctg aattaactta
      541 atagccgttt tctcaccaat tcctttaaca cctgcatatc catctgctgt atcacccata
      601 aacgctttaa tatcgattag ttgttgtggt tcaaggtcat attcttcgtt aaaacgatgt
      661 aatgtatatc tattataaat gttaaaacct tttttaatta gccaaacttc aacattgtca
      721 ttaatacatt gcagtaaatc tttgtcgccc gtaataatat agacatcgtt atcagttgaa
      781 tattgttgtg ctaatgtacc tataacatca tccgcttcat agtttttaac gccaatattt
      841 acaaagccaa attgctctga aatttcttta acataatcaa attgtggtat caattcttct
      901 ggtggtgcag aacgattttg cttataacca tcaaacatat catttctaaa agttgattgt
      961 cccatatccc aacatacagc tacatgtgta gggcgtattt catgtattgc cgaaaagata
     1021 tgacgcacaa atccttgtat tccatttgta ggtacacctt gtgaattgta cataaattgt
     1081 ttatgaagac ttgtagcgta gaaatgtcta aataatagcg ccataccatc tacaagtaat
     1141 attttatttg gcatttaaaa cgttccttct ttcttaatat aaaatagttt tcagttgttg
     1201 atgtttatct ttcaattgat tgataagtgt tgtatctaaa tcaaatgcta ataaatcgtt
     1261 tatttgcgtt tgaatattag cttcaaaact ttcaaattgc gattcagctt ctacagccat
     1321 ttgctttaca tataattcaa gctgttgcct caataatccc atttgtggtt gtaataatcc
     1381 taacgtactt tgacaaattg attcatgtat atctctttgc ccatttggat tcaaaatttt
     1441 acgttttgtt aattgtttag gcaatgcatt tagcatatca ttgaaatcga tgtgcaataa
     1501 tggttgctct atattagctg attcaaagtt aaactgagga ttaacaatga catgtaaatc
     1561 tgctaattgt tgaacgattg gggcaatttg ctcagtgagt tgcttattaa agtatttttt
     1621 tatacgttct gtaattaaag attgctctaa aaacaatcgt tgatgaattt gatctaagta
     1681 tactttcgta gacactttct tttcttcatt aaaatcacta ttttgcgtca tttgagaatt
     1741 aaacactgat ttaacatcgt caagtagttg taattttaaa cgtgcattta aatgataaac
     1801 ttgttcttca acttcgttgt ctgtatgttg tagcgtcgca tcaattaatt gatgttgtaa
     1861 acgctgttta tctttatagt ctgttaacct ttgttggcga cgtgaaatat cagctttatt
     1921 tgtttcgaat tctgtaatca tctctacata agaacgatcc atttgctgaa gctgatgaat
     1981 catttgttgt tctaaaattg atttagaatc aacatcaaca aattgttgta tgctttgttt
     2041 taattgatca atgcccttat cttcagcttg caatgcattt cgacttgata cagcaaaaat
     2101 gtctgattgt aagtgtactt gtcttaatgc atctgataca tatgtttcaa ccgcttcaag
     2161 atcatcttga ctttctgcta aatcagcagc attaattacc attttaaatg cttggttttc
     2221 attcaactgg ttcatatctt tcatgtgttc tataaacgcc ttgtcattat cagtaaatga
     2281 atgattaaaa taactcacat acaatattaa gtctgaagaa gttaaaattt gctctgtttc
     2341 atttgtatgc ctttggttat ttgagtgtag ccctaaggaa tcaacaatta ttttaccttt
     2401 taaccaatca tgcattaatg caatgtgtac tgttttaaca aatgttgcat attcatcttc
     2461 tgcactccac tttttcaatt cttgttgatt aatggcatgt ttttctccgt tttccaacat
     2521 actgacatac aatttataat gtttttcaac tgcatgaaca aaagcgagtt gatttttatt
     2581 taaatgtgat tttaactttt ctaaatctga attaataaag tcttctatag ttgaaaaaga
     2641 tatatcttgg tattcaacta ctgcattaat ttcatctaat aattgcgatt gtgattttag
     2701 cgttatataa ctctcgtctc cataagatat ttctgtagta gctgctgtag taggatttgg
     2761 agaactgact aaaatatgct cgcctaataa tgcatttatc aaactacttt tacccgcact
     2821 aaatgttcca aatacgccta tttttattaa tttattatct atacgtgtta atgtttcgtg
     2881 gatatcctgc tttgtacgct tgaacaaagg cacatccgaa attatatcaa gtgctttttg
     2941 aatatctata gacatatttg ttgtagcggt attctgattt agctgttgat tatctcgatt
     3001 accctgagca ttatcagtag ccacttgata tgttgtctct tgtcgatcta ctaatttatc
     3061 tagagattca tctaaatgaa tatagtagtg acgataattc ttagtcgtca atgactgacg
     3121 cagctcattt aattctgtat aacgttgata ttcttttaaa tcatcacttt cttctgttgg
     3181 taattcatct gcctgcacat tttctataat ttctttaaaa atcggtgttg actgttgttc
     3241 aacgtatttc ttaatggctt taaccacttc gtctgaaaat gtaagtacat aagtattgct
     3301 gattgatgtt tgtggttgat ataaagcttc aatcatttcc gacttaacgt cataatgctg
     3361 atttaatact ttatctgaag cttctttttt attgataaaa cgtgtaacaa atgacatatc
     3421 ttctcgcatt ggttgacgaa tttgttgatt aacatgttct tgtaacgcat ctgtcgctgt
     3481 taataatcgc tgttgttgaa tttgtagctt tttcttcttt ttattaaaaa atccgccaac
     3541 attaaagtct tgagacatac tttccaaata acttcgtaac atttctctca tattatgcgg
     3601 cataatgtat gcattttcta aaatattttt acgcttattc tttaaaaatg ccattaattc
     3661 atctggatta tttaaaagtt gtgcctcttc actaattgct tgatgctgtt gactatttaa
     3721 aaatgcttgt tcaaactctg cttcttcgat acccaaatct tctaatactt cctgaatttc
     3781 agactgaata taatctagct gagcttcggt aatatattca accgttctta atgtataatc
     3841 ctctattgtt tctctatgtt gatctaatga aactagataa gttgataata cttcaagttc
     3901 attttcaggg tgatcaaatt tagatacata aaagatgcgt tctaatttaa tgccccaatc
     3961 agcaattgat ttttcaactc gagatttaaa cgtagagaat gacaattcat cgtcttgatg
     4021 cttgtcaatt tgattaatga taaacacaac aggtattcca acatcattta tatgcttcat
     4081 aaacttaaag ttaagttcag attgaacgtg gttatagtca accgtataaa atatcatatt
     4141 gcttgtatac atatattgtt ctgttattga ctgatgtgat gcaacatttg aatcaacacc
     4201 tggtgtatct tgcaacgtaa acccattttc aaatttagtt gattgaaaat taatttctac
     4261 agattcaacg tcgacatttt ggcgattcat ttcccttact tcatcataat tagataattt
     4321 ggcatacgtt tgattcggca aattagcaat aatatcgtga ttgtctgaaa ctgacacgat
     4381 agcagtatta cttgtcgttg gtacaggtga acttggtaag atatcttgtt caattaataa
     4441 atttatcagt gtcgatttac ctgcagaaaa atgtccaacg aacgaacatg tatattgctg
     4501 caaatatact ttcttaatta cttggttaat tgtatgtaaa agtgcttcat ttcgcgactt
     4561 ttcaacttct ttttttaatt tatataaaag atctaattgt tctttattaa tcatgttact
     4621 ttcccctttg gttcgttcac atagaaatgc ttgcttgtta aaacgaattc atacaatatc
     4681 gatatccatt taaacaaaga tcgttgaatg gctcgcattg tattatgttt aaattttatc
     4741 atagctgctt gataaaacat acgaataatc aattttcttc aaacattcca acttaaaagt
     4801 tcatttttct aaatatcaca aatcatcgtt aaatttttct agaaaataaa tattgtcaca
     4861 gtttgttcac acacgtcaca gaattgacac cgtataatag ccaattggga gggaaatatg
     4921 aaaaatacat ttaatccatt acaaagatta catttctatg cagcaatatt tattgctcca
     4981 ctgttaatca ctttaaccat ttcgggcatt ggttacttgt tctttccaga agttgaaaat
     5041 aatatttata agaataagtt ttttggtgac agtgatgtaa aaacgcatca aacattaaat
     5101 gatgcagtac atcaagttga acaacaatat gaaggattct ttgtaagtaa agttagcata
     5161 cttgatgaac catataacaa acgaattaca ctgagtgata tggcaggaaa tcaacgttac
     5221 gtctttctag atcgtaacaa tcaatttgtt gcagatcaaa atgcgaaaca tacgtattct
     5281 aatgtgatgc gaagtataca tagttctttg tttactgaaa atactattat taattattta
     5341 gtagagttaa ccgcatgttg gacgatattc atgattttat ctggtactta tttactcatt
     5401 aagaagcatt taatttctaa caaaagtaag gcacttcgtt ggcaaaagtg gcacgcaatg
     5461 attggagtta tcattgcaat tccagtattt gtattagtca taactggatt gccatggtct
     5521 ggttttatgg gtagtaaaat tgccggtatg atggacacaa acggtgacct tggtcaaggt
     5581 gaattagcga ttaatccacc taaatcagat ttgaacgaat taccttgggc tacacgtaaa
     5641 aataaacagc cagcttcatc cgaaaaaggt tcaagtggtc atcatggtaa tgcagcaatg
     5701 cctcaaacca aattagatta tcaaatatct attgataagg tcgttgaaca ggcgcaaaaa
     5761 tctggtatta aaaagccgtt ttcaatcgta tatccaagtg atagaaatgg tgcctttatt
     5821 gtatctaata ctagtaattc aggtgttact gggctagatg tatcacctta caaggaacaa
     5881 acactttatt tcgatcaata tagcggtaaa aagttaggta cgattaaata tgatgactac
     5941 ggtattattg ctaaatggtt tacatggggc attccgcttc acgaaggtca tttattcggc
     6001 attttaaata aaatcattaa tttatttgta tgtatcgctt tattagtagc cattggcatg
     6061 gggtttgtct cttggataaa gcgtacaaaa aatactgcag taaaagtacc acatcgcgta
     6121 aaaaaaccag catctatatc actcataata tgtttaattg tattaggatt attaatgcca
     6181 ttatttggat tatcacttat ccttgta
//
LOCUS       DAKPJH010000134         6144 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.134, whole genome shotgun sequence.
ACCESSION   DAKPJH010000134 DAKPJH010000000
VERSION     DAKPJH010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6144
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.134"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            257..2305
                     /gene="eap"
                     /locus_tag="OY092_002380"
                     /gene_synonym="map"
     CDS             257..2305
                     /gene="eap"
                     /locus_tag="OY092_002380"
                     /gene_synonym="map"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular adherence protein Eap/Map"
                     /protein_id="HCX1077300.1"
                     /translation="MKFKSLITTTLALGVLASTGANFNTNEASAAAKPLDKSSSTLHH
                     GHSKIQVPYTITVNGTSQNILSSLTFNKNQQISYKDLENKVKSVLYFNRGISDIDLRL
                     SKQAEYTVHFKNGTKKVVDLKSGIYTADLINTSDIKAISVNVDTKKQPKDKAKANVQV
                     PYTITVNGTSQNILSSLTFNKNQNVSYKDLEDKVKSVLESNRGITDVDLRLSKQAKFT
                     VNFKNGTKKVIDLKAGIYTANLINSSDIKSININVDTKKHIENKAKRNYQVPYSINLN
                     GTSTNILSNLSFSNKPWTNYKNLTSQIKSVLKHDRGISEQDLKYAKKAYYTVYFKNGG
                     KRVVHFNSKTYSANLVHAKDVKKIEVTVKTASKAKAERYVPYSIAVNGTSTPNLSDLK
                     FTGDPRVGYKDITKKVKSVLKHDRGIGERELKYAKKATYTVHFKNGKKKVINLNSKIS
                     QLNLLYVQDIKKIDIDVKTGSKAKADSYVPYTIAVNGTSTHILSKLKISNKQLIGYQD
                     LNEKVKSVLKHDRGINDIELKFAKQAKYTIHFKNGKTQVVDLKSDIFTRNLFSAKDIK
                     KIDIDVKQHTKSKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSTKLKSA
                     MANDQGITKHDIGLAERAVYKVYFKNGSSKYVDLKTEYKDRKVFKATDIKKVDIELKF
                     "
     gene            complement(2584..3870)
                     /locus_tag="OY092_002381"
     CDS             complement(2584..3870)
                     /locus_tag="OY092_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCX1077301.1"
                     /translation="MNPLAQSLNEQIQQSNATAFAMLSDLGQNMFYPKGILSQSAEAK
                     STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRD
                     NPELSIDNMSRPIVTNALTHGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRKGANL
                     QTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKA
                     LADKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPVRLDGATKEFFAWGF
                     RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDHEIEQN
                     IQTLKERYEVTKKVVYADQYRSYWQAYDFNSGYFMAIKVHDVDPEELRKHLIEKYSIG
                     VIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDDLR"
     gene            4070..4168
                     /locus_tag="OY092_002382"
     CDS             4070..4168
                     /locus_tag="OY092_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077302.1"
                     /translation="MMWWQEGMMTLITGGLLIIFRLWLELKWKNKK"
     gene            4411..4569
                     /locus_tag="OY092_002383"
     CDS             4411..4569
                     /locus_tag="OY092_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077303.1"
                     /translation="MKHLTKIFVVLAIILFIIGYYLQATNHESQGIKLLLAAIMFMIC
                     AFISRSND"
     gene            4846..5226
                     /locus_tag="OY092_002384"
     CDS             4846..5226
                     /locus_tag="OY092_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1077304.1"
                     /translation="MKIILKNNSDFPIYEQIKQQVKQNILKGHVVPGEHLPSMRELAK
                     DLQVSLITTKRAYEDLEKDGFVTTIRGKGTFVKEQDSSILKEKQFFTIENLVKELVNE
                     AQAIEMSLEELQDILTFIYEEESS"
     gene            5223..6119
                     /gene="pmtA"
                     /locus_tag="OY092_002385"
     CDS             5223..6119
                     /gene="pmtA"
                     /locus_tag="OY092_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtA"
                     /protein_id="HCX1077305.1"
                     /translation="MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTI
                     IRLIMDLYQPQTGVIRVLEEDMALNPIELKNRIGFVYAENYFNERWTTKQLEKMIAPF
                     YSNWDHQVFQFYLEKFDLPINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLD
                     PLARNELLEIIQQELIDENKTIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQ
                     RYQVVSGALEDLDEELAALLIYEEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENL
                     MVYLEKRKPKYHENIKLMEEGF"
BASE COUNT         2303 a          820 c         1034 g         1987 t
ORIGIN      
        1 tagataaata aagtcggaat taagggttag aggcgagtaa gccatttaca tttaaggctt
       61 aacatccata aaagcaaaca acttttttgc aactaagaat ttagcagtta atcaaaatta
      121 aaagaacttt taactgtatt aaagaattgt tgttaaagat aatttattat taatattcag
      181 ttaattcaaa aaacggagca gacctggcta taataaagtt gcaatcacga attacataaa
      241 aaaggagaga taatttatga aatttaagtc attgattaca acaacattag cattaggtgt
      301 tttagcatca acaggagcaa actttaatac taacgaagca tctgccgcag ctaagccatt
      361 agataaatca tcaagtacat tacaccatgg acattctaaa atccaggttc catatacaat
      421 cacagtgaac ggcacaagcc aaaacatttt atcaagctta acatttaata agaatcaaca
      481 aattagttat aaagatttag agaataaagt taaatcagtt ttatacttta atagaggtat
      541 tagtgatatc gatttaagac tttcaaagca agcggaatat acggttcatt ttaaaaatgg
      601 aacaaaaaaa gttgtcgatt tgaaatcagg tatctacaca gctgacttaa tcaatacaag
      661 tgacattaaa gctatcagtg ttaacgtaga tactaaaaag caacctaaag ataaagctaa
      721 agcaaatgtt caagtgccgt atacaatcac ggttaatggt acaagccaaa acattttatc
      781 aagcttaaca tttaataaga atcaaaatgt tagttacaaa gatttagagg ataaagttaa
      841 atcagtttta gagtccaata gaggtataac tgatgtagat ttaagacttt caaaacaagc
      901 gaaatttaca gttaatttta aaaatgggac gaagaaagtt atagatttga aagcaggtat
      961 ttacacagcg aatttaataa attcaagtga tattaaaagt atcaatatta acgtagatac
     1021 aaaaaaacat atcgaaaata aagctaaaag aaactatcaa gttccatatt caattaattt
     1081 aaatggtaca tctacaaaca ttttatcgaa cctttcattt tcaaataaac cttggacaaa
     1141 ttacaaaaat ttaactagtc aaataaaatc agtactgaag catgatagag gtattagtga
     1201 acaagattta aaatatgcta agaaagctta ttatactgtt tattttaaaa atggtggtaa
     1261 gagagtggta cattttaatt caaaaactta ctcagcgaat ctagttcatg cgaaagatgt
     1321 taagaaaatt gaagttacag ttaaaacagc atctaaagca aaagcggagc gttatgtacc
     1381 atactcaatt gcagtaaatg gtacatcaac accaaattta tcagatttaa aatttacagg
     1441 tgacccacgt gtaggctaca aagatatcac taaaaaagtt aaatcagtat tgaagcatga
     1501 tagaggtatc ggggaacgtg aattaaaata tgcaaaaaaa gcaacttaca cagtacattt
     1561 taaaaatgga aagaaaaaag tgattaattt aaactcaaaa attagccaac tgaatctact
     1621 ttatgttcaa gatattaaaa agatagatat cgatgttaaa acaggatcaa aagcgaaagc
     1681 agatagctat gtaccatata caattgcagt aaatggtaca tcaacacata ttttatcaaa
     1741 actaaaaatt tcaaataaac aattaatagg ttatcaagat ttaaatgaaa aagttaaatc
     1801 agttttaaaa catgatagag gtatcaatga tattgaattg aaatttgcga aacaagcgaa
     1861 gtatactata cactttaaaa atggaaagac acaagttgtt gaccttaaat cagatatctt
     1921 tacaagaaac ttattcagtg ccaaagatat taaaaagata gatattgatg taaaacaaca
     1981 cactaaatca aaaaaaataa ataaatctaa taatgtgaaa ttcccagtaa caataaataa
     2041 atttgaaaac atagtttcaa atgaatttgt gttctataat gcaagcaaaa ttacaattaa
     2101 tgatttaagt acaaaactta aatcagcaat ggcaaatgat caagggatta ctaaacatga
     2161 cataggactt gctgaacgcg cggtgtataa agtgtatttt aaaaatggtt cgtcaaaata
     2221 tgtagactta aaaactgagt ataaagatag aaaagtattt aaagcaactg acattaaaaa
     2281 ggtagatatt gaacttaaat tctaatcttt aattttataa taaggcatct cacaatcgtg
     2341 gggtgccttt tacatttgta gagatgtggt gcttgaatgc ttgaagtgat ttgccaaaag
     2401 ttatataaat ttgcaccaaa taaattaagt tttgttagga gagatgtata aaactaatta
     2461 ggtatagcgt ttgacaagtt gctgaataaa atatatctta tgatgcttta aaagaaggaa
     2521 taattttaaa aataaaaaac caataatccg agtcatattc atcagattat tggttgaagt
     2581 taattatctt aagtcatcta tcgctttagc aattgaatcg aagacatgtg ggatatcgtc
     2641 tttttctaca cagctaaatg caatacgaat atctgttgca tttagtgcaa taacaccaat
     2701 tgaatatttt tcaattaaat gtttacgaag ttcttcaggg tcaacatcat gaacttttat
     2761 tgccataaag tatccagagt taaagtcata tgcttgccaa tatgatcggt attgatcagc
     2821 atagactact ttcttagtga cttcatagcg ttcttttaat gtttgaatat tttgttcgat
     2881 ttcgtgatcg aattgcttat tatttttcag tacatgttta acagcgcttt gtgttggaag
     2941 cggtccgctg gaaatattgc ttctaataag accttttact ttggcttcta atacttcttt
     3001 agttgtttga tcagacgttc caaatgtcat aaatccaaca cggaatcccc atgcgaaaaa
     3061 ttcttttgtt gcaccatcta aacgaacagg taatattgca tttgaatgta aattagttaa
     3121 tgcagtaaat aatgattgag tatacacatc ttcatagaat aaaccatagt atgcatcatc
     3181 cacaacagct ataacttttg tacctttatc agctaatgct ttaattgcat cgacgatggt
     3241 agtcacttct ttatgcgtag gtgtgtaacc tgtcggatta ttaggataat ttaaaatcat
     3301 aatgacttta tctttattgt atgattgtaa agcttctact agtgaatcag tagtataatg
     3361 tccgtcttta tcaaagatag gatatgtttg aaggtttgca ccttttctcg tattgaaaac
     3421 aagtttgtaa ttaccccaat tatgctctgg taacaagata gtgtcacctt gatttacaaa
     3481 taaatcgcca actagagata aaccatgtgt taatgcattc gtaacaattg gtcgtgacat
     3541 gttgtcgatt gatagctctg gattgtcacg caacattttt tgttgccata aatcacgtaa
     3601 ttcttcgatg ccttgtggtg gcgcataagg gaatatttca tctggagtta aatcattaaa
     3661 cattgcatct aaagatgatg caaacatttt tccgtctttg tttgtcgcca tacctatagt
     3721 tgcattatat gttgtactct ttgcttcagc agattgagat aaaatgcctt ttggataaaa
     3781 catattttga cctaagtcag ataacattgc aaaggcagtt gcatttgact gttgaatttg
     3841 ttcatttaag ctttgggcta aaggattcat tattgcttaa cctctcttta aaaaaattgt
     3901 atgcctatat attatcttca attataccaa atataaagtg ttgttggtga attaacgaat
     3961 aatatgtaaa atctgctacc aaaatacgaa catatgttct gtttttgtgt tagaatatgt
     4021 ataggtcatc cttcagtatg atactttagt cgaacggagg tgtagtgtaa tgatgtggtg
     4081 gcaagaaggg atgatgacac ttattacagg tggcttacta attatttttc gactttggtt
     4141 agaactgaaa tggaaaaata aaaaatgatc ctacacacat aaataacccc aagtctgctg
     4201 gtaccagact tggggttgtg tagtataatt ctgtggatac acttaaataa tatcattgaa
     4261 cacaatatat cgcaatcaat aatcattttg attgaatggt tttgttgcgc tattttagtt
     4321 gaaagtgatt agtaccttga acttttgaaa ttcaataact tattaaaaaa atttatattt
     4381 gttataatgt cgatgttgag gtgaaataaa ttgaaacatc taacaaaaat atttgtagta
     4441 cttgcaatta ttttatttat tattggttat tatttacaag caactaatca tgaaagtcaa
     4501 ggtataaaat tattattagc agcgattatg tttatgattt gtgcttttat aagtagaagt
     4561 aatgattgac gtaaaaatag taaataggat tgactgttta aaacgattgt ttatgttgac
     4621 gctacggttg tcacgtagag attaaagaca ttcgttttag cagtcttttt tattgaagta
     4681 gacaatgcaa gattaaatgg tagtgtcatt tcattttatt caactgctag taatacaata
     4741 ctcagtgtta tttctgaaga ctggttgata atgagacatg catatttaca aaactgtgta
     4801 tattgtgtat attgtatata tacagaaggc gataggggga cgttgatgaa aataatttta
     4861 aaaaacaata gtgattttcc gatttatgaa cagattaagc aacaagtaaa acaaaatatt
     4921 ttaaagggac atgttgttcc tggagagcat ttgccgtcaa tgagagaact tgccaaagat
     4981 cttcaagtaa gtttgattac taccaaacgt gcttatgaag atttagagaa agacggtttt
     5041 gttacaacaa ttagaggaaa agggaccttt gttaaggagc aagatagttc tattttaaaa
     5101 gagaaacaat tttttaccat tgaaaatttg gttaaagaat tggttaatga agcgcaagca
     5161 atcgaaatgt cacttgagga acttcaagat attttaacgt tcatctatga ggaggaatca
     5221 tcatgaatgc catagaatta agtaatgtta attattcaag tgatcagttt aatttaaaga
     5281 atatctcttt caaagttcct caaggtttcg tcactggttt tattggtaga aatggcgctg
     5341 gtaaaaccac aataataagg ttaattatgg atttgtatca accacaaact ggtgttatta
     5401 gagtattaga agaggatatg gctctcaatc cgatagagtt aaagaataga attgggtttg
     5461 tttacgctga aaattatttt aatgagagat ggactacgaa gcaacttgaa aaaatgattg
     5521 ccccttttta tagtaactgg gatcatcaag tatttcagtt ttatcttgaa aagttcgatt
     5581 taccaatcaa taaatcaata aaaacatttt caactggcat gaaaatgaaa ttatcattag
     5641 cagttgcatt ttcacatcat gctgaattgt atatttttga tgagcctact tcaggtcttg
     5701 atcccttagc tagaaatgag ttattggaga taattcagca agaattaatt gatgaaaata
     5761 aaacaatatt catgtcgaca cacattatct cagatttaga aaaaatagct gattatatca
     5821 ttcacttaag tgacggtgaa gttatcttaa atggttcaaa agaacaactg ttacaaagat
     5881 atcaagttgt gagtggagcc cttgaagatt tagatgaaga attggctgct ttgctgattt
     5941 acgaagaaca taagcgtacg ggatttatag gattaacaga acatgcacaa gtatttaaag
     6001 aaattttagg tcataaagtg aatatcacta caccttctat tgagaactta atggtttatc
     6061 ttgaaaagag aaaacctaaa taccatgaaa acatcaaatt gatggaagaa ggtttttaaa
     6121 tgaaggcatt gttaattagg aatt
//
LOCUS       DAKPJH010000135         6121 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.135, whole genome shotgun sequence.
ACCESSION   DAKPJH010000135 DAKPJH010000000
VERSION     DAKPJH010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6121
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.135"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(46..249)
                     /locus_tag="OY092_002386"
     CDS             complement(46..249)
                     /locus_tag="OY092_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499941.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077306.1"
                     /translation="MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETE
                     EYYQIIDNSGLVGGYYKTYFKEV"
     gene            complement(278..1087)
                     /locus_tag="OY092_002387"
     CDS             complement(278..1087)
                     /locus_tag="OY092_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCX1077307.1"
                     /translation="MCGLRSITLGTTNIEQTKHFMVDILGLNYEELLENSIRFGDADI
                     SPGTRLQFIQVPSEQLEESHFVGIGLRTPTDSGLEEYAEILSNKDIPFTTVKELNGNK
                     YFSLEDNNGHIFSIYSNENNYGVGLGMPSFESAVNPLHQVQGLGPVILKVNHVDITGQ
                     ILTNIFGLEVFAEYQPFDNADYHVQVFKVGTGGLGGEIHLMPVETEMTMPEYGAVDQV
                     EFETKDADFFNQAKSRLDEVEIPYQTLEQDDIESIRITENSGLSFIFTLQK"
     gene            complement(1667..2935)
                     /gene="sucB"
                     /locus_tag="OY092_002388"
     CDS             complement(1667..2935)
                     /gene="sucB"
                     /locus_tag="OY092_002388"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HCX1077308.1"
                     /translation="MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVN
                     VEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKK
                     EETTNNSVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDID
                     KKQQAPASTQTTQQAPAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLT
                     TFNEVDMTNVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDD
                     MITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVN
                     GSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYD
                     HRIIDGKEAVGFLKTIKELIENPEDLLLES"
     gene            complement(2949..5747)
                     /locus_tag="OY092_002389"
     CDS             complement(2949..5747)
                     /locus_tag="OY092_002389"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HCX1077309.1"
                     /translation="MTNERKEVSEAPVNFGANLGLMLDLYDDFLQDPSSVPEDLQVLF
                     STIKNDDSIVPALKSTSSQNSDGTIKRVMRLIDNIRQYGHLKADIYPVNPPKRKHVPK
                     LEIEDFDLDQQTLEGISAGIVSDHFADIYDNAYEAILRMEKRYKGPIAFEYTHINNNT
                     ERGWLKRRIETPYKVTLNNNEKRALFKQLAYVEGFEKYLHKNFVGAKRFSIEGVDALV
                     PMLQRTITIAAKEGIKNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPED
                     GSLQLTAGWTGDVKYHLGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDD
                     TQRAGAPTTDHHKAMPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIG
                     FTTEPIDARSTTYSTDVAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDL
                     VGYRRFGHNEMDEPSITNPVPYQNIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQ
                     KELRQAHDKINKADKMDNPDMEKPAELALPLQADEQSFTFDHLKEINDALLTYPDGFN
                     ILKKLNKVLEKRHEPFNKEDGLVDWAQAEQLAFATILQDGTPIRLTGQDSERGTFSHR
                     HAVLHDEQTGETYTPLHHVPDQKATFDIHNSPLSEAAVVGFEYGYNVENKKSFNIWEA
                     QYGDFANMSQMIFDNFLFSSRSKWGERSGLTLFLPHAYEGQGPEHSSARLERFLQLAA
                     ENNCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTSG
                     GFEPILTESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIE
                     ALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLVADKYDLSYHGRIQRAAPAEGDG
                     EIHKLVQNKIIENALKNN"
BASE COUNT         1766 a         1147 c          932 g         2276 t
ORIGIN      
        1 ctaattgaaa atctcatatt aggcttcatt tcaataatta tgcgtttaaa cttctttgaa
       61 atatgtttta tagtaaccgc caactaatcc agaattatct attatttgat aatattcttc
      121 agtttcgttg ataacatcat attgtttgcc aaccgttaac atgtcagaaa ctgtaaattt
      181 ctttgcatct gtattaatga cttctacttt cttgattggt gtacgttctt tccaagtttc
      241 atgtaacata aattttgtcc tcactatcgt aaaaaaatta tttttgtaaa gtgaatataa
      301 acgataatcc actgttttca gtaattctaa ttgattcaat atcatcttgc tcaagcgttt
      361 gatatggtat ttccacttca tctaagcgcg atttcgcttg attaaagaaa tctgcatctt
      421 tcgtttcaaa ctcaacttga tcgactgcgc catattccgg cattgtcatt tcggtttcta
      481 caggcattaa atgtatttcg ccacctagac cacccgttcc aactttgaat acttggacat
      541 gatagtcagc attgtcgaag ggttggtatt ctgcaaatac ttcaagtccg aatatatttg
      601 ttaaaatttg acctgtaata tctacatgat tcactttaag aatcactggt cctaaacctt
      661 gcacttgatg taacggattg accgcactct caaaagaagg catacctaaa ccaacgccat
      721 aattattctc gtttgaatat attgagaaaa tatgaccatt gttatcttct agactgaaat
      781 atttattgcc atttaattct ttaactgttg taaatggaat atccttattc gataatattt
      841 ccgcatactc ctctaaacct gagtcagttg gtgtacgtaa tccaataccc acaaagtgag
      901 attcttctaa ttgctcactt ggaacttgta taaattgaag tcttgttcct gggcttatat
      961 ctgcatcgcc gaaacgaatt gagttttcaa gaagttcttc ataatttaat cctaatatgt
     1021 caaccatgaa atgttttgtc tgttctatat ttgttgtacc taatgttata cttctaagtc
     1081 cacacattat agccacctct atctttatct ttactattat attataactt attttaatca
     1141 taaattatag aatatcggtc agttgatttt gattatagat taatatgtga aaaatgtatt
     1201 tctttaaaag aactatttca tttaaatagg taacataata ttgttatggt tgctattgag
     1261 tatgtcatta atgagtatct gtatatagca attgaatatt tcgttttatg tagtacataa
     1321 aaaacatata catgtcgtat ccataaagtg aatttacatc ttgttcagat gattttaaat
     1381 taactaaagg cgcttataga attcataaat ttcatcgctt gttattatct aaaatgattt
     1441 cattagcata ttgaaacacg ccattccacc tatatttcta ttgtgagtct atttcaataa
     1501 aaatgatata ttttttaagt tgtcaaaatt aaactcacat tttaatacga agcattataa
     1561 aaataaagta cagcagtaag atatttcgac tagaaaataa tcttactgct gtttgttatt
     1621 gatttgatta cgtttttagg aatagtaaac tattttgtgt tgtggattaa gattctaata
     1681 ataagtcttc tgggttttca attaattctt taattgtttt taagaatcca actgcttctt
     1741 taccgtcaat aattctatga tcatagctta atgcaatata catcattgga cgattttcga
     1801 ttgtatcttg atcaatcgca attggtcttg taataattga atgcatgcct aagattgcag
     1861 cttgattacc attgataatt ggcgtactca tcattgatcc aaaaataccg ccatttgtaa
     1921 tcgtaaatga accattaacc atatcatcta agccaagttt tttctctcgt gctttaacag
     1981 ctaaattagc aatttctgct tcgatttctg caaaattctt tttatcacaa tctcttacaa
     2041 atggtactaa taatccatca tctgtagaaa cagctacacc aatatcataa tattgtttcg
     2101 taatcatgtc gtcgccgtcg atttctgcat taacttctgg atactttttc aaagctgcta
     2161 ctgaagcttt agtaaagaat gacataaatc ctaatttagt accatcatga tctttcataa
     2221 attgttcttt cttacgttta cgcaattcca taacatttgt catgtcaact tcgttaaatg
     2281 ttgttaacat agctgtatta ttagatacct ctaataattt tttggcagct gttttctttc
     2341 tgcgtgacat tttttcacga atcactggtt ttgtaggata ttgattgtat tttttctctt
     2401 cttttgcagg tgcttgttgt gttgtttgtg ttgatgccgg tgcctgttgt ttcttatcaa
     2461 tatcttcttt acgaaccaca tcatttgttt ttggacttac ttcagcaaga ttgacaccat
     2521 tttcacgagc atatcgacgc gcagaaggcg tagcattaat acgttgctga ttgtcatcat
     2581 ttgcttgatt gacttcagct ttatctaccg aattatttgt tgtttcttct tttttattat
     2641 ttgtttcttc attttgttgt ggagtattgt cgttactatt ttctttagaa gcattgccac
     2701 taccttcgcc gatgatagca attgcttgcc caacttctac agtgtcgcct tcacttgcaa
     2761 gttgttcaga taatacacct gcttcttcag atacaacttc gacattaact ttatcagttt
     2821 ctaattcaag aatagcttca cctttttcta cgctatcccc tacgtttttc aaccattctg
     2881 caatggtacc ttctgtaata gattctgcta attctggaac tttaacctct ggcatgactt
     2941 atttccccct agttattttt taatgcattt tctataattt tattttgaac aagtttatga
     3001 atttctccat cgccttcagc tggagcagcc ctttgaattc tgccatgata acttaaatca
     3061 tatttatctg caactagcac tttaacatat ggatagacat ataaccatgc accttgattt
     3121 ttaggttctt cttgtaccca tgacacttct tcaaggtttg gcaattgtgc tagtaatgct
     3181 tcaatctctt cctctgggaa tggatacaat ctttcaatcg caacgagtaa cactgattcg
     3241 tctggatttt tagctaatgc ttcttttaaa tcaatgaaca ttttaccagt tgctaaaata
     3301 acttttgtaa ccttatccgc ttgatatgat tctgtcaaaa ttggctcaaa tccaccagaa
     3361 gtaaattcat caattggttt tgcaactgtt ttatttctca gtaagctttt tggtgacata
     3421 acaaccaatg gtcgcatttg ttcagaatct aaactagctg cttgtgcacg caataagtgg
     3481 aaataattac ttgaactaga taagttgaca actgtgcaat tattttcagc agctaattgt
     3541 aaaaatcgct ctaatcttgc tgatgaatgt tcaggacctt gaccctcata tgcatgaggt
     3601 aagaataatg ttaatcctga acgttctccc cattttgagc gagaactgaa taagaagttg
     3661 tcaaaaatca tttgtgacat atttgcaaaa tcaccatatt gcgcttccca aatattgaag
     3721 ctttttttgt tttccacatt atagccgtat tcaaaaccaa ctactgctgc ttctgaaagc
     3781 ggagaattgt gtatatcaaa tgtcgctttt tgatcaggaa catgatgtaa aggtgtatat
     3841 gtttcacctg tttgctcatc atgtaacacg gcatgcctat gactgaatgt accacgttca
     3901 ctatcttgac cagttaagcg aatcggtgta ccatcttgta aaattgtcgc aaatgcaagt
     3961 tgttctgctt gtgcccaatc aactaagcca tcctctttat taaacggctc atgacgcttc
     4021 tcaagaactt tgtttaactt tttcaaaatg ttaaagccat ccggatatgt taacaatgca
     4081 tcatttattt ctttcaaatg atcaaacgta aatgattgtt cgtctgcttg taacggtaat
     4141 gcaagttctg caggtttttc catatctgga ttatccattt tatcagcttt attaatttta
     4201 tcatgtgctt gtcttagttc cttttggact tgttctataa atgaatgcat ttcatcttct
     4261 gaaatgacac cttcattaac aagcttttta ccaaacacat attcaacaga gtcatgtttg
     4321 cgaatattct gataaggaac tggattagta attgatggtt catccatttc gttatgaccg
     4381 aaacgacgat aacctactaa atcaataacg acgtctttat gaaactcttt tctaaattcc
     4441 attgcaatat caattgcttc aatagtagct tcaacgtcat cagcattgac atggaatatt
     4501 ggcacatcat aacctttggc cacatctgta gaataagttg ttgaacgtgc atcaattggt
     4561 tctgtagtaa atccaattct attgttagta ataatatgca atgaaccacc cgtagaatag
     4621 cctttcaagt ttcctaagtt cattgtttcg aagttaattc cttgaccagg ataagcagca
     4681 tcgccatgta taataattgg cattgcttta tgatgatcag tcgtcggagc cccagcacgt
     4741 tgtgtatcat cttgtgctgc tctcgtacgc ccctcaacaa caggtgcaac aatttccaag
     4801 tgacttggat tgttagccag tgcaatacgc tgcattgtac cgtatgaatc agtagtttta
     4861 atgccaccaa ggtgatattt cacatcacca gtccatccag cagttaactg caagctacca
     4921 tcttcaggta agaatttcat tggatctgta tgcataaatt ctgaaatcat catttcgtac
     4981 ggtttttcta agacatgcgt taaaacgttt aaacgtccac ggtgagccat gcctatttgt
     5041 atatttttaa taccttcttt cgcagcaatc gtaatagtac gttgtaacat cggtacgagt
     5101 gcgtctaccc cttcaattga aaaacgcttt gcaccaacga agtttttatg aagatatttt
     5161 tcgaaccctt caacatacgc taattgttta aatagtgccc ttttttcgtt gttatttaac
     5221 gttactttat atggcgtttc aattcttctt tttaaccaac cacgttcggt attgttatta
     5281 atatgtgtat actcaaatgc aattggtcct ttgtaacgtt tttccattct taaaattgct
     5341 tcataagcat tatcataaat gtcggcaaag tgatctgaaa caattcctgc tgatatacct
     5401 tccaaagtct gttgatctaa atcaaagtct tcaatctcta atttaggtac atgtttcctt
     5461 ttcggaggat ttacaggata aatatcggct ttaagatgcc cgtattggcg aatattatca
     5521 attaaacgca tgacacgttt aattgtgccg tcgctatttt gactacttgt actttttaaa
     5581 gctggtacaa ttgagtcatc attcttaatt gtgctgaata agacttgtaa atcttctggt
     5641 acagatgatg gatcttgtaa aaagtcatca tatagatcta acattagacc taaattcgca
     5701 ccgaagttta caggagcctc tgaaacttct tttctttcgt tagtcatttt acaccctcca
     5761 caaaaatgtt gaaacgctta caatgtaata atatcactat ttagttattt gttaaagtag
     5821 atttacctat ttatctgcta aaaagaagaa tcaacaaaag cgttgattct tctaggttta
     5881 tagatgtatt ttattgtaaa ttttgggcgt acaacagaaa tgataaagaa ccactgttta
     5941 tttgttttat agtcgttctt gggagtggga cagaaatgat attttcgcaa aatttatttc
     6001 gtcgtcccac cccaacttgc attgcctgta gaatttcttt tcgaaattct ctgtgttggg
     6061 gcccatcccc aacttgcaca ttattgtaag ctgacttttc gtcagcttct gtgttgggcc
     6121 c
//
LOCUS       DAKPJH010000136         6099 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.136, whole genome shotgun sequence.
ACCESSION   DAKPJH010000136 DAKPJH010000000
VERSION     DAKPJH010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6099
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.136"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            87..722
                     /locus_tag="OY092_002390"
                     /pseudo
     CDS             87..722
                     /locus_tag="OY092_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            709..1011
                     /locus_tag="OY092_002391"
     CDS             709..1011
                     /locus_tag="OY092_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077310.1"
                     /translation="MRTNNHITDLDAIELSSAWNYNSKLVTGKNALLSDSLLRDIKVL
                     SSNAKGDADMLETELHAVINAMSQNKGKSVDALKNSTASLKNNLTKLKEQLDKTTH"
     gene            1162..1521
                     /locus_tag="OY092_002392"
     CDS             1162..1521
                     /locus_tag="OY092_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077311.1"
                     /translation="MILRYVTNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELV
                     KYVGIAEATTAALYSASFINKNISRIASLSTIGILSVATYKHFEAGQGKKGAQHALDL
                     LGLATLSLLDTFSCNKK"
     gene            complement(1606..2217)
                     /locus_tag="OY092_002393"
     CDS             complement(1606..2217)
                     /locus_tag="OY092_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HCX1077312.1"
                     /translation="MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPF
                     SFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLA
                     YGDSELSRTKLSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
                     HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGLFTIDRPEK"
     gene            complement(2296..2772)
                     /locus_tag="OY092_002394"
     CDS             complement(2296..2772)
                     /locus_tag="OY092_002394"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HCX1077313.1"
                     /translation="MAVVYVAGGCLWGVETFFATIPGIIHTEAGRANGRSSKLDGPYD
                     GYAECVKLHFDDRMLTITDIMNYLFEIIDPYSVNQQGNDIGEKYRTGLYSCVDDHLIE
                     ARQFIERRKDRDQIAVEVLPLSNYIKSAEEHQQHLEKYPEDMHMCHISKDLLNKYK"
     gene            complement(2775..3275)
                     /locus_tag="OY092_002395"
     CDS             complement(2775..3275)
                     /locus_tag="OY092_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077314.1"
                     /translation="MVLRKVTMQDLDQIIALENIGFSPEEAATPEALKLRIEQIQETF
                     IVAEKNDEVIGYINGPVIKERYISDDLFKNVSTNNSEGGYISVLGLVVAPNYQGQGIA
                     GRLLNYFENLAKNQHRHGVTLTCRESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNI
                     KKDDEV"
     gene            complement(3510..4277)
                     /locus_tag="OY092_002396"
     CDS             complement(3510..4277)
                     /locus_tag="OY092_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HCX1077315.1"
                     /translation="MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHL
                     HPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRS
                     KYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
                     QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYS
                     NDIEALLRNASSVINDNFVYLDRPTKPGKVKSFLKWF"
     gene            complement(4274..4966)
                     /locus_tag="OY092_002397"
     CDS             complement(4274..4966)
                     /locus_tag="OY092_002397"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HCX1077316.1"
                     /translation="MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSI
                     VITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLL
                     NWSTYQDSIISTEIEDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
                     VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKS
                     ASYYAYYGTDES"
     gene            complement(4983..5645)
                     /locus_tag="OY092_002398"
     CDS             complement(4983..5645)
                     /locus_tag="OY092_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein
                     CapA"
                     /protein_id="HCX1077317.1"
                     /translation="MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKY
                     TASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAEL
                     NSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAH
                     DNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQ
                     KF"
BASE COUNT         2033 a         1080 c          868 g         2118 t
ORIGIN      
        1 atattttagt ttttgtataa tttgcctatc aactgaaaaa acagctaata caaaggagct
       61 aatgaagata tgagaaaaat tatgcgaacc ttattatgca catcaatcat attcaactcc
      121 aattactttt tgttgagtct ggaaatggca taactatttc aacatttaca cctggtcata
      181 taaatgaaac atcagcggca gttgcagcca tgatgtacaa acgttatgaa catgaaattg
      241 aacaagctcg attaaaattc aaatcagaag ttgagaaaaa tggttattat gccatgaata
      301 aaaaacttca aaagaagcaa gaattcaatg gtgttactaa acaatttttg aatttcaaca
      361 cagacagtat cgatgactta aaaaagttta aacaagaatt caaacctgtt atgcacttaa
      421 aaggagaagc gtttaatcaa caattacaat ctttgattaa taaatatcct caaatacaaa
      481 aaaatatgaa atcagagttc attgcttatt atgataaaga aaaaaataga gaaacagtaa
      541 aaaactatgc ttggaacctt caaaaatcta taaatgacgt tatgcaatca tatcctagca
      601 caaaatttgt acagttttat aaagatgata tttccccgtc aatggtagat ggaaatggcc
      661 gtttaaaatc ggatactaat gtaatttcca acgagggagg aaagtatgat gagaacaaat
      721 aatcatataa ccgatttaga tgctattgaa ttaagcagtg cttggaatta caattcgaaa
      781 ttggtgactg gcaaaaatgc actactatca gatagccttt taagagatat taaagtatta
      841 agttctaatg ctaaaggtga cgcagacatg ttagaaactg aacttcatgc tgttataaac
      901 gcaatgtctc aaaacaaagg taaatctgtt gatgcactta aaaatagtac cgcttctcta
      961 aaaaacaatc taaccaaatt aaaagagcaa ctcgataaaa ccacacatta aattcatata
     1021 ttttgagtga atagaattat atttccatag caaatattcc tgaactacac atgttacata
     1081 agagattcat ttttgaagaa acgggtaaaa tgataaagta attatctttc acaaaaatcc
     1141 aaatattggg aggaattaaa tatgatttta cgttacgtga ccaatttaaa acttgcgaaa
     1201 gagctatacc aagccagtaa acctaaattg caagaagata agggtatgat tgaactgttt
     1261 gagcatactt ttggcttgca aaaagaactt gtaaaatacg tcggcattgc agaagcaact
     1321 actgctgctt tatactcagc tagctttatc aataaaaaca tttctcgcat tgcttcgcta
     1381 tcaacaatag gtattttaag tgtagctact tacaaacatt tcgaagctgg ccaaggtaaa
     1441 aaaggtgcac aacatgcatt agatttatta ggtcttgcta ctttaagttt actagataca
     1501 ttttcttgta ataaaaaata gtcttcattt tagaagcaca tactttagca cctgtgtact
     1561 tttgattcaa ttcataaacg gtacaccgct atagcatgtg ttttgttatt tttcaggtct
     1621 atctattgta aataatcctc ctaatttagc ataatcattt ccggctaaac gagaaacagc
     1681 ctgtaatgcg tgtggattga ttttaaaatc accctcataa atactgtcat caatatgata
     1741 agttacaatt tcgcctatta ttaagtcagc cccatctaat acatctccaa gcaatatcat
     1801 ttgcgatagt ttacattcga atctcatttt cgcgtcttta attcctggcg tcttaatcgt
     1861 tgtagatgtt aaaagtgata attttgtacg actcaactca ctgtctccat atgctaacgg
     1921 cgctgcagtc tcattaatat cttgaacatt atcttcgtct gtaatatgca caacaaagtc
     1981 tccagtccgt tctatattca atgcagtatc ttttctctta cctcctgcac gttgaactgc
     2041 aatagcaatc attggcggat ggttattaac aatattaaaa aagctaaatg gtgctgcatt
     2101 tactgatgca tcttgattta atgttgtaac aaatgctata ggtcgtggaa taattgaacc
     2161 aattaataat ttatagtttt ctctagcagt taatgattgt gcatcaaacg tatacataat
     2221 acctacctct tttctaagta tatctaggta tttctccgat tttggttaat ttaaacatct
     2281 attctcctct gaaaatcact tgtatttatt tagcaaatct tttgaaatat gacacatatg
     2341 catatcttct ggatattttt ctaaatgttg ctgatgttct tcagcacttt taatgtagtt
     2401 agacagcggt aagacttcca ctgcaatttg atctctgtct ttacgtcgtt caatgaactg
     2461 acgcgcttca attaagtggt catctacaca actatataaa cccgttcgat acttttctcc
     2521 aatatcattt ccttgttgat tcacactgta aggatcaatg atttcaaata aataattcat
     2581 aatgtctgta attgttaaca tacgatcatc gaaatgaagt ttgacacatt cagcataacc
     2641 atcatacgga ccgtctaatt tagagcttct tccatttgct cttcctgctt ctgtatgtat
     2701 aattccaggt attgttgcaa aaaatgtttc aacaccccat aaacatcctc ctgctacata
     2761 aacaactgcc atatttacac ctcatcatcc ttttttatat ttttaacaag gttataccat
     2821 ttaataccgc catgacatga ttctgataca ccttcattac gatacccata tttttcataa
     2881 aaagaaatta atgattctcg acatgttaac gttacaccat gtcgatgttg attcttagca
     2941 agattttcaa aatagtttag taagcgacct gcaataccct gaccttgata atttggtgct
     3001 acaacaagac ctaacacact aatatagcca ccttcactat tatttgtgga gacattttta
     3061 aataaatcat cgctaatgta acgctctttt atgactggac cattgatgta tccaattact
     3121 tcatcattct tttcagctac aataaaagtt tcttgaattt gttcaattct caatttcaat
     3181 gcctctggtg ttgcagcttc ttccggtgaa aaaccaatat tttcaagtgc aataatttga
     3241 tctaagtcct gcatggttac ttttcttaat accataaaaa cacttcctta gccctatata
     3301 tcaaaagtaa taccttcatc tttatattca ttattttcaa gctaccttca ctataaaaaa
     3361 cgagtctttt tattaaaagc cattcgcctt aatcaattag acaagttgtt ttatacgaat
     3421 tagcaaataa tcatgattat aattcatttt aagcatactc aaaaagactg gtacatgtat
     3481 accagtctaa ttcgaaaaaa tatatttagt taaaaccatt tcaaaaacga cttcactttt
     3541 cctggcttag tcggtctgtc taaataaaca aaattatcat tgattactga actggcattt
     3601 cgaagtaatg cttcaatgtc attcgaatat ttcttcaatt tatgattgtg aaataattct
     3661 tgcatcaaaa atggtctttg gtcacatgaa tgtgcatctg aagctacaaa atgagccaaa
     3721 ttacattcta taaattgtaa tgataacttt tgaatgtttt ttccaaatcc accaactaaa
     3781 gaactcgatg ttaattgact caatgcccca tttgcaacaa gttcatataa tatttctgga
     3841 tttttggcga tacttctatt tctttcagga tgtgcaatga ttggtatgta acctctcgat
     3901 tgtatttcaa aaaacaattg ttttgtataa tgtggtactt cgcccgttgg aaattcaatt
     3961 aataaatatt tcgaacgatt aataccttga atactaccat tatctaagcc ttgcagaatc
     4021 gaatctgtaa ttctaatttc ttgcccggga aataatttaa tatccaatgc ttgaacttct
     4081 ggatgcgttc ttaactccgc caatttcaca agcacttgtt gaaatgtatt atcatatctc
     4141 ggatgcaaat gatgaggtgt cgctacaata cttgttacac cttcatcctt agcttgcttt
     4201 aatagtgcaa tactcttttc aattgtttta ggaccatcat ctatatcaac taatatatgg
     4261 ttatgaatat caatcatgat tcatcagtcc cataatatgc atagtaacta gcacttttat
     4321 ctttaggcat tctatttaag actacaccta ataatttagc acctgttgct tcaataagtt
     4381 cttttccttt tttaacttca tctttattat tattttccga attaactacg tagacaacat
     4441 tgccggtaaa ctttgaaaat aattgcgcat ctgtaactgt gttcactggc ggcgtatcga
     4501 taataacaaa gttataattc atcaataatg tgtcatacaa atttgcaaat gctcttgatg
     4561 tgattaactc tgatgggttt ggcggaatcg gtccagacgt caggacgtct aaatcttcaa
     4621 tttcagttga gataatactg tcttgataag ttgaccaatt tagcaataaa cttgataggc
     4681 cttcattgtt tggtaaatta aaaatatagt gctgcgtagg tttacgcata tccccatcta
     4741 cgattaatgt tttataacct gcttgtgcat atgcaactgc taaatttgct gcaattgtag
     4801 acttacctgc gcctggtgcc tctgaagtga ttacaatgct ttgaactgca ctgtcaggat
     4861 ttgcaaacat aatatttgat cttatgcctc gaaatttctc gctaataggt gactttggtt
     4921 gttcatggac aattaaactt gatgtacttc ttcgtgtatt cgtcatggta attcctcgta
     4981 aattaaaatt tttgtattga acctaaaata ggtaatccta gttgcgattc aacatcttct
     5041 tccgtcttaa tacgcttatc taatagttct tttaagaaaa taatcaatat tgctaaaaca
     5101 ataccaacaa tgatgctgat cactaagttg acagagacta tcggagatac ttttacagca
     5161 ttatcatgcg ctgaggaaag tatcgtaaca ttatcaacac tcataatttt aggcatgtca
     5221 tgagcaaaaa ctttagatat tttattaaca attttgtcag attcagattt attcccagtt
     5281 gtaactgata cagtaataat ttgagagttt gtttgattgg ttacttttaa aaacgaattc
     5341 aactcagctg ttgaatactg gccatcaaac tctctagata ctttatctag aattcttgga
     5401 cttttgataa tttccgtata tgtattaaca gactgcaaac tactttgaac attttggaaa
     5461 gctaaatcac ttgaggactt tttcatgttc actaatattt gagtagaagc agtatatttg
     5521 tcaggcataa caaaaaaggt taatgccgca cttactacaa gacatattgc cggtaaaata
     5581 agcaataatt taatattctt ctttagaata tttaatagtt ttactaaatc aaacttttct
     5641 ttcatggttt cctccacata atcaatcatt gtattcatta tgtatgtttt ataaatcgga
     5701 caattgtatc tagtttaacg accacaaaac atacacaact acattttctc taattattta
     5761 tataaatatt ttatcgttta aaattatatc atgattcttg ggcattatgt ataacttatt
     5821 tatatttttg ctcaagatat aatattgtcc aactttaaat atccaaacct attaataata
     5881 aatctagata ccatcgtact ctatcatggc tttcttataa tcgagtagaa gcatcatcat
     5941 tacttaatta tttgctcttt acaacaccga gcgtgcccgt actcggtagt tcaatacctt
     6001 gcgtaatccg tcactgtgaa ttgggttaat gataataaag cccacacctt ttaaaaagat
     6061 gtgggtaatt tatataattt ttatttacat tttaaactt
//
LOCUS       DAKPJH010000137         5751 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.137, whole genome shotgun sequence.
ACCESSION   DAKPJH010000137 DAKPJH010000000
VERSION     DAKPJH010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5751
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.137"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            38..262
                     /locus_tag="OY092_002399"
     CDS             38..262
                     /locus_tag="OY092_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HCX1077318.1"
                     /translation="MIIMITNTFILGITGPTSLVVISIIALIIFGPKKLPQFGRAIGS
                     TLKEFKSATEDLDKESHDTPSKESKQQREQ"
     gene            279..980
                     /gene="tatC"
                     /locus_tag="OY092_002400"
     CDS             279..980
                     /gene="tatC"
                     /locus_tag="OY092_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006191819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HCX1077319.1"
                     /translation="MVHFSELRHRLVKILLSFVITVIVVYVSSFWWMTPFITYITRAH
                     VSLHAFSFTEMIQIYVMIIFFIAFCFISPVMFYQLWAFIAPGLHNNERQFIYKYSFFS
                     VLLFCAGVAFAFYVGFPMIIQFALKLSLTLNISPVIGFKAYLVELIRWLFSFGILFQL
                     PILFIGLAKFGLIDTTSLKHYRKYIYFACFVLASIIAPPDITLNILLTLPLILLFEFS
                     MFIVKFTCRGKPPTH"
     gene            complement(1073..2785)
                     /locus_tag="OY092_002401"
     CDS             complement(1073..2785)
                     /locus_tag="OY092_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000683714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HCX1077320.1"
                     /translation="MKHYLTKIIAMLITAAMVCSFGLLKSQAAAQQSISDVYSVITDA
                     KSVLSNNSISNDNKQKAIEQVVSAVKKLSLEDNSEGNAVKSDVRKLEDAKANDDQKDT
                     LSQLTKSLIAYEEKLASKDAGSKIKLLQQQVDAKDAAMTKAIKDKNKAELESLNNSLN
                     QIWTSNETVIRNYDANQYGQIEVALLQLRIAIHKSPLDTTKVSHAWTTFKSNIDHVDK
                     KSGTSANDQYHVSQLNDELEKAIKAIDDNQLSDADAALTHFIEIWPYVEGQIQTKDGA
                     LYTKIEDKIPYYQSVLDEHNKAHVKDGLVDLNNQIKEVVGHSYSFVDVMIIFLREGLE
                     VLLIVMTLTTMTRNVKDKKGTASVIGGAIAGLVLSIILAITFVETLGNSGILRESMEA
                     GLGIVAVILMFIVGVWMHKRSNAKRWNDMIKNMYANAISNGNLVLLATIGLISVLREG
                     VEVIIFYMGMIGELATKDFVIGIVLAIVILIVFALLFRFIVRLIPIFYIFRVLSIFIF
                     IMGFKMLGVSIQKLQLLGAMPRHVIEGFPTINWLGFYPSYEPLIAQAAYIMVVAILIF
                     KFKK"
     gene            complement(2766..3994)
                     /gene="efeB"
                     /locus_tag="OY092_002402"
                     /pseudo
     CDS             complement(2766..3994)
                     /gene="efeB"
                     /locus_tag="OY092_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
     gene            complement(3991..4845)
                     /locus_tag="OY092_002403"
     CDS             complement(3991..4845)
                     /locus_tag="OY092_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077321.1"
                     /translation="MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQA
                     TKAYDKYTDEQLNEFLKGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDL
                     DPKIDARLADMKEEKKEKEWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKA
                     DTLDITPKLMLQGSVDLLNEVATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPI
                     LEKKDKKLSDDIQMNFDKVNQLLDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPL
                     SKMAVITE"
     gene            complement(5110..5655)
                     /locus_tag="OY092_002404"
     CDS             complement(5110..5655)
                     /locus_tag="OY092_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077322.1"
                     /translation="MFGMKVNEQIRLKILEAHDTEALFNLINRSRNSLREWLPWVDAT
                     EQPSDTRAFIKRGLLQFADGHGFQCGIWYEGMLVGVIGLHEINHMHRKTSIGYYLDKQ
                     FEGHGIMTQAVEALIKYCFDEIDLNRIEISAAVHNEKSRAIPERLGFTREGMLRDNEL
                     LNGIYSSSYIYSLLKSEYNEG"
BASE COUNT         1717 a         1198 c          780 g         2056 t
ORIGIN      
        1 gtataaagta aatactatat actacttatg atcgaggttg attatcatga taactaacac
       61 ttttatttta ggcatcacag gcccgacaag tcttgtcgtc attagcatta tcgctttaat
      121 tatttttggt ccgaaaaaat taccacaatt tggtcgtgct atcggttcta ctttaaaaga
      181 atttaaatct gcaacagaag atttagataa agagtctcac gatacaccca gtaaggaatc
      241 gaagcaacag cgagagcaat agtactgatg atacattaat ggttcacttt agcgaactac
      301 gccatcggtt agtaaaaatt ttattgtcgt tcgtcattac ggtcatcgtc gtatatgttt
      361 catcattttg gtggatgaca ccattcataa cgtatattac ccgtgcacat gtgtccttac
      421 atgcattttc attcacagaa atgatccaaa tatacgtgat gattatattt ttcatcgcgt
      481 tttgtttcat ttcaccagtc atgttttatc aattgtgggc attcattgca cctggattac
      541 ataataatga acgtcaattt atttataaat atagtttttt cagcgtgtta ttattctgtg
      601 ctggcgtcgc ttttgcattt tatgttggct ttccaatgat cattcaattc gcgttaaaat
      661 tatcattaac tttaaacatt tcgcctgtca ttggctttaa agcgtattta gttgaactta
      721 tccgttggct tttcagtttt ggcattttat tccaattgcc aatattattc ataggacttg
      781 caaaattcgg tcttatagat accacatcat tgaagcatta tcgaaaatat atttatttcg
      841 cttgctttgt gctggcgagt atcattgcac caccagacat aacattaaat atattactca
      901 cattgccact catattgctc tttgagttca gtatgttcat cgttaaattc acatgccgag
      961 gcaaaccgcc aacacattaa tcttataaga attaatgctg tgattatcgt tatactgcaa
     1021 taccgagtat ttccaacatc gcaacaaaaa aaacaggcac tcggcctgtt ttttattttt
     1081 taaatttaaa gattaagata gcaactacca taatataagc agcttgtgct atcaatggtt
     1141 cataacttgg atagaagccc aaccagttaa tcgttgggaa tccttcaata acatgtcttg
     1201 gcatcgcacc taataattgt aacttttgaa tacttacgcc aagcattttg aatcccataa
     1261 taaaaataaa gatcgacaat accctaaata tatagaatat aggtatcaat ctgacgataa
     1321 atctaaataa tagcgcaaag acaattaata tcacgatggc caagacgata cctatgacaa
     1381 aatctttggt cgctaattcg cctatcattc ccatatagaa aatgataacc tcgacacctt
     1441 cacgcaacac agatattaaa ccaatcgtcg ctaacaatac caaattacca ttactaatcg
     1501 cattggcata catattttta atcatatcat tccagcgttt cgcatttgaa cgtttgtgca
     1561 tccaaacacc aacgataaac attaatatga ccgcaacaat acctaatccc gcttccatac
     1621 tttcacgaag aatgccacta ttacctaaag tttctacaaa cgtaattgct aagataatac
     1681 tcagtacaag tccggcaatt gcaccaccaa tcacacttgc agtacccttc ttatctttga
     1741 cattacgcgt catagtagtc aatgtcatta caattaataa cacttctaga ccttcacgta
     1801 aaaagataat catcacatca acaaagctat aactatggcc aacaacctct ttaatttggt
     1861 tatttaaatc tactaagcca tctttcacat gtgctttatt atgttcgtct aatacacttt
     1921 gatagtatgg tattttatct tcaattttcg tatacaaagc accgtcttta gtttgaattt
     1981 gaccttcaac atacggccaa atttctataa aatgtgtaag cgcagcatca gcatccgaca
     2041 attgattgtc gtcgatagct ttaatcgcct tctctaactc atcatttaat tgtgatacat
     2101 ggtattgatc atttgcagac gtaccacttt tcttatcgac atgatcaata tttgatttaa
     2161 aagttgtcca agcatgtgac acttttgtcg tatctaatgg cgacttatga attgcaattc
     2221 taagttgtaa taatgcgact tcaatttgtc catattgatt tgcgtcataa ttgcgaatca
     2281 ccgtttcatt acttgtccaa atctgattca aactattgtt cagcgattct agctctgctt
     2341 tatttttatc tttaatcgct tttgtcatcg ctgcatcttt ggcatcgact tgctgttgta
     2401 atagtttaat tttagaaccc gcatctttac tagccaattt ctcttcataa gcaattaatg
     2461 acttcgttaa ttgcgaaagt gtatcttttt gatcatcatt cgcttttgca tcttcaagct
     2521 ttctcacatc tgatttgaca gcattacctt cactattatc ttcaagcgat aatttcttaa
     2581 ctgcacttac cacttgctca attgctttct gcttattgtc attcgatatc gaattattag
     2641 aaagtacaga tttcgcatcc gtaatcacac tatatacatc actaatactt tgttgtgctg
     2701 ctgcctgact tttcagtaac ccaaagctac acaccatagc agcagttatt agcattgcta
     2761 taattttagt caaataatgt ttcaccgagg tatcctccct tactaacacc tggtaatact
     2821 aaaaatgaag cagaacctct atgtgtaatg tattcgttta atttatcatt actgcctaaa
     2881 ttattttgaa tatcgataaa ttgttgggtc gctttttgaa aagcaatgaa caacaagcct
     2941 gtctcgaagt tacctgtgcg gtcatccgta ccatcaacat aattaaaggc tctacgtaaa
     3001 attgacgtat tagcttcttt cgctagtctc gtatgagcat ctttatctat aatgtactca
     3061 ccgtgactat ctttcgcttt taagtcaatt tcatcaaact ctttcccgcc tgttaacggc
     3121 gcaccactat gtcgtttccg accaaatgtc gcctcttgtt cttctaatgc agtgcgatcc
     3181 cacgtttcaa tgtgtatttg gatacgtctg acaacacaat aagttccatg cttcgcccat
     3241 ccatcatcaa taaacacata atctttaagt tgattattct tcctaggatt aattgttcca
     3301 tctttaaatg ccattaaatt ccttggcgtt tccttacctt tagcagagat aaaaccagat
     3361 tgcgcccaac gcaccttaac aatatctcga aacggacgaa ctaaattatg aaccgcatga
     3421 aaagacactt gtgaatcatt tgagcatgct tgaatcataa tatcgccatc gctgtaatcg
     3481 tctattaact gatcattcgg aaaatgcggt aaatctttaa aggcatcggg aattttatta
     3541 gataacccaa ttttcttcat caaagactta ctaattccaa aggtaatcgt taacttgctt
     3601 gcacctaatc ctatcgattc accggtatct actggcggca ttaaaggatt gttactggcc
     3661 ttgccaactg catctccatc catcatacga tcagccataa ccgtccattt cttaaacatt
     3721 gctttaatcg catcccgatc ttttgatttc aaatctaatg caacgaattt acatgttttt
     3781 tgcgtcggtg tggtaatgcc tggttgcact ttaccataaa attatacgca tctttttccg
     3841 gatcttctgg tgtattgaac attgatttga aagaccacat gctaccaaca ccacttgcgc
     3901 caattgcaac accggcaccg ccaataccta acattttcaa aaatgtacgt cttgaaaatt
     3961 gcgtactatt gttaacttgt tcataatttg tcattcagta atcacagcca ttttacttag
     4021 tggctctcct aatgcattaa cagcatctgc aaatgcttta cggtctttct tagatacttt
     4081 ttcaaacgac tcataaccgc cgttgttatc tttatattta tccaataact gattcacttt
     4141 atcgaagttc atttgaatat catcacttaa ttttttatct tttttctcta aaataggttt
     4201 aaataagtca taaatttttt gtgcgccttc aacgttcgct ttaaaatcat ataaatctgt
     4261 atgtgaataa atttcttctt cacctgtgat tttagaagtt gcaacttcat ttaataggtc
     4321 aacagaacct tgtaacatta attttggtgt gatatctaat gtatcagctt tggcatgcaa
     4381 ttcttttgca tctttcaata attgttgtgc atctttttta gtcacatcat caattttctt
     4441 atcttcgtat aatgcttttt caatcttatg atatcctgac cattcttttt cctttttctc
     4501 ttctttcata tctgcaagac gtgcatcaat tttaggatct aaatctccaa atgcttctgc
     4561 aactggttca gagcgttcat aatacatacg aacttttgga tataacgctt ttgcttgggc
     4621 catatcatta ttttcaatcg ctttaacaaa tttttctgta ccttttaaaa attcatttaa
     4681 ctgttcatca gtatatttat catatgcttt tgttgcttgt tttaattctg ctttaacacc
     4741 atcatctttt ttcgatgtct ttgaatcatc cttcttacta tcgtcgttcc cacatgcagc
     4801 aattaataac gttgatgcta ataatagcgt tgttaacttt ttcattttga cacctcatta
     4861 tagaaattct attatcccca tagacatgcc ctcattcgta ctatctcata ctccctaaat
     4921 gccaagataa tacgtggctc ttaaaatgat gattttaagg catcctccca tgaacattat
     4981 ctacttgata ataattataa aaatcattat attgttataa aataatactg tcaacaacct
     5041 ttttagtttg aaaataaata aaagagtaat acttatatgt aagtcattac tcttttgtag
     5101 tctgatttat catccttcat tatattctga ttttaataaa ctatagatgt aactcgatga
     5161 ataaatacca tttagtaatt cattgtcacg taacatacct tctctagtaa atcctagcct
     5221 ttcaggaata gctcgacttt tttcattatg aactgcggca ctgatctcaa ttcgatttaa
     5281 gtcaatctca tcgaagcaat actttatcaa tgcctcaact gcttgtgtca taatcccatg
     5341 accctcaaat tgtttatcta aataataccc tattgaagtt tttctgtgca tgtgattaat
     5401 ttcatgcaaa ccgataacac caactagcat tccctcatac caaataccac actgaaatcc
     5461 atgaccatca gcaaattgca aaagtcctct tttaataaat gcacgcgtat ctgatggttg
     5521 ctcagttgca tctacccaag gtaaccattc cctaagtgaa tttcttgaac gattgattaa
     5581 attgaaaagc gcttctgtgt catgggcttc taaaattttt aatcttattt gttcattcac
     5641 tttcattcca aacataccat cacaccctca tttatttttc atataattct gtaaattatc
     5701 ataataataa catattaata ttacgccttg tatcttaaat ttgttgtcct t
//
LOCUS       DAKPJH010000138         5624 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.138, whole genome shotgun sequence.
ACCESSION   DAKPJH010000138 DAKPJH010000000
VERSION     DAKPJH010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5624
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.138"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..4982
                     /locus_tag="OY092_002405"
                     /pseudo
     CDS             1..4982
                     /locus_tag="OY092_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="GA module-containing protein"
     gene            complement(5041..5442)
                     /locus_tag="OY092_002406"
     CDS             complement(5041..5442)
                     /locus_tag="OY092_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HCX1077323.1"
                     /translation="MAKINFDAATKGNPGISTCAVVIKEDDQHYTYTHELGEMDNHTA
                     EWAACIYALKHARELNVSNALLYTDSKLIADSVNAGYVKNAKFKPYFDQLEIFEQDFD
                     LLFVKWIPREQNKEANQNAQQALYKLIKKNK"
BASE COUNT         2356 a          940 c          970 g         1358 t
ORIGIN      
        1 ctggtagcaa gtttattaat gaagataaac cgcaaaaaga tgcttaccaa gcagcagttc
       61 aaaatgcaaa agatttaatc aaccaaacag gtaatccaac actcgacaaa tcacaagtag
      121 aacaattaac acaagcagta acaactgcaa aagataatct acatggtgat caaaaactag
      181 ctcgtgatca acaacaagcg gtaacgactg ttaatgcatt accaaactta aatcatgcac
      241 aacaacaagc attaactgat gcaattaatg cagcgcctac aagaacagag gttgcacaac
      301 atgttcaaac tgctactgaa cttgatcacg cgatggaaac attgaaaaat aaagttgatc
      361 aagtgaaaac agataaggcc caaccaaatt acactgaagc atcgacggat aaaaaagaag
      421 cagtggatca agcgttacaa gctgcacaaa gcattacaga acctaataat ggttcaaatg
      481 caaataaaga tgctgtagaa caagcattaa ctaagcttca agaaaaagaa aatgagttaa
      541 atggtaatga gagagtcgct gaagctaaaa cacaagcgaa acaaacagtt gaccaattaa
      601 cacatttaaa tgctgatcaa attgcaactg caaaacaaaa cattgatcaa gcgatgaaac
      661 ttcaaccaat cgcttaatta gtagatcaag caacgcaatt gaacaaatct atggatcaat
      721 tacaacaagc ggtcaatgat catacaaacg ttgagcaaac tgtagattac acgcaagcag
      781 attcagataa gcaaaatgct tataaacaag ctattgcaga tgctgaaaat gtattaaaac
      841 aaaatgcgaa taaggaacaa gtggatcaag cacttcaaaa cattttaaat gcaaaacaag
      901 cattaaatgg tgatgaacgc gtagcacttg ctaaaacaaa tggtaaacat gatattgacc
      961 aattaaatac attaaacaat gcacaacaag atggatttaa aggcagaatt gatcaatcta
     1021 atgacttaaa tgagatcaaa caaattgtag atgaagctaa agctctaaat cgtgcaatga
     1081 atcaattgtc tcaagaaatc actggcaatg aaggacgtac gaaaggtagt acgaactatg
     1141 tcaatgcaga tacacaagtt aaacgcgtgt acgatgatgc agttgataaa gcgaaggaag
     1201 cactaaataa agcgacaggt caaaacttaa ctgcagaaga agttatcaag ttgaacgatg
     1261 cggtaacagc agcgaaacag gcattaaatg gtgaagaaag acttaacaag cgtaagtctg
     1321 aagcattaca aagattggat caattaacac atctaaacaa tgctcaaaga caattagcaa
     1381 cacaacaaat taataatgct gaaacattaa ataaagcgtc tcgagcaatt aatagagctg
     1441 ttcaattaga tgatgcaatg ggtgcagtac aacagtatat tgatgatcat cattttgatg
     1501 tcattagcag tacaaattac atcaatgcag acgataactt gaaagcaaat tatgataatg
     1561 ccattacaaa tgcagcgcat gagttagata aagttcaagg tagtgcaatc acgaaagctg
     1621 aggcagaaca attaaaacaa aatattatag atgcgcaaca agccttaaat ggtgatcaaa
     1681 atcttgcaac tgctaaagat aaagccaatg cctttgttga tacattaaat ggtttaaatc
     1741 aacaacaaca agatcttgca catcaagcaa ttaataatgc cgatactgta acaggtatag
     1801 cgaatattat taatgatcaa atcgacttga ataacgctat ggaaacattg aaacacttag
     1861 ttgacaatga aattccaact gcagaacaaa ctatcaatta ccaaaacgct gacgacgttg
     1921 ctaaatcaat ctttgatgat gcaaaacgtc tggcaaatac attgctaaat agtgataaca
     1981 caaatgtgaa tgatattaac ggcgcaattc aagcagtcaa tgatgcaatc caaaatctta
     2041 atggtgatca acgtctacaa gaagctaagg acaaagcaat tcaaaatgtt aacaaagtct
     2101 tagcagataa attgaaagaa atagaagctt caaatgcgac ggatcaagac aagcttattg
     2161 cgaaaaataa agcagaagaa ttggcaaaca gtatcattaa caacattaat aaagcaacaa
     2221 gtaatcagga tgtatctcaa gttcaaacag ctggcaacca tgcgattgaa caagtgcatg
     2281 ccaatgaaat accgaaagct aaaattgatg caaataaaga tgctgataag caagtacaag
     2341 cattaattga cgaaattgat cgaaatccaa atctaacaga taaggaaaaa caagcactta
     2401 aagatcgaat aaatcaaata ttgcaacaag gtcataacgg catcaacaat gcgatgacta
     2461 aagaagaaat tgaacaagcc aaagcacaac ttgcacaagc gttacaagaa attaaagatt
     2521 tagtgaaagc taaagaaaat gcgaaacaag atgtggataa gcaagttcaa gcattaattg
     2581 acgaaattga tcgaaatcca aatctaacag ataaggaaaa acaagcgctt aaagatcgaa
     2641 taaatcaaat attgcaacaa ggtcataacg gcatcaacaa tgcgatgact aaagaagaaa
     2701 ttgaacaagc caaagcacaa cttgcacaag cgttacaaga aattaaagat ttagtgaaag
     2761 ctaaagaaaa tgcgaaacaa gatgttgata agcaagtaca agcattaatt gacgaaattg
     2821 atcgaaatcc aaatctaaca gataaggaaa aacaagcgct taaagatcga attaatcaaa
     2881 tattgcaaca aggtcataat ggcattaaca atgcgatgac taaagaagaa attgaacaag
     2941 ccaaagcaca acttgcacaa gcattacaag aaattaaaga tttagtgaaa gctaaagaaa
     3001 atgcgaaaaa tgcaattaaa gcattagcaa atgcgaagcg tgatcaaatc aattcaaacc
     3061 ctgatttaac acctgagcaa aaagcaaaag cgctcaaaga aattgacgaa gctgaaaaac
     3121 gagcactaga aaatattgaa aatgctcaaa ctaaagatca attaaatcaa ggattaaatt
     3181 taggattaga tgatattaga aatactcatg tatgggaagt tgatacacaa cctgctgtaa
     3241 atgaaatttt tgacgcaact cctgaacaaa tccttgtaaa tggtgaactc attgtacatc
     3301 gtgatgacat cattacagaa caagatattc tagcacatat aaacttagtt gatcagctta
     3361 cagcagaagt tattgataca ccgtcaaccg caacaatttc tgatagctta acagcaaaag
     3421 tcgaagtaac attacttgat ggatcaaaag taattgttaa tgttcctgtg aaagtagtag
     3481 aaaaagaatt ggcagtagtc aaacaacagg caattgaatc aattgaaaat gcggcacaac
     3541 aaaagattaa tgatatcaat aatcacgcaa cattaacacc agaacaaaaa gaagctgcga
     3601 ttgcggaagt taataagctt aaacaacaag ctattgagca aattaacaat gcaacagatg
     3661 ttcattcggt ggaagaagtt caacaacaag aacaaacgca tattgaacaa tttaatccag
     3721 agcaatttac aattgaccaa gccaaatcaa atgccattaa atcaattact gatgctattc
     3781 aacatatgat tgatgaaatt aatgctagta aggatttaac tgataaagag aaacaagaag
     3841 ctatatctaa gttaaatcaa ttaaaagaac aggcaattca agcgattcaa cgtgcgcaaa
     3901 gtatcgatga aatcacacaa caattagagc aattcaaagc gcaaataaaa gcagcaaatc
     3961 catttgctaa agaattggaa aaacgtaaaa aagtagcgat ttcaaaaatt aaagatattt
     4021 cgacagatgc aattgaacgc attaaaaata gttcaactgg aactgctgaa gaaagacaag
     4081 cagcaatgaa tcgaattaac gaaattgtac ttgaaacaat cagagatatt aataatgcgc
     4141 aaacgccaca acaagttgag gctgcattga ataatggtat cgcacgaatt ttggcagtac
     4201 aaattgttac atctaataat agcaagcatt catcagattc ggacggtgaa tctaatagtc
     4261 atataagcat tggatatgga actgtaaacc atccattcaa tagttcggct attggacata
     4321 aaaagaaatt ggatcaagat gatgaaatcg atccacttca tatgcgtcat ttcggtgacc
     4381 gaattggtaa tgttatcaaa aacgcacttg gcgttgttgg tatttccgga ttacttgcta
     4441 gcttctggtt cttcattgcg aaacgtcgtc gtaaagagga tgaagaggaa gaattggaaa
     4501 ttagagataa tagcaaagac aagaagaaag gttcaataga aggtactaaa catttaccac
     4561 ttttattagc gaaacgtcgc agaaaagaag atgaagaaga tgctattgtt gaagaaaaag
     4621 attcgctaaa caataacgag tcactcgata aagttaaaca tacgccgttc ttcttaccta
     4681 aacgtcgtcg caaagaagat gaagaagatg tggaagttac aaatgaaaac acagatgaaa
     4741 aagtgttgca agataacgaa cattcaccac tcttaatcgc aaaacgacgc aaagataaag
     4801 aggtagatgt tgaaacaaca cctagtattg aatctaatga agatgacgca cctttattat
     4861 tggctaaaaa gaaaaatcaa aaagataacc aatccaaagg gaaaaagtcg gcatcaaaaa
     4921 aaccttctaa aaagctagta gctaaaaaga agaaaaagaa atctaaaaaa aataaaaaat
     4981 aatttgtttc ttcgataaaa agaggagcac cgattgaaat tatgtcagtc ggtgctcctt
     5041 ttatttgttc tttttaatta atttgtacaa tgcttgctgt gcgttttgat tcgcttcttt
     5101 gttttgttct ctcggaatcc atttaacaaa taataaatca aaatcttgtt caaatatttc
     5161 caattgatca aaataaggtt taaattttgc attttttaca taaccagcgt taacactatc
     5221 cgcaattaac ttagagtcag tgtacaacaa cgcattgcta acgtttaatt cacgggcgtg
     5281 tttcaatgca tagatacaag cagcccattc tgcagtgtga ttatccattt cgcctaactc
     5341 atgtgtatat gtataatgct gatcatcttc tttgattaca acggcacacg tacttatgcc
     5401 tggatttcct ttcgtcgcag catcaaaatt tattttcgcc ataataaacc tactttctat
     5461 tcaatactta gttaaagtta ctattactgt aatacaaaat atattaaaca atctattaaa
     5521 aaacacgcat cacttaaata agtaacacgt gtttaaaata cttgctgatt caaagatgat
     5581 tttctaatac gtagtactgt aatatacttc ctaaaaaaat catc
//
LOCUS       DAKPJH010000139         5524 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.139, whole genome shotgun sequence.
ACCESSION   DAKPJH010000139 DAKPJH010000000
VERSION     DAKPJH010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5524
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.139"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..123
                     /locus_tag="OY092_002407"
     CDS             <1..123
                     /locus_tag="OY092_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077324.1"
                     /translation="FVDCLTVNSHLYTLTNFEKLNHYLIIIFIAHAQHKKETCQ"
     gene            120..2546
                     /locus_tag="OY092_002408"
     CDS             120..2546
                     /locus_tag="OY092_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide lyase 8 family protein"
                     /protein_id="HCX1077325.1"
                     /translation="MTYRMKKWQKISTITLLMAGVITFNDSEFRSVDKHQIAVADTNV
                     QTTDYEKLRNTWLNVNYGYNQYDENNDAMKKKFEATEKEATNLLSSMKTESDRKYLWE
                     NSKDLDTKSADMTRTYRNIEKIAEAMKHKNTKLNTPDNKNKVKDALEWLHKNAYGKEP
                     TDKVKELTENFKNKTSRNTNLNWWDYEIGTPRALTNTLILLNGDISSDEKKKYTAPIK
                     TFAPESDKILSSVGQPEQAKGGNLVDIAKVKLLESIIEEDTTMMKESIDAFNKVFTYV
                     QSNATGKERNGFYKDGSYIDHQDVPYTGAYGVVLLEGISQMMPMIKETSFKDSNQNDT
                     TLKSWIDEGFMPLIYKGEMMDLSRGRAISRENETSHSVSATVMKSLLRLSDAMDDSTK
                     AKYKQIVKTSVKSDSSYKQNDYLSSYSDISKMKSLMEDSTISTNDLTQQLKIYNDMDR
                     VTYHNKGLDFAFGLSMTSKNVARYESINNENLKGWHTGAGMSYLYNSDVKHYRDNFWA
                     TADMKRLAGTTTIENEEPKGTDVKKSSKTFVGGTKFDDQHASIGMDFENQDKTLTAKK
                     SYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKTNGYTLYTDDKQTTASDNQDTNSVF
                     LESTNKPKNNIGYHFLNKSKITVKKESHTGKWSDINKSQKSEDKTDEYYEVTQKHSDK
                     DNKYGYVLYPGITKDNFKSKASQVTVVKQDDDFHVVKDNESVWAGVNYSDSAKTFEIN
                     GTKVEVKAKGMFILKKKNDKTYECSFYNPESTNPASDIESKISMTGYSITNKDTSTTN
                     ESGVRFELTK"
     gene            complement(2606..3460)
                     /locus_tag="OY092_002409"
     CDS             complement(2606..3460)
                     /locus_tag="OY092_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HCX1077326.1"
                     /translation="MNKTNFGDYLNKSKSRKIYKIFDQNLKREFSYWHFRKLFKSYTR
                     QSDVHELKVCTQNDGTMEQIWIDKANQFGVAVTWKDNSIIGFVMRPLINYDAIKNETT
                     LKYAVPTTDCYEVFWGGDNELYNYHYLYPHQRYAIDLVIKENHKTYKNKGKVNTDYFY
                     FGKDIIAPANGTVEKVANGVQDNSIGSTNESQFLGNYIVIKHAENEYSLIAHLQQYSI
                     IVNEGQNVKYGDIIGKVGNSGNSTEPHIHFQVMNDKNIEACTSLKIRFINNRELIKGD
                     VVCGLQGE"
     gene            4333..4611
                     /locus_tag="OY092_002410"
     CDS             4333..4611
                     /locus_tag="OY092_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077327.1"
                     /translation="MTLNEYNYNNELILKLNKIEVQKNNEKISEVFKDYEILKPKIVF
                     NGSNPYLALNHIIVAEIENYSSLETFSKIYVDEDYYYNYGELIIKCKK"
     gene            4621..>5524
                     /locus_tag="OY092_002411"
     CDS             4621..>5524
                     /locus_tag="OY092_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077328.1"
                     /translation="MTTYMLMYSIPEKAGGITSVMLNRSKLLAEKGYSCALLTLDDKN
                     YDPLRAKLTNSGRLHKQVKIVNLYEELKMLYDVENTEIENKNMQTFEKLNLLNQEGFY
                     IQKDEYEEKKYARYFKDNHYIMYKKWINGQLSHIDYFQNRKRFKRHVFQNKILRKEIT
                     FNDKNKMSEVKYLSNDGFCYLSYWYGDNENIVNIFYFDKNSKEVLNFKNNKAFHSYWL
                     DKNLTSNDVLILDGIGTYHKVENMQNNDIKKIFTIHTNHFMSPYSYGAEIKPEFRNML
                     LNLKKLDTLVVLTKEQKDDIIKQFG"
BASE COUNT         2100 a          846 c          831 g         1747 t
ORIGIN      
        1 tttgtggatt gtttgacagt aaacagtcat ttgtatacgt taacgaattt tgaaaaattg
       61 aatcattatt taatcataat attcattgcg cacgcgcaac acaaaaagga gacatgtcaa
      121 tgacatatag aatgaagaaa tggcaaaaaa tatctaccat tacgttatta atggctggtg
      181 tgattacttt taatgatagt gaattcagaa gtgttgataa acatcaaatc gctgtggctg
      241 atacgaatgt tcaaacgaca gattatgaaa agttgaggaa cacatggctg aacgttaact
      301 acggttataa tcagtatgat gagaataatg atgcaatgaa aaagaagttt gaggctacgg
      361 agaaagaggc gacgaattta ctaagtagca tgaaaactga aagtgatagg aaatacttgt
      421 gggaaaactc aaaagattta gatacgaagt ctgcggatat gactcgtacc tatcgtaata
      481 ttgagaaaat cgcagaagcg atgaagcata aaaatactaa gttgaatact ccggataata
      541 aaaacaaagt taaagatgcc cttgagtggc tgcataaaaa tgcatatgga aaagaaccga
      601 ctgataaagt aaaagaactg actgagaatt ttaaaaataa aacttctaga aataccaact
      661 taaattggtg ggattatgaa attggaacac ctagagcatt aacaaataca ctaatattac
      721 tgaatggtga tatttcaagt gatgaaaaga aaaaatacac tgcccctatc aaaactttcg
      781 ccccagaaag tgacaaaata ttatcatcag taggacaacc tgaacaagct aaagggggaa
      841 atttagtaga cattgctaaa gtaaaacttt tagaaagtat tatcgaagaa gatacaacta
      901 tgatgaaaga atcaatagat gcatttaata aagtcttcac ttacgttcaa agtaatgcaa
      961 ctggtaaaga acgtaatgga ttctataaag acggctctta tattgatcat caagacgtcc
     1021 catacactgg tgcttatggc gttgtactct tagagggtat ttctcaaatg atgccgatga
     1081 taaaagaaac atcttttaaa gatagtaatc aaaatgatac aacattaaag tcgtggattg
     1141 atgaaggatt tatgccactc atttataaag gtgaaatgat ggatttatca cgtggtagag
     1201 ccattagccg tgaaaatgaa acgagtcact cagtatctgc aactgtaatg aaatcattgt
     1261 tgagattaag tgatgccatg gatgattcaa caaaagctaa atataaacaa atcgttaaaa
     1321 cttcagttaa atctgattca agttataaac aaaacgatta tttaagctct tattcggata
     1381 taagcaaaat gaagtcttta atggaagaca gcactatttc tactaacgat ttaacacaac
     1441 aacttaaaat atataatgac atggatcgtg tcacctatca caataaaggc ttagactttg
     1501 catttggttt aagtatgacg tcgaaaaacg tcgcacgtta cgaaagtatc aataatgaaa
     1561 acctaaaagg ttggcatact ggtgctggaa tgtcttattt atacaatagc gatgtgaaac
     1621 actaccgtga taacttctgg gcgactgccg atatgaaacg tttagcaggt actacaacta
     1681 tagaaaatga agaacctaaa ggtacggatg ttaaaaagtc gagtaaaact tttgtaggcg
     1741 gaacaaaatt cgatgaccaa catgctagta tcggaatgga ttttgaaaat caggacaaaa
     1801 ctttaactgc caaaaaatca tatttcatat taaacgataa aattgtcttc ttaggaactg
     1861 gcattaaaag tactgattca tcaaagaatc cagttacaac gattgaaaat cgcaaaacga
     1921 atgggtatac gttatataca gacgataaac aaacaaccgc ttccgataat caggatacca
     1981 attccgtctt tttagagtcc accaataaac ctaaaaacaa tataggctat cattttttaa
     2041 acaaatcgaa aataactgta aaaaaagaaa gtcatactgg taagtggagt gatataaata
     2101 aaagtcaaaa atcagaagac aaaactgatg agtattatga agtaactcaa aagcattctg
     2161 ataaagacaa taaatatgga tatgtgttgt atccaggtat aacaaaagat aattttaaat
     2221 ccaaagcaag ccaagtaact gtcgttaaac aagatgatga cttccacgtt gtgaaagata
     2281 atgaatcggt ttgggctggt gtcaattata gtgatagcgc taaaactttt gaaattaatg
     2341 gtactaaagt cgaagttaaa gccaaaggaa tgtttattct taaaaagaaa aatgataaaa
     2401 cttatgaatg tagcttctat aatcccgaat ctacaaatcc cgcttcagat attgaatcta
     2461 aaatttcaat gactggatac tctattacaa acaaagatac atcgactaca aatgaatccg
     2521 gcgtacgctt tgaattaact aaataagcaa gaaaatctcg gcactatacc atttttatag
     2581 tgtcgagatt ttataaatat cgccatcatt caccttgtaa tccgcagacc acatcaccct
     2641 tgataagttc tcgattattt ataaatcgaa ttttcaaaga tgtacatgct tcaatattct
     2701 tatcattcat tacttgaaaa tgtatatgag gttcagtaga attgccagaa ttcccaacct
     2761 tcccaatgat gtcaccatat ttaacatttt gcccctcatt cacaatgatt gaatattgtt
     2821 gtaaatgagc tattaggcta tactcatttt ctgcgtgctt gattacaata taatttccta
     2881 aaaactgtga ttcattcgtg cttccaatac tgttgtcttg aaccccattc gctacttttt
     2941 caactgtacc atttgctggc gcaatgatat cttttccaaa ataaaaataa tcagtattta
     3001 cttttccttt gttcttatat gttttatgat tttctttaat aactaaatca atagcatacc
     3061 tttgatgtgg gtataaatag tgataattat ataattcatt atctccaccc caaaaaacct
     3121 catagcaatc tgttgtcggc actgcgtatt ttaaagtcgt ttcattctta atagcatcat
     3181 aattgattaa cggacgcata acaaatccaa taatactatt atctttccaa gtcactgcca
     3241 ctccaaattg atttgcttta tctatccata tttgctccat agtaccatca ttttgagtac
     3301 acacttttaa ctcatgtaca tcagactgcc ttgtataaga tttgaaaagt ttcctaaagt
     3361 gccaataact aaactctcgc ttcaaatttt gatcaaaaat cttatatatt ttcctgctct
     3421 tacttttatt taaataatcc ccaaagtttg ttttattcat atattcttaa cctcttatgt
     3481 ttattttggt atcaattctt tctccagttc ctgcgtcatt tttacgctac cttatatttt
     3541 ttgcttcccc tggaaatttt atgaatttgc ttttttacat ttctcgtcga atatgttgga
     3601 atgaataatc acgttttttt acatcatcct atccgctttc aaagacacaa aatacctcac
     3661 acatatacgt tgcctgaatc ttgtggaagt ttttgtctat gaaatcaaaa ttgcttttta
     3721 ttctttatta aagatgtgca taaccttttt ttattatatg ttcttctaaa actttaagtc
     3781 tttttgatag attcacatca ttttccaatt atctgcaaaa gcatttcctc tatttttata
     3841 acatttagtt aaccactttg atattttttg aataggaatt caaagacgca ttaagacatc
     3901 agtaacattt atacttgata caacgagttg tattacttct attttaaagt atattcacat
     3961 ttttctctta gtcataacgg tcagtcctac aatttgaaat ttttattgca acttagtcac
     4021 tgtcaattcg ctgtgttcga taatcagttt accatcaata agtatttcaa actaaaaatt
     4081 tttaaataga aagaatctag ttcctcataa tatcctgtca atacttcatt acattattta
     4141 tctttagtag cttttacagc atatcagctg aaaagttcca acaacattga caaccaacct
     4201 aataaataag aaaatataat tgtacataac ctaaaacgct ataaataata aaatgatatt
     4261 atctatttac ttagataaat agatgggcat cgaataaaat tttaatgatg gagaaaacag
     4321 ggatttatca acatgacatt aaatgagtat aattacaaca atgaattaat attaaagtta
     4381 aacaagattg aagtacaaaa aaataacgaa aaaatttctg aggtttttaa ggattatgaa
     4441 atattaaagc ccaaaattgt ttttaatggc tctaatcctt atttagcatt aaatcatatt
     4501 atagttgctg aaatagaaaa ttacagttct ttagaaacgt tctccaaaat atatgtagat
     4561 gaagattact actataatta cggagaatta attatcaagt gcaagaaata ggaggaaatt
     4621 atgactactt atatgttaat gtattcaata ccagaaaaag caggtggtat aacatcagtt
     4681 atgttaaata gatctaaact tttagctgaa aaaggctatt catgtgcctt attaactttg
     4741 gatgacaaaa actatgatcc attaagagct aagctaacaa attcaggacg gttacataaa
     4801 caagtaaaaa ttgttaactt atacgaagaa ttgaagatgc tgtatgatgt tgaaaataca
     4861 gaaatcgaaa ataaaaatat gcaaacattt gaaaaattaa atcttttaaa tcaagaaggc
     4921 ttttatattc aaaaagacga atatgaagaa aaaaaatatg ctagatactt taaagataac
     4981 cattacataa tgtataaaaa atggataaat ggtcaattat cacacattga ttattttcaa
     5041 aatcgaaaac gctttaaaag acatgttttt caaaataaaa tacttcgaaa agaaataact
     5101 ttcaacgata aaaataaaat gagtgaagtt aaatatttat caaatgacgg cttttgttac
     5161 ttatcatatt ggtatgggga taacgaaaat atagtcaata tattttattt tgataaaaac
     5221 agcaaagaag tattaaactt taaaaataat aaagcgttcc attcatattg gttggataaa
     5281 aacttaactt caaacgacgt attaatacta gacggtatag gtacttatca taaagtagag
     5341 aacatgcaga ataatgatat caaaaaaata tttactatac atacgaatca tttcatgtcc
     5401 ccttactcct atggcgctga gattaaacca gagttcagaa acatgttact aaaccttaaa
     5461 aagttagata ctttagttgt attaactaaa gaacaaaaag atgacattat aaaacaattt
     5521 ggtg
//
LOCUS       DAKPJH010000140         5502 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.140, whole genome shotgun sequence.
ACCESSION   DAKPJH010000140 DAKPJH010000000
VERSION     DAKPJH010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.140"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..646
                     /locus_tag="OY092_002412"
     CDS             <1..646
                     /locus_tag="OY092_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HCX1077329.1"
                     /translation="LGYFLPIGIDKVKSLSYSQFFFSSYTVATQLGFLLFSFVIAYFI
                     NKEYSNKNILFYKLIGDNIFTFFYKKVAVLFFECLVFIILSITIISIIYSDFSHYLLL
                     IILFSLVILQYILVVGTISMVSPNILISLGISIVYWIGSVILVAINKNIFGIVAPFEA
                     SNTMYRAVEKILNNESTFICPTEIINTVSFFVLLFIVNTIVLLLSRKRWLKIGM"
     gene            complement(808..1428)
                     /gene="srtA"
                     /locus_tag="OY092_002413"
     CDS             complement(808..1428)
                     /gene="srtA"
                     /locus_tag="OY092_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase SrtA"
                     /protein_id="HCX1077330.1"
                     /translation="MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQ
                     YDKNVKEQASKDKKQQAKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVS
                     FAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRD
                     VKPTDVEVLDEQKGKDKQLTLITCDDYNEKTGVWETRKIFVATEVK"
     gene            1622..2113
                     /locus_tag="OY092_002414"
     CDS             1622..2113
                     /locus_tag="OY092_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCX1077331.1"
                     /translation="MIRCAKKEDLNAILVIYNDAIINTTAVYTYEPQTIDERVAWFET
                     KQRKHEPIFVFEENGSVLGFATFGSFRPWPAYLYTIEHSIYVDASARGKGIASQLLHH
                     LIVEAKAKGYRALVAGIDASNKASIQLHQKFAFKHAGTLTNVGFKFNQWLDLAFYELD
                     LQD"
     gene            complement(2262..2432)
                     /locus_tag="OY092_002415"
     CDS             complement(2262..2432)
                     /locus_tag="OY092_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077332.1"
                     /translation="MLRLSIIFIAFIINTTITYGYTTEGTWVNLLFKSLSLSMIIVFM
                     FYYIRFVIEKKR"
     gene            complement(2494..2592)
                     /locus_tag="OY092_002416"
     CDS             complement(2494..2592)
                     /locus_tag="OY092_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077333.1"
                     /translation="MIKKKHLSGSLVPDRCFLIISEEVEKFMGNTC"
     gene            complement(2611..3510)
                     /gene="sdaAA"
                     /locus_tag="OY092_002417"
     CDS             complement(2611..3510)
                     /gene="sdaAA"
                     /locus_tag="OY092_002417"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HCX1077334.1"
                     /translation="MFDSIRETIDYAVENNISFADIMVKEEMELSGKSRDEVRAQMKQ
                     NLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATN
                     EVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
                     VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVE
                     IPCVMRNAIGSGNALISADLALAGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLA
                     GTPTGEAIKRKIFGTAEDMVKNN"
     gene            complement(3524..4204)
                     /gene="sdaAB"
                     /locus_tag="OY092_002418"
     CDS             complement(3524..4204)
                     /gene="sdaAB"
                     /locus_tag="OY092_002418"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HCX1077335.1"
                     /translation="MAKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNSARAILGDIP
                     KNIEIHYYESFAQTHQGHGTDVAIVGGAMGYSTFDNRIKSSLEIAADDGIKIDIIEEE
                     GDSIGQHPNCAYIKSSRNDGRYIEIIGISIGGGTIKIKGIHINGLEVDLNHGLPILVV
                     DGNMTKAQVNHFINDINDMKLDCKDEFIKIDEDKCLVVIPLNKAISESTLNTIKEKYS
                     DVNVSYIN"
     gene            complement(4207..5250)
                     /locus_tag="OY092_002419"
     CDS             complement(4207..5250)
                     /locus_tag="OY092_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HCX1077336.1"
                     /translation="MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLP
                     QAFLSYAIGGVFDIKFLQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFK
                     LLPAFIAAYGVAFLIKWIEKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIG
                     SAVTAVGDNNPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSF
                     VNLILFRKLNIGGPSKAFAVCIEPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGL
                     VIGVKGMATPIAGAIVLFGFNNAVTSIVTIATVIIVSIVLAYIIGTLINKFNLMNINF
                     KMPSKKNHIKESV"
BASE COUNT         1681 a         1062 c          823 g         1936 t
ORIGIN      
        1 acttgggtat tttttaccaa taggaataga caaagttaaa agtttaagct atagccagtt
       61 tttcttcagt tcatatactg ttgcaacgca attagggttc ttactatttt catttgttat
      121 tgcatatttt attaataaag agtattcgaa taaaaatata ttattttaca agctgattgg
      181 cgataatatc tttaccttct tctataaaaa ggtagcagtg ttattttttg aatgtttagt
      241 gttcataatt ctaagtatca ctattatttc aattatatat tcggatttct cacattactt
      301 actattaata atcttatttt cactcgttat cttacaatat atcttagttg ttggaacaat
      361 tagtatggtt tcacctaaca ttttaatcag cttaggtatc agtattgtat attggattgg
      421 ttcagtcatc ttagttgcca ttaataaaaa tatatttggt atcgttgctc catttgaggc
      481 gagcaacacg atgtatcgtg ccgtagaaaa aatattgaat aacgagtcaa catttatatg
      541 tcctactgaa attataaata cagtatcatt cttcgttctt ctatttatag ttaatactat
      601 tgtcttatta ctaagtagaa agagatggtt gaaaatcggt atgtagtaca taaaaaggag
      661 cggcatccat tgtcgctcct ttttattatg tatttttaca atctccacca atgacacgtc
      721 gtcattgtta cctcagacca aacaaaaaaa cagtctcgca atcaagactg ttttccactc
      781 aatatattca tccattagcg taatggatta tttaacttct gtagctacaa agattttacg
      841 tgtttcccaa acgcctgtct tttcattgta atcatcacaa gtaattaatg ttaattgttt
      901 atctttacct ttttgttcat ctagaacttc tacatctgta ggcttaacat ctcttatact
      961 tgtcatttta tacttacgtg tttcattacc aactttaaag tacaccatac tacctttttt
     1021 ggctgcttta agatttgtaa attgatagtt cggacggtca atgaaagtgt gccctgcaat
     1081 tgaaatattt tgatcatcta gtgattcgtt ttcttctgca aagcttacac ctctatttaa
     1141 ttgttcaggt gttgctggtc ctggatatac tggttcttta atatcagcat ctggaatttc
     1201 aatatagcct gccactttcg atttatcttt cggaatctga ggtttagctt gctgcttttt
     1261 atccttactc gcctgttctt ttacattttt atcatattgt tcaatctttt catctttatc
     1321 tttatcgtga agataattat cgatatgtgg tttagcaaac aaatatgctg ccactaggat
     1381 aagtaccaca ccagcgattg tcattaatcg atttgtccat tttttcatac gttaaggctc
     1441 cttttataca tttcacaatg cctattaaca tttcatatag tataccatta atttcaaagt
     1501 gactcatagc aattcatttt atactataaa atttacatgt atgcttttac gttagatttc
     1561 attacacata tttgcattca aataacgaaa cgcttttaat aattactaag ggggaattgt
     1621 tatgattaga tgcgctaaaa aagaggattt aaacgctata ttagtgatat acaatgatgc
     1681 cattatcaat actacagctg tttatactta tgaaccacaa accatagacg aacgtgtcgc
     1741 atggtttgaa acgaaacaac gtaagcatga gcctatcttt gtatttgagg aaaatggaag
     1801 tgtcttaggg tttgcgacgt tcggttcgtt tagaccttgg ccagcatacc tatatacaat
     1861 cgaacattct atttatgtcg atgcttcagc tagaggaaaa ggtattgcta gtcaattact
     1921 acaccattta attgtggaag caaaagctaa aggttatcgt gcgctagttg caggcattga
     1981 tgcttccaac aaagcgagta ttcagttgca tcaaaagttt gcttttaagc atgccggcac
     2041 actgaccaat gtaggtttta aatttaatca atggttagat ttagcatttt acgaattaga
     2101 tttacaagac tagtaatgtt tgaatcacat aatataaaca agacgaccat gtcaattcac
     2161 ttaacataac aagccaacat ataaaatttt aaacttctca gggacaattt acatcgtccc
     2221 ttttattttt tcttttcaaa tactatcccc atagctttga tttaacgctt tttctcaata
     2281 acaaaacgaa tatagtagaa catgaaaacg ataatcatgc tgagcgataa agatttaaat
     2341 aatagattga cccacgttcc ctcagtcgta tatccatatg taatcgttgt gttaatgatg
     2401 aatgctataa agatgattga tagtcttagc atatcatcac tccttttaag ttattttaga
     2461 tatacggggg cgcttttgca atcactattt tgattagcat gtatttccca taaatttttc
     2521 aacttcttca gagataatta agaagcatct atctggtact aatgatccag acagatgctt
     2581 cttttttatc aatatcttat tgttatctca ttaattattt ttaaccatat cttcagctgt
     2641 gccaaagatt ttacgtttaa ttgcttcgcc agttggtgtg cctgctagtc cacccaatcc
     2701 agtttcacgt aatgatgcag gaaggttacg accaacctta tccattgctt caataacttc
     2761 atcaacaggt attctacttt caatacctgc taatgctaaa tctgctgaaa ttaaagcgtt
     2821 acccgaacca attgcatttc tcataacaca aggaatttca acaagtccgg ctactgggtc
     2881 acaaactaat cctaataaat tgcttatcgc taatgccata gcgtgcccgg atgcttctgg
     2941 tgatcctccg aatatagcta ctgctgcagc tgccgccatt gcagatgctg aaccaacttc
     3001 agcttggcag ccacctgttg caccagctac acttgcattg tttgctacga cacgcccaaa
     3061 caacgctgaa gtgaataaga aatcaatcat ttgctcttct gttaaatcat gtgttttttc
     3121 taatttaaaa agtgcaccgg gaatggtacc cgaggaacca gctgttggcg ttgcacaaat
     3181 aatacccatc gcagcattga cttcatttgt tgcaatggca cctttgactg cgtcaatcat
     3241 ttcatatcca gacaaagcat gatgtgtttc attataatca cgtagtttag cagcgtcatg
     3301 accagtgtag cccgttacac tttcaacgcc atcacctgtc gtccctttga ttactgcgtc
     3361 tcgcatgaca tctaaatttt gtttcatttg cgctcgcact tcatcacgtg atttaccgct
     3421 taattccatt tcttctttaa ccatgatatc cgcaaatgat atattatttt ctacggcata
     3481 atctatagtc tctctaattg aatcaaacat gtttattccc cctctaattt atataggaaa
     3541 cgtttacgtc actgtatttc tctttaattg tatttaatgt cgattctgag attgctttat
     3601 ttaatggtat tacaaccaag catttatctt catctatctt aataaattca tctttacagt
     3661 ctaatttcat atcgttgata tcattaatga aatgatttac ttgtgcttta gtcatatttc
     3721 cgtcgacaac taaaattggt aatccatgat ttaaatctac ttctagtcca tttatatgaa
     3781 tacctttaat tttaattgta ccaccaccga ttgaaatacc gataatttca atgtagcgac
     3841 catcattacg agatgattta atataagcac agtttggatg ttgaccaata ctatcgcctt
     3901 cttcttcgat gatatctatt ttaataccat catcagctgc aatttctaat gaagatttaa
     3961 ttcggttatc aaatgttgaa tatcccattg ctccacccac aatagcgaca tctgtaccat
     4021 gtccttggtg tgtttgagca aatgattcat aataatgtat ttcaatattt ttaggaatat
     4081 ctcccaatat tgcgcgtgct gaattcccaa tctttactgc accagccgta tgagaacttg
     4141 aagggcccat cataactggt ccgataatat cgaaagcact ttgataatca tagctctttg
     4201 ccataattaa acactctcct taatatgatt ctttttgctc ggcattttaa agttgatatt
     4261 cattaaatta aacttattaa ttagtgttcc aataatatag gctaagacaa tgctgacaat
     4321 aatcactgtt gcgattgtta caattgatgt cactgcatta ttaaagccaa acaatacgat
     4381 ggcgcctgca attggtgttg ccataccttt gacacctatt actagtccgc taaatgtcac
     4441 gatacatgcg ttgacgaccc caatcagtgc atttgtacca tatagttgta ctggatattg
     4501 cgctattaaa tcaatttgcg tcaatggctc aatacaaact gcaaatgctt ttgacggtcc
     4561 accaatgttt aattttcgga ataaaataag gttaacaaat gagctacctg tacatgttag
     4621 tgctccaata gccataggaa cacctgtcag tcctaataaa cttgttaata ccattgaact
     4681 tagcggtgtc atacctgtaa caggaatcac tagtcctaaa atgaccgcta atgcatatgg
     4741 attgttatca cctaccgcag tgacagcact acctatttgt tttaatgttg ctagcacacc
     4801 aggtgtaatg attgatgcaa gtccgaaagc aattgctggt gcaaataaga tcaccacaat
     4861 taagtccaag ccttctggaa ctttcttttc aatccattta attaaaaaag ctacgccata
     4921 agctgcgata aatgctggta ataatttaaa gtcatgtaat actaaaccaa caatgaccgc
     4981 aaatactggt gcaacgccta agtttaagca cgttaaaata cctactgcaa taccgcttaa
     5041 acttcctgct aaatccccaa tatcttgtag aaatttaata tcaaatacgc caccaatagc
     5101 ataacttaag aatgcttgtg gtagaaatgt cgcacaagct gcaccggata atgcttgtag
     5161 tccttgttta ccgtacggtg catactttaa aaatagcgtc atgatcacta aaaccaagac
     5221 taatgtgcct acacctaaca gaatatccat ttcccaaaaa cctctctcta tgtttatttt
     5281 attttcagac cataaacatc gtacaccctt aagaaaacgt tttcaacttt tatctgttat
     5341 caaatcaaat atttaagtga aatatttcat atttgtgaaa gatttttaaa atggattgtt
     5401 tcaaaaacta cttatgttgt cattaatatt tactaattaa cttttcactc tatatttcaa
     5461 acagttgtgt gaaagttttt tgataacttt tttacatctg aa
//
LOCUS       DAKPJH010000141         5447 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.141, whole genome shotgun sequence.
ACCESSION   DAKPJH010000141 DAKPJH010000000
VERSION     DAKPJH010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.141"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            170..856
                     /locus_tag="OY092_002420"
     CDS             170..856
                     /locus_tag="OY092_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HCX1077337.1"
                     /translation="MDKYQLKARPVVIRRELLDHYSDLGLDEQDLVILLKLIYASETS
                     NKQPSIELLQKGSTMQPRDITMVIQNLIQRELLELQVQKDEEGRFTEYMNLDPFFEKL
                     SHILKQQSMETKEQNSKEKFKQLFRVLEDTFARPLSPYEIETLNQWIDVDKHDTAIIQ
                     AALDEANSLNKLSFKYMDRILLNWKKNNVKTIDDSRKIREKFNKPKMTHTVKTVPKFD
                     WLNGENLDGK"
     gene            846..1505
                     /gene="nth"
                     /locus_tag="OY092_002421"
     CDS             846..1505
                     /gene="nth"
                     /locus_tag="OY092_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HCX1077338.1"
                     /translation="MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCT
                     DVLVNRVTTELFKKYKTPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFN
                     GEIPQTHKELESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQ
                     VEDRLCSVIPRDRWNRSHHQLIFFGRYHCLARKPKCDICPLLEDCREGQKRYKASLKE
                     A"
     gene            1510..1851
                     /locus_tag="OY092_002422"
     CDS             1510..1851
                     /locus_tag="OY092_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077339.1"
                     /translation="MTNITKEVFDNLEQEIDVFAKNKTLGSSEAKPYLDEYHSKIIDY
                     FKQVNDITGNIDFDNLNQYPVVPMNFKERYDYMIERKYHFMGYRQMKTFKTELIKMNA
                     SYQTRLKNKQV"
     gene            complement(2369..4552)
                     /locus_tag="OY092_002423"
     CDS             complement(2369..4552)
                     /locus_tag="OY092_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HCX1077340.1"
                     /translation="MTENKGSSQPKKNGNNGGKSNSKKNRNVKRTIIKIIGFMIIAFF
                     VVLLLGILLFAYYAWKAPAFTEAKLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDV
                     PKSMKDAVLATEDNRFYEHGALDYKRLFGAIGKNLTGGFGSEGASTLTQQVVKDAFLS
                     QHKSIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKD
                     LNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKKIDL
                     KANLVNRTAEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTN
                     MDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATD
                     PHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDVKSHGTVSIYDA
                     LRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQL
                     ASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKP
                     YGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTMSVWMGF
                     SKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQ
                     DNNTTNRSAHGGSDTSANSSGTAQSNNNTRSQQSRNSGGLTGIFN"
     gene            complement(4549..5226)
                     /gene="recU"
                     /locus_tag="OY092_002424"
     CDS             complement(4549..5226)
                     /gene="recU"
                     /locus_tag="OY092_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HCX1077341.1"
                     /translation="MLCIINNVYYQTCVVKFMNYPNGKPYRKNSAIDGGKKTAAFSNI
                     EYGGRGMSLEKDIEHSNAFYLKSDIAVIHKKPTPVQIVNVNYPKRSKAVINEAYFRTP
                     STTDYNGVYQGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKNAYQQKGIVFLMIRFKT
                     LDEVYLLPYSKFEIFWKRYKDNIKKSITVDEIRKNGYHIPYQYQPRLDYLKAVDKLIL
                     DESEDRV"
BASE COUNT         1830 a          844 c          907 g         1866 t
ORIGIN      
        1 atagttcatc tgattatcca taaagttcat tgttaaaatc tagttttaaa aaatactgtt
       61 atttaaaatt tgtttgctac tagttaaata tattaagcat tttagtcgaa aattaaagaa
      121 aatgatttat actattaagt aatggttaaa tttaaaaggg ggcacgaaca tggataaata
      181 tcaattaaaa gcaagacctg tagtgatacg aagagaatta ttagaccatt acagtgactt
      241 aggtttagat gagcaagatt tagtcatttt gcttaaattg atttatgctt ccgaaacatc
      301 aaataaacag ccttcaattg aattacttca gaagggctca actatgcaac cacgtgatat
      361 tacaatggtt attcaaaatt tgatacaacg tgaattgcta gaattacaag ttcaaaaaga
      421 tgaagaaggt agatttaccg aatatatgaa tctagatcct tttttcgaaa aattaagtca
      481 tatattgaag caacaaagta tggaaacgaa agagcaaaat agtaaagaaa aatttaaaca
      541 attatttaga gttttagagg atacatttgc aaggccgtta tctccatatg aaatagaaac
      601 gttaaatcaa tggattgatg ttgataaaca cgatactgca attatacaag cggcattaga
      661 cgaggcgaat agtttgaata aacttagctt taaatatatg gatcgtattt tacttaattg
      721 gaagaaaaac aatgttaaaa caattgacga ttctagaaaa ataagagaaa aattcaataa
      781 accgaaaatg acgcacacag ttaaaacggt acctaaattt gattggttaa acggggagaa
      841 ccttgatggt aagtaagaaa aaagcattag aaatgattga tgttatagca aatatgtttc
      901 cggatgcaga atgtgaatta aaacatgata atccgttcga attaactatt gctgtattat
      961 tgtcagcgca atgtacagac gttctagtaa atagagtaac aactgagctg tttaaaaaat
     1021 acaaaacgcc tgaagattat ttggcagtca gtgatgaaga acttatgaat gatattcgtt
     1081 ctatcggtct gtatcgtaac aaagctaaga atattaagaa actttgtcaa tctttgattg
     1141 atcaatttaa tggagaaata ccacaaacac ataaggaatt agaaagttta gcaggtgtag
     1201 gacgtaaaac tgctaatgta gtcatgagtg tagcatttga tgaaccttcg ttagctgttg
     1261 atacgcatgt agaacgtgtt tctaaacgct taggtattaa tcgttggaaa gataatgtga
     1321 gacaggtaga agaccgttta tgttctgtca tacctagaga tagatggaat aggagccatc
     1381 atcaactcat tttctttgga agataccact gtttagcccg aaaacctaaa tgcgatattt
     1441 gtccactatt agaagattgt agagaaggac aaaaacgtta taaagctagt ttgaaagaag
     1501 cgtgataata tgacaaatat tacaaaagag gtatttgata atttagaaca agagattgat
     1561 gtatttgcca aaaataagac attaggttct agtgaagcaa aaccttactt ggatgaatac
     1621 catagtaaaa ttattgatta ttttaagcag gttaatgaca tcactggcaa tattgatttt
     1681 gataatttaa atcaatatcc tgttgtgcca atgaatttta aagaaagata tgattatatg
     1741 attgaacgta aatatcattt tatgggctat cgacaaatga agacctttaa aactgaattg
     1801 attaaaatga atgctagtta tcaaacaagg ttaaagaata agcaggtata gacaagtttg
     1861 atcattttct aatgttaaaa agatataaga ctaattcatg cacacatatt tgtatttatg
     1921 ttagatgtcg tgtcattaca acgtcttaat ataaaaactg tccatctaca tcataatgga
     1981 tatcttgagg tatgctttaa gatatctatt tcgaatcgta ggtggatttc ttatatctat
     2041 gattgtgaaa atatgttgca aacatgttga tatttcactg attaacgtac tcagggaatt
     2101 gataaacata tcaatttaaa ataacgtcta agatgattat gagaaaatat aatcataatt
     2161 ttaaaaatgg gaacaaccac ttattgaaat tcaataattt tacatagcta aagatgtgaa
     2221 tatgaaagac tatttagatg tttcaaaatg tatgtgaatg tctgatttta cggtttctac
     2281 taatatagca atagcgtatg aatacttata aaaaaatcct cagctacacc ataaatatgg
     2341 tataactgag gattttatgt tgagtggatt agttgaatat acctgttaat ccaccgctgt
     2401 ttctagattg ttgagatcta gtattgttat ttgattgtgc agtaccactg ctgtttgctg
     2461 atgtgtcact accaccgtgt gcactacgat ttgtagtgtt gttatcttga ctaccagaaa
     2521 cattgattga tgggatacta ccacttactg agctaggacg tttaaagtct tcgccatctc
     2581 tagatgaaat ttttgacatc acattttcat ataagaactg tggatattct tgttggctat
     2641 gtcccacaaa tgagttttca ccatattgtt taactttgct gaagcccatc cacactgaca
     2701 tagtgtattg aggtgtaaag ccgttaatcc acacgtcttt cgctgcatta tcaggtaaat
     2761 tatattgtga ataagtttca gcaccgtaag taccagtacc tgtcttagca cccatattta
     2821 ctccagatac accatggcca tatgcagaac catatggttt aaatgtacct tttagcatct
     2881 cagctaacat gtatgcagtg taatcactca tcgctttatg gctagtatga tcgtattcga
     2941 ttgtttcacc atcacgagta actacttttt gaattgaatg cgcgttgtta taagtaccac
     3001 cgttagcgat tgcagcaaat gctgatgcta attgtgttgg tgagaattct gaagcagaac
     3061 caccaagtac ttcagatgga ccaatatcgc cttcgtagtt taagccaagt ttggcagcga
     3121 atttcttagg tgcatcatta ccagcatttt gcttaactga ttgccaagct tttaaagctg
     3181 ggatattgaa actttgtcgt aaagcatcat aaattgatac agtaccgtga ctcttcacat
     3241 cgtagtttct aaatgtagag ccatcaactt gatatgaaga ttcatcttga atcgcatggt
     3301 ttgttgccca tttcatattt tcaatggcag gtccatacgc taagaaaggt tttaaagatg
     3361 aaccagtagg gtgtggatct gttgcttggt ttctgttaac gacgtctttg aaatcacgtc
     3421 caccagatat agcaactaaa ccaccagttt tactatcaag aatcgttgca ccaacttgtt
     3481 ggtctttatt cttgtagaag ctaccattat caacatcatt ttgtaatgtt ttttgaacat
     3541 ctttatccat gtttgtataa attttaatac cactttgtaa tacattacct aaattttcat
     3601 ctttgaatgc tttattattc attaattcag attttacaaa gttaacgtat gaattatact
     3661 cagaatcttg atttgtatca atgttttgac gttcttcagc agtacgattt actaagttcg
     3721 cttttaaatc gattttctta gcatcttccc actgtttatc tgtaatgcgt ttatgataat
     3781 gcattaagta taaaacagtg tttttacgat cttcagcagc ttttggatga tcataaatat
     3841 tatagttgtt tggaacctga ggtaaaccgg ctaaataagc ttcttccgct aagtttaaat
     3901 cttttaaatc tttattaaag taatacttag cagcagcttt aatacctgtt acgccatcag
     3961 agtagtaaat tttgtttaga tatacttgga agatatcatc tttactatac tcttgttcta
     4021 aacgatatga taagtatgct tcttgagctt tacgtccaat agatttatgt tgtgataaaa
     4081 atgcatcttt aacaacttgt tgtgttaatg ttgaggcacc ttcagaacca aatccaccag
     4141 tcaagttctt accaattgca ccgaataaac gtttataatc aagtgcgccg tgttcgtaga
     4201 aacgattgtc ttcagttgca agtactgcgt ctttcattga tttcggcacg tcttttaaat
     4261 ttacatgctc atgtctttgg ccattatcta atgttttaac aagttctccg ttcttgtcat
     4321 atatctttgc aggaatcgga tcttgtaatt tagcttcggt aaaagcaggt gctttccaag
     4381 cataataagc aaacaataag atacctagta aaagaacaac gaaaaatgca ataatcatga
     4441 agccaataat cttaataatc gttctcttca catttctatt cttttttgag ttggatttcc
     4501 caccattatt accatttttc ttaggctgag aagatccttt gttttccgtc atacgcggtc
     4561 ctcactttca tctaatatca acttatcaac tgcttttaga tagtctaatc ttggttgata
     4621 ctgataagga atatggtaac cattttttcg tatttcatca actgttatag actttttaat
     4681 attatcttta tatctcttcc aaaatatttc gaattttgaa tagggtaaaa gataaacttc
     4741 atctagcgtt ttaaaacgaa tcattaaaaa cacaatacct ttttgttgat atgcattttt
     4801 catatgttcg acttgatgat catgaatatt atttaaagga aaggacgtct tgtttttagt
     4861 ttcctttgct tcaaaatcaa tataataacc ttgataaacg ccgttgtaat cagttgttga
     4921 aggtgtacga aaataagctt cgttaatcac agctttactc cgtttgggat agttgacatt
     4981 aactatttgt accggcgtag gctttttgtg aataactgca atgtcgcttt taagataaaa
     5041 cgcatttgaa tgttcgatat ctttttcaag tgacatacca cgtccaccat actcaatatt
     5101 actaaaggca gcggtctttt tccctccgtc tatagcacta tttttacgat atggtttacc
     5161 atttggataa ttcataaatt tcaccacaca agtttggtag taaacgttgt ttattataca
     5221 caacattata gtgaaacacc aaacttaaat tagtataaat gcgaaagaca caatacacca
     5281 aagcttattt taacgtgatt tcagcattaa cacaataata ttataataca tttaccgtta
     5341 atgttggaat tttacacaca attttaatta attgaaaagt tttgcttata aaaatgaata
     5401 ctcattacaa tatttttgaa ttttgttata aaagtcgaat catgatc
//
LOCUS       DAKPJH010000142         5089 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.144, whole genome shotgun sequence.
ACCESSION   DAKPJH010000142 DAKPJH010000000
VERSION     DAKPJH010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5089
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.144"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            272..769
                     /locus_tag="OY092_002425"
     CDS             272..769
                     /locus_tag="OY092_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077342.1"
                     /translation="MSLFDRLSVLKNKSEIKLIESKQVVEDKVFEIRHGKLDDIPMTK
                     ERKRSEKTRKKLEKHESKVKEKEKRKQQREEEIEKRRIAKEEQEKRDVWIKENVFKII
                     VNEEGKRIIFCPKCGSENNVTATTWNVDEAENSEDIGTYFKRTCNLCGHSQKFNKDNP
                     KKIYE"
     gene            965..2236
                     /locus_tag="OY092_002426"
     CDS             965..2236
                     /locus_tag="OY092_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000368660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HCX1077343.1"
                     /translation="MDNHIRIFDNLFQSNISKFQNLTSKSYIIRNDNEKNSYLPMVQE
                     IRELFGKEGEIFSKSIGTHPDFFGIENTNEYQYICSLFVDISGSTKLALKYSLDKVKL
                     YKNAIISSAIEIFRAFDGHIHRIQGDAVLVYFGHKELEKSDAIINAINAASLMQYFNA
                     TTLKKFFESENLEPLKIRIGIDFGDDSSVLWSKYGIDGINEITSTSIHTDLASKFQNK
                     APSNKIMIGENINKYLDIPKKFRSIKIEKNNGVDVEKRYILNTNNLGRYSMEVFEWEK
                     YLNSFSMLPPFSTENEQFYSPRDLKIRCWIIDEKNQDKYEYIERGSALKKEMNLLFKL
                     EIYNQCLEFKNIKWRVVNYGEEAKKDKELEFEMNQYEGYQYCNQKTAYTGLHFMECYL
                     YDINDKIICHDSFGLFINDNNREVRKLGIED"
     gene            2233..2718
                     /locus_tag="OY092_002427"
     CDS             2233..2718
                     /locus_tag="OY092_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000073145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077344.1"
                     /translation="MSNVKKDEYIKLHQSYLNEYIKFADAKALAIISINGFILNFNFS
                     KRNIKFHNTEDIFNFTAFILLIITIILAAFAVYPRTNNRSEKGIIFWDNINSMGEKEF
                     IEKVKFEKEEELLEKTIQQNYFLAKTASMKYSIIRKVFIISALGYSCLLFSSIFQIIC
                     S"
     gene            2757..4271
                     /locus_tag="OY092_002428"
     CDS             2757..4271
                     /locus_tag="OY092_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017175164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HCX1077345.1"
                     /translation="MATIGFEEKLWQAADKLRGSMDAAEYKNVALGIIFLKYVSDSFE
                     EKYEELLNDEYADEEDKDEYLAENIFWVPKESRWQYINDNSKKPEIGQIIDKAMIAIE
                     RENESLKGVLPKDYARPALDKEKLGDIIDLFTFKVGDSESKKQDILGRVYEYFIAKFA
                     SAEGKNAGEFYTPASIVKLLVEMIEPYQGRIYDPCCGSGGMFVQSEHFIERHQGRIDD
                     IAVYGQESNPTTWKLAKMNLAIRGIDNNLGDHHADTFHNDLHKDLKADFILANPPFNA
                     SDWGREKLQDDYRWKFGIPPKGNANYAWIEHMISKLAPSGTAGFVLANGSMSTSGKDE
                     LEIRKNLIEQDMVECIVTLPGQLFYSTQIPVCLWFMTKNKAKNGKNERRGEVLFIDAR
                     NIGSMVSRTLKEFSDDEIKDIANVYHSWRGTNNNQYEDKAGFCKVAKTEEIKNNEYIL
                     TPGRYVGLAEVEEDSEPFEQKMERITADLSEQFAKSKELEDQIRKSLEGLGYGV"
     gene            4261..>5089
                     /locus_tag="OY092_002429"
     CDS             4261..>5089
                     /locus_tag="OY092_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCX1077346.1"
                     /translation="MEFETFNLTDLYTISSGLSKNRKYFGTGTPFLTFKDVFDNLILP
                     NEFSGQVITEEKEREKYSVKKGDLFLTRTSEKQNELGISAVALKDYKNATFNGFTKRL
                     RPNKYCENKLLPVFAAFYFRSNNFRNQVNSMSIMSTRASLNNEMISKLKITIPSLQNQ
                     MKISHILLALLKKEKINQKIIANLEELSQTLFKRWFVDFEFPDENGNPYKSSGGEMVD
                     SELGEIPRSWKVDELGNYIKIKSGKRPKNKVDKEDIENVVPIIGASKIVGYTNDYLYN
                     "
BASE COUNT         2080 a          526 c          925 g         1558 t
ORIGIN      
        1 tacaattaat gcatatccta caaaattcat tgagaacaat ttttcgaaaa agaagaacta
       61 tatgaaatga ttataagaaa aattacatta ttatggtatt aatgaattat tatttattga
      121 cctagatagt catatatatt ggataataga aggaaatacg tatggttata ataatataac
      181 aaatgggtta aatttaatta acgaataata gctaaaatct gataagtaaa tggtataata
      241 tttgtaaata taaattgttt ggaggtatca tatgtcttta tttgatagac taagtgttct
      301 aaaaaataaa tcagaaataa aacttataga aagtaagcaa gtagttgaag ataaagtatt
      361 tgaaatacga catggtaaat tagatgatat accaatgact aaagaaagaa agcgttcaga
      421 aaaaacgagg aaaaaacttg aaaaacatga atcaaaggta aaagaaaaag aaaaaagaaa
      481 gcaacaaaga gaagaagaaa tagaaaaaag gagaatagca aaagaagagc aagaaaagcg
      541 tgatgtttgg attaaagaga atgtatttaa aattatagta aatgaggaag gtaaacgaat
      601 aattttttgt cctaaatgtg gtagtgagaa taatgtaact gctactactt ggaacgtaga
      661 tgaagctgaa aatagtgagg atattggaac atattttaag agaacttgta atttatgcgg
      721 acattctcaa aaatttaata aagataaccc taaaaaaatt tatgaatagg aataaagaat
      781 tgatacattt tctggataag tgaaaaagac aaattctatt gaaataatat agaatttgtc
      841 tttttttata atttttagtt gtttaaatgt tagaatttat aaaacctcat tatcaaccga
      901 tacgcagagg cgtatcataa gtaggggtag tattagccaa tttaataaat aaagaggtga
      961 cagaatggac aatcacataa gaatttttga taatttattt caaagtaata tttcaaaatt
     1021 ccaaaacctt actagtaaat catacattat aagaaatgat aatgaaaaga atagttatct
     1081 tcctatggtt caagagataa gagagttgtt tggaaaagag ggagaaattt tttctaaaag
     1141 tataggaaca catcctgact tttttggaat agaaaatact aatgaatacc agtacatttg
     1201 ttccctgttt gtagatatat ctgggtctac aaagctagct ttgaaatata gtttggataa
     1261 agttaaactt tataaaaatg cgataatttc tagtgctata gaaatatttc gtgcatttga
     1321 cggtcatatt catagaatac aaggagatgc ggtgcttgtt tattttggac ataaagaact
     1381 ggaaaaaagt gatgcaataa ttaatgcaat caacgctgcg tcattaatgc agtattttaa
     1441 cgccacaaca ttaaaaaagt tttttgaaag tgaaaattta gagccgttaa agattagaat
     1501 aggaattgat tttggtgatg attctagtgt attgtggtca aaatatggaa ttgatggaat
     1561 taatgaaata acttctacca gtatacatac tgacttagca tcaaaattcc aaaacaaagc
     1621 cccttcaaat aagattatga ttggagaaaa tataaataaa tatcttgata ttcctaaaaa
     1681 gtttagaagt ataaaaattg agaagaacaa tggtgttgat gttgagaaaa gatatatttt
     1741 aaatacaaat aatctgggaa gatattctat ggaagtgttt gaatgggaaa aatacttgaa
     1801 tagtttttca atgttgcctc ctttttctac agaaaatgaa caattttact cacctagaga
     1861 tttgaaaata agatgttgga ttattgatga aaaaaatcag gataaatatg aatatattga
     1921 aagaggtagt gctttaaaaa aagaaatgaa tttgttattt aaattagaaa tttataatca
     1981 atgtctagaa tttaaaaata ttaaatggag agtggtaaac tacggagagg aggcaaaaaa
     2041 ggacaaggaa ttagaatttg aaatgaatca gtatgaaggg tatcagtatt gtaatcaaaa
     2101 gacagcttat acaggattac attttatgga atgttatttg tacgacatca atgataaaat
     2161 aatttgtcat gatagttttg gtctttttat aaatgataat aatagagaag tgagaaaatt
     2221 aggaatagag gattgagtaa tgtgaaaaaa gatgagtaca taaagttaca tcaaagctat
     2281 ctaaatgaat atattaaatt tgctgatgcc aaggcattag ctatcataag tattaatggc
     2341 tttattttaa attttaactt ttcaaaacgt aatattaaat ttcataatac tgaagacatt
     2401 ttcaatttta cagcttttat attattgata attacaatta tactagcagc atttgcagta
     2461 tatccaagaa caaataatag aagcgaaaaa ggaattattt tttgggataa tataaatagt
     2521 atgggagaaa aagaatttat agagaaagtg aaatttgaaa aagaggaaga attacttgaa
     2581 aagacgatac aacaaaatta ttttttagca aaaactgcat ctatgaaata ttcaatcatt
     2641 agaaaggttt ttataatttc agcattaggt tattcctgtt tattattttc aagtatcttt
     2701 cagattatat gctcttgaat tttcagtttt aacatgaaaa ggagaaaaat aaaaatatgg
     2761 caacaattgg atttgaagaa aagttatggc aagcggcgga taagttacgt ggaagtatgg
     2821 atgcagcaga atataaaaat gtagcattag gtattatatt tttaaaatat gtttctgatt
     2881 cttttgagga aaagtatgaa gaattattaa atgatgaata tgccgatgaa gaagataaag
     2941 atgaatactt agcagaaaat attttctggg ttcctaaaga atcaagatgg caatacataa
     3001 atgataattc taagaaacca gaaattggtc aaattatcga taaagcaatg atagcaattg
     3061 aaagagaaaa tgagtcttta aaaggcgtat tacctaaaga ttacgcaaga cctgcattag
     3121 ataaagaaaa attaggcgat attattgacc tatttacatt caaagttgga gattctgaaa
     3181 gtaagaagca agatatttta ggtcgtgttt atgaatactt tatcgcaaaa tttgcaagcg
     3241 ctgagggtaa gaatgctggg gaattctata caccagcttc aatagttaaa ttgcttgttg
     3301 aaatgattga accatatcaa ggtagaattt atgacccttg ttgtgggtcg ggcggaatgt
     3361 ttgtacagag tgaacatttt atcgaacgtc atcaaggtcg tatagatgat attgctgttt
     3421 atggtcaaga atctaatccg actacttgga aattagcgaa aatgaatttg gctattcgag
     3481 gtatagataa taatttaggt gatcatcatg cagacacatt tcataatgat ttacataaag
     3541 atttgaaagc tgattttata ttggctaatc caccattcaa tgcaagtgat tggggacgag
     3601 aaaaattaca agatgattac cgctggaaat ttggtattcc acctaaaggc aatgccaact
     3661 atgcatggat tgaacatatg atttctaaac ttgccccaag tggtacagca ggatttgttt
     3721 tagcgaatgg ttcgatgtct acaagtggta aagatgaatt agaaatacgt aaaaacttaa
     3781 ttgaacaaga catggttgag tgtattgtca cattaccagg gcaactattc tattcaactc
     3841 aaattccagt atgtttgtgg ttcatgacaa aaaataaagc taaaaatggc aagaatgaac
     3901 gacgtggaga agtactattt atagatgcta gaaatatagg aagcatggta tcaagaacat
     3961 taaaagaatt ctcagatgat gaaataaaag atatagcaaa tgtttatcac tcatggcgtg
     4021 gaacaaacaa taaccaatat gaagataaag caggtttctg taaagtagca aagacagaag
     4081 aaataaaaaa caatgaatat atcttaacgc cgggacgtta tgtaggatta gcagaagtag
     4141 aagaagactc agaaccattt gaacagaaaa tggaaagaat cacagcagat ttaagtgaac
     4201 aatttgcgaa atcaaaagaa ctcgaggacc aaatccgtaa gtcattggag ggattaggtt
     4261 atggagtttg aaacatttaa tttaactgat ttatatacta ttagttcagg tttatcaaaa
     4321 aatagaaaat attttggtac tggtacacct tttttaacat ttaaagatgt attcgataat
     4381 ttaatattac ctaatgagtt ttctgggcaa gttataactg aagaaaaaga aagagaaaag
     4441 tattcagtta aaaaaggaga ccttttttta acaagaacta gtgagaaaca aaatgagtta
     4501 ggtataagtg cagtagcttt aaaagactat aaaaatgcga cttttaatgg atttaccaaa
     4561 agattaagac caaacaaata ttgtgagaat aaattgttac cagtatttgc tgcattttat
     4621 tttagaagta ataattttag aaatcaagta aattctatgt ctatcatgtc tacaagagca
     4681 agtttaaata acgaaatgat ttcaaaactt aaaattacta tacctagtct tcaaaatcag
     4741 atgaaaatta gtcatatact attagcactt ttaaaaaaag aaaaaatcaa tcaaaaaatc
     4801 atagcaaatc ttgaagaact ttctcaaaca ctattcaaac gttggtttgt tgattttgaa
     4861 tttcctgatg aaaatggaaa tccatacaaa tcaagcggtg gagagatggt tgatagtgaa
     4921 ttgggtgaaa tacctaggag ttggaaagtt gatgaattag gaaattatat aaaaataaaa
     4981 agtggtaaaa gacctaaaaa taaagttgat aaagaagata tagaaaatgt ggtgccaata
     5041 attggtgcta gtaaaatagt gggttatacg aatgattatt tatataatg
//
LOCUS       DAKPJH010000143         5088 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.145, whole genome shotgun sequence.
ACCESSION   DAKPJH010000143 DAKPJH010000000
VERSION     DAKPJH010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5088
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.145"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            18..935
                     /locus_tag="OY092_002430"
     CDS             18..935
                     /locus_tag="OY092_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HCX1077347.1"
                     /translation="MKKFIGSVLTTTLILGGCSMMENESSKDTNTETKSVPEEMEASK
                     YVGQGFQPPAEKDAIEFAKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGVEVYVH
                     CDDHDIVFNASIPFDKSIIDSDSSLRSEDKGDDMSTLVGTVLSGFEYRAQKEKYDNLY
                     KFFKDNEEKYQYTGFTKEAINKTQNSGYENEYFYIVANIPTLQEYRKYYEPLIKKNNL
                     DFKKGMKDARRGVGYKAEIELYTTLFSKSRNFSKDKKLDDAIDLSESVKKLNLNLENT
                     KIFLQLTKSTINTKQVNYSDNKPIKIEVE"
     gene            938..2974
                     /locus_tag="OY092_002431"
     CDS             938..2974
                     /locus_tag="OY092_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077348.1"
                     /translation="MNNINDRDLTELSGYWVYQDIKDGSKFRVNDKKFKQVEEITKVA
                     NKNNSSDIKVYELLDENETPTGKQVLLFQGTDNQKSDVKSNPFRGKVADDWIENIKLM
                     NDKNKSTSLLEQNNAYIKSYEQKLKDADTLKSSDFLRKYKQNPSTYKNKTIKSDGGNS
                     QGGASANHQGLINPNKNIVSTNPAMLPKSIWENFKSQNFENMINYHSKFDILSWLQDP
                     FATPTLGKRVNLETGVPTMDGLVNSHLGYKRKLNPRYNTYKDLAVYKIKSVKDTMIKN
                     GKKVKKTIEIDINMDDRIPINVWTGDSIARTGKGTPIKLNLENLSALSNLVTGETSNM
                     LTDCVNYLNESYNISQVENSNFGERKHKLKQDFKKIVEVDILEGMSRELTSFKQDVFS
                     AIDDVKKNLVVIILIAPAAGVLILELNTIEEILEDLDKKLQRGIESLHDSLDNVIKEM
                     FKNLDHDFEDGVTEEMMKHLNVVNNNINFVKKQNDVYGEQITDIKNIMSHQDATVMDG
                     NLSINYSGEHMISGQVQSSNYLTRKMTILKNHIDNAVNKISDYVQETYNNYFEPVLNY
                     ILEVIHSVETAVRHIYEISSLIYKSGMKIKIKAMGINVDEIDKMLEVLKNKLKNLDEF
                     LNNLKIASPILENHLDDIVRNMKPLIVNQIFEPSHYDDMFISRKALTPVFSSVL"
     gene            complement(3017..4222)
                     /locus_tag="OY092_002432"
     CDS             complement(3017..4222)
                     /locus_tag="OY092_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCX1077349.1"
                     /translation="MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQ
                     KEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWLEYHIKTSGSKLTTLNNIKIRIR
                     NIKRYSSENLLLNKLDTKYMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPN
                     EYLLTNVKIPKRRKTIEDIEKDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIAS
                     ILEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKR
                     SISINSRTVEIFKKIILENKMLKRWNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTK
                     ALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDREL
                     TQKLENIPS"
     gene            4348..4962
                     /locus_tag="OY092_002433"
     CDS             4348..4962
                     /locus_tag="OY092_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCX1077350.1"
                     /translation="MTQFLGALLLTGVLGYIPYKYLTMIGLVSEKNKVINTPVLLIFS
                     IETCLIWFYSFIIFNNVDLKNLNLIQLLTGLKANILFLFIFVLTVFVFNPLIVKFIIW
                     LINITRKFMKLDCISLLDKRDKLFNNNGKPVFIVIKDFENRIIEEGELKTYNSAGSDF
                     DLLEVERQDFKVSDLASNDELYIKHTLVDLKQQIKLDLYLMNEY"
     gene            complement(4959..5084)
                     /locus_tag="OY092_002434"
     CDS             complement(4959..5084)
                     /locus_tag="OY092_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000227848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077351.1"
                     /translation="MVDKNKKQETTRSNPLNKSFEKSGASEKLKSTLSEKAKKKD"
BASE COUNT         1857 a          633 c          845 g         1753 t
ORIGIN      
        1 attattcgag gtgtcatatg aaaaagttca ttggatcagt tttaaccacg acattaattt
       61 tagggggatg ttccatgatg gaaaatgaat caagtaaaga cacgaataca gaaacaaaat
      121 cagtaccaga agaaatggaa gcttcaaaat atgtaggaca aggcttccaa ccacctgcag
      181 aaaaagatgc gattgaattt gcgaagaagc ataaagataa aattgccaaa cgaggcgaac
      241 aattttttat ggataacttc ggtctaaaag ttaaagctac caatgttgta ggtagtggcg
      301 acggtgtaga agtttatgtg cattgcgatg accacgatat cgtatttaat gcgagtattc
      361 catttgataa atcaattatt gacagtgata gctcattaag aagtgaggat aagggcgatg
      421 atatgagtac tttagttggt acagtactaa gtggatttga atatcgagca caaaaagaaa
      481 agtatgataa cctatataaa tttttcaaag ataacgaaga gaaataccaa tatacaggat
      541 ttacaaaaga ggcaattaac aagacacaaa atagtggata tgaaaatgaa tatttttata
      601 tcgttgcaaa tataccaaca cttcaagaat atagaaaata ttacgaacct ctgattaaaa
      661 aaaataatct agattttaaa aaaggtatga aagatgctag aagaggagta ggctacaaag
      721 ctgaaatcga attatataca acactgtttt cgaaaagtag aaacttttca aaggacaaga
      781 aattagatga tgctatagat ttatccgaaa gcgtgaaaaa gttaaacctt aatttagaaa
      841 acacgaaaat atttttacaa ctaacgaaat ctaccattaa tactaaacaa gtaaattata
      901 gtgataacaa acctatcaag attgaggttg agtgaaaatg aacaatataa acgatagaga
      961 tttaactgag ttaagtggtt attgggttta ccaagatatt aaagatggta gtaaatttag
     1021 agttaacgat aaaaaattca aacaagtcga agagataacg aaagtagcta ataaaaataa
     1081 tagttcagat ataaaagttt atgaactatt ggatgaaaat gaaacaccta caggcaaaca
     1141 agtattatta tttcaaggta cagataacca aaagagtgat gtgaaaagca atccttttcg
     1201 tgggaaggtt gctgatgatt ggattgaaaa tataaagtta atgaatgata aaaataagtc
     1261 aacttcttta ttagaacaaa ataatgctta tattaaatcg tatgaacaga aactaaaaga
     1321 tgcagataca cttaaaagct ctgatttttt aaggaaatat aagcaaaatc cgtctacgta
     1381 taaaaacaaa actattaagt ctgatggagg caattctcaa gggggagcaa gtgctaacca
     1441 ccaagggttg attaacccga ataaaaatat agtttctaca aaccctgcca tgttaccaaa
     1501 gtcaatatgg gaaaatttca aatctcaaaa ctttgaaaat atgattaatt atcatagtaa
     1561 gtttgatatt ttatcttggc tgcaggatcc atttgccact ccgacactag gaaaacgagt
     1621 gaatttagaa actggtgtgc caacgatgga tggattagta aatagtcatt taggttataa
     1681 aagaaaatta aatccaagat ataatactta taaagattta gcagtttata aaattaaatc
     1741 agttaaagat actatgatta aaaatggtaa aaaagtcaaa aaaactattg aaatcgatat
     1801 aaatatggat gatagaattc caattaatgt gtggacagga gattcaatag cgagaacggg
     1861 taaagggact cctataaaat taaatctaga aaatcttagt gcattaagta atttggtaac
     1921 tggtgaaaca agtaatatgt taaccgattg tgtaaattat ttgaatgaga gctataatat
     1981 ttcacaggtt gaaaattcta attttggaga aagaaaacat aaacttaaac aagattttaa
     2041 aaagattgtc gaagttgata tccttgaagg aatgagtagg gaattaactt cttttaaaca
     2101 ggatgtattt agcgcaattg atgatgtcaa aaaaaatctt gttgtaataa tcttaatagc
     2161 tccagcagct ggagtcctta ttcttgaatt aaatactatt gaagaaattc ttgaagattt
     2221 agataaaaaa ttacaacgtg gcatagaaag tttacatgat tcacttgata acgtaattaa
     2281 agaaatgttt aaaaatttag atcatgattt tgaagatggc gtgacagagg aaatgatgaa
     2341 gcatttaaat gttgtgaata ataatataaa ttttgtgaaa aagcaaaatg atgtatatgg
     2401 agagcagata accgatatta aaaatataat gtctcatcaa gatgcaacgg taatggatgg
     2461 aaacttatct attaattata gcggtgaaca tatgatttcg ggtcaagtac aatcttctaa
     2521 ttatttaacc agaaaaatga caattttaaa aaaccatatt gataatgcag ttaacaaaat
     2581 tagtgattat gttcaagaaa cttacaataa ttattttgaa ccagtattaa actacattct
     2641 tgaagttata cattcggtag aaacagctgt gagacatatt tatgaaataa gcagtttaat
     2701 atacaaatca ggaatgaaaa taaagataaa ggcaatggga ataaatgttg acgaaattga
     2761 taaaatgctt gaagttttaa aaaataaact taaaaactta gacgaatttt taaataattt
     2821 aaaaatagct tcgccgattt tagaaaatca cttagatgat atagttagaa atatgaaacc
     2881 gttaattgtt aatcagattt ttgaaccatc tcattatgat gatatgttta tttcaagaaa
     2941 agctttaacg ccagtgttct caagcgtttt ataaagcttg taaaaaatat aagggcaaaa
     3001 aaagggcgga tttaagctaa cttggaatgt tttcgagttt ttgagttagt tctctatcca
     3061 ttttttcagt tacatgagta tatatgcgaa tggttgtttt ttcatctaca tgtcctaccc
     3121 ttttcataat tgcttttaaa gaaacattca tttctactaa taaagttatg tgtgtatgtc
     3181 taaatgtgtg cgtggtaact ttcttattca tatttaaagc ttttgtagtt ttcttaagca
     3241 caccggcgat ttgattatta cataaaggat tccctttttt tgttgtgaat atgaaccctc
     3301 tgtcaacata gctcgaattc catcttttca acattttgtt ttccagtatt atctttttaa
     3361 aaatttctac ggttctagaa ttgatgctga tacttctttt tgaacttata gtctttgtag
     3421 tgtctttgta tccgaatcct tcctcgtatt taatgcggtg aattgtacct gttatattga
     3481 tagttttgtt taataaatct atatcttttt cctgcagtgc ttgtagttct cctatgcgca
     3541 taccagttaa agcctgtact tctaagatgc tggcaattaa aatgcgattt cgcttgtgta
     3601 acttattatc atttagtata tgatcacgta tctgtaggac ttggttcatt tctaaatagt
     3661 tgtacatttt agattcatct ttttcgatat cctctattgt ttttcttctt ttaggaattt
     3721 tgacattagt taacaaatat tcatttggat aattgtaaaa tttaactgca tatttaatag
     3781 ctcctttcat atctccgagt tgacgggtta cttgattttg agaatagata tctgataatt
     3841 tattaataaa tatctgcata tattttgtat ctagtttgtt taaaagcaag ttctcagagc
     3901 tgtatcgttt aatgtttcta attcttattt ttatattatt aagagtagtc aactttgaac
     3961 ctgatgtttt tatatgatat tcaagccatt catctaatag cgcgtgaaaa gtcaaagttt
     4021 ttaattcgct tgacgacttg ttgttcagtt tttcttttat tttttcttct aaacgaaaca
     4081 ttgcttcttt ttgagattgt tttgtattct tgttcaacac aacacttacg cgcttccatt
     4141 tatctgtgta tggatcttta tacttctcgt agtatctgta tttagtttcg ttatttttgt
     4201 ttttaaattt ttcaatccac atgtttatac ctcctgcaag aacgtatgtt ctataaaata
     4261 ttaaaaaata ataagggtag tcgggctacc cgtaatttag tactaggtac taaatgtgtt
     4321 ataataaaat aaaaagtagg tgataagatg actcaatttc taggggcgct tcttcttaca
     4381 ggagttttag gttacatacc atataaatat ctaacaatga taggtttagt tagtgaaaaa
     4441 aacaaggtta tcaatactcc tgtattattg attttttcta ttgaaacatg tttgatatgg
     4501 ttttatagtt ttataatttt taataatgtt gatttaaaaa atttgaattt aattcagttg
     4561 cttacaggtc taaaagcaaa tattttgttt ctatttattt ttgttttaac agtgtttgta
     4621 tttaatcctt taattgttaa atttattatc tggttaatta atataaccag aaagtttatg
     4681 aaattggatt gtataagctt attagacaaa agagacaagt tgtttaataa caacggtaaa
     4741 ccagtattta tagttataaa agactttgaa aacagaatca ttgaagaggg tgaacttaaa
     4801 acctataatt cagctggtag cgatttcgat ttactagaag ttgagcgaca agatttcaaa
     4861 gtatctgatt tagcgtcaaa cgatgaattg tatattaaac atacgcttgt agaccttaaa
     4921 caacaaatta aattggattt atatttaatg aatgaatact aatctttttt cttagctttt
     4981 tctgataaag tgctttttaa tttttcgctg gcgcctgact tttcaaaact tttgtttaat
     5041 gggttactac gagtagtttc ttgttttttg tttttatcta ccataaaa
//
LOCUS       DAKPJH010000144         5082 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.146, whole genome shotgun sequence.
ACCESSION   DAKPJH010000144 DAKPJH010000000
VERSION     DAKPJH010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5082
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.146"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..215
                     /locus_tag="OY092_002435"
     CDS             <1..215
                     /locus_tag="OY092_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HCX1077352.1"
                     /translation="YNTNVKHTTLEAFVTTVNDLGIELIINEALREVRKRQLIELIDD
                     ALVNKDEAAFNQYTAEYKNLEAFLGE"
     gene            complement(296..1282)
                     /locus_tag="OY092_002436"
     CDS             complement(296..1282)
                     /locus_tag="OY092_002436"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HCX1077353.1"
                     /translation="MKFISNNNITDPTLNLAMEEYVLKNLPAEESYFLFYINRPSIIV
                     GKNQNTIEEVNQTYIDAHNIDVVRRISGGGAVYHDTGNLNFSFITDDDGNSFHNFQKF
                     TEPIVQALQSLGVNAELTGRNDIQVGQAKISGNAMVKVKNRMFSHGTLMLNSDLDEVQ
                     NALKVNPAKIKSKGIKSVRKRVANIQEFLNDPLEIEEFKKIILKTIFGETEVEEYKLT
                     DEDWENIEKLSNDKYRTWEWNYGRNPKYNFEREEKFEKGFVQIKFDVKRGKIEHAKIF
                     GDFFGVGDVTDLENALVGCLHDFEHIEEALSEYDLYHYFGDIVRHELIRLMS"
     gene            1481..1657
                     /locus_tag="OY092_002437"
     CDS             1481..1657
                     /locus_tag="OY092_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkvS family protein"
                     /protein_id="HCX1077354.1"
                     /translation="MTVAEVGNIVEFMDGLRGRVEKINDNSVIVDLTIMENFNDLDLP
                     EKTVINHKRYKIVE"
     gene            1672..2274
                     /locus_tag="OY092_002438"
     CDS             1672..2274
                     /locus_tag="OY092_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HCX1077355.1"
                     /translation="MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAG
                     ISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVN
                     WKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWVAILITAICSSSLFIYLDNWWI
                     VTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA"
     gene            2384..2571
                     /locus_tag="OY092_002439"
                     /pseudo
     CDS             2384..2571
                     /locus_tag="OY092_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500662.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
     gene            3218..3490
                     /locus_tag="OY092_002440"
     CDS             3218..3490
                     /locus_tag="OY092_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001790097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HCX1077356.1"
                     /translation="MFGTILYLTLALGLSTAAYASTEYAEGGTWSHGVGSKYVWSYYY
                     HGHKGHGATAIGKYRSFSGYTRAGVKAKASATKHNCWINRAYYNIY"
     gene            3534..>5082
                     /locus_tag="OY092_002441"
     CDS             3534..>5082
                     /locus_tag="OY092_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="HCX1077357.1"
                     /translation="MKWFKLILDVTIFILIAILLFVYTYKENEEILPDTKYPIAVTDW
                     NKKYSKNEIYKHINQFAKNENVAIYKSTSNYTNKNVDKDIYVFNKSKATTITPFNAKY
                     NIHYLSDDEVLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESYKIDHMMIAVGVIK
                     QMNIVVPLSSLLIVYFIYYIFEKNINFKAYAIKYLNGFTLRKIIFENFSKKCTYWVTL
                     IITQILLTTSVLWILNYTGNLDLFILRIVLLSCLFILTISVINLWTFLMLLNLNIANM
                     IKGKQHFKTIRFINTVCKSILLVLIANVMIENTSVIKDLNKIKETEKYWNVLDDYYTI
                     EFAPYHETKQSLIDNMVRSEQLVKASEAENNAILFKPKGDSVDNDNFSPDEGNVILVN
                     NQFWSIYHKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEINQAYHSWFEFVHNKNNKES
                     KLSIQFINKNDYRIFTFDARDSRHLSFIEAPIIVNVQASDLSNDFYYAMISQGGYLFK
                     NYDALVKN"
BASE COUNT         1802 a          703 c          760 g         1817 t
ORIGIN      
        1 aatacaatac taatgttaaa catacaactt tagaagcgtt tgtcacaacc gtcaatgatt
       61 tgggtattga attaattatc aatgaagcac ttcgagaggt aagaaaacga cagctcatag
      121 aacttataga tgacgcactc gtcaataaag atgaagcagc atttaatcaa tatacggcag
      181 aatacaaaaa tttggaggca tttctcggtg aataacattg attcgaattc cataacgcaa
      241 tcataaaagg actattctta acatctcata catgtaagaa tagtccttta atcgtttaag
      301 acattaatct aattaattca tgtctaacta tgtcaccgaa atagtgatat aaatcatatt
      361 ctgatagtgc ttcttctata tgctcaaagt cgtgtagaca gccaactaat gcattttcaa
      421 gatcagtgac atctccgaca ccaaagaaat caccgaaaat ttttgcatgt tcgattttac
      481 ctcgtttaac atcaaactta atttgtacaa atcctttttc aaatttttcc tcgcgttcaa
      541 agttatattt agggtttcta ccataattcc attcccaagt tctatatttg tcgttactta
      601 acttttcaat attttcccaa tcttcatccg ttaatttata ttcttctact tcagtttctc
      661 caaagatagt tttcaagatg atttttttaa attcttcaat ttctaaaggg tcatttaaaa
      721 attcttgaat gtttgctact cgtttacgaa cagatttaat accttttgat ttaatcttag
      781 ctggattaac ttttagtgca ttctgaactt cgtctaaatc actatttaac atcaacgtac
      841 catgactaaa cattctattt ttaactttaa ccatggcatt tcctgagatt ttcgcttgtc
      901 caacttgaat atcgttacga ccagttaatt cagcatttac gcctaaagat tgtaatgctt
      961 gaacaattgg ttcagtgaat ttttggaaat tgtggaaact gttgccatca tcatctgtta
     1021 taaaactaaa gtttaaattg ccagtatcat gataaacagc gccaccacca gaaattcttc
     1081 taactacatc gatgttgtga gcatctatat atgtctgatt tacttcctct atcgtatttt
     1141 gattctttcc aacaatgata gatggtctat ttatgtaaaa taaaaagtaa ctttcttctg
     1201 ctggtaaatt ttttaaaaca tattcttcca ttgctaagtt taaagttgga tctgtaatat
     1261 tattattact aatgaatttc attacaatct ctcccttata tctatatata ttctctactt
     1321 atttatgcct taactttgct caaaatgcca attatatact cacaaatcat tctaaatatc
     1381 ggcttaaagt tacattttat tatttttgat tgttaatagt ttatttgtta agtgaatttt
     1441 agtacaatat aatttagtta tgatttaagg aggacttaaa atgactgttg cagaagtggg
     1501 taacattgtt gagtttatgg atggattaag aggtcgtgtt gaaaaaatca acgataactc
     1561 tgttattgtt gacttaacaa ttatggaaaa ttttaatgac cttgatttac cggaaaaaac
     1621 tgttatcaat cataaacgat ataagattgt tgaataagaa ggtaagttat aatgaataaa
     1681 atctcgaagg ctttaacttg gtttattata agtttcatta tatttcatct catattattt
     1741 attatgtggg gcgaacacca agaatactgg tatttatata caggtataat gctaattgct
     1801 ggtatcagtt atgtatttta tcaaagagat attgaatcta agcggttgct tacatcaatt
     1861 ggtgttggta ttattacggc aattatttta attatgcttc aacttttatt ctcacttata
     1921 acttctaatt taagttatag ttcattaatt aaagaattag caagaacagg tgtcaattgg
     1981 aagtggcaaa tgttagtaac tttacttttt gtcattccat gtcacgagtt atatatgaga
     2041 actgttttac aaaaagaatt aacacatttt tcaataccga aatgggtagc tatattaata
     2101 actgcaattt gttctagttc attatttatt tatttagata attggtggat agtaacattt
     2161 atatttgttg cacaagtgat attatcatta agttatgagt atactcgacg catagcaaca
     2221 acatccgttg cgcaaattgt agctattata ttgttattaa tttttaatgc ttaaaaaagc
     2281 ttttcttaga cgtctgtgtt ctaagaaaag cttttttgct taagaatagc aatacgaaga
     2341 ttcgaggcat gcttcattat agtggtaata tttttcgagc aagttgaatt gatggtggct
     2401 atctgagtaa aggggggtgg tgcctatggc attacttaac acttttgaaa ggaaaagcct
     2461 attgtgacat ctattgcaaa cgcattacat ttaatgttaa gtttcggtat gtttatcgtc
     2521 actttcattg gtatagtagt agcaataata aatttaagca ataaaaaata accatcattt
     2581 caaaactttg acatagaatg atggttaaag aaaatctcat ttagtcaccg tctttttaac
     2641 gggctcatta ggcgacatgt tactgcatgt cgtcttttta catttttata gtaacatatc
     2701 ttttatttaa ttgtctatgt ttattagatg tgtaacaaaa ttttgaagta tttttcgtat
     2761 attgcctgct aaacatgtca gatttgaaag gaaaatcata ctgtggtaga aatcaattat
     2821 gattatatgg tagtacttat aaataagtga tttctattga atatgtaatg aagttcatat
     2881 attaataaaa ctttcattgg tatagtagtc gcaataatta atttaaacaa taaaaaataa
     2941 ccatcatttc caaactttga caaagaataa tggttaaagc aaacctcatt tagtcaccgt
     3001 cttttaacgg gttcaatagg cgacatgttc ctgtatatcg tctatttatg cactgcgcaa
     3061 tttaataata atacaattac actttgatgt ccatttaaca tgaagtagtt gaaatttgta
     3121 gcaaataaat tcatcttgaa atattcagaa aattctgtat aatttaaata gagagatata
     3181 gattaaatat gaagaggtgt ttttatagaa gaataaaatt tttggcacta tattatattt
     3241 aactttagca cttggattat caacagcagc ttatgcatct acagaatacg cagaaggagg
     3301 cacttggagt cacggtgtcg gcagtaagta tgtttggtct tattattatc atggtcataa
     3361 aggacatggt gcaacagcta ttggaaaata tagatcattt agtggttata caagagctgg
     3421 tgtaaaagca aaagcatcag ctactaaaca taattgctgg atcaatagag cgtattataa
     3481 catttattaa atactaaaaa atcatagaaa ataaacaacg caagaggtac aacatgaaat
     3541 ggttcaaatt aatacttgat gttacaatct tcattctgat tgctatattg ttatttgttt
     3601 atacatataa agaaaacgaa gaaatattgc ctgatactaa ataccctata gcagtaactg
     3661 actggaataa aaaatatagt aaaaatgaga tttataaaca tataaatcaa ttcgctaaaa
     3721 atgagaacgt agcaatctat aaatcaactt caaattatac aaacaaaaac gtagataaag
     3781 atatatatgt atttaataaa tcaaaagcaa caactatcac tccttttaat gctaaatata
     3841 acattcatta tttaagtgac gacgaagtat taaaaaaaga tatcaaaggg agttattttg
     3901 taaaagacaa aaattttgac gtgtctaaat tcataaattt tttaaaagaa tatggtgtta
     3961 ctgctgaatc atacaaaata gatcatatga tgattgccgt tggtgtcatt aaacaaatga
     4021 atatagtagt tccattatcc tcacttttaa tcgtttattt tatttattat attttcgaaa
     4081 agaacattaa tttcaaagcg tatgcgatta agtatttaaa tggttttaca ttaagaaaaa
     4141 taattttcga aaatttttca aagaaatgca cgtattgggt aacgttaatc ataactcaaa
     4201 ttcttttaac tacaagtgta ctttggatat taaattacac gggtaattta gatttattca
     4261 tattaagaat agttctgctt tcatgtcttt tcattttaac gattagtgtt attaatttat
     4321 ggactttctt aatgttacta aatttaaata ttgccaatat gattaaaggt aagcagcact
     4381 ttaaaacaat tcgttttatt aatacagttt gtaaaagtat tctcttagta ctaatagcta
     4441 atgtaatgat agaaaatact agtgttatta aagatttgaa taaaataaaa gaaactgaga
     4501 aatattggaa tgtattagat gattattaca cgattgaatt tgcaccttat cacgaaacaa
     4561 aacaaagttt gattgataat atggtgcgat cagaacaatt agtaaaggct agtgaagcag
     4621 aaaataatgc gattttattc aaaccaaagg gtgactccgt tgacaatgac aacttttcac
     4681 ctgatgaggg gaatgtaata ttagtaaata atcagttttg gtcgatttat cacaagcagt
     4741 ttcaacctga tattccaata aaaaatcaaa aaaataatgt cgaagtaatt attccacaaa
     4801 agtttcatgc aatgcgtaat gaaatcaatc aagcatatca ttcatggttt gaatttgtac
     4861 ataataaaaa taataaagag agtaagttat ctatacagtt tatcaacaaa aatgattatc
     4921 gaatttttac atttgatgca cgagatagtc gccatttgtc atttatagag gcgccaatca
     4981 ttgtgaatgt tcaggcatca gatttatcga atgattttta ttatgccatg atcagtcaag
     5041 gcgggtattt attcaaaaat tatgacgcgc tagtaaaaaa ta
//
LOCUS       DAKPJH010000145         5082 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.147, whole genome shotgun sequence.
ACCESSION   DAKPJH010000145 DAKPJH010000000
VERSION     DAKPJH010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5082
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.147"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            18..1094
                     /locus_tag="OY092_002442"
     CDS             18..1094
                     /locus_tag="OY092_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HCX1077358.1"
                     /translation="MTKIFKISFLILLVVIVSSYYGESFVLADNNPIVNSENGSDNNF
                     ESGTIERNQNELYEVGDYSTPLTERVFGKDQRTVVNNILQRPYKQTVLLNMTFSNNRV
                     YKGTGTMIGKDIVLTAAHNVYSKDDKGWAKKIDVYAGVNGQTYTIGKAFSHKFFVSKS
                     WINNAPTKEDIAIIKLNSNLGNKTGYLTLNTRISKGENIEISGFPGDKSDNRQYKGKG
                     KLESFDENEMYYTVDTFSGQSGSAIRDSKNNIIGVHAYGRYNHNSGVRINDLKLDYIN
                     YWIGKYRSHPYNKKVKVIKSKYIYWKNIEITKKGDNKLIKKDKAYTAKLYYNIPNGYK
                     YYSLYDEKNRWMGYFNSNDIKVVK"
     gene            1110..1745
                     /locus_tag="OY092_002443"
     CDS             1110..1745
                     /locus_tag="OY092_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HCX1077359.1"
                     /translation="MKKVISLFVAILSVLIFTDNANAENNKPEGVNENSNLIPVRQPD
                     ANYPGPVSDIARVKKLDNLIDGTKDPDVIKQLKDDNEVPNNAVKAKDSKIVSDCRHLL
                     KHPDNLMDGTKDPNVINQLKNANGTSNNSAVNPSIKANDIHTKSNKQMAKQQSIHLDS
                     KSKSVHKQQLKELPKTGVNNESNTAIMVLFIGLILLVVSLVTRFIKLNSHQ"
     gene            complement(1854..3536)
                     /locus_tag="OY092_002444"
     CDS             complement(1854..3536)
                     /locus_tag="OY092_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HCX1077360.1"
                     /translation="MNQHLLGNPKLTVTHVNEVKAGINHIVVDSVQYGNQEMIMEKDV
                     TVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGAIPTSSF
                     TPEESPDPGFWVPNDYVVVKVALRGSDKSKGVLSPWSKREAEDYYEVIEWAAKQPWSN
                     GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWI
                     QGIFARWTDNPNIEDMIQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASWSTQGLHNR
                     GSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSFFDFYLKEENNDWKDTPHVI
                     YEVRDQFYKGEFKSASAFPLPNTEYTPLYLNAENHTLNHAKISSAHVAQYDSEDKRQD
                     VSFKYTFDKDTELVGNMNLKLWVSTKDSDDMDLFAGIKKLDRRGNEVNFPDFNHIENG
                     QVATGWLRVSHRELDQEKSTIAQPWHKHETELKLSQDEIVPVEIELLPSGTLFKQGET
                     LEVVVKGSEIVIGNSTPGMKTRYEHEETVNKGMHMIYTGGKYDSQLIIPIVN"
     gene            3679..4266
                     /locus_tag="OY092_002445"
     CDS             3679..4266
                     /locus_tag="OY092_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCX1077361.1"
                     /translation="MTIDRRIRKSQVAMRNVFIELLHQHQLEEITVQQIADLADVNRS
                     TFYTHYYDKYDLLEKLENQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIEMIEKD
                     IAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLI
                     RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ"
     gene            complement(4347..4796)
                     /locus_tag="OY092_002446"
     CDS             complement(4347..4796)
                     /locus_tag="OY092_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HCX1077362.1"
                     /translation="MTALFPYIAFKNSKEALAYYEEVFGATDVKRLEVGEEQASHFGM
                     TKEEAQEATMHAEFEVLGVKVLCSDSFGRADKINNGISLLIDYDVNNKEDADKVEAFY
                     EQIKDHSSIEIELPLADQFWGGKMGIFTDKYGVRWMLHGQDYTAIQQ"
BASE COUNT         1768 a          796 c          875 g         1643 t
ORIGIN      
        1 ttaaaggagg aatgcctatg acaaaaattt ttaaaatatc atttttgatt ttgttagtag
       61 taattgtttc tagttattat ggtgaaagtt ttgtcttagc tgataataat cctatcgtca
      121 attcagaaaa tggtagtgat aataattttg aatcaggaac aattgaacgt aatcaaaatg
      181 agctttatga agtaggtgat tatagtacgc ccttaactga gcgagttttc ggtaaagatc
      241 aaagaacggt tgttaataat attttacaaa gaccttataa gcagactgta ttattaaata
      301 tgacgttttc aaataaccgt gtatataaag gcaccggtac tatgattggt aaggacattg
      361 tattgacagc ggctcataat gtctattcta aagacgataa gggttgggct aaaaagattg
      421 atgtctatgc tggagtaaat gggcaaacat atacaatagg aaaggccttt tcgcataagt
      481 tttttgtatc taaatcttgg attaataatg ctcctacaaa agaagatata gcaattatta
      541 agttaaatag taatttagga aataaaacag gttacttaac tttgaacaca cgcattagca
      601 aaggtgaaaa tattgaaatt tctggatttc caggagacaa gtcagacaac agacaatata
      661 aaggtaaagg gaaattagaa agttttgatg agaatgaaat gtattatacg gtagacacat
      721 tttcaggaca aagtggtagt gcgataagag attcaaaaaa caatatcatc ggagtacatg
      781 catacggcag atataatcat aattcaggcg tgagaataaa tgatttaaaa ttagattaca
      841 taaattattg gataggtaag tacagaagtc atccatataa taagaaagtg aaagtaatta
      901 aaagtaagta tatatattgg aaaaacattg aaattacaaa aaagggtgat aataaattaa
      961 ttaaaaaaga taaagcgtac acagctaaac tctattacaa tattccaaat gggtataaat
     1021 attactcttt atacgacgaa aaaaatagat ggatgggtta ctttaatagc aatgatatta
     1081 aggtagtaaa ataggaaagg atgaataaga tgaaaaaagt tataagttta tttgttgcaa
     1141 ttttatcagt gttgattttt acggataatg cgaacgccga aaataacaag cctgaaggtg
     1201 tgaatgaaaa cagcaattta ataccagtta gacaaccgga tgcaaattat ccagggccag
     1261 ttagtgacat agcacgtgtg aaaaaacttg ataatttaat agatggcacg aaagatccag
     1321 atgttatcaa gcagttgaaa gatgataatg aggtgccgaa taatgcggta aaggcaaaag
     1381 attctaaaat agtatccgac tgcagacatt tactaaaaca tccagataat ttaatggatg
     1441 gcacgaaaga tccaaatgtt attaatcagt tgaaaaacgc aaatggaaca tcgaataata
     1501 gtgctgtaaa tccaagtatt aaagcaaatg atattcacac aaaaagtaat aaacaaatgg
     1561 ctaaacaaca aagtattcat ttggatagca agagcaagtc agtacataag caacaattga
     1621 aagaattacc aaaaacagga gtaaataacg aaagtaatac agcaattatg gttttattta
     1681 ttggtttaat attgcttgta gtaagtttag tgacaagatt tataaaatta aatagccatc
     1741 aataataaaa agggccacac cttggtttaa gattccaagc gtgtggcctg ctcttgttat
     1801 acagttctat cactatgtca cttttaatca aaagcgaccg taattgctgc atatcaatta
     1861 acgataggaa tgattaattg tgaatcatat ttaccaccag tataaatcat gtgcatgcct
     1921 ttatttacgg tttcttcatg ttcataacgc gttttcatgc caggggtact attaccaatt
     1981 acaatttcac taccttttac aacaacttcc aatgtttcgc cttgtttaaa tagcgtgcct
     2041 gaaggtaaca attcgatttc aacaggtaca atctcatctt gtgacaactt taattctgtt
     2101 tcatgtttat gccaaggttg cgcaattgtg gatttttctt gatctaattc acgatgtgat
     2161 acgcgtaacc aaccggtagc tacttgacca ttttcaatat gattaaaatc agggaagtta
     2221 acttcattac cacgacgatc taacttttta atacctgcaa ataaatccat atcgtctgag
     2281 tctttagtgc ttacccatag ttttaagttc atgtttccaa ctaactcagt atctttgtca
     2341 aacgtatatt taaaacttac atcttgtcgt ttatcttcag agtcatattg tgcgacatgc
     2401 gcgctactaa tctttgcatg attcaatgtg tgattttcag cattcaaata caatggtgta
     2461 tattctgtgt taggtaaagg gaacgctgac gctgatttga attcgccttt ataaaattga
     2521 tctctaactt cataaatgac atgaggcgta tctttccaat cgttattttc ttctttaagg
     2581 taaaaatcaa agaatgattt ttggcgttcg agattttctc tagcgtagta actttcccac
     2641 tctttacgtc catgcacata tagccatttt tcttcagatg cagcttgttt aaatccttca
     2701 aaagagccac ggttgtgcaa accttgtgta gaccaactag cacatgttag tagaggtgtt
     2761 ttaatttgtg ataatggcac ttgacgctgt ttccaaaaat catcgaacaa agggtgttct
     2821 tgttgtgctt gaatcatgtc ttcgatattt ggattatctg tccatctcgc aaaaatacct
     2881 tgtatccaga aacgataaaa gccagtatcc ggtatacctc cgtgaaaggc tacttctcta
     2941 tacatatcat ttaatccttc ccaaggaatc attgctttta aatgtggtgg atttaatgat
     3001 gcgacccacc attgagtcac cgcaagataa gaaacaccat ttgttccgat atttccatta
     3061 ctccatggct gttttgctgc ccattcaatc acttcgtaat aatcttccgc ttctcttttt
     3121 gaccatggag ataagacgcc ttttgatttg tcactaccgc gtaatgcaac tttaactaca
     3181 acataatcat ttggcaccca aaatcctggg tctggtgatt cttcaggtgt aaaactagat
     3241 gtcggaatgg cgcctaatgt tggccaaagg gcacccatat ttgtgatttt aggcttatta
     3301 tctttaccgt aagtatctgc agacataact acagggaatt tgccatcttt atttggtctg
     3361 aaaatattaa tatataattt ttcgccatcg cgcatttcca cagtgacatc tttttccata
     3421 atcatttctt gatttccata ttgaacactg tcgacaacga tgtggttaat accggctttc
     3481 acttcattga catgagttac agttaatttt ggatttccta gtaaatgttg gttcattgtt
     3541 atcacctttt tctgtttgtt tgtatcacct atattaaaca ggtaaacatt gtgtgccaat
     3601 catcaatgtt ggagatttgt gggataatga acataacgtt tataattgtt aataatcatt
     3661 ggggaggact tgatacaaat gactatagat cgacgtatta gaaaatcaca agttgcaatg
     3721 agaaatgtat ttattgaact tttacatcaa caccaattag aagagattac tgtgcaacaa
     3781 attgcagatt tagctgatgt taaccgtagt acattttata cgcattatta tgataaatat
     3841 gatttgctag aaaaattaga gaatcagcag ttggaggaaa taagagactt cattcatgat
     3901 gagaagttaa atggagcagt taagttatcc acggataata tacatcaaat tatgaccgtt
     3961 ttaatagaaa tgatagaaaa agacatcgca ttttatcaat tgatgtttcg tatgggtaaa
     4021 gattcaaata tccacgaaaa actttatgat ttaattatgt gtcatttaca acgttataaa
     4081 aatgaaaatg atcaaattaa tggtatacca ttttcctatt tcatgagtta tgtttcaggt
     4141 gcgggattgt ctttgataag acattgggta gaagatccaa accgtataga caaagttgac
     4201 ttaataaggc attttaatac gattgtcaat caagggccag caacgataat taaaaatata
     4261 caataaaata aggcaagcca tgaatcgaga gtggcttgcc ttgctaaata acctaagctt
     4321 attaaatgat atctttatca ataacattat tgttggattg cagtatagtc ttgaccatgt
     4381 aacatccaac gaacaccgta tttatcggta aagatgccca ttttgccacc ccagaattgg
     4441 tcagctaacg gtaattctat ttcaattgaa gaatgatctt taatttgctc atagaatgct
     4501 tcaactttat cagcatcttc cttattgtta acatcataat caattaataa tgatatgcca
     4561 ttattaattt tgtcagcgcg accaaaagaa tcagaacata acacttttac gccaagcact
     4621 tcaaactcag catgcatagt tgcttcttgc gcttcttcct tagtcatacc aaaatgtgac
     4681 gcttgttctt cgccaacttc taaacgttta acgtcagttg caccaaatac ttcttcgtaa
     4741 tatgcaaggg cttcttttga atttttaaaa gcgatataag ggaataatgc tgtcatgtaa
     4801 aacacctcaa tgtattattt ttattactaa caccatgtta cattaaaaaa tggcaaaagt
     4861 ataactttta tgatgaattg gagtcaatct tttgtaaaat acacgataaa ttataagatg
     4921 aaattgattt aaatgaagta aacatatata tgacatacaa aaaatgaaaa tgacacagag
     4981 acgtatgtgt tgtttagtgt tttaaaattc aagtttaaaa aatgctttta gatacataag
     5041 ggactttcga aatataaatg cattaaaatg aatttctaac tt
//
LOCUS       DAKPJH010000146         5058 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.148, whole genome shotgun sequence.
ACCESSION   DAKPJH010000146 DAKPJH010000000
VERSION     DAKPJH010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.148"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            47..259
                     /locus_tag="OY092_002447"
     CDS             47..259
                     /locus_tag="OY092_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001035802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077363.1"
                     /translation="MNKKNELDIAFIMSTVLNVLFLVGLTFLVQLENLYILIPYTILG
                     FINAVYLTVRAINITKNRRFCCKVKK"
     gene            complement(294..968)
                     /locus_tag="OY092_002448"
     CDS             complement(294..968)
                     /locus_tag="OY092_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element ISSau6 family transposase"
                     /protein_id="HCX1077364.1"
                     /translation="MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILRERGIYVHH
                     STIYRWVQEYAPILYQIWKKKNKQAYYKWHIDETYIKIKGQWNYLYRAIDADGHTLDI
                     SLRKKRDNHSAYTFIKRLIKQFGKPQMIITNQAPSTKVAMSKVIKDFKLTPNCHCTSK
                     YLNNLIEQDHRHIKVRKISYQSINTAKNTIKGIECIYGLYKKNRRSLQIYGFSPCRVI
                     SIMLAS"
     gene            1063..1440
                     /locus_tag="OY092_002449"
     CDS             1063..1440
                     /locus_tag="OY092_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077365.1"
                     /translation="MDKQVRNTTEIVRLAKQKSQKTREKVDKAISKFSIEGKAINFNS
                     IAKEANVSKSWLYKEHDIRQRIESLRERQITSNVVSKPKKSSRSEEILIKTLKRRVME
                     LKKENKKLQNQIQKLYGDLYNKE"
     gene            1678..2043
                     /locus_tag="OY092_002450"
     CDS             1678..2043
                     /locus_tag="OY092_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCX1077366.1"
                     /translation="MTKDMCEVTYIHEDKVNRAKKDLAKQNPMDVAKVFKALSDDTRV
                     KIAYVLSLEGELCVCDVANIIESSTATASHHLRLLKNLGIAKYRKEGKVVYYSLDDEH
                     VKQLVEKAFLYQREVASIG"
     gene            2036..4216
                     /gene="cadA"
                     /locus_tag="OY092_002451"
     CDS             2036..4216
                     /gene="cadA"
                     /locus_tag="OY092_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000378396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase CadA"
                     /protein_id="HCX1077367.1"
                     /translation="MDSSAKTLTEDKQVYRVEGFSCANCAGKFEKNVKQLAGVQDAKV
                     NFGASKIDVYGNASVQELEKAGAFENLKVFPEKLANSSMQAVKEDTKAPKEEKIPFYK
                     KHSTLLFATLLIAFGYLSHFVNGEDNLVTSMLFVGSIVIGGYSLFKVGFQNLIRFDFD
                     MKTLMTVAVIGAAIIGEWAEASIVVVLFAISEALERFSMDRARQSIRSLMDIAPKEAL
                     VMRNGQEIMIHVDDIAVGDIMIVKPGEKIAMDGIIINGVSAVNQAAITGESVPVAKTV
                     DDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTP
                     IIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALVISTPISIVSAIGNAAKK
                     GVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLNDQVEEKELFSIITALEY
                     RSQHPLASAIMKKAEQDNITYSDVRVEDFTSITGRGIQGNIDGTTYYIGSPRLFKELN
                     VSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETSKNVIQKLHQLGIK
                     QTIMLTGDNQGTAEAIGAHVGVSDIQSELMPQDKLDYIKKMKAEHGNVAMIGDGVNDA
                     PALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRKTLNIIKANITFAI
                     GIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMRVKDK"
     gene            4579..>5058
                     /locus_tag="OY092_002452"
     CDS             4579..>5058
                     /locus_tag="OY092_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077368.1"
                     /translation="MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEF
                     RHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQNQTPSYKTINR
                     FRVNPNTDALIESLFIQFHSQCLKQNLIDDNSIFIDGTKVEANANRYTFVWKKSIQNH
                     "
BASE COUNT         1692 a          789 c          986 g         1591 t
ORIGIN      
        1 tcaataaagc aactatggta aaattttaaa aaaggaggaa tgtattttga ataaaaaaaa
       61 tgagttagat atagctttta ttatgtctac cgttttgaat gttttatttt tagttgggtt
      121 aactttctta gttcaattag aaaatttata tattttaatt ccatatacta ttttgggttt
      181 tataaatgca gtttatctaa ctgttagggc tataaatatt actaaaaata ggaggttctg
      241 ttgcaaagtt aaaaaataag tgtctaacct tatgtttaaa ataatacttc gtattaactg
      301 gctagcatga tgctaattac acggcatggc gaaaacccgt agatctgaag agatctgcgg
      361 ttctttttat atagtccata aatacattca atgcctttga tcgtattctt tgccgtattg
      421 atactttgat aacttatttt ccttactttg atatgacgat gatcttgttc aatgagatta
      481 tttaaatatt tagaggtaca atgacagttg ggggtaagtt taaaatcttt aatcactttg
      541 gacattgcca ccttcgttga aggggcttgg tttgtaatta tcatttgagg tttgccaaat
      601 tgtttaataa gacgtttaat aaacgtatat gctgagtgat tatctcgttt cttacgtaac
      661 gaaatatcta gtgtatggcc atctgcatca atagcgcgat ataaataatt ccattgccct
      721 ttaattttga tatacgtctc atctatatgc catttataat aagcttgctt attctttttc
      781 ttccaaattt gatacaaaat aggagcatat tcctgtaccc atcgataaat tgttgaatga
      841 tgaacataga tgcctcgttc tctcaatatt tcagatatat cacgataact taatgcatat
      901 cttagatagt agccaacggc tacagtaatg acatctttgt caaattgctt atatctgaaa
      961 taattcatcc tctgcacctc atttttgttg actattatac tatatttcta actttgcaac
     1021 agaaccgaac aaatcattgg aagtttgacg gggtaattat caatggataa acaagttaga
     1081 aatacaacag aaattgtacg tttggcgaag cagaaatcac aaaagacaag ggaaaaagta
     1141 gacaaagcga tttctaaatt ttcgattgaa ggtaaagcta ttaattttaa ttcaatagca
     1201 aaggaagcta atgtttctaa atcatggctt tataaggaac acgatattag gcaaagaatc
     1261 gaatcccttc gtgagcgtca aataacatca aatgtagtct caaaacccaa gaaaagttct
     1321 cgttcggagg aaatccttat aaaaacctta aaaagaaggg ttatggaatt aaaaaaagaa
     1381 aataaaaaat tacagaacca aattcaaaaa ttatatggag atctgtataa taaagagtag
     1441 ttttaattat taatctgtag acagattgtg aaaggatgca cttaaactaa cggggcagtt
     1501 atgtttaaga tactttaaaa tttggttaaa atctccgaaa ggattggttt ctaacattag
     1561 aaatcaatcc tttttaatat taattatata tcattcaaac aatcatttga ctatttgttt
     1621 atggtgggat atattataat catcaaacaa acagtcattt gaataaggag gataattatg
     1681 acaaaagata tgtgtgaagt tacctatatt catgaagata aggtaaacag ggctaaaaaa
     1741 gaccttgcta aacagaatcc tatggatgta gcgaaagttt ttaaggctct atcagatgat
     1801 acaagagtta aaattgctta tgttttgtct ttagagggag agttatgtgt ttgtgatgta
     1861 gctaatatca ttgaatcttc aacggctacg gcatcccatc atttaagatt attgaaaaat
     1921 ttaggtatag caaaataccg taaagaagga aaagtagtct attattcact agatgatgag
     1981 catgttaaac agcttgtaga aaaagctttc ttgtatcaaa gggaggttgc tagtattgga
     2041 tagttcagca aaaacattaa cagaagataa acaggtttac cgtgtggagg gtttctcgtg
     2101 tgcgaattgt gctgggaagt ttgaaaaaaa tgtaaaacaa ctagctggag ttcaggatgc
     2161 aaaagtgaac tttggcgctt ccaaaattga tgtatatgga aatgcatcgg ttcaagagct
     2221 tgaaaaagca ggtgctttcg agaatcttaa ggtatttccc gaaaaactag cgaattcatc
     2281 gatgcaagcg gtcaaagaag acactaaggc tcctaaagaa gagaaaatac cgttttataa
     2341 aaaacacagc acattgctgt ttgccacatt actgattgct tttggttacc tttctcactt
     2401 tgtaaatgga gaagataacc ttgtaacttc catgttattt gtaggttcga ttgtaattgg
     2461 cggatattca ctatttaaag ttggttttca aaatttgata cgctttgatt tcgacatgaa
     2521 aaccctgatg accgtagcag ttattggagc tgccatcatt ggtgaatggg cagaggcatc
     2581 cattgttgtc gttctctttg caatcagtga agcacttgaa cgtttttcta tggatagagc
     2641 aagacagtcc attcgttcat tgatggatat tgccccaaaa gaagcacttg ttatgcggaa
     2701 tggtcaggaa ataatgatcc atgtggacga tattgccgtg ggtgatatta tgatcgtcaa
     2761 accaggggag aaaattgcca tggatgggat cattataaat ggtgtgtcgg ctgtcaacca
     2821 ggctgctata acaggagaat ctgtccctgt tgccaaaacg gtagatgatg aagtatttgc
     2881 aggtacgctt aacgaagagg gactacttga agtaaaaatc accaaatacg tagaggatac
     2941 aactatctcc aagattattc atctggttga ggaagcacaa ggggagcgcg ctccagcgca
     3001 agcattcgta gataaatttg cgaaatatta tacgccgatc attatggtta ttgcggcgct
     3061 cgttgcagtc gttccacctt tattctttgg tggaagttgg gatacttggg tttatcaagg
     3121 attagcggta cttgtagttg gatgtccgtg tgcattagtt atttctactc caatctcgat
     3181 tgtctcggca attggaaatg cagctaaaaa aggtgtgttg attaaaggcg gtgtctatct
     3241 agaggaatta ggagccatta aggcaatcgc atttgataaa acaggaacac tgacaaaagg
     3301 tgtaccagtg gtaacagatt ttaaagtgtt aaatgatcaa gtggaagaaa aagagctgtt
     3361 ttccattatt acagctttag aatatcgatc acaacatcca cttgcttcag caataatgaa
     3421 gaaagcagag caagataata ttacttattc cgatgttaga gtggaggact tcacttctat
     3481 tacaggtcgg ggcattcaag ggaatataga tggaacaacc tattacattg gcagtccaag
     3541 gctttttaaa gaattaaatg tttccgattt tagccttgag tttgaaaata aagtgaaagt
     3601 tttacaaaac caagggaaaa cggccatgat tattggaacg gaccaaacaa tcctcggcgt
     3661 gattgctgta gcagatgagg tccgcgaaac aagtaaaaat gtgattcaaa aacttcatca
     3721 gttaggaatc aagcaaacaa ttatgctgac aggtgataat caaggtaccg cagaagcaat
     3781 cggtgctcat gtaggcgttt ctgatattca gtccgaattg atgccacagg ataagttgga
     3841 ctatattaaa aaaatgaaag ccgagcatgg taatgtagct atgattggcg atggcgtcaa
     3901 tgatgctcct gcacttgctg catccactgt tggcattgca atgggcggtg ctggaacaga
     3961 tactgccatc gagacagctg atattgcatt aatgggagat gatttaagta agcttccatt
     4021 tgcagtaaga cttagcagga aaacgctaaa tatcatcaaa gcgaacatca cgtttgccat
     4081 cggaattaag ataattgcct tactattggt tattccaggc tggctaaccc tttggattgc
     4141 gattctttcc gatatgggag ccactatttt ggtagcatta aatagtttgc gactgatgag
     4201 agtgaaggat aaataggtac tatatgtgtg caatttacgg agaggctggg acataaatcc
     4261 ctaaaaagca gcagtaagat aattttcaat tagaaaatat cttactgctg ttctctattt
     4321 atacaatact tcgtattgaa tggcttcgct ttgcccgtct ggcacattac tgtaaaattc
     4381 tataaataga atttttgatg acggatccct tcctagggtg ccgtctcagc cttggtcttc
     4441 gactggcact gctccctcag gagtctcgcc attaatacta cgtattaaca tgtaatttta
     4501 ctttgaaata ctttaaaaaa ataagacact ttcgtataat ttaataaata ccactaaact
     4561 aaattaacga ggtgccttat gtataaaaat tataacatga cccaacttac actaccaata
     4621 gaaacttctg ttagaattcc tcaaaatgat atttcacgat atgttaatga aattgttgaa
     4681 acgatacctg atagcgaatt cgatgaattc agacatcatc gtggcgcaac atcctatcat
     4741 ccaaaaatga tgttaaaaat tatcttatat gcatacactc aatctgtatt ttctggtcgt
     4801 agaatagaga aattacttca tgacagtatt cgaatgatgt ggttagctca aaatcaaaca
     4861 ccttcttata aaactattaa tcgttttaga gtaaatccta atactgatgc attaattgaa
     4921 tctttattta ttcagtttca tagtcaatgt ttaaagcaaa atcttattga tgataattca
     4981 atttttattg atggtacaaa agtagaagct aatgccaata ggtatacatt tgtgtggaag
     5041 aaaagtattc aaaatcac
//
LOCUS       DAKPJH010000147         5054 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.149, whole genome shotgun sequence.
ACCESSION   DAKPJH010000147 DAKPJH010000000
VERSION     DAKPJH010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5054
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.149"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            515..628
                     /locus_tag="OY092_002453"
     CDS             515..628
                     /locus_tag="OY092_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077369.1"
                     /translation="MNGILIKCLNIGGQYYLQTRMLSNVDNAEKTISGNSI"
     gene            1010..1270
                     /locus_tag="OY092_002454"
     CDS             1010..1270
                     /locus_tag="OY092_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077370.1"
                     /translation="MIIMRGYNERYCSWTNTAIQCDYFNKVRQVKKDGKSDRLSNNIN
                     SNIIYRVFEKCIALYNVYSRCKRALILSEHSKKNIFNIKKAV"
     gene            1280..1777
                     /locus_tag="OY092_002455"
     CDS             1280..1777
                     /locus_tag="OY092_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HCX1077371.1"
                     /translation="MNNRNVYDIEVSDYKGLTYKLEAFRGKVILVVNTATECIYSEQL
                     KKLETLFQKYKDRGFVVLSFPNNNFDNRQPGSNEEILKISREKFGVTFPVLAKISVNG
                     NDEHPLFTHLKNEQPGIFGSPIKWNFTKFIIDRQGNVVNRFLPMEDPLDISANIEILL
                     QESSS"
     gene            complement(1885..1973)
                     /locus_tag="OY092_002456"
                     /pseudo
     CDS             complement(1885..1973)
                     /locus_tag="OY092_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2164..4044
                     /locus_tag="OY092_002457"
     CDS             2164..4044
                     /locus_tag="OY092_002457"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HCX1077372.1"
                     /translation="MKLNTSNSPFTEKQVTEINNLLQTLTESQQQWLSGFLLANSSDT
                     TSDSNQQQLETEVWQQSQISEEQATSTTYMLQNKEPHIEANQRHVTVLYGSESGNAMR
                     LAEIFSERLSDIGHQVVLMSMDEYDTTNIAQLEDLFIITSTHGEGEPPDNAWDFFEFL
                     EDDNAPNLNHVRYSVLALGDQTYEFFCQAGKDVDALLENLGAERICKRVDCDIDYEED
                     AEKWMADIINMIDTTSEGIQSESVISESIKSAKEKKYSKSNPYQAEVLANINLNGTDS
                     NKETRHIEFLLDDFSESYEPGDCIVALPQNDPELVEKLISMLGWDPQSPVPINDHGDT
                     VPIVEALTSHFEFTKLTLPLLKNADIYFDNEELSERIQDESWAREYVINRDFIDLITD
                     FPTIELQPENMYQILRKLPPREYSISSSFMATPDEVHITVGTVRYQAHGRERKGVCSV
                     HFAERIKPGDIVPIYLKKNPNFKFPMKQDIPVIMIGPGTGIAPFRAYLQEREELGMTG
                     KTWLFFGDQHRSSDFLYEEEIEEWLENGNLTRVDLAFSRDQEHKEYVQHRIMEESERF
                     NEWIEQGAAIYICGDEKCMAKDVHQAIKDVLVKERHISQDEAETILRQMKQQQRYQRD
                     VY"
     gene            4110..4718
                     /locus_tag="OY092_002458"
     CDS             4110..4718
                     /locus_tag="OY092_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HCX1077373.1"
                     /translation="MNMPLMINLTNKNVVIVGGGVVASRRAQTLSQYVEHMTVISPTI
                     TEKLQNMVDNGVVIWKEKEFEPSDIVDAYLVIAATNEPRVNEAVKQALPEHALFNNVG
                     DASNGNVVFPSALHRDKLTISVSTDGASPKLTKSIMAELEALYPPSYSSYIDFLYTCR
                     QKIKLLDITYNEKQQLLSQIVSQEYLNHDKQAQFLAWLDVRQ"
     gene            4783..4878
                     /locus_tag="OY092_002459"
     CDS             4783..4878
                     /locus_tag="OY092_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077374.1"
                     /translation="MGGFVNSLIMKYLSDNDMRFKYEYYNREKDT"
BASE COUNT         1902 a          691 c          925 g         1536 t
ORIGIN      
        1 atatttttga aatatcaaaa atgtatagct tgtttatata aaatgattta aaatgtttta
       61 taacaacata ttttatgcaa cacataaaat gggtaactaa catcacgaaa tcattgtatt
      121 tattgttgca ctgatgaagc gatgtcacaa agaaatgtcg ttatcaaacg aagcccgaaa
      181 tacatactga tactcgaagt aatgtaacga taaataacaa tgataacgat tgattactac
      241 gcaaaaatat atgtaaattg acgatttaaa tgcaattcgt atattttgcc aatgatttac
      301 acattaaaat gtttgaaaat tgtcataatt cagtctaatt ttaaaggaaa ttaattacaa
      361 aattcaaaaa tcatgcatcg tgtcatttag atattgaaaa agatgagtca aatttgtttc
      421 atatattttc caataacaaa tgattatatc taaatataca atcagaaata tatgaataga
      481 aatatcaata tgaaaaataa tatgattaaa aatgatgaat ggcatactta taaagtgtct
      541 aaatattggt ggtcaatatt acttacaaac acgaatgtta agtaatgtag acaatgctga
      601 aaaaacaata agtggaaact ctatatagaa tgttcgtttt tatttttaat aattgaataa
      661 tcattattga tgatttaata tgtattcggt cgcacacgat acaaagtgac ttgttttaat
      721 gatatgcaat aatatgacgt ttatcgtcgc atgtaacaat gtatgagtgt gtcagtttaa
      781 ttttaaaagg gttataagga tacttaataa gataaaggag ggcttaataa acaatcacat
      841 gtgaagtttt taaggattat atgagttggg cagctcttta atccatagtt ataacgaatt
      901 ttaaattgtt agatttaacg tatggtatca gtatgtatga gtttaactta agtattaatc
      961 tatagtttaa agagcggtct aattgtcttt ttaaaaatag aaaataagga tgattataat
     1021 gaggggttat aacgaaagat attgtagctg gactaataca gctatacaat gtgattattt
     1081 taataaagta agacaggtga aaaaagacgg taaatcggat aggttgagca acaacataaa
     1141 ctcgaacatt atttatcgtg tgtttgaaaa atgtatcgcg ctatataatg tgtattcgcg
     1201 gtgtaaacgc gcacttattt tatcagaaca ttctaaaaag aacatattca atataaaaaa
     1261 ggctgtgtag gggtgtctta tgaataatag aaatgtgtat gatatcgaag taagtgatta
     1321 taaaggctta acttataaat tagaagcatt tagaggtaaa gtgattttag ttgttaatac
     1381 tgcaacagaa tgtatatata gcgaacaatt gaaaaaacta gagactttgt ttcaaaaata
     1441 taaggatcgt gggtttgtag tgttgagttt tccgaataat aattttgaca atcgacaacc
     1501 aggttctaat gaagaaatct tgaaaatcag tcgtgagaaa tttggtgtta catttccagt
     1561 gctagctaaa atatctgtga acgggaacga tgaacatccg ttatttacgc atttaaagaa
     1621 tgaacaacca ggaatctttg ggtccccaat aaaatggaat ttcacaaaat ttataatcga
     1681 tcgacaaggc aatgttgtaa atcgattctt gccaatggaa gatccattgg atatatcggc
     1741 aaatatagaa atattattgc aagaatcttc atcttaaatt taaaattgag cgcttagtat
     1801 gcaaataaca caagagcctc ttaatgatgt actaatagta tgtcattagg aggcatttta
     1861 tatttagaaa atcagtaatt tgacctattt tactgaaagg ctgatttggt acataataaa
     1921 tagtaaataa aaaataacaa cgatgcatta ctgtatgcat taataactga cacgacataa
     1981 tcaaagtttt gtctgaatta ctgtgtcatt caagcaacat gaaggttgta aatatttgta
     2041 agtataacta tcagacacaa ctcaagtttg ttttaattta taccatacat attaaaaaat
     2101 tgactaaact atcgataaaa aatgagtcaa tcatctattt caagtttatt gaggtgaaaa
     2161 tatttgaaat taaatacatc taatagtcca tttacagaaa aacaagttac agagattaac
     2221 aatctgctgc aaacattaac agagagccaa caacaatggc ttagtgggtt tttactagct
     2281 aatagtagcg atacgacaag tgatagtaat caacaacaat tagagacaga agtgtggcaa
     2341 caatcacaaa tatcagaaga acaagcaact tcaacaacgt atatgttaca aaataaagag
     2401 ccacatatcg aagctaatca gcgtcatgtc actgtgctat acggttctga atcaggtaat
     2461 gccatgcgat tggctgaaat attttcagaa cgattaagtg atatcggaca tcaagttgtt
     2521 ttgatgtcaa tggatgaata tgatacgaca aacatcgcac agttagaaga tttatttatt
     2581 attacgtcta ctcatggtga aggagaaccg cccgataatg catgggattt ctttgaattt
     2641 ttagaagacg ataacgcacc taatttaaat catgtgagat attcagtact agctttaggt
     2701 gatcaaacat atgaattttt ctgtcaagcc ggtaaagatg tagatgcttt actagaaaat
     2761 ctaggcgctg agcgtatatg taagcgtgta gattgtgata ttgattatga agaagacgca
     2821 gaaaagtgga tggcagacat cattaatatg attgatacca catcagaagg tattcaaagt
     2881 gaatcggtga taagtgaatc aattaagtct gccaaagaaa agaaatattc taaatcaaat
     2941 ccataccaag cagaagtttt agcgaatatc aatttaaatg gtaccgattc aaataaagaa
     3001 acacgacata tagaattttt acttgatgat tttagtgaat catatgaacc aggagattgt
     3061 atagtagcat taccgcaaaa cgaccctgaa ttggttgaaa aactaatatc catgttaggt
     3121 tgggatccgc aatctccggt gccaattaat gatcatggtg atacagttcc tattgttgaa
     3181 gcactaacat cacattttga atttactaaa ttaacattgc cattattgaa aaatgcagat
     3241 atctattttg acaatgaaga attatctgaa cgtattcaag atgagtcatg ggcgcgtgaa
     3301 tatgttataa atcgggactt tatagattta ataacagatt ttccaactat agaattacaa
     3361 cctgagaata tgtatcaaat ccttagaaaa ttaccaccaa gagagtattc gatttctagt
     3421 agttttatgg caacgccaga tgaagtgcat attaccgttg gtacggttcg ttatcaagca
     3481 catggacgtg agagaaaagg tgtatgctcg gttcattttg ctgagcgtat taaaccaggc
     3541 gatatagtac caatttattt gaagaaaaat ccgaacttca aatttccgat gaagcaagat
     3601 ataccggtta ttatgattgg accaggtact ggaattgctc cttttagagc atatttacaa
     3661 gaacgtgaag aacttggtat gactggaaaa acatggttgt tctttggtga tcaacaccgt
     3721 agttctgact ttttatatga agaagaaata gaagaatggc ttgaaaatgg aaacttaaca
     3781 cgcgtagatt tagcattttc aagagaccaa gaacacaaag aatatgtaca gcatcgtata
     3841 atggaagaaa gtgaacgttt caatgaatgg attgagcaag gcgcagcaat ctatatttgt
     3901 ggcgatgaaa aatgtatggc gaaggatgtc catcaagcca ttaaagatgt attggtaaaa
     3961 gaacgtcata tttctcaaga cgaagctgag acgatattgc gtcaaatgaa acaacaacaa
     4021 cgctatcaac gtgatgttta ttaatgcttc aatgtgttaa atattttaag gtgtaatgat
     4081 gtaaaattat ataaaggatg ttgctcaaca tgaatatgcc attaatgata aatttaacaa
     4141 ataaaaatgt cgtcatagtt ggtggaggcg tcgttgcaag tcgtcgggca caaacattaa
     4201 gtcaatacgt tgaacatatg acggtcatca gtccgacaat cactgaaaaa cttcaaaata
     4261 tggtagataa cggtgtcgtc atatggaaag aaaaagagtt tgaaccaagc gatattgtag
     4321 acgcgtatct agttattgca gcaaccaatg agccacgtgt caatgaagcg gtaaaacaag
     4381 ccttacctga gcatgccctt tttaataatg ttggagatgc atcaaatggc aatgttgtat
     4441 ttccaagtgc actacaccgc gacaagctaa ctatcagtgt atcaactgat ggtgcgagtc
     4501 ctaagttgac aaaatcaatt atggcagagc ttgaggcgtt atatccacca tcatacagtt
     4561 cgtatatcga ctttttatat acttgccgac agaaaataaa gttactagat ataacatata
     4621 acgaaaagca acagttactg tcacaaattg tgtcacaaga atatttaaat catgacaaac
     4681 aagctcaatt tttagcgtgg ttggatgtaa gacaataata gcggaccgtc taaggtaagt
     4741 cttcttattt taactttaac gcttaatcat tgaaattaag acatgggcgg ctttgtgaat
     4801 agtctaataa tgaagtattt aagcgataat gatatgcgtt ttaaatatga atattacaat
     4861 agagaaaaag atacgtagaa caaacttaat aaaatagatg gataaattga aatctggttg
     4921 aagtcgttac tatcatagcg acctttagcc agattttttg tgcaatagaa agcaataata
     4981 aaaatgataa atcaaaatga aatacaggac aggatataca aggattagtc atgccatgtt
     5041 atcaagtagg aaaa
//
LOCUS       DAKPJH010000148         4953 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.150, whole genome shotgun sequence.
ACCESSION   DAKPJH010000148 DAKPJH010000000
VERSION     DAKPJH010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4953
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.150"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..390
                     /locus_tag="OY092_002460"
     CDS             <1..390
                     /locus_tag="OY092_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001827736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077375.1"
                     /translation="VDLSNLEINDIKLNEKFDKKGYEVNKKIKFDRFKFYNSKAHPDL
                     TVKVREKDNIVKGIILVRDEKIHTNFDGGIGSPINNAIENLGFGYKRTKVGNDFSSVK
                     YIDRDNHLKLNLLYQDLEIKRIEFFSK"
     gene            450..1007
                     /locus_tag="OY092_002461"
     CDS             450..1007
                     /locus_tag="OY092_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HCX1077376.1"
                     /translation="MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEE
                     EILKKLKDPQDVAAETKARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSI
                     VGLFVLALFLISLLLLFCPIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKI
                     LEYIYRLILKYLLWYIKTVKGSVRK"
     gene            1004..1846
                     /locus_tag="OY092_002462"
     CDS             1004..1846
                     /locus_tag="OY092_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HCX1077377.1"
                     /translation="MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDA
                     FDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNP
                     FHENKKTLTIEMPDKMIKRLNISSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDAL
                     DSKTNNSSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDA
                     KASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGN
                     IKVE"
     gene            complement(1903..2943)
                     /locus_tag="OY092_002463"
     CDS             complement(1903..2943)
                     /locus_tag="OY092_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HCX1077378.1"
                     /translation="MQQVTSDIMTFRGSHFELGVKTGKWLQQTPLLKNREKEWKKRVP
                     RFDIDVNETYQIFQTYAPQIWEELMGLQSILKMPTRQIILNFGHYRFTDLKESGCTVF
                     QGKDFMVRNYDYHPATYDGRYLLYQPTDSGLAQIGPVSRVTGRMDGMNESGLTMGYNF
                     MHRKKPANGFVCYMIGRLILENCRNVTEAIQLLKEIPHRSSFSYILMDKSLNHAIVEV
                     TPRSIDVRYDNICTNHFEILTHENRNYTKESKERLARTISQTNDNLDMTTAFKLFNNP
                     QYEIYSKLFKSWSGTIHTSMYHPETLTAYFTLGENAPPEIIDFKSWLDGQELNITHFT
                     GNIDTDLTFANK"
     gene            3394..3567
                     /locus_tag="OY092_002464"
     CDS             3394..3567
                     /locus_tag="OY092_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077379.1"
                     /translation="MWNFIKCVFKFVFSLVAITTLVAGVGVVAFAYIFKKDFEDIERK
                     TKEIISDIESKNN"
     gene            complement(3624..3929)
                     /locus_tag="OY092_002465"
                     /pseudo
     CDS             complement(3624..3929)
                     /locus_tag="OY092_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
     gene            4113..>4953
                     /locus_tag="OY092_002466"
     CDS             4113..>4953
                     /locus_tag="OY092_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCX1077380.1"
                     /translation="MKIVEVKSKNGINFMILDGNNEPIVDAVRYLKYLDSVNKSLNTK
                     KTYAYALKKFFVYLESKKICYKEVSFDNFVDFIRWMKTPFEYENVLSYHRKGKSISPK
                     TINLTITVVSNFYDYLYRSKKLDVNFYDFIHTESKYSKKYKSFMHHVNKDYGMLKNIL
                     KVKEPKKKLEVLTNVEVKKLLGAANNIRDKFLIQLLYETGLRIGEVLSLRIDDIKFDF
                     RKGHQIVLKNRFNSNGTYLKTGERKIFISQSLIDLYDDYVYEIIDELSICSDYLFVKI
                     KGRN"
BASE COUNT         1796 a          586 c          842 g         1729 t
ORIGIN      
        1 gtggatttgt ctaatcttga aataaacgat attaaattaa atgagaagtt tgataaaaaa
       61 ggctatgaag taaataaaaa aattaagttt gatcgtttta aattttataa cagtaaagct
      121 caccctgacc ttaccgttaa agtgagagaa aaggataaca tcgttaaggg gataatatta
      181 gtaagagatg aaaagataca tactaatttt gatgggggaa ttggttcgcc gataaataac
      241 gcgattgaaa atcttgggtt cggatataaa agaacaaaag ttggcaatga tttctcatcg
      301 gtaaagtata ttgatagaga taaccattta aaattaaact tactttatca agatttagaa
      361 attaaacgta ttgaattttt tagtaaatag ctttaggtct taaagttata aaaaacgaat
      421 gaataatttt attgggatga gtgacctata tgaacaagat tacttattta aatgaattag
      481 aaacagcact tgatgcgcta cctaggcatt taagagatca aaaaatgtat gaatatgaac
      541 gttattttta tgagcaagaa cttaatggcg ttgatgaaga ggaaatttta aagaagttaa
      601 aagacccaca agatgttgca gctgaaacaa aagctagaag tgttattgat tatgctgaat
      661 ctaaaccaac atttgaaaat atttcaagag ctgttgctgc ttcattaagt ttaggcattc
      721 tatctatttt tgtcatcctt ataccagtat ctatagttgg attatttgta ttagcattat
      781 ttttaatatc acttttgctg ctgttttgtc caattatttt attagcatca gcaatatcca
      841 gaggaattgt agactcaatt agtaatgtat tttttgccat atcatattca ggattaggat
      901 tagtatttat cattgtcata tttaagattt tagaatacat ttatcgttta atcttaaaat
      961 atttactttg gtatattaaa actgtcaaag gaagcgttag aaaatgaaga aattcttttt
     1021 tattgggctt ttagtgtttg ttgtcttttt tacagcagca accattattt ggttcagcta
     1081 tgataaaaac aaatatggta ctaaacaata tgataaaaca ttcaaagacg atgcttttga
     1141 caatgtatct ataaatttgg atagtacaga acttcgtata aaacggggga atcaatttag
     1201 agttaaatat gatggtgaca atgatatatt aattaatata gtagataaga cgttgaagat
     1261 tagtgataaa aggtctaaga caagaggata tgcaattgat atgaatcctt ttcatgagaa
     1321 taagaaaact ttaacgattg aaatgcctga taaaatgatt aaacgtttaa atatatcgtc
     1381 tggagcagga agtgttagaa tcagtgatgt tgatttagag aacacaagta ttcaaagcat
     1441 taacggtgaa gtagttatta aaaactcaaa tcttgacgca ctagattcaa agacaaataa
     1501 tagttctact tatattagta aaagtaacat taaaaatagt aatattaaag ttgttattgg
     1561 tacgctacaa atcgacaaga gtcaaattaa acaatccata tttttaaacg atcatggtga
     1621 cattgaattt aaaaacatgc catcaaaagt agatgcaaaa gcttctacta aacaaggaga
     1681 tattcgtttt aagtatgata gtaaacctga agacactata ctaaagctaa atccgggaac
     1741 gggtgatagc gtagttaaaa ataaaacatt tactaatggt aaagttggga aaagcgacaa
     1801 tgttttagaa ttttatacga ttgatggtaa tatcaaagtt gaataaataa aggatgtaag
     1861 caccgatatt aggaagcata atttctctaa tatcggtgtt atttatttgt tggcaaaagt
     1921 taagtcggta tctatattgc cagtaaagtg agtgatatta agctcttgac catctaacca
     1981 tgatttgaaa tctattattt ctggtggcgc attttctccc aatgtaaaat atgcagttaa
     2041 tgtttcaggg tgatacattg atgtatggat ggtgccagac cagcttttga atagtttact
     2101 gtaaatttca tactgaggat tattgaataa cttaaatgct gtagtcatat ctaaattatc
     2161 attagtttgt gaaatggtac gcgccagtct ttctttagat tcttttgtat aattgcgatt
     2221 ttcatgtgtt aatatttcaa aatgatttgt acatatatta tcataacgaa catctattga
     2281 tctcggcgtc acttcaacaa ttgcatggtt caatgatttg tccatcagta tgtagctaaa
     2341 tgagcttctg tgtggtattt ctttcaataa ttggattgct tctgttacat ttcggcaatt
     2401 ttcaagaatt agacgaccaa tcatataaca tacaaaacca tttgctggtt tcttccggtg
     2461 cataaagtta tagcccatag ttaatcctga ctcattcata ccatccattc ttccagttac
     2521 ccttgataca ggaccaattt gagctaaacc gctatctgta ggttgatata gtaagtagcg
     2581 accatcataa gttgcagggt ggtaatcata atttctaacc atgaagtctt tgccttgaaa
     2641 gaccgtgcaa ccactttctt ttaaatcggt aaaacgataa tgtccaaagt ttaaaataat
     2701 ttggcgtgtt ggcattttga gtatactttg tagtcccatt aattcttccc atatttgagg
     2761 tgcgtaagtt tggaatattt gataagtttc atttacatct atatcgaaac gtgggacacg
     2821 ttttttccat tctttttctc gattttttag aagaggtgtt tgttgaagcc atttaccagt
     2881 tttaacacct aactcgaaat gtgaacctct aaaagtcata atatctgatg tcacttgttg
     2941 catatcatcg gcccctttct ttttagttgt aatatattgt aaataaatag taatcgtatg
     3001 tatattgaat gtcatgttaa ataaagttat attttactaa atgaaatata aaattgtttg
     3061 aggtgatttc tcggtgtata agacttatca atcagttaaa acatattttt atagatggtg
     3121 gggatattaa gttaaaaact taaaatcatc ttatcataaa taacaatctt aagttagcat
     3181 tcacgataat agtcattgtt aacattagca tataaggtca tgtcacgttg aaacagaggt
     3241 tcctcggcat ttttgaaaat aatcattagc ttgctcgcta tataatttga tgaatatatt
     3301 tcgtaaaagt gggtatttat ttaatgatta ttctatatat gatagtataa tgaaatgtag
     3361 ataggtattt aatttaacag aggtgaaatt gagatgtgga attttattaa atgtgtgttt
     3421 aaattcgtat ttagcttagt tgctattaca acattagttg ctggtgttgg tgtagtagca
     3481 tttgcttata tctttaaaaa agattttgaa gatattgaaa gaaaaactaa agaaattatt
     3541 tctgatatcg aaagtaaaaa taactaataa catttaggca aggacaatat agattgttct
     3601 tgcctttaat tatgttcaaa gcattaaggt aacaagacaa tatctaagat atcaaagata
     3661 gaaatttttt gacgttgttg ctgattgtaa acataaccat caatttcata attaatagca
     3721 tcaatacgat aaatggttaa gcgtactgaa tctacaaagc cattattata aaatttaact
     3781 tctacaggtt gggcatattg tagcgcctcg tgtagccgaa tgtttagctc agccaattga
     3841 tcatctgata atacaggacg tgtaattttg ttttggtcga taatgtattg ttgaatcgtt
     3901 tcgaattgtt cgggtaatgt tgcaaaaggt tatatatata ttgaaggata tagactattt
     3961 tgtttaaaat gaatcatatt ttaagaaaaa atgaacaaag taaaaatatt aaatagtctt
     4021 tttttattac gtgtaataag tttaatatgt atgatgtaaa aagagttcga atagtgtata
     4081 cttatactat taaaattaga aatgagatta ttatgaaaat agtagaagta aaatctaaga
     4141 atggtatcaa ttttatgatt ttagatggta ataatgaacc tatagtagat gcagtaagat
     4201 atttgaagta tctggatagt gttaataaaa gtttaaatac caagaaaacc tatgcctatg
     4261 cactaaaaaa attttttgtt tacttagaaa gtaaaaagat atgctataaa gaagttagtt
     4321 ttgataactt tgttgatttt ataagatgga tgaaaacacc ttttgaatat gagaatgtcc
     4381 tctcttatca ccgaaaagga aaaagcatta gtcctaagac aattaatctg actattactg
     4441 tagtatctaa tttttatgat tatctctata ggagcaaaaa attagatgtt aatttctatg
     4501 attttataca tacggaaagt aaatactcta aaaaatataa aagtttcatg catcacgtaa
     4561 acaaggacta tggaatgttg aaaaatattt tgaaagtaaa agaaccaaag aaaaaactag
     4621 aagtgttaac caatgttgag gttaagaaat tattaggagc agctaataat attagagata
     4681 aattcttaat acaattatta tatgaaacag gattacgtat aggtgaggta ttatcattac
     4741 gcattgatga tatcaaattt gattttagaa aaggtcacca aatagttttg aaaaatagat
     4801 ttaatagcaa tggtacttat ttaaaaactg gtgaaagaaa aatatttatt tctcaatcgt
     4861 taattgattt atatgacgat tatgtgtacg aaataattga cgaactttcc atatgttctg
     4921 attatctttt tgtaaaaata aagggtagaa atg
//
LOCUS       DAKPJH010000149         4743 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.151, whole genome shotgun sequence.
ACCESSION   DAKPJH010000149 DAKPJH010000000
VERSION     DAKPJH010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4743
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.151"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..558
                     /locus_tag="OY092_002467"
     CDS             <1..558
                     /locus_tag="OY092_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HCX1077381.1"
                     /translation="KVKPCIAGRPRTKGKVESIMKILDEIHAYQGELYLEEIPKFISN
                     LNERLNYSVHTSTGKIPIIALEKEKSFLQPLPNVNVRNSYKVKHKYLKVNRSNMITYK
                     SNQYSVPAEYCGKIVEVQVYDQKLHVYYNTKSICEHLITQRKLNYQKEHYLETLSSSF
                     GNREMDDINQIAIDNLNAIGELYDE"
     gene            551..1312
                     /gene="istB"
                     /locus_tag="OY092_002468"
     CDS             551..1312
                     /gene="istB"
                     /locus_tag="OY092_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HCX1077382.1"
                     /translation="MNNSTNYKRLKANLEYLKMNQMINHLDDVIDFSIKNNLSFIDTL
                     IKLSDYEIEIKEKNLIESMVKVAAFPFKKEISDFDFNFQPSINQQEIWDFTDLRFIEK
                     YQNIVFLGSSGVGKTHLATGIGMAAAKNRVSTYFIKCHHLIENLRKAKLENRLENRLK
                     HYSKYKLLIIDEIGYLPIGSEDAKLFFQLIDLRYEKKSTIFTTNINFNLWNEIFDDPK
                     IANAILDRILHHSSVVKIKGKSYRLKDHSPKKEIT"
     gene            complement(1340..1495)
                     /locus_tag="OY092_002469"
     CDS             complement(1340..1495)
                     /locus_tag="OY092_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077383.1"
                     /translation="MLYILITALNVILNKLKMKDSNIISFIYSRHDRILYVNLVGCKC
                     QYKNVHK"
     gene            complement(1431..1712)
                     /locus_tag="OY092_002470"
     CDS             complement(1431..1712)
                     /locus_tag="OY092_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCX1077384.1"
                     /translation="MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAE
                     KAFRHEVKNMDDVRMPFSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF"
     gene            2001..2696
                     /locus_tag="OY092_002471"
     CDS             2001..2696
                     /locus_tag="OY092_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCX1077385.1"
                     /translation="MTVLTDKVAVVTGAGSGIGEAIATLLHEEGVKVILAGRNKDKLQ
                     NVANQLAQDSVKVVPTDVTKKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQV
                     DEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAV
                     HTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQDIAEAVLYALTQP
                     KHVNVNEITVRPV"
     gene            2948..3370
                     /locus_tag="OY092_002472"
     CDS             2948..3370
                     /locus_tag="OY092_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HCX1077386.1"
                     /translation="MTKKHVFIIIGVILCICIVATVIYLKVKYDEKEKQKSIYYKEQQ
                     ERITLYLKHNTKEPNTIKSVHFTSLKTGPMGDAVIEGYINENKEDNFVAYGSPEHNYQ
                     FGGSLIKSKNLSTLLKPAHQTKTPDDIKKELDSKKNDR"
     gene            3637..4056
                     /locus_tag="OY092_002473"
     CDS             3637..4056
                     /locus_tag="OY092_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HCX1077387.1"
                     /translation="MSKKKILILTSIMLIILISVASIYFKMKYDEKEKQKSIYYKEQQ
                     ARITLYLKHNTKEPNTIKSVHFTKLETSPMGSAVIEGYINENKKDDFVAYASPENNFQ
                     FVGDLIKSERLSELLKPAHQLKSPDGIKKELNKKKSY"
     gene            4074..4499
                     /locus_tag="OY092_002474"
     CDS             4074..4499
                     /locus_tag="OY092_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000162200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HCX1077388.1"
                     /translation="MSKKHGFIIIGVILCICIVASVIYLKMKYDEKEKQKEIYYKGQQ
                     ERITLYLKHNTKEPNTIKSVHFTSLKRGPMGDAVIEGYINENKEADFVAYGSPEENYQ
                     FTGGLTGSNEVLGKLKNAENLKSPEKIKEEINKKKNTKQ"
BASE COUNT         1835 a          664 c          773 g         1471 t
ORIGIN      
        1 aaagtaaaac cttgtattgc cggccgtcct agaacaaagg gtaaagttga atcgataatg
       61 aaaatattag atgaaattca tgcatatcaa ggcgaattat atttggaaga gattcctaag
      121 tttatttcta atcttaatga gcgactgaac tactcagttc atacgagtac aggtaaaata
      181 cctattattg ctttagaaaa agaaaaaagt ttcttacaac cactaccgaa tgtgaatgta
      241 agaaactcat ataaagtgaa acataaatat ttgaaagtca accgctctaa tatgattaca
      301 tataagtcca atcaatattc agtaccagct gaatattgtg ggaaaatagt tgaagttcaa
      361 gtttatgatc aaaaactaca cgtttattat aacactaaat cgatttgtga acatctcatc
      421 acacaacgta aattaaatta tcaaaaagaa cattatttag aaacactgtc atcttctttt
      481 ggaaatagag aaatggatga tattaatcag attgcgatag ataatttgaa tgcgattgga
      541 gagttgtatg atgaataatt cgacgaatta taagcgctta aaagcgaatt tagaatattt
      601 gaaaatgaat caaatgatta atcatcttga tgatgttatc gattttagta ttaaaaataa
      661 cctgtcattt atagatacac taattaaatt aagtgactac gaaatcgaaa ttaaagagaa
      721 aaatttgatt gaatcgatgg taaaggtggc ggcatttccg tttaaaaaag aaatatcaga
      781 ctttgacttt aattttcaac cgagcatcaa tcaacaagaa atttgggatt ttacagattt
      841 gcgttttata gaaaaatatc aaaacattgt ctttttaggc tcaagtggcg ttggcaaaac
      901 acatttagct acaggcattg gtatggctgc agctaaaaat agagtgagta cttactttat
      961 taaatgtcat catttgatag agaatttaag aaaagcaaaa cttgagaaca gattagaaaa
     1021 tagattgaag cactatagca agtataagtt attaatcata gatgagattg ggtacttacc
     1081 tattggaagt gaagatgcca aactattctt tcaattaata gatttaagat atgagaagaa
     1141 aagtacaata tttaccacaa atatcaattt caacttatgg aatgaaatat ttgatgatcc
     1201 aaaaatcgca aatgcgattt tggataggat attgcatcat tcaagtgtag ttaaaatcaa
     1261 aggcaaatcg tatagattaa aagatcattc acctaagaag gaaattactt agcaaacaat
     1321 tttgtacatt cttatacaat catttatgta catttttata ttgacattta caacctacaa
     1381 gatttacata taaaattcta tcatgtctgc tatatataaa cgaaatgata ttagaatcct
     1441 tcattttcaa cttgtttaaa attacgttta atgccgttat aagaatatac aacattatat
     1501 aattttactt gggcgtcatg gacacttgag aagggcattc ttacatcgtc catattttta
     1561 acttcgtgtc gaaatgcttt ttcagctttt tgtctttctg caagcgacat acttagccat
     1621 tcttctttgc taaataaatc ttcgaatcga aaatcaaatg cggttctttt actttctgct
     1681 cttaatgcta aaacacgctc atgatatgtc acgttttatt cctccctcta atcattcaat
     1741 cgaatgataa atcacagtat taactttagt actaatataa tgtttttaca ataaagaagt
     1801 gacgattttt caacattttt aaaaataaaa aatataagca acgattaatt gtatatttag
     1861 aatggcttgt aatgtaattt atctatgaaa atgaagcgag ttattatgac cgttatatga
     1921 attgtgatac gctttttaaa agtaatatgt atttatgatt taccctgaaa aaataaaaag
     1981 aatcaaagga gtcgatcatt atgacagtat taacagataa agtagcagta gttacaggtg
     2041 caggtagtgg tattggagaa gcaattgcaa cattactaca tgaagagggt gtgaaagtca
     2101 tcttagccgg tagaaataaa gataaactac aaaatgtggc gaatcaatta gctcaagata
     2161 gtgtgaaggt agtgccaaca gatgtaacga aaaaagaaga agtcgatgaa ttgataaaaa
     2221 ttgcacaaca aacattcggt ggtttggata ttgttatcaa tagtgcggga caaatgttat
     2281 cgtctaagat tactgattat caagtagatg agtgggatag tatgattgat gtgaatatca
     2341 aaggcacttt atatacggca caggctgcat taccaactat gttagaacaa tcaagtggtc
     2401 atcttattaa cattgcatct atttctggct ttgaagtaac gaaaagcagt acgatttata
     2461 gtgcgacgaa agcagcagtt cacactatta ctcaaggatt agaaaaagag ttggcaaaga
     2521 caggtgttaa agtaacaagc atttctccag gaatggtaga tacagcaata actgccgcat
     2581 acaatccaac agatcgtaaa aaacttgaac cacaagatat tgcagaagca gtattatatg
     2641 cattaacaca accaaagcac gttaacgtga atgaaattac agtgcgtcct gtataaaaag
     2701 gtgtttgagg tctgggatat aggcatttaa tgtaatagct atcggttttg ttaatattag
     2761 taaggcaata atgatataag ggcatgatag acaattattc cttgtacaat tctcagtaat
     2821 tggtgatttt aacaatcaag tgagtgaagg cgactatatt agtgttatga tttataatct
     2881 ataatgttca taattacaga actataaaaa ctttttcatt tcctaccata ttctaggagt
     2941 tgctttaatg accaaaaaac atgtttttat aattattggt gttattttat gtatatgtat
     3001 agttgctaca gtcatttatt taaaagtgaa atatgacgaa aaagaaaagc aaaaatcaat
     3061 ttattataaa gaacaacaag agcgtattac actctatctc aagcataaca ctaaagaacc
     3121 gaacacgatc aaatctgtgc atttcacaag tttaaagaca ggacctatgg gcgatgccgt
     3181 aattgaaggt tacatcaatg aaaataaaga agataatttt gttgcatatg ggtctccaga
     3241 acataattat caatttggtg gaagtttaat caaaagtaaa aatttaagca cattattaaa
     3301 accagcacat caaaccaaaa cgcctgatga tataaaaaaa gaactagatt ctaaaaagaa
     3361 cgaccgctaa aacaatgcgg tcgttttaat tttgctttca agttaatcat acttacacat
     3421 aaaaatgaaa agttgaattt ttagtacaat tttcactgta tttatctgtt aaccacttca
     3481 taaccgcaat attccgatga tcttaaatga acacttttgg ctgcttttcc ttgacctaga
     3541 ttaaaattat agattttctt tgtaagagtg tgttttgtag tatcataaat atgtaaactg
     3601 tataaaatcc caccacattt taggagctgg tgatagatgt cgaaaaagaa aattttaata
     3661 ttaactagta ttatgttaat catattaatt agtgttgcaa gtatctattt taaaatgaaa
     3721 tatgacgaaa aagaaaaaca aaaatcaata tactataaag aacaacaagc gcgcattaca
     3781 ctttatctca agcataacac taaagaaccg aacacgatta aatctgtgca tttcacaaaa
     3841 ttggaaacaa gtcctatggg aagtgctgtg attgaaggtt acataaatga aaacaaaaaa
     3901 gatgattttg ttgcctatgc atcacctgaa aataactttc aatttgtagg tgatttaatt
     3961 aaaagtgaaa gattaagtga gttactaaaa ccagcgcatc aattaaaatc accagatggt
     4021 ataaaaaaag aactaaataa aaagaagagt tactaaagtt aggagttgct ttaatgtcca
     4081 aaaaacatgg ttttataatt attggtgtca ttttatgtat atgtatagtt gcatccgtca
     4141 tttatttaaa aatgaaatat gacgaaaaag aaaaacaaaa agaaatttat tacaaaggac
     4201 aacaagagcg cattacactt tatctcaagc ataataccaa agaacccaat accatcaaat
     4261 ctgtacattt cacaagttta aaaagaggac ctatgggcga tgcagtaatt gaaggttaca
     4321 tcaatgaaaa taaagaagct gattttgttg catatgggtc acctgaagaa aactatcaat
     4381 tcactggagg attgacagga agtaatgaag tcttaggaaa attaaagaac gctgaaaatt
     4441 taaaatctcc tgaaaaaatt aaagaagaaa taaacaaaaa gaaaaacact aaacagtgat
     4501 tttcacgtaa tatttagctt gatttgtaca tgtttaatat cgtttgctat cgaaggtgtt
     4561 tcgcaattaa tataaatcac ttcatcatca ccaatacttc cccagttttt tacagtacat
     4621 taacacaagc gaaccccatt aatgtaaatg gaataatagt ttggccatta taagaacaat
     4681 atatacctaa taacaatggc gatggcgtga tttattgaca ttatcaaatt ttctcaaatg
     4741 tgt
//
LOCUS       DAKPJH010000150         4694 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.152, whole genome shotgun sequence.
ACCESSION   DAKPJH010000150 DAKPJH010000000
VERSION     DAKPJH010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4694
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.152"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            241..1584
                     /gene="brnQ"
                     /locus_tag="OY092_002475"
     CDS             241..1584
                     /gene="brnQ"
                     /locus_tag="OY092_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HCX1077389.1"
                     /translation="MNKNTWVIGFTLFAMFFGAGNLIFPPNLGLDSGQFFWPAILAFV
                     LTGIGLPLLGVIVGALDKEGYIGALNKISPKFSILFLIIIYLTIGPLFAIPRTASTSF
                     EMTITPIIHSNSSIALFIFTIIYFIVVLYICLNPSKLIDRIGSLLTPLLLITILAMII
                     KGYLDFSGNSAGKGNEALYHSNFSSFAEGFTQGYLTMDAIAAIAFSMIVVNAVKLTGI
                     TKTNQIFKQTLTAGLIAAVALIFIYISLGYIGNHMPVSDMTLDQLKSKDRNIGTYLLT
                     TMASTGFGSFGKYLLGIIVALACLTTACGLIVAVSEYFHRIVPKVSYKAFVLVFILMS
                     FIIANQGLNAVISMSIPVLSIVYPVAITVVLLILIAQFIPTKRITQQIPVIIVFILSI
                     FSVISKLGWLKINFIESLPLRAYSLEWFPVAIIATILGYLVGIFVKQDPIKYQQE"
     gene            complement(1657..2793)
                     /locus_tag="OY092_002476"
     CDS             complement(1657..2793)
                     /locus_tag="OY092_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HCX1077390.1"
                     /translation="MTENKSFKESHPLDDFISDKELSNNTIQKEKLTIEQQKQVDTIS
                     KQINPLDNEGLLAFGSDLQKQMSQFSHQMLDEVQSKDVGPIGDTLSDLMSKLKSVNPN
                     ELNTDKPSMLKRIFSRAKSSINEIFSRMQSVSAQVDRITIQLQKHQTHLTRDIELLDT
                     LYDKNKQYFDDLSLHIIAAQQKKLQLENEKLPQLQQQAQQSTNQMDIQQVADMQQFID
                     RLDKRIYDLQLSRQIALQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTL
                     MRQRNAVATQRAVTDTTNDLLTANAEMLKQNAIETATENERGIVDLDTLKRTQRNIIE
                     TIEETLIIQQHGREERQLAEKELQQLEQDLKSHLVNIKGPNKQS"
     gene            complement(2825..3454)
                     /locus_tag="OY092_002477"
     CDS             complement(2825..3454)
                     /locus_tag="OY092_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HCX1077391.1"
                     /translation="MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIV
                     GFLMTYLPIQKLTSRKYLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDF
                     RQINDIYQISRSIYTTVRQRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINE
                     QQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNKLHQKHHQD"
     gene            complement(3473..3742)
                     /locus_tag="OY092_002478"
     CDS             complement(3473..3742)
                     /locus_tag="OY092_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HCX1077392.1"
                     /translation="MRHIHLQVFGRVQGVGFRYFTQRIAMNYNIVGTVQNVDDYVEIY
                     AQGDDADIERFIQGVIEGASPASNVTSHQLEELELNQKLSDFRSI"
     gene            3905..4213
                     /locus_tag="OY092_002479"
     CDS             3905..4213
                     /locus_tag="OY092_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HCX1077393.1"
                     /translation="MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLI
                     NQCKVQFDNYVTGKYNIYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
                     "
     gene            4384..4584
                     /gene="cspA"
                     /locus_tag="OY092_002480"
     CDS             4384..4584
                     /gene="cspA"
                     /locus_tag="OY092_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspA"
                     /protein_id="HCX1077394.1"
                     /translation="MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQDGYKSLEEG
                     QAVEFEVVEGDRGPQAANVVKL"
BASE COUNT         1464 a          702 c          746 g         1782 t
ORIGIN      
        1 tacttaaatc tttataaata aatttaaaat atgagtttat atgaaattgt gaataaaagt
       61 catcagttac tatttaaaaa gtggatttga agaattttat tttctgacat aatttgattt
      121 aaacaacaca tgtgttttgt ttcagctatg tacaacatat ttcatataga ctctttatta
      181 ttttttgtgc taaaatattt acttgtaaat tatttcgtgt tttaaaaaag gagtaactct
      241 atgaataaaa atacatgggt cattgggttt acgctcttcg ctatgttttt tggcgcaggc
      301 aatctaattt ttcctcctaa tctcggattg gatagtggtc aatttttctg gcccgccatt
      361 ttagcgtttg ttctaactgg gattggttta ccattattag gtgtgattgt aggtgcactt
      421 gataaagaag gatatattgg cgcattaaat aaaatttcac ctaaattttc aatattgttc
      481 ttaatcatca tttatttgac tataggacca cttttcgcaa tacctagaac tgcatctaca
      541 tcttttgaaa tgacaattac accaattata catagcaata gtagtatcgc tttatttata
      601 tttacgatta tctacttcat agtcgttttg tatatttgtt taaatccatc taagttaatc
      661 gatcgtattg gttcattatt aacaccatta ttattgatta ctattttagc gatgattatt
      721 aaaggatact tagactttag cggtaatagt gctggaaagg gcaatgaagc actatatcat
      781 tctaattttt caagttttgc tgaaggcttt acacaaggct atttaacaat ggatgccatt
      841 gcagcaattg ctttttcaat gattgttgtt aatgcagtaa aactaactgg tattactaaa
      901 acaaatcaaa tattcaaaca aactttgact gctggtttaa ttgcagccgt agctttaatt
      961 ttcatatata tttcattagg ttatattggt aatcatatgc cagtaagtga catgacgtta
     1021 gatcaattga aatccaaaga tcgaaacatt gggacatatt tattaacgac aatggcttca
     1081 acaggatttg gttcattcgg aaaatattta ttgggcatca ttgtggcgct ggcatgtcta
     1141 actacagcat gtgggcttat tgttgcagtt tctgaatatt tccatagaat cgtacctaaa
     1201 gtatcataca aagcatttgt attagttttc attttaatga gttttattat tgctaaccaa
     1261 ggtttaaatg ccgttatctc aatgtcaatt cctgtattaa gcattgtata tccagtagca
     1321 ataactgttg tattattaat tttaattgcc caattcatac cgacaaaacg cattacacaa
     1381 caaattccag ttattatcgt atttatattg tcgattttca gtgttattag taagttaggt
     1441 tggctgaaaa ttaactttat agaatcattg cctctaagag cgtattcttt agagtggttc
     1501 ccagtagcaa ttattgcaac gatattaggc tatctagtcg gcatatttgt aaaacaagat
     1561 ccaattaaat atcaacagga ataacgaata atataaaagg aagcatctcc aatttaatcg
     1621 taggatgctt cctttttgtt atatctaatt cgtaatttat gattgtttat tcggtccttt
     1681 gatgttcact aaatgtgact ttaaatcttg ttctaattgt tgtaattctt tttcagctaa
     1741 ttgtcgttct tcgcgaccgt gttgttgaat aattaatgtt tcttcaattg tctcaataat
     1801 gttacgctgt gtacgtttca atgtatcaag atcaacaatg ccacgctcat tttctgttgc
     1861 agtttcaatc gcattttgtt tcaacatttc agcatttgct gttaataaat cattagttgt
     1921 atcagtgaca gctcgttgtg tagcaactgc attacgctgt ctcattaatg taagcgcaat
     1981 ggccatttga tttttccata gtggaatact tgtcaaaatt gaactttgta tcttctcggc
     2041 aagtgcttga ttaacatttt gaatcatacg aatttgtggc gcagtttgca aagctatttg
     2101 tcttgaaagc tgtaagtcat atatgcgttt atctagtcta tctataaatt gctgcatatc
     2161 tgcaacttgt tgaatatcca tttgattagt ggattgctgc gcttgctgtt gcaattgtgg
     2221 tagcttttca ttttctaatt gcaacttttt ttgctgtgca gcaatgatat gcaatgataa
     2281 gtcatcaaag tattgtttgt ttttatcata tagcgtatct aataattcaa tatctcttgt
     2341 taaatgcgtt tgatgtttct gcagttgaat tgttatgcga tcgacttgag cactaactga
     2401 ttgcattctt gaaaagattt cattgataga cgactttgct ctgctaaaaa ttctttttaa
     2461 catagatggt ttatcagtat ttaactcatt tggattaact gactttagtt ttgacattaa
     2521 atctgacaaa gtatctccaa taggaccaac atctttactt tgtacttcat ccaacatttg
     2581 atgtgaaaat tgagacattt gtttctgtaa atcagaacca aacgccaata aaccttcatt
     2641 gtctaaaggg ttaatttgtt tactgattgt gtctacctgt ttttgttgtt caattgttaa
     2701 tttttctttt tgaatagtat tattcgataa ttctttatcg cttataaaat catctagtgg
     2761 atgactttct ttgaaacttt tattttcagt catcaatcat ctctccaata gttgctattt
     2821 tacatcaatc ttgatgatgt ttttgatgta acttatttaa ttccatttca atatctaaac
     2881 gttcataatc atcttcgttg agacgcttta aatcagcgat taatgttcgt ttgacctcat
     2941 ccaaagtaat tcgtgtttgt tctaactttt gctgttcatt aattgatttt ttgggcattt
     3001 ttgctagacg tgtatatgca tcaaccaaat ttaaagcatt atcaatatga gaataaaaaa
     3061 agccttcaac tttataaaat gatgcaggtc tctgtctaac tgtcgtataa atagaacgtg
     3121 aaatttggta tatatcatta atctgcctaa aatctttaat tgatcttata ttgacatacg
     3181 tttttaaaat acctctaagt ttttgatgtg tatgatttaa ctgatttcga atatagcgat
     3241 agtcttttct agtcaaacca atttcgttta aatatttgcg tgaagtgagt ttttgtatcg
     3301 gtaggtatgt cattaaaaag ccaacaatac caatagacat atcaattaaa aaagatacat
     3361 caagtgcaat catcccaaat atgcttgtta aaaacgctac aggaattccc actaacaccc
     3421 caaatatatg agaaatatta tatctcactg tcatcttcct ttatttagca ttttatattg
     3481 atcgaaaatc cgataatttt tgatttagtt ctaactcttc aagttgatgg cttgttacat
     3541 ttgatgctgg tgaggcacct tcaattacac cttgaataaa tctctctata tctgcgtcat
     3601 ccccttgtgc atatatctct acatagtcat ctacattttg aacagtaccg acaatgttat
     3661 agttcattgc aatgcgttgt gtaaaatatc taaatccgac gccttgaacg cgtccgaata
     3721 cttgtaaatg tatatgtctc atttttacca cctcataatg ttattatacg tagttttact
     3781 taaaaaaact aataattact atagttacta ctttgtttgt ttcaagtcgt caaacttgat
     3841 tttcagagga taaaggtata aaaataagta tagagttttt gaagtatgga aggggtcttt
     3901 aataatgtgg acagttacca aaattagagc cgattatgag ggatggtggt tattcagtga
     3961 ctggccagaa aacattgttg aaaaatatca atatcaagat tttgatgaca tgtttaagca
     4021 ctatcaacaa ttgattaatc aatgtaaagt tcagttcgat aattatgtca caggcaaata
     4081 taatatttat gcattttata ataattgtga catgaactat tgcgaagatt gtgaagagga
     4141 tttacaaata ttttatagtt tcattgtttt acaaaataat gaagtatatt ataaactacc
     4201 aataattgat taaatgaata ttttttatta ttgtattgca atttggtaat aactgcacta
     4261 taatacaagt taagcagatg attattccat attgcaaaga atatttgagt gaaatttgca
     4321 tgtatttttt gtaatatgcg aataagcata ttgaatgaat tttagtcttg gaggtttcag
     4381 attatgaaac aaggtacagt taaatggttt aacgctgaaa aaggattcgg ctttatcgaa
     4441 gttgaaggag aaaatgacgt attcgtacat ttttcagcaa ttaaccaaga tggttacaaa
     4501 tcattagaag aaggtcaagc tgttgagttt gaagtagttg aaggcgaccg cggtccacaa
     4561 gccgcaaacg ttgttaaact ataattctta gatttgaatc attgatttta actaacacct
     4621 taccaagaag taaggtgttt ttatatgctt attacaaata cttaacgcga tgagtttctc
     4681 aaccaaattg agaa
//
LOCUS       DAKPJH010000151         4678 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.153, whole genome shotgun sequence.
ACCESSION   DAKPJH010000151 DAKPJH010000000
VERSION     DAKPJH010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.153"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            459..1886
                     /gene="treP"
                     /locus_tag="OY092_002481"
     CDS             459..1886
                     /gene="treP"
                     /locus_tag="OY092_002481"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HCX1077395.1"
                     /translation="MAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKD
                     ALSNNALVKGQFKADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKKAAAQKGNP
                     VQRLIKLLGDIFIPILPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIIN
                     VIASTAFIFLPALIGWSSMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLF
                     GLEIKQLNYQGQVLPVLIAAYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFII
                     IGPVALLIGTGITSGVTFIFQHAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSS
                     LGGTYLWPIVAISNICQGSAAFGAWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFG
                     VNLPLKYPFIAAISTSCVLGAIVGMNNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIA
                     IVVPCILTIVMSHFSKQKAKEIVED"
     gene            1950..3590
                     /gene="treC"
                     /locus_tag="OY092_002482"
     CDS             1950..3590
                     /gene="treC"
                     /locus_tag="OY092_002482"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HCX1077396.1"
                     /translation="MSKEIDWRKSVVYQIYPKSFNDTTGNGIGDINGIIEKLDYIKLL
                     GVDYIWLTPVYESPMNDNGYDISNYLEINEDFGTMDDFEKLIKVAHQKDLKVMLDIVI
                     NHTSTEHEWFKEARKSKDNPYRDYYFFRSSEDGPPTNWHSKFGGNAWKYDSETDEYYL
                     HLFDVSQADLNWDNPEVRQSLYRIVNHWIDFGVDGFRFDVINLISKGEFKDSDKIGKE
                     FYTDGPRVHEFLHELNRQTFGNTDMMTVGEMSSTTIENCIKYTQPERQELNSVFNFHH
                     LKVDYVDGEKWTNAKLDFHKLKEILMQWQRGIYDGGGWNAIFWCNHDQPRVVSRFGDD
                     TSEEMRIQSAKMLAIALHMLQGTLYIYQGEEIGMTDPHFTSIAQYRDVESINAYHQLL
                     SEGHAEADVLAILGQKSRDNSRTPMQWSDDVNAGFTAGKPWIDISENYHQVNVRQALQ
                     NKDSIFYTYQKLIQLRHTHDIITYGDIVPRFMDHDHLFVYERHYKNQQWLVIANFSAS
                     AVDLPEGLAREGRVVIQTGTVENNTISGFGAIVIETNA"
     gene            3615..4343
                     /gene="treR"
                     /locus_tag="OY092_002483"
     CDS             3615..4343
                     /gene="treR"
                     /locus_tag="OY092_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HCX1077397.1"
                     /translation="MAKQKKFMKIYEALKEDILNGQIQYGEQIPSEHDLVQLYQSSRE
                     TVRKALDLLALDGMIQKIHGKGSLVIYQEVTEFPFSELVSFKEMQEEMGVAYLTEVVV
                     NEVVEAHEVPEVQHALNINSSESLIHIVRTRRLNQHVKIVDEDYFLKSIVSDIGNDVA
                     SDSIYDYLEKVLNLNISYSSKSITFEPFDEQAYQLFGDVSVAYSATVRSIVYLENTMP
                     FQYNISKHLANEFKFNDFSRRRTK"
     gene            4405..4674
                     /gene="ffs"
                     /locus_tag="OY092_002484"
     ncRNA           4405..4674
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="OY092_002484"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
BASE COUNT         1469 a          649 c         1041 g         1519 t
ORIGIN      
        1 ttaaatacta tatataatga aggtaagtgc tcaaattttg agtatttacc ttttttattt
       61 gtctttgaat gactcgtaat ttttgataat agaaatgata aggcattgag attggaaggg
      121 catttggctt gtgcaatata catagctaaa tgtctttttt gttttgtgaa atatgatgga
      181 tggcttgtgt ggacaagttt gctatttata gatatgcatt tttcaattta ggagttggcc
      241 atgcatctac actttataat ggtgagagcg tggtgaggta ttgttaataa cgcaattgta
      301 gcgaggagtt attgctacat atgtcgttat ggctcattga ttttctgaaa tggctatccc
      361 agataattgt gacaaaataa aaatatttct ttgaaagcct ttacataact tgtctagaca
      421 agttatactc attttaagac attaagggag tgaaatatat ggctgtaaaa agagaagatg
      481 taaaagccat cgtaaccgct attgggggaa aagaaaatct tgaagctgca acgcattgtg
      541 taacacgatt acgtttagtg ctgaaggatg aaagtaaagt tgataaagac gcattaagta
      601 ataacgcgtt ggtcaagggg cagtttaaag cagaccatca atatcaaatt gtcattggtc
      661 caggaacagt cgatgaagtg tataagcagt ttattgatga aacaggtgct caagaagctt
      721 cgaaagatga agcgaaaaaa gcagctgcac aaaaagggaa tccagtacaa cgtttgatca
      781 aattgttggg ggatattttt ataccaatat tacctgcgat tgtgacagct ggtttgttaa
      841 tgggaatcaa taatttactt acaatgaaag gtttatttgg tccaaaagca cttattgaga
      901 tgtatccaca aattgctgat atttcaaaca tcattaatgt gattgcgagt acggcattta
      961 ttttcttacc agcattaatt ggttggagta gtatgcgtgt atttggtggt agtccgattc
     1021 taggcatagt cttaggtttg attttaatgc atccgcaatt agtatctcag tatgatttgg
     1081 caaaagggaa tattccgacg tggaacttat ttggcttaga gattaagcag ttgaattacc
     1141 aaggtcaagt gttgccagtt ttaattgcag cttatgttct agctaaaatt gaaaaaggat
     1201 taaataaagt cgttcacgat tcgataaaaa tgttggtcgt tggacccgta gcgcttttag
     1261 ttactggatt tttagcattt attatcattg gaccagttgc gttattgatt ggtacaggta
     1321 ttacatctgg tgttacattt atattccaac atgcaggatg gcttggcgga gcaatatatg
     1381 gattgttata tgcaccactt gtaattacag gactacacca tatgttttta gcagtagatt
     1441 tccaattgat gggtagcagc ttaggcggta cgtatttatg gccaattgtt gcgatttcca
     1501 atatttgtca gggctctgca gcatttggag catggtttgt ctataaacgt cgtaaaatgg
     1561 ttaaagaaga aggcttggca ttaacatctt gtatttctgg tatgttaggt gttactgaac
     1621 cagctatgtt tggtgtgaac ttacctctga aatatccatt tatcgctgcg atatcaacgt
     1681 cttgtgtatt gggggcaatc gttggtatga ataacgtact tggaaaagtt ggtgttggtg
     1741 gcgtgccagc attcatttca attcaaaaag aattttggcc agtatatctt attgtgacag
     1801 ctattgctat tgttgtacca tgtatactaa caattgtgat gtctcatttt agtaaacaaa
     1861 aagcgaaaga aattgttgaa gattaataaa ataaaaaagg ggcgttcgtt atttggacgt
     1921 cctttattac gttataaggt ggtaattgtg tgtcgaaaga aatagattgg agaaaatccg
     1981 ttgtatatca aatttatcct aagtcgttta atgatacgac ggggaatggt ataggagata
     2041 tcaacggaat tatagaaaaa ttggattata tcaagttatt gggtgttgat tatatttggt
     2101 taacaccagt gtatgaatca ccgatgaatg ataatggcta tgatatcagc aattatttag
     2161 aaatcaacga agactttgga acgatggatg attttgaaaa gttaatcaaa gttgctcatc
     2221 aaaaagactt gaaagtgatg ttagatattg tcattaatca tacgtcgacg gagcatgaat
     2281 ggtttaaaga agcccgtaaa tctaaagata acccttatag agattattac tttttcagat
     2341 catctgaaga cgggccgcca acaaattggc attctaaatt cggtggtaat gcatggaagt
     2401 atgattctga gacagatgaa tattatttac atttatttga tgtcagtcaa gctgatttaa
     2461 attgggataa tccggaagta cgtcaatcgt tatatcgcat agtcaatcat tggatagact
     2521 tcggcgttga tggttttcga tttgatgtca ttaacttaat ttctaaaggt gaatttaagg
     2581 actctgacaa aataggtaaa gaattttata cggatggtcc tagagtgcat gagtttctgc
     2641 atgaattaaa tcgtcaaacg tttggtaaca ctgacatgat gactgtagga gaaatgtctt
     2701 cgacgacgat tgaaaattgt attaagtata cacagccaga acgccaagaa ttgaatagtg
     2761 tttttaattt tcatcatcta aaggttgatt atgttgatgg tgaaaagtgg acaaatgcga
     2821 agcttgattt tcataagtta aaggaaattc tgatgcaatg gcaacgaggt atttatgacg
     2881 gtggcggatg gaacgcgatt ttctggtgta atcatgatca gccacgggta gtgtctagat
     2941 ttggtgatga tacgtcggaa gagatgagga tacaaagtgc taaaatgtta gctatcgcac
     3001 tgcatatgtt gcaagggacg ctatatattt accaagggga agaaattggt atgacggacc
     3061 cacattttac atcaatagca caatatcgcg atgttgaatc gattaatgcc taccatcagt
     3121 tgttaagtga agggcatgct gaagcggatg tattagcgat tttaggacag aagtcacgag
     3181 acaattcgag aacgcctatg caatggagtg atgatgttaa tgctggattt acagctggta
     3241 agccttggat tgatatttcg gaaaattatc atcaggtcaa cgttagacaa gcacttcaga
     3301 ataaagattc tattttctac acgtatcaaa aattaataca attaagacat acgcatgata
     3361 ttattacgta tggagacatt gtgccacgtt ttatggatca tgatcattta tttgtttatg
     3421 aacgtcatta taagaatcaa caatggctag taattgcgaa tttctcagca tcggctgttg
     3481 atttgccaga aggattggct agagaaggtc gtgttgtgat tcaaacaggc acagtggaaa
     3541 ataatacgat aagcgggttt ggtgcaattg taatcgaaac aaacgcgtaa aataaattga
     3601 gtggatgcgt ttatatggcg aaacaaaaaa agtttatgaa gatttatgag gcgttgaaag
     3661 aagatatatt aaacgggcag attcaatatg gtgaacaaat tccgtctgaa catgatttgg
     3721 tgcaattgta ccagtcatct cgagagaccg tgcgtaaggc attagatttg ttggcattag
     3781 acggcatgat tcaaaagatt catggtaaag ggtcacttgt catttatcag gaggttacag
     3841 agtttccatt ttctgaactt gttagtttta aagaaatgca agaagaaatg ggcgtcgcat
     3901 atttaactga agttgttgtg aatgaggttg ttgaagcgca tgaagttcca gaagttcaac
     3961 atgctttaaa catcaattct agtgaatcac tcattcatat tgttagaact cgtcggctta
     4021 accaacatgt gaagattgtt gatgaagatt attttctaaa gtcgattgtt tcagatatag
     4081 gtaatgatgt tgcgagtgat tctatttatg attatttgga aaaggtatta aatcttaata
     4141 ttagttattc aagtaagtct attacttttg aaccgtttga tgagcaagca tatcaattgt
     4201 ttggtgatgt atcggtggct tattcagcaa cagttcgaag tattgtgtat ttagaaaata
     4261 caatgccgtt tcaatataat atttcaaaac atcttgcaaa tgaatttaaa tttaatgact
     4321 tctcaagacg tcgtacaaag taaacaatga tataaatgat ttatacttgc aattaactat
     4381 taaaatatag taatatatat cttgccgtgc taggtgggga ggtagcggtt ccctgtactc
     4441 gaaatccgct ttatgcgagg cttaattcct ttgttgaggc cgtatttttg cgaagtctgc
     4501 ccaaagcacg tagtgtttga agatttcggt cctatgcaat atgaacccat gaaccatgtc
     4561 aggtcctgac ggaagcagca ttaagtggat catcatatgt gccgtagggt agccgagatt
     4621 tagctaacga ctttggttac gttcgtgaat tacgttcgat gcttaggtgc acggtttt
//
LOCUS       DAKPJH010000152         4661 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.154, whole genome shotgun sequence.
ACCESSION   DAKPJH010000152 DAKPJH010000000
VERSION     DAKPJH010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.154"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            22..1059
                     /locus_tag="OY092_002485"
     CDS             22..1059
                     /locus_tag="OY092_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCX1077398.1"
                     /translation="MKTRCYDGKKWQYEFKYEGKRYRKKGFRTKREANSAGLDKLNEL
                     RSGFNIDNYITLEEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKINR
                     QVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVNYKAGKPTKSE
                     QEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSGARNIKIEHINQVKNTIFI
                     DERKTDTSPRYISIAKSDMKHIMDVISTFAISYDGYIFKEAGSIINLHAINNALKSAC
                     RVNNIPIITSHALRHTHCSYLLAKGVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEE
                     DKKTTKILESM"
     gene            1110..1940
                     /gene="sph"
                     /locus_tag="OY092_002486"
                     /pseudo
     CDS             1110..1940
                     /gene="sph"
                     /locus_tag="OY092_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239616.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
     gene            complement(2178..3194)
                     /gene="lukG"
                     /locus_tag="OY092_002487"
     CDS             complement(2178..3194)
                     /gene="lukG"
                     /locus_tag="OY092_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit G"
                     /protein_id="HCX1077399.1"
                     /translation="MIKQLYKNITICTLALSTTFTVLPATSYAKINSEIKAVSEKNLD
                     GDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGY
                     WNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
                     LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAYLINNMGHDHTRQLTND
                     SDNRTKSEIFSLTRNGNLWAKDNFTPKNKMPVTVSEGFNPEFLAVMSHDKKDEGKSKF
                     VVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHNVKFVKVLND
                     NEKK"
     gene            complement(3216..4268)
                     /gene="lukH"
                     /locus_tag="OY092_002488"
     CDS             complement(3216..4268)
                     /gene="lukH"
                     /locus_tag="OY092_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit H"
                     /protein_id="HCX1077400.1"
                     /translation="MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVD
                     KSQQKEKRNVTNKDKNSTAPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYD
                     KNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNK
                     ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHW
                     SVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLT
                     YLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKEGQRLIVTYEVDWKNKT
                     VKVVDKYSDNKSFREG"
BASE COUNT         1606 a          740 c          668 g         1647 t
ORIGIN      
        1 ccaattttga ggagggaacg catgaaaaca cgttgttacg atggtaaaaa atggcaatat
       61 gaatttaagt atgaaggaaa aagataccgt aagaaaggtt ttagaacaaa gcgtgaagct
      121 aattctgctg gactagacaa gttaaatgag ttaagaagtg gttttaatat agataactat
      181 ataactcttg aagaatactt cgaaaattgg attaaaacgt ataaacaacc tgttgttaaa
      241 gaaaatacct accgtcatta tagaaatgca ttacaacata tacaaaaaca taaaataggt
      301 aaaatggagt tatcaaagat aaatagacaa gtttatcaga aattcataaa cgattattca
      361 aaagaacacg caaaagaaac tataagaaaa acaaacggtg ctattcggtc agctttagat
      421 gacgcattat atgatgggct tatttttaaa aatcccgctt ataaagttaa ttataaagcc
      481 ggaaaaccta cgaagtcaga acaagaaaaa ttcatctcgg taactgaata tgaaatacta
      541 aaagatcacg tcagaaagaa gagaactcgt tcatcattag cgctattcat aatgatttgt
      601 acgggttgtc gtgtcagtgg tgcaagaaat ataaagattg agcatatcaa ccaagtgaaa
      661 aacactatat ttattgacga gcgaaaaacc gatacttccc ctagatatat cagtatcgct
      721 aaatctgata tgaaacacat tatggacgtc ataagtacat ttgcaattag ctatgatggt
      781 tacattttca aagaagccgg atctataatt aaccttcatg ctatcaataa tgctttgaaa
      841 tcagcctgta gagttaataa tataccaatt attacatcgc acgcattaag acacactcat
      901 tgttcttatt tactagcaaa aggtgtatct atacattaca tttctaaaag attaggtcat
      961 aaaaatatag caataactac atccgtgtat tctcatttgt tagaagaaaa atttaatgaa
     1021 gaggacaaaa aaacaactaa aattttagaa agtatgtaat ttagggaccc attagggact
     1081 ccaaacccaa taaatactgt tgttacaagg tttctatgta tccaaactgg gggcaatata
     1141 aacgcgctga tttaatcgga caatcttctt atattaaaaa taatgatgtc gtaatattca
     1201 atgaagcatt tgataatggc gcatcagata aattattaag taatgtaaaa aaagaatatc
     1261 cttatcaaac acctgtactc ggtcgttctc aatcagggtg ggacaaaact gaaggtagct
     1321 actcatcaac tgttgcagaa gatggtggcg tagcgattgt aagtaaatat cctattaaag
     1381 aaaaaatcca gcatgttttc aaaagcggtt gtggattcga taatgatagc aacaaaggct
     1441 ttgtttatac aaaaatagag aaaaacggta agaacgttca cgttatcggt acacatacac
     1501 aatctgaaga ttcacgttgt ggtgctggac atgatagaaa aattagagct gaacaaatga
     1561 aagaaatcag tgactttgtt aaaaagaaaa atatccctaa agatgaaacg gtatatatcg
     1621 gtggcgacct taatgttaat aaaggcactc cagagttcaa agatatgctt aaaaacttga
     1681 atgtaaatga tgttctatat gcaggtcata atagcacatg ggaccctcaa tcaaattcaa
     1741 ttgcgaaata taattaccct aatggtaaac cagaacattt agactatata tttacagata
     1801 aagatcataa acaaccaaaa caattagtca atgaagttgt gactgaaaaa cctaagccat
     1861 gggatgtata tacgttccca tattactacg tttacaatga tttttcagat cattatccaa
     1921 tcaaagccta tagtaaatag tgctcaacta actaataact cgcttcgttc taaaaggtcg
     1981 aagcgagtta tattgttaaa atttgaattg acttacattt taataaaatc atcttaacaa
     2041 ttttaatttt tcattaatac aagtctttac tctacactca aacaagattc atacactgca
     2101 catcataata aatctatcta ctcaaatata aataaaagtt acctactaca ttctatgtag
     2161 caggcaactt ttattactta tttcttttca ttatcattaa gtacttttac aaacttcaca
     2221 ttatgtgtct tccaatcaac ttcatataat gctgataatt tttcttcttt tttatctaca
     2281 tggttttcac cagaccaata gccccagaaa ccatgacgat tccaatctat tttaaactca
     2341 tccattgatc ttttataatg aacaacaaat tttgatttac cttcatcttt tttatcatgt
     2401 gacataacag ctaaaaattc tggattaaac ccttcagaaa cagttacagg catcttattc
     2461 ttaggcgtaa aattatcttt cgcccataaa tttccatttc gtgttaaaga aaagatttca
     2521 cttttagttc tattatcact atcattagtt aattgtctcg tatggtcatg tcccatatta
     2581 tttatcaaat atgcttctac tttccaacct acacctttat gtgacgtaga ttgatcaagt
     2641 aatgtacgat acgatggttg ttgataacta atcgtctctg aataattact ctcttttgta
     2701 atatttccag ttaaccctcc acgattaatc gaaaaatctc cacctgtttt ataaccatac
     2761 gtatatttaa cttctcttga ttcatcctga ttttttggtg caaaatcagt cacatttgta
     2821 ttattgttgt catcaacatt ttgaattgaa actgaataag atccaggcca tcttaatgta
     2881 ctattccaat aaccatttgg gtctagaatt cttaaaccac tacctattgt tcctttcgct
     2941 ttaataaata ctgtttcttt atcataatta ggttcagtta agaagttaaa ttgtaagctt
     3001 tgagtaatat ttttttgact atcacttgtt gtagctgtac gtgtatacat tttagtatca
     3061 ccatcaagat tcttctcaga aacagcttta atttcagaat taatttttgc ataagaagta
     3121 gctggtaata cagtgaaagt agtcgatagt gctaacgtac aaattgtgat atttttatat
     3181 agttgtttaa tcatttgtaa tccttccctt cgattttatc cttctctaaa tgatttatta
     3241 tcagagtatt tatcaacgac tttaactgtt ttatttttcc aatcaacttc ataagtgaca
     3301 attaatcttt gaccttcttt atttttttct aaaattggag gtgcataatg tattccaggt
     3361 ctgtttttca aaatatcttg atttcgtgtg tatgttactt caaattgcgt tttctcattt
     3421 gacttttcat tagataaata agttaaaaat tctggattaa agccacttct tactaatgct
     3481 gggtatctat attttgaagc aaagcttagt tcagggtttt caacagtagc aattctcgta
     3541 tttctataga ataataattc atcatttcta tttttcactt ctccaccata cttcaagtca
     3601 ttcgcaataa ctgaccagtg tacatgccag ttattatttt taccgctggc aattgtgtca
     3661 taattttgct gattataact aatcgttttg gagtagctat ttgatgaagt tcgtccaata
     3721 cctttcgttg aatcgaattt accacctgag ctatatgaaa atgtactgtc tactttcgca
     3781 gttgaaattt tatttttcgg caattggtct aatatttcag ttttaggatt tctttttact
     3841 tgaaaatcta catggtactc acttggatac tttaaccaat ttgaattttt ttcttcttta
     3901 tgagattcaa actttaaatt tgaatgaatt gagccttgtt ttttaacaag taatacattc
     3961 ttgtcataag ttggatcatc gataaagtcg aattgtaaat tttggagtat atttgttttc
     4021 tcatcatata ctgtttcagt tcgttttgtg attttaccgt ttttcccaat atcatccggt
     4081 gctgttgaat ttttatcttt attagtaaca ttacgtttct ctttttgttg agacttatca
     4141 acatgttctt tcttattttg gtcttgcgag tctttatgag ctgaatttgc ttgagtcgtt
     4201 gctgctgata acaataaaat tgcacatgat aatgatgacg ctattaaaac acgtttttta
     4261 tttttcattg ttataacctt ctttcgtatg attgatattt gttgatatgt atcgacatgt
     4321 gaataatatc acaaaaacag agaatatata tttaactatt tattaaatga ttttgttaat
     4381 attattaaat actttatcct ctttaaaaat aatgtgtgta caaagtcatt aatttagcaa
     4441 atatttttat ttagtagtta ataaccatcg atttgaaatt tatatataat tattagctaa
     4501 ataatatcct gcatctttct catacaattt actataaaat taagcatatc cgatatcagc
     4561 gttaataaga tcgttgatac tagacagtta atttcataga acgaaatcaa ataacacact
     4621 actttctgca ttttaaatta tgtttaagaa taaaaattat g
//
LOCUS       DAKPJH010000153         4570 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.155, whole genome shotgun sequence.
ACCESSION   DAKPJH010000153 DAKPJH010000000
VERSION     DAKPJH010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4570
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.155"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(278..985)
                     /locus_tag="OY092_002489"
     CDS             complement(278..985)
                     /locus_tag="OY092_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000667076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077401.1"
                     /translation="MKFDLIISNIMIGILVICSAFALMFVFYIQRKLTPEQYFSFSEF
                     FLIGRGLTIKKILNRMILIASFNCILFLILKNFFEIELVCSVCILSTLLGSILIIYPA
                     FKIRHDLPNNEMKSLLNYMYVSFVFLALIISTLTVFTLVVLFDDISIVTLWQEHKSGI
                     ILYLLLVIPSLFFNPTNYEKKMEYAIEKHRESNREINETIIKNNNETIIPDESKSSSP
                     FKIKKVFRLLNRIMKDD"
     gene            complement(1098..4226)
                     /locus_tag="OY092_002490"
     CDS             complement(1098..4226)
                     /locus_tag="OY092_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000009763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HCX1077402.1"
                     /translation="MIFQFSEDDLEQVALKWFEGLGYSVKNGRDSSDNGIMNERESDK
                     DVVLDDRLEAALRRINPELNNSAIEQAIHEISIEKSPSLLENNRSFHEMITNGIEVEH
                     YNDDGETINDLVYVLDFDNPGNNDFLAVNQLTVVNGDYKKRPDIVLFINGLPVVVIEL
                     KNSTNESVGIEDGYHQLETYKMRIPQLFNHNAVLVTSDGVNTKAGSLTADYDRFMTWR
                     TKDGKTEDSSTFRSLDILIHGMLNKEVLLDLIRHFVLFQDDGKGNIVKILAAYHQYYA
                     VNKAVDRAMEATSEHGDGKGGVIWHTQGSGKSLTMVFFSGKLIQKLNNPTLVVVTDRN
                     DLDNQLYGTFVKSKGRSGKGLLRQTPKQAESRKELKELLSVESGGIVFTTMQKFEPEE
                     GQVTMDALTERKNVVVMADEAHRTQYGFKATYNEKGEGIKYGYAKYLRDALPNASFVG
                     FTGTPVSSTDKNTQMVFGNYIDVYDMTQSVEDGSTVKIYYESRIIPLNLPTDLDIDDA
                     YDVITFGQEEDTKSRLKSKWSRIEALSGAEKRVHALATEIINHFETRQKAMNGKGMIV
                     TMSRRIAVDLYDEIIRLKPEWHSDDDDKGVIKVVMTGSSSDPQNFQKHIGPKKRRNLL
                     ENRMKDINDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKP
                     GGLIVDYVGIAESLKEALKEYTDSDREQTGIDTDKALELMLVKYDIIQDMLYNHDYSD
                     FESEDQLNRYNAISNTMDYIIGLGEKERERFVTTVTELSKAFALCATEEAAQELNSEI
                     AFLKAVKSGLVKLLAPPNEGSKLKKTPAEIEAEINQLISKSVVTEEVVDIYQTLGIEN
                     PDISILSDDFLKDVEGLQQKNVAVELLNKLLKGQVKSLMKTNTTVSKRFSEMLSKSIQ
                     KYNNRSIEASKVIEELIQMAKEINQEKERGKELGLSTEEIAFYDALASHETAKEAMDD
                     KELRAIAHELTKTVKNNMSVDWSKRESAKAKMRVQVRRLLKKYGYPPDIQKMAVEQVV
                     EQAELMASQQYK"
     gene            complement(4210..>4570)
                     /locus_tag="OY092_002491"
     CDS             complement(4210..>4570)
                     /locus_tag="OY092_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCX1077403.1"
                     /translation="QRFSTRTWPSDNTFVITSDFESIIYQVLKSIDYISLNRGSTQPL
                     LSQKDIKNTKVVMPTNATLLSKYQKKNNHILKMMDQKIIENKKLTQLRDTLLPKLMSG
                     EIEIPDDIEVNEDDLSI"
BASE COUNT         1416 a          855 c          566 g         1733 t
ORIGIN      
        1 taatttatct agtgactcta aatataaatt attagacaca caaaaacttt ttttaacttg
       61 aaatggacct atagaaaagt ctttttttat acaatatttt tgaaaatact ttactaatat
      121 atactccgct atctttataa tatttgaacc tctatgcatg ttctcaatac aataaatata
      181 acttaacata tcaaagttat cattaaaatt catttttaaa tgtaaaattt cgcatttatt
      241 attttcaaat aaatgtataa ttttcttcaa ataatattca atcatctttc ataatcctat
      301 tcaacaatct aaaaactttt ttaattttga atggtgaaga acttttcgac tcgtctggta
      361 taattgtttc attattattt tttattatcg tctcatttat ctctctatta ctctcacgat
      421 gtttttcaat ggcatattcc attttctttt cataatttgt aggattaaaa aatagactag
      481 gtatcaccaa tagaagatat aaaattattc cacttttatg ctcttgccaa agtgttacta
      541 tactaatatc atcaaataat actactaaag taaatacagt aagagtagaa ataataagcg
      601 ctaaaaaaac aaaagataca tacatatagt tcaacaaact tttcatctca ttgttaggta
      661 aatcatgcct aattttaaac gccggataaa taattaaaat cgaacccaac aatgtactta
      721 gtatacacac actacatact aattcaattt caaaaaaatt cttaagtatt aaaaacaaaa
      781 tacagttaaa actagcaatc aatatcattc tattcaaaat tttcttgata gttaaacctc
      841 ttcctattaa aaagaattct gaaaaagaaa agtattgttc cggcgttaac tttctttgaa
      901 tataaaagac aaacattaag gcaaatgcag aacaaatcac taatatccct atcataatat
      961 tacttataat taagtcgaat ttcatatcaa tctccttttc tctatagtct accggtatat
     1021 tgacactttt ttatatactc tgtcttaaat gtttaatttt aaaaaagtat ctaacaggtc
     1081 aacaatataa acagtattta tttatattgt tgacttgcca ttaattctgc ttgttccact
     1141 acttgttcta ctgccatttt ttgtatgtct ggtggataac catatttctt taatagtcgt
     1201 cttacttgga ctctcatttt agcctttgcg ctctcacgtt ttgaccagtc tacgctcata
     1261 ttattcttaa ccgtttttgt taattcatgt gcaatagccc ttaattcttt atcatccatc
     1321 gcttcttttg ctgtttcatg tgaagctaat gcgtcataaa atgcaatttc ttcagtactt
     1381 aaacctaatt cttttcctct ttctttttct tgatttattt ctttcgccat ttgaattaat
     1441 tcttctatga cttttgatgc ttcgatagaa cggttattat atttttgtat tgatttactt
     1501 agcatctcag aaaacctttt agatacagta gtattagttt tcattaatga cttaacttgt
     1561 cctttgagta atttgttcaa caattcaact gcaacatttt tttgctgtag tccttctaca
     1621 tcttttaaga aatcatccga caatattgag atatctggat tttcaattcc gagtgtttga
     1681 taaatatcta caacttcttc agttacaact gactttgaaa tcaattgatt tatttctgct
     1741 tctatttcag caggtgtctt tttaagcttg cttccttcat taggtggagc taataattta
     1801 acaagtcctg attttactgc ttttaaaaac gcaatttcac tatttagttc ttgagcagct
     1861 tcctctgttg cacataatgc aaaagcctta gaaagttctg taactgttgt cacaaatcgc
     1921 tctctttctt tctcacctaa tccaatgata taatccatcg tatttgagat agcattatag
     1981 cgatttaatt gatcttctga ctcaaagtca gaatagtcat ggttatatag catatcttga
     2041 atgatatcgt atttcactaa cattagttct agcgctttat ctgtatctat acctgtttgt
     2101 tctctatcag agtccgtata ctcttttagt gcttccttca ggctttcagc aatacctaca
     2161 tagtcaacaa ttaagccacc tggtttatct ttaaatactc tattaacacg tgcaatagct
     2221 tgcattaaat tatgaccttt catcggttta tctatgtaca ttgtatgcat tgaaggtaca
     2281 tcaaatcctg ttaaccacat gtctcgcaca attacgagtt gcagttcatc attaatatct
     2341 ttcatacgat tctctaaaag gtttcttctc tttttcggac ctatatgttt ttggaagttt
     2401 tgcggatcac ttgatgaacc tgtcataacg actttaatta cacctttgtc gtcatcatca
     2461 gaatgccatt caggtttaag tcttataatt tcatcatata aatcaactgc aatacgacga
     2521 ctcattgtga caatcatacc tttaccgttc attgccttct gtcttgtttc aaagtgatta
     2581 ataatttcag tcgctaaagc atgtactcgt ttttctgcac cagatagagc ttctatacgt
     2641 gaccatttag atttcaatcg agatttagta tcttcttctt ggccaaaagt aatgacatca
     2701 tatgcatcat caatatctaa atcagttggt aaatttaatg gaataatacg actttcatag
     2761 tatattttaa ccgtactacc gtcttctaca gactgtgtca tatcatatac atcaatataa
     2821 ttaccaaata ccatttgcgt attcttatct gtcgaagata caggtgttcc agtaaaacca
     2881 acgaacgaag cgttaggtaa agcgtctctt aaatattttg cataaccata ttttatacct
     2941 tcaccttttt cattgtaagt tgctttaaaa ccatattgtg tgcggtgtgc ttcgtctgcc
     3001 ataactacta catttttacg ttctgttaaa gcatccattg tcacttgacc ttcttcaggt
     3061 tcgaatttct gcatagttgt aaatacaata ccacctgatt ctacagataa tagttctttc
     3121 aattcttttc gtgattctgc ttgtttaggt gtttgtctta gtaatccttt acctgagcgt
     3181 cctttggact taacaaaagt accatataat tgattgtcta agtcattacg gtctgttacg
     3241 accactaatg ttggattatt taatttttga attaactttc ctgagaagaa gaccattgtc
     3301 aaactcttac cagaaccttg tgtgtgccaa ataacgccgc ccttaccatc accatgttca
     3361 gatgttgctt ccatagcacg atcaacagct ttattaaccg cataatattg atgatatgca
     3421 gctaatattt taactatatt tcctttacca tcatcttgga acaaaacaaa atgacgaatt
     3481 aaatctaata gtacctcttt atttaacata ccgtgaatca atatatctaa actacgaaac
     3541 gttgatgaat cttcagtttt tccatcttta gtacgccaag tcataaaacg gtcataatca
     3601 gcagttaaag aaccagcttt tgtattgaca ccatcactcg ttactaatac tgcattatga
     3661 ttaaataatt gtggaattct cattttataa gtttctaact gatgataccc gtcttcaata
     3721 ccaacagatt catttgtaga atttttcagt tcaattacca ctactggtaa tccatttatg
     3781 aataacacaa tatcaggtct ttttttataa tctccattta caacagttaa ttgattaacc
     3841 gctaagaaat cattatttcc tgggttatca aagtcaagca catagaccaa atcattaatc
     3901 gtctcaccat catcattata gtgttcaacc tcgataccat tagtaatcat ttcatggaaa
     3961 gaacgattat tctctaataa actaggagac ttctcaatag aaatttcatg aattgcctgt
     4021 tcaattgcac tattgtttag ttcaggatta atgcgtctca aagctgcttc caaacgatca
     4081 tcaagcacaa catctttgtc gctctcccgt tcattcataa tcccattgtc actactatct
     4141 cgaccattct taacagaata gccaagaccc tcaaaccact tcagtgcaac ctgttctaaa
     4201 tcatcttcac taaattgaaa gatcatcttc attcacctcg atgtcatcag gtatctcaat
     4261 ttcacctgac attaattttg gtaataatgt gtcacggagt tgggttaatt tcttgttttc
     4321 tatgattttt tgatccatca tttttaaaat atgattgttt ttcttttgat attttgaaag
     4381 caaagttgca ttggtgggca ttactacttt agtattctta atatcttttt gagataatag
     4441 aggttgtgta gaacctctat tcaatgatat atagtctata cttttaagta cttgatatat
     4501 aatgctttca aaatcacttg ttattacaaa agtattatct gatggccatg ttcttgtaga
     4561 aaacctttgg
//
LOCUS       DAKPJH010000154         4563 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.156, whole genome shotgun sequence.
ACCESSION   DAKPJH010000154 DAKPJH010000000
VERSION     DAKPJH010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4563
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.156"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(245..4372)
                     /gene="sdrD"
                     /locus_tag="OY092_002492"
     CDS             complement(245..4372)
                     /gene="sdrD"
                     /locus_tag="OY092_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin SdrD"
                     /protein_id="HCX1077404.1"
                     /translation="MLNRENKTAITRKGMVSNRLNKFSIRKYTVGTASILVGTTLIFG
                     LGNQEAKAAESTNKELNEATTSASDNQSSDKVDMQQLNQEDNTKNDNQKEMVSSQGNE
                     TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNTKQTISNQEALQPDL
                     QENKSVVNVQPTNEENKKVDAKTESTTLNVKSDAIKSNDETLVDNNSNSNNENNADII
                     LPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTTLTVVDADKNNKIVPAQDYLA
                     LKSQIKVDDKVKSGDYFTIKYSDTVQVYGLNPEDIKNIGDIKDPNNGETIATAKHDTA
                     NNLITYTFTDYVDRFNSVQMGINYSIYMDADTIPVSKNDVEFNVTIGNTTTKTTANIQ
                     YPDYVSRDNNSIGSAFTETVSHAGNAEDPGYYIQTVYVNPSEKTLTNAKLKVEAYHKD
                     YPDNVGQINKNVTKIKIYQAPKDYVLNKGYDVNTNQLIDVTEQFKDKITYGTNDSVNV
                     DFGSINNSYVVMVDTKFEFTTSESPTLVQMATLTSDGNRSVSTGNALGFTNNQSGGAG
                     QEVYKIGNYVWEDTNKNGIQELGEVGVKGVTVVAYDNKTNKKVGRTITDEKGGYLIPN
                     LPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSADLGIYKPKY
                     NLGDYVWEDTNKNGIQDQDEKGISGVTVTLKDENGNVLKTVTTDADGKYKFTDLGNGN
                     YKVEFTTPEGYTPTTVTSGSDIEKDSNGLTTTGVINGADNMTLDSGFYKTPKYNLGNY
                     VWEDTNKDGKQDSTEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEF
                     ETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDKDNDTIDSGFYKPTYNLGDYVWEDTN
                     KNGVQDKDEKGISGVTVTLKDENDKVLKTVTTDENGKYQFTDLNNGTYKVEFETPSGY
                     TPTSVTSGNDTEKDSNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQ
                     DSTEKGIKDVKVTLLNEKGEVIGTTTTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGT
                     NTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEDTSDSDSDSDSDSESDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDAGKHT
                     PVKPMSTTKDHHNKAKALPETGNENSGSNNATLFGGLFAALGSLLLFGRRKKQNK"
BASE COUNT         1216 a          805 c          674 g         1868 t
ORIGIN      
        1 aataaattaa ttctagtaat ttttaattat tcgtttgttt tttatatcaa ttgttttaaa
       61 tggtttgata ctgtgtttaa ttgcttttat tattcgtttg tacttttaat gtaaagatga
      121 attaaattta tgttgattta tgttatattt tttaaaaaaa tgcactattt aatctcaaac
      181 ataagataca tttcataaat tttgaaataa aaaaccaggc ctcacggacc tggtataagc
      241 tgtattattt attttgtttt ttacgacgac cgaataacaa taatgatcct aatgctgcga
      301 ataatccgcc aaataacgtt gcgttatttg agccgctatt ttcattacct gtttctggta
      361 atgcttttgc tttattgtga tggtctttag tagtactcat tggtttaaca ggtgtgtgct
      421 tacctgcatc tgagtctgaa tcactgtctg aatctgagtc gctatctgag tctgagtcgc
      481 tatctgaatc tgaatcactg tctgagtctg agtcgctgtc cgaatctgag tcgctgtctg
      541 aatctgaatc gctatctgag tctgagtctg aatcgctatc tgaatctgag tctgaatcgc
      601 tatctgaatc tgagtcgctg tctgaatctg aatcactgtc tgaatctgaa tcgctgtctg
      661 aatctgagtc gctatctgag tctgagtcgc tatctgagtc tgaatcgctg tctgagtctg
      721 agtcgctatc tgagtctgaa tcgctgtccg aatctgagtc gctatctgag tctgagtcgc
      781 tgtctgaatc tgaatcgctg tctgagtctg aatcgctatc tgaatctgaa tcgctatctg
      841 agtctgagtc gctatccgaa tctgaatcgc tgtctgagtc cgaatcgcta tctgaatctg
      901 agtcgctgtc tgaatctgag tcgctatctg aatctgagtc gctgtctgag tctgagtcgc
      961 tatctgattc tgaatcgcta tctgaatctg agtcgctatc tgatgtatct tcttcgaagt
     1021 atccgttatc aagtgtgaaa tcatcatgat ccgtaattgt tacgtcaact tcgccaccat
     1081 ctgcatcttt atcatcttca gttgtatttg tacctgtttg tgttaagcca gcaggctttt
     1141 caaaaataac tttgtattta ccgctatcta aattatcgaa acgatattta ccattttcat
     1201 ctgttgtagt tgttccaatt acttcgcctt tttcatttaa taaagtaact ttaacatctt
     1261 tgataccttt ttcagttgaa tcttgtttgc cgtctttatt actgtcgtac caaacataat
     1321 cacctaaact atattttggt gttttataga aaccactgtc taatgtcatg ttatctgcat
     1381 ctttaatgac acctgttgtt gttaaaccat tagaatcttt ttcagtatca tttccagaag
     1441 ttactgaagt tggtgtataa cctgatggtg tctcgaattc aactttataa gttccattgt
     1501 ttaaatcagt gaattgatat ttaccatttt catctgttgt aactgttttt aaaactttgt
     1561 cgttttcatc ttttaacgta actgttacac ctgaaatacc cttttcatct ttatcttgaa
     1621 caccgttttt atttgtatct tcccatacat agtcacctaa gttgtaagtc ggtttgtaga
     1681 aaccagagtc aatagtatcg ttatctttat ctttaatgac acctgttgtt gatgtaccat
     1741 ttgaatctat accttcatca gttcctgaac ctacttgtgt tggtgtgtaa cctgatggtg
     1801 tttcgaattc aactttataa gttccatttt ctaatccagt aaattgatat ttaccatctt
     1861 tatctgtttt agttgtttgt aaaacttcac cgttttcatt tttcaatgta actgttacgc
     1921 ctgaaatacc tttttcagtt gaatcctgct taccatcttt atttgtatct tcccatacat
     1981 aattacctaa attatatttt ggtgttttgt aaaatccact atctaatgtc atgttatcag
     2041 caccattaat aacacctgtt gttgttaaac cattagagtc tttttcaatg tcgctaccag
     2101 atgttactgt agtcggtgta tagccttctg gtgtagtaaa ttcaacttta taattaccat
     2161 tacctaaatc agtaaattta tatttgccat cagcgtctgt tgtaactgtt tttaacacgt
     2221 taccgttttc atcttttaat gttaccgtta cgccagatat acctttttca tcttgatctt
     2281 gaataccatt tttatttgta tcttcccata catagtcacc taagttgtat ttaggtttgt
     2341 aaatacctaa gtctgcagat aagttatctt tgccattaac tgtaataact gaagataagc
     2401 cgtttgaatc taattcttcg ttattacctt gttttgaagg ggttacttca taaccttttg
     2461 gtaagtttga aaattctaca cggtaatctc cattaggtaa gtttggaatc aagtaccctc
     2521 ctttttcatc agtaatcgtt cttccaactt ttttattagt tttattgtca tatgcaacca
     2581 ctgttacacc ttttactcca acttccccta attcttgaat accattttta tttgtatctt
     2641 cccaaacgta gttaccaatt ttatagactt cttgaccagc accaccactt tggttattag
     2701 taaatcctaa agcattgcca gtagaaacgg atctgtttcc atcagaagtc aaagttgcca
     2761 tttgaacaag tgttggactt tcactagttg taaattcaaa ttttgtatcc accataacta
     2821 cataagaatt gttaatgcta ccaaaatcaa catttacact gtcattagtt ccgtatgtaa
     2881 tcttatcttt aaattgttca gtcacatcta taagttgatt tgtattaaca tcataacctt
     2941 tgtttaaaac atagtctttt ggtgcttgat aaattttaat tttagttaca tttttattta
     3001 tttgacctac attgtcagga taatccttat gataagcttc aacttttaat ttagcatttg
     3061 ttaaagtttt ttccgatgga tttacataaa cagtctgtat atagtaaccc gggtcttctg
     3121 cattacctgc atgtgaaaca gtttcagtaa atgctgaacc tatagaatta ttatctctag
     3181 aaacataatc tggatattga atgttagcag ttgtttttgt tgtagtatta cctatcgtaa
     3241 cattaaactc aacatcgttt ttactaacag gaattgtatc agcatccata taaattgaat
     3301 aattaattcc catttgtaca gaattaaatc tatctacata atctgtaaat gtatatgtaa
     3361 ttaaattatt tgcagtatca tgttttgcag tcgcaattgt ttcaccatta tttggatctt
     3421 taatatctcc aatattttta atatcttccg gattcaatcc atatacttgt actgtatctg
     3481 agtattttat tgtgaaataa tcacctgatt taactttgtc atcaacttta atttgtgatt
     3541 ttaatgctag ataatcttgt gctggtacga ttttattgtt tttatctgca tcaacgacag
     3601 ttaatgttgt atttgatgtg attaaatcat taacattttt agcctctgtt gatgatggct
     3661 gtactgctgc tatacgcatt cttgtattca aacgtttagg tgctgtactt tttggcaaaa
     3721 tgatatctgc attattttca ttatttgaat tactattgtt atcaacaaga gtttcatcat
     3781 tactcttgat agcatcactt ttaacattta atgtagttga ttcagttttg gcatctacct
     3841 ttttgttttc ctcattagtt ggttgaacat ttaccactga tttattctct tgcaaatcag
     3901 gttgtaacgc ttcttgatta cttatagttt gtttagtgtt taaatcttca ttcgtagatt
     3961 ttggtgaagc ttgctcatct gatttggcag ttgaaacttc aactttattt ccagtggtag
     4021 attgtacact ttctttttct attaatttat tcccatttga agtcgtttca ttaccttgag
     4081 atgataccat ttctttttga ttatcatttt tagtattgtc ttcttgattt agttgctgca
     4141 tatcaacttt atcactcgat tgattatcac ttgctgaagt tgtcgcttcg ttcaattctt
     4201 tattagtact ttctgcagcc tttgcttctt ggttccccag accaaaaatt aatgttgtac
     4261 ctactaaaat tgatgctgtt cccactgtgt actttctaat cgaaaattta tttaatcgat
     4321 tggataccat gccttttctt gttattgccg ttttattttc tctgtttagc attagattac
     4381 tcctaattca tcaaattttt aaataataca attgttttaa atacaaaaat gtatatcaat
     4441 atagtattac atttttagat aaagcacaat actttaatta tttttcttta tcgtaaaacg
     4501 ttatttaaca ttcgtgttta aatgaaaatt tttatgagtt ttgtaatctt tatttaatta
     4561 tca
//
LOCUS       DAKPJH010000155         4433 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.157, whole genome shotgun sequence.
ACCESSION   DAKPJH010000155 DAKPJH010000000
VERSION     DAKPJH010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.157"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..332)
                     /gene="deoC"
                     /locus_tag="OY092_002493"
     CDS             complement(<1..332)
                     /gene="deoC"
                     /locus_tag="OY092_002493"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HCX1077405.1"
                     /translation="MKFEKYIDHTLLKSESTRTQIDQIIDEAKAYNFKSVCVNPTHVK
                     YVAERLADSEVLVCTVIGFPLGASTTATKTFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEA"
     gene            complement(413..1765)
                     /gene="tet(38)"
                     /locus_tag="OY092_002494"
     CDS             complement(413..1765)
                     /gene="tet(38)"
                     /locus_tag="OY092_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HCX1077406.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK
                     "
     gene            complement(1772..2479)
                     /gene="deoD"
                     /locus_tag="OY092_002495"
     CDS             complement(1772..2479)
                     /gene="deoD"
                     /locus_tag="OY092_002495"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCX1077407.1"
                     /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNT
                     VRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENID
                     LYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSD
                     IFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPE
                     ERERAFTDMIEIALSLV"
     gene            2715..3470
                     /locus_tag="OY092_002496"
     CDS             2715..3470
                     /locus_tag="OY092_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1077408.1"
                     /translation="MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCAR
                     FDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLDRV
                     SMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
                     TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPHFKNHSHVFDGDTHCWLIIET
                     LYAQTPYPIMINKWYIPQEISELTLTRIRQSDY"
     gene            complement(3813..4412)
                     /locus_tag="OY092_002497"
     CDS             complement(3813..4412)
                     /locus_tag="OY092_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HCX1077409.1"
                     /translation="MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE
                     GTELEHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDI
                     KAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLF
                     DVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK"
BASE COUNT         1476 a          809 c          677 g         1471 t
ORIGIN      
        1 gcttcaatgt cttgttgtac atcatcaaaa cgcccatctt ttaatgcgcc gatgttgatg
       61 accatgtcaa tttcatctgc accattttga attgcatctt ctgtttcaaa tgttttcgtt
      121 gcagttgtcg acgcacctaa tgggaatcct attaccgtac aaactagcac ctctgaatca
      181 gctagtcgct ctgctacata tttaacatgc gttggattca cacatacaga tttaaaattg
      241 tatgctttcg cttcatcgat gatttgatcg atttgcgtac gtgttgactc agacttcaat
      301 aaagtgtgat ctatatattt ctcaaatttc atacttacta ctcctcgtgt tatataatct
      361 ctttatttaa ttttactata aatacgaata tatctcgcga atttatatct atttattttt
      421 cagattgtgt ccaacgattt aagatgacga ataaaactaa tccgacaata ctcattaaac
      481 ctaaaataat taaaataata ccgaaatgtg aacttaatgc atcattgcct gggaaattta
      541 atgctttaaa atcgattaga gccgcagcaa tcgcaatacc tacagatacc gccacattaa
      601 taattaaatt ataaaaacca atagccacac ctgtcatatt aagatctatt gttttaatgg
      661 cttcgttaag taaaggtgca tacattaaag caaagctacc tgcaaagaat atcatagaaa
      721 tgacgaagat tgaaatgtga ttacctactg caaatgcagg taaaattaag ctcagtgcga
      781 ttaaaataat tgctgtgata atcgcttgtt ttgaattaag atattcgccg attttaccac
      841 ttagtgcacc aacgatgact gctacaatat aacccggtac taataacagt gatgttgtgt
      901 ctagttgaag atgataaatt tgttccatta tgaatgggaa cgtaaaaata taacccaatt
      961 ggatagcata cattacgaat actataaata aaaatgaagc ataacgttta ttttggaaaa
     1021 atgatttgtt tactaatgga cgttgcgcat ttttaatata tagcgcaaaa acgataatcg
     1081 caattaaagc accaatcata tataaccaat taaagttcgt aataaacagc atgactgttg
     1141 tagcaatagt tgccactaga attaagccaa caaaatctaa atgagcttta tttgtattat
     1201 tttcttttgg taataattta aataggaatg gcaacgtaaa tactacgatt aatgcaatta
     1261 aaaacatatt tgtccagtgt aaatacgtag aaataaatcc acctgataat gtaccgataa
     1321 ctaatgacaa ggaataactg ctcgtactta agccaaggta agtcttctgg tcctctttag
     1381 aaagatactt tgcaacatat atcacatata atgtctctgc agcagctaaa cctgcagttt
     1441 gaataatacg tccaactaaa agtaatgcga attgatgttg gaaaatgtaa ccaataattg
     1501 atccgataat gattaatatc acgccataaa taaatagtgt gcgtatacta atggcatcag
     1561 ataatgaagc gtatactaca gcgccaatac caattactaa accggctaat gtcgcttgcc
     1621 aacttactgt agttacagaa atgtttaagt catcagcaat ggctacagaa atcaatttga
     1681 atgagttgtc tataaccaaa ctgaatacaa ataagaataa taaaataggt actgctttct
     1741 ttattttaga atattcaaca ttcataatca tctacaccaa tgacagtgca atttcaatca
     1801 tatctgtaaa tgcacgttcc ctttcctcag gtgttgttga cgtttcatga attaaatgat
     1861 cgctcactgt gaacacacct aatgcttcga caccagcgta aattgcattc atgtataatg
     1921 cagctgattc catttctaca cctaaaatac ccatacgcat ccaacgttca ctcgctgttg
     1981 tatccgcgtt atagaaaata tcacttgata acacattacc tacatgatga cgtacacctt
     2041 tgtcacgtgc tgtttcaact gctttttcta ataactgata agaagcaatt ggcgcaaaat
     2101 gacctggtaa ttgatattgt tgaacgtaat ttgaatcagt agaggcacct tgtgcaataa
     2161 tcacatcata taaatcaatg ttttcttgca tcgcgccaca agaaccaacg cgaattaatt
     2221 ttttacaacc aaatgtatga attaattcat aagagtaaat gccaatagat ggcataccca
     2281 tacctgaacc catgacagaa acttttttac ctttatatgt tccggtaaaa ccaaacatgt
     2341 ttcgcactgt attgaactgt tccacatcgt ccaaatatgt ttctgcaatg aacttagctc
     2401 ttaacggatc tcctggcaat agcaccgttt ctgcaatttc gacgtcattc attggcttaa
     2461 tgtgtggtgt tgatttcata aaatattcct cccaatattt gtatagtgat ttgtctattt
     2521 gtctaaccat gtatataata atatttttta aaagcgcttt caagcattac attttgacaa
     2581 tattaagaac attttacagt tatagcttct aaccttgtat aaaactaatt ttcaaagcct
     2641 atctatgttt aatttttata atttttccaa ttcgagtaaa aattattgta tgatgagagt
     2701 gattaagtaa ctttatggag gttgtctacg tgacgcaaac acaaccaaaa tttttaacga
     2761 tttataatac gttatataaa gaaattcaaa taggaaaata tccgagtggc catgcattac
     2821 ctactgaaaa ggaactttgt gcgcgctttg atgtcagtcg tatgactttg cgccaagcta
     2881 taaaattgtt ggccgaagat ggcatcgtag agagtacaag agggaaggga cacttcgtta
     2941 ttccacaaac aaatgcccaa cacgcttcaa gtatggatca atttaagcat ccacttgatc
     3001 aaatattgct agatcgtgta tctatgtcat caattaatta tcgtgttgat ttagaaagtg
     3061 aatatacaaa tcatttgttt gcaaaccatc cttctgccgt cattgcaatg gaacgctatt
     3121 atcaaaaaaa ggacaatcat tctaagcaag ctgatgcatt ttgttttacc tttataccgt
     3181 taaatgtcat tgacacattt aaagtgaata cacaaaacga agacgacatg aagacgttcg
     3241 ttgagcagac gatttatagc aatgcatatc aatcagattt aaaaatgtct attaccaaag
     3301 cgccccactt caaaaatcat agtcacgtgt ttgatggtga tacacattgt tggctgatta
     3361 ttgaaacatt gtacgcacaa acaccttatc caattatgat taataagtgg tatattccac
     3421 aggaaatatc tgaattaaca ctgacacgta taagacaatc ggattattaa aattattaaa
     3481 ataaaaaatc atgtgatgac tgtttagcta ttgtttaatc gacaataact ttcaggtaat
     3541 cacatgattt tttctacttt aaaacgtatg atgtttattt atttgttgaa cgttgtctaa
     3601 ataattttgt tattcgatgt gcgctcttct cgaaacattg agttcacaag cacagagaac
     3661 acaagtaaag tattcatcat tgtaaatgat tgtactgttt tacctacatt tgattctcca
     3721 acccattata caaaaagcaa attgattacc tcatacatac aaaaaaggtg aaacaccttg
     3781 tagatgctcc acctcaatta tattaagtta tattattttg ctgcttggta taattcatca
     3841 acttttttcc agttaacaat attccaaaat gcagtcatat agtctggacg tttattttga
     3901 tatttcagat agtaggcatg ctcccaaaca tcaaatagta agattggtgt tttgccttct
     3961 gttaatggat tatcttggtt tggcgttgtc acaatttcta attttccatc attaacaact
     4021 aaccaagtcc aacctgatcc aaataatgtt gttgctttat ttgcaaattc atttttaaat
     4081 tcatctaaag tgccccactg cgctttaatg tcgtctatta cgccaccttt ttcttcagaa
     4141 ttaggtgata gtatttccca gaataatgaa tggttaaaat gaccaccgcc attattacgg
     4201 actgacatcc tcatcgcttc cggtaccttg tctaagttag caatcatatc cgctagtgat
     4261 tgatgctcta actctgttcc ttcaactgtt gcgtttaatt tcgtcacgta cgtattgtga
     4321 tgtttgtcgt gatgaaactc cattgttctt tgatctatat atggttccaa tgcatcatat
     4381 gcatatggta aatttggtaa tttaaatgcc ataagtatat tcctcctttt atg
//
LOCUS       DAKPJH010000156         4393 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.158, whole genome shotgun sequence.
ACCESSION   DAKPJH010000156 DAKPJH010000000
VERSION     DAKPJH010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4393
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.158"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            95..1096
                     /gene="argF"
                     /locus_tag="OY092_002498"
     CDS             95..1096
                     /gene="argF"
                     /locus_tag="OY092_002498"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCX1077410.1"
                     /translation="MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLK
                     NKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYD
                     GIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
                     VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDI
                     DQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPS
                     FHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF"
     gene            1119..2051
                     /gene="arcC"
                     /locus_tag="OY092_002499"
     CDS             1119..2051
                     /gene="arcC"
                     /locus_tag="OY092_002499"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCX1077411.1"
                     /translation="MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVIS
                     HGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDK
                     QVVTLVTQVEVNENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVP
                     SPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLG
                     ANIQCDQLIILTAIDYVYINFNTENQQPLETTNVDELKRYIDENQFAKGSMLPKIEAA
                     ISFIENNPKGSVLITSLNELDAALEGKVGTVIKK"
     gene            2222..3778
                     /locus_tag="OY092_002500"
     CDS             2222..3778
                     /locus_tag="OY092_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HCX1077412.1"
                     /translation="MENTINESEKKKRFKLKMPGAFMILFILTVVAVIATWVIPAGAY
                     SKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTY
                     ERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKT
                     KGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASS
                     VGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKKDPK
                     ASYSYEDKDAFEQQWSVLKDDDSAHFTLRKKIILTLFVLPFPIMVWGVMTQGWWFPVM
                     ASAFLIFAIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEG
                     MISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTV
                     GIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGG
                     VLITQVLIYS"
     gene            4085..4312
                     /locus_tag="OY092_002501"
     CDS             4085..4312
                     /locus_tag="OY092_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077413.1"
                     /translation="MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWKLRWYLLENI
                     PHLPIILFILMFIFGVPSEMIKDRQRKNNGV"
BASE COUNT         1508 a          596 c          854 g         1435 t
ORIGIN      
        1 attgattaaa tattacaaat tttaatagta ggttgtgttt attttgtatg cgcttacaat
       61 ttaggtgtaa ctaatataaa aggagttgtt attaatgaaa aatttacgaa acagaagttt
      121 tttaacttta ttagactttt cacgacaaga ggtagaattc ttattaacac tctccgagga
      181 tttaaaacgt gctaaatata ttggcactga aaagcctatg ttaaaaaata aaaatattgc
      241 actgttattt gaaaaagatt ctacaagaac acgatgtgca tttgaagttg cagcacatga
      301 tcaaggtgca aatgtaactt atttaggccc aactggatca caaatgggta aaaaagaaac
      361 aactaaagat actgcacgtg tgcttggtgg aatgtatgat ggcattgaat accgtggttt
      421 ttcacaaaga acagtagaaa ctttagctga atattcaggc gtaccagtgt ggaatggttt
      481 aactgatgaa gatcatccta ctcaagttct tgctgatttc ttaacagcaa aagaagtctt
      541 aaaaaaagat tatgcagata ttaactttac atatgttgga gatggtcgta ataacgttgc
      601 aaatgcatta atgcaaggtg ctgccattat gggtatgaac ttccatttag tttgtccaaa
      661 agaattaaat ccaacagatg aattattaaa tcgctgtaaa aatattgccg ctgaaaatgg
      721 tggcaacata ttaatcacag atgatattga ccaaggtgta aaaggttcgg atgtaattta
      781 cactgatgtt tgggtatcaa tgggtgaacc tgatgaagta tggaaagaac gacttgaatt
      841 attgaaacca tatcaagtaa ataaagaaat gatggataaa actggtaatc caaatgttat
      901 ttttgagcat tgcttaccat ctttccataa tgctgatacg aaaattggtc aacaaatttt
      961 tgaaaaatat ggaattcgag aaatggaagt tacagatgaa gtattcgaaa gtaaagcttc
     1021 agttgtattc caagaagctg agaacagaat gcatacaatc aaagcagtca tggttgctac
     1081 attgggtgaa ttttaaatga tataaggaag tgaatatgat ggcgaaaata gtagtagcat
     1141 taggtggtaa tgctttagga aaatcacctc aagaacaact cgagcttgtt aaaaatactg
     1201 cgaaatcatt agtaggatta ataacaaaag gacatgagat tgttattagt catggtaatg
     1261 ggccacaggt tggaagcatt aatttgggac ttaactatgc tgcagaacac aaccaaggtc
     1321 cggcatttcc atttgctgaa tgtggcgcaa tgagtcaagc ttacataggc tatcaattac
     1381 aagaaagctt acaaaacgaa ttgcattcta ttggaatgga taaacaagtg gtaacactag
     1441 tgacacaagt tgaagttaat gaaaatgatc cggcatttaa caatccttca aaaccaattg
     1501 ggttatttta caacaaagaa gaagctgaac aaattcaaaa agaaaaagga tttatatttg
     1561 ttgaagatgc tggaagagga tatagacgtg ttgttccttc accacaaccc atctctatta
     1621 ttgaattaga gagtattaaa acacttatta aaaatgatac actcgttatt gctgctggtg
     1681 gtggagggat accagtaatt agagagcaac atgatggttt taaaggtatt gatgcagtta
     1741 tagacaaaga taaaacaagt gcgttgttgg gtgctaatat tcaatgcgat caattgatta
     1801 ttttaacagc aattgattat gtatatatta attttaacac tgaaaaccaa cagcctttgg
     1861 aaacaacaaa tgttgatgaa ttaaaacgat atatagacga aaatcaattt gcaaaaggaa
     1921 gtatgttacc aaaaattgaa gcagccatat catttattga aaacaatcca aaaggaagtg
     1981 tgcttataac atcattaaat gaattagatg ctgccttaga gggtaaagta ggtactgtga
     2041 ttaaaaagta attgaattga aacgcttttc aattactata tgtcaaatgc atgattttta
     2101 ttatttatgt gcacccctga aaataatgcc tctattttga tgcggggtgc actttcttaa
     2161 tttatattta taaaatcttt aaggtagaaa tgctaggtta aatgtcgaag gagatgaaac
     2221 cgtggaaaat acaattaatg aaagtgaaaa gaaaaaacga tttaaattaa aaatgccagg
     2281 tgcatttatg attttattca ttttaacggt tgttgcagtt atagcaacat gggttattcc
     2341 tgctggtgca tattctaaac tttcttacga accttcatcc caagaactaa agatagttaa
     2401 ccctcataac caagtgaaaa aggttccggg tacgcaacag gaactagaca aaatgggggt
     2461 taaaattaag attgaacaat ttaaatcagg tgcaattaat aagccggtat caattccgaa
     2521 tacttatgaa agattaaagc aacatccagc tggaccagaa caaataacaa gtagcatggt
     2581 tgaaggtacg atagaagcgg tcgatatcat ggtattcatt cttgtactag ggggacttat
     2641 tggcgtagtt caagccagtg gttcttttga atcgggattg ttagctttaa cgaagaaaac
     2701 aaaagggcat gaatttatgc taattgtgtt tgtatcaata ctaatgatta tcggcgggac
     2761 attatgtggt attgaagaag aagctgtagc attctatccg attttagtcc ctatatttat
     2821 agcgttagga tacgattcta tcgtttcagt tggtgccata ttccttgcca gctctgtcgg
     2881 tagtacattt tcaactatta acccgttctc ggttgtaatt gcctctaatg ccgctggtac
     2941 aacttttacg gatggcttgt attggagaat aggcgcttgt attgtcggtg cgatttttgt
     3001 tattagttat ttatattggt actgtaaaaa aattaaaaaa gatcctaaag cgtcatattc
     3061 ttatgaagac aaagatgctt ttgaacagca atggtctgta ttaaaagatg acgatagtgc
     3121 ccattttact ttgcgtaaga agataatcct tacattattt gtactaccat ttccaattat
     3181 ggtatgggga gttatgacgc aaggttggtg gttcccagtt atggcttcag catttttaat
     3241 atttgcaatt ataataatgt ttattgctgg gacaggtaaa tctggattgg gagaaaaagg
     3301 aactgtagat gcatttgtca atggcgcatc aagtttagta ggtgtatctt taattattgg
     3361 cttagctcga ggtattaatt tagtgttgaa tgaaggtatg atttcagata caatcttaca
     3421 cttttcatca tctttagttc aacatatgag tggaccatta tttatcatcg tattactatt
     3481 tattttcttc tgtttaggtt ttatcgtgcc atcatcttct ggattagcgg tattatcaat
     3541 gcctatcttt gcaccactag ctgatacagt aggtatacca agattcgtca tcgttacgac
     3601 atatcaattt ggtcaatatg cgatgttatt cttagcgccg actggacttg ttatggccac
     3661 actacaaatg ttaaacatgc gatattcaca ttggttccga tttgtatggc cggtagttgc
     3721 ttttgtattg attttcggtg gcggagtact aattacgcaa gtactaattt attcataatt
     3781 tgaaatgcta tattataaaa atactaattg ggttttatgc atctcgtagg tttgtagaaa
     3841 tactaaacta agcgaggtgc attattattt ttgattaaga aaataatgac ggtaatcata
     3901 acactagtaa gtaattgata caatgctcta tttaataatg atatttttaa aatttgtttt
     3961 taatgtaatg ttagatctat ggtatattat atttatcgtg gtaaatatgt atttgctgta
     4021 aacagttttt gtaacacatg acacatatgg ttgtgaaaat agcatatata aaggatggct
     4081 ataaatgaca catttgacaa aggttttaga tacactaact ggaatatgcg tagtattatt
     4141 atttagtaaa tattttgtgg cgtatgcaaa tatggtgttt gattggaagt taagatggta
     4201 tttgctagaa aacataccac atttgccaat tatattattt attctgatgt ttattttcgg
     4261 agtaccttct gaaatgataa aagataggca aaggaaaaat aacggcgttt aatttatcga
     4321 tatttagagg tgataaaatt tgtcaactat tacaaagact aaaataaaaa tctttattaa
     4381 ttattttatt ggt
//
LOCUS       DAKPJH010000157         4369 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.159, whole genome shotgun sequence.
ACCESSION   DAKPJH010000157 DAKPJH010000000
VERSION     DAKPJH010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4369
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.159"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(273..656)
                     /locus_tag="OY092_002502"
     CDS             complement(273..656)
                     /locus_tag="OY092_002502"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015901315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HCX1077414.1"
                     /translation="MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKV
                     AIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHA
                     PKVAVMNEDNVIIEMIHEKENTIVL"
     gene            complement(658..1509)
                     /locus_tag="OY092_002503"
     CDS             complement(658..1509)
                     /locus_tag="OY092_002503"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HCX1077415.1"
                     /translation="MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRE
                     SVSTNDITVVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPG
                     ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQ
                     MVKDFNHAVEIIGIDIVREADGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGE
                     RQSKVIIDRVTEYLESHISGRIEEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLID
                     NIIIGAE"
     gene            complement(1502..2320)
                     /gene="panB"
                     /locus_tag="OY092_002504"
     CDS             complement(1502..2320)
                     /gene="panB"
                     /locus_tag="OY092_002504"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HCX1077416.1"
                     /translation="MKTVSQLIDMKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDS
                     LGMTVLGYESTVQVTLADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKL
                     YQETNANAIKAEGAHITPFIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQ
                     LILDAKNVEQAGAVALVLEAIPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLN
                     YGVEHKAKFVKQFADFSVGVDGLKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND"
     gene            2393..3253
                     /locus_tag="OY092_002505"
     CDS             2393..3253
                     /locus_tag="OY092_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCX1077417.1"
                     /translation="MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPH
                     APAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLE
                     HIPFKNICQAVVYISGQKKGDVVTHFRDYQLRIKDNALTRQFRDLVQDSQIDIVLEAN
                     IQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSE
                     QTVDTIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIY
                     SFLRAYQQNM"
     gene            complement(3339..4043)
                     /gene="budA"
                     /locus_tag="OY092_002506"
     CDS             complement(3339..4043)
                     /gene="budA"
                     /locus_tag="OY092_002506"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HCX1077418.1"
                     /translation="MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDG
                     EVIFLDGKAYHANEHKEFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNE
                     MLSENLFSAVKIYGTFKHMHVRMMSAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFT
                     PELFHGVGSAGFHIHFADDERAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVK
                     AKIDYKDVAEEIREAE"
BASE COUNT         1328 a          937 c          620 g         1484 t
ORIGIN      
        1 tcaatatttt tacttcacga aactaaacaa catgtcatta acttatctcg ttaagttaag
       61 aattctattt tctaccaaat aaattctgaa tactgtttta gataatcaat tcgcaaaact
      121 atttctttat aaatatgtcc atcatttaac actgataaaa ttgcaacgat aataccttta
      181 cttctattac gctaacccaa ttggcataaa aataaaaacc cctaatggat aactacattg
      241 ttatctacta gaggtttcta acttatacta ttttataaca ctatcgtatt ttctttttca
      301 tgaatcattt caataatgac attgtcttca ttcattactg ctactttagg tgcatggttt
      361 ttaatttctt cttcattcaa ctgtgcataa gtcatgatta tgactacatc gcctacttca
      421 acaagtcttg atgctgcacc gttcaaacaa attttaccac tacctctttc accagctatt
      481 acgtatgttt caaaacgtgc accattatta ttattcacga tggctacttt ttcatttggc
      541 aagatgtcta ccgcttccaa aatatctgaa tcaatcgtaa tactacctac ataatttaaa
      601 tttgactcag tcactcttgc tctatgaatt ttagcattca tcattgttct tatcacttta
      661 ttcagctcca attattatat tatctattaa acgcgctttt gaaaatttga cagctaacga
      721 gataaatatg cgtccagtta tttcgtgttg ttctactaat tgaggataac tataaacagc
      781 aacttcttca atgcgtccac ttatatgtga ttcaagatat tcagtaaccc tgtctataat
      841 tactttactt tgacgttcac cgtcttgata caacgcttgt gctaatagca aacttttact
      901 taaatgtacc gcttcttgtc gttcttgctc cgttaaataa acatttcttg aacttttcgc
      961 caaaccatct gcttctcgaa cgatatcaat accaataatt tcaacggcat gattgaagtc
     1021 ttttaccatt tgctcgacaa tagccaattg ctgggcatct tttttaccaa aataagcata
     1081 atccggcata acaatattaa atagcttatt aactactgtt accaccccat caaaatgccc
     1141 tggacgcttc gctccttcta acacatcagc taatggacct actttgacat caatacctaa
     1201 ttcacctgga tacatatctt ctactgcagg atgaaaaaca atgtccgccc ctacttctga
     1261 tactaattct aaatctttat caatttgtct cggataagca tcgaaatctt cgtttggacc
     1321 aaattgtaat ggattaacaa atacactcac aactgtaata tcatttgtac taactgattc
     1381 gcgtaccatc gttaaatgtc catcatgtaa ggcacccatt gttgggataa aaccaatcgt
     1441 tgttcctgag cgtttggctg ctttaacaat gtgttgcatc tcttttaccg tagtaatcag
     1501 cttagtcatt gttattaacc tcattcataa ttttcttttt atacgtatat tcttctgatg
     1561 gaaatgcacc agatttaact tcttgatcgt attgttttaa accatccaca ccaacactaa
     1621 aatcagcaaa ttgcttcaca aatttcgctt tatgttcaac accataattt aacatatcgt
     1681 gataaaccaa tacttgacca tctgtacctt ttcctgcacc aataccaatg actggaattg
     1741 ttaagtgctt gctaatttct tctgctaaat catttggaat tgcttcaagt actaacgcaa
     1801 ctgcaccagc ttgttctaca tttttcgcat ctaaaataag ttgctccgct gcttctttcg
     1861 ttgcaccttg taatttatac cccataacgc caacactttg aggtgttaat cctaaatgtg
     1921 caacaacagg aataccaatt gccgttgctt tttcaataaa tggtgtaata tgcgctcctt
     1981 ctgctttaat tgcatttgca ttcgtctcct gataaagctt tagagcatga tttaagtctt
     2041 gtgtcataga gatgcctact gcaccaatcg gcatatcaac aactacaaat gtatttggtg
     2101 cgcctcttct tactgcacga ccgtgatgaa tcatatctgc taacgtcact tgtacggtac
     2161 tttcataacc taatacagtc ataccaagtg aatccccaac aagaatcata tcaatacccg
     2221 ctgcttccac ttgtttagca cttggaaaat cataagctgt taccatagaa attttagttt
     2281 gcttttgttt catatctatt aattgactta ctgttttcaa tgttattcaa cctctttttg
     2341 cagtattatt agaaatagta taatgaatct tttatagaaa ggaaagaaga agatgttatc
     2401 agttgcgatt atcggcccag gcgctgtcgg tacaactatt gcctatgaat tacaacaatc
     2461 attgcctcat acaacgctta tcgggagaca cgccaaaaca ataacatatt atactgtacc
     2521 acatgcacct gcacaagata ttgttgtgaa aggttatgaa gatgtcacaa acacatttga
     2581 tgttattatt attgcagtca aaacacatca acttgatgca gttattcctc atttaactca
     2641 tcttgcacat gaggacacgc tcatcatttt agcccaaaat ggttatggtc aactcgaaca
     2701 tattccattt aaaaacatat gccaagcagt tgtctatata agtggtcaaa agaaaggcga
     2761 tgttgttacg cacttcagag attatcaatt acgtataaaa gataatgcat taacacgaca
     2821 atttagagat ttggtccaag acagtcaaat cgacattgta ttagaagcaa atattcagca
     2881 agctatttgg tataaattgt tagttaactt gggcattaat tctatcacag cactcggtag
     2941 acagacagtt gcaatcatgc ataatcctga aatacgtaca ctgtgtagac agctattact
     3001 agatggttgt cgtgttgcac aggcagaggg gttaaacttt tcagaacaaa ctgtcgatac
     3061 tattatgact atatatcaag gttatcccga cgaaatggga acgagcatgt attacgacat
     3121 tgtgcatcag caacctcttg aagtcgaagc gattcaaggc tttatttatc gacgtgcacg
     3181 tgaacacaat cttgacaccc catatcttga tactatttat agctttttac gcgcgtatca
     3241 acaaaatatg taaccacata tataatataa aaagacctta acgatgcatt tagaaccacc
     3301 tgttcctaat atcgctaagg tcttttaatt atattagact attcagcttc tctaatttct
     3361 tctgccacat ctttatagtc tattttcgct ttaacaaacg tctcgttatt taccgggaaa
     3421 tgttgttgga atgtttcaaa gttttgtatc tcaacgacaa cgtcatccac ttcaaagtca
     3481 agaacatgtc caccataagc tctttcatca tccgcaaaat gtatatgaaa accagcagac
     3541 cctacgccat gaaataattc tggtgtaaaa aatccaacaa tggcaccacg aatatcttgt
     3601 cttttttcct caggttgtct gcgtgctgaa tcaatcaaac gtgtatatgg cggttgctga
     3661 gcagacatca ttcgtacatg catatgttta aatgtgccat aaattttaac agccgaaaat
     3721 aaattctcac ttaacatttc atttttaatt tgtgcgaata catcatcttg tgataattgt
     3781 tgcaatggaa atgtcttact cgctttaaaa ttagtaatcg atgcataggg tactttctca
     3841 tcgcctttta attctataaa ttctttatgc tcgttagcat gatatgcctt cccgtctaaa
     3901 aatattactt cgccatcaga ccctgttaac gttgcaatcc ctaaattccc atgttctaac
     3961 aattcattaa ttgtagctgt tccttctagt aagccagcca ttaacgtacc taatgtacca
     4021 tgttgataca agacattcgt cattccaaaa ccatctccct atagttattc ctcgttgtca
     4081 tgctctactt cgtgattaat gcagaactac tttcctttat actcaatgac gtctcggcat
     4141 ttcgattcat gtcactaaat tttcacgagt cataatactt tattcaatta ttattttacg
     4201 caaaagtatt gcctctatca atgcttgcta aatcaaaacc acccgtgtga acgggtggtt
     4261 tgttctgcgg ctataagcct tccttactgg ccagccctaa aagggcactg acaagtcagc
     4321 caactgcact actattccag caaccctaaa gggttactct tttttcttt
//
LOCUS       DAKPJH010000158         4308 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.160, whole genome shotgun sequence.
ACCESSION   DAKPJH010000158 DAKPJH010000000
VERSION     DAKPJH010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.160"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(443..548)
                     /locus_tag="OY092_002507"
                     /pseudo
     CDS             complement(443..548)
                     /locus_tag="OY092_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499028.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(753..1349)
                     /gene="recR"
                     /locus_tag="OY092_002508"
     CDS             complement(753..1349)
                     /gene="recR"
                     /locus_tag="OY092_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HCX1077419.1"
                     /translation="MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFA
                     KALVDVKRELTYCSVCGHITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKG
                     LYHVLHGSISPMDGIGPEDINIPSLIERLKSDEVSELILAMNPNLEGESTAMYISRLV
                     KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM"
     gene            complement(1356..1673)
                     /locus_tag="OY092_002509"
     CDS             complement(1356..1673)
                     /locus_tag="OY092_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HCX1077420.1"
                     /translation="MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAV
                     TVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNI
                     PGM"
     gene            complement(1763..3460)
                     /gene="dnaX"
                     /locus_tag="OY092_002510"
     CDS             complement(1763..3460)
                     /gene="dnaX"
                     /locus_tag="OY092_002510"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HCX1077421.1"
                     /translation="MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFS
                     GPRGTGKTSIAKVFAKAINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVD
                     EIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPH
                     KIPPTIISRAQRFDFKAISLDQIVERLKFVADAQQIECEDAALAFIAKASEGGMRDAL
                     SIMDQAIAFGDGTLTLQDALNVTGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGK
                     EVNRLINDMIYFVRDTIMNKTSEKDTEYRALMNLELDMLYQMIDLINDTLVSIRFSVN
                     QNVHFEVLLVKLAEQIKGQPQVIANVAEPAQIASSPNTDVLLQRMEQLEQELKTLKAQ
                     GVSVAPTQKSSKKPVRGIQKSKNAFSMQQIAKVLDKANKADIKLLKDHWQEVIDHAKN
                     NDKKSLVSLLQNSEPVAASEDHVLVKFEEEIHCEIVNKDDEKRSSIESVVCNIVNKNV
                     KVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQAQQTDIAQKAKDLFGEETVHVIDEE"
     gene            complement(3529..4053)
                     /locus_tag="OY092_002511"
     CDS             complement(3529..4053)
                     /locus_tag="OY092_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCX1077422.1"
                     /translation="MQIYLSTLTELDYDKSLNSIEESFDDNPETSWQARAKVKHLRKS
                     PCYNFELEVIAKNENNDVVGHVLLIEVEINSDDKTYYGLAIASLSVHPELRGQKLGRG
                     LVQAVEERAKAQEYSTVVVDHCFDYFEKLGYQNAAEHDIKLESGDAPLLVKYLWDNLT
                     DAPHGIVKFPEHFY"
     gene            complement(4191..4292)
                     /locus_tag="OY092_002512"
     CDS             complement(4191..4292)
                     /locus_tag="OY092_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077423.1"
                     /translation="MKTIQRIIRGTCLWEVAFLYVKFDSSELDVQFE"
BASE COUNT         1316 a          926 c          559 g         1507 t
ORIGIN      
        1 tttcttaccg acaagaatta attatacatt ttattaacat ttaagtcaac aactttttaa
       61 aattaatttt cgttagtaat tcaagttatt tcttaagttg agttgttttg tttgcctcaa
      121 caaataaata ctatacaggc tttcaaactg cttaacaaca gtaaaaatta cacctttgcc
      181 atctgtactg aacgccctta tcctaaaaat cgaacttaaa aaatccccac ttataaatag
      241 tacgtttttt agaacaagaa acagattttt ctctaaccat atcaatcaaa aaaaaccgca
      301 aaacagaact ttattttttt accagaaatt aaaaataaat ttacaagttt taaataacct
      361 ctcaaaacac cgctatacag gctgatttaa taaactttag accaaagaag tacaactact
      421 aagccagcat ctatcatttc aattacaaaa gaatttcatt tgcatagtca ttaaccatca
      481 accgcattta tcaaattaat agcaccaaca caccataacc gtagatctaa ttcgataatc
      541 caattcacat cattactatt agaagtaaca aatcacaacc aacggcttgc ttcctaaaga
      601 ttacccatcc ctcagtaaaa ctaggtaaac cataccaccg ccacaccgca aataaagtag
      661 tacatcacac cacaccataa aaaaagccac aatgattaca ctgtgacttt tcttactata
      721 gtattaaatt caaaaatgtt taatagaaga cattacattt ctgttctacc tgcgattgct
      781 ttagataaag ttacttcgtc agcatactct aaatcgccac ctaccgataa cccttgtgct
      841 aatctcgtca ctttgatacc tataggctta actaatctag aaatatacat ggctgtagat
      901 tccccctcta agttcgggtt catagctaag attaattcgc taacttcatc gctttttaag
      961 cgttcaatca atgaaggaat attaatatct tctggtccaa tgccatccat aggcgaaata
     1021 gacccatgta aaacgtgata taaacctttg tattctctca ttttttccat agctatgaca
     1081 tctttgtcat cttccacaac acaaataact gaacgatctc tttgcttatc ttcacaaata
     1141 taacatggat cattttcagt aatgtgacca catacgctac aatatgttaa ttctctttta
     1201 acatctacta atgctttggc aaactgaaca acatcgtctt ctttcatatc taaggtatga
     1261 aaagccagac gttgggctgt ctttggacca atgcctggca atttcataaa gctatcaata
     1321 agttttgata taggttctgg ataatgcatc tatgatcaca ttccagggat gtttaagcct
     1381 tgagtatgtt tacctaaacg ttcttgagta agctcatcag ctttattcat cgcttcatta
     1441 gtagctgcta acactaagtc ttgtagcatt tcaatatcat ctgggtctac agcttcttct
     1501 ttgatttcaa cgtcgacaac ttctttatga ccagttacag taactgcaac catgccaccg
     1561 ccagctgttc ctacaatacg ctcttcttta agtttttctt gttcttgagc cattttcttt
     1621 tgcatttttt gcatttgttt catcatttgt tgcatgtttc cgccaccgcg catattccat
     1681 ttcctccttg aaaatcaata aatatttatc aataaaatga tgtttctttc attatacata
     1741 cgattatatc gcttgtcatg tatcactctt catctatcac atgtacagtt tcttcaccga
     1801 aaagatcttt tgctttttga gcaatatctg tttgttgcgc ttgttgcttt ggcatatcat
     1861 cgccttcgtt tttacgattt tgtaaatact ccgttcgaac tctttgccat tgatctgatg
     1921 gtacaccaac aactttaacg tttttattaa cgatattaca tacaacactt tctatgctac
     1981 tacgtttctc gtcgtcttta ttgacgattt cacaatggat ctcttcctca aatttcacaa
     2041 gtacgtgatc ttcacttgcc gccacaggtt ccgaattttg caataaacta acgagtgatt
     2101 ttttatcatt gtttttggca tgatcaatca cttcttgcca atgatctttc aacaatttga
     2161 tatctgcctt attcgcttta tctagcactt ttgcaatttg ttgcattgaa aatgcatttt
     2221 tagatttttg tatacctctc acaggctttt tcgaagattt ttgagtagga gcgacactca
     2281 ctccttgtgc ttttagtgtt tttagttctt gctctaactg ttccatacgt tgcaacaata
     2341 catctgtgtt tggcgatgaa gcaatttgtg ctggttcagc tacattcgca atcacttgtg
     2401 gttgaccctt aatctgctca gctaatttta ctaacaacac ttcaaaatga acgttttgat
     2461 tcacactaaa acgaatcgac actaatgtat cattaataag atcaatcatt tgatataaca
     2521 tatctaattc taagttcatc agtgctcgat actcagtatc tttctcagat gttttattca
     2581 taatcgtatc tctgacaaaa taaatcatat catttattag gcgattcact tctttacctt
     2641 ctgttataaa ctgatggtat tttttaaaag atgcttgtac gtcaccttgt acaatatcat
     2701 caaacaagtg atccaacgct tcatcatgta cgctacctgt gacattcaac gcatcttgca
     2761 atgttaacgt accatcacca aatgcaatag cttggtccat aatacttaat gcatcacgca
     2821 tacccccttc agacgcttta gcgataaatg ccaaggctgc atcttcacat tcaatttgtt
     2881 gtgcatctgc tacaaatttt aaacgttcaa caatttgatc taggctaatt gctttaaaat
     2941 caaaacgttg cgccctagaa atgattgttg gagggatttt atgtggttct gtcgttgcca
     3001 atataaaaat agcgtgtgct ggaggttctt ctaacgtctt taaaagggca ttaaaagcac
     3061 ctgttgttag catgtgcacc tcatctataa tataaacttt atatttcgat tcacttggtg
     3121 catatttaac tttgtctcta atatttctta tttcatcaac gccattatta ctagcagcat
     3181 caatttctat cacatctgaa ttagtcccct gcgtaatgcc tttacaaata tgacattcat
     3241 tacaaggttc tccatcagtg ctatttaaac agttgattgc tttagcaaac actttggcaa
     3301 tactcgtttt ccccgtacct ctcggaccac taaaaatata agcatgcgac tgtttttctt
     3361 tcgaaatcgc attgcgcaat gtcttcgtga catgttcttg tccgacgaca tcctcgaaac
     3421 tttggggtct gtacatacga tataaggctt gataattcaa gttagcacct ccataaacaa
     3481 ttacctctca ttatagcatg ataatacctt tacttcttaa ttgaacaatt aataaaaatg
     3541 ttctggaaat tttacgattc cgtgtggtgc atccgtcaaa ttatcccata aatattttac
     3601 aagtaacggt gcatcaccag attctaattt aatgtcatgc tcagcagcat tttgataacc
     3661 caacttttca aagtagtcaa aacaatggtc tacaacaacc gtactatact cttgtgcttt
     3721 ggcacgctct tctactgctt gaaccaagcc acgacctaat ttttgtccac gtaattcagg
     3781 atgaactgat aaagaggcaa tcgccaaacc ataatacgtc ttatcatcac tattaatttc
     3841 tacttcaatt aataaaacgt gtccaacgac atcgttattt tcatttttcg ctattacttc
     3901 taattcaaaa ttatagcaag gagattttct taaatgtttt actttcgcac gtgcttgcca
     3961 actcgtttca ggattatcat caaaactttc ttcaatacta tttaaagatt tatcataatc
     4021 taactctgtt aaagtactta aatatatttg catatgtcct ccgtaggcat ttgattgtca
     4081 ataatcataa cgtatctcat taataattct attgtaagat actccccctc atttcaccat
     4141 catttcttta tcatcaaatt ataacttctt acttttcatt gacacaaaaa tcattcaaac
     4201 tgtacatcga gttcacttga atcaaacttc acatataaaa aagctacttc ccacaaacat
     4261 gttccacgta taatacgctg aattgtcttc aagaaagtag cttctata
//
LOCUS       DAKPJH010000159         4224 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.161, whole genome shotgun sequence.
ACCESSION   DAKPJH010000159 DAKPJH010000000
VERSION     DAKPJH010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4224
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.161"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..755
                     /gene="seo"
                     /locus_tag="OY092_002513"
     CDS             <1..755
                     /gene="seo"
                     /locus_tag="OY092_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="staphylococcal enterotoxin type O"
                     /protein_id="HCX1077424.1"
                     /translation="LLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNIND
                     DYINNRFTTVKSIVSTTEKFLDFDLLFKSINWLDGISAEFKDLKVEFSSSAISKEFLG
                     KTVDIYGVYYKAHCHGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNVNTFI
                     VTTDKKKVTAQELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFY
                     IKGNLPDQYLQIYNDNKTIDSSDYHIDVYLFT"
     gene            1036..1755
                     /gene="sem"
                     /locus_tag="OY092_002514"
     CDS             1036..1755
                     /gene="sem"
                     /locus_tag="OY092_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_058008129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type M"
                     /protein_id="HCX1077425.1"
                     /translation="MKRILIIVVLLFCYSQNHIATADVGVLNLRNYYGSYPIEDHQSI
                     NPENNHLSHQLVFSMDNSTVTAEFKNVDDVKKFKNHAVDVYGLSYSGYCLKNKYIYGG
                     VTLAGDYLEKSRRIPINLWVNGEHQTISTDKVSTNKKLVTAQEIDTKLRRYLQEEYNI
                     YGFNDTNKGRKYGNKSKFSSGFNAGKILFHLNDGSSFSYDLFDTGTGQAESFLKIYND
                     NKTVETEKFHLDVEISYKDES"
     gene            1790..2518
                     /gene="sei"
                     /locus_tag="OY092_002515"
     CDS             1790..2518
                     /gene="sei"
                     /locus_tag="OY092_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_031927819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type I"
                     /protein_id="HCX1077426.1"
                     /translation="MKKFKYSFILVFILLFNIKDHTYAQGDIGVGNLRNFYTKHDYID
                     LKGVTDKNLPIANQLEFSTGTNDLISESNNWDEISKFKGKKLDIFGIDYNGPCKSKYM
                     YGGATLSGQYLNSARKIPINLWVNGKHKTISTDKIATNKKLVTAQEIDVKLRRYLQEE
                     YNIYGHNNTGKGKEYGYKSKFYSGFNNGKVLFHLNNEKSFSYDLFYTGDGLPVSFLKI
                     YEDNKIIESEKFHLDVEISYVDSN"
     gene            2672..3442
                     /gene="seu"
                     /locus_tag="OY092_002516"
     CDS             2672..3442
                     /gene="seu"
                     /locus_tag="OY092_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_031927818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type C1/U"
                     /protein_id="HCX1077427.1"
                     /translation="MKLFAFIFICVKSCSLLFMLNGNPKPEQLNKASEFTGLMDNMRY
                     LYDDKHVSETNIKSQEKFLQHDLLFKISGSKILKTEFNNKSLSDKYKNKNVDLFGTNY
                     YNQCYFSSDNMELNDGRLIEKTCMYGGVTEHDGNQIDKNNSTDNSHNILIKVYENERN
                     SLSFDIPTNKKNITAQEIDYKVRNYLLKHKNLYEFNSSPYETGYIKFIEGSGHSFWYD
                     LMPESGKKFYPTKYLLIYNDNKTVESKSINVEVHLTKK"
     gene            3481..>4224
                     /gene="sen"
                     /locus_tag="OY092_002517"
     CDS             3481..>4224
                     /gene="sen"
                     /locus_tag="OY092_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type N"
                     /protein_id="HCX1077428.1"
                     /translation="MRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFN
                     LTSYYTDITWQLDESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKG
                     KNIDIYGLYFGNKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDGVQQEGFV
                     IKTKKAKVTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYN
                     VKGSVGAEFFQFYSDNRTVSSSNYHIDVFL"
BASE COUNT         1717 a          452 c          645 g         1410 t
ORIGIN      
        1 tattattatt aattttaaat ttaattgcaa tatgtagtgt aaacaatgca tatgcaaatg
       61 aagaagatcc taaaatagag agtttgtgta agaagtcaag tgtagaccct attgctttac
      121 ataatattaa tgatgattat ataaataatc gatttacgac agtaaaatca attgtatcaa
      181 ctacagaaaa attcttagac ttcgatttat tatttaaaag tattaattgg ttagatggaa
      241 tatctgctga atttaaagat ttaaaagtgg aatttagctc atcagcgatt tctaaagaat
      301 ttctaggaaa gactgttgat atttatggtg tttactataa agcacattgt catggtgagc
      361 atcaagtgga tactgcctgt acatatggtg gggtaacacc tcatgaaaat aataaattaa
      421 gcgagcctaa aaatatagga gtagctgtgt ataaggataa tgtaaatgtt aatacattta
      481 tcgttactac agataaaaag aaagttactg cacaagaact tgatattaaa gtaagaacaa
      541 aattaaataa tgcatataaa ttgtatgaca gaatgactag tgatgtacaa aaaggttata
      601 ttaaatttca ttctcattcg gagcataaag aatcatttta ttatgattta ttttatatta
      661 aaggaaattt accagatcaa tatttgcaaa tttataatga taataaaaca atagattcat
      721 cagactatca tattgatgtt tatttattta cataacaatc tgaaagttga tggatatcaa
      781 cttacaatcc tataaagaac tatagatatt aacatatttt tacaaagtag cttagtaaat
      841 gatgaagaac gaatagtgat tcaaatctaa ctttattact ataaaaagct ttctatttta
      901 gtatagataa caaaaccaga ttaacgagta ataatatata agtgggatag aatcatgatg
      961 atttaagaag aattggctat ttttacaata aaagataata aagatagaga agtttaaata
     1021 taggagaaat aaaatatgaa aagaatactt atcattgttg ttttattgtt ttgctattcg
     1081 caaaatcata tcgcaaccgc tgatgtcgga gttttgaatc ttaggaacta ttatggtagc
     1141 tatccaattg aagaccacca aagtattaat cctgaaaata atcatctttc gcatcaatta
     1201 gttttttcta tggataattc gacagtaaca gctgaattta agaacgttga tgatgtaaag
     1261 aaattcaaaa atcatgctgt agatgtatat ggtctaagtt atagtggata ttgtttgaaa
     1321 aacaaatata tatacggtgg agttacatta gcaggtgatt atttagagaa atctagacgt
     1381 attcctatta atctttgggt taatggagaa catcaaacta tatctactga caaagtatca
     1441 actaataaaa agttagtaac agctcaagaa attgatacta aattaagaag atatctacaa
     1501 gaagaatata atatttatgg ctttaatgat acaaataaag gaagaaaata tggtaataag
     1561 tcaaaattta gttctggatt taatgcagga aaaatattat ttcatttgaa tgatggttca
     1621 tcattttctt atgacttatt tgatactgga acaggacaag ctgaaagttt cttaaaaata
     1681 tataatgaca acaaaactgt cgaaactgaa aaattccatt tagatgtaga aatatcttat
     1741 aaggacgaaa gttgaagtat ttcaatcata acttagtaaa ggaaatgcca tgaaaaaatt
     1801 taaatatagt tttatattag tttttatatt actttttaac attaaagatc atacgtatgc
     1861 tcaaggtgat attggtgtag gtaacttaag aaatttctat acaaaacatg attatataga
     1921 tttaaaaggc gtcacagata aaaacctacc tattgcaaat caactcgaat tttcaacagg
     1981 taccaatgat ttgatctcag aatctaataa ttgggacgaa ataagtaaat ttaaaggaaa
     2041 gaaactggat atttttggca ttgattataa tggtccttgt aaatctaaat acatgtatgg
     2101 aggggccact ttatcaggac aatacttaaa ttctgctaga aaaatcccta ttaatctttg
     2161 ggttaatggc aaacataaaa caatttctac tgacaaaata gcaactaata aaaaactagt
     2221 aacagctcaa gaaattgatg ttaaattaag aagatatctt caagaagaat acaatatcta
     2281 tggtcataat aacactggta aaggcaaaga atatggatat aaatctaaat tttattcagg
     2341 ttttaataat gggaaagttt tatttcattt aaataatgaa aaatcatttt catatgattt
     2401 gttttataca ggagatggac tgcctgtaag ttttttgaaa atttatgaag ataataaaat
     2461 aatagaatct gaaaaatttc atcttgatgt cgaaatatca tatgtagata gtaactaatg
     2521 ataattagtt ttaacactaa aatgcgaatt tatacgaaat taatatatgt attaactatt
     2581 taaattttaa agtctctagg gctaatgtgt atgttaaata ttccctgtaa tacatcaaat
     2641 ttataaaaaa ttaaaatatg gagttgttgt aatgaagtta tttgccttta tcttcatatg
     2701 tgttaagtct tgcagcttac tatttatgtt aaatggcaat cctaaaccag aacaattgaa
     2761 taaagcgagt gaattcactg gtctaatgga taatatgagg tatttgtatg atgataaaca
     2821 cgtatcagaa acaaacatta aatcccaaga aaagttttta caacatgatt tattatttaa
     2881 aataagtggt tctaaaattt taaaaacaga atttaataat aaaagccttt cggataaata
     2941 taaaaataaa aacgtagatt tgtttgggac aaactattat aatcaatgct atttttcatc
     3001 ggataatatg gaattaaatg atggtagatt aattgaaaaa acgtgtatgt atggcggtgt
     3061 gaccgagcat gatggaaatc aaatagataa aaataattca actgataact ctcataatat
     3121 cttaattaaa gtttatgaaa acgagagaaa ttcattatct tttgatatac ctactaataa
     3181 gaaaaacata acagcacaag aaatagatta taaagttaga aactatttac ttaagcataa
     3241 aaatttatat gaatttaaca gttcgcctta tgagactggc tatataaagt ttatcgaagg
     3301 aagtggtcat tctttttggt atgatttgat gcctgaatct ggtaaaaaat tttatccgac
     3361 taaatattta ctaatttata atgataataa aacagttgag agtaaatcta ttaatgtaga
     3421 agttcattta accaaaaaat aattgaggga gagaatatta taaaaaatat taaaaagctt
     3481 atgagattgt tctacatagc tgcaattata ataactttat tatgtcttat taataataat
     3541 tatgttaatg ctgaagtaga caaaaaagat ttaaagaaaa aatctgatct agatagtagt
     3601 aagttattta atttaacaag ctattatact gatataacgt ggcaattaga cgagtcaaat
     3661 aaaattagta cagatcaact actgaataat actataatat taaaaaatat tgatatatcc
     3721 gtacttaaaa cttctagttt gaaagttgag tttaactcat cagatttagc aaatcaattt
     3781 aaaggaaaaa atatagatat ttatggactg tattttggaa ataaatgtgt aggcttaact
     3841 gaagaaaaaa catcatgctt atacggagga gttacgatac atgatggaaa tcaattagat
     3901 gaagagaaag ttataggcgt taatgtattt aaagatggtg tccaacaaga aggttttgtt
     3961 ataaaaacca aaaaggctaa agtaacagta caagaattag acactaaagt tcgatttaaa
     4021 ttagaaaatt tatataaaat atacaataaa gataccggta acatacaaaa aggatgcatt
     4081 ttctttcatt ctcataatca tcaagatcaa tcattttatt atgatttata taacgtaaaa
     4141 ggttcagtgg gagcagagtt ttttcaattt tatagtgata atagaacagt tagctcatct
     4201 aattatcata ttgatgtatt ttta
//
LOCUS       DAKPJH010000160         4172 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.162, whole genome shotgun sequence.
ACCESSION   DAKPJH010000160 DAKPJH010000000
VERSION     DAKPJH010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4172
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.162"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..586)
                     /locus_tag="OY092_002518"
     CDS             complement(<1..586)
                     /locus_tag="OY092_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HCX1077429.1"
                     /translation="MSQNTNHSYFQQNQHAQSISKVWLYFMYYWIIFGIGCYLGQFLP
                     LSWRQPLSFGLLIIILATLVFERARRFGLIISHIYAVVIGLLSYATFTTYLQNLGPDI
                     FYKNIALAIFAFIAFGIIGYFFVGDASSIGKYLFVTLITLIIASLIGIFLHNPIFYTV
                     ITVVSLLLFLLYTLYDFNRLKRGDYSPREMGFNLF"
     gene            947..1744
                     /locus_tag="OY092_002519"
     CDS             947..1744
                     /locus_tag="OY092_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HCX1077430.1"
                     /translation="MKKLAFAITATSGAAAFLTHHDAQASTQHTVQSGESLWSIAQKY
                     NTSVESIKQNNQLDNNLVFPGQVISVGGSDAQNTSNTSPQAGSASSHTVQAGESLNII
                     ASRYGVSVDQLMAANNLRGYLIMPNQTLQIPNGGSGGTTPTATTGSNGNASSFNHQNL
                     YTAGQCTWYVFDRRAQAGSPISTYWSDAKYWAGNAANDGYQVNNTPSVGSIMQSTPGP
                     YGHVAYVERVNGDGSILISEMNYTYGPYNMNYRTIPASEVSSYAFIH"
     gene            complement(2331..3338)
                     /locus_tag="OY092_002520"
     CDS             complement(2331..3338)
                     /locus_tag="OY092_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HCX1077431.1"
                     /translation="MSYIIIVTIAVVIFSLIFDFINGFHDTANAVATAVSTRALTPKT
                     AILMAAVMNFIGALTFTGVAGTITKDIVDPFKLENGLVVVLAAILAAIVWNLATWFYG
                     IPSSSSHALIGSIAGAAIASEGSFGVLHYQGFTKIIIVLIVSPIIAFCVGFLMYSIFK
                     VIFKNANLTRANRNFRFFQIFTAALQSFSHGTNDAQKSMGIITLALIVANVQNDGSVE
                     PQLWVKFACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLH
                     FPLSTTHVVSSSILGVGASNRAKGVKWSTAQRMIITWVITLPISALLAGLLFYILNLF
                     F"
     gene            complement(3354..3971)
                     /locus_tag="OY092_002521"
     CDS             complement(3354..3971)
                     /locus_tag="OY092_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HCX1077432.1"
                     /translation="MFSKKKDKFMVQLEEMVFNLDRAAIEFGKMDFNTHLDLKAYSDN
                     IKTYESHGDELVHQVITDLNQTFITPIEREDILSLCDAIDDVLDAIEETAAMFEMYSI
                     EYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSI
                     KHIFNSETDPITLIKIKDIYESMEEIADKCQIVANNFETIIMKNS"
BASE COUNT         1494 a          720 c          587 g         1371 t
ORIGIN      
        1 taaatagatt aaatcccatt tctcttggtg aatagtcacc tctttttaaa cgattaaaat
       61 catacaaagt ataaagtaga aataacaaca gactaacgac ggtaataaca gtataaaaaa
      121 taggattatg cagaaaaata ccaattagac tcgcaataat taaagttatt aatgtaacga
      181 ataaatactt acctatactt gatgcatctc caacgaagaa ataaccaata ataccaaatg
      241 ctataaatgc aaaaattgct aatgcgatat ttttatagaa aatatctggt cctaaatttt
      301 gtaaatacgt ggtaaacgtt gcgtatgaca ataagccaat tactacagcg taaatatgtg
      361 aaatgattaa accgaaccgt ctcgctctct caaatacaag tgttgctaaa ataataatca
      421 gtaatccaaa tgacaagggt tgtcgccaac ttaatggtaa aaactgacct agatagcatc
      481 ctatgccaaa tataatccag taatacataa aataaagcca cactttactt attgattgag
      541 catgctggtt ttgctgaaaa tatgaatgat ttgtattttg cgacaaaata attcctcctt
      601 ctactgtcgt tttatgcgtc aaattttaca gtaaattttg cttcatcaaa agaaataacc
      661 tttaacaagt acagtaattt tacattttac aatgttacaa aatataaatt tttataatta
      721 gttaaaatca ctaaaacgct tttatacact atcaaatcag catttataaa aatatgaacc
      781 gatatcctaa aatgttaata atattacaag ataataacaa accacacaaa gctacttatt
      841 tttgataata tggaaagcgt aatataaaac gaaaacttaa tttactatat aaattgtctt
      901 aataattttt aaaagtagta aatcttaatt ttaaggagga gtccctttga aaaaattagc
      961 atttgcaata acagcaacat ctggtgcagc tgcattttta acgcatcatg atgcacaagc
     1021 ttctacacaa catacagtac aatctggtga atcattatgg agtattgctc aaaaatacaa
     1081 cacttcagta gagagtatta aacaaaataa ccaattagat aacaacttgg tattccctgg
     1141 tcaagttatc tcagtaggtg gaagtgatgc acaaaatacg tcaaacactt ctccacaagc
     1201 tggttcagca tcatctcata ctgtacaagc tggtgaatca ttaaatatca ttgctagcag
     1261 atatggtgtt tcagttgatc aattaatggc agccaataac ttacgtggtt atttaattat
     1321 gcctaaccaa acattacaaa ttcctaatgg tggatcaggt ggtacaacac caacagctac
     1381 aacaggtagc aatggcaatg catcatcttt taatcaccaa aatttataca ctgctggtca
     1441 atgtacatgg tacgtgtttg accgtcgtgc tcaagctggt agtccaatta gcacatattg
     1501 gtcagacgct aagtattggg ctggtaacgc agctaatgat ggttaccaag taaacaacac
     1561 accatcagtt ggttcaatta tgcaaagcac acctggccca tatggtcatg ttgcttatgt
     1621 tgaacgtgtc aatggtgatg gtagtatctt gatttctgaa atgaattaca catatggtcc
     1681 atacaatatg aactaccgta caattccagc ttcagaagtt tctagctatg cattcatcca
     1741 ttaattaaat aaattgtact gatatatact agcaattcac atcatgtgag attgctagtt
     1801 ttttattttt gaaaaaaatt ttcattttgg tacaaaaaat tatctcaccc ttccctatca
     1861 tacttattta tattttgtat gaatggtagt taggtaaaaa ataataacct acctatttga
     1921 ttaaattaaa tgcataatat attaaaaatc aaaataatgc aactaagttg actatataat
     1981 gatttaattt gttataccag tattttacgc tttttcgtct acatatacaa atttatatta
     2041 aataaagtcc aatacaattt aggttaatca aacaagttga tagctattta attattcatt
     2101 cattgcagaa tataaactat taaatcatta ttttacgctt acttatattt taatgaccta
     2161 actgtttatg ttccatggaa tacatttata acttagcccc taattaaaat gctttgtctt
     2221 ggtcattcta tgtaaattct ataaaatatg ttatctattt acataaaaaa ctgaacttca
     2281 ataccaccac atttttgtga tactgaagtt cagtttagtt ttattttcaa ttagaaaaat
     2341 aagttaagta tatagaatag taaacctgct aacaatgctg aaataggtaa tgtaatcacc
     2401 catgtaatga tcattcgttg cgcagtactc cattttacac ctttagctcg gttagaagca
     2461 ccaacaccta agattgatga tgacacaacg tgagttgttg ataatgggaa atgtagcgat
     2521 gatgcaacaa aaattgttaa tgcagatgat aaatcggccg cagcaccatt tgctggacgt
     2581 attttcataa tattaccacc tacagttttg ataattttcc agccaccaat tgcagtacca
     2641 agccccattg ctgtcgcaca ggcaaatttt acccataact gtggttcaac gctgccatca
     2701 ttctgtacat tagcaacaat caatgccaac gtaataatac ccattgattt ttgcgcatca
     2761 ttcgtaccgt gagagaatga ttgtaacgct gctgtgaaaa tttggaaaaa tctaaagtta
     2821 cgattcgctc ttgttaaatt tgcattttta aagataactt taaaaattga atacatcaag
     2881 aaaccaacac aaaatgcgat aatcggtgaa acgattaata caataataat ttttgtgaaa
     2941 ccttggtaat gtaacactcc aaatgagcct tcagatgcga ttgctgctcc cgcaattgaa
     3001 cctataagtg catgtgaaga cgaacttgga attccgtaaa accaagtagc taaattccaa
     3061 acaatagccg caagtattgc agctaacaca acaactaagc cattttccaa tttaaatgga
     3121 tcgacaatgt ctttagtaat ggtgcctgca acgcccgtaa atgttaaagc acctataaag
     3181 ttcatcactg ctgccattaa aattgccgtt ttaggcgtta acgctctagt agatacagca
     3241 gtagctactg cattggctgt atcatggaat ccattgataa agtcaaatat cagcgagaaa
     3301 ataactacag ctatagtgac gatgattata tatgacataa atataaactc cccttagcta
     3361 tttttcataa taatagtttc aaaattattt gctacgattt gacatttatc agcgatttct
     3421 tccatgcttt cataaatatc ttttatttta attaaagtga ttggatctgt ttcgctattg
     3481 aaaatatgtt taattgactg tcttaaaata ccatcacagt ttgtttcaaa ttctttaata
     3541 ttaattgaat gaatacgcat atgtgataat tttttatcga ctaataagcc gacagcaagt
     3601 ttcatttctg caactgcttt ttgaatgtta tcaacaaact cagccatata ttcatctgtg
     3661 tattcgattg aatacatttc aaacatagct gccgtttctt caattgcatc taaaacatca
     3721 tcaattgcat cacataatga taaaatatct tcacgttcaa ttggtgtgat aaatgtttga
     3781 tttaaatcag taattacttg atgtactaat tcgtcaccat gtgactcata agttttaatg
     3841 ttgtctgagt atgcttttaa atctaaatga gtattgaaat ccattttacc gaattcaata
     3901 gcagcacgat ccagattgaa aaccatctct tctaattgaa ccataaactt atcttttttc
     3961 ttactaaaca tttaaaatcc tccatttaag cgattgtcac caatcacatt cagttataat
     4021 ttgtttcaaa ttaagacaag tgaatttaca aactaatgat acaaatttgt tattatcaat
     4081 cgtcagtata atttaagtgt actgatatta atttcaaaaa tgcctcacag taaacaattt
     4141 actgtatttg cccttatatg aaaatagcac aa
//
LOCUS       DAKPJH010000161         4137 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.164, whole genome shotgun sequence.
ACCESSION   DAKPJH010000161 DAKPJH010000000
VERSION     DAKPJH010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4137
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.164"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..845
                     /locus_tag="OY092_002522"
     CDS             <1..845
                     /locus_tag="OY092_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HCX1077433.1"
                     /translation="VNKTNMIQKKYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKE
                     LESREKELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQTIIQYIVNYDVNIT
                     EKKEVKVKKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTP
                     IPDSQLNKAKMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEG
                     TREVSQIREIRLYPKGDDYVAKVEILMKDKDSPLENLEHYTLDITKKDGKYYVKNMTN
                     SIGG"
     gene            850..1110
                     /locus_tag="OY092_002523"
     CDS             850..1110
                     /locus_tag="OY092_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077434.1"
                     /translation="MSGLFNFFVLGADRPSLGGVGDWISNEVGTGIGLVVLVVGIVKW
                     ASGKYGHMVILFVVGGFLFLVSKGPEQVFNAIAGVWKMIFGG"
     gene            1122..1505
                     /locus_tag="OY092_002524"
     CDS             1122..1505
                     /locus_tag="OY092_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HCX1077435.1"
                     /translation="MDKKAYNLKRTFEQPIVMYEFTDKFRINKGFRLDFWATFLIVWF
                     ILFLLFWYLLQPVIMSIGGLMFIYFTVAPYYITKYIVKLKQDGKKLFFFLWDFVIFVF
                     NVQLRKVKLSYDEEVEYHDKKITFK"
     gene            1540..4035
                     /locus_tag="OY092_002525"
     CDS             1540..4035
                     /locus_tag="OY092_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCX1077436.1"
                     /translation="MNLKAPYAGLRDNLLLTKTGEVWAYYRVRSESISTANYDAKEES
                     KKRMRYFLESIKGYQDFHFEMYDHDLDLRNKFKEISKDFDDEAFNVAEYYSKETIDVL
                     EQELQMITHNSFVMGVKIRELADDAVTLKEILKSTLSDTAERIVSNFGFDVNLDDKIL
                     DKYKTFERDLADSFLGIGGERLTENELAYIIRKPFISNATHDVQEESSRRAITDIYNA
                     VIDPTRLSVLEVENDNEKFYTTTVVVDDFPLDMEYTHLFEKAQNMPFPVECHVKAKII
                     NNEKVKKKFDRAKINHKQQAKEKQDTGDSASEDVQDNLFVLNQMEREVTGSGVFIEWV
                     FMFVIKSDDYRDCKRKAKRLMKRLKETQIYAVNPLADQLQLFYQCLHGNDLFINKYWL
                     QRTTATGIAENLFGVSQSLGTKTGFYIGRIDKFIRSVSREEAVASSRDIILFSLLLAA
                     KGIKGAVSDSPHVLITGQTGKGKSFLAKLLWIYTSFFKGQMLYWDPKSEFAEWFDRVT
                     ESEEMQQKYPLFINHLKTFKYVTLNYEDSTNYGCLDPIVFLDGIEANEMLKSVFDEIK
                     SFENYHHIETAIYQAISDTVEERENGKKVGSLNVIEKLQNNEDEHVKNAGDLLFEKTQ
                     NNILKLVFSDGTNPALNIQEKATILQVKGLDMPKADDDTSSYSTSEKNGITLMLLIGK
                     FLEKFGSRRDVQTTIFIDEGWAFSASRQGKKVGKRIKRTGRSENNSLVFITQSVKDKA
                     DDDGGNFGCHFAFDEKDEREDILKSLGLEYSKESPENMEMLKDLKKGQCIFSDFYGRV
                     GKMVVHCPFEEMTEAFRTQEDSASSKAEEKFAM"
BASE COUNT         1524 a          409 c          815 g         1389 t
ORIGIN      
        1 cagttaataa aacgaatatg attcaaaaaa agtatgaaga taatgcgaat acagttcagt
       61 atagtcctaa attaaagtta tatgctgata agtttattga tacgtatatg aatatctcga
      121 aagattcaaa agaattggaa tctagagaaa aagaattgtt gaaatatttt ccatcagatt
      181 ataaaaaacc tgatgaaaaa atttcagata cagaacgaaa attgaatagt aaagaatttt
      241 ataatattaa acgtaaagat aaacaaacaa ttatacagta tattgttaat tatgatgtga
      301 atattactga aaagaaagaa gttaaagtta agaagaaaaa gaaaagtgaa aaagataaag
      361 atgagtatga aacaaaaaca gaagaaaagc aacgtaaagt aaatcaaaac attttaataa
      421 atatacctat taagagtgaa aataataagt atgttgttgt tgaatatcct tattttacgc
      481 caatccctga tagtcaattg aataaagcta aaatggttga ggataatttg aaagacaata
      541 aacgggaaga caatccgaaa gcaaaagctt ttattgaaga tttctttaat aaatatgctt
      601 ctagtaagtc tgatgatatg gcctatttaa tggataaccc tgagggctta gaaggaacta
      661 gagaagtttc tcagataaga gaaattaggt tatatccaaa aggcgatgat tatgttgcta
      721 aagttgaaat tttgatgaaa gataaagatt ctcctttgga gaatttggag cattacacat
      781 tagatataac aaaaaaagat ggtaaatatt acgttaaaaa tatgactaat tctattggag
      841 gttaatgtta tgagtggttt atttaatttt tttgttttag gtgctgaccg tccatcactt
      901 ggtggagttg gtgactggat aagtaatgaa gtaggtacgg gtattggttt agtagtattg
      961 gttgttggta ttgtaaaatg ggctagtggt aaatatgggc atatggttat attatttgtt
     1021 gttggtggct ttttattctt agtttctaaa ggtcctgaac aggtatttaa tgcgattgca
     1081 ggtgtttgga aaatgatttt tggcggttga ggtgattcca tttggataaa aaagcttata
     1141 atttaaagcg aacttttgaa caaccgatag ttatgtatga atttacagat aagtttcgta
     1201 ttaataaggg ttttcgttta gatttttggg ctacattttt gattgtgtgg tttatattat
     1261 ttttgttatt ttggtattta ttacagcctg taattatgtc gattggtgga cttatgttta
     1321 tttactttac ggttgcacct tattatataa cgaaatatat tgttaagtta aaacaagatg
     1381 gaaagaaatt atttttcttc ttatgggatt ttgtaatatt tgtttttaat gtgcaattaa
     1441 gaaaagttaa attaagttat gatgaagaag tagaatatca tgataaaaaa ataacattta
     1501 aatagcccct attggggtta tttttattgg agggatgaca tgaatttaaa agcaccgtat
     1561 gcaggtttaa gagataattt gttattaacg aaaactggcg aagtttgggc gtattatcgt
     1621 gttcgttctg agtctatatc aacagcaaat tatgatgcaa aagaagaatc aaaaaagcgt
     1681 atgcgttatt ttttagagtc gattaaaggt tatcaagatt ttcattttga aatgtatgac
     1741 cacgatttag atttgcgaaa taaatttaaa gaaattagta aagattttga tgatgaagct
     1801 tttaatgtag ctgaatatta ttcaaaagaa actattgacg tattagaaca agaattacaa
     1861 atgattacgc ataattcttt tgttatgggt gttaaaatac gtgaattagc tgacgatgca
     1921 gttacactta aagagatttt aaaaagtaca ttatcagata cggctgagcg tattgtttcg
     1981 aattttggtt ttgatgtgaa tttagacgat aaaattttag ataagtataa aacatttgaa
     2041 cgagatttgg ctgatagttt tctaggtatt ggaggcgagc gtttaactga gaatgaattg
     2101 gcttatatta ttagaaagcc ttttatttca aatgcaacac atgacgtaca ggaagaatct
     2161 tcaagaagag ctattacaga tatttataat gcagtaattg accctactcg cttgagtgtt
     2221 ttagaagttg aaaatgataa cgagaaattt tatacaacaa cagttgttgt tgatgatttt
     2281 ccgttagata tggaatatac acatttattt gagaaagctc aaaatatgcc ttttccggtt
     2341 gaatgccatg taaaagcaaa aatcattaat aatgagaaag ttaagaaaaa atttgaccgt
     2401 gcgaaaataa atcataaaca acaagcaaaa gaaaagcaag atactggcga cagtgcttcg
     2461 gaagatgttc aagataattt gtttgtattg aatcaaatgg aacgagaagt gactggctca
     2521 ggtgtattta ttgagtgggt atttatgttt gtaattaaaa gtgatgatta tagagattgt
     2581 aaacgtaaag caaagcgttt gatgaaacga ttaaaggaaa ctcaaatata tgcagttaat
     2641 ccattagctg accagttaca attgttttat caatgtttac atggtaatga tttatttatt
     2701 aataagtatt ggttacaaag aacaacggca acaggtatag cagagaattt atttggtgtg
     2761 tctcaaagtt tgggaacaaa aacgggtttt tatatagggc gtattgataa atttatacgt
     2821 tctgtttcac gtgaggaagc tgttgcaagt tcaagggata taattttatt tagtttattg
     2881 ttggcagcaa aaggtattaa gggggctgtc agtgatagtc cgcatgtatt aattactggt
     2941 caaactggta aaggtaaatc atttttagca aaactattgt ggatttatac atcattcttt
     3001 aaaggtcaaa tgttgtactg ggatccaaaa tctgagtttg cagaatggtt tgatagagta
     3061 acagaaagtg aagaaatgca acaaaagtat cccctattta ttaatcattt aaaaacattt
     3121 aaatatgtaa cattgaatta tgaagattca accaattatg gttgtttaga ccctattgta
     3181 tttttagatg gtattgaagc caatgaaatg ttgaaatcgg tgtttgatga aattaaatct
     3241 tttgaaaatt atcatcatat tgaaacggca atttatcaag ctatttctga tacggttgaa
     3301 gaacgcgaaa atggcaaaaa agttggttca ttaaatgtaa ttgaaaaatt acagaataat
     3361 gaagatgagc atgtaaaaaa tgcaggcgat ttattatttg aaaaaacgca aaacaatatt
     3421 ttaaaacttg tttttagtga tggtacgaat ccagctttaa atattcaaga aaaagcaact
     3481 attttacagg ttaaaggttt agatatgcct aaagcagatg atgatacatc aagttattca
     3541 acaagtgaga aaaatgggat tacattaatg ttattaattg gtaagttttt agagaaattc
     3601 ggttctcgta gagatgttca aacgactata tttattgatg agggttgggc ttttagtgct
     3661 tcaagacaag gtaaaaaagt tggtaagcgt ataaaaagaa cgggacgttc tgagaataat
     3721 tcacttgtat ttattacaca atcggtaaaa gataaagcag atgatgatgg tggtaacttt
     3781 ggttgtcatt ttgcatttga tgaaaaagat gaacgtgagg atattttaaa atctttaggc
     3841 ttagaatatt caaaagaatc tcctgaaaat atggagatgt tgaaagattt aaagaaaggt
     3901 caatgtatat tcagtgattt ttatggacgt gttggaaaaa tggttgtaca ttgtccattt
     3961 gaggaaatga ctgaagcatt tagaacacaa gaagattctg caagttctaa agcagaagaa
     4021 aaatttgcga tgtaaaaaat taaaaagata cactttattg aagtgtatct tttaaacgag
     4081 gtgttataaa tgattgaaat atttaaatca tttatattta tattatttgc atgggta
//
LOCUS       DAKPJH010000162         4059 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.165, whole genome shotgun sequence.
ACCESSION   DAKPJH010000162 DAKPJH010000000
VERSION     DAKPJH010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.165"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            299..763
                     /gene="accB"
                     /locus_tag="OY092_002526"
     CDS             299..763
                     /gene="accB"
                     /locus_tag="OY092_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HCX1077437.1"
                     /translation="MNFKEIKELIEILDKSTLTEINIEDTKGKVTLKKEKETEIITPQ
                     ISQMPVEAAAMPMPQVQSTDSNKTEAPKPTSDNHKTINAPMVGTFYKSPSPDEEAYVQ
                     VGDTVSNETTVCILEAMKLFNEIQAEISGEIVEILVEDGQMVEYGQPLFKVK"
     gene            763..2118
                     /gene="accC"
                     /locus_tag="OY092_002527"
     CDS             763..2118
                     /gene="accC"
                     /locus_tag="OY092_002527"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HCX1077438.1"
                     /translation="MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIA
                     DEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFI
                     GPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAQKIGYPVIIKATA
                     GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYG
                     NVIHLGERDCTIQRRMQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFI
                     YDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGEVLPYKQEDIKLTGHA
                     IEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIH
                     EPTRDEAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMNDE
                     G"
     gene            2133..2495
                     /locus_tag="OY092_002528"
     CDS             2133..2495
                     /locus_tag="OY092_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HCX1077439.1"
                     /translation="MVKVTDYSNSKLGKVEIAPEVLSVIASIATSEVEGITGHFAELK
                     ETNLEKVSRKNLSRDLKIESKEDGIYIDVYCALKHGVNISKTANKIQTSIFNSISNMT
                     AIEPKQINIHITQIVIEK"
     gene            2555..2944
                     /gene="nusB"
                     /locus_tag="OY092_002529"
     CDS             2555..2944
                     /gene="nusB"
                     /locus_tag="OY092_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HCX1077440.1"
                     /translation="MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEF
                     IHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMN
                     EAVELTKQFSDDDHYKFINGVLSNIKK"
     gene            2961..>4059
                     /locus_tag="OY092_002530"
     CDS             2961..>4059
                     /locus_tag="OY092_002530"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HCX1077441.1"
                     /translation="MSDYLSVSALTKYIKYKFDQDPHLQSVLIKGELSNFKKHSSGHL
                     YFNVKDKESVISAMMFKGSASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLD
                     GIGNLYQKLEALKKKLTEEGCFDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSR
                     FPLAEQIQISTLVQGEKAKDDIIEKIEYADSLGVDTIIVGRGGGSIEDLWNFNEEAVV
                     RAIYNCKTPIISAVGHETDFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFT
                     LTRFIKKHLEQQRKHVEHLSSYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQR
                     HRLMLLQQRYNLKALLSSVNQEQQNNLQLTNQ"
BASE COUNT         1536 a          585 c          757 g         1181 t
ORIGIN      
        1 aaaacataga catgagtaaa ggtatatatc tacatatcat attgttgagg attaaacata
       61 atagctaata aaaataacat tgatatgttt aactgaatgc ataaaatttt taatcaagag
      121 ttaagatgag tcaatgttaa gtaataaata cacaagtgtt tttaatttaa aatgtgtttt
      181 tattataact ttgggataga cttataatgt cgccagcaat atgaacatgc ttgaattgaa
      241 gagttgtctc aagtaaaata gacgggtaga tgaaaacaaa ctgaaggagt cagtaataat
      301 gaactttaaa gaaatcaaag aattaattga aattctggat aaatcaactt taacggaaat
      361 caatattgaa gatactaaag gcaaagtgac gcttaagaaa gaaaaagaaa ctgagattat
      421 cacgccacaa atttcacaaa tgccagttga agctgcggca atgcctatgc ctcaagtaca
      481 atcaactgat agcaataaaa ctgaagctcc aaagccaact tcagataatc acaaaacaat
      541 taatgcacct atggtaggta cattttacaa atcgccttct ccagacgaag aagcatatgt
      601 gcaagttggg gacactgttt caaatgaaac aacagtgtgt attttagagg caatgaaact
      661 atttaatgaa attcaagcag aaatttcagg tgaaattgtt gaaatcttag tagaagacgg
      721 acaaatggta gagtatggcc aaccgttatt taaggtgaaa taatgaaaaa ggttttaatt
      781 gcaaaccgcg gtgaaatcgc agttaggatt attcgcgctt gtcgtgattt aggcatccaa
      841 actgttgcaa tctattctga aggggataaa gatgcgctac atactcaaat tgctgatgaa
      901 gcatattgcg taggtcccac tttgtctaaa gattcatatt taaatattcc gaacatctta
      961 tctattgcaa cttctacagg ttgtgatggc gttcatccgg gttatggctt tttagctgaa
     1021 aatgctgact ttgcagaatt atgcgaagca tgccaattga agttcattgg accaagttat
     1081 caatctatcc aaaaaatggg tatcaaagat gttgctaagg cagaaatgat caaagccaat
     1141 gttccagttg ttcctggtag tgacggttta atgaaagacg tctcagaagc taagaaaatc
     1201 gcccaaaaaa ttggctatcc ggtcatcatt aaagctactg ctggcggtgg cggaaaaggt
     1261 atccgtgttg ctcgtgatga aaaagaactt gaaactggct tccgaatgac agaacaagaa
     1321 gctcaaactg catttggtaa tggtggactt tatatggaga aattcatcga aaacttccgc
     1381 catattgaaa tccaaattgt tggggacagc tatggtaatg taattcattt aggagaacgt
     1441 gattgtacaa ttcaaagacg tatgcagaaa ttagtggaag aagcaccttc cccaatttta
     1501 gatgatgaaa cacgtcgtga aatgggaaat gccgcagtgc gtgcagcgaa agctgtaaat
     1561 tatgaaaatg cgggaacaat tgagtttata tatgatttaa atgataataa attttatttt
     1621 atggaaatga atacacgtat tcaagtagaa catcctgtaa ctgaaatggt aacaggaatt
     1681 gatttagtta aattacaatt acaagttgct atgggtgaag tgttaccata taaacaagaa
     1741 gatattaaat taacaggaca cgcaattgaa tttagaatta atgctgaaaa tccttacaag
     1801 aactttatgc catcgccagg taaaattgag caatatcttg caccaggtgg atatggtgtt
     1861 cgaatagagt cagcatgtta tactaattat acgataccgc catattatga ttcgatggta
     1921 gcgaaattaa tcatacatga accgacacga gatgaagcga ttatggctgg cattcgtgca
     1981 ttaagtgaat ttgtggttct tggtattgat acaactattc cattccatat taaattattg
     2041 aataacgata tatttagaag cggtaaattt aatacaaact ttttagagca aaatagcatt
     2101 atgaatgatg aaggttaata ggaggtcaat ccatggtcaa agtaactgat tattcaaatt
     2161 caaaattagg taaagtagaa atagcgccag aagtgctatc tgttattgca agtatagcta
     2221 cttcggaagt cgaaggcatc actggccatt ttgctgaatt aaaagaaaca aatttagaaa
     2281 aagttagtcg taaaaattta agccgtgatt taaaaatcga gagtaaagaa gatggcatat
     2341 atatagatgt atattgtgca ttaaaacatg gtgttaatat ttcaaaaact gcaaacaaaa
     2401 ttcaaacgtc aatttttaat tcaatttcta atatgacagc gatagaacct aagcaaatta
     2461 atattcacat tacacaaatc gttattgaaa agtaatgtca tacctaattc agtaattaaa
     2521 taaagaaaaa tacaaacgtt tgaaggagtt aaaaatgagt cgtaaagaat cccgagtgca
     2581 agcttttcaa actttatttc aattagaaat gaaggacagt gatttaacga taaatgaagc
     2641 gataagcttt attaaagacg ataatccaga tttagacttc gaatttattc attggctagt
     2701 ttctggcgtt aaagatcacg aacctgtatt agacgagaca attagtcctt atttaaaaga
     2761 ttggactatt gcacgtttat taaaaacgga tcgtattatt ttaagaatgg caacatatga
     2821 aatattacac agtgatacac ctgctaaagt tgtaatgaat gaagcagttg aattaacaaa
     2881 acaattcagt gatgatgatc attataaatt tataaatggt gtattgagta atataaaaaa
     2941 ataaaattga gtgatgttat atgtcagatt atttaagtgt ttcagcttta acgaaatata
     3001 ttaaatataa atttgatcaa gatccacatc tccaatctgt actgattaaa ggtgagcttt
     3061 caaatttcaa aaagcattca agtggtcatt tatactttaa tgtgaaagat aaagaaagcg
     3121 ttataagtgc catgatgttc aaaggtagtg cttctaaatt aaacttcgaa cctaaagaag
     3181 gagatgaagt cttattagaa gcacgtgttt ctgtttttga acgtcgtgga aactatcaaa
     3241 tttatgtaaa taaaatgcaa ttagatggta tagggaactt atatcaaaaa ttagaagcat
     3301 taaagaaaaa attaactgaa gaaggttgtt ttgataaagc gaataagaaa tcaataccta
     3361 agtttccaaa aaaaattgca gttttaacag cgagtacagg tgccgcaatt cgagatatcc
     3421 attcaacgat aaatagtcgt ttcccattag ctgaacaaat acaaattagt actttggttc
     3481 aaggtgaaaa agcaaaggac gacattattg aaaaaattga atatgcagat agtttaggtg
     3541 tagataccat tattgtaggt cgaggcggtg gatccataga agatttatgg aattttaacg
     3601 aagaagctgt cgtccgtgca atatataatt gtaagacacc gattatatca gcagtaggtc
     3661 atgaaacaga ctttacatta agtgattttg ctgcagacat cagagctgcg actccaactc
     3721 aagctgctgt tattgcaaca ccagaccaat atgaattgct gcaacaaata cagcaatatc
     3781 agtttacatt gactcgtttc atcaagaaac atttagaaca acaacgtaaa catgttgaac
     3841 atttgtcatc gtattacaag tttaaacaac caactttatt gtatgatcaa cagatacaac
     3901 gtcgagatga tttagaaaag agactgaaac aacaaattca ggcaactttt gaacaacaga
     3961 gacatcgatt aatgctgttg caacaacgct ataatttaaa agcgttacta agtagtgtta
     4021 atcaagaaca acaaaataat cttcaattga caaaccaac
//
LOCUS       DAKPJH010000163         3848 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.166, whole genome shotgun sequence.
ACCESSION   DAKPJH010000163 DAKPJH010000000
VERSION     DAKPJH010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.166"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            236..439
                     /locus_tag="OY092_002531"
     CDS             236..439
                     /locus_tag="OY092_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077442.1"
                     /translation="MQLSHSVKVAISIYLALIFITFTSYLVIILYTSMTGHDVSHFVL
                     DSQHSHHGSLTQKHLSLPEISFK"
     gene            622..1557
                     /locus_tag="OY092_002532"
     CDS             622..1557
                     /locus_tag="OY092_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCX1077443.1"
                     /translation="MRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINV
                     DWYVTARLVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMA
                     SINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFS
                     NLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWH
                     IDITKWDISIILFLIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSL
                     WLHVAFKPFQIVGIILIMILILLLSLKRQPEALDE"
     gene            complement(1639..2607)
                     /locus_tag="OY092_002533"
     CDS             complement(1639..2607)
                     /locus_tag="OY092_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCX1077444.1"
                     /translation="MRKKWSTLAFGFLVAAYAHIRIKEKRSVKSYMLEQGIRLSRAKR
                     RFMYKEEAMKALEKMAPQTAGEYEGTNYQFKMPVTVDKHYGSTVYTVNDKQDKHQRVI
                     LYAHGGAWFQDPLKIHFEFIDELAETLNAKVIMPVYPKIPHQDYQATYVLFEKLYHDL
                     LNQVADSKQIVVMGDSAGGQIALSFAQLLKEKHIVQPGHIVLISPVLDATMQHPEIPD
                     YLKKDPMVGVDGSVFLAEQWAGDTPLDNYKVSPINGDLDGLGRITLTVGTKEVLYPDA
                     LNLSQLLSAKGIEHDFIPGYYQFHIYPVFPIPERRRFLYQVKNIIN"
     gene            complement(2728..3084)
                     /locus_tag="OY092_002534"
     CDS             complement(2728..3084)
                     /locus_tag="OY092_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCX1077445.1"
                     /translation="MVKQLNSVEAFREFIHQYPLAVVHVMRDQCSVCHAVLPQIEDLM
                     QSYPNVPLAVINQSQVEAIAGELNIFTVPVDLIFMNGKEMHRQGRFIDMQRFEHHLKQ
                     MNDSVNNDVDEHEYRK"
     gene            complement(3126..3536)
                     /locus_tag="OY092_002535"
     CDS             complement(3126..3536)
                     /locus_tag="OY092_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HCX1077446.1"
                     /translation="MTTEGLLVAEKEIEVNGYDIDAMGVVSNIVYIRWFEDLRTAFIN
                     QHMNYSTMINQGISPILMKTEAEYKVPVTIHDKPVGRIYLVKASKMKWVFQFEIVSAH
                     GVHCIGTQTGGFYRLSDKKITSVPQVFQDILATK"
BASE COUNT         1158 a          700 c          599 g         1391 t
ORIGIN      
        1 tttgtttttg tgctgtgttt ataaaaccgc acactatatt caaaaataac ttattacaca
       61 tatatttgca ataagataat taaagtagga tattattttt agttttctga taggaatgat
      121 tatagtctat aggttgaatc tttacttttt ttaaagctaa atttacatca acttaacaat
      181 ggctgtttat actgaagatg aaaatattta gtataactta gtggaggcga taaagatgca
      241 attgagtcat tccgttaaag ttgcaatttc tatctattta gcacttatct ttataacgtt
      301 cacttcttat ttagtcatta ttttatatac gagtatgact ggacatgatg tatcacattt
      361 cgttttagat agtcagcatt ctcatcatgg atctcttacg caaaaacatt tgagtcttcc
      421 tgaaatctca tttaaatagt ttatcctctg tgtttcaaca ttcatttccc atatcgattc
      481 atttatctat catctagacc actacatctt agatgatttt tttattttct catttcactc
      541 tttcttaaaa gtcgatataa tgaattaaat cattatcata caccgacata ttttatgttg
      601 ttggtgttaa gttttaaagg ggtgagatac ttggcgaaca atcattcagc tttgcgttta
      661 aaaggaatta tacttgccat tgtcggtgct tgtttatggg gattaggtgg tactgtttct
      721 gatttcttgt tcaaatataa gaatattaat gtcgattggt acgtcactgc tcgacttgta
      781 gtcagtggtg ttttcttact tattatgtac aaaatgatgc aacccaaacg ttcaatattt
      841 agcgtattcc aagatcgacg tatgttaggc aaattactta tcttcagtat actgggcatg
      901 ttagttgtac aatatgctta tatggcatct attaatacag gtaatgctgc gattgcaaca
      961 ttactacaat acattgcgcc agtttatatt attatttggt ttgtcataag aggcgttgca
     1021 aaactaacat tatttgatgt gcttgctatt atcatgacac tattaggaac atttttatta
     1081 ttaacgaatg gttcattttc taatttagtc gtcaatcctg caagtttatt ctggggtatt
     1141 ttagctggtg tagcactcgc tttttacaca atttatcctt cagacctact taaccgcttc
     1201 ggttcgattc taattgtcgg gtgggcaatg cttatttctg gtgttgcgat gaatttacgc
     1261 catccaattt ggcacattga tatcactaaa tgggacatat caattatatt atttttaatc
     1321 tttggtatta tcggtggtac cgcactcgca ttttatttct ttatcgacag tttacaatac
     1381 atatcagcga aagaaacaac attattcgga actgttgaac ctgtcgtagc cgttatcgca
     1441 agcagtctat ggttacatgt ggcattcaaa ccatttcaaa tcgtaggcat cattcttatt
     1501 atgattttaa ttttattact atcacttaaa agacaacctg aagcattaga tgaataagaa
     1561 aactctgata atcactttag caagtaacta ttatttaaca atgtagctac cttgtaggtg
     1621 atatcagagt tttttatttt aattaataat atttttcact tggtataaaa agcgtcggcg
     1681 ctctggtatc ggaaatactg gataaatatg gaattggtaa tatccaggta taaagtcatg
     1741 ttcgatacct ttcgcactca acaattgcga taagttcaaa gcatctgggt acagtacttc
     1801 ttttgtgcca acagttaatg taatacgacc taaaccatct aagtcaccat taattggtga
     1861 tactttgtag ttatctaaag gcgtgtcccc tgcccattgt tcagctaaga acacactgcc
     1921 atccacacct accattgggt ctttctttaa gtagtcagga atttcaggat gctgcatcgt
     1981 tgcatctaaa actggtgaaa ttaatacaat atgtcctggt tgcacaatat gtttttcttt
     2041 taacaattga gcaaatgata aagcaatttg accgcccgca gagtcaccca ttacaacgat
     2101 ttgtttagaa tctgctactt gattcaataa atcatggtac aacttttcaa aaagtacata
     2161 cgtcgcttga taatcttgat gcggaatctt cggatatact ggcatgatga ctttagcatt
     2221 gagtgtttct gcaagttcat caataaattc gaaatgaatt ttgagtgggt cttggaacca
     2281 tgcccctcca tgtgcatata atataacgcg ttgatgctta tcttgtttat cgttaacggt
     2341 ataaacggtt gaaccgtagt gcttatccac tgttactggc atcttaaact gataattggt
     2401 gccctcatat tcacctgctg tctgtggcgc cattttttct aatgctttca tcgcttcttc
     2461 tttatacata aaacgacgct tagctctaga taatcgtata ccttgttcta acatataact
     2521 tttcacactg cgtttttctt taattctaat atgtgcgtat gctgctacta aaaatccaaa
     2581 cgcaagtgta gaccattttt tacgcatttg tcgtcactcc tctttgatga tttctactat
     2641 agtattaatg taccatgctg attcttatta ctaccaatat ttactgggaa ataagttatg
     2701 atgtctacat aatcttagca atgctaatca tttgcgatat tcatgctcat cgacatcgtt
     2761 attcacacta tcattcattt gcttaagatg atgttcaaaa cgttgcatat cgataaaacg
     2821 cccttgacga tgcatttctt ttccattcat aaaaattaaa tccacaggta cagtgaaaat
     2881 atttaattct ccagcaatag cttccacctg actttgatta atcacagcta atggcacatt
     2941 gggatatgat tgcatcaagt cttcaatttg tggtaaaacg gcatgacaca cgctacactg
     3001 atcgcgcatg acatgtacga ctgctaacgg atattgatga ataaattcac ggaatgcttc
     3061 gacactattt aattgcttaa ccatttcgaa caccttctta ctttttatat tttaaaatga
     3121 agtcattatt ttgttgctaa aatgtcttga aacacttgtg gcacagaggt tatcttctta
     3181 tcgctcaatc tgtaaaaacc gcctgtctgt gtaccaatac aatgcacgcc atgtgcggac
     3241 acaatttcaa actgaaacac ccatttcatc ttgcttgctt taactaagta aatacgacct
     3301 actggtttgt catgtattgt gacaggtact ttatactctg cttccgtttt cataagtata
     3361 ggtgaaatgc cttgattgat cattgttgag taattcatgt gctgattaat aaatgctgtt
     3421 ctcaaatctt cgaaccatct aatataaacg atattactaa cgacacccat cgcatcaatg
     3481 tcgtaaccat tcacttcgat ttctttctct gcaactaata gaccttctgt tgtcataatg
     3541 acaaatctcc ttatcttaca aatagattta aaatcatgtt aatttatttt tattactttc
     3601 atgataaaaa tacaagcaat tgaactttat tacggaaaat caaacttttc aatgagacta
     3661 ttaatttggc tagtcgcgaa gatgcatttt tctaaaatgt gacaaaaaca taagcaatgt
     3721 tttctatatc taacactaat atttaactta ttatcatcaa cacatctgct atacatcatt
     3781 gcgcactaaa aacaggctgg aacataaatc cctaaaaaaa cagcagtaag atattttcta
     3841 attgaaaa
//
LOCUS       DAKPJH010000164         3838 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.167, whole genome shotgun sequence.
ACCESSION   DAKPJH010000164 DAKPJH010000000
VERSION     DAKPJH010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.167"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            224..574
                     /locus_tag="OY092_002536"
     CDS             224..574
                     /locus_tag="OY092_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YppE family protein"
                     /protein_id="HCX1077447.1"
                     /translation="MNDVVESLIYEVNNMQQNFENVKSQQQDHDFYQTVKPYTEHIDS
                     MLNEIKLHREFIIEVPYMNSRKFELLIANIEQLSVECHFKRTSRKLFIEKLKSVQYDL
                     QNILDGVTKEGTHG"
     gene            567..1130
                     /locus_tag="OY092_002537"
     CDS             567..1130
                     /locus_tag="OY092_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HCX1077448.1"
                     /translation="MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGL
                     EWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITPFQGHTEKWNEHNQSKYANIIKH
                     ADYVDSIFHTPYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
                     NYTCDIVTFDELTAFINDLQWSEDQSF"
     gene            1144..1488
                     /gene="gpsB"
                     /locus_tag="OY092_002538"
     CDS             1144..1488
                     /gene="gpsB"
                     /locus_tag="OY092_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HCX1077449.1"
                     /translation="MSDVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIIADYQK
                     MADMNNEVVKLSEENHKLKKELEELRLRVATSRPQDNKSFSSNNTTTNTSSNNVDILK
                     RISNLEKAVFGK"
     gene            1551..1930
                     /gene="rnpB"
                     /locus_tag="OY092_002539"
     ncRNA           1551..1930
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="OY092_002539"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            2139..3284
                     /locus_tag="OY092_002540"
     CDS             2139..3284
                     /locus_tag="OY092_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HCX1077450.1"
                     /translation="MFQLLAVCPMGLEAVVAREIQELGYETNVENGRIFFEGDASAIV
                     KANLWLRTADRIKIVVGRFNATTFDELFEQTKALPWESIIDKEGNFPVQGRSVKSTLH
                     SVPDCQAITKKAIVERLRRAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNR
                     RGYRLAQGEAPIKETLAASLIRLANWKGDTPLIDPFCGSGTIAIEACLIAQNIAPGFN
                     REFVSEQWNIMPANIYDDYRDEADKMADYDKEIEVYASDIDPEMVEIAKRNAEEVGLS
                     DIIKFSVKDVNTLTIDTEEPVALIGNPPYGERIGDREEVEEMYRYIGKLMKQHPFLST
                     YILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKTERKTIEN"
     gene            3368..3700
                     /locus_tag="OY092_002541"
     CDS             3368..3700
                     /locus_tag="OY092_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HCX1077451.1"
                     /translation="MGKKMGLGLSIALVVIGIAVVCLMIFSSQKTTYFGYMNSNTNAE
                     KVVSEKDGLVKHNIKVEPSNDFKPKKGDFVKLVSKDGGKTFYKQEIVKHDDVPHGLMM
                     KIHDMHMN"
BASE COUNT         1432 a          499 c          729 g         1178 t
ORIGIN      
        1 tcagcagggg tgtatttgat ttaaatgatt ttattagatt ataagtattt tcatcgtata
       61 acaacataca cgataaaatt ttgtatttat ataggaagtt tttagattta cttgatttaa
      121 cagataacac atttaaaaaa tagttaaatc aaattatata gagtgttaaa acatgacgaa
      181 tacagtatat tgtgataaat taaaaaatgt aggaggcgtc ctcatgaatg atgtagtcga
      241 atcactaatt tatgaagtta acaacatgca acaaaatttt gaaaatgtga aatcacaaca
      301 acaagatcat gatttttacc aaactgtaaa gccatatact gaacatattg atagcatgct
      361 caatgagatc aaattacatc gtgaatttat tatagaagta ccttatatga attcaaggaa
      421 atttgagcta ctgattgcta acattgaaca actttctgtc gaatgtcatt ttaagcgaac
      481 aagtcgaaag ttatttattg aaaagcttaa aagtgttcaa tatgatttac aaaatatatt
      541 agatggcgta acaaaagagg gtactcatgg ttaaaacagt ttatgtaaca ggttacaaat
      601 cattcgaatt aaacattttt aaagatgacg cacctgaagt acattattta aaacaattta
      661 taaaacataa aattgaacaa ctgttggatg aaggattaga atgggtgtta atacaagggc
      721 aaatgggtat agaattatgg actgcagaag ttgttattga attacaacga acatatgatt
      781 cgttaaagtt tgctgtaatt acaccgttcc aaggacatac agaaaagtgg aatgaacata
      841 atcaaagtaa gtatgccaac ataattaagc atgcagatta tgttgatagt atttttcata
      901 cgccgtatca aggtcctttt caatttaaac aagcagatca atttatgctt gaacattcgg
      961 accaaacatt gctcatttat gatgaggaac aagaggcgag tcctaagttc ttcaagcaga
     1021 tgttagttga ttttatggat aaaacaaact atacttgtga tattgtgacg ttcgatgaat
     1081 taacagcatt catcaatgac ttacagtggt ctgaagatca aagtttctaa tgaggtggaa
     1141 aaaatgtcag atgtttcatt gaaattatca gcaaaagata tttatgaaaa agattttgaa
     1201 aaaacgatgg ctcgtggcta tagaagagaa gaagtagatg catttttaga tgacattatt
     1261 gctgattatc aaaaaatggc cgatatgaat aatgaagttg taaaattatc agaagagaat
     1321 cataaactta aaaaagaatt agaagaatta agactacgtg tagcaacatc tagacctcag
     1381 gacaataaaa gtttttcttc gaataataca acaacaaata catcttcaaa taatgtagat
     1441 attttaaaac gtatttcaaa cttagaaaaa gctgtatttg gtaaataatt actaaatata
     1501 aaagtttaac tgtcttacta ataatgacta tgttataatt ttaaaagtga tattttgggt
     1561 aatcgctata ttatatagag gaaagtccat gctcacacag tctgagatga ttgtagtgtt
     1621 cgtgcttgat gaaacaataa atcaaggcat taatttgacg gcaatgaaat atcctaagtc
     1681 tttcgatatg gatagagtaa tttgaaagtg ccacagtgac gtagctttta tagaaatata
     1741 aaaggtggaa cgcggtaaac ccctcgagtg agcaatccaa atttggtagg agcacttgtt
     1801 taacggaatt caacgtataa acgagacaca cttcgcgaaa tgaagtggtg tagacagatg
     1861 gttatcacct gagtaccagt gtgactagtg cacgtgatga gtacgatgga acagaacatg
     1921 gcttatagaa atatcactac tagtttagct ctcctagatg atggagagct tttttcatga
     1981 aaagaacact taaaattaac gccttgtctt gatataatga cactgccttg ttttaaaata
     2041 ataagcgaat gcgttaatgt atcagcgatt aaatttgttg gaaatgtata aaaaacacaa
     2101 gctaagaata aaatacctgt ataaaaggag aatcatatat gtttcaatta cttgcagttt
     2161 gtccgatggg attagaagct gttgttgcta gggaaattca agaattaggc tatgaaacaa
     2221 atgttgaaaa tggtcgtata ttttttgaag gagacgcaag tgcaattgta aaggcaaatt
     2281 tatggttgcg cacagcagac cgaatcaaaa ttgttgttgg acgttttaac gcaacaacgt
     2341 ttgacgaatt attcgaacaa accaaagcgc tcccttggga atctattatt gataaagaag
     2401 gtaacttccc agttcaaggt agaagcgtta aatcaacact acatagtgtg ccagattgtc
     2461 aggcgataac taagaaagct attgttgaac gattacgtcg tgcatataac gaaaagggtt
     2521 ggttaaatga atcaggtgcc aaataccctg ttgaagttgc cattttaaaa gataatgtat
     2581 tattgaccat cgacacatca ggttctggtt tgaacagacg tggatataga ttagcacaag
     2641 gtgaagcacc aattaaagaa acgttggcag caagtttaat ccgtctcgca aactggaaag
     2701 gtgatacacc tttaattgat ccattttgcg gttcaggtac tatagctata gaagcttgtt
     2761 taattgctca aaatatcgca cctggtttta atcgcgaatt cgtatcagag caatggaaca
     2821 tcatgccagc aaatatttat gatgattacc gtgatgaagc ggataagatg gctgattatg
     2881 ataaggaaat cgaagtatat gcttctgata ttgatccaga aatggtagag attgctaagc
     2941 gtaatgctga agaagttggg ttgtctgata ttattaaatt tagtgtaaaa gatgtcaata
     3001 cattaacaat tgatacagaa gaaccggtgg cgttaattgg aaatcctcca tatggtgaac
     3061 gtattggtga tcgtgaagaa gttgaagaaa tgtaccgtta tattggtaaa ctaatgaaac
     3121 aacatccatt tttatctaca tacattttaa caagtaataa agaatttgaa tatttagtag
     3181 atcgtaaagc aacgaagcga cgtaagttat ttaatggata tatagaatgt acttattatc
     3241 aatactgggg taaaaagaca gaacgtaaaa ctatcgaaaa ctaaagtgtt tataatgcgt
     3301 gactaaaatt agtaataatt atgttctcat gataataggt atttttgaaa aatggaggag
     3361 tctataaatg ggtaaaaaaa tgggtctagg tttatctata gcattggttg ttattggtat
     3421 tgccgttgta tgtttaatga ttttttctag tcaaaaaacg acttattttg gttatatgaa
     3481 tagtaataca aatgcagaaa aagttgtcag tgaaaaagat ggattagtca aacataatat
     3541 caaagtagaa ccatctaatg atttcaagcc gaaaaaagga gactttgtaa aattagtttc
     3601 taaagatggt gggaagacat tttataaaca agagattgtt aaacatgatg acgtcccaca
     3661 cggtttaatg atgaaaattc acgacatgca tatgaattaa taaaaaagca tctataacgt
     3721 aatttggaag aagtagagtt atcttcttat gcgttttaga tgctttttta tcttcaaatt
     3781 caaaaaatcg tactgatgga aaagtaaaaa actttttcat cagtacgatt tattatag
//
LOCUS       DAKPJH010000165         3817 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.168, whole genome shotgun sequence.
ACCESSION   DAKPJH010000165 DAKPJH010000000
VERSION     DAKPJH010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.168"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(294..1940)
                     /locus_tag="OY092_002542"
     CDS             complement(294..1940)
                     /locus_tag="OY092_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HCX1077452.1"
                     /translation="MNSSSPENPNGKKYSPVFIYSAIVVAIVVLLGAFLPEQFNYVTN
                     NIKMWITEKLGWYYLILTTIIVFFCIFLIFSPIGKLKLGKPNDKPEFNTISWFAMLFS
                     AGMGIGLVFYGAAEPMAHFATPPTADPKTTEAYTEALRSTFFHWGFHAWAVYGVVALA
                     LAYSQFRKGEPGLLSRTLRPLLGDKVEGPIGIFIDVLSVFATIVGVAVSLGMGALQIN
                     GGLHYLFNVPNNTFVQAIIIIVVTILFIASAWSGLSKGIQYLSNLNIGLGTILMVAAL
                     IVGPTVLILNMLTSSTGSLLNTFLFNSFDTAALNPQKREWMSSWTLYYWGWWLSWSPF
                     VGVFIARVSKGRSIREFISGVLLVPAIVSFVWFSVFGVLGIETGKKHKEIFDMTPETQ
                     LFGVFNHVPFGIVLSLIALLLIASFFITSADSATFVLGMQTTFGSLNPSSMVKVVWGI
                     SQALIAFVLLLAGGGNGAEALNAIQSAAIISAFPFSFVVILMMVSFYKDANQERKFLG
                     LTLTPNKHRLQEYIKSQQEDYESDILEKRQSRRNIEKKDN"
     gene            2144..2506
                     /gene="mscL"
                     /locus_tag="OY092_002543"
     CDS             2144..2506
                     /gene="mscL"
                     /locus_tag="OY092_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HCX1077453.1"
                     /translation="MLKEFKEFALKGNVLDLAIAVVMGAAFNKIISSLVENIIMPLIG
                     KIFGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKEEAEEEAVV
                     EENVVLLTEIRDLLREKK"
     gene            complement(2577..3446)
                     /locus_tag="OY092_002544"
     CDS             complement(2577..3446)
                     /locus_tag="OY092_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001810626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HCX1077454.1"
                     /translation="MEMSRLNLTDDNDIDEIIAWRGEQEELEQKRDTYKKRYHEFEME
                     IARLESLTKDKELLDSDKLKDEYELKKGKMNTLIDEYSAVHYQCQNNINKTQSIVSHI
                     NYLNQELKDQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRY
                     QLIRREAVSHGLSGLEIDVFDLHSNKSRHISSLSGGETFQSSLALALGLSEIVQQQSG
                     GISLESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVK
                     SDQYQSSTRFKRN"
BASE COUNT         1278 a          671 c          547 g         1321 t
ORIGIN      
        1 atagaatatt gatttatgtc ccagcctgag ttaatttttt ataaaagtat agttaatttg
       61 cgtttatacc gtcaaacttc actttagctt tgtcaaaccc ctttctatta agttgtcaga
      121 aataaaccta tcttaaaata taaaaaaatc gagaattcgt agtttaataa cgaaattctc
      181 gttcttatcc ttttgaatat actcaatttt ccacaaaaac aaacaagtag tatatctgtt
      241 ctagctacta gaatgacata ctacttgtta tttaaatact taactaaatt ttattagtta
      301 tcttttttct ctatatttct acgtgactga cgcttttcaa gaatgtcaga ttcataatct
      361 tcttgttgac tcttgatata ttcttgtaag cgatgtttat tcggagtcaa tgttaaacct
      421 aggaatttac gttcctggtt cgcatccttg tagaaactta ccatcatgag tatgacgaca
      481 aaggagaatg ggaatgcact tataattgca gcactttgaa tcgcatttaa agcttcagcg
      541 ccgttaccgc caccagctaa taaaagtaca aatgctatta aggcctgtga aattccccaa
      601 acaactttta ccatactaga tggatttaat gaaccaaatg ttgtttgcat tcctaataca
      661 aatgttgctg agtcagcaga tgtaataaag aatgatgcaa ttaataataa tgcaatcaac
      721 gataaaacaa tgccaaatgg cacatgatta aacactccaa atagctgtgt ttcaggagtc
      781 atatcaaaaa tttctttgtg tttcttacct gtctcgatgc ctaatacacc aaagacacta
      841 aaccaaacaa aactaacaat tgctggaact agcaagacac cagaaatgaa ctctctaatt
      901 gaacgtcctt ttgaaactcg tgcaataaac actccaacga atgggctcca acttaaccac
      961 caaccccagt aataaagtgt ccatgaagac atccattcac gtttttgagg atttaaagct
     1021 gctgtatcaa aactattaaa caagaatgtg tttagtaaac tacccgtaga gctagttaac
     1081 atatttaaaa taagaacagt tggtccaaca attaaagcag ctaccattaa aatagtacct
     1141 aaaccaatgt tcaagttact taagtattga atacctttac ttaatccaga ccatgcactt
     1201 gctataaata agatagtaac aacaatgatg ataatcgctt gtacaaacgt attgtttgga
     1261 acattgaaca agtaatgtaa accaccatta atttgtagag cacccatacc taacgaaacg
     1321 gctaccccaa cgattgtcgc aaatacagat aaaacgtcaa taaaaatccc aataggacct
     1381 tctactttat cacctaaaag aggacgtaaa gttctagata ataaacctgg ttcaccttta
     1441 cggaattgcg aatatgccaa cgctaacgca acaacaccat aaacagccca agcatggaat
     1501 ccccaatgga aaaatgttga acgtagagct tcagtataag cttcagtagt tttgggatct
     1561 gctgtaggtg gcgtagcaaa gtgcgccatc ggttcagctg caccataaaa caccaaacct
     1621 atccccatac cagcactaaa caacatagca aaccatgaaa ttgtattaaa ctcaggtttg
     1681 tcatttggtt tacctagttt aagttttcca ataggactaa aaataaggaa tatacagaag
     1741 aaaacgataa tcgtagtaag aataagataa taccaaccta acttttctgt aatccacatt
     1801 ttaatattat tggtaacata gttgaattgt tcaggtaaaa atgcaccaag taatacgact
     1861 atagcaacaa caattgcact atagatgaag actggtgaat acttctttcc atttggattc
     1921 tctggtgaag aagaattcat aattaattac tcccttcaat tctatattta attttatgta
     1981 gtagaataaa aatattatct aaacatttta ttcaataact cacgcacctt tataggataa
     2041 caaaggtctt tgcgataatc aaattttctt gaataatcta ttttctaatt tttttatttg
     2101 ttgtataatt gaggttacat ttaaaaaaga gaggttgagt gtaatgttaa aagaattcaa
     2161 agagttcgcc ttaaaaggta acgtcttaga tttagcaatt gctgttgtga tgggtgcagc
     2221 tttcaacaag attatatctt cattagtaga aaatatcatt atgccattaa ttggtaaaat
     2281 tttcggatca gttgattttg ctaaagaatg gtcattctgg ggtattaaat acggtttatt
     2341 tatccaatct gttatcgact ttattatcat cgcgtttgct ttattcatct ttgttaagat
     2401 tgcaaataca ttaatgaaga aagaagaagc cgaagaagaa gcagttgtgg aagaaaatgt
     2461 tgtgttatta actgaaatca gagatttatt acgtgagaaa aaataatttt taaataaaaa
     2521 gagatgggct aaggttgttc tatacattcc aaagtaccat ctctattttt tatgttttaa
     2581 tttcttttga atcttgttga actctgatat tgatctgatt tcacttctaa aactaaaggt
     2641 attctatttt tcaattcgct cacatgtgaa ataatcccaa ccattctacc agttgattta
     2701 agatttaata aagtgtctaa cgctgtttca agcgtttctt gatctaatgt accgaatcct
     2761 tcatcaataa atattgattc tagtgaaata cctcctgatt gctgctgtac aatttcgctt
     2821 aaccctaaag ctaatgcaag cgacgattgg aaagtttctc cacctgataa cgagctaata
     2881 tgtctagact tatttgaatg caaatcaaat acatcaattt ctaggccact aagaccatga
     2941 gaaaccgctt ctcgcctaat tagttggtat cgattatctg acattgttgc taatctcaga
     3001 tttgcttgag caataatttg atctaaatag taaattaaga caaagttttc caatgtaaga
     3061 tttttgttat tcttaccact gacaatttca gccaattgaa atatttcttg ttgatccttt
     3121 aattcttgat ttaagtaatt aatatgcgaa actatagatt gtgttttatt aatattattt
     3181 tgacattgat aatgaacagc agagtattca tctatcagtg tattcatctt tccttttttt
     3241 agctcatatt catcttttaa tttatcagag tccaataact ctttatcctt agttaatgat
     3301 tctaacctag ctatttccat ttcaaattca tgataacgtt ttttataagt atcccttttc
     3361 tgctctaatt cctcttgctc gcccctccag gctattattt catctatatc attgtcatca
     3421 gttaaattca gcctcgacat ttccatttca atagactgtt cattcaattc taagtcatta
     3481 ttgtaagttt ctagttgatt ttcataatga tttagattat tttgctcaat tgactttctt
     3541 tgagacaatt gcattaactt atcttcaatc tcctttgaga gttcttgatg ctgattcaca
     3601 tcttgaacat acttcttata atccacctca aaattagtga tattattata tttcgagagt
     3661 gtttcaaatt cagtgatgag atctcgacat aatttcaact cagattcatt tttatttaga
     3721 cgcaattgtt tattatgaat ttgcaacgtt agattatctt tttcttcttt catttgttct
     3781 ataaatttat taagatctct ttgattattc aatgcat
//
LOCUS       DAKPJH010000166         3763 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.169, whole genome shotgun sequence.
ACCESSION   DAKPJH010000166 DAKPJH010000000
VERSION     DAKPJH010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3763
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.169"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..207)
                     /locus_tag="OY092_002545"
     CDS             complement(<1..207)
                     /locus_tag="OY092_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCX1077455.1"
                     /translation="MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLS
                     KGFPLLTTKKVSFKLVATELLWFIK"
     gene            complement(631..1068)
                     /locus_tag="OY092_002546"
     CDS             complement(631..1068)
                     /locus_tag="OY092_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HCX1077456.1"
                     /translation="MNAYDAYMKEIAQQMRGELTQNGFTSLETSEAVLEYMNQVNADD
                     TTFVVINSTCGCAAGLARPAAVAVATQNEHRPTNTVTVFAGQDKEATATMREFIQQVP
                     SSPSYALFKGQDLVYFMPREFIEGRDINDIAMDLKDAFDENCK"
     gene            complement(1084..2208)
                     /locus_tag="OY092_002547"
     CDS             complement(1084..2208)
                     /locus_tag="OY092_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HCX1077457.1"
                     /translation="MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQPRFINQ
                     LLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKAAFSGESQVLESGKDPQIDKHFG
                     EIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTEHDNIVFMRKWLDLGN
                     RYGNIEEVMDGVLEEVLATYPESQLPVLVKHALEENHAANNYHFYRHVSLDEYHATDN
                     WKTRLRMLNHFPKPTFEDIPLLDLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLR
                     DKSPAVRRTAGDCISDLGYPEALPEMVLLLDDSQKIVRWRAAMFIFDEGNAEQLPALK
                     AHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI"
     gene            complement(2246..2497)
                     /locus_tag="OY092_002548"
     CDS             complement(2246..2497)
                     /locus_tag="OY092_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU N-terminal domain-containing protein"
                     /protein_id="HCX1077458.1"
                     /translation="MQIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFIND
                     ILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE"
     gene            complement(2509..2703)
                     /locus_tag="OY092_002549"
     CDS             complement(2509..2703)
                     /locus_tag="OY092_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HCX1077459.1"
                     /translation="MSRILTFSEQNALAKIDDLMNTYCNQCPIKTRLRKLEGKTKSHH
                     FCINECSIGKEIKQLGNELQ"
     gene            2948..3652
                     /locus_tag="OY092_002550"
     CDS             2948..3652
                     /locus_tag="OY092_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HCX1077460.1"
                     /translation="MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQ
                     VIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQL
                     SLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTF
                     FIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIA
                     KSFYRKGKIDKLDQGY"
BASE COUNT         1164 a          654 c          565 g         1380 t
ORIGIN      
        1 tttaatgaac cataataatt cggttgctac taatttaaaa gaaactttct ttgtcgttaa
       61 tagtggaaat cctttagata agtcaaagcg aagttgatga ccaaatttcg aaatcgtacc
      121 tgtatttgtg cgatcatttc gtgtatttcc tatttctaaa acttcttcac aaagactgtg
      181 atatgctgca tcaaatgaat tcaacatatg cgataacacc tcattttcat tatttatagt
      241 atgtatattt agtttgatat aatttaactt tatgtagcat tttgttatca ctcattttag
      301 gaatgtgata ttaatatcat ggattccgtt acttaattta taaaatgctg attaagtacc
      361 taccacatcg taaagtgata aatgtttcca attgctaatt gtttacccaa atctataact
      421 ttaatgctaa aaaattttaa aaaagaggtt aacacatgat ttgaatatta tgtttgatct
      481 cctattaaaa cagttaaatt tatagaaaat atagttgaag tgtacggact ttatataaca
      541 aatagaatac aactaaattc tctattttca atgacagaca ccatttttaa tattatagaa
      601 tgtgttaacc tttatattta tttatgtgta ctatttacaa ttttcgtcaa aggcatcctt
      661 taagtccatt gcaatgtcat taatatctct accttcgata aattctctag gcataaaata
      721 aactaaatct tgacctttga ataaagcata cgaaggacta gatggtacct gctgaatgaa
      781 ttctcgcata gtagcagttg cttctttatc ttgccctgca aaaactgtaa ctgtatttgt
      841 tggtctatgt tcattttgtg ttgcaacagc tactgcagct ggtcttgcta atccagctgc
      901 acagccgcat gtagagttaa taactacaaa agttgtgtca tcagcattta cttggttcat
      961 atactctaat actgcttcgc tcgtttctaa acttgtaaaa ccattttgag ttaattcgcc
     1021 acgcatttgt tgcgcaattt ctttcatata agcatcatat gcattcatat ttaattcctc
     1081 caattaaatt gttctgtttg ccatttgttt ccatactgaa ccaagtgctt catctccgtt
     1141 ttcaatacga gatatggcca tttcaatttg taatttaact tcaaacgcat tgtcattaat
     1201 atgggcttta agtgcgggaa gctgctctgc attaccttca tcaaagataa acatagcagc
     1261 acgccaccta acgatcttct gtgaatcatc taaaagtagc accatttctg gtagtgcctc
     1321 tggataccct aaatcactta tgcaatcccc tgctgtcctt cttacagcag gacttttatc
     1381 gcgaagtccc ttatataaat acggtaaaat ttctttactt tcaatcatgc ctaataatac
     1441 aatcgcttga cgtctaaccg gtactttttc atcagataaa gctaaatcaa gcagcggtat
     1501 atcttcaaaa gtcggctttg gaaaatggtt taacattcgc aatcgagtct tccaattatc
     1561 agtcgcatga tattcatcca aagagacatg tcgatagaaa tgataattat tagctgcgtg
     1621 attttcttct aaagcatgtt ttaccaatac gggcaactgt gattctggat aggtagctaa
     1681 cacttcttct aggacaccat ccattacttc ttcaatattt ccatagcgat ttcctaaatc
     1741 tagccattta cgcataaaaa caatattgtc atgttctgtt tgcgcttgag tcatatgatc
     1801 aacgtatgtt tgtggtaatt gttctcttaa ttcctggtca gcagaagtta gcttaatttg
     1861 atacggtata cccttaaaag ttaataattc agctttaatt tcaccaaaat gtttatcaat
     1921 ttgtgggtct tttccagatt ccaatacctg actttcacca gaaaaagcag ctttaatatc
     1981 aggtaatatg acttcccaat cagcttttgg tgccttatca acagctaaga agttcatgac
     2041 atgaaaaatg gaagtgatac catctataga taacaactga tttataaatc ttggttgatt
     2101 ttcttctact tttttataag tattagataa cttgtcttct cttgtatatg acaaaacaac
     2161 tttcattgta tttggacttg gcgttggctc tatacgtaaa atttccatat actttattcc
     2221 ccccgaatac tagttgatga aaaatttatt cgaatacagc ctctactttt ggcaatactg
     2281 tttcccaatt tgcgtcattt tctttatcta ctgaaataaa gtccataaca tggaaaattg
     2341 atttaacgcc ttcaaccttt aagatgtcat taataaatgc tggctgtgaa tcatcaactt
     2401 tagtatacgt atctgatgtc ataccttctc tgctttcact aagtgtaatc ttcattgtgt
     2461 tgtggttcgg tgtttctgat atagatataa tttgcatttt acttcctcct attgaagttc
     2521 atttcctaat tgttttattt ctttccctat tgaacactca ttgatacaaa aatgatgcga
     2581 cttcgttttc ccctctaatt tacgcagacg agttttgatt ggacattgat tgcaataagt
     2641 attcattaaa tcatctattt tcgcgagtgc attttgctct gaaaaagtta aaatacgcga
     2701 cacttccttt attacttcaa aatattgcaa ccttgtaaat aagtgttact gctttaaatt
     2761 tgacataaaa atattataac atttttgacc ctaagatttg aatgaaacct tttacaattc
     2821 tatacgtaaa atgtatttat attcaaatgc tattgcatcg caaacgattt ttcagtaaaa
     2881 tgagtaagtt atttattgag cggtttctaa acacccgcat gatcaaaatt taggaggaca
     2941 ttttaatatg tataatgaaa ttttaggact agttacgttt attgcaacgt tcgtgcttat
     3001 ggtacttatg tatcgctttt ttggtaaaca aggtttaatt gcatgggttg caattggcac
     3061 aatcattgcc aacatacaag taattaaaac tgtagaaatc tttggtattt cagcaacttt
     3121 aggtaatgtc atgtttgctt ctatttattt agcaacagat atattaaacg atatttatgg
     3181 gcgtagagtt gcaaaaagag cagtttggtt aggcttttca tcaacattaa ttatgattat
     3241 tgttatgcaa ttgtcattac attttattcc tgcaccagaa gatatggcac aaaaagcttt
     3301 acacgcaatc tttgatgttg tgccacgcat tgctttaggc tcaatcgtcg catatattat
     3361 tggtcaacat attgatgtat ttatcttttc actaattaaa aaagtattta gttctgataa
     3421 aacgtttttc atccgtgcat atggtagtac atttttaagc tcaataattg atacagcttt
     3481 atttgtagct atcgcattta tcggaagttt acctggtaca gttgtatttg aaatatttat
     3541 tacaacgtac gtactaaaat tagcttcaac agttttcaat gtaccatttg gatatattgc
     3601 taaatcattt tatcgtaaag gcaagattga taaattagat caaggttatt aacgcactta
     3661 ctacataata gaataagttt taagggagtg ggacagaaat gatattttcg caaaatttat
     3721 ttcgtcgtcc caccccggca aggttgacta gaattgaaaa aag
//
LOCUS       DAKPJH010000167         3742 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.170, whole genome shotgun sequence.
ACCESSION   DAKPJH010000167 DAKPJH010000000
VERSION     DAKPJH010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3742
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.170"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            41..1711
                     /gene="spa"
                     /locus_tag="OY092_002551"
     CDS             41..1711
                     /gene="spa"
                     /locus_tag="OY092_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal protein A"
                     /protein_id="HCX1077461.1"
                     /translation="MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQ
                     NAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNK
                     DQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNK
                     KQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNK
                     EQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNK
                     EQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNKKP
                     GKEDGNKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDGNKPGKEDNKKPSKEDGNKPGK
                     EDGNKPGKEDNKKPSKEDGNKPGKEDGNKPGKEDGNKPGKEDGNKPGKEDGNKPGKED
                     GNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNIIKPGQELVVDKK
                     QPANHADANKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL"
     gene            complement(2040..3632)
                     /locus_tag="OY092_002552"
     CDS             complement(2040..3632)
                     /locus_tag="OY092_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HCX1077462.1"
                     /translation="MTLLTVNPFDNVGLSALVAAVPIILFLLCLTVFKMKGIYAALTT
                     LVVTLIVALFVFELPARVSAGAITEGVVAGIFPIGYIVLMAVWLYKVSIKTGQFSIIQ
                     DSIASISEDQRIQLLLIGFCFNAFLEGAAGFGVPIAICAVLLIQLGFEPLKAAMLCLI
                     ANGAAGAFGAIGLPVSIIDTFNLSGGVTTLDVARYSALTLPILNFIIPFVLVFIVDGM
                     KGIKEILPVILTVSGTYTGLQLLLTIFHGPELADIIPSLATMVVLAFVCRKFKPKNIF
                     RLEASEHKIQKRTPKEIVFAWSPFVILTAFVLVWSAPFFKKLFQPGGALESLVLKMPI
                     PNTVSDLSPKGIALRLDLIGATGTAILLTVIITILITKLKWKSAGALLVEAIKELWLP
                     ILTISAILAIAKVMTYGGLTVAIGQGIAKAGAIFPLFSPVLGWIGVFMTGSVVNNNTL
                     FAPIQATVAQQISTSGSLLVAANTAGGVAAKLISPQSIAIATAAVKKVGEESALLKMT
                     LKYSIIFVAFICIWTFILTLIF"
BASE COUNT         1430 a          734 c          594 g          984 t
ORIGIN      
        1 tattatgatg actttacaaa tacatacagg gggtattaat ttgaaaaaga aaaacattta
       61 ttcaattcgt aaactaggtg taggtattgc atctgtaact ttaggtacat tacttatatc
      121 tggtggcgta acacctgctg caaatgctgc gcaacacgat gaagctcaac aaaatgcttt
      181 ttatcaagtc ttaaatatgc ctaacttaaa tgctgatcaa cgcaatggtt ttatccaaag
      241 ccttaaagat gatccaagcc aaagtgctaa cgttttaggt gaagctcaaa aacttaatga
      301 ctctcaagct ccaaaagctg atgcgcaaca aaataacttc aacaaagatc aacaaagcgc
      361 cttctatgaa attttgaaca tgcctaactt aaacgaagcg caacgcaatg gtttcattca
      421 aagtcttaaa gacgatccaa gccaaagcac taacgtttta ggtgaagcta aaaaattaaa
      481 cgaatctcaa gcaccgaaag ctgacaacaa tttcaacaaa aaacaacaaa atgctttcta
      541 tgaaatcttg aacatgccta acttgaacga agaacaacgc aatggtttca tccaaagctt
      601 aaaagatgac ccaagtcaaa gtgctaacct attgtcagaa gctaaaaagt taaatgaatc
      661 tcaagcaccg aaagcggata acaaattcaa caaagaacaa caaaatgctt tctatgaaat
      721 cttacattta cctaacttaa acgaagaaca acgcaatggt ttcatccaaa gcctaaaaga
      781 tgacccaagc caaagcgcta accttttagc agaagctaaa aagctaaatg atgcacaagc
      841 accaaaagct gacaacaaat tcaacaaaga acaacaaaat gctttctatg aaattttaca
      901 tttacctaac ttaactgaag aacaacgtaa cggcttcatc caaagcctta aagacgatcc
      961 ttcagtgagc aaagaaattt tagcagaagc taaaaagcta aacgatgctc aagcaccaaa
     1021 agaggaagac aacaaaaaac ctggtaaaga agacggcaac aaacctggca aagaagacgg
     1081 caacaaacct ggcaaagaag acaacaacaa acctggtaaa gaagacggca acaaacctgg
     1141 caaagaagat ggcaacaaac ctggcaaaga agacaacaaa aagcctagca aagaagacgg
     1201 caacaagcct ggtaaagaag atggcaacaa acctggcaaa gaagacaaca aaaagcctag
     1261 caaagaagac ggcaacaagc ctggtaaaga agatggcaac aaacctggta aagaagacgg
     1321 caacaagcct ggtaaagaag atggcaacaa acctggtaaa gaagacggca acaaacctgg
     1381 taaagaagat ggtaacaaac ctggcaaaga agacggcaac ggggtacatg tcgttaaacc
     1441 tggtgataca gtaaatgaca ttgcaaaagc aaacggcact actgctgaca aaattgctgc
     1501 agataacaaa ttagctgaca aaaacataat caaacctggt caagaacttg ttgttgataa
     1561 gaagcaacca gcaaaccatg cagatgctaa caaagctcaa gcattaccag aaactggtga
     1621 agaaaatcca ttcatcggta caactgtatt tggtggatta tcattagcgt taggtgcagc
     1681 gttattagct ggacgtcgtc gcgaactata aaaacaaaca atacacaacg atagatatca
     1741 ttttatccaa accaatttta acttatatac gttgattaac acattcttat ttgaaatgat
     1801 aagaatcatc taaatgcact agcaacatct tttgttgctc agtgcatttt ttattttact
     1861 tacttttcta aacaacttct gaaacgcctc aacactttct actctaatta catatacgac
     1921 atttttagac attaaaaaat cgaactagac aagatgctca atgcatttcg tactagttcg
     1981 attcatgaat aattagattt aaaatgtcat ttgaatccaa gtgacaacat tatttatatt
     2041 tagaatatta acgttagtat aaacgtccaa atacaaataa aggcaacaaa tataatactg
     2101 tattttagcg tcatttttaa taatgctgat tcttcaccaa cttttttaac agctgcagtc
     2161 gcaatggcaa ttgattgtgg tgaaataagt ttcgctgcta caccacctgc agtgttagct
     2221 gccacaagta atgaaccgct tgttgaaatt tgttgtgcca ctgtcgcttg aataggtgcg
     2281 aataaagtat tgttatttac aactgaacca gtcataaaca caccaatcca acctaatact
     2341 ggagagaata atgggaaaat tgctccagct ttagcaatac cttgtccaat tgctacagtc
     2401 aaaccaccgt atgtcataac tttagcaata gctaggatag ctgaaattgt aaggatcggt
     2461 aaccataatt ctttaattgc ttcgaccaat aaagcacctg cacttttcca ttttaacttc
     2521 gtaattaaaa ttgtaataat tactgttaat aaaatcgctg tcccagttgc accaattaaa
     2581 tcgagacgca acgcaattcc tttaggcgat aaatcactca cagtatttgg aattggcatt
     2641 tttaatacta aactttcaag cgcacctcca ggttggaata attttttaaa gaatggtgca
     2701 ctccatacta atacaaaggc agttaaaatt acgaacggac tccaagcaaa gacaatttct
     2761 ttaggcgttc gtttttgaat tttatgttca gacgcttcca atctgaaaat gtttttcggt
     2821 ttaaatttac gacaaacaaa tgctaacacc accattgttg ctagtgatgg aataatgtct
     2881 gctagttctg gaccatggaa tattgttaat aataattgta atccagtata tgtaccactc
     2941 actgttaaaa tgacaggtaa aatttcttta atacctttca taccatctac aatgaatact
     3001 aaaacaaatg gaataataaa gtttaaaatt ggaagtgtta atgctgagta tctcgcaaca
     3061 tctaatgttg taacgcctcc acttaagtta aacgtatcaa taatactaac tggtaaacca
     3121 attgcaccaa aggcacccgc cgcaccatta gcaattaaac ataacatcgc tgcttttaat
     3181 ggttcaaatc caagttgaat taataatact gcacaaatcg caattggcac accaaatcct
     3241 gctgcacctt ctaaaaatgc gttgaaacaa aatccaatta ataatagttg gattctttgg
     3301 tcctctgaaa tactagcaat actatcttga ataatagaaa attgtcctgt tttaatagaa
     3361 actttatata accaaactgc cattaaaacg atatatccta ttggaaaaat accggcaaca
     3421 acgccttctg taatcgcacc tgctgataca cgcgctggta attcaaatac aaataaagcc
     3481 acaatcaatg taacaaccaa agttgtcaat gctgcataaa tgcctttcat tttaaaaacg
     3541 gttaagcata ataaaaataa aataataggt actgctgcaa ctaaggctga taatccaaca
     3601 ttatcgaatg gatttacagt aagtagtgtc ataatgactc cctctcttta tataaaatat
     3661 ttatcattct gattaatcta caacctattt caacttatat tttgcgatga tcacatattt
     3721 aaaatgtaac actcctatat gt
//
LOCUS       DAKPJH010000168         3615 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.171, whole genome shotgun sequence.
ACCESSION   DAKPJH010000168 DAKPJH010000000
VERSION     DAKPJH010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.171"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..134)
                     /locus_tag="OY092_002553"
     CDS             complement(<1..134)
                     /locus_tag="OY092_002553"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HCX1077463.1"
                     /translation="MENKNNRYSIRKFSVGVGSILIASFIMIFQNEAHASEKAIETPK
                     "
     gene            530..1348
                     /locus_tag="OY092_002554"
     CDS             530..1348
                     /locus_tag="OY092_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001836610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HCX1077464.1"
                     /translation="MDYTRLNTDELTFIESYYHQNLSVKEISSRLKRSIQTIYNVINA
                     FKSGMSALEYYQEYKQRKSNCGRHRIVLPEEQSDYIREKIADGWTPNTIIGRGERTIN
                     CSVKTLYRMFKENIFAVHDLPMKGKRKPNGHSEKRGRQTFKRNISERIEEFPLFNKEF
                     GHLEGNTIVGRRHGSAIITLVERVSKMIITLRPLGRKATDIENALHSMFSSLPSHIFK
                     SITFDCGKEFSNWKTICTCHDISIFFADPGKPSQRGLNEHSNGILRRSGLDKLY"
     gene            1398..1505
                     /locus_tag="OY092_002555"
                     /pseudo
     CDS             1398..1505
                     /locus_tag="OY092_002555"
                     /inference="COORDINATES: protein motif:HMM:NF024729.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(1911..2078)
                     /locus_tag="OY092_002556"
     CDS             complement(1911..2078)
                     /locus_tag="OY092_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077465.1"
                     /translation="MKIGDLAKPDISRDLVFFDVGAKILLVFHLFNEKDWVILANKEL
                     KIRNIDSGLLG"
     gene            complement(2804..3235)
                     /locus_tag="OY092_002557"
     CDS             complement(2804..3235)
                     /locus_tag="OY092_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077466.1"
                     /translation="MENKSNGLVGYAIATFCIIFGFFWFMFGGGGWIWIGFPFLIFGF
                     LGLLVELSEEGYKRYCYFTGGVGMIFLSLYFVDYEFFVLKFIFAILICGAMTCFVVGA
                     IYAFRISNGKASFADTLFKVFDIAGAVYSAYLLFKEIVNFF"
BASE COUNT         1372 a          589 c          448 g         1206 t
ORIGIN      
        1 tctttaggtg tttctattgc tttttcagaa gcatgagctt cattttgaaa aatcattata
       61 aaactagcta ttaaaataga tcctacacca actgaaaatt tacgaattga atacctatta
      121 tttttatttt ccataaaaat ctcctttttt attttattat ttttatagta tcataaaaat
      181 cgccgaaaat gtgggtgtca ataattagat aaatttaaat attttttgaa ttagaacact
      241 tgtgatacta aaacataaaa tttttactag tcaattaatt ttaagtataa gcgaaaaaac
      301 aagaagtatt acaagacaat acgctgatta tcaatttcca attttaaaag aggaaattcc
      361 acttaaaaag ttagactttc aatcaagaaa tattttaatt aaaaactacg gcgtatataa
      421 agaaaacaaa ttcgccaatt gtaaaattaa gttagacaaa taaataagcc ttctgtacta
      481 aactcaatat gtatttccta ccaaagaaaa cataaggagt tagtacagaa tggactatac
      541 acgtcttaac acggatgaac ttacgttcat agaatcatat tatcaccaga atctttcagt
      601 taaagagatt tcgagtagat tgaaacgttc tatacagaca atttataacg taatcaatgc
      661 ttttaagtcg gggatgtctg cccttgaata ttatcaagaa tacaaacaaa gaaagtctaa
      721 ttgtgggagg catagaatag ttcttccaga agaacagtct gattatatcc gagagaaaat
      781 agctgatgga tggacaccta atactattat tggcagaggt gaacgcacga tcaactgttc
      841 tgttaaaaca ctttacagaa tgtttaaaga gaacattttt gctgtacatg atttacctat
      901 gaaaggcaaa agaaagccaa atggtcattc tgaaaaaaga ggcagacaga cttttaaaag
      961 aaatatttct gaaagaatag aagaatttcc tttattcaat aaggagtttg ggcatcttga
     1021 aggaaatact attgttggtc gtcgtcatgg tagtgcaatc attactttgg tagaaagagt
     1081 atccaagatg attatcacct tacgcccctt aggtcgtaag gcaactgata tagaaaacgc
     1141 tctacactca atgttttcat ctttaccttc tcatatattt aaatcaatta cttttgattg
     1201 tggtaaggag ttctcaaact ggaaaacaat atgcacctgt catgatatat ctatattttt
     1261 tgctgatcca ggcaagccat cacagcgagg tttaaatgaa cattctaacg gaatacttag
     1321 acgcagtgga ttagataaac tctattaaaa tagatgttgt tcaactaaga aggcagttga
     1381 ttttattatg actagaaaca gaactatttg attatgtaaa ttggtacaac aattttagac
     1441 cacattcttc attacagtat ttgacgccag tgacatttaa aaatttacac atgaaaactg
     1501 tctaaaaaaa tgttgacata ccattctatg tcctttaaac tcaattttta attttcatct
     1561 tttatacctt tatttatact ctcaatcaaa tttccttttg gcgttaaaat ggatatatct
     1621 ttgtaattta ttccacgcat gaacgttttg aatttcaata cattttaaat ataaaatagc
     1681 tcacactttt tcaacttttg ttctcatatt taataatcta ctgattcaag taacgctaaa
     1741 attttgcttt atttactcgc aatttctttt aatttttttg tattttgtgc ttgctgatgt
     1801 gattgttctt catataattt ttgacaactt tcaagtgtat atagcagttc taatgtttct
     1861 aatattaatt catttctcga tatgtttttc tctttagcta atctacttaa tcaacctagc
     1921 aatccactat ctatatttct aattttcagt tctttgttag ccaaaataac ccaatctttc
     1981 tcattaaaaa ggtggaacac taacaaaatt ttggccccca catcaaaaaa tactaaatct
     2041 cttgaaatat ctggcttcgc caaatcacca attttcaaat gggtacaaat tccccttatg
     2101 ctcttacaag atttttacta attttcacgt ttttactaaa acgctcataa tatccatata
     2161 tttttttcat aacatgtaag aaaaaattat caaatcaaat gttaaaagca ctaattttta
     2221 tactatattt aagatgtgtc tataacaaaa gaagtgttca aaataaaact aagttataaa
     2281 ctaaaaatgg aacgtcttaa cgaagaaata tctcaaaaga aattggcaaa atcacttaat
     2341 aaatttttaa aaacgactta ttataccaaa agaaaaatag atcgcattga aagtaatacg
     2401 acctatttaa aatttgatgt tgtcaatgaa gtgtagtgct tctttaatct aactatgcaa
     2461 gagttactac acaaaaattg gtcagcatat aataaaagtt tcacagacta cttgcaaaat
     2521 aaaaccataa aatattgtta cttgcctaat gaaaatagaa catgtattta tcaattttcc
     2581 caacttatat ctcattttaa tttggttaat aaacaagatt ggattgcatt ttctaaatat
     2641 gattttatac aaatcattta ttacgatcac tttaaaatca aacatattta tgtttatctt
     2701 cgtagacgca ttcccttttt atagcgttat actatttata atagcttgtt atttctatat
     2761 agtatcaaga caagaagaaa ctcgttttca ctcgtttcaa aacctaaaag aaattaacaa
     2821 tttctttgaa taataaataa gcagaatata cagcaccagc aatatcaaaa accttaaaaa
     2881 gcgtatcagc aaaagaagct ttaccattag aaattctgaa agcataaata gcaccaacta
     2941 caaagcaagt catagcacca caaattaaaa tggcaaatat aaatttcaga acaaaaaatt
     3001 cataatctac aaaatacaaa gataagaaaa tcattccaac tccaccagta aaatagcaat
     3061 acctcttata gccttcttca ctcaactcaa caagtagtcc taagaatcca aatattaaaa
     3121 acggaaaacc tatccaaatc caacctccac caccaaacat aaaccaaaaa aagccaaaaa
     3181 taatacaaaa agttgctata gcatatccaa ctaaaccatt acttttattt tccaatgaat
     3241 catccctcat tcttttattt ttaattatta tacaccttaa aaacctttat ttgacggtaa
     3301 cttaaagcat ttttatctct tagacagaaa aaaacaggat ttcgaaagaa cataatatta
     3361 tgggcaaatt taaagctttg atcactcagt ggttaaagct cttttttata aaagaatagt
     3421 ttgctctgct gattgctata ttaataaaca cagagtaaaa acaaggagga atacagatga
     3481 ctgtaacagt tatgctaagt aatatatgta tatgcatcat tgcccaatat ctctacgaac
     3541 aaataaaaaa ataataagta aaaacatcta attgctttat tccaattgct ttattgacgt
     3601 tgagcctcgg aaccc
//
LOCUS       DAKPJH010000169         3596 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.172, whole genome shotgun sequence.
ACCESSION   DAKPJH010000169 DAKPJH010000000
VERSION     DAKPJH010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.172"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            126..1544
                     /locus_tag="OY092_002558"
     CDS             126..1544
                     /locus_tag="OY092_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HCX1077467.1"
                     /translation="MENTVKYRKFILPIVVGLLIWALTPFKPDAVDPTAWYMFAIFVA
                     TIIACITQPMPIGAVSIIGFTIMVLVGIVDMKTAVAGFGNNSIWLIAMAFFISRGFVK
                     TGLGRRIALHFVKLFGKKTLGLAYSIVGVDLILAPATPSNTARAGGIMFPIIKSLSES
                     FGSKPKDGSARKMGAFLVFTEFQGNLITAAMFLTAMAGNPLAQNLASSTSNVHITWMN
                     WFLAALVPGLVSLIVVPFIIYKIYPPTVKETPNAKSWAENELATMGKIDLAEKFMIGI
                     FVIALTLWIVGSFIHIDATLTAFIALALLLLTGVLTWQDILNETGAWNTLVWFSVLVL
                     MADQLNKLGFIPWLSKSIATSLGGLSWPIVLVILILFYFYSHYLFASSTAHISAMYAA
                     LLGVAIAAGAPPLFSALMLGFFGNLLASTTHYSSGPAPILFSSGYVTQKRWWTMNLIL
                     GFVYFIIWIGLGSLWMKVIGIF"
     gene            complement(1957..2865)
                     /gene="rarD"
                     /locus_tag="OY092_002559"
     CDS             complement(1957..2865)
                     /gene="rarD"
                     /locus_tag="OY092_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HCX1077468.1"
                     /translation="MNTEYKKGVFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIF
                     SVIFMIFILAVGQKQRNAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGH
                     VLQTSLGYYINPLVSILLALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSII
                     LALSFGTYGLLKKVVHIDAISSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWL
                     LFSGAITAIPLILFSAGAKRIPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFI
                     FIWTGIVLYSLSQYIKLKKHPVAKTL"
     gene            3086..>3596
                     /locus_tag="OY092_002560"
     CDS             3086..>3596
                     /locus_tag="OY092_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCX1077469.1"
                     /translation="MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAI
                     SILEQALFQHQLHFKTEVHSSLPFKLTGDVSCNHAPKRQQMIDFIVATAALDIELLRS
                     LVTTEFIWSVPGRFDIYGPQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKT
                     GKEIHFAHFF"
BASE COUNT         1151 a          643 c          589 g         1213 t
ORIGIN      
        1 aaaataatta tattaatgat ttcgttaatt taattttata tttaattatt actgtacatc
       61 ttttgtagtt agctttattc ttaaattgaa atatgtataa aacatagaaa gaaggacgtt
      121 ttaacatgga aaacacggtt aaatatcgta agtttatact ccctatcgtt gtaggtctcc
      181 ttatttgggc acttacacct tttaaaccgg atgctgtgga tccaacagca tggtatatgt
      241 tcgcaatatt cgtcgcgaca atcattgctt gtattacaca accgatgcca attggggccg
      301 tctctataat tggatttaca atcatggtac tcgttggaat tgttgacatg aaaacggctg
      361 tcgctggttt tggtaataat agcatttggt taattgctat ggcatttttc atttcgagag
      421 gatttgtgaa aacaggtctt ggtagacgga tcgcacttca tttcgtcaaa ttatttggta
      481 aaaaaacatt aggattagca tattctatcg tcggtgtaga tttaattcta gcgcctgcta
      541 caccaagtaa taccgcgcgt gctggtggaa tcatgttccc aattatcaaa tcactttctg
      601 aatcatttgg ttcgaaaccg aaagacggat cagcacgcaa aatgggtgca tttcttgttt
      661 tcacagaatt ccaaggtaat ttaattactg cggctatgtt tttaactgca atggccggta
      721 acccccttgc acaaaattta gcatctagca catctaatgt tcacattaca tggatgaatt
      781 ggttcctagc tgctttagtt cctggacttg tttccttaat tgttgtacct tttattattt
      841 ataaaattta tccaccaact gttaaagaaa caccaaatgc taagagttgg gctgaaaatg
      901 aattagcgac tatgggtaaa atcgatttag ctgaaaaatt tatgattggt atttttgtca
      961 ttgctctaac attatggatt gttggaagtt tcattcatat tgatgcaact ttaacggcct
     1021 ttattgcgct agcattgtta ttattgacag gcgtcttaac atggcaagac attttaaacg
     1081 aaacaggtgc ttggaacaca ttagtatggt tctcagtatt agtgttaatg gccgaccaat
     1141 taaacaagct tggatttatt ccttggttaa gtaaatccat tgctacaagt cttggtggct
     1201 taagctggcc tatagtactg gtcattttaa tattgttcta cttctattca cattacttat
     1261 ttgcaagttc tacagcacat atcagtgcga tgtatgcagc attactaggc gttgccatcg
     1321 cagccggtgc accaccatta ttcagtgcat taatgttagg tttcttcggt aacctattag
     1381 cttcaacaac acactatagt agtggtccag cgccgattct attctcttca ggttacgtga
     1441 ctcaaaaacg ttggtggaca atgaacttaa tattaggttt cgtctacttt attatctgga
     1501 ttggtttagg atcactttgg atgaaagtaa ttggtatatt ttaaaatatt taaattagcg
     1561 ctcgaatctc attgatttgg gcgcttttta atttgtattt aaaatcaatc tttgctaaat
     1621 caagactccc tttttaaaat acgtttatcc tttaaatcat tgcctacttc actgaaaatt
     1681 tgtataaaga tttaagtcat tacgtaacat cacataaaat acatttctat actaatccgt
     1741 ttcattgatc aacattacgt atgccctcat aaatcatgaa ataaaaaaca ccttcgttta
     1801 aattcatttt aagtgcgaat tcaacgaaag tgctttattt catatttaat gtttcaaatt
     1861 tatacggcta tcactgttac tgcacacata cctcagtctc accttatcat gacacaaagg
     1921 aaattgaaaa cacgtataat tatctctcct cgtattttat agggtttttg cgaccggatg
     1981 tttcttcaat ttaatgtatt gagaaagact atataacaca atacctgtcc aaataaatat
     2041 aaacgtaatt aattgatcta tactaaaagg ctctttgaaa acaaatatgc cgagtacaaa
     2101 cattattgtt ggtccaacgt attgaataaa tcctattaac gaaagtggaa tacgttttgc
     2161 cccggctgag aataggatta gtggtattgc cgtaatagca ccagaaaata acaaccaaaa
     2221 tgatgacatg ttcaatccaa atgacatctg atgttgctgc cataaataaa taacgtatat
     2281 gagtccagca ggtgcggtaa caatacattc aatcgtaata ctgctgatgg catcaatatg
     2341 tactactttt ttcaataatc catatgtacc aaaggataac gctaatataa tagagacgat
     2401 tgggaattct ccaattttca gtgtcatata taatacaccg atgaatgcga ataaaatggc
     2461 tagccattca aatttattga atctttcttt taaaaagata agtgcgagca aaatgctaac
     2521 aagtggattt atataataac ctaaacttgt ttgtaggacg tgtccgttcg ttacagccca
     2581 aataaatgta ccccaattta atgtaatgac atagcctgct acgacaattg ctagtaattg
     2641 aatgggcttg gctaacaatt gattcatatc tcgttgaaat gcattgcgtt gtttttgtcc
     2701 aaccgcgagt atgaaaatca tgaatattac tgaaaatata atacgaaagg ctaaaatttc
     2761 aaatgcgcct attgcatcaa cgaactgcca atatataggt agtattcccc acagaatgta
     2821 tgcactgagt gctaaaaata cacctttttt atattctgta ttcacttaca tacctcctta
     2881 ctctcccaat ttttaacatg ttacgctcac ttagttaagc taatataacg attttactaa
     2941 taatatttcg ataaagatat cattttgttt atatttccca catttattca ccaaccacta
     3001 aacaatatta attttataaa taattctgta caaatcaggg tatattgcca gaaagactac
     3061 catacaacat aaaggatgga tacaaatgac tttacctaaa attggaaagc ctgcaacacg
     3121 cgcgctaaat tcacaaggta tatacacatt agaagcagta tcacaatata cgaagtcatc
     3181 tctaatggag atgcatggcg ttggtcctaa agctatatca atattggaac aagctttatt
     3241 tcagcaccaa ctacatttta aaacggaagt tcattcatca ttacctttta agttaacagg
     3301 agatgtgtca tgcaatcatg cgcctaaacg tcaacaaatg atagatttta tagttgctac
     3361 agcagcatta gatattgaat tattacgttc actggttaca acagaattta tttggtctgt
     3421 ccctggccgc tttgacatat acggacctca aatattaatt caagaactat ctaatcatta
     3481 caatcaggtt gctagtctca atatccattc cagcatcaca catgggtgct taggttccat
     3541 gcatggtatt gaaatattaa aaactggtaa agagattcat tttgctcatt tttttg
//
LOCUS       DAKPJH010000170         3395 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.173, whole genome shotgun sequence.
ACCESSION   DAKPJH010000170 DAKPJH010000000
VERSION     DAKPJH010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.173"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            93..1079
                     /locus_tag="OY092_002561"
     CDS             93..1079
                     /locus_tag="OY092_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1077470.1"
                     /translation="MFIIKSMMYRLIQMIVVLFVISTLTFILMKLSPGNPVDKILHLD
                     VAQVSTEQINATKDKLGLNDSLLVQWWHWMNHLLHFNLGKSFESKEPVTQILFNYAPI
                     TLLISFSTLVVSLCISIPLGIIAAKRFHKWTDKVIRVISTLSISLPAFFIGIILLFIV
                     TNLMNIDSVILSQFILPVLTLSLGMCAYIIRLVRSNLLMLLQSNIVQASRLRGMNERY
                     ILIHDLLKPTIFPIIPLLGISLGSLIGGTVVIENLFDIPGIGYLLMDSIKSRDYPVIQ
                     GCVLFIGFFVVIINTIADLLTLLLDPKQRLQLGNPKNKTNTPLISEGSDRHA"
     gene            1072..1902
                     /locus_tag="OY092_002562"
     CDS             1072..1902
                     /locus_tag="OY092_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1077471.1"
                     /translation="MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENTTKVNLSQTFE
                     PISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIE
                     RLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISIAVIKWMNYTRLTRSIVNSEMN
                     KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPP
                     TPEWGAMLQQGRDFISSHPIMLIAPASVIAITILIFNLTGDTLRDRLLKQRGEYDESH
                     "
     gene            1889..2662
                     /locus_tag="OY092_002563"
     CDS             1889..2662
                     /locus_tag="OY092_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1077472.1"
                     /translation="MSLIDIQNLTIKNTSEKSLIKGIDLKIFSQRINALIGESGAGKS
                     LIAKALLEYLPFDLTCTYDSYQFDGENVSKLSQYYGHTIGYISQNYAESFNDHTKLGK
                     QLTAIYRKHYKNSKEEALSKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLM
                     LEPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYINVL
                     KEGQIIERGNINHFKYEHLHPYTERLIKYRTQLKRDYYD"
     gene            2655..3356
                     /locus_tag="OY092_002564"
     CDS             2655..3356
                     /locus_tag="OY092_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCX1077473.1"
                     /translation="MIELKHVTFGYNKKQMVLQDINITIPDGENVGILGESGCGKSTL
                     ASLVLGLFKPVKGEIYLSDNAVLPIFQHPLTSFNPDWTIETSLKEALYYYRGLTDNTA
                     QDQLLIQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLVQPRVLICDEITSNLDV
                     IAEQNVINILKAQTITNLNHFIVISHDLSVLQRLVNRIIVLKDGMIVDDFAIEELFNV
                     DRHPYTKELVQAFSY"
BASE COUNT         1133 a          484 c          597 g         1181 t
ORIGIN      
        1 aacgttggtt cttaatatgt aagttgcata tacacgcgcc attctcatgt aacaagaaag
       61 tgttggtaac ttacacaagg agggggacta ttatgttcat aataaagtct atgatgtata
      121 gactgataca aatgatagtt gttttatttg ttatttctac acttacattc attttaatga
      181 aattatcacc aggaaatcct gttgataaaa tattacatct tgatgtagca caagtgtcga
      241 cggaacaaat aaatgcaacc aaagataaat tgggattaaa tgattcttta ttggtacagt
      301 ggtggcattg gatgaatcat ttattacatt ttaatttagg aaaaagtttt gaatcaaaag
      361 aaccggtaac acagatatta ttcaactatg cacccataac attactcata tcattttcaa
      421 cattagtagt gtcgttatgc atatctatac cgctcggcat tatagcagcc aaacgatttc
      481 ataagtggac ggataaagtg attagagtga tctcaacact atcaattagt ttaccagcgt
      541 tctttatcgg tattatttta ttatttattg tcacaaattt aatgaatata gatagcgtta
      601 tactaagtca gtttatatta cctgtactca cactatcttt aggtatgtgt gcatacatca
      661 ttcgtttagt gcgctctaat ttattgatgt tattgcaaag taatatcgta caagcatcaa
      721 gattacgcgg tatgaatgaa cgttatattt taattcatga tttactaaaa ccaacaattt
      781 ttccgattat cccattatta gggatttcac ttggtagtct aataggtggt actgtagtga
      841 ttgaaaattt atttgatata cctggtattg gttatctatt aatggatagt attaaatctc
      901 gagattatcc tgttattcaa ggatgcgtgt tatttattgg cttcttcgtt gttattatta
      961 atacgattgc tgatttatta acgttattac ttgatccgaa gcagcgtcta caattaggaa
     1021 atccaaaaaa caaaaccaat acaccattga tatcagaagg tagtgaccgt catgcataaa
     1081 atattttcaa agaataacct gatatttttt gtattcgttg catttatttt tgtggtaatt
     1141 gtactgcaat tctttgtaag tagtgaaaat acaaccaaag tcaatttatc acaaactttt
     1201 gaacctatta gttggttgca tttattagga actgatgatt atgggagaga tttatttacc
     1261 cgaattatta tcggtgcacg ttcaacattg tttgttactg ttttaacatt aatagctatc
     1321 gttgtcatag gtgttacact aggtctattt gccggatata aaaaggggtg gattgaacga
     1381 ttagtgttaa ggtttattga tgttggtcta agtattccag aatttatcat catgattgct
     1441 ttagcaagct ttttccaacc atcgttatgg aatttagtta tttcaattgc agtaataaaa
     1501 tggatgaatt acacaaggtt gactagaagt atagttaata gcgaaatgaa taagccttat
     1561 ataaaaatgg cacaattatt tcatgtacct acaagaacaa tattaatacg tcatttaaca
     1621 cctaaaatta taccggctat tatcgttttg atggtcgttg atttcggtaa aatcattcta
     1681 tatataagtt cactatcatt tattgggtta ggtgcacaac cgccaacacc agagtggggc
     1741 gctatgttgc aacaaggtcg tgattttatt tcgtctcatc caattatgtt gattgcacct
     1801 gcttcagtca ttgctataac tattttaatt tttaatttaa ccggtgatac gctaagagat
     1861 agattgctga aacaacgagg tgaatatgat gagtctcatt gatatacaaa atttaacaat
     1921 aaagaatact agtgagaaat cacttattaa agggattgat ttgaaaattt ttagtcaacg
     1981 gattaatgcc ttgattggag agagcggcgc tggaaaaagt ttgattgcta aagccttact
     2041 tgaatattta ccattcgatt taacctgcac gtatgattcg taccaatttg atggggaaaa
     2101 tgttagtaaa ttgagtcaat attatggtca tacaattggc tatatttctc aaaattatgc
     2161 agaaagtttt aacgaccata ctaaattagg taaacagtta actgcgattt atcgtaagca
     2221 ttataaaaat agtaaagaag aggctttgtc caaaattgat aaggctttgt cgtgggttaa
     2281 tttacaaagc aaagatatat taaataaata tagtttccaa ctttctgggg gccaacttga
     2341 acgcgtatac atagcaagcg ttctcatgtt ggagcctaaa ttaatcattg cagacgaacc
     2401 agttgcatca ttggatgctt tgaacggtaa tcaagtgatg gatttattac agcatattgt
     2461 attagaacat ggtcaaacat tatttattat cacacataac ttaagtcatg tattgaaata
     2521 ttgtcagtac attaatgttt taaaagaagg tcaaatcatt gaacgaggta atattaatca
     2581 tttcaagtat gagcatttgc atccgtatac tgaacgtcta attaaatata gaacacaatt
     2641 aaagagggat tactatgatt gagttaaaac atgtgacttt tggttataat aaaaagcaga
     2701 tggtgctaca agatatcaat attactatac ctgatggaga aaatgttggt attttaggcg
     2761 aaagtggctg tggtaaaagt acgctcgctt cattggttct tggcttgttt aaacctgtta
     2821 aaggagaaat ttacttaagt gataatgctg tgttaccgat tttccaacac cctttaacta
     2881 gctttaaccc tgattggacg attgagacct cattaaaaga agcgttatat tattacagag
     2941 gcctaactga taatactgct caggatcaat tattaataca acatttatct acttttgagt
     3001 tgaacgcgca attattgact aaattaccaa gcgaagtgag tggtggacaa ttacaaagat
     3061 ttaatgtcat gcgttcgtta ttagtacaac ctcgcgtttt aatatgtgat gagataactt
     3121 caaatttaga tgttatagct gaacaaaatg taataaatat attaaaagcg caaacgatta
     3181 cgaacttaaa tcattttatc gttatttctc atgatttatc cgtgttacaa cgcttagtta
     3241 atagaattat cgttcttaag gatggcatga tagtcgatga ttttgcaata gaggaattat
     3301 ttaatgttga tagacaccct tatacaaaag aattagtgca agcattttca tattagttat
     3361 ttaagaatgc gataattcta gacttgttat aaaat
//
LOCUS       DAKPJH010000171         3377 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.174, whole genome shotgun sequence.
ACCESSION   DAKPJH010000171 DAKPJH010000000
VERSION     DAKPJH010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.174"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            22..738
                     /locus_tag="OY092_002565"
     CDS             22..738
                     /locus_tag="OY092_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCX1077474.1"
                     /translation="MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESN
                     QALRLVLERAKTYSVPNHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNN
                     VNRTASDVRAAFGKNGGNMGVSGSVAYMFDHVATFGIEGKSVDDILETLMEQDVDVND
                     VIDDNGLTIVYAEPDQFAVVQDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKL
                     IDALEDLEDVQNVFHNVDLK"
     gene            738..1211
                     /locus_tag="OY092_002566"
     CDS             738..1211
                     /locus_tag="OY092_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HCX1077475.1"
                     /translation="MKTAEQWINELQLESHPEGGFYRETIREVLKDGHRAPFSSIYFL
                     LTDDNISHFHRIDADEVWYYHAGDSLTIHMINPDGEYMTATLGTDIQNGDVLQYVVPK
                     GTIFASSIENSNTFSLVGCMCQPAFEFKQFELFKQSELFDQYPHLKSVIEKYALK"
     gene            1304..1420
                     /locus_tag="OY092_002567"
     CDS             1304..1420
                     /locus_tag="OY092_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077476.1"
                     /translation="MLQMFLMKIALNDFENDKSVLFIFLKNHFYEEMCVLSN"
     gene            1565..2212
                     /locus_tag="OY092_002568"
     CDS             1565..2212
                     /locus_tag="OY092_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HCX1077477.1"
                     /translation="MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDP
                     LEVTVVGQNIIVADDNYKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGN
                     ARTVDLCLDVLALPSGEYELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDF
                     KGFQKKIMYCFNKINAKAQKNHQKPQNKTNFEKSKQIKPKQYNQTKNHQQQKKTK"
     gene            2326..3192
                     /locus_tag="OY092_002569"
     CDS             2326..3192
                     /locus_tag="OY092_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCX1077478.1"
                     /translation="MKIEDYRLLITLDETKTLRKAAEILYISQPAVTQRLKAIENAFG
                     VDIFIRTKKQLITTTEGTMIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIG
                     QTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFND
                     DHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKE
                     MLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFV
                     NLMASFVEQPKA"
BASE COUNT         1277 a          440 c          639 g         1021 t
ORIGIN      
        1 gttcgaaagc gagatgacat tatgggacgt aaatggaata acattaaaga aaaaaaggcc
       61 caaaaggata aaaatacaag tagaatatat gcgaaatttg gtaaggagat ttatgttgca
      121 gcaaaatctg gtgaaccaaa cccagaatct aaccaagctt taagattggt acttgaacgc
      181 gctaagacat attcagtacc gaatcatatt attgaaaaag caatagataa agctaagggt
      241 gctggagacg aaaactttga tcacctaaga tatgaaggat ttggcccaag cggatcaatg
      301 cttattgttg atgcgttaac aaacaatgta aatcgtactg catctgatgt gcgtgctgct
      361 tttggtaaaa acggcggtaa tatgggtgta tctggatcag ttgcttatat gtttgaccat
      421 gtggcaacgt ttggtattga aggtaaatct gttgacgata tacttgaaac attaatggaa
      481 caagatgtag atgtaaatga tgtgattgac gacaatggat tgacaatagt ctatgctgaa
      541 ccagatcaat ttgcggttgt tcaagatgcg cttcgtgcag ctggtgtaga agaatttaaa
      601 gtagcagaat ttgaaatgtt acctcaaaca gatattgagc tttctgaagc ggaccaagta
      661 acatttgaaa aattaatcga tgcattagaa gatttagaag atgtacaaaa cgtattccat
      721 aatgtggatt tgaaataatg aaaacagcag aacaatggat taatgaatta caactcgaat
      781 cgcatcctga aggtggtttt tatagagaga caatccgaga agtattaaaa gatggacaca
      841 gagcgccgtt tagcagtatt tattttttac ttacagatga caatatttcg cattttcatc
      901 gaattgatgc tgatgaagta tggtactatc atgccggtga ttctctaaca attcatatga
      961 taaatccgga tggagaatat atgactgcaa cattgggtac tgatatccaa aatggagatg
     1021 tattgcaata tgtagtgcct aaaggaacaa tttttgcttc ttcaattgaa aattcaaata
     1081 cttttagttt agtaggttgt atgtgtcaac cggcatttga gtttaagcaa tttgaattgt
     1141 ttaagcaatc tgaattattt gatcaatatc cgcatcttaa atcagtaatc gaaaaatatg
     1201 ctttaaaata aaaaagaatc aatgaagtgg tttgaaggtt gttaataaac ctttgagtca
     1261 cttcattttt atatgtattc ttgattgaat cagaatagat ttgatgcttc agatgttttt
     1321 aatgaaaata gcattaaatg attttgaaaa cgataagagt gtgttattta tatttttgaa
     1381 aaatcacttt tatgaagaaa tgtgtgtact atctaattaa tattgtctat tttaagtaaa
     1441 ttgaagcgag ttgtagtaaa ataataataa atattttcat atgattaaca aaaactataa
     1501 aactgtatca tgacatgaca tcatttatgt agttttatat aataatgaca aggagttggt
     1561 gactgtgaaa gtaaagtata tagataaacg tcactggcgt cgcctaattg atagggaata
     1621 cacagaggta aaagttaata ataataggtt taagggtatt ataggcttag tcacgatgaa
     1681 aaaggttcgt gatcctttag aggtgacggt agttggacaa aatatcattg tcgcagatga
     1741 caattataaa tggttgcaaa tactacctga aaagaaacgt tatagtataa ctgtaatgtt
     1801 tgataataaa ggcaatccat tagaatatta ttttgatata aatatcaaaa atataacgca
     1861 aaaaggcaat gcgcgtacag tagatttatg tttagatgtt ttagcattac caagtggtga
     1921 atatgagttg gtagatgaag atgatttaat gtttgcatta gaaagtgagc aaattacaaa
     1981 aaagcaattt catgaagcat atatgattgc acatcaaatt atggcagagt tagaaaatga
     2041 ttttaaagga ttccaaaaga aaatcatgta ctgctttaat aaaattaatg caaaggctca
     2101 aaaaaatcat caaaagccac aaaataaaac taattttgaa aaaagcaaac aaataaaacc
     2161 taagcaatat aatcaaacta aaaatcacca acaacaaaag aaaactaagt aattcaagct
     2221 gcagccatac caataaaatt ggtgaaaatt attcgttagt aatgaactct tgaatgctcg
     2281 tagtcatgaa agttcaataa ttgaataatt tatggggggg aaattatgaa gattgaagac
     2341 tatcgtttac taataacatt agacgaaacg aaaacgttac gtaaagcggc tgaaatttta
     2401 tatatatctc aacctgctgt tacacaaaga ctaaaagcta ttgaaaatgc ttttggagta
     2461 gatattttta tcagaacaaa aaaacaattg attacaacaa ctgaaggaac aatgattatt
     2521 gagcatgccc gtgacatgtt gaaaagagag cgattatttt ttgacaaaat gcaggcacat
     2581 attggtgaag tgaatggaac aatatcaatc gggtgttctt ctttgattgg acaaacctta
     2641 cttcctgaag ttttgagcct atataatgcc caatttccta atgttgaaat acaagtgcaa
     2701 gttggttcaa ctgaacaaat taaagcaaat catagagatt atcatgttat gataactcgt
     2761 ggaaataagg taatgaattt agctaacaca cacttattta atgatgatca ttattttatt
     2821 tttccaaaaa atagacgaga tgatgttaca aagttaccat ttatagagtt tcaagctgac
     2881 ccgatttata taaatcaaat aaaacaatgg tataacgata atttagaaca agattaccat
     2941 gcaactatta cagtggatca agtagcaact tgcaaagaaa tgttgattag tggtgtaggt
     3001 gttacaatct tgccagaaat tatgatgaaa aatatcagca aagaacaatt tgagtttgaa
     3061 aaagtagaaa ttgataatga accgctgatt cgttcgacat ttatgagtta tgatccgagc
     3121 atgttgcaat tgccacaagt tgattcgttt gtaaatctca tggcgagctt tgttgaacaa
     3181 ccaaaggcgt agtcttaaac taatttaagg ttagtattta attttaaact attcggttaa
     3241 gttgaacgca gttgtttgct aatgcaccaa cagcaaaaga gcccctaatt aataaattaa
     3301 aaggggacaa aggaatacag ttggttgcta atgcaccaac tgcataagag cccctaatta
     3361 ataaattaaa aggggac
//
LOCUS       DAKPJH010000172         3181 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.175, whole genome shotgun sequence.
ACCESSION   DAKPJH010000172 DAKPJH010000000
VERSION     DAKPJH010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.175"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(15..90)
                     /locus_tag="OY092_002570"
     tRNA            complement(15..90)
                     /locus_tag="OY092_002570"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(55..57),aa:Ala,seq:tgc)
     gene            complement(114..187)
                     /locus_tag="OY092_002571"
     tRNA            complement(114..187)
                     /locus_tag="OY092_002571"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(151..153),aa:Pro,seq:tgg)
     gene            complement(208..284)
                     /locus_tag="OY092_002572"
     tRNA            complement(208..284)
                     /locus_tag="OY092_002572"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(248..250),aa:Arg,seq:acg)
     gene            complement(290..378)
                     /locus_tag="OY092_002573"
     tRNA            complement(290..378)
                     /locus_tag="OY092_002573"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(342..344),aa:Leu,seq:taa)
     gene            complement(386..460)
                     /locus_tag="OY092_002574"
     tRNA            complement(386..460)
                     /locus_tag="OY092_002574"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(426..428),aa:Gly,seq:gcc)
     gene            complement(494..566)
                     /locus_tag="OY092_002575"
     tRNA            complement(494..566)
                     /locus_tag="OY092_002575"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(531..533),aa:Lys,seq:ttt)
     gene            complement(573..648)
                     /locus_tag="OY092_002576"
     tRNA            complement(573..648)
                     /locus_tag="OY092_002576"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(613..615),aa:Thr,seq:tgt)
     gene            complement(665..740)
                     /locus_tag="OY092_002577"
     tRNA            complement(665..740)
                     /locus_tag="OY092_002577"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(705..707),aa:Val,seq:tac)
     gene            complement(753..867)
                     /gene="rrf"
                     /locus_tag="OY092_002578"
     rRNA            complement(753..867)
                     /gene="rrf"
                     /locus_tag="OY092_002578"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(1425..2912)
                     /gene="lysS"
                     /locus_tag="OY092_002579"
     CDS             complement(1425..2912)
                     /gene="lysS"
                     /locus_tag="OY092_002579"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HCX1077479.1"
                     /translation="MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEW
                     DQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEF
                     DLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFRGLQDIEQRYR
                     QRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTH
                     HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAY
                     ADYHDIMDLTESMVRHITNEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFY
                     EVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLA
                     KKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDE
                     DYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK"
     gene            complement(2965..3057)
                     /locus_tag="OY092_002580"
     CDS             complement(2965..3057)
                     /locus_tag="OY092_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077480.1"
                     /translation="MVNDKVLETSKEMYVEQKCLIFYKTLKENV"
BASE COUNT          960 a          692 c          481 g         1048 t
ORIGIN      
        1 gtgtaaaaaa taaatggtgg agactagcgg gatcgaaccg ctgacctcct gcgtgcaaag
       61 caggcgctct cccagctgag ctaagccccc ataaaatgga atttaagaag taatcgggaa
      121 gacaggattc gaacctgcga ccccttggtc ccaaaccaag tgctctacca agctgagcta
      181 cttcccgtta ttcaattaat ttaaaaatgg cgcgcccgat aggagtcgaa cccataacct
      241 cttgatccgt agtcaaacgc tctatccaat tgagctacgg gcgctaaaat ggtgccgagg
      301 accggaatcg aaccggtacg gtgatctctc accgcaggat tttaagtcct gtgcgtctgc
      361 cagttccgcc accccggcaa aataatggag cagaagacgg gattcgaacc cgcgacccca
      421 accttggcaa ggttgtattc taccgctgaa ctacttctgc attattttgc taaatataaa
      481 aattaaatcg taatgagcca tagaggattc gaacctctga ccctctgatt aaaagtcaga
      541 tgctctacca gctgagctaa tggctcaaaa gatggtgccg gccagaggac ttgaaccccc
      601 aacctactga ttacaagtca gttgctctac caattgagct aggccggcta tatctaagaa
      661 taaatggtgg agaatgacgg gttcgaaccg ccgaccctct gcttgtaagg cagatgctct
      721 cccagctgag ctaattctcc gatttgtcat ttgcctggca acgttctact ctagcggaac
      781 gtaagttcga ctaccatcga cgctaaggag cttaacttct gtgttcggca tgggaacagg
      841 tgtgacctcc ttgctatagt caccagacaa aataacttac taatttatga tacacgctta
      901 attaataagg tgcaatagtt aattttacac tttgttgtga actttgtcac atcagctttt
      961 agtgtgtttc gtctgttttt gacgactttt atatattact tcattcaatt gataaagtca
     1021 acacttttaa tcaacttttt tattcttcaa aactgacatt tctcgtgctc tctaattcat
     1081 aacactttta gtattctatc atacacatat gtacaaaacc atacacattc tatacaattt
     1141 taaagtactt ttatagctga ttaagataaa ttatactaat atagcaattt ttgttataag
     1201 atatctcaat gtctatcgtt aacatttctc atccgaacta ctctatatac gtatcgtcat
     1261 tttcatctat cagccaacta ccttgtttaa cagtcaaaaa tagcaccatt atcgttaact
     1321 attactatca aaaacattca aacacgaact aattaccata attaagaaaa ccctcgcata
     1381 cacatgttgt atacacgaga gctcttacta acaatcaacg tcatttattt ttgtctcata
     1441 taagggaata ataacacgtc tctgattgat ggagagtcag ttaataacat aaccaatcta
     1501 tcaataccga taccaagacc acctgtcgga ggcataccat attctaacgc ttcaatgtaa
     1561 tcttcatcca tttcatgcgc ttcatcatta ccttgcgctt tttcaacaag ttgcgcttca
     1621 aaacgacctt tttgatcaat aggatcattt aattcagtaa atgcatttgc atgctctcta
     1681 cctacaatga acaattcgaa acgatcagta aatctaggat cttcaggatt tttcttcgct
     1741 aaaggtgaaa tttcagtcgg atgaccatag ataaacgttg gctgaataag tgtttcttca
     1801 actttttgct caaagaattc atttaaaata tgaccatatt tcattgtatc tttaatttca
     1861 ataccatgtt ctttagctaa agctttagct tcttcatcac ttttaacttc ataaaaatct
     1921 acaccagtag cttcttttac agcatcaaca atatgcaaac gagtccaagc agattctaaa
     1981 tcaatcgttt ccccattgta ttgtactttt gcagaaccta atacttcatt ggtaatatgt
     2041 ctcaccatag attctgttaa atccataatg tcatgataat ctgcatatgc ttcatataat
     2101 tcaatcattg tgaattcagg gttatgtcta gttgatacac cttcattacg gaatactcta
     2161 ccaatttcat atactttttc aagtccaccg acaattaaac gttttaaatg caactcaata
     2221 gcaatacgca tgtataacgt tgcatctaat gcattatgat gtgttacaaa tggtctagca
     2281 gctgcgccac cagcaatttg gtgcatcata ggtgtttcta cttccaagaa acctttatta
     2341 tttaaataat tacgcatttc ttgaatgatt ttactacgat taataaatgt acgagtgcta
     2401 tcttcgttcg taattaaatc taaatatctt tgacgatatc tctgttcaat atcctgtaaa
     2461 ccgcggaatt tatctggtaa tggtcgcaat gatttagtta gtagcgtgaa tttcttcgct
     2521 ttaaccgata attcgccagt atttgttttg aacattacac cttcaacacc aacgatatcg
     2581 cctaaatcag catttttcca taaatcaaat tcgtcatcgc caacttgatc tttacgaacg
     2641 taaatttgaa tttgtccagc taagtcctga acgtgtgcaa atcctgcttt acctttacca
     2701 cgcttagtca ttaatcgtcc agctatagcg acatgactat ccgcttcttt ttctaccaat
     2761 tcttctttag aatactggtc ccactcttct ttcaaatcac tagataaacc tgaacggtca
     2821 aatttagaac caaacgggtc tataccaaga tcatataatt cttgtaattt ttgacgtcga
     2881 accaacattt ggtcattcat ttcttctgac ataactttct ctcctttaac ttgttgtaat
     2941 cctttagtat tccaactggt acactcaaac attttccttt aaagttttat aaaatatcag
     3001 acatttttgc tcaacataca tctctttcga tgtttctaat actttatcat taaccattac
     3061 accttaaagt tatgatgtgg catgttttct tatattcata acatcaattt tatcactttt
     3121 ttaattttac aagaggttgt aaatgtaata aagcaatttc tgttttcgtt tatgaattac
     3181 t
//
LOCUS       DAKPJH010000173         3146 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.176, whole genome shotgun sequence.
ACCESSION   DAKPJH010000173 DAKPJH010000000
VERSION     DAKPJH010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.176"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(612..809)
                     /locus_tag="OY092_002581"
     CDS             complement(612..809)
                     /locus_tag="OY092_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077481.1"
                     /translation="MNCYDEIFNTIKELIENKEISSYQINKDTGISYGNINAMRRRER
                     RIENLSLKNAKILYEYAKKVL"
     gene            complement(1302..2642)
                     /gene="glnA"
                     /locus_tag="OY092_002582"
     CDS             complement(1302..2642)
                     /gene="glnA"
                     /locus_tag="OY092_002582"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HCX1077482.1"
                     /translation="MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQL
                     EKVLDNEMMFDGSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTD
                     GTPFEGDPRANLKRVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFD
                     LAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKL
                     VVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKDKENAFFDPNTEMGLTETAYQF
                     TAGVLKNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRI
                     EVRSVDPAANPYMALAAILEAGLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPS
                     TLYTALKAMRENEVIKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY"
     gene            complement(2661..3029)
                     /locus_tag="OY092_002583"
     CDS             complement(2661..3029)
                     /locus_tag="OY092_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCX1077483.1"
                     /translation="MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERT
                     EGQKRLFSLNDLERLLEIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDAT
                     QKPIGETLPINRGDLSRFIK"
BASE COUNT          960 a          574 c          426 g         1186 t
ORIGIN      
        1 taattttttc cttaattctc ttgtcataaa taccacctcc ctatttaatg tggtaaaggt
       61 cttttgccct ttaccttttt aaaagaacga tttgataaaa ttaagtactt gaattattaa
      121 gctcgtcaca gctattcgaa atttaatttt gctattcgtt ctttttcttt aaccattctt
      181 atcatttttt ctcctttcct ctttatagtt atttaacatt ccacaaattg gggtaagtga
      241 catgttgaac tcccatatcc actggcaaga tttataattt gtaattctaa agtataatag
      301 cctatatttt tcaaaatctc tttttttatg attaacatcc ctctaagtgc acctaaaggt
      361 ttttatgtaa tgtattaaat atttccattt atacatatac atcttgtata aaaagaaaga
      421 actccatata tactcaaaag gtatactgaa gctctatata ttgtataaaa ttattatact
      481 attttgaaaa acataagtaa atcactaaac atgatttctt tcacttttag aaaactttta
      541 atactataaa agcacccact cagtcactag tttgggcagt tattgtatgc ctattgaact
      601 caatgcttat attacaatac ctttttcgca tattcatata agatctttgc attctttaag
      661 cttaaatttt ctattcttct ttctctacgg cgcatagcat taatattacc gtaacttatc
      721 ccagtatctt tattaatttg ataactcgat atctctttgt tttctatcaa ttctttgatt
      781 gtattgaata tttcatcata gcaattcata aattagatga ggagaaattt ttaatttttt
      841 agaatatcaa tagtagtata actaaaatga aaataccgat cgataaacaa aaagatattt
      901 tttgttttgt ttctcttttc atatagtatt acccccttaa taatgcgtag taaggtccct
      961 cttttcgggg tcttacctta gaacgttctg caaatgaatt cgatgagaag taatatgaat
     1021 atggctattt tcaagtaata ctcaacgttt tcgcgacgtt cttttatcgc ctcatctcat
     1081 cacctccaaa tatattaaaa ttcatgtgaa ctaaaatata aaatggtctt ccccagcttt
     1141 aaaaaaataa atacataaaa catttacttg accaaaactt gaccaaatcc attttttaac
     1201 aaaagtggtc aagtgaaatc ccatctttcc aaatcaaaaa agagctaaag caaaacgctc
     1261 tagcccttga tattactgat ttcccatcat tgtttagcgt attaatattg cttcatgtac
     1321 tgatctcttt cccattcaga tacttgagtt ctgtagtaat cccattcaat tgattttgaa
     1381 ttaataaatt gattatagat atgatttcct aaagcttttt taataacttc attttcacgc
     1441 attgctttta atgctgtgta aagtgttgaa ggtaagtctt gaatgcctac tgcttcacgt
     1501 tcttcacgat tcatttcgta aatattttgg ttaacaggtt ctggaacttt taatttattt
     1561 ttaataccgt ctaaaccagc ttctaaaatt gcagctaatg ccatatatgg gttcgcagct
     1621 gggtcaactg aacgtacttc aatacgagtt gataatcctc ttgaagatgg tacacggatt
     1681 aacggtgaac ggtttttacc gctccatgca atataacatg gtgcttcata accaggaact
     1741 aaacgtttgt atgagtttac taatgggtta cataccgctg taaatccacg tgcgttttta
     1801 agtacaccag ctgtgaattg gtaagctgtt tctgttaagc ccatttcagt attcggatca
     1861 aagaatgcat tttctttatc tttgaataat gaaacattaa agtgcatacc gctaccgttc
     1921 acaccaaata atggtttagg catgaatgtt gcatgtaaat tatgcttacg tgcaattgtt
     1981 ttaacaacca atttaaatgt ttggatgtta tcacatgctg taactgcatc cgcatattta
     2041 aagtcgattt catgttgacc cggtgcaact tcatggtgac tagcttcaat atcgaagccc
     2101 atatcctcta attctaaaac aatatcacga cgacagtttt ctcctaaatc tgtaggtgct
     2161 aaatcgaaat atccaccatc atcattaagt tctaaagttg gttctccttt ttcatccaac
     2221 ttaaacaaga agaattctgg ttcaggccct aggttaaagt ctgtgaagcc taaatcttcc
     2281 atttctttta atacacgttt taagtttgca cgtggatccc cttcaaatgg cgtaccatct
     2341 gttttatata catcacaaat taaacgtgct actttacctt gaccagcagt ccatgggaag
     2401 attacccaag tatctaaatc tggatgtaaa tacatgtcag attcttcgat acgtacgaaa
     2461 ccttcgatag aagaaccgtc aaacatcatt tcgttatcaa gtactttttc taattggctt
     2521 acaggcactt caacattttt aattgttcct aaaatatcag tgaattgtaa tcttaaatat
     2581 cttacatttt cctcttctgc aaatttacga atgtcgtctt tagtgaaagt acgttttggc
     2641 attttaaaat cctccaaatt ttatttaata aatcgggata aatcaccacg atttattggt
     2701 aaagtttctc caataggctt ttgcgtggca tctacaatca tcttttttct tatctcttgt
     2761 tcatctgttg ttaaatgctc ttgtgagtca taaatgattt gtttaatccc tttgatatta
     2821 aatccttttt ctaaaagtga tttaatttct agtaatcttt ccaaatcatt gagtgagaac
     2881 agacgttttt gaccttctgt tctttcaggt ttgatgagtt catgtgtttc atagtaacgt
     2941 atttgccttg gcgttaaatc cgttaattta cttactacac tcatagagaa gacagccata
     3001 tttcgtctga ttgcatcatt cgatatcatt gttcctctcc tctacttttg aacttgttaa
     3061 taacttatca taattttttt aggatttcaa aaatatgtca ggttttctga cataaaactc
     3121 aaaacattga tataactgca attttg
//
LOCUS       DAKPJH010000174         3128 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.177, whole genome shotgun sequence.
ACCESSION   DAKPJH010000174 DAKPJH010000000
VERSION     DAKPJH010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.177"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            138..404
                     /locus_tag="OY092_002584"
     CDS             138..404
                     /locus_tag="OY092_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077484.1"
                     /translation="MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAH
                     TLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD"
     gene            548..856
                     /locus_tag="OY092_002585"
     CDS             548..856
                     /locus_tag="OY092_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077485.1"
                     /translation="MTVNIVFSIVFCISMVILGIYVAITKDFTLISYINQTTIADKHK
                     NQIAYIFTLCISLSAVFLMSSILCFEYDFIALSFLFLTIALLLIALFYVCFYKITKYP
                     "
     gene            complement(964..1167)
                     /locus_tag="OY092_002586"
     CDS             complement(964..1167)
                     /locus_tag="OY092_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077486.1"
                     /translation="MLINAIKVGIEMKYKISLAYNLAIIIGSLIILCILISRGYDIYV
                     ILIPILTILASLINLICDIKKHK"
     gene            complement(1178..2371)
                     /locus_tag="OY092_002587"
     CDS             complement(1178..2371)
                     /locus_tag="OY092_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCX1077487.1"
                     /translation="MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQS
                     SLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKKILYLSDLILSLIIIIIPLLAITSNL
                     NYLTLLTISTAITIINCYTDPAFRAILPEIIDEEHLATSNALIDSLQRGSNIILPALI
                     GVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKEDFSETWEFLKKSKE
                     IPFIIIIQFACILINTGLWRVALPLFISNILKEGVGVYGLATSCLGIASLLMSLIMGL
                     LSEKRLIFKFSIGVLVWGIGLSIINVFPSVAILYIGATLVGLGQSIEGLTRSVAIQIK
                     TPNHLMGKVFSISSTSNYAADTLSLGLISLIIPLLSLSNIFISGGAIISMLSLSGLKF
                     FKKSM"
     gene            complement(2754..>3128)
                     /locus_tag="OY092_002588"
     CDS             complement(2754..>3128)
                     /locus_tag="OY092_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HCX1077488.1"
                     /translation="GQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGP
                     VNPDNPGLSKDRAKPNEPVHSMDKNDKVKKSKIAKKSVANQEKKRAELPKTGAESTQK
                     GLIFSSIIGIAGLMLLARRRKN"
BASE COUNT         1102 a          520 c          390 g         1116 t
ORIGIN      
        1 tttcatatta agcggtaata atataataat taataccgcg acctatttaa ttgttttcgc
       61 gatgaaaaag gtttagaatt acaaaaataa ctattttaaa tttagttaca aatatatttt
      121 agaaaggatg tgaaataatg aaaggctcta aacaaatact tttgattatg ggcattatat
      181 ctcttattgt tttatttatt tttacactat tcatcatggc acaatatgca aaacattatg
      241 aacaaaaatc cgacagttcc aacgcacata ctttaaactc atcatcagcc ataattgagc
      301 aacatactat gtcgaattta gcgtctctag atttatacgc tcctgttcgt aacattactt
      361 ctagtcgtga tattcatccc atttatttca tgacaaaaga ttaaaacttc ctttttcata
      421 accccattca ttcaactaat aaattaaaaa ttgataaaaa cgtactgttt tttagaaaca
      481 tacatatata agatacgcat tcattactaa aagacagtac attatattct atcaggaagg
      541 tgcaacaatg accgtcaaca tcgtatttag tatcgtattc tgcataagta tggttatatt
      601 aggcatttat gtcgcaataa ctaaagattt cacactaatt tcttatataa atcaaacgac
      661 cattgcagat aaacacaaga accaaattgc atatatattt acgctatgta tcagtttgag
      721 tgcagtattt ttaatgtctt caattctatg ctttgaatat gattttattg cattgtcatt
      781 cttattttta acgatagcat tattacttat cgcattattc tacgtttgct tttataaaat
      841 cacaaaatat ccataaatgt ttgcgatagt gtgttggtta gatttattga tgcgctgtca
      901 ttaagtaatt gtttgcgaaa aaaatacaac cttgtacgaa tacaaagttg cattaatata
      961 gaatcattta tgctttttaa tatcacaaat taaattgatt aaactagcta aaatagtcaa
     1021 aattggaatc aagattacat atatatcata acctctagat attagtatac ataatataat
     1081 tagcgaccct attataattg ctaaattata agccaaacta attttatatt tcatttcaat
     1141 tcccacctta atagcattga ttaaaattct attatgttta catagacttc ttaaaaaact
     1201 ttaaccccga taagctaagc attgaaataa ttgcacctcc tgatataaat atattactta
     1261 agcttagtaa aggtataatt aaacttatca gtcctaaaga taatgtatcc gctgcgtaat
     1321 tcgatgtaga tgagatacta aatactttcc ccatcaaatg atttggcgtt tttatttgaa
     1381 tggcaactga tcttgttagt ccctctatag attgtccaag tcccactaat gttgcaccta
     1441 tatacaatat cgccacactt ggaaacacat taataatcga taaaccaatt ccccaaacta
     1501 aaacaccaat actaaattta aagattaatc gtttttctga cagtaaaccc ataatcaatg
     1561 acattaataa agacgctata cctaaacatg atgtagctag tccatataca ccaacgccct
     1621 cttttaatat attggaaata aacaatggta atgcaacacg ccaaaggcca gtattaatca
     1681 atatgcaggc aaattgaatg attataataa atggaatttc tttagatttt ttcaagaatt
     1741 cccaagtttc agaaaaatct tcttttgagt gtctatcaat catgttgtta tttgtatatt
     1801 ttaaaagtgc attaaaaata aatcctaaaa atagcaatat actgcaaata aaaaagacgc
     1861 caacattacc aactagtatt acaatgacac caattaaagc aggtaaaata atatttgagc
     1921 ctctttgcaa actatcgatt aacgcattac ttgttgctaa atgctcctca tcaataattt
     1981 caggaagaat tgccctaaac gcaggatccg tatagcagtt aataatggtg atagctgtag
     2041 atatggttag aagcgtcaga taatttaaat ttgatgttat tgcaagtaaa ggaataatta
     2101 ttataatcaa acttagtata agatcagata gataaagtat tttcttttta ttatgtttat
     2161 cagaatatgc gccaccgaaa ataccaaata taataaatgg tagtgtttga ctcataacca
     2221 tcattgataa ttttaaagat gattggtttg tcaattcaac agtaaaccaa attatttgta
     2281 acgaaaacag cacaaagcaa ctccgacgta agaaattacc aatcaataaa tatgtaaagt
     2341 ttctattttt caaaacttct aagtacaaca tatttatcac ctctcataaa aataattgaa
     2401 tgcatccacc agctttttta gaccttcttc taaactctct ttatccaaag cgcaattaat
     2461 tctaatataa tttagtcagt taaatatcaa ttatttcgaa atttacatac tacttgaaac
     2521 accatacata acccccaaaa tgactactca gaggttatat tctactaatt atgattatat
     2581 taaatatgaa aatattatca aaaaatcaaa tttataacaa aaatacaccc cttaaagtta
     2641 ggtctttcaa tccaactttt ggggtgtata tcattttcat catattctag gttgttttta
     2701 acaaactaaa tatagtgaat gcaaatcaag tattatttaa ataatgaatt attttaattt
     2761 tttcttctac gtgccaataa cattaatcca gcaattccaa ttatactact aaagatcaat
     2821 cctttttgtg tgctttctgc acctgttttt ggtaattctg ctcgtttttt ctcttgatta
     2881 gctactgatt ttttagcaat tttagatttt ttaactttat catttttatc cattgaatga
     2941 actggttcat ttggttttgc tctgtctttc gataatcctg gattgtcagg atttactggg
     3001 ccacttggat gagttggtct gctcggcttc tctgggtttt caggtccttt tggatctttt
     3061 ggtttctcgc caccaaactc tacaatctta tctactggtt gttttgtgat ctcttctgtt
     3121 ggttgacc
//
LOCUS       DAKPJH010000175         3126 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.178, whole genome shotgun sequence.
ACCESSION   DAKPJH010000175 DAKPJH010000000
VERSION     DAKPJH010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.178"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(55..243)
                     /locus_tag="OY092_002589"
     CDS             complement(55..243)
                     /locus_tag="OY092_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077489.1"
                     /translation="MNKNTVLDEGYVIATILNVFFLLGLIFISHLENLYILIPYVILM
                     GINAIYLVVKVMNFKKNN"
     gene            complement(827..1822)
                     /locus_tag="OY092_002590"
     CDS             complement(827..1822)
                     /locus_tag="OY092_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="HCX1077490.1"
                     /translation="MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADIL
                     EILKIKKAFNVKQCGNILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQK
                     VIEKVIKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFM
                     RSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVAN
                     VKAIKPNRKGDKDIESAIKETSKYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSY
                     GGLLKQKHKILNLDDVEDGNLINASDEDKTTDEEEKAHSITAIWNFEKQNYYLRH"
     gene            2274..2855
                     /locus_tag="OY092_002591"
     CDS             2274..2855
                     /locus_tag="OY092_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000991705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077491.1"
                     /translation="MNAIQNSISLRKILVVSLSILTILSMVLDFNFKEAQAQNKNNIA
                     DKNVETLNEKEIEKELKYIYGKIIILDKDGTAKDVNLENAKSRYGYVPEGFQKLKNDI
                     ENKKKTSSISPRAVGGNYKNSGDCFYSEVLNSYGELLTGNIITAVFEDVKAKNLKGVA
                     KKLAKIGIKGNLAGIAATMVSKDVQCNLKYGLL"
BASE COUNT         1138 a          521 c          379 g         1088 t
ORIGIN      
        1 aaaaaaacag tgtgaaaaca agaagaaact cgtttcaaaa tcccctcaaa tattctaatt
       61 attctttttg aaattcataa ccttaacaac caaataaata gcatttattc ccatcaaaat
      121 aacatacgga attaatatat ataaattttc caaatgagat ataaaaatta atccaagtaa
      181 aaagaaaaca tttaaaatag ttgctataac gtaaccttca tctaacactg tgtttttatt
      241 caaaataaac actccttttt taaaaaactt tatcacaaga cttactcaaa ttataaatac
      301 ctttattttg agttttaagg gggtatttta aaggtttagg ggggtatcat ataggttttt
      361 aacttaaaaa tatatacaag ctcttaaaac gcaaatatga gccaaataaa tatatggtaa
      421 tttcacaaac aaaaatttca gcaaaaccag tgactaattt tttaacactg cccatttaca
      481 tgcaaattaa aaattagcat aaaatccttt aaaacttcca catgtttttc taaattcctg
      541 cagggcgttt tttatcaaaa atcgagaatt tttaattttt ctctaaaaac tccgtaagag
      601 cataaggaga atttgctatc attcaaaaat gataggtctg gcaaagccag acattccagg
      661 ggttttaagg tattttaaag tgatatcata caaagctgta ctgtcttatt tttgtgacac
      721 aatatattgc gtttgtctta tttttgtgac actacataca gcatttgtca caaaaataag
      781 acagtacttt tttataaaaa atcaacaaaa aagacattag tcaacactaa tgtcttaaat
      841 aataattttg cttttcgaaa ttccaaattg cggtaattga atgtgctttt tcttcttcgt
      901 ctgttgtttt atcttcatca cttgcattaa tcaaattacc atcttcgaca tcgtctaagt
      961 ttaaaatttt atgtttttgt ttaagcaatc caccataact taacatacgt tttcgataca
     1021 aacctttttc taaatcactt acaatttctt gatttttttc atcatcatca gttaaaaaat
     1081 cagatgattt aaccgaatat tttgaggtct ctttgattgc cgattcaatg tctttatcgc
     1141 cttttctatt cggtttgatc gctttaacat tagcaacagg tcgatagtca acttgtaatg
     1201 ctctttgcca taaattaacc cattcttctt gagttatata attctctttt tttctaaaat
     1261 atgcattttc aacacataac aaaacatgca tgtgctgatt ataactaccg tcatttttat
     1321 taacggtaac ttctgttgaa cgcataaatc caacaagatt ttgtttaacc tttttatatc
     1381 tactcaacct atcaaatgct ttagttagat gcttcaaact ttgttctaaa gtatctccat
     1441 ctatcgcatt ttttgttgaa agtgttaaaa acaaccaacg tgcttttggc ttttccttaa
     1501 ttactttttc aatcactttt tgagcttgat aactattttt catagcacgt ctccaattac
     1561 aaaccggaca taattttgat ttacaaaacc atgtcttatg taacttcaaa tagccttcat
     1621 cagttggctt aaattctaaa atattaccac attgttttac attaaaagcc tttttgattt
     1681 ttaaaatttc tagtatatct gcatagctta cattatctat tttcttttct ctccatgggc
     1741 gttgtttccc acttttcgtc atatctttta acgttttatt atcttgattt tcggttatac
     1801 ttctagtagt attatattgc atataaaaag acccccagta ttatttaaga ttcgacacct
     1861 taataatata actggggttt tttattgtca aattttcctt tcacgcacaa aaacacgttt
     1921 aaacactgta atatcaacag ttacagctat atatataaaa tcgagttatt tctatatagt
     1981 atcaagacaa gaagaaactc gttcacactc gtttcaaaaa acaacctatt ccttcttctt
     2041 tttatgaccc tctaaaccta aataaattaa tgtgaaaacc aatgaataaa taaaactttc
     2101 taaaaagtca aaaggattat caaataaaat cgaattaaca aaattaaaaa ttaaaaatac
     2161 agataataaa ataatcaaaa agtaaaaaaa cttattcata ttaaactcct ttgtttttat
     2221 atgttaatat tatattgaat tcatttaaat aacaaaacaa gggggcattt acaatgaatg
     2281 caattcaaaa cagtatatca ctaagaaaga ttttagtagt atctttaagt attttaacca
     2341 tactttcaat ggtcttggat tttaatttca aagaagctca agcccaaaac aaaaataaca
     2401 ttgcagataa aaacgttgaa actttaaacg aaaaagaaat tgaaaaagaa ctaaaataca
     2461 tatatggcaa aattattatt ttagataaag acggaacagc taaagatgtt aatctagaaa
     2521 atgccaaatc tcgatatgga tatgttcctg aaggattcca aaaactaaaa aacgacatag
     2581 agaataaaaa gaaaactagt tcaatatcac ctagagcagt tggtgggaac tacaaaaata
     2641 gcggtgactg tttctattct gaagttttaa actcatatgg agaactttta actggaaaca
     2701 taatcacagc agtttttgaa gatgttaaag ccaaaaactt aaagggcgta gcaaaaaaat
     2761 tagctaaaat tgggataaaa ggaaacctag ctggaatcgc agctactatg gtttcgaagg
     2821 atgtacaatg taatcttaaa tacgggttac tttagatact atttattcca attgctttat
     2881 tgacgttgag cctcggaacc cttaacaatc ccaaaacttg tcgaatggtc ggcttaatag
     2941 ctcacgctat gccgacattc gtctgcaagt ttagttaagg gttcttctca acatcaataa
     3001 attttctcgg cataaatgcg tcgtctattt tttattatct tcatgataat catatttttc
     3061 ttccatctcc tcaaaagcat catctttata gaaaaacaaa aagtaagcaa caacaccaat
     3121 aggaat
//
LOCUS       DAKPJH010000176         3071 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.179, whole genome shotgun sequence.
ACCESSION   DAKPJH010000176 DAKPJH010000000
VERSION     DAKPJH010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.179"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            41..673
                     /locus_tag="OY092_002592"
     CDS             41..673
                     /locus_tag="OY092_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077492.1"
                     /translation="MNHLKTYQSEDYYIHDKQFVIEGPLTYEDLKALTFDAHLTAFRD
                     AEDQYEALLEITTLPEGRIYVARQDQLIVGYVTFHYPDEIERWSTGNLPYLIELGAIE
                     VSINFRQLQLAEKLIQLSLSTPEFEDYIVITTEYYWHWDLKNSKLDVFDYKKLMQRLM
                     ATGGLEIFATDDPEITSHPANCLMARIGKNITLEQQQAFDDIRYMNRFFF"
     gene            698..1867
                     /locus_tag="OY092_002593"
     CDS             698..1867
                     /locus_tag="OY092_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HCX1077493.1"
                     /translation="MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANL
                     LSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM
                     HRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLA
                     KEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGY
                     GHTVNVPLEPYTEDASFLECFKLTVEPVIKSFKPDIILSVNGVDIHYRDPLTHLNCTL
                     HSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLP
                     LEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ"
     gene            complement(1965..2954)
                     /gene="ccpA"
                     /locus_tag="OY092_002594"
     CDS             complement(1965..2954)
                     /gene="ccpA"
                     /locus_tag="OY092_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HCX1077494.1"
                     /translation="MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRL
                     NYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDP
                     EKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
                     FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSG
                     AESYKEGVKAFAKMKGNLPDAILCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRL
                     VEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPHRIEYRGTTK"
BASE COUNT         1010 a          530 c          491 g         1040 t
ORIGIN      
        1 aatttaatac aatcacgacg tcgattgagg agttgaaaat atgaatcatt taaagacgta
       61 tcaatccgaa gattattaca ttcatgacaa gcaatttgtt attgaaggac ctttaacata
      121 cgaagatttg aaagcgctta ctttcgatgc gcatttaacc gcatttagag atgctgaaga
      181 tcagtatgaa gctttgttag aaattacaac attaccagaa ggtagaattt atgttgctcg
      241 ccaagatcaa ctcattgtgg gttatgtcac tttccactat cctgatgaaa ttgagcgctg
      301 gtctacaggt aaccttccat atttaatcga attgggggca attgaagtca gcatcaattt
      361 taggcaatta caacttgcag aaaagctgat acaacttagc ctttctacac cagaattcga
      421 ggattatatc gttataacta cagaatatta ctggcattgg gatttaaaaa attcaaagtt
      481 agatgtattt gactataaaa aattaatgca gcggttaatg gcaactggtg gacttgaaat
      541 attcgctaca gatgatccag aaataacaag tcatccagct aattgtttaa tggcaagaat
      601 tggcaaaaac attacattag aacagcaaca agcgtttgat gatattcgtt atatgaatcg
      661 gtttttcttt taatttttgg aatatcggag ggattatatg caacaacatt catcaaaaac
      721 tgcatatgtt tattcagata agttattaca atatcgattt catgaccaac atcccttcaa
      781 tcaaatgcgt ttaaaattaa caacagagct acttttgaat gcaaatttat tgtctcctga
      841 acaaatagta caacctagaa ttgcaacaga tgacgaatta atgttaattc ataaatatga
      901 ttacgtcgaa gctattaagc atgcttcaca tggcattatc agtgaagatg aggctaagaa
      961 atatggatta aatgatgaag agaatggtca atttaagcat atgcaccgcc atagcgccac
     1021 aattgttgga ggcgctttaa ctttagcaga tcttattatg tcaggcaaag tattaaatgg
     1081 ttgtcactta ggtggtggat tgcatcacgc tcaacctggt cgagcaagtg gtttttgtat
     1141 atacaatgat attgcaatta ccgcacaata cttagctaaa gaatacaatc aacgcgtttt
     1201 aatcatagat accgatgcac atcatggaga tggtacacaa tggagtttct atgccgataa
     1261 ccatgttact acttattcta tccatgaaac tggaaaattt cttttcccag gctctggtca
     1321 ctatactgag cgcggtgaag atatcggcta tggacacact gtaaatgtcc cacttgaacc
     1381 gtatacagaa gatgcatcat ttttggagtg ttttaaatta acagttgagc ctgtcataaa
     1441 gagttttaaa cctgatatta ttctaagcgt aaatggtgtc gatatacatt atcgtgatcc
     1501 actaactcat ctaaattgta cgttacattc attatatgaa attccatatt ttgtaaaata
     1561 tttagctgat tcttatacga atggaaaggt aattatgttt ggtggcggag gctacaatat
     1621 ttggagagtc gtaccacgtg catggagtca tgtattctta agtttaattg atcaaccaat
     1681 tcaaagtggt tatttaccgt tagaatggat taataaatgg aaacattatt catctgaatt
     1741 attacctaaa agatgggaag atcgtttaaa tgattatacc tatgtccctc gcacaaaaga
     1801 aattagtgaa aaaaataaaa aattagcttt acatatagcg agttggtacg aatctactcg
     1861 tcaataagta acctaatctg caacgatttt aaaagataaa taaaaggcat tcttccaaca
     1921 cccatataat tcgggtcgtt agatgaatgc ctaattttgt gaatttattt tgtagttcct
     1981 cggtattcaa ttctgtgagg taaaactaca tttggttctt ctatcttttc atcattcata
     2041 tattttgtta ataagcgcat ccctactgca ccgatatcat ataatggttg aataacacta
     2101 gaaagttgtg gtctaaccat ctcaactaaa cgtgtattat tgaaactaat aatttgtaat
     2161 tcctctggaa ctttaatacc agcatccatt gcactatgca taataccaat agcttcttcg
     2221 tcactaatac ataatatagc atctggaaga ttacctttca ttttggcaaa agcttttacg
     2281 ccttctttat aactttcagc accagaacaa ttcaatgtat cacctaattg aagaccattt
     2341 ttatttaaca cttcagttaa accttctaaa acatcttctt gagctttttt agaatgttct
     2401 ccacctacta aagcaaatga tttagcgcct ttttcaatta attctcccgt aatttctttc
     2461 gcagcttcag taaaatcaat attaactgat gctatatgtg catccttacc atttgttcct
     2521 gatactacta caggtacaga tgattgattt atcaattctt tcatttcttc agtaattgta
     2581 ccaccaagga aaataatacc atcaacttgt ttacttaata agttattaaa aatttctttt
     2641 tccttttcag gatcgttatc tgaatttgaa ataattgagt gatatttata cattgttgca
     2701 atatcttcaa gtccacgagc aagttgtgaa taatagatat tagatatatc tggaatgatc
     2761 acacctactg ttgttgtctt tttactagct aaacctctag caacagcatt tggacgataa
     2821 ttcaaacgct taatgacttc gttaacttta tttttagttt ctgctttaac attttggttc
     2881 ccattaacaa cacgcgacac tgtggccata gagacacgcg cttctcttgc tacatcatat
     2941 atagtaactg tcataatttc ctccttgtaa acgttttatt cattataata acatgttttc
     3001 atttcatttt catagtttac catattttaa tttacagtaa catatttttg tttggaaaaa
     3061 tttagcgaaa a
//
LOCUS       DAKPJH010000177         3051 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.180, whole genome shotgun sequence.
ACCESSION   DAKPJH010000177 DAKPJH010000000
VERSION     DAKPJH010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.180"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            15..2924
                     /gene="sdrC"
                     /locus_tag="OY092_002595"
     CDS             15..2924
                     /gene="sdrC"
                     /locus_tag="OY092_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin SdrC"
                     /protein_id="HCX1077495.1"
                     /translation="MNNKKTATNRKGMIPNRLNKFSIRKYSVGTASILVGTTLIFGLS
                     GHEAKAAEHTNGELNQSKNETTGTSENKTTEKVDSRQLKDNTQTATADQPKVTMSDSA
                     TVKETSSNMQSPQNATANQSTTQTSNVTTNDKSSTTYSNETDKSNLTQAKDVSATPKT
                     TTIKPRTLNRMAVNTVAAPQQGTNVNDKVHFSNIDIAIDKGHLNKDTGKTEFWATSSD
                     VLKLKANYTIDDSVKEGDTFTFKYGQYFRPGSVRLPAQNQNLYNAQGNIIAKGIYDSK
                     TNTTTYTFTNYVDQYTNVSGSFEQVSFAKRENATTDKTAYKMEVTLGNDKYSKDVIVD
                     YGNKKGQQLISSTNYINNEDLSRNMTVYVNQPKNKYTKETLVTNLTGYKFNPDAKNFK
                     IYEVTNQNQFVDSFTPDTSKLTDVTDKFKITYSNDNKTATVDLLNGQSSSDKQYIIQQ
                     VAYPDNSSTDNGKIDYTLETQNGKSSWSNSYSNVNGSSTANGDQKKYNLGDYVWEDTN
                     KDGKQDANEKGIKGVYVILKDSNGKELDRTTTDENGKYQFTGLSNGTYSVEFSTPAGY
                     TPTTANAGTDDAVDSDGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQ
                     DSTEKGIKGVKVTLQNEKGEVIGTTETDENGKYRFDNLDSGKYKVIFEKPAGLTQTGT
                     NTTEDDKDADGGEVDVTITDHDDFTLDNGYYEEETSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSYSDSDSDSDSDSDSDSDSDSDSDSDSDSDSYSDSDSYSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDRDSDSDR
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDNDSDSDAGKHT
                     PAKPMSTVKDQHKTAKALPETGSENNNSNNGTLFGGLFAALGSLLLFGRRKKQNK"
BASE COUNT         1212 a          497 c          559 g          783 t
ORIGIN      
        1 aggagtatta ttaaatgaat aataaaaaga cagcaacaaa tagaaaaggc atgataccaa
       61 atcgattaaa caaattttcg ataagaaagt attctgtagg tactgcttca attttagtag
      121 ggacaacatt gatttttggg ttaagtggtc atgaagctaa agcggcagaa catacgaatg
      181 gagaattaaa tcaatcaaaa aatgaaacga caggcacaag tgagaataaa acaactgaaa
      241 aagttgatag tcgtcaacta aaagacaata cgcaaactgc aactgcagat cagcctaaag
      301 tgacaatgag tgatagtgca acagttaaag aaactagtag taacatgcaa tcaccacaaa
      361 acgctacagc taatcaatct actacacaaa ctagcaatgt aacaacaaat gataaatcat
      421 caactacata tagtaatgaa actgataaaa gtaatttaac acaggctaaa gatgtttcag
      481 ctactcctaa aacaacgact attaaaccaa gaacattaaa ccgtatggct gtgaacacag
      541 tagcagcacc acaacaaggt acaaatgtta atgataaagt tcatttttca aatattgata
      601 ttgctattga taaaggacac ttaaataaag atactggcaa aactgaattt tgggcaactt
      661 caagtgatgt tttaaaatta aaagcgaatt acacaatcga tgattctgtt aaagagggcg
      721 atacatttac ttttaaatat ggtcaatatt tccgtccagg ttctgtaaga ttacctgcac
      781 aaaatcaaaa tttatataat gcccaaggta atattattgc aaaaggtatt tacgatagta
      841 aaacaaatac aacaacgtat acttttacga attatgtaga tcaatataca aatgttagcg
      901 gtagctttga acaagtttca ttcgccaaac gtgaaaatgc aacaactgat aaaactgctt
      961 ataaaatgga agttacatta ggaaacgata aatatagtaa agacgtcatt gtcgattatg
     1021 gtaataaaaa aggacaacaa ctcatttcaa gtacaaacta tattaacaat gaagatttat
     1081 cacgtaatat gactgtttat gtaaaccaac ctaaaaataa atatacaaaa gaaacattag
     1141 taacaaattt aactggttat aaatttaatc cagatgctaa aaactttaaa atttatgaag
     1201 taactaacca aaatcagttt gtggatagtt tcaccccaga tacttcaaaa cttacagatg
     1261 tcactgataa atttaaaatt acatacagta atgataataa gacggcgaca gtagatttat
     1321 tgaatggtca atctagtagt gataaacaat acatcattca acaagttgct tatccagata
     1381 atagttcaac agataatggg aaaattgatt atactttaga aacacaaaat ggaaaaagta
     1441 gttggtcaaa cagttattca aatgtgaatg gctcatcaac tgctaatggc gaccaaaaga
     1501 aatataatct aggtgactat gtatgggaag atacaaataa agatggtaaa caagatgcca
     1561 atgaaaaagg gattaaaggt gtttatgtca ttcttaaaga tagtaacggt aaagaattag
     1621 atcgtacgac aacagatgaa aatggtaaat atcagttcac tggtttaagc aatggaactt
     1681 atagtgtaga gttttcaaca ccagccggtt atacaccgac aactgcaaat gcaggtacag
     1741 atgatgctgt agattctgat ggactaacta caacaggtgt cattaaagac gctgacaaca
     1801 tgacattaga tagtggattc tacaaaacgc caaaatatag tttaggtgat tatgtttggt
     1861 acgacagtaa taaagatggt aaacaagatt cgactgaaaa aggaattaaa ggtgttaaag
     1921 ttactttgca aaacgaaaaa ggcgaagtaa ttggtacaac tgaaacagat gaaaatggta
     1981 aataccgctt tgataattta gatagtggta aatacaaagt tatctttgaa aaacctgctg
     2041 gcttaactca aacaggtaca aatacaactg aagatgataa agatgccgat ggtggcgaag
     2101 ttgatgtaac aattacggat catgatgatt tcacacttga taatggttac tacgaagaag
     2161 aaacatcaga tagcgactca gatagcgact cagattcgga cagcgactca gactcagata
     2221 gcgactcaga ttcggacagc gattcatact cagatagcga ctcagattca gacagcgatt
     2281 cagactcaga tagcgactca gactcagata gcgactcaga ttcggacagc gattcatact
     2341 cagatagcga ctcatactca gatagcgact cagattcaga cagcgactca gattcagata
     2401 gcgattcaga ttcagacagc gactcagact cagacagtga ttcagattca gatagcgact
     2461 cagattcaga tagcgattca gattcagata gcgactcaga ttcagatagc gattcagatt
     2521 cagacagcga ctcagattca gatagcgact cagactcaga cagagattca gattcagaca
     2581 gagattcaga ttcagatagc gactcagact cagatagcga ctcagactcg gatagcgatt
     2641 cagattcaga cagcgactca gattcagaca gcgactcaga ttcagacagc gactcagatt
     2701 cagatagcga ttcggactca gacaacgatt cagattcaga tgcaggtaaa catactccgg
     2761 ctaaaccaat gagtacggtt aaagatcagc ataaaacagc taaagcatta ccagaaacag
     2821 gtagtgaaaa taataattca aataatggca cattattcgg tggattattc gcggcattag
     2881 gatcattatt gttattcggt cgtcgtaaaa aacaaaataa ataatatgat taacttaacc
     2941 aggtccatgt ggcctggttt tttctgttta gaaattccca gatataaaac aaaaaatctt
     3001 taaggaatag atacaattta atttgttaca gaaatgtaat tgtctatgaa t
//
LOCUS       DAKPJH010000178         3003 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.181, whole genome shotgun sequence.
ACCESSION   DAKPJH010000178 DAKPJH010000000
VERSION     DAKPJH010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.181"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..629
                     /locus_tag="OY092_002596"
     CDS             <1..629
                     /locus_tag="OY092_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000581879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1077496.1"
                     /translation="KNLDDFYDKEGFRDQEFDKGDKGTWIISSEMNIQLKGESLKSRG
                     MILYMNRNTRRTTGYFFVSETKGKTYEKERKYPVKMEHNQIIPTKPIQDDKLKKEIEN
                     FKFFVQYGNFKDINDYKNGDISYNPNVPSYSAEYQLRNDDYNVQQLRKKYDIPTKQAP
                     KLLLKGDGDLKGSSVGSKELEFTFVENKKENIYFSDNIDYKPTERDEL"
     gene            626..1900
                     /locus_tag="OY092_002597"
     CDS             626..1900
                     /locus_tag="OY092_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077497.1"
                     /translation="MMKSDYQINSGNITSHSEETSAVSKIGYEIENANNNNLGVEKIR
                     RQIVKLQKKDSFPKNLKYVDSYTDPKTGTTTSAFLNKDTGKVTLGMTGTNVNKDASET
                     LKDFGADVNIGLHIVTDKDPHYKNTQDFIKNIKKDYDIDIITGHSLGGRDAMILGMSN
                     DIKHIVVYNPAPLAIKDVSGLYADEDELKKLIEKYDGHIVRFVSDEDELDAVVRNHLY
                     ETAGEKIVLKNGEGHSMSGFLISGTQAIILAELNKVKGYQDENNKSLKSVRKQTRHRL
                     HKVETLRANWIQTTGGSLSSSQQQLLEALTALTIAEGLNQLVNEESQHLKKMYHAMAH
                     KFGDNWKKTQEVGNEIGEKLTSEEVIDELRKGGAYESKLETDPKRKIDDKIKKLNDVY
                     KNCNGYIAKIKQSIEAIVSNDQMLASQIDGMM"
     gene            1900..2226
                     /locus_tag="OY092_002598"
     CDS             1900..2226
                     /locus_tag="OY092_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077498.1"
                     /translation="MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMY
                     DHFLYLKHKMNYSEDAMIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSD
                     RIEGDE"
     gene            2229..2516
                     /locus_tag="OY092_002599"
     CDS             2229..2516
                     /locus_tag="OY092_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077499.1"
                     /translation="MGLDFSGLPDLAVLEQMKEKEQISEVIAPEHVRMHHDHQNKLKS
                     DEKILLDQMVSHFKKFEDDFKNAAQGAWVKNATDELKDISNDLEKIQDIKV"
     gene            2833..2940
                     /locus_tag="OY092_002600"
                     /pseudo
     CDS             2833..2940
                     /locus_tag="OY092_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649608.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
BASE COUNT         1236 a          363 c          555 g          849 t
ORIGIN      
        1 ccaaaaatct cgatgatttt tacgataaag aaggctttcg agatcaagaa tttgacaaag
       61 gagacaaagg tacttggata atcagctctg aaatgaatat tcaattaaag ggagaaagtt
      121 taaaatcaag aggaatgatt ctatatatga atagaaatac aagaaggaca acaggttatt
      181 tttttgtaag tgaaacaaaa ggaaaaacgt atgaaaaaga aagaaaatat ccagtcaaaa
      241 tggaacataa tcaaattatc ccaacgaagc caatacaaga tgacaagttg aaaaaagaaa
      301 ttgaaaactt taaatttttt gtacaatatg gcaattttaa agatattaat gattataaaa
      361 atggtgatat ttcatataat cctaatgtgc ctagttattc agcggaatat caattgagga
      421 atgatgatta taatgtgcaa cagttaagaa aaaaatatga cataccaacg aaacaagcac
      481 cgaaactgtt attaaaaggc gatggtgatt taaaaggatc atctgtaggg tctaaagagt
      541 tagaatttac ttttgtcgaa aataaaaaag aaaatattta cttttctgat aatattgatt
      601 ataaaccgac tgagcgagat gaattatgat gaaatcagat tatcaaatta attcaggtaa
      661 tataacaagt cattctgaag aaacaagtgc agtgtcaaaa attggctatg aaattgaaaa
      721 tgccaataat aataatttgg gggtagaaaa aatcaggagg caaattgtaa agttacaaaa
      781 aaaggacagt ttccctaaaa atttaaaata tgtcgatagt tatacagacc caaaaacagg
      841 tacgactaca agtgcctttt taaataaaga cacaggcaaa gttactttag gtatgacagg
      901 tactaatgta aacaaagatg caagtgaaac gctaaaggat tttggggccg atgtcaatat
      961 tggccttcat atagtcacag ataaagatcc acattataaa aatacccaag actttatcaa
     1021 aaatatcaaa aaagactatg atattgatat tattaccgga cattcgctgg gcggtagaga
     1081 tgcgatgatt ttaggtatga gtaatgatat taaacatatc gttgtgtata atccagcgcc
     1141 attagcgatc aaagatgtga gtggtcttta tgccgatgaa gatgaactta aaaaattgat
     1201 tgaaaagtac gatggtcaca ttgtaaggtt cgtgtctgat gaagacgaat tagatgcagt
     1261 tgtccgcaat catttatatg aaactgctgg ggaaaaaata gtacttaaaa atggagaagg
     1321 ccattcaatg agtggttttt taataagcgg aacacaggct ataatcttag ccgaattaaa
     1381 caaagttaaa ggctatcaag acgaaaataa taaatcatta aaatccgttc gtaaacaaac
     1441 gaggcataga ttacataaag tagagacgtt aagagcgaat tggattcaaa caacgggtgg
     1501 atcactctct tcctcccaac aacaattatt agaagcttta acagcactaa ccattgccga
     1561 aggcttaaat caattagtga atgaagaaag ccaacatttg aaaaaaatgt atcacgcgat
     1621 ggcacataaa tttggagaca actggaaaaa aacgcaagaa gttggaaatg aaattggtga
     1681 aaaattaacc tctgaagagg ttatagatga attaagaaaa ggtggcgcgt atgaaagtaa
     1741 acttgaaaca gatcccaaaa gaaaaattga tgataagata aagaaattaa atgatgttta
     1801 taaaaattgt aatggctata tcgcaaaaat taaacagagt atcgaagcaa ttgtttctaa
     1861 tgaccaaatg ttagcgagcc agattgatgg gatgatgtaa tgtttactac gtataaaaat
     1921 attaatgaac ttgaaaatgc ctatgatgaa gaaagaaaac aattgaatga tgcattcaat
     1981 caaattgatg aattaagaca tcaaacacgc aagaaatgtg aacaaatgta tgatcatttc
     2041 ttatatctca aacataaaat gaattatagt gaagacgcta tgatcaggat gacacgtatt
     2101 atagaatctt tcgatagaga aacgaatcaa cgtatccgac atcacgaaat gaaattagaa
     2161 gattataaag atgagttaag aagagaatat ctaaaacaat ctgacagaat tgaaggagat
     2221 gaataagcgt gggacttgat tttagtggtt taccagattt agcagtattg gaacaaatga
     2281 aggaaaaaga acagattagt gaggttattg cgcctgaaca tgttcggatg catcatgatc
     2341 atcaaaataa gctgaaaagt gatgagaaaa tattacttga ccaaatggta agtcatttta
     2401 aaaaatttga agatgatttt aaaaatgcgg cacaaggggc ttgggtgaaa aatgccacag
     2461 acgaattaaa agatattagt aatgatttag aaaaaattca agatattaaa gtataaaaag
     2521 gtattaagaa acacaataag tatataatcc atttaataat aaatgaatta tatagttcat
     2581 aatttcgact ataagtggct attagccatt atttttcggg atctgtgtca aatcggacta
     2641 atgaattcaa taatggaagt taagcaacca atctttgttt aacttctttt ttattttttg
     2701 gaaaataaag ttttgaacat aataaaattt gattatgttt taacgaattt tgatgtttct
     2761 tgaactatat atcatctagt cgtcatttac aattggtaaa tatgacttca aactgtatga
     2821 aggtgatggc gattaaaagg ctcatccgta ggttctaaag aactagaatt taactttata
     2881 agaaataaag aagaaaatgt gtatttttct gatagtatta atttcaaacc tactgaatag
     2941 agttaataga agtttgaaat aaaaatttca taaagtgttc aaaataattt ttcgctttag
     3001 ttg
//
LOCUS       DAKPJH010000179         2963 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.182, whole genome shotgun sequence.
ACCESSION   DAKPJH010000179 DAKPJH010000000
VERSION     DAKPJH010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.182"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            132..503
                     /locus_tag="OY092_002601"
     CDS             132..503
                     /locus_tag="OY092_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HCX1077500.1"
                     /translation="MLKKWLGMALITPILTFIIWVFNSHTIITYLNILFYVSLIIFIS
                     IFLILLVQEGIFDATSYGFRRLKYQMSSSKKKKSISDDPFFNPQEVKKEHYFVSTWII
                     PLLLINILYFIMTIVLSLILV"
     gene            complement(558..1802)
                     /gene="fabF"
                     /locus_tag="OY092_002602"
     CDS             complement(558..1802)
                     /gene="fabF"
                     /locus_tag="OY092_002602"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HCX1077501.1"
                     /translation="MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDT
                     EPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRI
                     GVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLCAKGPNGA
                     TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIET
                     ACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE
                     GEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSS
                     TKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITY
                     AMSNSLGFGGHNAVLVFKKFEA"
     gene            complement(1814..2755)
                     /locus_tag="OY092_002603"
     CDS             complement(1814..2755)
                     /locus_tag="OY092_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HCX1077502.1"
                     /translation="MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHW
                     ADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK
                     VASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGDG
                     AGAVIIGEVSEGRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDAS
                     TRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPL
                     SIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKWGK"
BASE COUNT          906 a          583 c          438 g         1036 t
ORIGIN      
        1 ttgctttaaa ctaatgaaga atgattgatt ttagaatttc aataaagctg aagaaattaa
       61 aaaatcattc ctcaatgtct cattttaatg taaactatgc gtaagagttt tctataagtg
      121 ggagtgatca aatgttgaaa aaatggcttg gaatggcact aataacgcca atattaacgt
      181 ttattatatg ggtttttaat agccatacta tcattacata tttaaatata ttgttttatg
      241 tttcattaat tatttttatt agcatatttt tgattttact tgtacaagaa ggcatttttg
      301 atgcgacaag ttatggtttt agaagattaa agtatcaaat gtcatcttcg aaaaagaaga
      361 agtctatctc tgatgatcca tttttcaacc cacaagaggt aaaaaaagag cattactttg
      421 tttctacatg gataatcccc ttattattaa taaatattct atattttatt atgacgattg
      481 tgctgtcgct catcttagta taaagaaaca gaaaaaatct tcagtaacta aaacaacgtt
      541 actgaagatt tttataatta tgcttcaaat ttcttgaata ctaatactgc gttatgtcca
      601 ccgaatccta agctattact cattgcataa gtaatatcaa ggtcttgcgc ttcatttgga
      661 acaatatcca aatcacattc tgggtctggt gttaccgcat gaattgtcgg tgcgacttta
      721 gagtctttaa ttgaaagcgc tgagaagatt gcttcaattc cacctgttgc accaagtaag
      781 tgaccagtca ttgattttgt tgagctaact tttaagtgtt tagctgcttc accaaatgta
      841 tttttaatag ctttaacttc atttaagtca ccaacaggag tacttgtacc atgggcattt
      901 aagtattgta catctttagg ttcaatacca gcatcatcca tagctgcttg cattgctcta
      961 gaaccgcctt caccttctgg agctggcgct gtaatatgat aagcatcacc tgtagtacca
     1021 tagccaacta tctcagcata aatattggca cctcgagctt gtgctgattc taaagattcg
     1081 attactaaaa taccagcacc ttcacccata acaaaaccgt ctctaccttc ttggaatgga
     1141 cgacatgctg tttcaatgtc atcatttgta gaaagcgctc gacttgcact gaaaccagca
     1201 attgccatat gagtaattgg tgcttctgta ccaccagtaa tcattgcatc tgcatcaccg
     1261 cgttgcacaa ttttaaatgc ttctccgatt gaatttgtac ctgttgcaca tgctgtaact
     1321 gttgcaccat ttggtccttt tgcacataag tcaattgata cttgcccagt tgccatatca
     1381 ggaattaaca ttggtacgaa aaatggactc acacgtcttg ggcctttatc cattaattgt
     1441 ttatgtgcaa tttcaaatgt ttccatacca ccgataccag aaccaatcca tacaccgatt
     1501 cgatctgcag tattttcatt gatatctaat tgcgcatctt taacagcctc tctagctgct
     1561 acaattgcat attgagtaaa tctatccata cgacgcgctt cttttttgtc gatatgatct
     1621 tcaatattaa agtttttaag ttctcctgct aagtgaacgc tataaggttc agtatcgata
     1681 cgtgtaattt tatcgatacc atttacgcct tttagagcat tctcccatgt tgttttgaca
     1741 tcattaccga ttggagaaag ggctcccata cctgtaataa ctactctttt attttgactc
     1801 attcgttatc ctcctatttt ccccatttta ttgtcattgc gccccaagtt aggccgccac
     1861 cgaatccgac aagaacaatt gtatcatcat ctttgagttt accatttttt aattcttgat
     1921 cgatacttaa aggtattgac gcagctgaag tatttccata tttatttaca gaaacactca
     1981 ttttgtcttt tgaaatacct aagcgttctc tagctgattc cataattcta atattagctt
     2041 gatgaggaat aaataaatct atatcatctg atgttaaatt cgctttttca actacacgtg
     2101 ttgatgcatc acccataatt ctaacagcaa atttaaatac ttctcgacca ttcattttca
     2161 gtttaccagt atctttatct aaatataaat gtttaccacc agtgccatca gaacccattt
     2221 cataacttat aatacctctg ccttctgaaa cttcaccgat aataaccgca cctgcaccat
     2281 ctccaaatag aactgcagta gaacggtcag ttaaatctgt tattttagat aatttatctg
     2341 caccgacaac taaaatatta tgataatctc cagattgaac atattgttta gctgtaatca
     2401 ttgaatacat aaatcctgaa catgctgcaa gttgatccat agaggcaact ttgcccgtcc
     2461 ctaaacgttc ttgcaacata tttgcgacag ttggaaatgg catatctcca gttgctgtgg
     2521 caacaattat catatctata tcttcgggct gaataccagc gtcagcgatt gcttttacac
     2581 ttgcttcata tgctaaatct gaagtatctt gatcgtcatc tgcccaatgt ctttctttaa
     2641 ttccagtcat cttagaaatc cattcatcag atgtatctaa aaattgctca aaataggcat
     2701 tgtcaataat cttttctggt gcatatgcac caaaaccttt aatacccacg ttcatagttg
     2761 aacaccttct taataaaatt tttaatacca ggtattaatt taacatagat tactttttaa
     2821 actcaagtca gaggtaggaa tattgactag ttaataaaat tttaatgctt tattatcgtc
     2881 aaattccagt atgaaatttg ttttaatgtg cttaaattag aatagccatt cagataaaat
     2941 catttattta aactgtataa tat
//
LOCUS       DAKPJH010000180         2858 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.183, whole genome shotgun sequence.
ACCESSION   DAKPJH010000180 DAKPJH010000000
VERSION     DAKPJH010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.183"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..195
                     /locus_tag="OY092_002604"
                     /pseudo
     CDS             1..195
                     /locus_tag="OY092_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001558444.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            248..532
                     /locus_tag="OY092_002605"
     CDS             248..532
                     /locus_tag="OY092_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001581821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077503.1"
                     /translation="MTEFTPFFDGSNQLNYLKFVILRFHGISKRKICKMYNFAYFRIL
                     EVCEMAKKNDYRFTYKDYKFLKQYGVSNTFICKMYHISIEDLEFFEVMNR"
     gene            683..1003
                     /locus_tag="OY092_002606"
     CDS             683..1003
                     /locus_tag="OY092_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000805733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF961 family protein"
                     /protein_id="HCX1077504.1"
                     /translation="MKPVLDIKKTLGQLNFLGVDEKYKYENGERTDKTVYAYKLASQE
                     QGEQITVKTPNKVELNYLQECELVEPDVKMYVQMSGDFGTIAYSWNAEDIKVVGSNSA
                     LKQK"
     gene            1017..1319
                     /locus_tag="OY092_002607"
     CDS             1017..1319
                     /locus_tag="OY092_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000386891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077505.1"
                     /translation="MDYYTADRLYRYTNSSNLSEPILNYVASRINWGDKVSLMTLAKE
                     IQSKFNDSYVKENTVKGRPKIYADLCLLCMSLSEAGHGRMLQVNLEDCIYIGDIDV"
     gene            1494..2585
                     /locus_tag="OY092_002608"
     CDS             1494..2585
                     /locus_tag="OY092_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000172946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HCX1077506.1"
                     /translation="MTLKSQCTPLTNRGVERTNKSAVEAVVDWVQVTFHIAPISAVIE
                     DVIGLPITLFKKRNSGIYFYNRGYEFSNIKLYYSSDDESMGIHLQLTGTGCREFEHHL
                     QQLNKTWQDFFDKCLSVNANFTRIDIAIDDYKTYLKVPLLIKKAEKAECVSRFRAGSA
                     INGFNLSDGRSKGATFYIGSKQSNLYCRFYEKNYEQAFKRHCDVEDIGLWNRYEIQMR
                     KAYAVNCAKVLSRTDNISEIVKSILHNNLRFISPPKDGNDKNRKRWPLYRPWALFIKD
                     TEKLNLTTRPTLKSIEDNLDWLCKQVATTLDTVLTAESMAQSEGLLTDTDFLDKILAH
                     SQFNDEHTNRINHYLEALKQKKHLSKDKC"
     gene            2646..>2858
                     /locus_tag="OY092_002609"
     CDS             2646..>2858
                     /locus_tag="OY092_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HCX1077507.1"
                     /translation="MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFY
                     SLLAILLILLLASFIKATRANNDSKEA"
BASE COUNT         1017 a          338 c          541 g          962 t
ORIGIN      
        1 atttcattga ttattcaagg attcactgca gaatttacaa ttagtttaat tagtaaggca
       61 aatattcata ataatcatga atttgctgtg aacttattta gatatgtcat acaagaaggt
      121 ggtatttctt ttagtacata tctagtgtgt aacttttgca taataatgtg gttattattt
      181 tcgtgttctt tattaggtgg tgtaaactct agttaacagt taattcttat gaaaggaatt
      241 gataattatg actgagttta cacctttttt tgatggttca aatcaattaa attatcttaa
      301 atttgtaatt ttaagatttc atggtatttc taaaagaaaa atttgtaaaa tgtataattt
      361 tgcatatttt cgtatattag aagtttgtga aatggcaaaa aagaatgatt atcgatttac
      421 ttataaggat tataaatttt taaaacaata tggtgtgtct aatacattta tttgtaagat
      481 gtatcatatt tcaattgaag acttagaatt ttttgaggtg atgaaccgat aggtttgatt
      541 aaaaatatga taggtcagga gaagcataga cactccatta tcaaaaatgc agtggtacgg
      601 atttgcggga gttattccta ttcgtgcgac cctttagaag tcgtttaatt ttattaaaaa
      661 ttttgtaaag gatggatata ttatgaaacc agtattggat attaaaaaaa ctttaggaca
      721 attaaacttt ttaggtgtag atgaaaaata taaatatgaa aatggagagc gtactgataa
      781 aactgtttat gcatataaat tagcgagtca agagcaaggc gaacaaatca ctgttaaaac
      841 gcctaataaa gtagaattaa actatttaca agaatgcgaa ttagttgaac cagacgttaa
      901 aatgtatgtt caaatgtcag gcgattttgg aactatcgca tatagctgga atgcagaaga
      961 tattaaagta gttggttcta atagtgcact taaacaaaaa taattaggtg atgtaaatgg
     1021 attattatac agcagataga ttatatcgct acacaaatag ttcaaatttg agtgaaccta
     1081 ttttaaacta tgttgctagt cgtataaatt ggggcgataa agtttcatta atgactttag
     1141 ctaaagaaat acagtctaaa tttaatgata gttacgttaa agaaaatacg gtaaaaggtc
     1201 ggcctaaaat ttacgctgac ctttgtctat tgtgtatgag cttgagtgaa gcaggacatg
     1261 gcagaatgct acaagtgaat ttggaagatt gtatttatat tggcgatatt gatgtttaac
     1321 atatagtatt agtgatttaa catgaccgtg tagcttttag cgtatgcagg cgcagaaatg
     1381 caagcacgga gtgcgttaag catttgggcg gagcctgcga caaatacgcg ttaagaaagc
     1441 aagaacggtc atgtatcaaa tcgcttgcga tttgatagga ggcataaata aatatgactt
     1501 taaaaagcca gtgtaccccc cttactaata ggggggtaga gcgtacaaat aaaagtgccg
     1561 tggaggcagt tgttgactgg gttcaggtca ctttccatat agcccctatt tcagcagtga
     1621 ttgaggacgt tatcggtttg cctataacgt tgttcaaaaa acgaaatagt ggcatttact
     1681 tttataatcg tggttatgaa ttttcaaaca ttaaattgta ttattcaagt gatgatgaat
     1741 caatgggcat tcacttacag ttaactggta caggttgtag agagtttgaa catcatttac
     1801 aacagttgaa taaaacttgg caagattttt ttgataaatg tttatcagtt aatgcaaatt
     1861 ttacaagaat tgatattgca attgatgatt ataaaacata tttaaaagtg cctttattaa
     1921 ttaaaaaggc tgaaaaagct gagtgtgttt cacgttttag agctggaagc gcaataaacg
     1981 gttttaattt gtcagacgga agaagtaaag gcgctacttt ttatattggt tctaaacaaa
     2041 gcaatttata ttgtcgtttt tatgaaaaga attatgaaca agcgtttaaa cgtcattgtg
     2101 atgtcgaaga cattgggtta tggaatcgtt atgaaataca aatgcgaaag gcatatgcag
     2161 ttaattgtgc gaaagttttg agtagaacag ataatataag cgaaattgta aagtctatat
     2221 tgcataataa tttgcgtttt atctctcctc ctaaagatgg aaatgataaa aatcgtaagc
     2281 ggtggccatt atatagacct tgggcgttat ttattaaaga tactgaaaaa ttgaatttaa
     2341 ctactagacc aacattaaag tccattgagg ataatcttga ttggttatgt aaacaagttg
     2401 ctactacttt agatacagtg ttaactgccg aaagtatggc gcaatctgag gggttgctta
     2461 cagatactga ttttttagat aaaattttag cgcattcaca atttaatgat gagcatacga
     2521 atagaattaa tcattatttg gaggctttaa aacaaaaaaa gcacttatca aaagataagt
     2581 gttaaaaaaa taactgggat gtgattttta ttaaaaattt cgtaaaggat tttagaaaat
     2641 cgtttatgaa aataataagc aagtacattt taacacgatt ttctaaaaac ggaaagcatt
     2701 ttgatattcc taaagaacaa cgccgagtaa ttccaaaatt taaaaatcgt cgtaagatga
     2761 ttgtaatttg tttttactca ttattagcta ttttgttaat tcttttatta gcttctttta
     2821 ttaaagctac aagagcaaat aatgacagta aagaagca
//
LOCUS       DAKPJH010000181         2857 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.184, whole genome shotgun sequence.
ACCESSION   DAKPJH010000181 DAKPJH010000000
VERSION     DAKPJH010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.184"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..150
                     /locus_tag="OY092_002610"
     CDS             <1..150
                     /locus_tag="OY092_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077508.1"
                     /translation="EKAPPYERERPVAKLFNARDAAYQKIIKQLSDLLPEEKEDTETP
                     SDDYL"
     gene            147..1808
                     /locus_tag="OY092_002611"
     CDS             147..1808
                     /locus_tag="OY092_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HCX1077509.1"
                     /translation="MISNKYVDEYINLWKQGKIILNKERIDLFNYLQKHIYSRDDVYF
                     DEQKIEDCIKFIEKWYFPTLPFQRFIIANIFLIDKNTDEAFFTEFAIFMGRGGGKNGL
                     ISAISDFLSTPLHGVKEYHISIVANSEDQAKTSFDEIRTVLMDNKRNKTGKTPKAPYE
                     VSKAKIINRATKSVIRYNTSNTKTKDGGREGCVIFDEIHYFFGPEMVNVKRGGLGKKK
                     NRRTFYISTDGFVREGYIDAMKHKIASVLSGKVKNSRLFAFYCKLDDPKEVDDRQTWE
                     KANPMLHKPLSEYAKTLLSTIEEEYNDLPFNRSNKPEFMTKRMNLPEVDLEKVIAPWK
                     EILATNREIPNLDNQMCIGGLDFANIRDFASVGLLFRKNDDYIWLGHSFVRQGFLDDV
                     KLEPPIKEWEKMGLLTIVDDDVIEIEYIVDWFLKAREKYGLEKVIADNYRTDIVRRAF
                     EDAGIKLEVLRNPKAIHGLLAPRIDTMFAKHNVIYGDNPLMRWFTNNVAVKVKPDGNK
                     EYIKKDENRRKTDGFMAFVHALYRADDIVDKDMSKALDALMSIDF"
     gene            1824..>2857
                     /locus_tag="OY092_002612"
     CDS             1824..>2857
                     /locus_tag="OY092_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCX1077510.1"
                     /translation="MSILEKIFKTRKDITYMLDLDMIEDLSQQAYVKRLAIDSCIEFV
                     ARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVS
                     DSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES
                     LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLA
                     IAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYGETADLEK
                     NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV
                     SSGSFTRNEVR"
BASE COUNT         1096 a          372 c          561 g          828 t
ORIGIN      
        1 gaaaaggcgc caccatatga aagggaaaga ccagtagcca aactatttaa tgctagagat
       61 gctgcatatc aaaaaataat caaacaatta tcggatttat tgcccgaaga gaaagaagac
      121 acagaaacgc catctgatga ttacctatga ttagtaataa atacgttgat gaatatataa
      181 atttgtggaa acaaggaaag ataattttaa ataaagaaag aattgatctc tttaattatc
      241 tacaaaaaca tatatattca cgagatgatg tatattttga tgaacagaaa atcgaggatt
      301 gtatcaaatt tattgaaaaa tggtattttc caacattacc atttcaaagg tttatcatag
      361 ctaatatatt tcttatagat aaaaatacag atgaagcttt ctttacagaa tttgctattt
      421 tcatgggacg tggaggcggg aaaaacggtc taataagtgc tattagtgat tttctttcta
      481 cgcccttaca cggagttaaa gaatatcaca tctccattgt tgctaatagt gaagatcaag
      541 caaaaacatc gtttgatgaa atcagaaccg ttttaatgga taacaaacga aataagacgg
      601 gtaaaacgcc aaaagctcct tatgaagtta gtaaagcaaa aataataaac cgtgcaacta
      661 aatcggttat tcgatataac acatcaaaca caaaaaccaa agacggtgga cgtgaggggt
      721 gtgttatttt tgatgaaatt cattatttct ttggtcctga aatggtaaac gtcaaacgtg
      781 gtggattagg taaaaagaaa aatagaagaa cgttttatat aagtactgat ggttttgtta
      841 gagagggtta tatcgatgca atgaagcaca aaattgcaag tgtattaagt ggcaaggtta
      901 aaaatagtag attgtttgct ttttattgta agttagacga tccaaaagaa gttgatgaca
      961 gacagacgtg ggaaaaggcg aacccaatgt tacataaacc gttatcagaa tacgctaaaa
     1021 cactgctaag tacgattgaa gaagaatata acgatttacc attcaaccgt tcaaataagc
     1081 ccgaattcat gactaagcga atgaatttgc ctgaagttga ccttgaaaaa gtaatagcac
     1141 catggaaaga aatactagcg actaatagag agataccaaa tttagataat caaatgtgta
     1201 ttggtggttt agactttgca aatatccgag atttcgcaag tgtagggcta ctatttcgaa
     1261 agaacgacga ttatatttgg ttaggacatt cttttgtaag acaagggttt ttggatgatg
     1321 tcaaattaga gccacctatt aaagaatggg aaaaaatggg attattgacc attgtagatg
     1381 atgatgtcat tgaaattgaa tatatagttg attggttttt aaaggctaga gaaaaatatg
     1441 ggcttgaaaa agtcatagct gataattata gaactgatat tgtaagacgt gcgtttgagg
     1501 atgctggcat aaaacttgaa gtacttagaa atccaaaagc aatacatgga ttacttgcac
     1561 cacgtatcga tacaatgttt gcgaaacata acgtaatata tggagacaat cctttgatgc
     1621 gttggtttac taataatgtt gcagtaaagg ttaaacccga tggtaataaa gaatatatta
     1681 aaaaagatga aaatagaaga aaaaccgatg ggttcatggc ttttgttcac gcattatata
     1741 gagcagacga tatagtagac aaagacatgt ctaaagcgct tgatgcatta atgagtatag
     1801 atttctaata gaggaggtga gacatgagta ttctagaaaa gatatttaaa actaggaaag
     1861 atataacata tatgcttgat ttagatatga tagaagatct atcacaacaa gcgtatgtga
     1921 aacgtttagc gattgatagt tgtattgaat ttgttgcgcg agctgtcgct caaagtcatt
     1981 ttaaagtatt ggaaggtaat agaattcaaa agaatgatgt ttactacaag ttaaatataa
     2041 aaccaaatac tgacttatca agcgatagtt tttggcaaca agttatatat aaactaattt
     2101 atgataacga ggttttaatc gtagtaagtg acagcaaaga attacttatc gcagatagct
     2161 tttacagaga agagtatgct ttgtatgatg atatattcaa agatgtaacg gttaaagatt
     2221 atacttatca acgtactttc acaatgcaag aggtcatata tttaaagtac aacaacaata
     2281 aagtgacaca ctttgtagaa agtctattcg aagattacgg gaaaatattc ggaagaatga
     2341 taggtgcaca attaaaaaac tatcaaataa gagggatttt gaaatctgcc tctagcgcat
     2401 atgacgaaaa gaatatagaa aaattacaag cgttcacaaa taaattattc aatactttta
     2461 ataaaaacca actagcaatc gcgcctttga tagaaggttt tgattatgag gaattatcta
     2521 atggtggtaa gaatagtaac atgccttttt ctgaattgag tgagctaatg agagatgcaa
     2581 taaaaaatgt tgcgttgatg attggtatac ctccaggttt gatttacgga gaaacagctg
     2641 atttggaaaa aaacacgctt gtatttgaga agttctgttt aacaccttta ttaaaaaaga
     2701 ttcagaacga attaaacgcg aaactcataa ctcaaagcat gtatttgaaa gatacaagaa
     2761 tagaaattgt cggtgtgaat aaaaaagacc cacttcaata tgctgaagca attgacaaac
     2821 ttgtaagttc tggttcattt acaaggaatg aggtgcg
//
LOCUS       DAKPJH010000182         2845 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.185, whole genome shotgun sequence.
ACCESSION   DAKPJH010000182 DAKPJH010000000
VERSION     DAKPJH010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.185"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(350..1009)
                     /locus_tag="OY092_002613"
                     /pseudo
     CDS             complement(350..1009)
                     /locus_tag="OY092_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001561168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1828 domain-containing protein"
     gene            complement(1027..2156)
                     /locus_tag="OY092_002614"
     CDS             complement(join(1027..1910,1910..2156))
                     /locus_tag="OY092_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558209.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCX1077511.1"
                     /translation="MTRERRSFSSEFKLQMVRLYENGKPRNEIIREYDLTPSALGKWI
                     KQHQNTGTFNHQDNLSDEEKELIKLRKEVQHLKMENDIFKASSADHGTKIEVIQKNAH
                     QYSVSAMCKVLKIPRSTYYDSIKRRDNKNTKDDSNVERAVINIFNSNRKVFGTRRIKN
                     NLNDKGLTVSRRKIARIMKKHNLVSVYTKAKYKNHPKETNEKRIKNHLNRAFNREQPM
                     ETLVSDLTYVKVGGTWHYICLFIDLFNREIVGYSAGKNKDANLVSKAISRINHNLEQI
                     KLFHTDRGKEFDNHLIDEVLETFKIKRSLSTKGCPYDNAVAEATMKAMKTEFVKQMQF
                     ENLEQLETELFDYVNWYNNFRPHSSLQYLTPVAFKNLHMKTV"
     gene            2227..2751
                     /locus_tag="OY092_002615"
     CDS             2227..2751
                     /locus_tag="OY092_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCX1077512.1"
                     /translation="MQSDWQSSGVPFLRARDIVAYNKGEDIKEPLFISYDKYNEYSSI
                     SDKVENGDLLVTGVGTIGVPFLIKDNTPLYFKDGNIIWLKNRGSLDEYFLFYSFINAN
                     IQSYIKKVAGVGTVGTYTIANAKKTPIFEPIKLEQLKIGGFFNKIDNLIKLQVHKVEI
                     IKQRKQGLLQKIFM"
BASE COUNT          912 a          404 c          403 g         1126 t
ORIGIN      
        1 aatgtatttt tacttttata atcttttagt cgacatgatt ctccagtgga aatgataatt
       61 taataacgta catttatgat tgtttaagaa tgtacaattt tttaacactc tagaggtaaa
      121 tctatctagg taatccgaat tctccgttaa tttaacggaa atacaatgaa ttgttagttt
      181 tcttaaaaga gcaagtgtca aatacgtatc aagaaaaagt ttttctgact ctttgacctt
      241 gttctttttt gttctaaaat aaaacgtgca aataaaaaag ttatctgctt ttctatttgc
      301 acgatatggt ttggaaatta aagaatataa ataagggact actgctaatt tatgaggtta
      361 aagtttcaat gatttttgat ttattagacc attttaatat ctcaaggttt tcatgttctg
      421 ctacagtttg tgctctttca tttatcggat gatctacatc atttacaatt atcaacatga
      481 taggttctaa tttgtttctg gatggtctgt ttggtttgat atcacggtaa atataagctt
      541 cattagttat tttgttgaaa tttaagttgt ttgtaaagtt aactagtttt tctggttgtg
      601 attttgtttc agaaacaata taatcaatag aatattttaa acctgattct ccagaaacag
      661 aaacttgtgc taaacctctt atttcttggt catataagaa ttcaaatact tcttcataga
      721 atatgtttgt aacgttagat ttagtagtta aagtaaggtc ataaattttc aatatgcctt
      781 gaattaaatt atgtttagac tgagcaaaac tctcattttt aacatccgct gtaatttctt
      841 tatcaactaa ttttaaatta aattgattta aaatattttg tataagttta gttctcgttt
      901 ttgtgtttat atcaataccc aacatttcta attcattaat cgtcaatccg tcatctgata
      961 gacaaatttc attattaggt agtgtatcag catatattct aataaaattg gtatgtcaac
     1021 atttttttag acagttttca tgtgtagatt tttaaatgcc actggcgtca aatactgtaa
     1081 tgaagaatgt ggtctaaaat tgttgtacca atttacataa tcaaataatt ctgtttctaa
     1141 ctgttctaag ttttcaaatt gcatttgttt tacaaattcg gttttcattg ctttcatcgt
     1201 tgcttccgca actgcgttat cataaggaca acctttggta cttaatgaac gtttgatttt
     1261 aaatgtttct aggacttcat ctatcaaatg attatcaaat tctttgcctc tatcagtgtg
     1321 gaatagtttg atttgttcaa gattatgatt tattctgctg attgcttttg atactaaatt
     1381 tgcgtcctta tttttacctg cactgtaacc aacaatttct ctattaaata gatctataaa
     1441 taaacatatg taatgccatg ttcctccgac ttttacatat gtcaaatcac ttactaatgt
     1501 ctccattggt tgttctctat taaaagcgcg attcaaatga tttttaattc gtttttcatt
     1561 agtttctttt ggatgatttt tgtatttagc tttcgtataa acagaaacta gattatgttt
     1621 tttcatgata cgagctatct ttcgccttga tacagtaaga cccttgtcat ttaaattatt
     1681 tttaattcgt cttgtaccaa agacttttct attagaatta aaaatattta tgacagcacg
     1741 ttctacgttt gaatcatctt tagtgttttt attatctctt ctttttatag aatcataata
     1801 agtacttctt ggtattttta ggactttaca cattgctgat actgaatatt gatgtgcatt
     1861 cttttgaatg acttctattt tcgtcccatg atcagcgctg cttgctttaa aatatcgttc
     1921 tccattttta aatgttgaac ttctttacgt aatttaatca gctctttttc ttcatctgat
     1981 aagttatctt ggtgattgaa tgtacccgtg ttttgatgtt gctttatcca ttttcctaac
     2041 gccgaaggtg ttaaatcata ctcgcgtata atttcattcc taggcttacc attttcatat
     2101 aatctaacca tttgtaactt aaactctgaa ctaaatgatc ttctttctct tgtcataata
     2161 aaatcgccta ctttcttaaa ttaacaatat ctattctcat agaatttgtc caattaagtg
     2221 tagacgattc aatcagactg gcaatctagt ggagtaccct ttttaagagc aagagacatt
     2281 gtggcatata ataaagggga agatattaaa gaacccctat tcatatctta tgataaatat
     2341 aatgaatata gctcaatatc agataaagtt gaaaatggcg atttattagt aacgggtgtg
     2401 ggcacaattg gagtaccatt tttaataaaa gataatacgc cgctttactt taaagatggt
     2461 aatattattt ggttaaagaa tagagggagt ttggatgaat attttctatt ttattctttt
     2521 ataaatgcaa atattcaaag ctatataaaa aaagtggcag gtgtgggtac tgttggcaca
     2581 tacacaatag ctaatgcaaa aaaaacacca atttttgaac caataaaatt agaacaatta
     2641 aaaatagggg gatttttcaa taaaatcgat aatttaatta agttacaagt tcacaaagta
     2701 gaaataatta aacaacgtaa acaagggtta cttcagaaaa tatttatgta attcttataa
     2761 ctacctattt tgtatagtaa agatataaaa ccacaaatgt aaatatactt ttaataaatt
     2821 gtggtatatt aatattgaga caatc
//
LOCUS       DAKPJH010000183         2800 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.186, whole genome shotgun sequence.
ACCESSION   DAKPJH010000183 DAKPJH010000000
VERSION     DAKPJH010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.186"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            31..300
                     /locus_tag="OY092_002616"
     CDS             31..300
                     /locus_tag="OY092_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000312840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3892 domain-containing protein"
                     /protein_id="HCX1077513.1"
                     /translation="MAYEIKKIRLTSNANNGTEKISEVLLHNGHSETVSQVVRYLDIG
                     MEYFYTTSYSSKAKVESVHPAGRSPYIRTVGNGTESDNLLSLPRF"
     gene            complement(305..472)
                     /locus_tag="OY092_002617"
     CDS             complement(305..472)
                     /locus_tag="OY092_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000657740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077514.1"
                     /translation="MKEFNEKLQELLERDQNDMIEPIEWSQENEEVSNDETIITTKFK
                     YKVPTPNKRKD"
     gene            complement(506..820)
                     /locus_tag="OY092_002618"
     CDS             complement(506..820)
                     /locus_tag="OY092_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077515.1"
                     /translation="MQERERLIKVTHLQMKHQNLLGQIEAYDKTLKEIKYTRDLYNKH
                     LSMNNEDAFAGLEMVEDEITEKIKKAIKDFQAVSKEIDKLNGVERDDKVTDLTEWRKV
                     NQ"
     gene            complement(835..1083)
                     /locus_tag="OY092_002619"
     CDS             complement(835..1083)
                     /locus_tag="OY092_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002389146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF739 family protein"
                     /protein_id="HCX1077516.1"
                     /translation="MNTNTTFDFSLLNGKIVEVYSTQFNFAIALGVSERTLSLKLNNK
                     VPWKTTDIIKACKLLGIPIKDVHKYFFKQKVQMFELNK"
     gene            1265..1999
                     /locus_tag="OY092_002620"
     CDS             1265..1999
                     /locus_tag="OY092_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016169292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCX1077517.1"
                     /translation="MKDRNLRQVDILEKSKPFQKELNIKMSKSHLSQYVNGRSSPDQH
                     KLFLLSKTLNVGEAWLMGYDVDSYRIPDEERQEETVMSKIRSTASQLTPPRQENVLNY
                     ANSQLDEQNSKGDNIVDINSYKQDKTPVNVNGCVSAGVGERLHDETLFTEMVKAPVPP
                     HDLALKVNGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTL
                     VSLNKKYRDLHFYRNESVRLVGKVIL"
     gene            2017..2628
                     /locus_tag="OY092_002621"
     CDS             2017..2628
                     /locus_tag="OY092_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000716820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077518.1"
                     /translation="MKKIAGLFLASALILGACGGSGEKKEENKKTETKKESKKVNNNS
                     EEKSSAKASPNKNIDNNQIKVDQKNMPQINFNNITDRNTLKSVIYGNYNELDKLKAYN
                     SAVANGVIPQGNVMEGPAIAAFESSLRVESGAEKSIYESSPEKRDYDNNGVYRTEQEQ
                     KAHERWVNDQVEWMNASEAEREEIRKRDAEKYGYEYNPDDYKE"
BASE COUNT          986 a          431 c          491 g          892 t
ORIGIN      
        1 ctactgcgat agataggggg tgaataacat atggcttatg aaatcaaaaa gattaggtta
       61 actagtaatg cgaataatgg gactgaaaaa atcagcgaag tattattgca taacggtcat
      121 tctgaaaccg tttctcaagt tgtaagatat ttagatattg gaatggaata tttctataca
      181 acttcttaca gttctaaagc taaagttgaa tctgttcatc cagcaggacg ctcaccatat
      241 atacgcactg tagggaatgg aacagaatca gataatctac taagtttgcc tagattttag
      301 ttttttagtc cttgcgctta tttggcgtag ggactttata tttaaatttt gttgtaatta
      361 tagtttcgtc attacttacc tcttcatttt cttgtgacca ttcgattggc tctatcatgt
      421 cgttttggtc tctttctaat aattcttgta atttttcatt gaattccttc attcctcatt
      481 cctcctattt caatttaagt gaacgttact gattcacttt tctccattcc gttaaatcag
      541 taactttgtc atcacgttca acgccgttaa gcttatcgat ttcttttgat actgcttgga
      601 aatctttaat agctttttta attttttcag taatttcatc ctctaccatt tccaaaccag
      661 cgaatgcgtc ttcgttgttc atgcttaggt gtttgttgta aaggtctcga gtgtacttta
      721 tttctttaag cgttttgtcg taagcttcaa tttgtcctaa aaggttttga tgcttcattt
      781 gaagatgtgt tacttttatt aacctttctc gttcttgcat gtgttatgcc tcctttactt
      841 attaagttca aacatttgaa ctttctgttt aaaaaaatat ttgtgaacat cttttatagg
      901 tattcccaat aacttacaag ctttaataat gtctgttgtt ttccatggta ctttgttgtt
      961 caacttcaaa gacaaagttc tttctgatac acctaaagct atagcaaagt taaattgtgt
     1021 cgagtacact tcgactatct taccgttcaa taacgaaaaa tcaaaagttg tattagtatt
     1081 caaataatca cctcctaagt tcaaacattt gaactataat aactataacc ccaattttga
     1141 acaatgtcaa cacaaaaagt taaaaaagtt gaacttttgt attgattttt atttcccttc
     1201 ctatataatg aatttcaagg aggcattacc aatgcaaaac acttctgaaa gattaaaaca
     1261 aattatgaaa gataggaact tgcgtcaagt agatattcta gaaaagtcga aaccctttca
     1321 aaaagaattg aatattaaaa tgtcaaaaag tcacttatcc cagtatgtta atggaaggtc
     1381 ttctccagac caacataaat tattcttatt atctaaaact ttaaatgtcg gtgaagcgtg
     1441 gcttatggga tacgatgttg attcttaccg cataccggat gaagagcgtc aagaggaaac
     1501 tgtgatgtca aaaatccgtt caacagcatc ccaactcaca cctccacgcc aagaaaacgt
     1561 acttaactac gcaaatagtc agttagatga acaaaactct aaaggagata acattgtaga
     1621 tattaattca tataaacagg ataaaactcc ggttaatgtc aatggttgcg tctctgccgg
     1681 tgtgggagaa cgtctacacg atgaaacgct attcactgaa atggttaaag cccctgttcc
     1741 tccacatgat ttagcattaa aagttaatgg agattctatg gagcctatgt ttaaagatgg
     1801 cgaaatcata tttgtggaga aaacgcacaa tataaagaat ggtcagattg gtatattcat
     1861 cattgaagaa gaagcgtacg ttaagaaagt ttttgttgaa gatgatagat taactttagt
     1921 ttcactgaac aaaaagtacc gcgaccttca cttttataga aacgaaagtg tgaggttagt
     1981 tggaaaagtt attttatagt taaaggagaa atcaatatga agaaaatagc aggtttattt
     2041 ttagcaagtg cgttaatttt aggtgcatgt ggtggtagtg gagagaagaa agaagaaaat
     2101 aaaaagactg aaactaagaa agagagtaaa aaagttaaca acaacagtga agaaaaaagt
     2161 agtgccaaag catctcctaa taaaaatatt gataataatc aaataaaagt tgaccaaaaa
     2221 aatatgccac aaataaattt taataacatc actgatagaa atactctaaa gtcagttatt
     2281 tacggaaatt ataatgagtt agataaatta aaagcgtata acagtgcagt agcaaatgga
     2341 gtgattccac aaggtaatgt tatggaaggt cctgctattg cagcgtttga aagttcttta
     2401 agagttgaaa gtggtgcaga aaaatcaata tatgaatcgt ctcctgagaa aagagactat
     2461 gataataacg gtgtatatcg taccgaacaa gagcaaaaag ctcacgaaag atgggtgaac
     2521 gatcaagtag aatggatgaa tgcttctgaa gctgaaagag aagaaatacg caagcgagat
     2581 gctgagaaat acggatatga atataatcca gacgattata aagaataaca ttaacaatac
     2641 gaacctttat aaataataga aaattcattt cacagaaggt agtaaaatga atttaaaaga
     2701 agttgacatt aacattgaag agtgggaaat ggttgaaatc cccttttata cagaagaaga
     2761 actgacttat agattgaata atggtttacc tataactaaa
//
LOCUS       DAKPJH010000184         2729 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.187, whole genome shotgun sequence.
ACCESSION   DAKPJH010000184 DAKPJH010000000
VERSION     DAKPJH010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.187"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            157..573
                     /locus_tag="OY092_002622"
     CDS             157..573
                     /locus_tag="OY092_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCX1077519.1"
                     /translation="MKTKEVVALMNISQDTLRYYEKVGVIPPVNRDENGYRIYNDSDL
                     NWIYLVKNLRNAGVSIESLIEFCRLAQLPKNENIQAQQKQILNKQLEELNENLKTIHD
                     ARDLLQYKIDNYDNHIAKINASDNHDANVERLWERK"
     gene            643..1491
                     /locus_tag="OY092_002623"
     CDS             643..1491
                     /locus_tag="OY092_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCX1077520.1"
                     /translation="MNHIEISKDVKIPVLGFGVFQIPQEQTAEAVKEAIKAGYRHIDT
                     AQSYLNETEVGQGIEASGIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDL
                     VLIHQPYNDVYGSWRALEELKENGKIKAIGVSNFGVDRIVDLGIHNQIQPQVNQIEIN
                     PFHQQEEQVAALQQENVVVEAWAPFAEGKNQLFQNQLLQAIADKYNKSIAQVILRWLV
                     ERDIVVLAKSVNPERMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALT
                     SRELDV"
     gene            1711..1836
                     /locus_tag="OY092_002624"
     CDS             1711..1836
                     /locus_tag="OY092_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077521.1"
                     /translation="MTYIPFSIITLITGIIMHMTMYFVKFECWKMPLFMKIIFTI"
     gene            2099..2707
                     /locus_tag="OY092_002625"
     CDS             2099..2707
                     /locus_tag="OY092_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3885 domain-containing protein"
                     /protein_id="HCX1077522.1"
                     /translation="MCFDINNLNIKKLNFRKVKNAIHLSLSGDKYQFLEDGKTINNTY
                     FLAVYDNAINIFEDLFSPSDSINLVHVVYVYNEPYKKTNVIRKFTSLTIDELYYFKEY
                     KKEKDDNILCEEFSYKCSIKDIKYKKLLKAISNKDFKGLVPNINQNDNYSEIYIINNT
                     KNVIYHLYDDRGLWLAFNNNEDYARYSEKYNDLISEFDNEDI"
BASE COUNT         1104 a          324 c          455 g          846 t
ORIGIN      
        1 caatttttaa agtaattaaa aacgatgaaa tgtaaaatgt taaaaaagag acaaatttaa
       61 atttgagtaa taaaataaga agtattcaaa cgaagatggc aatatataaa ccaacataac
      121 tttagacgac caaacataac tgaaaggata gtcgcaatga aaactaaaga agtcgtagcg
      181 ctcatgaata tatctcaaga cactttaaga tattatgaaa aggttggtgt gattccacct
      241 gttaatcgag atgaaaatgg atatagaata tataatgata gtgatttaaa ttggatttat
      301 ttagtgaaaa atttgcgaaa tgcaggcgtc agtattgaat cgcttatcga attttgtagg
      361 ttagcgcagc ttcctaaaaa tgaaaatatt caagcacagc aaaagcaaat tttaaataag
      421 caactcgaag aattaaatga aaacttaaag acaattcatg atgcgagaga cttactacaa
      481 tataaaattg ataattatga taatcatatt gctaaaatca atgctagtga taatcatgat
      541 gccaatgttg aacgtctttg ggagagaaag taaacctatg gcttgctata gagtttgctc
      601 catggtttat agtgagctta caagaaaaag gaggttcatt ttatgaatca tattgaaata
      661 agtaaagatg taaagatacc agtattaggt ttcggagtat ttcaaattcc tcaagaacaa
      721 acagcagaag cggttaaaga agcaattaaa gcgggttata gacatattga tacagcgcaa
      781 agttatttaa atgaaactga agtaggtcaa ggtattgaag cttcaggtat tgatagaagt
      841 gaactattca ttacgactaa agtatggatt gaaaatgtta actatgaaga tactatcaaa
      901 tcaatcgaac gatcattaca acgattaaat ttagactatc ttgatctagt gcttattcac
      961 caaccttata atgatgtata tggctcatgg cgtgcattag aagagttaaa agaaaatggt
     1021 aaaattaaag caatcggtgt atctaacttc ggcgttgatc gaattgtaga tttaggtatt
     1081 cacaatcaaa ttcaaccaca agtgaaccaa atagaaatta atccattcca tcaacaagaa
     1141 gaacaagttg cagcacttca acaagaaaat gttgtggtag aagcttgggc accatttgca
     1201 gaaggtaaaa atcaattatt ccaaaatcaa ttgttgcagg ccattgcaga taaatataac
     1261 aaatcaattg cacaagttat tttacgctgg ttagtagaac gtgacatcgt tgtactcgca
     1321 aaatcagtga atccagaacg tatggctcaa aacttagata tatttgattt tgaacttaca
     1381 gaagaagata aacaacaaat tgcgacatta gaagaaagta atagccaatt tttctcacat
     1441 gctgatccag agatgattaa agcacttaca agcagagaat tagatgttta atcataatat
     1501 aacaaagtaa ataatttaca ttacactaac ctgaaacttg gatgttaaag tctatgtttc
     1561 aggttatttt ttactcttaa aaagtgaaag gagcaagcaa ataagttatt atatattttt
     1621 atattatgca ataacttacc taaggttata attagataat taatatgtct tggaattaat
     1681 tatctaataa gttgtatagc aggtggcgat atgacatata tacccttttc tattattaca
     1741 ttaattacag gtatcattat gcatatgaca atgtactttg taaaatttga atgttggaaa
     1801 atgccattat tcatgaagat tatttttaca atctaaaagc agtaaagact cataatatag
     1861 ccaaaaacgt taataaaagt ttgttaaatg ataagggggt gagtattggt aaatttattc
     1921 aaaaggttaa agggaaaaat cctacctaga gagatccaaa aactaaatgg actatttcca
     1981 aaaataaagg gcaaccacat ggtgattctt attggaagtt aataaataac aaaggaaaca
     2041 gaatagattc tttaactaaa gaaggaaaaa atcttaaggg aataaggtgt tgtaaattat
     2101 gtgctttgat ataaataatt tgaatataaa aaagttgaat tttagaaagg taaaaaacgc
     2161 aattcattta agtttaagtg gcgataaata ccagtttttg gaggacggta aaactatcaa
     2221 taatacttat tttttagctg tatatgataa tgcaataaac atttttgaag atttgttttc
     2281 gccttctgat tctataaatt tggttcatgt agtatatgtt tataatgaac cttataagaa
     2341 aacaaatgtt ataagaaaat ttacatcgtt aacaatagat gaattgtatt actttaaaga
     2401 atataaaaag gagaaggatg ataatatttt gtgcgaggag ttttcatata agtgttccat
     2461 aaaagatata aaatataaaa aattattaaa agctatatcc aataaagact ttaaagggtt
     2521 agttccaaat atcaatcaga atgataatta ttctgaaata tacataatta acaatactaa
     2581 aaacgtaata tatcatttat atgatgatag aggtctatgg ctagctttta ataataatga
     2641 agattatgca agatattctg aaaaatataa tgatttaata tcagaatttg ataacgaaga
     2701 tatctaattt tttaatattc gcagctatt
//
LOCUS       DAKPJH010000185         2709 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.188, whole genome shotgun sequence.
ACCESSION   DAKPJH010000185 DAKPJH010000000
VERSION     DAKPJH010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.188"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            62..2254
                     /locus_tag="OY092_002626"
     CDS             62..2254
                     /locus_tag="OY092_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077523.1"
                     /translation="MAKSCLHILTNNEYATTRCQDGIVLFWPIDGEIELQKFRKSKII
                     EDDIYIINHLDVFSIKNNKKTIMLYLSSDWFAELGFTFFNYHYTAKLIKSSYNLKCLL
                     LKLTYRYLDNQPLNDADIRKLQDIIKIIAKEASMDKKIAQNQYRYAYYGDLRDELEYI
                     YQNVNQRLTLKSVADKLFVSKSNLSSQFHLLMGMGFKKYIDTLKIGKSIEILLTTDST
                     ISNISEHLGFSSSSTYSKMFKSYMDITPNEYRNLSKFNKCIMLNPEPLVGGMAQEVKE
                     VILNYIDHYKNHLTDVIHIDEDKFEIPKLFQTVVQINTYTEMKLVFLEGIFKTLLNKN
                     SQVVFFIMPSILKSKNTMSEEEKFTIIKTIIESDLKIAFNINDIETTYYVEEAFINDI
                     ETTYYVEEAFMNVIRQLSPNEINHHNNYEVHFVFDLSLMEIRTIYRMILKLHNIMLNV
                     KLGLNITCLFDKPSVFKSLVSQIKRLKFNSLIIDNANLSSPYLMGESDELLLKNILHF
                     KNLKKVINELDIEQEKLIFLNVENHKLLNNKERDLSNSAPLIYKTLSALYHNFDGFGL
                     NIFDNHQTFNAMHLYDKNGFKTTLGLILEKFIEYVSKPKYENSYYSIFDIENYHCLVI
                     YDWRVIESETIMSNFEDSQVYINFKNNVLNDKYLIVIETLDENSGNINHLISKELRDK
                     YEWNPSLLSKIDNYLKPAIEIKEHNFSNNSLNINVTFNALYIIKIGKK"
     gene            2400..>2709
                     /gene="sarX"
                     /locus_tag="OY092_002627"
     CDS             2400..>2709
                     /gene="sarX"
                     /locus_tag="OY092_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001090984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarX"
                     /protein_id="HCX1077524.1"
                     /translation="MNTEKLETLLGFYKQYKALSEYIDKKYKLSLNDLAVLDLTMKYC
                     KDEKVLMQSFLKTAMDELDLSRTKLLVSIRRLIEKERLSKVRSSKDERKIYIYLNDDD
                     I"
BASE COUNT         1077 a          307 c          418 g          907 t
ORIGIN      
        1 ataagttaaa tattataggg aatgataaaa gtggtattta aatatagaaa gaggtaaagt
       61 tatggcaaaa tcatgcttgc atatacttac taataatgaa tatgcgacaa cgcgttgcca
      121 agatggcata gtcttatttt ggccaattga cggggaaatc gaactacaaa aatttcgtaa
      181 aagtaaaata attgaagatg atatatatat cattaatcat ctggatgtat ttagtattaa
      241 gaataataaa aaaacgatca tgttgtattt gagtagcgat tggtttgcgg aattaggctt
      301 tactttcttt aattatcact atacagcaaa gttaattaaa tcatcctata atttgaaatg
      361 cttattatta aaattgacat atcgatacct tgataatcag cctcttaatg acgctgatat
      421 tagaaaatta caggatatta ttaaaatcat tgcaaaagaa gcaagtatgg ataaaaagat
      481 tgcgcaaaat caatatcgtt atgcttatta tggtgatttg cgagatgagc tcgaatatat
      541 ttatcaaaat gtaaatcaac gattgacatt aaaaagtgtc gctgataaat tatttgtttc
      601 aaagtcaaat ctgtcttcgc aattccactt acttatgggc atgggtttta aaaaatatat
      661 tgatactttg aaaattggta aatccataga gattctactt actacagata gtactattag
      721 caatataagt gaacatttag gatttagcag cagctcaacg tactctaaaa tgtttaaaag
      781 ttatatggat ataacaccga atgaatatcg taatttatca aaatttaata aatgtataat
      841 gcttaatcca gagccacttg taggcggtat ggcccaagaa gtaaaagaag tcatattgaa
      901 ttatattgat cattataaaa atcacctaac tgatgttata catattgacg aagacaaatt
      961 tgaaatacct aagttatttc aaacggttgt tcaaattaat acttatacag aaatgaaact
     1021 tgttttctta gaaggaattt ttaaaacctt attgaacaag aacagccaag ttgtcttttt
     1081 catcatgcca tcgattttaa aaagtaaaaa taccatgtcc gaagaagaaa agtttacaat
     1141 cattaaaacc ataattgaaa gtgatttaaa gatagcattt aatataaatg atattgaaac
     1201 gacttattat gttgaagaag cttttataaa tgatattgaa acgacttatt atgttgaaga
     1261 agcttttatg aatgttatta gacaattatc tccaaacgaa ataaatcatc ataataatta
     1321 cgaagtgcat tttgtttttg atttatcatt gatggaaatt aggacaattt accgtatgat
     1381 tttaaaacta cataacatca tgttaaatgt gaaattagga ttgaatatta cctgtttatt
     1441 tgataaacct tcagttttta aatcactagt atcacaaata aagcgactta aattcaattc
     1501 gttaataata gataatgcaa atttaagtag cccttatttg atgggggaaa gtgatgagtt
     1561 actattgaaa aatattttgc attttaaaaa tttaaaaaaa gttattaacg aattggatat
     1621 agaacaagaa aagctgattt ttctaaatgt tgaaaatcat aaactgctta ataataaaga
     1681 acgagattta agtaatagtg ctccattaat ttataagaca ttaagtgcgc tgtatcataa
     1741 ctttgatggt tttggattaa acatttttga taatcatcaa acatttaatg cgatgcatct
     1801 atatgataaa aatggattta aaacaacact aggtcttata ttagaaaagt ttatcgaata
     1861 tgtctcgaaa ccaaaatacg aaaacagtta ttattctatt tttgatatag agaattatca
     1921 ttgcctggtt atttatgatt ggcgagtgat tgagagcgag acaattatga gcaattttga
     1981 ggatagtcaa gtttatataa atttcaaaaa taatgtttta aacgataaat atctaattgt
     2041 aatagaaacg ttagatgaaa atagtgggaa cattaatcat ttgatttcta aagaattaag
     2101 agataaatat gaatggaacc ccagtttact ctctaaaatt gacaactacc ttaaaccagc
     2161 aatcgagatt aaagagcata actttagtaa taattcctta aacattaacg ttacttttaa
     2221 tgcgttatac ataattaaaa taggaaaaaa ataacacctt gatatgtatt gcaaaattta
     2281 atttgcattt gttggtaatt ttgacaacgt attaaaaaca aatgagaaag acaatggcag
     2341 aaaaatttaa gataataatg acagaagcat tgtctttata tatttggggg tgcaacattt
     2401 tgaatactga gaaattagaa acattgcttg gcttctataa acaatataaa gcattatctg
     2461 aatatattga taaaaaatat aagttgtcgc taaatgattt agcagtctta gatttaacga
     2521 tgaagtattg caaagatgaa aaagtactta tgcaatcatt tttaaaaact gcaatggatg
     2581 agctagattt aagtaggaca aaattattag tttctataag aagactaatt gaaaaagaaa
     2641 gacttagtaa agttagatca tctaaagatg agcgtaaaat ttatatttat ttaaatgatg
     2701 atgatatat
//
LOCUS       DAKPJH010000186         2685 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.189, whole genome shotgun sequence.
ACCESSION   DAKPJH010000186 DAKPJH010000000
VERSION     DAKPJH010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.189"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            64..855
                     /locus_tag="OY092_002628"
     CDS             64..855
                     /locus_tag="OY092_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HCX1077525.1"
                     /translation="MALKHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETL
                     SEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYID
                     EINMAKPETLPVLNGVLDYRRQITNPYTGEVIKAVPGFNVIAAINEGYVGTLPMNEAL
                     KNRFVVIHVDYIDGDILKNVIKEQSLLQDDKQIEQIIKFNEDLRTMSKQGQISEEAAS
                     IRALLDLCDLITVMPVERAIKRTIIDKLEDEREQQAIYNAVELNF"
     gene            869..>2685
                     /locus_tag="OY092_002629"
     CDS             869..>2685
                     /locus_tag="OY092_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase activation protein NorD"
                     /protein_id="HCX1077526.1"
                     /translation="MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTQVKIQKFPYY
                     NPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKF
                     YQQLFKLLEDMRVLNSIKVERPSTAKLIDLRLDTRVSYTESQIKVYRTKTQYTDLLFL
                     YLEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDI
                     LKEDMLNEYYYLPKTLYNTLASPEFDDLKRTDASQVYGQDDTSEDDDNESEKADSKSA
                     DSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKKGKGSNDTLNREEGD
                     AVGQSQAFQLDGVNKNVEIKWQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIER
                     EQRDARFNLTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKM
                     AETKKGVVLFHETLKALNIKHEILSFSEDAFDSDEHAQPNIINEIINYDYSTFEKDGP
                     RIMALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGIIDTYEA
                     VEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFV"
BASE COUNT         1009 a          365 c          489 g          822 t
ORIGIN      
        1 ggcatttgga gaacttattc catgtcttag ttttttaatt tatttaaagg agaacgtttt
       61 aaaatggcac taaaacatta taagaattca gattcaacag ttttcaatga tgcgaaggca
      121 ttatttgatt taaataaaaa tattttactt aaaggtccaa cgggttcagg gaaaacgaag
      181 ttggcagaaa cattaagtga agttgttgat acacccatgc atcaagtcaa ctgttctgtt
      241 gatttagata cagaaagctt attaggcttt aaaacaatta aaacaaatgc ggaaggacaa
      301 caagaaattg tctttgtaga tggtccagtt attaaagcta tgaaagaggg gcatatttta
      361 tatattgatg aaataaatat ggctaaacct gaaacattgc ctgtattaaa tggggtctta
      421 gattatcgtc gtcaaattac gaatccatac actggtgaag taatcaaagc tgtaccagga
      481 tttaacgtta tagcagcgat aaatgaaggt tatgttggta cattgccaat gaatgaagca
      541 ctaaaaaatc gctttgttgt tattcacgtt gactatattg atggggacat tttaaaaaat
      601 gtgattaaag agcaaagttt attacaagat gataaacaaa tcgaacaaat tattaagttt
      661 aacgaagatt tacgtactat gtctaagcag ggacaaattt ctgaagaagc cgctagtatc
      721 cgtgcattat tagacttgtg tgatttaatc actgtaatgc cagttgaacg tgcaattaaa
      781 cgtacaataa ttgataaatt ggaagatgaa cgtgaacaac aagcaatata taatgctgta
      841 gaactaaact tttaaagagg gataaaacat gagtgatcgt ttcataaaat ttaacgacga
      901 acagttagat gcaaagcaag taatgatgtt gcaagactta gctcgactct tattaaaaaa
      961 tgaacaaaca caagttaaaa tccaaaaatt cccttactat aatcctgttc aaaatgtttt
     1021 gattacgagt tggttttggt cacatcgacc aagccatatc gaaatggctg gtttaaaaac
     1081 agatgttatg ttagctgctt acggttatca tatgatggat gtacaaattg taaatgaagt
     1141 agtacaagat aaaactttta aacaccctaa attttatcaa caacttttta aattgttaga
     1201 agatatgcgt gtattaaatt ctattaaagt tgagcgccca agtactgcta aattaattga
     1261 tcttcgctta gatacacggg tatcatatac ggaatctcaa attaaagtgt atcgtactaa
     1321 aacacaatat acagatttat tatttttgta tttagaacat gcatttttaa gtcaagattt
     1381 ctttgatata ccatctatac attcagattt agatgatatt ttagtaaata tgttcttata
     1441 tttacctaat tttttccaaa atcaaaattc tgaagataat atgtatctgg ctcaaagaat
     1501 tatgtatcaa gtagatgata ttttaaaaga agatatgcta aacgaatatt attacttacc
     1561 taaaacacta tataatacat tagctagtcc agagtttgat gatttaaaga gaactgatgc
     1621 aagtcaagtc tatgggcaag atgatacttc agaagatgat gataacgaaa gtgaaaaagc
     1681 tgactctaaa tctgcagata gtgagtcaaa aggtggcgcc tatttagaaa tggagcttca
     1741 cgaaggacaa aatagtgaaa cattaggtaa tgatgaagca cgtgaaggcg atgctacaga
     1801 tgatatgact gatatgatga ccaaaaaggg caaaggatca aacgatacgc taaatcgtga
     1861 agaaggcgat gctgttggtc aaagccaagc atttcaactt gatggtgtga acaaaaatgt
     1921 agaaataaaa tggcaaattc ctgaaattga gccacaatat gttttagaat atcaagaatc
     1981 gaaacaagac gtacaatatg aaatcaaaga cttaattcaa attataaaga aaacgattga
     2041 acgagaacaa cgagatgcac gttttaattt aacaaaaggg cgattacaaa aggatttaat
     2101 taattggttt atcgacgatc aatataaatt gttttacaaa aaacaagatt taagtaaatc
     2161 atttgatgcg acatttacat tgttaattga tgcgtcagca agtatgcatg ataaaatggc
     2221 tgaaacgaag aaaggtgtag tgttattcca cgagacgtta aaagcattga acattaaaca
     2281 tgaaatttta tcattcagtg aggatgcctt tgattcagac gagcatgcac aaccaaatat
     2341 cattaatgaa attattaact atgattactc aacctttgaa aaagatggcc cacgtattat
     2401 ggcacttgaa cctcaagatg ataatcgtga tggtgttgct attagagttg caagtgaacg
     2461 attaatgcgt cgaaatcaac atcaacgatt tttaatcgta ttttcagacg gcgaaccgtc
     2521 tgcatttaat tatagtcaag atggtattat tgatacgtat gaagctgtag aaatgtcacg
     2581 taaatttggt attgaagtat ttaatgtatt tttgagtcaa gatccaataa ctgaagatgt
     2641 tgaacaaaca attcataata tttatggtca atatgctatt ttcgt
//
LOCUS       DAKPJH010000187         2633 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.190, whole genome shotgun sequence.
ACCESSION   DAKPJH010000187 DAKPJH010000000
VERSION     DAKPJH010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.190"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(63..146)
                     /locus_tag="OY092_002630"
     tRNA            complement(63..146)
                     /locus_tag="OY092_002630"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(110..112),aa:Leu,seq:caa)
     gene            complement(185..259)
                     /locus_tag="OY092_002631"
     tRNA            complement(185..259)
                     /locus_tag="OY092_002631"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(224..226),aa:Gly,seq:tcc)
     gene            complement(363..437)
                     /locus_tag="OY092_002632"
     tRNA            complement(363..437)
                     /locus_tag="OY092_002632"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(402..404),aa:Gly,seq:tcc)
     gene            complement(445..518)
                     /locus_tag="OY092_002633"
     tRNA            complement(445..518)
                     /locus_tag="OY092_002633"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(484..486),aa:Cys,seq:gca)
     gene            complement(524..595)
                     /locus_tag="OY092_002634"
     tRNA            complement(524..595)
                     /locus_tag="OY092_002634"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(561..563),aa:Gln,seq:ttg)
     gene            complement(607..679)
                     /locus_tag="OY092_002635"
     tRNA            complement(607..679)
                     /locus_tag="OY092_002635"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(644..646),aa:His,seq:gtg)
     gene            complement(682..755)
                     /locus_tag="OY092_002636"
     tRNA            complement(682..755)
                     /locus_tag="OY092_002636"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(721..723),aa:Trp,seq:cca)
     gene            complement(771..851)
                     /locus_tag="OY092_002637"
     tRNA            complement(771..851)
                     /locus_tag="OY092_002637"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(815..817),aa:Tyr,seq:gta)
     gene            complement(857..932)
                     /locus_tag="OY092_002638"
     tRNA            complement(857..932)
                     /locus_tag="OY092_002638"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(897..899),aa:Thr,seq:tgt)
     gene            complement(940..1012)
                     /locus_tag="OY092_002639"
     tRNA            complement(940..1012)
                     /locus_tag="OY092_002639"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(977..979),aa:Phe,seq:gaa)
     gene            complement(1031..1106)
                     /locus_tag="OY092_002640"
     tRNA            complement(1031..1106)
                     /locus_tag="OY092_002640"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1071..1073),aa:Asp,seq:gtc)
     gene            complement(1116..1189)
                     /locus_tag="OY092_002641"
     tRNA            complement(1116..1189)
                     /locus_tag="OY092_002641"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1153..1155),aa:Met,seq:cat)
     gene            complement(1204..1296)
                     /locus_tag="OY092_002642"
     tRNA            complement(1204..1296)
                     /locus_tag="OY092_002642"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1258..1260),aa:Ser,seq:tga)
     gene            complement(1335..1410)
                     /locus_tag="OY092_002643"
     tRNA            complement(1335..1410)
                     /locus_tag="OY092_002643"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1375..1377),aa:Asp,seq:gtc)
     gene            complement(1421..1510)
                     /locus_tag="OY092_002644"
     tRNA            complement(1421..1510)
                     /locus_tag="OY092_002644"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1472..1474),aa:Ser,seq:tga)
     gene            complement(1520..1593)
                     /locus_tag="OY092_002645"
     tRNA            complement(1520..1593)
                     /locus_tag="OY092_002645"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1557..1559),aa:Ile,seq:cat)
     gene            complement(1622..1695)
                     /locus_tag="OY092_002646"
     tRNA            complement(1622..1695)
                     /locus_tag="OY092_002646"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1659..1661),aa:Met,seq:cat)
     gene            complement(1717..1792)
                     /locus_tag="OY092_002647"
     tRNA            complement(1717..1792)
                     /locus_tag="OY092_002647"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1757..1759),aa:Ala,seq:tgc)
     gene            complement(1810..1883)
                     /locus_tag="OY092_002648"
     tRNA            complement(1810..1883)
                     /locus_tag="OY092_002648"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1847..1849),aa:Pro,seq:tgg)
     gene            complement(1893..1966)
                     /locus_tag="OY092_002649"
     tRNA            complement(1893..1966)
                     /locus_tag="OY092_002649"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1930..1932),aa:Arg,seq:acg)
     gene            complement(1985..2073)
                     /locus_tag="OY092_002650"
     tRNA            complement(1985..2073)
                     /locus_tag="OY092_002650"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2037..2039),aa:Leu,seq:taa)
     gene            complement(2084..2158)
                     /locus_tag="OY092_002651"
     tRNA            complement(2084..2158)
                     /locus_tag="OY092_002651"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2124..2126),aa:Gly,seq:gcc)
     gene            complement(2162..2243)
                     /locus_tag="OY092_002652"
     tRNA            complement(2162..2243)
                     /locus_tag="OY092_002652"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2207..2209),aa:Leu,seq:tag)
     gene            complement(2247..2322)
                     /locus_tag="OY092_002653"
     tRNA            complement(2247..2322)
                     /locus_tag="OY092_002653"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2287..2289),aa:Lys,seq:ttt)
     gene            complement(2328..2403)
                     /locus_tag="OY092_002654"
     tRNA            complement(2328..2403)
                     /locus_tag="OY092_002654"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2368..2370),aa:Thr,seq:tgt)
     gene            complement(2420..2495)
                     /locus_tag="OY092_002655"
     tRNA            complement(2420..2495)
                     /locus_tag="OY092_002655"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2460..2462),aa:Val,seq:tac)
     gene            complement(2507..2621)
                     /gene="rrf"
                     /locus_tag="OY092_002656"
     rRNA            complement(2507..2621)
                     /gene="rrf"
                     /locus_tag="OY092_002656"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          727 a          679 c          624 g          603 t
ORIGIN      
        1 aaaaagaaac cttgttttac aaggtttcta atacgttatg ttatgtaaat aacagttaat
       61 tataccggtg gtcggggtcg aaccgacact ccacaagtgg aacgggattt tgagtcccgc
      121 gcgtctgcca attccgccac accggcttaa tggtaaacaa aaaacttccc tttggaagca
      181 attatggagc ggaagatagg atttacacct atacctcgtt ccgggaagga acgtgttcta
      241 aaagttgaac tactcccgca aatattaaat tatggagcgg aagataggat ttacacctat
      301 acctcattcc aggaaggaat gtattctaag agttgaaata ctcccgcatt attattaaat
      361 tatggagcgg aagataggat ttgcacctat acctcgttcc gggaaggaac gtgttctaaa
      421 agttgaacta ctcccgcata aacctggagg cggcaaccgg atttgaaccg gtgataaagg
      481 ttttgcagac ctctgcctta ccacttggct atgccgccaa taactgggct agctggattc
      541 gaaccaacga gtgacggagt caaagtccgt tgccttaccg cttggctata gcccattaat
      601 aataagggcg gctgaagggg atcgaaccct cgaatgtcgg aaccacaatc cgatgtgtta
      661 accacttcac cacagccgcc atggcagggg cagtaggaat cgaacccaca ccaaaggttt
      721 tggagacctc tattctaccg ttgaactatg cccctattaa aaataataaa tggagggggg
      781 cagattcgaa ctgccgaacc cgaaggagcg gatttacagt ccgccgcgtt tagccacttc
      841 gctacccctc cataaatggt gccggccaga ggacttgaac ccccaaccta ctgattacaa
      901 gtcagttgct ctaccaattg agctaggccg gctaagaaat ggttcaggac agagtcgaac
      961 tgccgacaca tggagcttca atccattgct ctaccaactg agctactgaa ccataataaa
     1021 aatgtaatga tggcggtctc gacgggaatc gaacccgcga tctcctgcgt gacaggcagg
     1081 cgtgttaacc gctacactac gagacctata aaatattgcg ggaggcggat ttgaaccacc
     1141 gaccttcggg ttatgagccc gacgagctac cgaactgctc catcccgcga taataaaaaa
     1201 taatggcgga ggaagaggga ttcgaacccc cgcggcccgt taaggccctg tcggttttca
     1261 agaccgatcc cttcagccgg acttgggtat tcctccatta ttataggtaa atcgctatta
     1321 attataaaat taaatggcgg tctcgacggg aatcgaaccc gcgatctcct gcgtgacagg
     1381 caggcgtgtt aaccgctaca ctacgagacc attagtaaaa cggaggaaga gggattcgaa
     1441 cccccgcgag ccgttaagcc cctgtcggtt ttcaagaccg atcccttcag ccggacttgg
     1501 gtattcctcc aaaattatat ggaccttgca ggactcgaac ctgcgaccga acggttatga
     1561 gccgttagct ctaaccaact gagctaaagg tcctaaatat aattttacaa ctaataaata
     1621 gtggcggtgg aggggatcga acccccgacc tcacgggtat gaaccgtacg ctctagccag
     1681 ctgagctaca ccgccttata tagtttgtaa ataatatggt ggagactagc gggatcgaac
     1741 cgctgacctc ctgcgtgcaa agcaggcgct ctcccagctg agctaagccc ccataataat
     1801 tacagtatat cgggaagaca ggattcgaac ctgcgacccc ttggtcccaa accaagtgct
     1861 ctaccaagct gagctacttc ccgtataatt aacgcgcccg ataggagtcg aacccataac
     1921 ctcttgatcc gtagtcaaac gctctatcca attgagctac gggcgcatat gtttttattg
     1981 aaaatggtgc cgaggaccgg aatcgaaccg gtacggtgat cactcaccgc aggattttaa
     2041 gtcctgtgcg tctgccagtt ccgccacccc ggcactataa aaatggagca gaagacggga
     2101 ttcgaacccg cgaccccaac cttggcaagg ttgtattcta ccgctgaact acttctgcat
     2161 atgcgggtga agggagtcga acccccacgc cgtaaggcgc tagatcctaa gtctagtgcg
     2221 tctgccaatt ccgccacacc cgcaaatggt gagccataga ggattcgaac ctctgaccct
     2281 ctgattaaaa gtcagatgct ctaccaactg agctaatggc tcttccatgg tgccggccag
     2341 aggacttgaa cccccaacct actgattaca agtcagttgc tctaccaatt gagctaggcc
     2401 ggcaatatgt aagaataaat ggtggagaat gacgggttcg aaccgccgac cctctgcttg
     2461 taaggcagat gctctcccag ctgagctaat tctccgattt aaaactgcct ggcaacgttc
     2521 tactctagcg gaacgtaagt tcgactacca tcgacgctaa ggagcttaac ttctgtgttc
     2581 ggcatgggaa caggtgtgac ctccttgcta tagtcaccag acatatgaat gta
//
LOCUS       DAKPJH010000188         2583 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.191, whole genome shotgun sequence.
ACCESSION   DAKPJH010000188 DAKPJH010000000
VERSION     DAKPJH010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.191"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            46..336
                     /locus_tag="OY092_002657"
     CDS             46..336
                     /locus_tag="OY092_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000514001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077527.1"
                     /translation="MGKEIYLDPIEFQNVLEKFEKGSSEISEVSISSIKDAKNEIILE
                     SIVELEKIIDDLSKAMKTYSKMIGSDKEAMDKIASTMQRNDKDNANKIANRN"
     gene            349..1611
                     /locus_tag="OY092_002658"
     CDS             349..1611
                     /locus_tag="OY092_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077528.1"
                     /translation="MPRLVNSELEEYFNKTNDVKTKLNEVLYNHYTQCYFLSKTGSIK
                     GKTADSIKKYVESAHISTISRAINLMDKLEASVKHLKELGEKCDKSSNAKIGLQTLNE
                     TKKGVVSKKKEFIDLTSNSPAILSEASEFIDTVSLGKDNVESDYNESSKKIDRTKEKL
                     KTMDQTGKQSLESLSNDVRGLITQINKLNNEYHDKNGIIVSKINSITKENWYKNETNK
                     GEFKKMKADHPVAYAEGDETIGRTQAISKDGHIVGTAEIGKVSGIAYRSDDSMGVKGD
                     AKVAGLDGKVKYENVEGKAGLEVGSVKGSAEISNSHISAIAEAQLIDAEAQLRFGSED
                     NNLHVKGDAKVLSASASGSLGADGVEAKAEAVGANTGVEGGFALSGLNFDFGASIGAQ
                     AGGGVNVGKKGIEVDAKFILGGKIKITW"
     gene            1624..2037
                     /locus_tag="OY092_002659"
     CDS             1624..2037
                     /locus_tag="OY092_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000047129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5082 family protein"
                     /protein_id="HCX1077529.1"
                     /translation="MSKSSLILEKNYKLQQSAETKTKIAELNDKIERATRIKNKLNDL
                     KKEVKEHRTNSKNIFKEYSYWKGENNSKWEEKSESELISGSITNCIKNIDDNIDRLID
                     KITEMQNEVNSLGSTLSVLENAINSIAAAIEKLTN"
     gene            2048..2521
                     /locus_tag="OY092_002660"
     CDS             2048..2521
                     /locus_tag="OY092_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000411307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5083 family protein"
                     /protein_id="HCX1077530.1"
                     /translation="MEKIKRINKIFLSFEVIPFAMMILLAFLPVIAGIINNRLQYGRD
                     FGDRVSFYCYISIMVAYAITILLEIIFYFILLKNYQYDQNNIELANRVKVTKVLSILY
                     MIPGLYAIACYFRFIHVRSFRENKKSGQPAYHFWEFFIKPNRKPIELKDFFIKNR"
BASE COUNT         1064 a          258 c          516 g          745 t
ORIGIN      
        1 ttctagtttt gttaatttta aaattaactt tgaggaggtt taagtatggg gaaagaaatt
       61 tatttagatc caattgaatt tcaaaatgta ttagagaaat ttgaaaaagg atcaagtgag
      121 attagtgaag tttcaatttc tagtataaaa gatgctaaaa atgaaattat attagaaagt
      181 atagttgaac tagaaaaaat aattgacgac ttatcgaaag cgatgaaaac gtattctaag
      241 atgattggca gcgataaaga agcaatggat aaaatagcat caacaatgca acggaatgat
      301 aaagataatg caaataaaat tgcaaatagg aattagggag gggaaaatat gcctagatta
      361 gttaattcag agttagaaga atattttaat aaaacaaatg atgtgaaaac gaaattaaat
      421 gaagtattat ataatcatta cactcaatgt tattttttat ctaaaactgg tagtataaaa
      481 ggaaaaacag cggatagtat aaagaaatat gttgaatcag cacatataag cacaatttct
      541 agagctatta atttaatgga taagttggaa gcatcagtaa agcacttaaa agaacttgga
      601 gaaaaatgcg ataaaagtag taatgccaaa attggtttac aaactttgaa tgaaactaaa
      661 aaaggtgtgg tctcaaaaaa gaaggaattc atagatctta caagtaattc cccagcaatt
      721 ctatctgaag catcagaatt tattgatact gtgtctttag ggaaagataa tgtagaaagt
      781 gattacaatg aaagttccaa aaaaatagat agaactaaag aaaaacttaa gactatggat
      841 caaacaggta agcaatcact agaaagtcta agcaatgatg taagaggatt aataactcaa
      901 ataaataaat tgaataatga atatcatgat aaaaatggaa ttatcgtatc aaagataaac
      961 tccattacaa aagaaaattg gtataaaaat gaaactaaca agggtgaatt taaaaaaatg
     1021 aaagcggatc atcctgttgc ttatgcagaa ggagatgaga caataggtag aactcaagca
     1081 atttctaaag atggacatat agttggtaca gctgaaatag gtaaagttag tggaatagca
     1141 tatcgaagcg acgattcgat gggggttaaa ggagatgcta aagtagctgg attagatggt
     1201 aaggtaaagt acgagaatgt tgaaggtaag gcaggactcg aagtagggag tgtaaaaggt
     1261 tcagctgaaa ttagtaactc gcatatatct gctattgcag aagcgcaatt aattgatgcg
     1321 gaagcacaat taagatttgg atcagaagat aataatttgc atgtaaaagg agatgcaaaa
     1381 gttttgtcag caagtgcgag tggatcttta ggtgctgatg gagtagaagc gaaagctgaa
     1441 gcagtcggag ctaatacagg ggttgaaggt ggttttgcac ttagtggatt aaattttgat
     1501 tttggcgcga gtattggggc tcaagctggg ggaggtgtaa atgttggcaa aaaaggaatt
     1561 gaagttgatg ctaaatttat acttggagga aaaattaaaa ttacatggta aaggaagaat
     1621 aaaatgtcga aatcatcttt aatattggaa aagaattata aacttcaaca gtcagcagaa
     1681 actaaaacca aaatagcaga attaaatgat aaaatagaaa gagcaacacg aattaagaat
     1741 aaattaaatg atttaaaaaa ggaagtgaaa gagcatagaa caaattcaaa gaatattttc
     1801 aaagaatatt cctattggaa gggagaaaat aattcgaaat gggaagagaa aagtgagagt
     1861 gaactcataa gtggttcaat aacaaattgt ataaaaaata ttgatgataa tatcgataga
     1921 ctcatcgata aaattaccga gatgcaaaat gaagttaatt cattgggtag tacattatct
     1981 gtactagaaa atgcaataaa ttcaatagct gctgctattg aaaaattaac taattaaagg
     2041 agtagaaatg gaaaaaataa agagaataaa caaaatattt ttatcatttg aagttattcc
     2101 atttgcaatg atgattttac tggcgtttct accagttatt gcaggtataa ttaataatcg
     2161 tttgcagtat ggtagggatt ttggcgatag agtaagcttt tattgttata tttcaattat
     2221 ggttgcatat gcaattacca ttttgttaga aattattttt tactttattt tattgaaaaa
     2281 ctatcaatat gatcaaaata atattgaatt ggctaataga gtgaaagtta caaaagtact
     2341 gtcgattttg tatatgattc ccggattata tgcgattgca tgctatttta gatttataca
     2401 tgttcgctca tttagagaaa ataaaaaatc tggacagcct gcttaccact tttgggaatt
     2461 ttttataaaa cctaatcgaa aaccgataga gttgaaagac ttttttatta aaaatagata
     2521 attaaggagt aaccaatgaa aagattaatt ataggagtgt taattataat gatgagtata
     2581 atc
//
LOCUS       DAKPJH010000189         2502 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.192, whole genome shotgun sequence.
ACCESSION   DAKPJH010000189 DAKPJH010000000
VERSION     DAKPJH010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.192"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            219..782
                     /locus_tag="OY092_002661"
     CDS             219..782
                     /locus_tag="OY092_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HCX1077531.1"
                     /translation="MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRI
                     KKIKEMNYSKVLVITEDWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTN
                     GKSRAIPIFVFLNDQFEQETVWGPRANEVQKFVTDVRSDKLPSKDHPDYADLEKETHL
                     VISNRYKTDASFWKAVYNSILNKLENK"
     gene            complement(848..1588)
                     /gene="pmtD"
                     /locus_tag="OY092_002662"
     CDS             complement(848..1588)
                     /gene="pmtD"
                     /locus_tag="OY092_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtD"
                     /protein_id="HCX1077532.1"
                     /translation="MRILNLVKYDFYSIFKSPLTYLAILVVSSLIATQSILMANSMDN
                     PKHIIVYGSVFAAAKWLLLIIGLMFVVKTITRDFSQGTIQLYMSKVKTRVGYIISKTI
                     SIILISILFAVIHYVILIVVQASSNGKNLAFSKYVDNLWFFLIFLLFFGLFLFLITLA
                     SQKTAMIFSLGVFLVLIVPFIKPFITFIPRYGEKVLDAFDYIPFAYLTDKMISSNFDF
                     SNWQWVISLGSIVIFFILNILYVAKKDI"
     gene            complement(1588..2460)
                     /gene="pmtC"
                     /locus_tag="OY092_002663"
     CDS             complement(1588..2460)
                     /gene="pmtC"
                     /locus_tag="OY092_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtC"
                     /protein_id="HCX1077533.1"
                     /translation="MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTVMK
                     VMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGFDKAYTDK
                     IIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT
                     TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEEGVASDTTIVTVD
                     HKDFDRTEKYLAEHFQLQNVDKADGHLMINAQKNYQVILKALSELDIYPKYIETRKSS
                     LRDTYFNINQRGDK"
BASE COUNT          925 a          411 c          314 g          852 t
ORIGIN      
        1 acaccaaaag aacagattaa aaataatata aacacaaccc agcgattttg aatacgcact
       61 gatgtcaccc tttctttgta cttatttaaa tatagcataa ggtgcttccc gtttcatcct
      121 taacaaaaat taacaaagaa tttgcaatta atttatttca ttacctttta ttactataaa
      181 ttggtataat gttgtaaatg ctaaaggagg tttttacaat gacaaattta gaaacttatt
      241 tcaaaaatag ccaaccctta aatgaataca ttgatggaat gaagacaaat caagataccg
      301 ttctcagtat ctatcaatca tttgagttac cagaagatga ttcacgcatc aaaaaaataa
      361 aagagatgaa ttattctaaa gtattagtaa ttactgaaga ctggtgtgga gatgcaatga
      421 tgaatctccc aattctaaaa cacatcagtg aagcattaaa tttagaagta cgcgtgttcc
      481 atagagatga tgatacaaaa ctgatcgatc aatatttaac aaatggtaaa tcacgtgcaa
      541 ttcctatctt cgtattcttg aatgatcaat tcgaacaaga aacagtttgg ggaccaagag
      601 caaatgaagt ccaaaaattt gtaactgatg ttcgttctga taaattaccg agcaaagatc
      661 atccagacta tgcagattta gaaaaagaaa cacacttagt tatatcaaac cgctataaaa
      721 ctgacgcttc attttggaaa gcagtttata attccatcct aaataaatta gaaaataaat
      781 aaatttacaa taagacaaac tttgaggttg ggaaaattta aaattcccaa cctcaaaatt
      841 atttttatta aatgtctttt ttagcgacat ataagatatt caaaatgaag aatatcacta
      901 tagaacctaa tgaaattacc cattgccaat tgctaaaatc aaagttagag ctaatcattt
      961 tatcagttaa gtaagcaaaa gggatataat caaaagcatc taaaactttt tcaccgtatc
     1021 ttgggataaa tgtaataaaa ggtttaataa acggtacaat gagtactaaa aatacaccta
     1081 atgaaaatat cattgctgtt ttttgtgatg caagtgtgat taagaataaa aacaagccaa
     1141 agaatagtaa aaagattagg aagaaccata aattatctac atatttagaa aacgccaaat
     1201 tttttccatt actagatgcc tgcacaacaa tcaaaatcac ataatgaatt actgcaaata
     1261 atattgaaat taaaataatt gaaattgttt tcgaaataat gtatccaacg cgtgttttaa
     1321 ctttactcat atatagttga attgtacctt gtgaaaaatc acgcgtaatt gtcttaacaa
     1381 caaacattaa tccaattatt aacaataacc attttgctgc agcaaataca gatccataga
     1441 caataatatg tttcgggtta tccatcgaat ttgccataag tatactttga gttgcaatca
     1501 aactagatac gactagtatc gctaaatatg ttaaaggact tttaaatata ctataaaaat
     1561 catacttaac taaatttaaa attctcatta tttatcacct ctttgattta tattgaagta
     1621 cgtatcacgc aatgaacttt tacgtgtttc aatatatttc ggataaatat ctaattcaga
     1681 taatgctttt agtataactt gataattttt ttgtgcattg atcattaaat gtccgtctgc
     1741 tttgtcgaca ttttgtaatt ggaaatgctc tgcaagatat ttttcagttc tatcaaagtc
     1801 tttatgatca acagtaacta tcgttgtgtc agatgcaaca ccttcctcca tgtttacatc
     1861 ttgaacaaaa tgtccgtctc ttaaaaatac agctctatca caaattaatt caatatcttc
     1921 taacttatga cttgatatta gaattctcat atcaagttca tttactagag acttaattgt
     1981 agtcagcaca tcaattgagc catctggatc cataccattt gtaggctcat ccaagattaa
     2041 aaatttaggt ttattcatta aagatactgc aattgctaac ttttgcttca tccccattga
     2101 atatttctta actttctttt taatataagg tctcatacca aatgcatcta taattttgtc
     2161 tgtgtatgct ttatcaaaac ccttacctaa tacttgtgca aataatttca agttatacaa
     2221 tcctgattta ttatcatata atttaggatg ctcaattaaa aaaccgatat tatctgcatt
     2281 atcaatgtct acttttccat caaatttaat aatattacca ttcattactt tcataacggt
     2341 tgttttacca acaccgtttt ttcctattaa tccgacaatt ctactatcgc caaagtcaaa
     2401 atcaatatca tttaaaacga catttgagcc gtattttttt gtaatatgtt ctaatttcat
     2461 cgactgcctc ctttaaattt tctagtattt attttattga gc
//
LOCUS       DAKPJH010000190         2292 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.193, whole genome shotgun sequence.
ACCESSION   DAKPJH010000190 DAKPJH010000000
VERSION     DAKPJH010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.193"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            95..208
                     /locus_tag="OY092_002664"
     CDS             95..208
                     /locus_tag="OY092_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077534.1"
                     /translation="MVKTMSIENMRTYQQRVYNLWIKGVDKGIYCGYQVGK"
     gene            complement(368..>2292)
                     /locus_tag="OY092_002665"
     CDS             complement(368..>2292)
                     /locus_tag="OY092_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HCX1077535.1"
                     /translation="LLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKSTLM
                     KIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIKEE
                     TDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDFNK
                     PINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVIIS
                     HDRYFLDKIVTQIYDVALGDVKRYVGNYEKFIQQRDLYYQKRMQEYESQQAEIKRLET
                     FVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVKNL
                     EIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANLQI
                     GYYDQKQAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGGEK
                     ARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALQHFEGTILFVSHDRYFINQLA
                     NKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSMEQSSYHNQK
                     EQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDSEQ
                     KLEHAMSKWEELQQKL"
BASE COUNT          671 a          366 c          354 g          901 t
ORIGIN      
        1 agatattttc taattgaaaa ttatcttact gctgtttttt tagggattta tgtcccagcc
       61 ttatttcata aagaaaatgt cttaacaatg gattttggta aaaacaatgt caatagagaa
      121 catgcgtact tatcaacaaa gagtgtataa cttgtggata aaaggtgttg ataaaggcat
      181 ttattgtgga tatcaggtgg ggaaatagaa aataaatgat tgattagtgt taatttactt
      241 gtggataact aggataagtc tgtggatagc tataatatca gcgtttttat tgtgaataaa
      301 aaaaattaaa atttgtaaaa aaataactct aactatagcg attttacagt tagagttatg
      361 tatattttta tagtttttgt tgtaattctt cccatttaga catagcgtgt tctaattttt
      421 gttcgctatc ttgtttttgg atagctaatt cgtttgcttt ttgtggattg ttatacactt
      481 ctggttgggt taattgctcg tctatttgta agatagtagt ctctaaagtt tctatttcat
      541 tttcacactc ggatatttgt cgttcaagtt tgcgttgttc acgtctttgt tctttttggt
      601 tatgatacga cgattgttcc atagactttt tatgtgcttg tacgttaact gactgttctt
      661 cttggtgcgc tttcaacgct tccgcttcct caactttttc aatgtaatat tgataatctc
      721 ctaaatacat ctttccgcca tcaattgtta aatcaaatac cttgtttgcc aattggttaa
      781 taaagtaacg atcatgggaa acaaatagta ttgttccttc aaaatgttgg agtgcttgct
      841 ctaacatttc ttttgaatct atatcgaggt ggttggtagg ttcatctaaa ataagtacat
      901 tgtcacgctg caacataagt agtgctagtt gtaaacgtgc tttttcacca ccagataaat
      961 cattaattat ctttttaaca tcgtcttgta caaataagaa acgtccaaga actgcacgaa
     1021 tatctttttc attcattaac ggatattgat cccacacata atctaaaatc gttttactag
     1081 atttaaattc tgcttgtttt tgatcataat aaccaatttg taaatttgcg ccgaaagtaa
     1141 tatcgccatt aagcgctttt tgttgattag caatagtttt aattaaggtc gattttccaa
     1201 taccatttgg cccaatgatt gctatatgat cgcctttaga gacctctata ctgataggtt
     1261 tggtaattgc agtttgataa ccgatttcta aattttttac atgcatgacg tcattacctg
     1321 tattccggtc aaagccaaat tgaatatttg cacttttggc atctaacatt ggtttatcaa
     1381 tgcgttccat tttttctaaa atcttacgtc tactttttgc cattccactt gttgaagcac
     1441 gtgtaatatt tttctcaaca aaagtttcta atcgttttat ttctgcttgt tggctttcat
     1501 attcttgcat tcgtttttga tagtataaat cccgttgctg tataaatttc tcgtaattac
     1561 caacatagcg tttgacatca cctaaagcca catcataaat ttgagtaact attttatcta
     1621 aaaagtaacg atcatggctg atgatgacga ttgcaccttt aaaataacgt agataatctt
     1681 caagccactt tgtcgtttct aaatctaagt ggttagtagg ttcatctaaa agtaataaat
     1741 caggttcatt taatagcatt tgagctaaag ataaacgtgt tttttggcca ccgctaaaat
     1801 cattgatagg tttattgaaa tcttcttcac taaaatttaa cccgtgaagt actgttttaa
     1861 ttttactttc atattgatat ccttctaatt gttcaaattg attcgataaa gattcataac
     1921 gggacatatg tgttttatat gtatcactat cgtaatcatt tgcatgtttt gataaccaat
     1981 ctgtttcttc tttgattaag ctttccattc gtttaatatg ttcaaatggt tttgacattt
     2041 cttcaaaaac tgttgcatta gaatttaaag tcatttgttg agttaaataa cctagtttta
     2101 agtttttaat ttttgacaca tttccagaat catagttttc tacgccagct ataattttca
     2161 tcaatgttga tttaccggcg ccatttcttc ctacgatacc aattcgttcg ccagttttca
     2221 cttcaaaatc aacatcagta aatatatctt caccatcgaa cgattttgat atatgattga
     2281 gttgtaaaag ta
//
LOCUS       DAKPJH010000191         2275 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.194, whole genome shotgun sequence.
ACCESSION   DAKPJH010000191 DAKPJH010000000
VERSION     DAKPJH010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.194"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            11..1156
                     /locus_tag="OY092_002666"
     CDS             11..1156
                     /locus_tag="OY092_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HCX1077536.1"
                     /translation="MIRIQDNTIRDGMQQSNVRKSIIVKKEVLQEINKISINSVEVGM
                     CTTFEDEYNIHQYREILNNDKEIVVLTRLDENEINKILNLKIHNLAVKILLPISDLHI
                     KEKLNFTSEYYNERINKCLNMIKVNQVAIDICFEDATRCSLEKLCEYMEMISKFPIRT
                     VTFADTVGCSTPFEYGNIFKEFVKKYPNITFSAHCHNDLGLATANTFAAILNGAQQIE
                     TTFLGIGERAGNASIEEIIAILTKKQIVMTSLNLPDIYKTSMNISKILDIRLAENKPV
                     IGKNIFKHESGIHQDGTNKNISMYQYILPSDLGLKNSKAVQFPISNISSKKILKNKFK
                     SIVHPKDIEENISFYKLINKFIPEVVPEDTADLLQVIKGRSKDGNFK"
     gene            1140..1781
                     /locus_tag="OY092_002667"
     CDS             1140..1781
                     /locus_tag="OY092_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HCX1077537.1"
                     /translation="MEILNESVESFEKLYLQLQNSYPIIVPTDTNYNLCSLPNNKICI
                     DRIFKYKKRSKDKPLSLFIDEPEDWKLYGENKNVELVDKLVNIFWPGPLNIILKNKTN
                     YNYMLNNSDSIAIGCVQNKTMRNLISYIQSPIAITSANISGTADDILITENEAIKHMG
                     NNVNYMLRSKNKSKYKSSSTIIKVTGNKIELLREGDIKFEEIKAKLGSGIQYE"
     gene            1774..>2275
                     /locus_tag="OY092_002668"
     CDS             1774..>2275
                     /locus_tag="OY092_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077538.1"
                     /translation="MNKLILGIYLYRILSRAYFYLPFLLIYFLAQNYSIMQLEILMAT
                     YGVAAFLFGLYKEKIFRIYQIKDAYKLIVSEVFKIIGLILLLYPSHFYILLVAQLLLG
                     LSYSIMAGVDTSIIKMNIKNHKLIQNKSNGYMFLSLLISGIIGSYLYGINIKWPIYMT
                     GLFSILT"
BASE COUNT          928 a          253 c          346 g          748 t
ORIGIN      
        1 gtgaagtaat atgattcgaa ttcaagataa tacaataagg gatggtatgc aacaaagtaa
       61 tgttcgtaaa agcattattg taaaaaaaga agtgttacaa gaaataaata agataagcat
      121 aaattctgtg gaagttggca tgtgcacaac ttttgaggat gaatataata ttcatcaata
      181 ccgagaaatt ttaaataatg ataaagaaat agtagtctta actcggctag atgaaaatga
      241 aattaataaa attctaaatt taaaaataca taacctagca gtaaaaatac ttttaccaat
      301 atctgattta cacataaaag aaaaacttaa cttcacaagt gagtattaca atgaacgaat
      361 taataagtgt ttaaatatga taaaggtaaa tcaagtagca attgatattt gttttgaaga
      421 tgctacaaga tgttcattag aaaaattatg tgaatatatg gaaatgattt caaaatttcc
      481 aataagaaca gttacttttg ctgatactgt tggatgttca actccatttg aatatggaaa
      541 tatttttaag gaatttgtaa aaaaatatcc aaatataact ttttctgctc attgtcataa
      601 tgatcttgga ttggctactg ccaacacatt tgctgctatt ttaaatggtg cacagcaaat
      661 cgagacaact tttttaggaa ttggtgaaag agcaggtaat gcctcaattg aagagataat
      721 agcaatttta acaaaaaagc aaatagtaat gacttcattg aatttaccag atatttataa
      781 aactagcatg aatataagta aaatacttga tattcgatta gctgaaaata aacctgttat
      841 cggaaaaaat atatttaaac atgaatcagg cattcatcaa gatggcacta ataaaaatat
      901 aagtatgtac cagtatatat tacctagtga tttaggatta aaaaattcaa aagcagtgca
      961 atttccaata agtaatattt cgagtaagaa aattttgaaa aataaattta aatcaattgt
     1021 gcatcctaaa gatattgagg aaaacatatc attttataaa ctcataaaca aattcatacc
     1081 tgaggttgta cctgaagata cagcagactt acttcaggta ataaaaggga ggagtaaaga
     1141 tggaaatttt aaatgaatct gttgaaagct ttgaaaaatt atacttacaa ctacaaaata
     1201 gttaccccat aattgttccc acggatacaa attataattt atgcagcttg cctaacaata
     1261 aaatttgcat tgatagaata tttaaatata aaaagcgttc aaaagacaaa ccgttatctt
     1321 tatttattga tgaaccagaa gactggaaat tatatggaga aaataaaaat gtagaattag
     1381 tagataaact ggttaatata ttttggccag gtccattaaa tattattttg aaaaataaaa
     1441 cgaattataa ctacatgctt aataattcag atagtattgc gattggatgt gttcaaaata
     1501 aaacaatgag aaatctaatt tcctacattc aatcaccaat tgctatcact tcagcgaata
     1561 tttcaggaac tgctgatgat atattgataa ctgaaaatga agcaattaaa catatgggga
     1621 ataatgttaa ttatatgctt aggagtaaaa ataaaagtaa atataaatca tcaagtacga
     1681 ttattaaagt gacggggaat aaaattgaac tcttaagaga aggggatata aaattcgaag
     1741 aaataaaagc aaaactaggt tcaggtattc aatatgaata aattaatact tggaatttat
     1801 ttatatcgaa ttttgtcaag agcttacttc tatttgccat ttttattaat ttatttttta
     1861 gcacaaaact attctataat gcagttagaa atactaatgg cgacatatgg agttgcagct
     1921 tttttgttcg gtttatataa agagaaaata tttagaattt atcagataaa agatgcttat
     1981 aaattaattg tgagtgaggt atttaaaata ataggcttaa tattattatt gtatccaagc
     2041 catttttata ttttattagt agcccaactg ttattaggtt tgagttattc aataatggct
     2101 ggagtagata cttctattat taaaatgaat ataaaaaatc ataaacttat acaaaataaa
     2161 tctaatggtt atatgttttt atcattatta atttcaggaa ttattgggag ttacctttat
     2221 ggaattaata taaaatggcc gatttatatg acaggtttat tttcgatttt aacaa
//
LOCUS       DAKPJH010000192         2229 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.195, whole genome shotgun sequence.
ACCESSION   DAKPJH010000192 DAKPJH010000000
VERSION     DAKPJH010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.195"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..374
                     /locus_tag="OY092_002669"
     CDS             <1..374
                     /locus_tag="OY092_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077539.1"
                     /translation="VSFLKGFLGFFMEKSGSNLYFVSFPFSVVVGFFIVFLFIWFSFK
                     TIQLQCFNNSNWIWIFTYLAIILLIVGFFYVFFIPQSLLAFGPYIQVSNWVFIIFSFI
                     VMPIGLRIERNISKKHSHTFL"
     gene            complement(473..961)
                     /locus_tag="OY092_002670"
     CDS             complement(473..961)
                     /locus_tag="OY092_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HCX1077540.1"
                     /translation="MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHN
                     QHLSWVFYVSMALLTILILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFG
                     IIIIPFILVFIVELIQGYSFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALL
                     IN"
     gene            complement(958..2178)
                     /locus_tag="OY092_002671"
     CDS             complement(958..2178)
                     /locus_tag="OY092_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HCX1077541.1"
                     /translation="MDMFAALLQIKNYKLFVANMFLLGMGIAVTVPYLVLFATKDLGM
                     TTNQYGLLLASAAISQFTVNSIIARFSDTHHFNRKIIIILALLMGALGFSIYFFVDTI
                     WLFILLYAIFQGLFAPAMPQLYASARESINVSSSKDRAQFANTVLRSMFSLGFLFGPF
                     IGAQLIGLKGYAGLFGGTISIILFTLVLQVFFYKDLNIKHPISTQQHVEKIAPNMFKD
                     KTLLLPFIAFILLHIGQWMYTMNMPLFVTDYLKENEQHVGYLASLCAGLEVPFMIILG
                     VLSSRLQTRTLLIYGAIFGGLFYFSIGVFKNFYMMLAGQVFLAIFLAVLLGIGISYFQ
                     DILPDFPGYASTLFSNAMVIGQLGGNLLGGAMSHWVGLENVFFVSAASIMLGMILIFF
                     TKNQKITKEDVIST"
BASE COUNT          834 a          380 c          309 g          706 t
ORIGIN      
        1 ttgttagttt tctcaaagga tttttaggat ttttcatgga aaaaagtgga agtaatttat
       61 attttgtttc gttcccgttt tcagtagtcg tcggattctt tattgtcttt ttatttatat
      121 ggtttagttt taaaacaata caattgcagt gttttaacaa ttcaaattgg atatggatat
      181 tcacctattt agcaatcatt ctactaattg taggattttt ctatgtattc tttattccac
      241 aatcattact tgcctttgga ccatatattc aggtaagcaa ttgggtattt attatatttt
      301 catttattgt tatgcctatt ggattacgca ttgaaagaaa tatttcgaaa aaacattctc
      361 atacattttt ataaactaaa agcttattac atcatatgcg aatttggtac tgttcatgat
      421 aaaatcacaa aattacagtt accgaaaaac atattttgca ataagctttt tattaattaa
      481 tcaataaagc atctataaag aaccatacaa tcattataaa cataatgatt gcttgagcta
      541 tactacttgt taaaaatgct acgattgaac ctatacttac tttaactgct ctttcaaatg
      601 aatagccttg tattaattca actatgaata ccaaaataaa aggtataata ataattccaa
      661 atggcggtaa aacaaaacat ccaataacca caccaattaa agctgcatac tctccaaact
      721 tagaaccacc gaagcgattc acaaaatatt tattagctaa aaagtccgca cataaaatta
      781 atattgttag caatgccata gatacataaa acacccatga taaatgctga ttatgaaagc
      841 caaattgata gattagaaag ccaacccata atactaaaac agaaggaata atcggcttaa
      901 tcaacccaac aaatgctaac atgaaggcag caatgataag tagccataaa ataattgtca
      961 tgttgatatc acatcctctt ttgtaatttt ttgattttta gtaaagaata taagtatcat
     1021 acctaacatg attgatgctg ctgatacaaa aaatacattt tccaaaccta cccagtgact
     1081 catagcacca cctaataagt taccgcctaa ctgtccaata accattgcat tagaaaatag
     1141 tgttgaggcg tatcctggga aatctggtaa gatatcttgg aaataactaa taccaattcc
     1201 taaaagaacc gctaagaaaa tagctaaaaa cacctgtcct gctaacatca tatagaagtt
     1261 tttaaatacc ccaatgctga agtagaataa accaccaaat atcgctccat aaatcaacaa
     1321 tgttcgagtc tgtaatctag atgataaaac gccaagaatg atcataaatg gcacttctaa
     1381 accagcacat aaactagcta aataaccgac atgttgctca ttttctttta aataatcagt
     1441 aacaaataaa ggcatattca tcgtatacat ccattgtcca atgtgtaata aaataaatgc
     1501 aataaatggt aataaaagtg ttttgtcttt aaacatatta ggagcaattt tttcaacatg
     1561 ttgttgcgta ctaatagggt gtttaatgtt taaatcctta tagaaaaaca cttgaagtac
     1621 taaagtaaat aaaatgatac ttattgttcc accaaacaat ccagcatagc cttttaatcc
     1681 gattaattgg gcaccaataa atggaccaaa taaaaagccc aatgagaaca ttgaacgtaa
     1741 tactgtgttg gcaaattgag ctctatcttt agagcttgaa acattgatag attctctagc
     1801 agatgcgtaa agttggggca ttgctggtgc aaataatcct tggaaaatcg catatagtaa
     1861 tatgaataac cagattgtat ctacaaaaaa gtatattgaa aaaccaagcg cacccattaa
     1921 taatgcgaga ataataataa tttttctatt aaagtgatgc gtatccgaaa atctagcaat
     1981 aattgaattt actgtaaact ggctaatcgc tgcagatgct agaagtaatc catactgatt
     2041 tgttgtcata cctaaatctt tagttgcaaa aagaacaaga tatgggaccg taaccgcaat
     2101 acccatacct agtagaaaca tattagcaac aaagagttta taattcttta tttgtaataa
     2161 cgctgcaaac atatccataa ccccacttct tagagcccct tttaatttat taattagggg
     2221 ctcttatgc
//
LOCUS       DAKPJH010000193         2206 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.196, whole genome shotgun sequence.
ACCESSION   DAKPJH010000193 DAKPJH010000000
VERSION     DAKPJH010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.196"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            100..1911
                     /locus_tag="OY092_002672"
     CDS             100..1911
                     /locus_tag="OY092_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCX1077542.1"
                     /translation="MDTKDFKRLEKMYSPRYLPGLDGLRAFAVIGIIIYHLNAQWLSG
                     GFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLIPAVLFLICVVLTFT
                     LIFKPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIEPLKHLWSLAIEEQFYLL
                     FPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNSRVYFGTDTRLQTLLL
                     GCILAFIWPPFALKKDISKKIVVSLDIIGISGFAVLMTLFFIVGDQDQWIYNGGFYII
                     SFATLFIIAIAVHPSSLFAKFLSMKPLLIIGKRSYSLYLWHYPIIVFVNSYYVQGQIP
                     VYVYVIEIVLTALMAEISYRFIETPIRKKGFKAFAFLPKKKGQFARTVLVILLLVPSI
                     VVLSGQFDALGKQHEAEKKEKKTEFKTTKKKVVKKDKQEDKQTANSKEDIKKSSPLLI
                     GDSVMVDIGNVFTKKIPNAQIDGKVGRQLVDATPIVKSQYKDYAKKGQKVVVELGTNG
                     AFTKDQLNELLDSFGKADIYLVSIRVPRDYEGRINKLIYEAAEKRSNVHLVDWYKASA
                     GHPEYFAYDGIHLEYAGSKALTDLIVKTMETHATNKK"
BASE COUNT          753 a          304 c          404 g          745 t
ORIGIN      
        1 agggttaaat caattaatga aaatcagtgc aatattttat tttcaaaaat attatgatat
       61 gctacaaaat agagaaaaat aaatggggcg tttattaaca tggatacaaa agactttaaa
      121 cgtttagaaa aaatgtattc cccgcgatac ttacccggat tagatggatt gagggcattc
      181 gcagttatag gaatcattat ttatcacttg aatgcacaat ggttaagtgg gggcttttta
      241 ggagtagata cattcttcgt tatttcaggt tatttaataa caagtttgtt gataagtgag
      301 tattatcgga cgcaaaaaat cgatttgcta gagttttgga agcgacgatt gaaacgactc
      361 attccggcag tgttgttttt aatctgtgtc gtgcttacgt tcacactgat atttaaaccg
      421 gaattgatta tacaaatgaa acgagatgct attgcagcta tattctatgt ttcaaactgg
      481 tggtacattt cacagaatgt agattatttt aaccaatttg ctattgaacc actcaaacat
      541 ttatggtctt tagccattga agaacaattt tacttgcttt tcccattggt tatcacgttc
      601 ttattacata gatttaaacc gagaaatatt attcaaacgc tatttattgt atcgttgatt
      661 tctttaggac ttatgatagt gattcatttc atcactggag ataattcacg tgtgtatttt
      721 gggacagata cacgactgca aactttattg cttggttgta tattagcatt tatttggcct
      781 ccgtttgctt tgaaaaaaga tatttctaaa aagattgtcg tatcattaga tattataggg
      841 atatctggtt ttgcggttct aatgactttg ttctttatag ttggagacca agatcaatgg
      901 atctataatg gaggatttta cattatatca tttgcaactt tattcattat tgcaattgcg
      961 gtacatcctt ctagtttatt tgctaaattt ttaagtatga aacctttgct aattataggt
     1021 aaacgatcat atagcttata tttatggcat tatcctatca ttgtttttgt gaacagttat
     1081 tacgtacaag gacaaatacc tgtatacgtc tatgtgatag aaattgtatt aacagcgtta
     1141 atggctgaaa tttcgtatcg ctttattgaa acacctatac gtaaaaaagg atttaaagct
     1201 tttgcatttt tacctaaaaa gaaggggcaa tttgctagaa cagtgttagt tatcctatta
     1261 ttggttccgt ctatcgttgt gctcagtgga cagtttgatg cacttggcaa acaacatgaa
     1321 gccgagaaga aagagaagaa gacggaattt aaaacaacga agaaaaaagt cgttaaaaaa
     1381 gataagcaag aggataagca gacagcgaat agcaaagagg atattaaaaa gtcatcacca
     1441 ctattaattg gtgactcggt catggtggat attggtaatg tctttactaa gaaaatacca
     1501 aatgcacaaa ttgatggtaa agttggacgg caactcgttg atgctacacc aattgtgaaa
     1561 tcgcaatata aagactatgc taaaaaaggt caaaaagttg tagtagagct tggtacaaat
     1621 ggggcattta cgaaagatca attaaatgaa ctattggata gttttggaaa agcagacatt
     1681 tatttagttt ctattagagt acctagagat tatgaaggta gaataaataa attaatttat
     1741 gaggcagctg aaaagcgctc taatgtacat ctagtcgatt ggtataaagc ttctgcaggt
     1801 catccggaat actttgcata tgacggcata catttggaat atgcaggtag taaagcgctg
     1861 actgatttga ttgtaaaaac gatggaaaca catgctacaa ataaaaaata acttgatgca
     1921 ctaaactttt gaaatattac attacttctg atatttattg tcagttcgtg tgtatttcat
     1981 taaaagttta gtgctttttt attttcaaat cccatgttaa cggtgcagaa aaagtgttgt
     2041 aaacattcta attggtatat tacattcaat gaagctttat taggaacaga ttacattatg
     2101 ataacaaagc ccgcaagaca cctaatctct gttatagttt attttgtcgc aaaactataa
     2161 aagttataat tatttgcata ctaaaaaaat aaaaaatata aaattt
//
LOCUS       DAKPJH010000194         2145 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.197, whole genome shotgun sequence.
ACCESSION   DAKPJH010000194 DAKPJH010000000
VERSION     DAKPJH010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.197"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..127
                     /locus_tag="OY092_002673"
                     /pseudo
     CDS             1..127
                     /locus_tag="OY092_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
     gene            complement(338..1138)
                     /locus_tag="OY092_002674"
     CDS             complement(338..1138)
                     /locus_tag="OY092_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1077543.1"
                     /translation="MVKAIAVDMDGTFLDSKKTYDKPRFEAIFTELRNRDITFIAASG
                     NQYAKLKSIFGDRDMYFISENGAVIYKGNELYNYKSFNRQVFQQVVDYLNMNQGIDQL
                     VICGLKSAYILKHTSEAFKEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNV
                     DEEVATQFSNDIKLVSSGHDSIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANND
                     KDMLAFAKHSYVMENSHDEELFNIASAVAPSNDKQGVLTIIEQEVLNK"
     gene            1459..2094
                     /locus_tag="OY092_002675"
     CDS             1459..2094
                     /locus_tag="OY092_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1077544.1"
                     /translation="MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAK
                     DFLLNNSGNIPKSISQNVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNIL
                     NIEAIPSNVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLND
                     FIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQIEEYQSKEEVINDYINL"
BASE COUNT          765 a          350 c          273 g          757 t
ORIGIN      
        1 agtttcatag tcaatgttta aagcaaaacc ttattgatga taattcgatt tttattgatg
       61 tacaaaagta gaagctaatg ccaataggta tacatttgcg tggaagaaaa gtattcaaaa
      121 tcatgaattg ttttattttg tatatctgta tcaaaatcga tttgattaaa atccgcttta
      181 ttttatcatc tattcaaatg attttagtgc gcttatttta ctatggcatt attgtctaac
      241 ctgtttgaga tatattaata tttgatgatt cgtattcaga gttttcattt aacatgtatt
      301 tagtatcata atagctactt cattgatgat gtactaccta cttgttcaat acttcttgtt
      361 cgataattgt taaaacacct tgcttatcgt tacttggagc gacagcagag gcaatattga
      421 acaattcttc atcatgacta ttttccatca cataactatg cttagcgaac gctagcatat
      481 ctttatcatt attcgcatct ccaaaggcca tgagctctga aggagacatt tcccatttat
      541 ctaacaatcg ttttaatgcc tgccctttag tcatgtttgg cataataata tcaatactat
      601 cgtgcccact tgagacaagt ttaatatcat tgctgaattg cgttgctact tcttcgtcaa
      661 cattcggatg cgtctcacga ttaatattaa atgctatttt gacataatca tcctcaggta
      721 attgttgtag actatcaatt tcttttaact gatgataata aaatctcgta tcttctttaa
      781 atgcttcaga agtatgtttc aaaatatacg cgcttttcaa accacagatg acgagttgat
      841 caataccttg gttcatattt aagtaatcga caacctgttg aaacacctga cgattaaagc
      901 ttttataatt atataactca ttgcctttat aaataactgc accattttca gaaataaaat
      961 acatatctct atccccgaaa atagacttca acttcgcata ttgattgcca ctcgcagcaa
     1021 taaatgtaat atctctattt ctaagttcag taaaaatcgc ttcaaatctt ggtttatcgt
     1081 atgtcttttt cgaatctaaa aacgtcccgt ccatatctac cgcaatagcc ttaaccatga
     1141 ttatcctcct cattgctctt ttagtcgtct tcattatatc catctcatga caagcaatga
     1201 agtttgtcat accacaatga acctatattc acattttgaa attgctttca tatatgcaaa
     1261 acacattaca ctggatatag cattcgaagg cgaacataaa tttcagaata ttgtaaaaat
     1321 ataacgatat atttatcatt tggacaaaat atagtgtgat atactaattt ataacatcta
     1381 tacataatgt gaaagaattt tcaaaaatac aattaaatat cggtgtaata aatcccttta
     1441 tacataggag ttgtatacat gaaactaaat aactattctt taaaagttaa aaacaaacaa
     1501 ctagttgaca attgtgattt aaatttctat cttggtcaga tcaatcacat tgttggtaaa
     1561 aatggtgtag gaaaatcttt attagctaaa gatttcttac taaataatag tggaaatatc
     1621 cctaagtcca tttctcaaaa tgtaacctta atatcaagtt catcaaatat tcctaatgat
     1681 ataacaaaag attttttatt atcattgtta aaatcaaaat ttgaaaacaa tcgacaaaca
     1741 ttcgataaga tttataacat actaaacatc gaagcaatac cgtctaacgt actactaaaa
     1801 aacttgagtg atggtcaaaa acaaaagctt aaattattaa gtttcttatt ggaagatcat
     1861 gatttaatca tattagatga agttacaaac gctttagaca agaaaacagt taatgaaatt
     1921 tatgaatttt taaatgattt tattcaaagc catcaaacta aaactattat caatattaca
     1981 cataatttat ccgatttaag tgctttgccg ggtaaatact ttatttttaa agaccttcaa
     2041 atagaagagt accaatcaaa agaagaagtc ataaatgatt acattaattt ataattgagg
     2101 tgtccacttt gaaattagaa tttaaaaaaa gtatttccaa taaaa
//
LOCUS       DAKPJH010000195         2101 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.198, whole genome shotgun sequence.
ACCESSION   DAKPJH010000195 DAKPJH010000000
VERSION     DAKPJH010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.198"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            13..672
                     /gene="arlR"
                     /locus_tag="OY092_002676"
     CDS             13..672
                     /gene="arlR"
                     /locus_tag="OY092_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor ArlR"
                     /protein_id="HCX1077545.1"
                     /translation="MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH
                     YYDLIILDLMLPSINGLEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKP
                     FDIEELLARIRAILRRQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLA
                     ENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVI
                     R"
     gene            669..2024
                     /gene="arlS"
                     /locus_tag="OY092_002677"
     CDS             669..2024
                     /gene="arlS"
                     /locus_tag="OY092_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase ArlS"
                     /protein_id="HCX1077546.1"
                     /translation="MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDD
                     AERSSSDINNLFHSKTVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEP
                     GYEHRYFDRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALA
                     FGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANT
                     FNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNIS
                     IEEMNRIIKLVEELLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDL
                     TSKNLEIKMKPHQFEQLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIP
                     EEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQLNGGSIKIKSEINKGTTFKII
                     F"
BASE COUNT          808 a          280 c          360 g          653 t
ORIGIN      
        1 tgaggtgtac aaatgacgca aattttaata gtagaagatg aacaaaactt agcaagattt
       61 cttgaattgg aactcacaca tgaaaattac aatgtggaca ctgagtatga tggacaagac
      121 ggtttagata aagcgcttag ccattactat gatttaatca tattagattt aatgttgcct
      181 tcaattaatg gcttagaaat ttgtcgcaaa attagacaac aacaatctac acctatcatt
      241 ataattacag cgaaaagtga cacgtatgac aaagttgctg ggcttgatta cggtgcagac
      301 gattatatag ttaagccatt tgatattgaa gaacttttag caagaattcg tgcgatttta
      361 cgtcgtcagc cacaaaagga tattatcgat gttaacggta ttacaattga taagaatgct
      421 tttaaagtga cggtaaatgg cgcagaaatt gaattaacaa aaacagagta tgatttacta
      481 tatcttctag ctgaaaataa aaaccatgtt atgcaacggg aacaaatttt aaatcatgta
      541 tggggttata atagtgaagt agaaacaaat gtcgtagatg tttatataag atatttacga
      601 aacaaattaa aaccatacga tcgtgacaaa atgattgaaa cagttcgtgg cgttgggtat
      661 gtgatacgat gacaaaacgt aaattgcgca ataactggat tattgttacc acgatgatta
      721 cgtttgtcac gatatttttg ttttgtttaa ttattatctt tttcttgaaa gatacactgc
      781 ataatagtga gcttgatgat gcagaacgaa gctcaagcga tattaataat ttatttcatt
      841 ctaagactgt taaagatata tctgcattag acttgaatgc atctttaggt aattttcaag
      901 agattattat ttatgatgaa cataataata aattatttga gacatcgaat gataacacag
      961 tgagagttga accaggttat gaacaccgtt attttgaccg cgtaataaaa aaacgctata
     1021 aaggcattga atatttaatt attaaagaac caatcacaac gcaagatttc aaagggtata
     1081 gcttgttaat tcattcacta gaaaattatg ataacatcgt aaaatcattg tatatcattg
     1141 cgctcgcatt tggagtgatt gcaacaatta taactgccac aatcagttat gtattttcaa
     1201 ctcaaattac taaaccgctt gtcagtttat caaataaaat gattgagatt cgacgagatg
     1261 gatttcaaaa taaattgcaa ttaaatacaa attatgaaga aatagataat ctagcaaata
     1321 cgtttaatga gatgatgagc caaattgaag aatcatttaa tcaacaaaga caatttgttg
     1381 aagatgcatc acatgaatta cgaacaccat tacaaattat tcaaggtcat ttaaatttga
     1441 ttcagcgatg gggaaaaaaa gatccagcag tattagaaga atcgttaaat atttctattg
     1501 aagaaatgaa tcgtatcata aaattagtcg aagaattact tgaattgact aaaggagatg
     1561 taaatgacat ttcttctgaa gcgcagaccg tgcatattaa tgatgaaatt cgctcgcgaa
     1621 tacactcatt aaaacaatta catcctgatt atcaatttga tacggatctg acatctaaaa
     1681 atttagaaat taaaatgaag cctcatcaat ttgaacaatt atttttaatc tttattgata
     1741 atgcaatcaa atatgatgtg aagaataaga aaattaaagt taagacaagg ttaaaaaata
     1801 agcaaaaaat aattgaaatt acagatcatg gaattggtat tccagaggaa gatcaagatt
     1861 tcatttttga tcgcttttat cgagtggata aatctcgttc aagaagtcaa ggcggtaatg
     1921 gactcggatt atctattgct caaaaaatca ttcaattaaa cggtggatcg attaaaatta
     1981 aaagtgaaat taacaaagga acaacgttta aaatcatatt ttaattatgt ttgagccgtc
     2041 aatcaaaatc ataggatcaa ttttttaagt gaggctggga cataaatcaa tgttctatgc
     2101 t
//
LOCUS       DAKPJH010000196         2076 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.199, whole genome shotgun sequence.
ACCESSION   DAKPJH010000196 DAKPJH010000000
VERSION     DAKPJH010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.199"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(100..399)
                     /locus_tag="OY092_002678"
     CDS             complement(100..399)
                     /locus_tag="OY092_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion target"
                     /protein_id="HCX1077547.1"
                     /translation="MSSKDAKKSQEEARLQQLKQEMRNSTDNMVSNAKNNVALKSQTL
                     NEIIETINNSSQNLEGTFEGKASEAAQQSINKLKSNNENLKQKFETLLNTMKING"
     gene            complement(414..2027)
                     /locus_tag="OY092_002679"
     CDS             complement(414..2027)
                     /locus_tag="OY092_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001836790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipase"
                     /protein_id="HCX1077548.1"
                     /translation="MLLRDSDARMLSENSYDKLSVDEVYTFSNKKQYKVIEKRDDTQN
                     GFRAYVFAPVIKGKVDKSQLLIGYAGTDPYSLNDIRTDLQLPIHHNTNNLKINNHYKD
                     LKNSTIHKKYNTIKDKNDLFSFSSNLNSKALFGDLWAAKFAPTQMDESDAFTESVKKK
                     YPDSEIHPLGHSLGAFLAQYNLIKHNLDNGTTFAAPNVYHSFTGDFKKDIDNGVYDSK
                     IRNIGHFDDPINNFNFFDHPIGENIIVMPHYDGFITALPLIGQHTIESYNDFDADGTV
                     KEMPELEQFNHDPFLNNRFQLFDPFGINSRFFDSFKIDSSILNRPSENDFDPFAILNK
                     KDKLFESNDLDIEGFNNKPKEDLSIDLNPFDDELNDEDEPLIPKRGDSKKLKAEKKIS
                     VKKGNGGSKNTGKKVKIQPDEVRNIANTIRDRIFLYSQIITALDEYREETISGANRIL
                     DKYQSDLLSGSHEFTTPYDHEQYMEILSVEGSFGNFKFYNSGLMDDLIQELDQNKKDL
                     LQFAEKLEFAANKFEEKDLEESDVFGLFS"
BASE COUNT          637 a          328 c          288 g          823 t
ORIGIN      
        1 acttgccgtc atgaaaatta aaatcccttc actatttgtt tagcgagggg attttcgtaa
       61 tgtataaaaa aatacagata aattaataat ttctcaatat tatccattta tcttcattgt
      121 atttaatagg gtctcaaatt tttgtttaag attttcatta ttgcttttga gtttatttat
      181 actttgttgg gctgcttcgc ttgcttttcc ttcaaatgta ccttctaaat tttgcgaaga
      241 attattaatt gtttcaatga tttcattcaa tgtttgagat tttaatgcta cattattttt
      301 agcattgcta accatattat cagtactatt acgcatttct tgctttaatt gttgtaatct
      361 agcttcttct tgacttttct ttgcatcttt tgagctcata taaattaccc tctttaacta
      421 aatagtccaa aaacatcgct ttcttctaag tctttttctt cgaatttatt tgcagcaaat
      481 tctagttttt cagcaaattg tagcaagtct tttttgtttt gatctaattc ctgaattaag
      541 tcatccatta aaccactatt ataaaacttg aaatttccaa aacttccctc aactgataaa
      601 atctccatat actgttcatg atcataaggt gttgtaaatt catgtgaacc gcttagaagg
      661 tccgattgat atttatctaa aatgcgatta gcccctgata ttgtttcttc tctatattca
      721 tccaatgcag taattatttg actatacaaa aatattctat cacgaattgt gttggcgata
      781 tttcgcacct catcaggctg gatttttact ttcttacctg tatttttgga accaccatta
      841 ccttttttaa cagagatttt cttttctgct tttaattttt tactatctcc tcttttggga
      901 attaatggtt cgtcctcatc atttaattca tcatcaaaag gatttaaatc aatgcttaaa
      961 tcttcttttg gtttattatt aaatccttct atatcaaggt catttgattc gaataattta
     1021 tcttttttat tgagaatagc aaaaggatca aaatcatttt cacttggtct atttaatata
     1081 gaactatcga ttttgaaaga gtcgaaaaat ctgctattta taccaaatgg gtcaaataac
     1141 tgaaatctat tattaagaaa tgggtcatga ttaaattgtt caagttctgg catttccttc
     1201 actgtaccat ccgcatcgaa atcattgtat gattcaattg tgtgttgacc aattaaagga
     1261 agagcagtta taaatccatc ataatgtggc attacaatta tattttcacc aattggatga
     1321 tcgaagaagt taaagttatt aataggatca tcaaaatggc caatattgcg tatttttgaa
     1381 tcatatacac cattatcaat gtctttttta aagtcgccag taaatgaatg gtatacgtta
     1441 ggtgctgcaa acgttgtacc gttatccaga ttatgtttta ttaaattata ttgagctaaa
     1501 aacgcaccta aactatgtcc taatgggtga atttcactat ctggatattt ctttttaact
     1561 gattcagtaa aagcatcact ttcgtccatt tgagtcggtg caaacttagc tgcccataga
     1621 tcaccgaaaa gtgctttact atttaaatta gaagaaaaac taaaaaggtc atttttatct
     1681 tttattgtat tgtatttttt gtgaatagtt gagtttttta aatctttata atgattatta
     1741 atttttagat tatttgtgtt atgatgaatg ggaagttgta aatcagtacg aatatcattt
     1801 agactatatg ggtcagtgcc agcgtaacct attaaaagtt gactcttatc aactttacct
     1861 ttgattactg gagcgaaaac atatgctcta aacccattct gggtgtcgtc gcgtttttcg
     1921 atgactttgt attgtttttt atttgaaaat gtatatacct catcaactga taacttatca
     1981 tatgaatttt cggataacat tcttgcatcg ctatctctta ataacatgtg gaacactcct
     2041 tataaaaaat aaaaaagagg taataataaa aatgaa
//
LOCUS       DAKPJH010000197         2024 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.200, whole genome shotgun sequence.
ACCESSION   DAKPJH010000197 DAKPJH010000000
VERSION     DAKPJH010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.200"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..225
                     /locus_tag="OY092_002680"
     CDS             <1..225
                     /locus_tag="OY092_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1381 domain-containing protein"
                     /protein_id="HCX1077549.1"
                     /translation="KAKSNQRFTVVEAESKEEAKEKYKARNAPVDGATNLNDIKSNIG
                     IFHVEKVEPNEGMVDINIETMKPFEEADDD"
     gene            218..454
                     /locus_tag="OY092_002681"
     CDS             218..454
                     /locus_tag="OY092_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000608273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077550.1"
                     /translation="MINIPKMKFPKKYTEIIKKYKNKTPEEKAKIEDDFIKEINDKDS
                     EFYSPMTANMNEHELRAMLRMMPSLIDTGDDNDD"
     gene            444..833
                     /locus_tag="OY092_002682"
     CDS             444..833
                     /locus_tag="OY092_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077551.1"
                     /translation="MMIKKLKNMDWFDIFIVGILRLFGVIALMLVVISPIYTVASYQN
                     KEVHQGTITDKYNKRQDKEDKFYIVLDNKQVIENSDLLLKKKFDSADIQAKLKIGDKV
                     EVKTIGYRIHFLNLYPVLYEVKKVDKK"
     gene            830..979
                     /locus_tag="OY092_002683"
     CDS             830..979
                     /locus_tag="OY092_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1077552.1"
                     /translation="MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYVFR
                     AEVSE"
     gene            979..1179
                     /locus_tag="OY092_002684"
     CDS             979..1179
                     /locus_tag="OY092_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1514 family protein"
                     /protein_id="HCX1077553.1"
                     /translation="MWITMTIVFAILLLVCISINSDRAREIQALRYMNDYLLDEVVKT
                     KGYNGLKEYRIELKRMNNDIKK"
     gene            1207..1623
                     /locus_tag="OY092_002685"
     CDS             1207..1623
                     /locus_tag="OY092_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCX1077554.1"
                     /translation="MIKIEKHDIKKLEEYIQHIDNYRRELKMREYELLESHEPDNAGA
                     GKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIG
                     CYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV"
     gene            1855..>2024
                     /locus_tag="OY092_002686"
     CDS             1855..>2024
                     /locus_tag="OY092_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000988331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCX1077555.1"
                     /translation="MMTKDERIRFYKSKEWQTTRKRVLERDNYECQQCKRDGKLTTYD
                     KSKHKSLDVDHI"
BASE COUNT          796 a          241 c          420 g          567 t
ORIGIN      
        1 aaagctaaga gcaatcaaag gtttacagtt gttgaggcag agagtaaaga agaagcgaaa
       61 gagaagtaca aggcgcgaaa tgcgccagtt gatggagcga ccaacttaaa cgatatcaaa
      121 tcaaatattg gtatctttca cgttgaaaaa gtcgaaccaa acgagggtat ggtggatatt
      181 aatattgaga caatgaaacc attcgaggag gcagatgatg attaacatac ctaaaatgaa
      241 attcccgaaa aagtacactg aaataatcaa aaaatataaa aataaaacac ctgaagaaaa
      301 agctaagatt gaagatgatt tcattaaaga aattaatgat aaagacagtg aattttacag
      361 tcctatgacg gctaatatga atgaacatga attaagggct atgttaagaa tgatgcctag
      421 tttaattgat actggagatg acaatgatga ttaaaaaact taaaaatatg gattggttcg
      481 atatctttat tgttggaata ctgcgattat tcggcgtaat cgcactgatg cttgttgtca
      541 tatcgcctat ctatacagtg gctagttacc aaaacaaaga agtacatcaa gggacaatta
      601 cagataaata taataagaga caagataaag aagacaagtt ctatattgta ttagacaaca
      661 aacaagtcat tgaaaactcc gacttattac tcaaaaagaa atttgatagt gcagatatac
      721 aagctaaatt aaaaattgga gataaagtag aagttaagac gattggatat agaatacact
      781 ttttaaattt atatccggtc ttatacgaag taaagaaggt agataaaaaa tgattaagca
      841 aatactaaga ctattattct tactagcgat gtatgagcta ggtaagtatg taactgagca
      901 agtatatatt atgatgacgg ctaatgatga tgtagaggcg ccgagtgatt acgtctttcg
      961 agcggaggta agtgagtgat gtggattact atgactattg tatttgctat attgctatta
     1021 gtttgtatca gtattaatag tgatcgtgca agggagatac aagcgctcag atatatgaat
     1081 gattatctac ttgatgaagt agttaaaact aaaggataca acgggttaaa agaatacagg
     1141 attgaattaa agcgaatgaa taacgatatt aaaaagtaat ttatattatc ggaggtattg
     1201 cattgaatga taaagattga gaaacacgat atcaaaaagc ttgaagaata cattcagcac
     1261 atcgataact atcgaagaga gttgaagatg cgagaatatg aattacttga aagtcatgaa
     1321 ccagataatg cgggagctgg caaaagtaat ttgccgggta acccgattga acgatgtgca
     1381 ataaagaagt ttagtgataa caggtacaat acattaagaa atatagttaa cggtgtagat
     1441 agattgatag atgaaagtga tgaggatacg cttgagttat taaggtttag atattgggat
     1501 tgtcctattg gttgttatga atgggaagat atagcacatt actttggtac aagtaagaca
     1561 agtatattac gtagaaggaa tgcactgatt gataagttag caaagtatat tggttatgtg
     1621 tagcggactt ttaccctatg taagtccgca ttaaaacagt ttattatgtt agtatcagat
     1681 taatatttaa agttattaaa tgctaatacg acgcatgaac aagaggcgca tcactatgtg
     1741 atgtgtcttt ttatttatga ggtatgaaca tgttcaaact aattgtaaat acattactac
     1801 acatcaagta tagatgcgtc ttgatactac ttaagttata taaggtgaaa cattatgatg
     1861 actaaagacg aacgtatacg attctataag tctaaagaat ggcaaacaac aagaaaaaga
     1921 gtactagaaa gagataatta tgaatgtcaa caatgtaaga gagacggcaa gttaacgaca
     1981 tatgacaaaa gcaaacataa gtcgttggat gtagatcata tatt
//
LOCUS       DAKPJH010000198         2003 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.201, whole genome shotgun sequence.
ACCESSION   DAKPJH010000198 DAKPJH010000000
VERSION     DAKPJH010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.201"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..433
                     /locus_tag="OY092_002687"
     CDS             <1..433
                     /locus_tag="OY092_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis-inhibiting protein CHIPS"
                     /protein_id="HCX1077556.1"
                     /translation="TTVLALSFLTAGISTHHHSAKAFTFEPFPTNEEIESNKKMLEKE
                     KAYKESFKNSGLPTTLGKLDERLRNYLKKGTKNSAQFEKMVILTENKGYYTVYLNTPL
                     AEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYAY"
     gene            complement(528..863)
                     /locus_tag="OY092_002688"
                     /pseudo
     CDS             complement(528..863)
                     /locus_tag="OY092_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500032.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
     gene            complement(1513..>2003)
                     /gene="sak"
                     /locus_tag="OY092_002689"
     CDS             complement(1513..>2003)
                     /gene="sak"
                     /locus_tag="OY092_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="staphylokinase"
                     /protein_id="HCX1077557.1"
                     /translation="LKRGLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYF
                     EPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEF
                     RVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKIIIE
                     KK"
BASE COUNT          701 a          344 c          303 g          655 t
ORIGIN      
        1 aacaacagtt ttagcattaa gttttttaac ggcaggaatc agtacacacc atcattcagc
       61 gaaagctttt acttttgaac cgtttcctac aaatgaagaa atagaatcaa ataagaaaat
      121 gttagagaaa gaaaaagctt ataaagaatc atttaaaaat agtggtcttc ctacaacgct
      181 aggaaaatta gatgaacgtt tgagaaatta tttaaagaaa ggcacaaaaa attctgctca
      241 atttgaaaaa atggttattt taactgaaaa taaaggttac tatacagtat atctgaatac
      301 accacttgct gaagatagaa aaaatgttga gttactaggt aaaatgtata aaacatactt
      361 ctttaaaaaa ggagagtcta aatcatctta tgtaattaat ggtcctggaa aaactaatga
      421 atatgcatac taatagtagt tacataaatt aaaaggtaga tatttctttt ttatataaag
      481 gtttggcaga catttcataa cttgccaaac ctttatatat ctaattatca aactgcacta
      541 aacttaccaa aactgcttat tctattacct gccttgtcta cctctcctgt cgctatataa
      601 cgacgttgtc cactattagc aatataagta atccatctat agccattaat gcaatatgcg
      661 ccgtcatatt tgatagttgc gttattgggt aatacacctg taattcttga attagttgaa
      721 tagccatccc tcacgttatt acctttaaca ttggcaactg tgtaataacc agtctctttt
      781 ttatacggta cattgttttt atcgagtgta taacctgctg gcactggtga attcttttca
      841 tttttagctg gtgttttaac attactgata cctgatacac acttccaata aaaataacca
      901 caccatttaa gatgcggtgt agcgactgta atatttctat gttgttgaga tatatgtatc
      961 gagtgaaggg caaaaaggat atcaattgca ggataagtgt taggttacta ggccacttaa
     1021 caggctatat agttcactcc tactatatac agttaattat aacataaaaa gcaccccgta
     1081 aactattata cgggaatgct aaagtcatat atactacgag ggagtagtat gaaaactatg
     1141 ctctctatca taagaaaaaa cacccagtga catgcttggg tgaacaagga tagatgtaaa
     1201 tagttgatgc atgtgtaaca catcataaca aaaaactagc ccgaaagcta gctataacat
     1261 acaatctaaa aagacgtccc ttgaatacgt ctagaaagat tataacataa aaaaataggc
     1321 aagtaccgaa gtacctgcct aaaaaaggat tatccacttt ttcatcctaa ctgatttctc
     1381 cccataagtc acctaatatc tgattaggtg gggaagaacc attcgtgcat gaatgagaat
     1441 ttgatgaaag ataattttca ctacacatat tcaatcaaga cattgctttc tataataaac
     1501 aactattttg ttttatttct tttctataat aatctttgta attaagttga atccagggtt
     1561 tttaatatgc tctgataaat ctgggacaac aaaacctttt tctgttatag ggaaagactt
     1621 cgtttcttct tttttcttat tcttatcata ataagtgact tcgatctttg cgcttggatc
     1681 taattcaact actctaaact ctttatatgc tgtcgcatct aatgcccatt cgacatagta
     1741 ttcaattttt tcttttgtaa gtgtagtccc aggtttaata ggaaactcga cataatgagg
     1801 ggatagcaat tcatttcctt taccatcaac tccagtcaca tttaccatca aatacgggcc
     1861 tgttggttca aaataactcg cgtcatcgcc ttttttatat tttcctttgt cgaatgaact
     1921 tgatgcactt acctcattag taattgaaga aaatgagaat aataacaata aaacagttaa
     1981 aaataataaa cctcttttga gca
//
LOCUS       DAKPJH010000199         1998 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.202, whole genome shotgun sequence.
ACCESSION   DAKPJH010000199 DAKPJH010000000
VERSION     DAKPJH010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.202"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..509
                     /locus_tag="OY092_002690"
     CDS             <1..509
                     /locus_tag="OY092_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015973974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toxin MazF"
                     /protein_id="HCX1077558.1"
                     /translation="FAIVMNKNDSNTEDIVNVIPLSSKENKKYLKMNFDLKWEYYLRL
                     FLNLISAQNNSAILKEVFDKKYQKNNTEFITKDYFSEFISDSLEIENKLNKIDRNINN
                     IVSAIDKVKKLKGNSYACINSFQPISKFRIRKVLPQKIKNPVIDSSDIMLLINRINNN
                     ILQIPDIR"
     gene            703..1908
                     /locus_tag="OY092_002691"
     CDS             703..1908
                     /locus_tag="OY092_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015986187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCX1077559.1"
                     /translation="MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQ
                     KEAMFRLEDKIKEKLNNQSSSILKTLTFHTLLDEWFEYHTKTSGFKVTTLDNLKTRIK
                     NIKKNSSQNLLLNKIDTKYMQTFINELSNIYSENQVKRQLGHMKEAIKYAVKFYNYPN
                     EHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAG
                     AVEVQALTGMRIGELLALQVKDVDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSRR
                     KIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAE
                     SLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDREL
                     EQKLEKLVY"
BASE COUNT          829 a          265 c          320 g          584 t
ORIGIN      
        1 actttgcaat agtgatgaat aaaaatgatt ctaatacgga agatatagta aatgttattc
       61 ccttatcttc taaagaaaac aaaaagtatt taaagatgaa ttttgatttg aaatgggagt
      121 attatttaag attgttttta aatttaatta gcgcgcaaaa taattcagct atattaaaag
      181 aagttttcga taaaaaatac caaaaaaaca acacagaatt catcactaaa gattatttta
      241 gtgaatttat atctgatagt ttagaaattg aaaataaatt aaataaaatt gacagaaaca
      301 ttaataacat agtatcagca attgataagg taaaaaaatt aaaaggtaat agttacgctt
      361 gcataaattc tttccagccg attagtaagt ttcgcataag aaaagtttta ccccaaaaaa
      421 ttaaaaatcc agtaatagat tcttcggata ttatgttact gataaataga attaataata
      481 atatattgca gattcctgat ataagatgat ataattttaa tatattaaag gtttatcctt
      541 taaaacacgt atatattcgt taccattttt ggtaattaac catgtaatct tataactata
      601 agtggcgtct gtattttata caggcgtctt tttttataca attttcatgg gtagcccgcc
      661 tacccttatt atttttttgc caattttgag gagggatgta aaatgtggtt tgaaaaattt
      721 aaaaataaga acaatgaaac gaagtataga tactacgaga aatacaaaga tccgtataca
      781 gataaatgga aacgtgtaag tgttgtcttg aataagaata caaagcaatc gcaaaaagag
      841 gcaatgtttc gattagaaga taagataaaa gaaaaattga ataaccagtc atcaagcatt
      901 ttaaaaactt tgacttttca tacactatta gatgaatggt ttgaatatca tacaaaaaca
      961 tctggcttta aagtaacgac gcttgataat ttgaaaacaa gaatcaaaaa catcaaaaag
     1021 aacagttctc aaaatttact tttaaacaaa attgatacaa agtacatgca aacatttatt
     1081 aacgaattat caaacatata ttctgaaaat caggtaaagc gtcaacttgg acatatgaaa
     1141 gaagctatta aatacgccgt taaattttac aattatccaa acgaacacat attaaatagc
     1201 gtcacactac caaagaagag taagacgata gaagatatag aaaaagaaga agcgaaaatg
     1261 tataactatt tagagatgga acaggtaata cagatacgcg attttatact gaacgataat
     1321 aacatgcagt atagagctcg tattttagtt gctggggctg ttgaagttca agctttaaca
     1381 ggtatgcgca taggtgagtt attagcgctc caagttaaag atgtagacct caaaaataag
     1441 acgatcgata ttaacggtac tattcacaga atcaaatgta atgctggatt tggtcacaaa
     1501 gatactacta agaccgcagg ttcaagaaga aaaatcgcca tcaattcaag gatagcaaat
     1561 gtattgaaaa aaataatgtt agaaaataaa aagatgcaac aatgggaacc aagctatgtt
     1621 gatagagggt ttatattcac aacttgccaa ggaaatccta tgcaaggcag taggataaac
     1681 aaacgattgt cctcagctgc agaatcatta aatataaata aaaaagttac tactcacaca
     1741 ctaaggcata cacacataag tttattggcg gaaatgaata tatcgttaaa agcaattatg
     1801 aaaagagtag gacatacaga tgaaaaaacg actataaagg tgtatacaca tgtaacagag
     1861 aaaatggaca gagagttaga gcaaaaatta gaaaaacttg tgtactaaaa ggtatctgcc
     1921 ctttttctgc ccttttttat ttttaaagac gctacaaatc ctttgtaaca actgatatta
     1981 aaggcttttt aacacaag
//
LOCUS       DAKPJH010000200         1965 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.203, whole genome shotgun sequence.
ACCESSION   DAKPJH010000200 DAKPJH010000000
VERSION     DAKPJH010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.203"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>1965
                     /locus_tag="OY092_002692"
     rRNA            <1..>1965
                     /locus_tag="OY092_002692"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          553 a          394 c          582 g          436 t
ORIGIN      
        1 tcgattccct tagtagcggc gagcgaaacg ggaagagccc aaaccaacaa gcttgcttgt
       61 tggggttgta ggacactcta tacggagtta caaaggacga cattagacga atcatctgga
      121 aagatgaatc aaagaaggta ataatcctgt agtcgaaaat gttgtctctc ttgagtggat
      181 cctgagtacg acggagcacg tgaaattccg tcggaatctg ggaggaccat ctcctaaggc
      241 taaatactct ctagtgaccg atagtgaacc agtaccgtga gggaaaggtg aaaagcaccc
      301 cggaagggga gtgaaataga acctgaaacc gtgtgcttac aagtagtcag agcccgttaa
      361 tgggtgatgg cgtgcctttt gtagaatgaa ccggcgagtt acgatttgat gcaaggttaa
      421 gcagtaaatg tggagccgta gcgaaagcga gtctgaatag ggcgtttagt atttggtcgt
      481 agacccgaaa ccaggtgatc tacccttggt caggttgaag ttcaggtaac actgaatgga
      541 ggaccgaacc gacttacgtt gaaaagtgag cggatgaact gagggtagcg gagaaattcc
      601 aatcgaacct ggagatagct ggttctctcc gaaatagctt tagggctagc ctcaagtgat
      661 gattattgga ggtagagcac tgtttggacg aggggcccct ctcgggttac cgaattcaga
      721 caaactccga atgccaatta atttaacttg ggagtcagaa catgggtgat aaggtccgtg
      781 ttcgaaaggg aaacagccca gaccaccagc taaggtccca aaatatatgt taagtggaaa
      841 aggatgtggc gttgcccaga caactaggat gttggcttag aagcagccat catttaaaga
      901 gtgcgtaata gctcactagt cgagtgacac tgcgccgaaa atgtaccggg gctaaacata
      961 ttaccgaagc tgtggattgt cctttggaca atggtaggag agcgttctaa gggcgttgaa
     1021 gcatgatcgt aaggacatgt ggagcgctta gaagtgagaa tgccggtgtg agtagcgaaa
     1081 gacgggtgag aatcccgtcc accgattgac taaggtttcc agaggaaggc tcgtccgctc
     1141 tgggttagtc gggtcctaag ctgaggccga caggcgtagg cgatggataa caggttgata
     1201 ttcctgtacc acctataatc gttttaatcg atggggggac gcagtaggat aggcgaagcg
     1261 tgcgattgga ttgcacgtct aagcagtaag gctgagtatt aggcaaatcc ggtactcgtt
     1321 aaggctgagc tgtgatgggg agaagacatt gtgtcttcga gtcgttgatt tcacactgcc
     1381 gagaaaagcc tctagataga aaataggtgc ccgtaccgca aaccgacaca ggtagtcaag
     1441 atgagaattc taaggtgagc gagcgaactc tcgttaagga actcggcaaa atgaccccgt
     1501 aacttcggga gaaggggtgc tctttagggt taacgcccag aagagccgca gtgaataggc
     1561 ccaagcgact gtttatcaaa aacacaggtc tctgctaaac cgtaaggtga tgtatagggg
     1621 ctgacgcctg cccggtgctg gaaggttaag aggagtggtt agcttctgcg aagctacgaa
     1681 tcgaagcccc agtaaacggc ggccgtaact ataacggtcc taaggtagcg aaattccttg
     1741 tcgggtaagt tccgacccgc acgaaaggcg taacgatttg ggcactgtct caacgagaga
     1801 ctcggtgaaa tcatagtacc tgtgaagatg caggttaccc gcgacaggac ggaaagaccc
     1861 cgtggagctt tactgtagcc tgatattgaa attcggcaca gcttgtacag gataggtagg
     1921 agcctttgaa acgtgagcgc tagcttacgt ggaggcgctg gtggg
//
LOCUS       DAKPJH010000201         1941 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.204, whole genome shotgun sequence.
ACCESSION   DAKPJH010000201 DAKPJH010000000
VERSION     DAKPJH010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.204"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..332)
                     /gene="deoC"
                     /locus_tag="OY092_002693"
     CDS             complement(<1..332)
                     /gene="deoC"
                     /locus_tag="OY092_002693"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HCX1077560.1"
                     /translation="MNSAKLIDHTSLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVK
                     YAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEA"
     gene            647..1357
                     /gene="deoD"
                     /locus_tag="OY092_002694"
     CDS             647..1357
                     /gene="deoD"
                     /locus_tag="OY092_002694"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCX1077561.1"
                     /translation="MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFND
                     VRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVN
                     LYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSD
                     TFYNADPTFNAAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPE
                     ERQNSFTQMMEIALEIAE"
     gene            complement(1479..1922)
                     /locus_tag="OY092_002695"
     CDS             complement(1479..1922)
                     /locus_tag="OY092_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HCX1077562.1"
                     /translation="MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKF
                     EELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDF
                     TNISKQLEKAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS"
BASE COUNT          608 a          346 c          305 g          682 t
ORIGIN      
        1 gcttcaatgt cttgttgtac atcatcaaaa cgcccatctt ttaatgcgcc gatgttgatg
       61 accatgtcaa tttcgtctgc accattttga attgcatctt ctgtttcaaa tgctttcgtt
      121 gcagttgtcg acgcacctaa tgggaatcct attaccgtac aaactaacac ctctgaatca
      181 gctagtcgct ctgctgcata tttaacatgc gttggattca cacatacaga tttaaaattg
      241 tatgctttcg cttcatcgat gatttgatcg atttgcgtac gtgttgactc aggcttcaat
      301 gaagtgtgat caatcaattt tgcactattc attttctatc tcctccttta tggttgatta
      361 taaaaatacg gttgtaaatt agttgattga gcgtcaggtt catttaaata tcaggttaga
      421 tgttcgcttt ttatgtaacc gcatacatat actattacat taattcattt cccataaaca
      481 aacaatacaa ttgaacgtga tatcttcatt atgaacgatg acttgacaac aagctaatca
      541 ggattatatt tttataattc tttaattcta tagtacaaaa attcgcaaaa aagggaaaca
      601 aatgttatct taaaattatt aatgaatatt aaggagaaga taacaaatga caaaaggtac
      661 accacatatt caaccaaatg gagtaaaaat tgctaaaaca gtattaatgc ctggcgatcc
      721 gctacgcgca aaatatattg ctgataattt tttagaaaat gttgaacaat ttaacgatgt
      781 acgtaacatg tttggttaca ctggtacata taaaggtaaa gaagtttctg taatgggttc
      841 tggtatgggt attccaagta tcggtattta ctcatatgag ttatacaact tctttgatgt
      901 agacacaatc attcgtatcg gttcttgtgg cgcattacaa gaaaatgtta acttatacga
      961 tgttattatt gcacaagctg catcaactaa ttcaaattat gtagatcaat acaatattcc
     1021 aggtcatttc gcgcctatcg ctgacttcga gttagtaact aaagctaaaa atgtcgctga
     1081 ccaaatcggt gctactacac acgtaggtaa cgtattatct tctgatacat tttacaatgc
     1141 cgatccaaca ttcaatgctg cttggaaaaa aatgggtatt ttaggtatcg aaatggaatc
     1201 agctggttta tatttaaatg cgattcatgc tggtaaaaaa gcacttggta ttttcacagt
     1261 aagtgatcat attttacgtg acgaagctac tacacctgaa gaacgtcaaa attcatttac
     1321 acaaatgatg gaaattgctt tagaaatcgc agagtaactt atttaaattg actttaattg
     1381 ctctttaaca atgagattaa actcaaaaag ccaacacatt ctgggcgtat tccccattta
     1441 tgtgttggct tttatttata ttattactta tctgtagatt agcttaagta agatttaaac
     1501 atccaattat gtttatctac tgatgtttgc atacctataa acatatcttc tgatacatca
     1561 tcgccagcat taccagcaat ttcaatcgct ttttctaatt gttttgagat atttgtgaaa
     1621 tcttgagata attcttcaac catttgttct gcagagtaac ctttcgcagc ttctttaaca
     1681 attgattgct ctaagcattc agttaatgta cctacagggt ttcctcctac cgctaaaatt
     1741 ctttcagcta attcgtctac atattggctt gcttcattat ataattcttc aaatttaacg
     1801 tgtaatgaga agaagttagg ccctttcaca taccagtgga aattatgtag ctttgtgtat
     1861 gctactgtcc agtttgctac ttgttgattc aattctttta caacatcttg ttgattactc
     1921 atatttaata cactccttaa a
//
LOCUS       DAKPJH010000202         1912 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.205, whole genome shotgun sequence.
ACCESSION   DAKPJH010000202 DAKPJH010000000
VERSION     DAKPJH010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.205"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..782)
                     /locus_tag="OY092_002696"
     CDS             complement(<1..782)
                     /locus_tag="OY092_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HCX1077563.1"
                     /translation="MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHF
                     AHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYV
                     IELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
                     HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQY
                     IKYCRWQNSVLEPTLSAMYQLQLTDQEVVHNYGYIFPEQIYI"
     gene            complement(903..1622)
                     /gene="mecA"
                     /locus_tag="OY092_002697"
     CDS             complement(903..1622)
                     /gene="mecA"
                     /locus_tag="OY092_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HCX1077564.1"
                     /translation="MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSM
                     MDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQEL
                     LAQTLEGEDQLEELFEQRTKEKDAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
                     NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYA
                     KIIMSHNVTAQVRRYFPETTE"
BASE COUNT          620 a          340 c          227 g          725 t
ORIGIN      
        1 tcaatataaa tttgctctgg aaaaatataa ccataattgt gcactacttc ttgatcagtt
       61 aactgtaatt gatacattgc acttaaagtg ggttctaaaa cggaattttg ccagcgacaa
      121 tatttgatat attgattaat tgcgaacttt gataatttat aaacagcatg ataatcacaa
      181 ggcgcctcat taaacaactc aataattttg gcattccttt tttcagcaac atatttgtgc
      241 ccgcctaaat attgtatttg ttgaaacatc attatttgtt ttttctctaa attgaacgta
      301 tgaagttttc gagtgattgg attaataaac aaactttgaa aatgattgaa cttcacttta
      361 ttatgacaat aatcaacatc atttaataac caacttactt tatatcccat tttctttaaa
      421 ccttccgttc gttgaagaat ctgtttataa ggaattggcg aatactgtag ctcaataaca
      481 tatttattat taatcaaaat atccggaatt tgttttattt cttttaaaaa tggctctatc
      541 tctactttac atccttgttg ctgtatcatc tgtgctaaaa tcaatttact tttataatgt
      601 ttaatcgttt cattattaaa acatttttgt tccgctaaat gtttatgtgc aaaatgacta
      661 attactttga gcccacgctt taaaataact tgcttgccac acaccggaca aaaatattgt
      721 gtctttctca atgcagtagt tgctaacaca cgttcctttt cttcatttaa agctactaac
      781 atatcttcac ctcaaaatat tacacgtaag tttaactact attacttttt cagcttttga
      841 aatcaataaa aaaagagact ccaaagagtc ccctttcata gtgcgttgct taattaatat
      901 cgttattcag ttgtctctgg aaaataacgt cgaacttgag ctgttacgtt atgactcata
      961 attattttag catagtcatt taaataaact tctgttctgt ctgttggata agcaaattca
     1021 agcaattgac tgtaactatc attaatgact tcttgatcaa catgactatc aaaatgtaca
     1081 gcataataat aagtaccatc aaccatatat aacaaatctt caaactctgt agttattgga
     1141 ttgctatgat atgcataatt aataacatct tctaaatcgt taaatttcac aataattgtt
     1201 cttgtatttt tacgtgctga agacttttga cgtttagaac cttgagcgtc tttttctttt
     1261 gttcgttgct cgaataattc ttctaattga tcttcacctt ctaatgtttg agctaacaat
     1321 tcttgaactt gttcatcaaa ttgatcagtt gcatcatcat cagacatatt catcatatct
     1381 tcatttttag atttagaaat tgtgacttcg acaccttttt caaaggcatg tacttgaatc
     1441 cataatggac cttctacaac aaaatcttct tcttcgttaa tttcatccat cattgaccaa
     1501 aagaattctt cgccacgttt gcgatttgtc cataaatctt cacgactaaa tccacgggcc
     1561 tcgatatcgc tatatgttat aaacaatttt acagttgtat catctactcg ttctattctc
     1621 atatcatctc actccttaca gtcgatgaat agtatccaca ttgtattaaa gcatcaaaca
     1681 aaatacaatt tatttgtttg atttctttct ctaaaatatt ttggtaactt ataataacat
     1741 attcgttgta gcaaaactat ttaaatgatt tatacagtta aagcattaaa gcactttctt
     1801 aatttaattt taccttatca tagcaaatgt ttcatccaaa acactctaat atagagctat
     1861 attaacaatt gcacatttga tttaaaagat actaagcaat tattgtaaaa tt
//
LOCUS       DAKPJH010000203         1911 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.206, whole genome shotgun sequence.
ACCESSION   DAKPJH010000203 DAKPJH010000000
VERSION     DAKPJH010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.206"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..125
                     /locus_tag="OY092_002698"
     CDS             <1..125
                     /locus_tag="OY092_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="superantigen-like protein"
                     /protein_id="HCX1077565.1"
                     /translation="TGDDNNYTIDLSKRLPSTDANKYVKNPQNAKIEVTLEKSN"
     gene            235..951
                     /locus_tag="OY092_002699"
     CDS             235..951
                     /locus_tag="OY092_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL12"
                     /protein_id="HCX1077566.1"
                     /translation="MKKNITNKIILTATLLILGTSSAQLPNTPIGFSSEAKAYHIGQD
                     ETNINELIKYYTQKPLTFSNRWLYQYDDGNIYVEFKRYSWSAHIRLWGAESWGNINQL
                     RDRYVDVFGLKDKDTRRLWWVYTDTFTGGVTPAASSSDKPYNIYVQYKDKLQTFIGAH
                     KIYQGNKPVLTLKEIDFRVRESLIKNKILYNENRNKGNIHITGGGNNFTIDLSKRLHS
                     DLANVYVKNPQKITVEVLID"
     gene            complement(1345..1569)
                     /locus_tag="OY092_002700"
     CDS             complement(1345..1569)
                     /locus_tag="OY092_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077567.1"
                     /translation="MLIEERGLKMKELNEIINAIQFLFESESGYKISKNSGVPYQTVQ
                     DLRNGKTKIEDARFRTIIKLYSYYATLKEQ"
     gene            complement(1526..1672)
                     /locus_tag="OY092_002701"
     CDS             complement(1526..1672)
                     /locus_tag="OY092_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077568.1"
                     /translation="MKLFYIAFLIIIWLNIFLGNEIIHTLTVLITTLYIVNRRKRIKN
                     ERVE"
BASE COUNT          668 a          319 c          264 g          660 t
ORIGIN      
        1 ttactggtga cgataataat tacacaattg atttaagtaa gagattaccg tcaactgacg
       61 caaataaata tgttaaaaat cctcaaaatg ccaaaattga agttaccctc gaaaaatcta
      121 actagtatcg aaatcggagt caacaaataa taatctcatt cattatattg acgccgctca
      181 cttttatatt tgatattcct cgcaatgata aatccacaga aaggagatgt tcaaatgaaa
      241 aagaacatca cgaacaaaat aatattaaca gcaacattgt taatattagg tacttcttca
      301 gctcaacttc ctaacacacc aatcggtttt tcatctgaag ctaaagctta tcatattggc
      361 caagacgaaa cgaacatcaa tgaattaatc aaatattaca cacaaaagcc tctcacattt
      421 tcaaatagat ggttatacca atatgatgac ggcaacattt atgttgaatt taagcgttat
      481 tcttggtctg cacatatacg cttatggggt gctgaaagtt ggggcaacat taatcaatta
      541 agagaccgct atgtagacgt gtttggttta aaagacaaag acactagacg attatggtgg
      601 gtatatactg atacatttac aggtggtgtt acacctgcag catcgtcttc tgataagcct
      661 tataatattt atgtacaata taaagataaa ctacaaacat ttatcggcgc acataagata
      721 tatcaaggta acaaaccagt tttaacgtta aaagaaattg atttccgagt acgtgaatca
      781 ttaataaaaa ataaaatact atataatgaa aatcgcaata aaggtaatat tcatattacc
      841 ggtggtggta ataactttac aattgattta agtaaaagat tacattctga tcttgcaaat
      901 gtttatgtta aaaatcctca aaaaataaca gtcgaagtcc tcattgatta aataaggtag
      961 tatgatttat atcgaaaata ctaaggataa acaataattg agtaatacta caaaatgtat
     1021 caataatatt tacacaatat ttaaattagt acacagaata ttaaatggga tttggagtct
     1081 aatagaaatg caaaatcatt ctctgtgttg ggggccgctc caacttgcat tgtctgtaga
     1141 atttcttttt gaaattctct gtgttggggc ccatccccaa cttgcacatt attgtaagct
     1201 gacttttcgt cagcttctgt gttggggccc caccccataa ttgaaaaatg tttgttacat
     1261 gggcattttt gtttggtcaa tatttgtcta tataatattg tagagcctaa gacgtggtta
     1321 cgttttaggc tcttaattca attattactg ctcttttaat gtagcataat aactatatag
     1381 ttttataatc gttctaaatc tagcatcttc tattttcgtt ttaccattcc tcaaatcttg
     1441 cacggtctga tacggcaccc ctgaattttt cgatattttg tagcctgatt cagactcaaa
     1501 caaaaattga atagcgttta ttatttcatt caactctttc atttttaatc ctctttcttc
     1561 tattaacaat atacaatgtt gttattaaaa cagtcagtgt atggatgatt tcatttccta
     1621 aaaatatatt cagccatata ataattagaa atgcaatata aaatagtttc attataatcc
     1681 cctatcattt ttatatttat cactttccat ttagtttcaa cattaaaagc taacctaggt
     1741 ttaagattat cttataacgc ctataactag aagtctgcat tttatcttgt atataacatt
     1801 ttataatgtt acactacacc tttttatatt tttcacaaga agttttcacg aattattata
     1861 tttaaactca cccatattcc aacacaatta atttttctct attcataatt g
//
LOCUS       DAKPJH010000204         1882 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.207, whole genome shotgun sequence.
ACCESSION   DAKPJH010000204 DAKPJH010000000
VERSION     DAKPJH010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.207"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            165..>1882
                     /gene="cna"
                     /locus_tag="OY092_002702"
     CDS             165..>1882
                     /gene="cna"
                     /locus_tag="OY092_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001039417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen adhesin Cna"
                     /protein_id="HCX1077569.1"
                     /translation="MNKNVLKFMVFIMLLNIITPLFNKNDAFAARDISSTNVTDLTVS
                     PSKIEDGGKTTVKMTFDDKNGKIQNGDTIKVAWPTSGTVKIEGYSKTVPLTVKGEQVG
                     QAVITPDGATITFNDKVEKLSDVSGFAEFEVQGRNLTQTNTSDDKVATITSGNKSTNV
                     TVHKSEAGTSSVFYYKTGDMLPEDTTHVRWFLNINNEKRYVSKDITIKDQIQGGQQLD
                     LSTLNINVTGTHSNYYSGSNAITDFEKAFPGSKITVDNTKNTIDVTIPQGYGSYNSFS
                     INYKTKITNEQQKEFVNNSQAWYQEHGKEEVNGKSFNHTVHNINANAGIEGTVKGELK
                     VLKQDKDTKAPIANVKFKLSKKDGSVVKDNQKEIEIITDANGIANIKALPSGDYILKE
                     IEAPAPYTFDKDKEYPFTMKDTDNQGYFTTIENAKAIEKTKDVSAQKVWEGSQKVKPT
                     IYFKLYKQDDNQNTTPVDKAEIKKLEDGTTKVTWSNLPENDKNGKAIKYLVKEVNAQG
                     EDTTPEGYTKKENGLVVTNTEKPIETTSISGEKVWDDKDNQDGKRPEKVSVNLLANGE
                     KVKTVDV"
BASE COUNT          782 a          237 c          360 g          503 t
ORIGIN      
        1 tacaagttaa cttcatgcac ttgtattcgt tatactgtat atattttgca taataaaata
       61 ataatatgaa tttttgataa attccattga ataagaacta aattagttta taatttatca
      121 ttagtatcct atggatatga catagattat aaggaggggt ttttatgaac aagaatgtgt
      181 tgaagtttat ggtctttata atgttattaa atatcatcac gcctttattt aataaaaatg
      241 acgcatttgc agcacgagat atttcatcaa cgaatgttac agatttaact gtatcaccgt
      301 ctaagataga agatggtggt aaaacgacag taaaaatgac attcgacgat aaaaatggaa
      361 aaatacaaaa tggtgacacg attaaagtgg catggccgac aagcggtaca gtaaagatag
      421 agggttatag taaaacagta ccattaactg ttaaaggtga acaggtgggt caagcagtta
      481 ttacaccaga cggagcaaca attacattca atgataaagt agaaaaatta agtgatgttt
      541 cgggatttgc agaatttgaa gtacaaggaa gaaatttaac gcaaacaaat acttcagatg
      601 acaaagtagc tacgataaca tctgggaata aatcaacgaa tgttacggtt cataaaagtg
      661 aagcgggaac aagtagtgtt ttctattata aaactggaga catgctgcca gaagatacga
      721 cacatgtacg atggttttta aatattaata atgaaaaaag atatgtatcg aaagatataa
      781 ctataaagga tcagattcaa ggtggacagc agttagattt aagcacatta aacattaatg
      841 tgacaggtac acatagcaat tattatagtg gatcaaatgc aattactgat tttgaaaaag
      901 cttttccagg ttctaaaata actgttgata atacgaagaa cacaattgat gtaacaattc
      961 cacaaggcta tgggtcatat aatagttttt caattaacta caaaaccaaa attacgaatg
     1021 aacagcaaaa agagtttgtt aataattcac aagcttggta tcaagagcat ggtaaggaag
     1081 aagtgaacgg gaaatcattt aatcatactg tgcacaatat taatgctaat gctggtattg
     1141 aaggtactgt aaaaggtgaa ttaaaagttt taaaacagga taaagatacc aaggctccta
     1201 tagctaatgt aaaatttaaa ctttctaaaa aagatggatc agttgtaaag gacaatcaaa
     1261 aagaaattga gattataaca gatgcaaacg gtattgctaa tattaaagcg ttgcctagtg
     1321 gagactatat tttaaaagaa atagaggcgc cagcaccgta tacatttgat aaggataaag
     1381 aatatccgtt tactatgaaa gatacagata atcagggata ttttacgact attgaaaatg
     1441 caaaagcgat agaaaaaaca aaagatgttt ctgctcaaaa ggtttgggaa ggatctcaaa
     1501 aagtgaaacc aacgatttat ttcaagttgt acaaacaaga tgacaatcaa aacacaacac
     1561 cagtagacaa agcagagatt aaaaaattag aagatggaac gacaaaagtg acatggtcta
     1621 atcttccaga aaatgacaaa aatggcaagg ctattaaata tttagttaaa gaagtaaatg
     1681 ctcaaggtga agatacaaca ccagaaggat atactaaaaa agaaaatggt ttagtggtta
     1741 ctaatactga aaaaccaatt gaaacaacat caattagcgg tgaaaaagta tgggacgaca
     1801 aagacaatca agatggtaag agaccagaaa aagtcagtgt gaatttattg gctaatggag
     1861 agaaagtaaa aacggtagat gt
//
LOCUS       DAKPJH010000205         1869 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.208, whole genome shotgun sequence.
ACCESSION   DAKPJH010000205 DAKPJH010000000
VERSION     DAKPJH010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.208"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            59..409
                     /locus_tag="OY092_002703"
     CDS             59..409
                     /locus_tag="OY092_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN family protein"
                     /protein_id="HCX1077570.1"
                     /translation="MKIKKYIVAGTLAVLLSTTAVSTLNGNKAEASSYDNYLTQSKYH
                     DKKIAEELKSLLRQSNVYDLAAGSLNRYYKRTIMMNEYRAKAALKKNDFKSMAEAKVG
                     LENIYKEIDEIINR"
     gene            complement(662..847)
                     /locus_tag="OY092_002704"
     CDS             complement(662..847)
                     /locus_tag="OY092_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077571.1"
                     /translation="MNKHINKKTTKHLEDYKKVQQRNSEETNRGCLKSVAMLIVLFLF
                     IIFGIVACSTHVNFFFQ"
     gene            complement(1464..1697)
                     /locus_tag="OY092_002705"
     CDS             complement(1464..1697)
                     /locus_tag="OY092_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000231333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077572.1"
                     /translation="MVFKDWKVNVVYTGKHEVVTNENNLFVIDEDYDVAIAINYIDNK
                     LKVSHVNYGSEFTIDSSNKVLELMIHNPNIDEN"
BASE COUNT          719 a          239 c          250 g          661 t
ORIGIN      
        1 actttcctaa aattgactat ataatcatta agtatcaatt tttaaaggag aatttacaat
       61 gaaaattaaa aaatatatag tagcaggaac attagcagta ctattatcaa caacagcagt
      121 atcaacgtta aacgggaaca aagcagaagc aagtagttat gacaattatt taactcaaag
      181 taaatatcac gataaaaaaa ttgctgaaga gttgaaatca ctacttagac aatcgaacgt
      241 atatgacttg gctgcaggta gcttaaatcg atattacaaa cgtacgatta tgatgaatga
      301 atatagagca aaagcagcac taaagaaaaa tgatttcaaa tcaatggctg aagctaaagt
      361 tggattagaa aacatttaca aagaaattga tgaaattata aatagataat aaagaaaaca
      421 ggttgagaca ataaatatca ttgtcttcgc ctgtttttta atttgtatag ttaaaaattc
      481 tacaatttaa tatttatgta tgagcaatga atatacaata ataggggaga ctaatacaaa
      541 tataatagtt agaaatgtta tgcacaaaat tgctttgtac aatctaaaaa atatttataa
      601 tgctcccata gataaaatca aatgctgtaa gaaacgtagt gaatattact caatcagcat
      661 attattggaa gaaaaagtta acgtgtgtag aacatgccac aataccaaat ataatgaata
      721 aaaataagac gataagcatg gcgacacttt ttaaacaacc tctatttgtt tcttccgaat
      781 ttctttgttg aaccttttta taatcttcaa gatgctttgt ggtcttttta tttatatgtt
      841 tattcatgat gtttactcct taatctaaat gtaaattgca ttaaaatagt tgaaaacata
      901 ccttgaaata aagatataaa gctaaagttg agaagagtgt tattttaaat ttaagcaaaa
      961 ttaactgtaa ataagttaat ttgatgataa catgtttcgc ttatttttaa aattgatagt
     1021 ttttaaactg acgcattaaa atattaatga aacactagaa cacataaatg aataataaag
     1081 gtgcgcagta tagaattatt aatgcaacac taagtataaa tattgttaac tgtaaactat
     1141 ctttagtttt aatataaaca attaagataa gcagtgttaa aagaaccata tatattaatg
     1201 acgaagatgt ccatacaaaa tctgcgtctg tcgtagttaa cagcggtact ataattagtc
     1261 cgaagttaat catgcatgct atatatacaa tgatgttata cacaatgtta atttttggtc
     1321 accaccttag ctgttatatt ttaaatgctt ggaaatcgtg catttttaag tgtaatgatt
     1381 atctgaatct ttgattaccg tttgtttttc gtttaaaaga ctatatatag tatgccttta
     1441 tatttctaaa tgttttttaa tatttaattc tcgtcaatat ttggattatg aatcatcaat
     1501 tcaagtactt tgttagatga gtcaattgta aattcagatc catagttaac atgactgacc
     1561 tttaatttat tgtctatata attgattgcg attgcgacat cataatcttc atctatgaca
     1621 aataaattat tttcatttgt aacaacttca tgtttcccag tgtaaacaac attaactttc
     1681 caatctttaa aaaccatttg tcatcctcct tgaacattta aactgattca atttaagttt
     1741 aacttattca tacaacttct tacaatatct agattagaga taaatagatt tctagaagtt
     1801 attttcaatt atatgtactt attatacttt ttatcttctt atttcagtat agttttaaaa
     1861 cgattttaa
//
LOCUS       DAKPJH010000206         1857 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.209, whole genome shotgun sequence.
ACCESSION   DAKPJH010000206 DAKPJH010000000
VERSION     DAKPJH010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.209"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            89..336
                     /locus_tag="OY092_002706"
                     /pseudo
     CDS             89..336
                     /locus_tag="OY092_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239616.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
     gene            658..837
                     /locus_tag="OY092_002707"
     CDS             658..837
                     /locus_tag="OY092_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077573.1"
                     /translation="MKFKTTKECKSNNIFKRSQEINNRESEKGCLWGISMLILLFLLI
                     LFGITACSSSIHFIN"
     gene            1148..1408
                     /locus_tag="OY092_002708"
     CDS             1148..1408
                     /locus_tag="OY092_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077574.1"
                     /translation="MCIVIYLIYSLIVYFICIINFFIMAAPFLMTNADYVWTPMTTVT
                     LFILSLIIFLIFIKTKDVVHLTIFILNLLFSILYCLPILFYL"
     gene            complement(1461..1811)
                     /gene="scn"
                     /locus_tag="OY092_002709"
     CDS             complement(1461..1811)
                     /gene="scn"
                     /locus_tag="OY092_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN-A"
                     /protein_id="HCX1077575.1"
                     /translation="MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNE
                     KLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQ
                     KIYNEIDEALKSKY"
BASE COUNT          635 a          230 c          243 g          749 t
ORIGIN      
        1 atataaattc gatttaataa ttaatttaat tttagttaat caattttgtg actattttat
       61 tgtaagctat ataaaaggag tgataatgat ggtgaaaaaa acaaaatcca attcactaaa
      121 aaaagttgca acacttgcat tagcaaattt attattagtt ggtgcactta ctgacaatag
      181 tgccaaagca gaaactaaga aagatgatac tgatttaaaa ttagtcagtc ataacgttta
      241 tatgttatcg accgttttgt atccaaactg gagactttta acataaaatt acttatcatt
      301 caaaaagtaa aacagcataa tatcaaggtt tataacttta tcattatcaa taatacctca
      361 tataaaataa aattttaggg actttttagg gactttaaat ttaaaattac aagtttaata
      421 gaaacatcaa aataatcaca tgtttgtgtg gaatgtacac cccaaaagct agactgaaaa
      481 atctattttt tgaggtgtat ttttataggt aaatataata aattagagta gacaactcag
      541 aattccaatt ttataataat attgcttgac atatcaaact agatagtact attttgaata
      601 tattattata atcaaaaatt cattgtaaac ttttagacaa aaggaagtaa taaaaacgtg
      661 aaatttaaaa caactaaaga atgtaaaagt aataatatct ttaaaagaag tcaagaaatt
      721 aataatagag aaagtgaaaa gggttgttta tggggcatta gcatgttgat tctacttttc
      781 ttattgattc tgtttggaat aactgcttgt tcatcaagca ttcactttat taattagatt
      841 tttttacttg gaggtatcat gtgaagaacc atacaaatat aattaatatc ttattagtta
      901 tagtcaactc attaactcat tttctaactc taaacacctc attttttaat aattcagcat
      961 cggatttctg ttttatcata ggggctatat ttttcttaat cggaattttt gttgcaatat
     1021 acggtatgaa gcgagcaaca tattggttaa acttattgat tttatttacc aatatttttt
     1081 attttctaca cttctgtgtg ttacttttgt taaaatatat aggatttaaa ttatttattt
     1141 atgaagggtg tgtattgtta tttatctaat ttatagtcta attgtctatt tcatctgcat
     1201 tataaatttt ttcataatgg ctgcaccatt cttaatgact aatgctgatt atgtatggac
     1261 gcctatgact acagttacgt tatttatttt gagtttgatt attttcttga tatttataaa
     1321 aacaaaagat gtcgttcatt taacaatttt catattaaac ttactttttt caatacttta
     1381 ttgtttgcct atactgtttt atttatgaac acttttatat tatctagaaa attaaaacca
     1441 cccgtaaaag ggtggttttt ttaatattta ctttttagtg cttcgtcaat ttcgttataa
     1501 atcttttgaa gttgatattt tgcttctgac attttcttaa agtcttttga cttaagagca
     1561 tacattgctt tttgacctga aatttttata gttcgcttat aataagtgtt taaacttcca
     1621 gtagctaatt cattaacatt tagttcatct aataacgatt ttaattcatt agctaacttt
     1681 tcgttttgat attcattcga tgttggcaag cttgtgctag cttgtgcctc atttttatct
     1741 agattagtta ctagtggtga tgctaaaacg attgctaaag ttcccgcaag tatagatttt
     1801 ctaattttca ttttttattc tccttagtaa ttagtactaa tttattttaa tgactaa
//
LOCUS       DAKPJH010000207         1835 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.210, whole genome shotgun sequence.
ACCESSION   DAKPJH010000207 DAKPJH010000000
VERSION     DAKPJH010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.210"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            69..1130
                     /locus_tag="OY092_002710"
     CDS             69..1130
                     /locus_tag="OY092_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HCX1077576.1"
                     /translation="MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISK
                     DKQYLITDFRYIDQATKQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDT
                     YLELNKSRISLISISNTVDKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEK
                     ELKAILESKMLELGADGPSFDTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNG
                     YCSDITRTFAIGEPDPKLKEIYQIVLESQMKAINEIRPGMTGAEADAISRNYLESKGY
                     GKEFGHSLGHGIGLEIHEGPMLARTIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILI
                     TENGCQVFTKCTKDLIVLT"
     gene            1156..1713
                     /gene="efp"
                     /locus_tag="OY092_002711"
     CDS             1156..1713
                     /gene="efp"
                     /locus_tag="OY092_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HCX1077577.1"
                     /translation="MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNL
                     RTGAIQEKTFRAGEKVEPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEEL
                     NYLKEGMEVQIQTYEGETIGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTL
                     NVPLFVNEGDVLIINTGDGSYISRG"
BASE COUNT          692 a          240 c          351 g          552 t
ORIGIN      
        1 tccttattat gatattattt taatgtataa agttgaaatg cacaaacgtt tcactaggag
       61 gtcataagat gagcagaata acacaagtac atcgtatttt agaacaaaaa catttagatg
      121 caataatcat actttcagat tacaatagaa gatatttgtc aggatttact gggactagcg
      181 gtgcgctaat catatctaaa gataaacaat atttgataac agactttaga tatattgatc
      241 aagcaactaa gcaggcgcca aattatgaaa ttattaatcg taaatctact attattggtg
      301 agattaaaga attgctacac caagaaaatt ttgaaaatgt aggttttgag gggcaccatg
      361 taagttatga tacatacctt gaattaaata aaagccgtat atcattaata agcatttcta
      421 atactgtaga taaaattaga gacgtcaaag atgctgacga aattgcttta attcaaaaag
      481 cagctaatat tgttgatgaa acatatgaat atattttaac tgttgtaaaa gcaggtatga
      541 ctgaaaaaga attaaaggca atattagaaa gtaaaatgct agaattagga gcagatggac
      601 catcattcga tacgattgta gcatctggtc atagaggtgc attaccacat ggtgttgcaa
      661 gtgataaaat tattgaaaaa ggcgacatga ttacattaga ttttggcgcg tattataacg
      721 gctattgttc agatattact agaacatttg ctattggaga accagatcct aaactgaaag
      781 aaatatatca aatagtactt gaatctcaaa tgaaagcaat taatgagatt agacctggca
      841 tgactggtgc agaagctgat gccatttcaa gaaactattt agagtcaaaa gggtatggaa
      901 aagaatttgg acattcacta ggacatggta ttggtttaga aatccatgaa gggccaatgc
      961 tggctcgtac gatacaagat aaacttcaag ttaacaactg tgttacagta gaacctggtg
     1021 tttatataga aggtttgggc ggtataagaa tagaagatga tattttaatt acagaaaatg
     1081 gttgtcaagt ctttactaaa tgcacaaaag accttatagt tttaacataa gcgtgtaaaa
     1141 tgaggaggaa actgaatgat ttcggttaat gattttaaaa caggtttaac aatttctgtt
     1201 gataacgcta tttggaaagt tatagacttc caacatgtaa agcctggtaa aggttcagca
     1261 ttcgttcgtt caaaattacg taatttaaga actggtgcaa ttcaagagaa aacgtttaga
     1321 gctggtgaaa aagttgaacc agcaatgatt gaaaatcgtc gcatgcaata tttatatgct
     1381 gacggagata atcatgtatt tatggataat gaaagctttg aacaaacaga actttcaagt
     1441 gattacttaa aagaagaatt gaattactta aaagaaggta tggaagtaca aattcaaaca
     1501 tacgaaggtg aaactatcgg tgttgaatta cctaaaactg ttgaattaac agtaactgaa
     1561 acagaacctg gtattaaagg tgatactgca actggtgcta ctaaatcggc aactgttgaa
     1621 acaggttata cattaaatgt acctttattt gtaaacgaag gtgacgtttt aattatcaac
     1681 actggtgatg gaagctacat ttcaagagga taatctctaa tttgttaaca aatagcttgt
     1741 atacactata ctgatttaac gtaagatatt ccaaataagt ctcataaagc tattgcctaa
     1801 aatgattata ggttatatgc tgatatgagg ctttt
//
LOCUS       DAKPJH010000208         1760 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.211, whole genome shotgun sequence.
ACCESSION   DAKPJH010000208 DAKPJH010000000
VERSION     DAKPJH010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.211"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(75..470)
                     /gene="spxA"
                     /locus_tag="OY092_002712"
     CDS             complement(75..470)
                     /gene="spxA"
                     /locus_tag="OY092_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HCX1077578.1"
                     /translation="MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQ
                     ILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYSIIQDNPGLLRRPIILDNKRLQ
                     VGYNDDEIRRFLPRKVRTFQLQEAQRMVD"
     gene            765..1754
                     /gene="trpS"
                     /locus_tag="OY092_002713"
     CDS             765..1754
                     /gene="trpS"
                     /locus_tag="OY092_002713"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HCX1077579.1"
                     /translation="METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHA
                     ITMPQDRLKLRKQTRQLAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGEL
                     ERMTQYKDKAQKAVEGIPAGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVD
                     RFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNTKNFISLLDEPNVAAKKI
                     KSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEI
                     VKAFLVEFQEKYESFYNSDKLDDILDQGRDKAHKVSFKTVKKMEKAMGLGRKR"
BASE COUNT          642 a          259 c          292 g          567 t
ORIGIN      
        1 aaaaaagcaa cactatagaa atagtgttgc ttgacatatc ttttagtaaa gtatgacaca
       61 tagttaaatg gttattagtc aaccatacgt tgtgcttctt gtaattggaa cgtacgaact
      121 tttctaggta agaaacgtcg aatctcgtca tcattataac caacttgtag tcgtttatta
      181 tctaaaataa ttggacgacg taataagcca ggattatctt gaatgattga atataagtct
      241 tgtaatggta gtgaatcaat atcaacattt aatttttggt atgttttaga acgtgtagaa
      301 atgatttcat cagtaccgtc ttcagtcatt tttaatattt gcttaatttc atcaattgtt
      361 aaatgttcag aaaaaatatt acgctccgta tacggaatgt catgttcttg taaccatgct
      421 ttcgctttac ggcaagatgt gcaacttggt gaagtaaata atgttaccat acatctcact
      481 ctcctatttg aatgaataaa attcattgct taaaatttag ttatagatca agaaaaaaca
      541 tttttttcta aaattcttaa tcgttactat ttattataac tatctaacat taaaattaaa
      601 tgagaaaaac ctaatttttc agataagttt ctacacttat aaaaaagatt attaatccct
      661 ttgttagtag taagttatac gtatattcta acacatctta catttttaag aaatactgtt
      721 ataatgataa ttattaaaat attactaaga aagtaggcat ttaaatggag acattatttt
      781 caggcatcca acctagtgga attcctacta ttggaaatta tattggcgca ctaaaacaat
      841 ttgttgatgt gcaaaatgac tatgattgtt atttctgtat cgtagatcaa catgcaatta
      901 caatgccaca agatcgctta aaattacgta aacaaactag acaattagca gcgatttatt
      961 tagcttctgg tatagatcca gacaaagcaa cattgttcat acaatctgaa gtccctgcac
     1021 acgtacaagc aggatggatg ttaactacga ttgcttctgt tggagaatta gagcgtatga
     1081 cgcaatacaa agataaagct cagaaagcag ttgaaggtat accagctggt ctattaacat
     1141 atccaccttt aatggcagct gatattgttc tttacaatac taatatcgtt ccagttggcg
     1201 atgaccaaaa gcagcatatc gaattgactc gtaaccttgt agatagattt aatagtcgct
     1261 ataatgatgt gcttgtgaaa cctgaaattc gtatgcctaa agttggtgga cgtgtcatga
     1321 gtttacaaga cccaacaaga aaaatgagta agagtgatga taatactaaa aacttcattt
     1381 cattattaga cgaaccaaat gttgctgcta aaaaaattaa aagtgctgtg actgattcag
     1441 acggtattat taaattcgac cgcgacaata aaccaggtat tacaaattta atttcaatat
     1501 acgctggatt aacagacatg cctattaaag atattgaggc aaaatatgaa ggtgaaggtt
     1561 acggtaaatt taaaggcgac cttgctgaaa tagttaaagc atttttagta gaattccaag
     1621 aaaaatacga aagtttctat aactcagata aacttgatga tattttagat caaggtagag
     1681 ataaagcaca caaagtttca tttaaaactg tcaaaaaaat ggaaaaagcg atgggtttag
     1741 gacgtaagag ataaaataag
//
LOCUS       DAKPJH010000209         1744 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.212, whole genome shotgun sequence.
ACCESSION   DAKPJH010000209 DAKPJH010000000
VERSION     DAKPJH010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.212"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..650
                     /locus_tag="OY092_002714"
     CDS             <1..650
                     /locus_tag="OY092_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077580.1"
                     /translation="INAENYYDPSKKITKGMKNNYHKFTDSFSDFVEMVDDITWRIRD
                     SFDYIGGLKNKEFNEDENEYIEQLIQFVILSKFGYMNVENHFDYIENLNTLNNELTTI
                     LKSEFAHISNDMYNNLFSNLFDVVNTWKKDYSNNFYNNTQNTITTEKLDIISRFIKQY
                     DKPVDRDKHGKRVKAEVFEGISDFHRRVKEGFDNNDVLLQLRLEMSVHENDKFTS"
     gene            722..1654
                     /locus_tag="OY092_002715"
     CDS             722..1654
                     /locus_tag="OY092_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077581.1"
                     /translation="MDLKKFEELYKDYNDDDVIEQFAIYKIKDEKQVMEITDKKLTSE
                     DKQVFQRIANLSYQFNVVKEMYDYYLYDFQVITDYIKDKRNLNNKFKSVDFVNLYFLH
                     FLSTARTFYQYTENLFKSIGKKEFEKWKNNISNIYDNNFSYRLCYQMRNFTQHHGLAI
                     TNIKEKLNLDSNGKEINDYQLFIDPSILLNTNYNWKNSIKSDLENHNGLIDFYQLIID
                     YDKCIKDILLYSYIGLIDKYSTELNQLMTKAMAIEGEAGIPFLRKAKKKELREYYKNI
                     EFTELQGSKAINDIFNMMCDLYTQLNTSKICFNR"
BASE COUNT          756 a          158 c          260 g          570 t
ORIGIN      
        1 atatcaatgc tgaaaattac tatgacccta gcaaaaaaat aacaaaagga atgaaaaata
       61 attatcataa atttacagat tcattcagtg attttgtaga aatggtggac gatataacat
      121 ggagaatccg tgattcattt gattatattg gaggattaaa aaacaaagaa tttaacgaag
      181 atgagaatga atatatcgaa caattaattc aatttgttat attatctaaa ttcggctata
      241 tgaatgtaga aaatcacttt gattatattg agaacttaaa tacgcttaat aatgaattaa
      301 cgactatatt aaaaagtgag ttcgcgcaca tttcaaatga tatgtataat aatttattca
      361 gtaatttgtt tgatgttgta aatacatgga aaaaggatta ttcaaataac ttttataata
      421 atactcagaa tactataact acagaaaagt tagacataat atctcgattt ataaaacaat
      481 atgataaacc agttgaccga gacaaacatg gtaaacgagt taaagcagaa gtgtttgaag
      541 gtataagtga ttttcatagg cgtgtaaaag aaggatttga taataatgat gtgctattac
      601 aattaagatt agaaatgagc gtacatgaaa atgataaatt tactagttaa gtaatgggga
      661 ttttttgtaa aatctaattc aaaagcaata taaatattta aatataaaaa aggggtaagt
      721 tatggactta aaaaaatttg aagaactata taaagattat aatgatgatg atgtaataga
      781 acaatttgcc atatataaaa taaaagatga aaagcaagta atggaaatta ctgataaaaa
      841 gctaaccagt gaagataaac aagtttttca gagaatagct aatttaagtt atcaatttaa
      901 tgtagtaaag gaaatgtatg attactatct ttatgatttt caagtaatta ctgattatat
      961 caaagataaa agaaacctaa ataataagtt taaatctgtt gactttgtca acctatattt
     1021 tttacatttc ttatctactg caaggacttt ttatcaatat actgaaaatt tatttaagtc
     1081 tataggtaag aaagaatttg agaaatggaa aaataatata tcaaatattt atgataataa
     1141 tttttcttat agattatgtt atcaaatgag gaattttaca cagcatcatg gtttggcaat
     1201 tacgaatatt aaagagaaat taaatttaga ttctaatggt aaagaaataa atgactatca
     1261 attgttcatt gatccatcta tattactaaa tactaactat aattggaaga attcaattaa
     1321 gagcgattta gaaaatcata atggattaat tgatttttat caattaataa tagattatga
     1381 caagtgtata aaagatatac ttttgtattc atatataggg ttaatagata agtatagcac
     1441 tgaattaaac caattaatga caaaagctat ggcaatagaa ggagaggcag gtataccttt
     1501 tttaagaaaa gctaaaaaga aagaacttag agaatattat aaaaatattg aatttacgga
     1561 attacaagga agtaaagcaa taaatgatat atttaatatg atgtgtgatt tatatactca
     1621 actcaataca tctaaaattt gtttcaatag atgaatatat ttaaactgag taaaagatga
     1681 atagataaat ggaccaatta gcaaaataac agattacaag tctaataata ttaaaatatt
     1741 gtga
//
LOCUS       DAKPJH010000210         1741 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.213, whole genome shotgun sequence.
ACCESSION   DAKPJH010000210 DAKPJH010000000
VERSION     DAKPJH010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.213"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(200..1261)
                     /locus_tag="OY092_002716"
     CDS             complement(200..1261)
                     /locus_tag="OY092_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HCX1077582.1"
                     /translation="MSNAKNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSG
                     NEILELTYQLVILIQSFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSF
                     MLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRK
                     ITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLG
                     IVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAY
                     VLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAYIVHELC
                     KKFIPIYSNDIYKFEVPKQ"
BASE COUNT          682 a          291 c          205 g          563 t
ORIGIN      
        1 tagtgtttta taaatgtatt tttatcaata taaagaaaag cttcttttta aaagactgta
       61 cttaaaaaat cgtctattat acgcgaacaa ttctttcatt ataaaatcaa tcaaaaaaag
      121 cgctactatc aatatcttat tgacagtaac gcctatattt atcatatatt aaaacttatt
      181 cttgtcatca agctataaat tattgttttg gaacttcaaa tttataaata tcattagaat
      241 atataggaat gaatttttta cacaattcat gaacaatata tgccgataca aatggtatga
      301 caaaataacc aagtgctaat aaaataatat tcattgttgg atcacctgac attcggttaa
      361 atgcatttat tgggccaact aatcctgtgt atccaaatcc agcagacaat ggtgttcctt
      421 taacctgaag aacgtaagca atgattccag taattattcc atttatagtc aatggtatcg
      481 aaataattaa atttttcaag taaactggga tcatcatttt tgcagctcct atgagtaaaa
      541 ctgcatttac accaatagaa ttgacacgca atgagccaaa taagaaagta acacaggcag
      601 ccactatacc taggtttgct gctccacttc ctagtccgtt taaactaatc gcagttgcaa
      661 tcgctactaa cgatattggt gttaccatta ataatgaaaa tgccacacta ataagtatag
      721 acattaacaa cggatttaag tctgtaaaag aatgaattac atttccaatt gcttgagtaa
      781 tttttcgaat gtaaggtaat gtgattagac cgataccccc actaacgata ggtactaaaa
      841 ctggtaatat aattaattca aaagatccaa gtttgttttg taataccata tatataagac
      901 atgcaataat aacaaccaaa ctcgtattta taatgtcacc tatacctttt aacataaaac
      961 tattattgct atatacaaca gcacctgaac caatcatagc tgatgtacct actatagcag
     1021 cacctgcgcc attaaattta aattgatgag cagctaaaac cccaataata aatgccataa
     1081 atgattgaat tagtatcact aactgatacg ttaattctaa aatttcatta ccacttttaa
     1141 atatttttaa tacttcacct aataaagcat tcggaacaag tgcaataaca acaccagcac
     1201 caatagaatt taaaatctta ctgaaaaact gcttattatc agcattcttt gcgttactca
     1261 taaacgacct ccaatttgaa cattaaactc atcatattat agaaaattaa ctttaacaat
     1321 gattagttga ctaatttaat ctaaatataa caaaccacaa aaggaataaa gtaaatttga
     1381 aaatctactc actaatcaat gtcatgttaa ttttaaaata ttactaatta catcctgtga
     1441 ctaataatgt aataaattgt aaatattaaa atatccatat tggcattaag atagataaat
     1501 tgaatcgact tgctataaag cacaataaaa tagaactttt acaaatattt tattagaaaa
     1561 gtttaaacaa atacataacc ccagataata tagtcattat cattaatgta ataccaaaaa
     1621 aagaagttaa acaatctata gttgcttaac ttcctatatt gaactcatca gtacaatttg
     1681 acatagatcc tattaaagcc tgtgccattt gagagccact tttatttgta ttgtataaag
     1741 a
//
LOCUS       DAKPJH010000211         1740 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.214, whole genome shotgun sequence.
ACCESSION   DAKPJH010000211 DAKPJH010000000
VERSION     DAKPJH010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.214"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(125..223)
                     /locus_tag="OY092_002717"
                     /pseudo
     CDS             complement(125..223)
                     /locus_tag="OY092_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429703.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="head morphogenesis protein"
     gene            complement(199..306)
                     /locus_tag="OY092_002718"
     CDS             complement(199..306)
                     /locus_tag="OY092_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077583.1"
                     /translation="MCPKRADDILKASMEYQSTDYKRRYISWKTMIAMK"
     gene            complement(381..1667)
                     /gene="ltrA"
                     /locus_tag="OY092_002719"
     CDS             complement(381..1667)
                     /gene="ltrA"
                     /locus_tag="OY092_002719"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HCX1077584.1"
                     /translation="MYRESPSMMELVVREHNIQKAIKKVKKNKGAPGIDGMKVSEIQG
                     HFAQYFPKIKQKLLEGTYKPQAVKKVEIPKANGKKRVLGIPVVRDRVIQQAIKQVIEP
                     SIDRTFSKHSHGFRPNRSTGTALKECASYYEAGYTIAVDCDLKQCFDNINHDKLMYLF
                     ERHIKDKAVSTFIRRRLQVGAIDLSGEVAERKIGAPQGGVISPLLCNIYLHELDKELE
                     KRNHRFVRYADDFVIFVKTKRAGERVMDSIKTFIHKTLKLEVNNDKSKVGSPTRLKFL
                     SCLMSKVNGTYRFRPTTEAKRNLKRNLKWLTRRSRPGSFQDIITEINRVTRGWINYFG
                     KGFIKRFLKELEPWLNRRIRQLILKRWKKIKTKYKMLRKYGLDHDSAMRIASSRKKYW
                     RLSSTHEVHRALTTKRLRKWGLLSLTQLAETAYARY"
BASE COUNT          451 a          359 c          293 g          637 t
ORIGIN      
        1 attttattga tggatgctta aaaaatgtaa ataaatcata ttctgaaaat cctgactgtc
       61 caggatggtt atgtaacata acaattgaat tcggtttact gttaaataat aattcggttg
      121 cttgttaccc tggcacaaaa gatacactat cttgattgac atatactttt gtaaatttac
      181 catcttttaa caaataagct acttcattgc tatcattgtt ttccatgaga tatacctccg
      241 tttatagtct gtcgactgat attccatact tgcttttaaa atgtcatcag cacgttttgg
      301 acaaatcgag taggagaata atcattactt gattattcgt cctctcacac caccgagcgt
      361 acggttccgt actcggcggt tcaatatctt gcgtaagccg tctctgcgag ttgggttagt
      421 gataataacc cccacttgcg gagacgtttt gttgtaagtg cacgatgaac ctcatgcgta
      481 gatgataaac gccagtattt ctttcttgag ctcgcgattc tcattgcgct atcgtggtct
      541 agaccatact tgcgcaacat cttatatttt gttttaatct tcttccatct tttgagtatg
      601 agttgcctaa tgcggcgatt tagccaaggt tctaattctt taagaaatct ttttatgaat
      661 ccttttccaa aatagttaat ccatcctcgt gtcacacgat taatttctgt tataatatct
      721 tggaatgaac ctggtctact tcgtctggtt aaccacttta agttgcgttt taaatttctt
      781 tttgcttccg tagtgggtct gaaacgataa gtgccattta ctttgctcat tagacaactc
      841 aagaacttta aacgggtagg agaacccacc ttacttttat cattattgac ttcaagtttg
      901 agggttttgt gtatgaatgt tttaatacta tccatcacac gttcacctgc acgtttcgtc
      961 ttgacaaaga tgacgaagtc atctgcatat ctcacaaaac gatgattacg tttttcgagc
     1021 tctttatcca gttcatgtag atatatgtta cagagtaatg gtgatatcac accaccttgc
     1081 ggtgcaccta tctttctttc tgcgacttcg ccagataggt caatggcacc aacttgtaac
     1141 cttctacgga taaatgtcga taccgcttta tctttaatgt ggcgctcaaa taaatacatg
     1201 agtttatcat gatttatgtt gtcaaagcat tgttttaaat cacaatctac ggctatcgtg
     1261 taacctgctt catagtaaga cgcacattct ttcagtgctg ttcctgtact acgattaggt
     1321 ctaaagccat gactgtgttt agagaaggta cgatcgatac taggttcaat cacttgttta
     1381 attgcttgtt gtatcactct gtctcttacg acaggtatac caagcacacg ctttttccca
     1441 tttgctttgg gaatttcaac tttcttaact gcttgaggtt tgtatgtacc ttcaagcagt
     1501 ttttgtttta tttttggaaa gtattgcgca aagtgacctt gtatttcact cactttcatg
     1561 ccatcaatgc caggggcacc tttattcttt ttaactttct taattgcctt ttgaatgttg
     1621 tgttctctta caacaagctc catcatcgat ggagactcac gatacatttc tttcatttca
     1681 cctaagattt accatgcgca cttatttacc ctttttcgtt ccactactta tctctctata
//
LOCUS       DAKPJH010000212         1653 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.215, whole genome shotgun sequence.
ACCESSION   DAKPJH010000212 DAKPJH010000000
VERSION     DAKPJH010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.215"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            290..1015
                     /locus_tag="OY092_002720"
     CDS             290..1015
                     /locus_tag="OY092_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL14"
                     /protein_id="HCX1077585.1"
                     /translation="MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISEN
                     ETNINELIKYYTQPHFSLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGAESWGNINQL
                     RDKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKSYKLFLKYSDKQQTIIGGL
                     EFYKGNKPVLTLKELDFRIRQTLINNKKLYNGEFNKGQIKITGGGNNYTIDLSKKLKL
                     TDTNRYVKNPRHAEIEVILEKSN"
     gene            1088..>1653
                     /locus_tag="OY092_002721"
     CDS             1088..>1653
                     /locus_tag="OY092_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein"
                     /protein_id="HCX1077586.1"
                     /translation="MKKNITKKIILSSALLLLGAVSTQLPNTPISSKSEAKAYYINQE
                     ETNVSELIKYYTQQHLTFSNKWLWQKDNGTIHATLLQISWYSHIQVFGPESWGNINQL
                     RDKYVDIFGIKDQETIDSYALSQETFTGGVTPAAKPNDKHYKLNVTYKDKDETFIGGY
                     PFYTGNKPVLTLKEVDFRIRQTLIKNKK"
BASE COUNT          649 a          244 c          247 g          513 t
ORIGIN      
        1 taagtactac atttaaagta taactaattt tcaagtagtt agaaaattca attatcaaac
       61 aatttaatgc aattgattag agaataattt taacgtgtcg tttttaatat ataactctcg
      121 cctactttat taggtactgt ttctgtccaa aaattaaaaa tgataagttt tgcttaaata
      181 acactactaa ctgtttaagt ttatttaaca tagttttagc ttttatttaa ttccgaatcg
      241 gtgtaaaagc ttatatactt tgggtaattc acgcaaagga gattttcata tgaaaaagaa
      301 catcatgaat aaattagttt tatcaacagc attgttactt ttaggaacca catcaacaca
      361 acttcctaaa acgccaatca gtttttcatc tgaagcaaaa gcctataata tcagtgaaaa
      421 cgagactaat atcaatgaac taatcaaata ttacactcag ccgcattttt cattatctgg
      481 aaaatggcta tggcaaaagc ccaatggtag cattcatgca acattgcaaa cgtgggtttg
      541 gtatagtcat attcaagtat ttggtgctga aagttgggga aacattaatc agttaagaga
      601 taaatacgtt gatatattcg gaactaaaga tgaggataca gttgaaggtt actggactta
      661 tgatgaaaca tttacaggtg gtgtaacacc tgcagctaca tcatccgata agtcttataa
      721 attattttta aaatatagcg ataaacagca gactatcatc ggtggtctcg aattttacaa
      781 aggaaataaa ccagtattaa ctttaaaaga actagatttc cgtatccggc aaacattaat
      841 aaataataaa aagctatata acggagaatt taataaaggt caaattaaga ttacgggtgg
      901 cggtaataat tatacgattg atttaagtaa gaagttaaaa ttaactgaca caaaccgtta
      961 tgttaaaaat cctcgacatg cagaaattga agtcattctt gaaaaatcta attaacctta
     1021 attgcggagt aaatactaaa attatttaag taacccttat ttataaaaaa tacaaggagc
     1081 attttaaatg aaaaaaaaca ttacgaaaaa aattatttta tcatcagcgt tgttactatt
     1141 aggcgctgta tcaacacaac ttcctaacac accaatcagt tctaaatctg aagctaaagc
     1201 ttattatatt aatcaagagg aaacaaatgt aagtgagtta atcaagtatt acactcagca
     1261 acatttaacc ttttcaaata aatggttatg gcaaaaagat aatggcacaa ttcatgcaac
     1321 gttacttcag atatcatggt atagccatat tcaagtattt ggccctgaaa gttggggtaa
     1381 tattaatcaa ttaagagata aatatgtaga tattttcggc ataaaagacc aagaaactat
     1441 tgactcatat gcactatctc aagaaacatt tactggtggc gttacacctg cagcaaaacc
     1501 taacgataaa cactataaat tgaatgtaac atataaagat aaagatgaaa catttattgg
     1561 tggatatcca ttttatacag gtaataagcc agttttaact ttaaaagaag ttgatttccg
     1621 tatccgacaa acattaatta aaaacaaaaa att
//
LOCUS       DAKPJH010000213         1622 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.216, whole genome shotgun sequence.
ACCESSION   DAKPJH010000213 DAKPJH010000000
VERSION     DAKPJH010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.216"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..1133
                     /gene="scpA"
                     /locus_tag="OY092_002722"
     CDS             <1..1133
                     /gene="scpA"
                     /locus_tag="OY092_002722"
                     /EC_number="3.4.22.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cysteine protease staphopain A"
                     /protein_id="HCX1077587.1"
                     /translation="LIISLSITPIANAESNSNIKAKDKKHVQVNVEDKSVPTDVRNLA
                     QKDYLSYVTSLDKIYNKEKASYTLGEPFKIYKFNKKSDGNYYFPVLNTEGNIDYIVTI
                     SPKVTKDSSSSSKYTINVSSFLSKALNQYKDQQITILTNSKGYYVVTQNHKAKLVLKT
                     PRLEDKKVKKTESIPTGNNVTQLKQKASVTMPTSQFKSNNYTYNEQYVNKLENFKIRE
                     TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTGLTPREMIYFG
                     QTQGRNPQLLNRMTTYNEVDNLTKNNKGIAILGSRVESRNGMHAGHAMVVVGNAKLDN
                     GQEVIIIWNPWDNGFMTQDAKNNVIPVSNGDHYRWYSSIYGY"
     gene            1164..1490
                     /locus_tag="OY092_002723"
     CDS             1164..1490
                     /locus_tag="OY092_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin A"
                     /protein_id="HCX1077588.1"
                     /translation="MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILS
                     TSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMT
                     FIKHKS"
BASE COUNT          643 a          232 c          247 g          500 t
ORIGIN      
        1 gtttaataat ttctttaagt attaccccta ttgcaaacgc cgagagcaat tcaaatatca
       61 aagcaaaaga taagaagcat gtgcaagtta atgtcgagga caagagtgtt cctactgacg
      121 tacgtaattt agcgcaaaaa gactatcttt cttatgttac ttcacttgat aaaatctata
      181 ataaagagaa agcctcgtat acacttggtg aaccttttaa aatttacaaa ttcaacaaaa
      241 agagtgatgg taattattat tttcctgttt tgaacactga aggtaatatc gattatatag
      301 ttacaatttc accaaaagtc actaaggatt ctagttcatc ttctaaatac acaatcaatg
      361 tttcttcatt tttatctaaa gccttaaatc aatataaaga tcaacaaatt actattttga
      421 caaactcaaa aggttactat gtggttactc aaaatcataa agcaaaatta gtactaaaaa
      481 caccacgtct agaagataaa aaggtaaaaa agaccgagag tatacctact ggcaataatg
      541 taacgcaact aaagcaaaaa gcttctgtca ctatgccaac tagtcaattt aaaagtaata
      601 attatactta caacgagcaa tatgtaaata aacttgagaa tttcaagata agagaaactc
      661 aaggtaacaa tggttggtgt gcaggctata cgatgtctgc attactaaat gcaacttata
      721 atactaacaa atatcatgca gaagctgtga tgagattttt acacccaaac ttacaaggac
      781 aacaattcca atttactggt ttaacgccaa gagagatgat ttattttgga caaactcagg
      841 gaagaaatcc acaacttctt aatagaatga ctacatataa tgaagttgac aatcttacta
      901 aaaataataa aggaattgct attttaggta gtagagtaga atcaagaaat ggtatgcacg
      961 cagggcatgc catggtagtt gttgggaatg ctaaattaga caatggacaa gaggttataa
     1021 ttatatggaa tccatgggat aatggtttta tgactcaaga tgctaaaaac aatgttattc
     1081 cagtatccaa tggcgaccat tatcgatggt attcatctat ttatggttat taaaatttgt
     1141 attttagaaa ggtaaataat attatggaac aaattgaatt atttagtatt gataaattca
     1201 aatgtaattc agaggctaag tattatctta atattattga gggagaatgg catcctcaag
     1261 atttaaatga tagtccttta aaatttattc tcagtacctc agacgattct gattacattt
     1321 gcaaatatat aaatacagaa cacaaacaac tcacattata taataaaaat aatagctcaa
     1381 ttgttattga aatatttata ccaaatgata ataaaatact actaacaatt atgaacacag
     1441 aagctttggg aacttctcct agaatgactt tcattaagca taagtcataa gactatctag
     1501 atatgattaa gtaaactatt aatcttatta aaggtctcta ggaagaaaaa atttcatgcg
     1561 atgagattgt tttagaaaaa gcgacgatat atataattta acaatgattt taaaatatta
     1621 ag
//
LOCUS       DAKPJH010000214         1603 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.217, whole genome shotgun sequence.
ACCESSION   DAKPJH010000214 DAKPJH010000000
VERSION     DAKPJH010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.217"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(1..1225)
                     /locus_tag="OY092_002724"
                     /pseudo
     CDS             complement(1..1225)
                     /locus_tag="OY092_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500668.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
BASE COUNT          531 a          336 c          220 g          516 t
ORIGIN      
        1 ctttaatttt accaatgata gattttaaac cgtcacgcat gtttccgaag atattacgta
       61 ctttatccca caaacgacca gctataccta ccgtgttatc tttaatagag ttccagatgt
      121 ttgacatcca atttcttaac ttagtaaata tatctttcgt cgcattccat aaacttgtga
      181 atttagacct tacacccgta aataacgaat gagccttgcc gacggtattg cttttgatat
      241 tattccacgt actagataac cagtttttca tattagtgaa aatagattta acactattgt
      301 ataagaaacc gaaaatactt ttcgttgcat tccaaattgc agataatgat tttgtgaaaa
      361 tacctttgat aacaccccag ataccggata ttaaaccttt aagcaatcca ccaaagtatc
      421 taacaacacc tagaatctta cctacaaacc acagttgtat taaattccaa attaactgca
      481 cagtgccttt tagtatcatc acaataccgt cccaaacgcc tcgccagtta ccagtgaata
      541 aacttgaaaa gaacttaata aagccaagta tgatatttaa agcaccttgt attactcctt
      601 ttatattctc ccaagtactg acaatcaagg ctttaaccgc tggccaaata aattgcatca
      661 cttgccaaat cgcaaacatg attggtttaa ttacaaaatt taaaataaat tcaaatatcg
      721 ctttaataaa gttgcatata ttttgaagcg cttgaacaat agaaattccg ttttcattaa
      781 agaatccatt aatttgactc caaatatctt tagcgaaatc aacgattgct gaaaccgctt
      841 gtttaaagat gtttttaacg gaatcaatga aaggttggat aaattgaatg aaattactaa
      901 acgtttgttt aacactgtta attgcaccat taacaaaatt tctgaatgtt tcagatttct
      961 tataagctat tgtaaatgcg actgctaaac cagccagtac acctaacacg ataccaattg
     1021 gaccagttaa tgctgtgaag actgttccta aaataggtac tttagttgat aaaaaactaa
     1081 tcaatccgtc agcctttgca atactagcta ataatggagc taatacagtt actgcgttgc
     1141 caactgtgct tatgaatgca cctaatccaa aaactacagg accaattgca gcagcaatac
     1201 caccgaatat aacaatcgac cttttagatc catcacttaa acttgaaaac caatcaaccg
     1261 ctatagatag ctttttgatt agttcttcca ttactggagc aaacgcactt tcaatagaag
     1321 cccatacatc agcacctact aatttaagtt tattcattgc tactttaaat ctttcggagc
     1381 cactttcaga atctttaaat gtttgattga ccgttccttg cgaatcttcg atagttttta
     1441 agaactcttg gtaactaaag cgaccgcctt taatagcatc tgctaaatca ggacctgctt
     1501 ttgcaccaaa tgcttcaatc gctaaacttg ttgcgctagc tatatccggt gtcctttcaa
     1561 tttctgctaa tgtcttctta aattcttctc ttgggtcttt acc
//
LOCUS       DAKPJH010000215         1603 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.218, whole genome shotgun sequence.
ACCESSION   DAKPJH010000215 DAKPJH010000000
VERSION     DAKPJH010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.218"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>1603)
                     /locus_tag="OY092_002725"
     CDS             complement(<1..>1603)
                     /locus_tag="OY092_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCX1077589.1"
                     /translation="GKNPREEFKKTLAEIEKTPDIASATSLAIEAFGAKAGPDLADAI
                     KGGRFSYQEFLKTIEDSQGTVNQTFKDSESGSERFKVAMNKLKLVGADVWTSIESAFA
                     PVMEELIKKLSIAVDWFSNLSDGSKRSIVIFSGIAAAIGPVVFGLGAFISTIGNAVTV
                     LAPLLASIAKAGGLISFLSTKVPILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSE
                     TFRNFVNGAIESVKQTFSNFIQFIQPFVDSVKNIFKQAISAIVDFAKDIWSQINGFFN
                     ENGISIVQALQNICNFIKAIFEFILNFVIKPIMFAIWQVMQFIWPAVKALIVSTWENI
                     KGVIQGALNIILGFIKFFSSLFTGNWRGVWDGIVMILKGTVQLIWNLIQLWFVGKILG
                     VVRYFGGLLKGLITIIWVAIIGVFKKSLSAIWNATKSIFGFLFNSVKSIFTNMKNWLS
                     NTWSSIRTNTIGKAQSLFSGVKSKFTNLWNATKEIFSNLRNWMSNIWNSIKDNTVGIA
                     SRLWSKVRGIFTNMRDGLSSIIDKIK"
BASE COUNT          549 a          324 c          194 g          536 t
ORIGIN      
        1 ttttaatctt atctataatg gaactcaagc catcgcgcat atttgtgaaa attccacgta
       61 ccttactcca taaacggctt gcaattccta ccgtattatc tttaatggaa ttccaaatat
      121 ttgacatcca atttcttaaa ttactaaaaa tttctttcgt cgcattccat aaattagtaa
      181 attttgattt gacgccacta aataatgact gcgcttttcc tattgtattc gtacggatac
      241 tgctccaagt attagataac caatttttca tatttgtgaa aattgatttt acgctattaa
      301 ataaaaatcc aaaaatactt tttgttgcat tccaaattgc cgataatgat ttcttgaaaa
      361 cgcctattat agcaacccat ataatagtta ttaaaccttt aagtaatcca ccaaagtatc
      421 tcactacacc tagaatttta cctacaaacc acagttgtat taaattccaa attaactgca
      481 cagtaccttt cagtatcatt acaataccgt cccaaacacc tcgccaatta ccagtgaata
      541 aacttgaaaa gaacttaata aagccaagta ttatatttaa agcaccttgt attactcctt
      601 ttatattctc ccaagtactg acaatcaagg ctttaaccgc cggccaaata aattgcatca
      661 cttgccaaat cgcaaacatg attggtttaa ttacaaaatt taaaataaat tcaaatatcg
      721 ctttaataaa gttgcatata ttttgaagtg cttgaacaat ggaaattccg ttttcattaa
      781 agaatccatt gatttgactc caaatatctt ttgcgaaatc aactattgct gatatcgctt
      841 gtttaaagat gtttttaaca gaatcaacga aaggttgaat aaattgaata aaattactaa
      901 atgtttgttt aacactttca attgcaccat taacaaaatt tctaaatgtt tcagatttct
      961 tataagcaat tgtaaatgcg actgctaaac cagccaatac acctaataca atgccaattg
     1021 gaccagttaa agctgtgaag acagttccta atataggtac tttagtcgat aaaaaactaa
     1081 tcaatccacc agcctttgca atactagcta acaatggagc taatacagtt actgcattgc
     1141 caattgtact tataaatgca cctaatccaa aaactacagg accaattgca gcagcaatac
     1201 cactgaaaat aacaattgat cttttagaac catcacttaa attggaaaac caatcaaccg
     1261 ctatagatag ctttttgatt aattcttcca ttacgggagc aaacgcactt tcaatagaag
     1321 tccatacatc agcacctact aattttaatt tattcattgc tactttaaat ctttcggagc
     1381 cactttcaga atctttaaac gtttgattta ctgtgccttg ggaatcttcg atagttttta
     1441 aaaattcttg ataactaaaa cgaccacctt taatagcatc tgctaaatca ggacctgctt
     1501 ttgcaccaaa tgcttcaatc gctaaacttg ttgcgctagc tatatccggc gtcttttcaa
     1561 tttctgctaa tgtcttctta aattcttctc ttggattttt acc
//
LOCUS       DAKPJH010000216         1578 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.219, whole genome shotgun sequence.
ACCESSION   DAKPJH010000216 DAKPJH010000000
VERSION     DAKPJH010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.219"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(75..260)
                     /locus_tag="OY092_002726"
     CDS             complement(75..260)
                     /locus_tag="OY092_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077590.1"
                     /translation="MLSNKRVEKEAGCEHKKFLKKLLTLNSKVDNMIKSSKTTQLFLK
                     KNFKSVKLTIEITIKTI"
     gene            complement(349..1413)
                     /locus_tag="OY092_002727"
     CDS             complement(349..1413)
                     /locus_tag="OY092_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HCX1077591.1"
                     /translation="MLTVDQVKELVGEIKDPIIDVPLKETEGIVEVSIKEEKEHVSVK
                     LAMAQLGGAPQLDLQMAVVNVLKENGAKTVGIRFETLPEEKVNQFKPKEENKPKTIEG
                     LLSQNNPVEFIAIASGKGGVGKSTVAVNLAVALAREGKKVGLVDADIYGFSVPDMMGI
                     DEKPGIKGKEVIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFTEVKWGDIE
                     YLILDLPPGTGDVALDVHTMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTDHSILGVI
                     ENMSYFESKETGNKEYVFGKGGGTKLADELNTQLLGELPLEQPSWNPKDFAPSIYQSD
                     DRLGKIYSSIAQKVIAATNK"
BASE COUNT          477 a          321 c          194 g          586 t
ORIGIN      
        1 atgttcaatc tcttttattc tacttcattt gtttcttgaa gtcaataact ttttgaacga
       61 ttactttatt tattctatat tgtttttata gttatttcaa tggtaagttt tacacttttg
      121 aaattcttct ttaaaaacaa ctgcgtcgtt tttgacgact ttatcatatt atcaactttg
      181 gaatttaaag tcaataactt ttttaaaaac tttttgtgtt cacaacccgc ttctttttca
      241 acgcgtttat tgcttaacac aagaacttat tttaccagca ttccaaaaca aatcaacata
      301 aaaacgtaca aaataaaagt aattttgtac gtttagcata tattatacct atttatttgt
      361 agcagctata actttttgtg caatcgagct ataaatttta cctagacgat catctgattg
      421 atatattgac ggtgcaaaat cttttggatt ccaagatggt tgctctaaag gtaattcccc
      481 aagtaattga gtattaagtt catcagctaa cttagtaccg ccacctttgc caaagacata
      541 ttctttatta cccgtctctt tactttcaaa ataactcatg ttttcaatta cgccaagaat
      601 agaatgatcc gtatgttttg ccatcgcacc tgcgcgagct gcaacaaatg ctgctgtagg
      661 atgaggtgtc gttacaataa tttccttact tgaaggtaac atcgtatgaa catctaaagc
      721 tacatctcct gttccaggtg gaagatcgag tattaaatat tcaatgtctc cccatttaac
      781 ttctgtaaag aaattcgtca acattttacc taacattggc cctctccata taactggcgc
      841 attttcttcc acaaaaaagg ccattgatat aactttaacg ccatgacgtt caactggaat
      901 tacttccttc cctttaattc caggtttttc atcaataccc atcatatctg gtacactaaa
      961 tccatatata tcggcatcta ctaatccgac ttttttccct tcacgggcta aggcaacggc
     1021 taaatttact gcaacagtgg atttaccgac gccaccttta cctgaagcaa tagcaataaa
     1081 ttcgactgga ttattttgag ataataagcc ttctatcgtt ttaggtttat tttcttcttt
     1141 tggtttaaat tgatttactt tttcttccgg caatgtttca aatcgtatac cgaccgtttt
     1201 cgcaccgttt tcttttaata cgttaacaac agccatttgt aaatctaatt gcggtgcacc
     1261 acctaattgt gccattgcta atttaacact cacatgttct ttttcttcct taatagaaac
     1321 ttcaacaata ccttctgttt cttttaaagg cacatctata atagggtctt taatttctcc
     1381 taccaattct ttcacttgat ctaccgttaa caaagcaaat cccccttaat cattttaaga
     1441 catctacatc atagcaaata acaatttttg cttagtctat cactaaaagt ataaaacttt
     1501 ttattaaata aaaaaagaag ttagcctatt attttcaata gaccaactac tataattatt
     1561 ttaaaatttc cttctatt
//
LOCUS       DAKPJH010000217         1569 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.220, whole genome shotgun sequence.
ACCESSION   DAKPJH010000217 DAKPJH010000000
VERSION     DAKPJH010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.220"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            338..838
                     /locus_tag="OY092_002728"
     CDS             338..838
                     /locus_tag="OY092_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HCX1077592.1"
                     /translation="MTFEEKLSEMYNEIANEISSMIPVEWEKVYAIAYVDDQGGEVVF
                     NYTKPGSDELNYYTNISRGYNVSEEIFDDLWMNLYYLFKNLRNLFKEEGLEPWTSCEF
                     DFTRDGKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVLPEMEYEMEEIKEIEQYIKE
                     QDEAEL"
     gene            849..1337
                     /locus_tag="OY092_002729"
     CDS             849..1337
                     /locus_tag="OY092_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001008490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HCX1077593.1"
                     /translation="MTFEEKLSQMYNEIANEISSMIPVEWEKVYVIAYVDDGGGEVIF
                     NYTKPGSDELNYYTYIPREYNVSEKVFYDLWTDLYRLFKKLRNAFKEEGLEPWTSCEF
                     DFARDGKLNVSFDYIDWVNTEFDQLGRENYYMYKKFGVLPETEYEMEEIRAVEKYVKE
                     QE"
BASE COUNT          598 a          152 c          326 g          493 t
ORIGIN      
        1 tggtttagaa agcggatcta aattttaata atgattaatg aaaggtagat gaacatgagt
       61 aactcaaacg gtttgttaaa tttgtccctt catttatttg cgttgaacat cacgaggctg
      121 tttccatttt cgaaaaatgg aaacgagtat tgtaagtaaa aactctgaag aatctaagga
      181 gattatatag tttcaagatg atgaaccaat ttaggatgaa aatttaaatg gatggatata
      241 tttagatctt actgaattgt aaaaatagaa tttcaagtta tttgaatgta tttataaata
      301 tatcgttatt attaaagtag agattagggg cgataacatg actttcgaag aaaaattaag
      361 tgaaatgtac aatgaaattg cgaatgagat tagcagtatg ataccagtag agtgggaaaa
      421 ggtatatgca attgcctatg tagatgatca aggtggagag gtcgttttta attatacaaa
      481 accaggtagt gatgaattga attattacac gaatatatct agaggttata atgtttcgga
      541 agaaatattt gatgatttat ggatgaatct gtattacttg tttaagaatt taaggaattt
      601 atttaaagaa gaaggactcg aaccatggac atcatgcgaa tttgacttta caagagacgg
      661 caaattgaaa gtatcatttg attatataga ttggattaat acagagtttg atcaattggg
      721 ccgtgaaaat tactatatgt acaaaaagtt tggtgtttta ccagaaatgg aatacgagat
      781 ggaagaaatt aaagaaatcg agcaatatat taaagagcaa gatgaagctg aactataggg
      841 gagataatat gactttcgaa gaaaaactaa gtcaaatgta caacgagatt gcgaatgaga
      901 ttagcagcat gataccagta gagtgggaaa aggtatatgt aattgcctat gtagatgatg
      961 gaggtggaga ggtcattttt aattatacta aaccaggtag cgatgaattg aattattaca
     1021 catatatccc tagagagtat aatgtctctg aaaaagtatt ttatgatttg tggacggatt
     1081 tatatagatt gtttaagaag ttaagaaatg catttaaaga agaaggactt gaaccatgga
     1141 catcatgtga atttgacttt gcaagagatg gcaaattaaa tgtatctttt gattatattg
     1201 attgggtaaa tacagagttt gatcaattgg gccgtgaaaa ctattatatg tataaaaagt
     1261 ttggtgtttt accagaaacg gaatatgaaa tggaagaaat tcgagcagta gagaagtatg
     1321 ttaaagagca agagtagcag acatgttata aaaggctgtg caaaaccaac cttgttttac
     1381 atttgactca aagaagaagg taaaagataa gattatttgc aacttaaaaa gtcaattagt
     1441 ttatcggtat ccatacatca tggataaatg agttcaacta attaacaaat tacgatataa
     1501 atttaaaatt gtcattaatt gaaaaggtta ttgtagtgta ttttataaag ttgatgtaca
     1561 tcgacttat
//
LOCUS       DAKPJH010000218         1564 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.221, whole genome shotgun sequence.
ACCESSION   DAKPJH010000218 DAKPJH010000000
VERSION     DAKPJH010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.221"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            154..360
                     /locus_tag="OY092_002730"
     CDS             154..360
                     /locus_tag="OY092_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077594.1"
                     /translation="MNEIETIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGKTKI
                     KEAKFKTIIKLYEYQRTLENKTEC"
     gene            1061..1171
                     /locus_tag="OY092_002731"
     CDS             1061..1171
                     /locus_tag="OY092_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077595.1"
                     /translation="MKMTIKVRKTNKKEKIEFLIGTFIIILVILGFKIMK"
BASE COUNT          653 a          141 c          233 g          537 t
ORIGIN      
        1 aattttatca atatataaaa aaaacgccaa tactattagg tattagttta tgaattaact
       61 agtttggcaa ctagaaaaaa acaatgtatt gctaaacgta gttactgcat taggattatt
      121 ataattataa atagaaagag agtgtgatta ataatgaatg agattgaaac tattataagt
      181 gaaatagaaa agttattaac taacaataca ccatatagta tttcaaaaaa ctcaggtgta
      241 ccacgtcaaa cagttactga tttaaaggta ggtaaaacta aaataaaaga agctaaattt
      301 aaaacgataa tcaagttata tgaatatcaa agaacattag aaaataaaac agaatgttaa
      361 caaaaatatt ttgttaggtt aggtggacaa gaaattaaat ttctaatgat ttcatggttg
      421 tctgtccacg ttttgtccac ctcaataaga taatctctta gttttagaaa ttgtacatgg
      481 ttaaataatc aaaaatgcat attatgaaat tatcattgcc attaaatctt gaatgatctt
      541 taagcgatga tataaaaggc tgaacacagt aaataagtta actttaatgc agtattctat
      601 actatacata ttttgtaata atgtttatgc acataatttt tcattgacaa ttttttatat
      661 taaattgtgt aattggcata tatgatgatt tgtgataatt atattgtaat atagcatttg
      721 gttttatgat tctaaaatta atagatttga aaagtatact ttatttcatg aaagtttttg
      781 gtacatttat ttgaaaatgt ttttattaca aagttacatg gctaaatgtt tcttaacaaa
      841 attaattttt cgagtgtaaa gaatcgtgtg gtaaacataa tttatataga ttataaggag
      901 gtgaaaatgg tcgaggaagt taaaacgata aaatagtttg aatgttttga tttcaattct
      961 ggtaggacta ttgaatttgc aatctaataa gaatgtgagg tttgatttaa tatgaagtca
     1021 tattctttga ataaaatatt actttctcac cattagtaaa atgaagatga ctattaaagt
     1081 gcgaaaaaca aataaaaaag agaaaataga atttttaata gggacgttta taattatttt
     1141 agtaatatta gggttcaaaa ttatgaaata aatgtatagt atttgagaag tctatatgac
     1201 tccggaaaaa ttaaattcta aagatatctc aatatctcaa atttaataga ctactggagt
     1261 tagtagtttg aatattgaaa gacactaatc taataaaaat acataaaagg ttaaacttta
     1321 gaagtggctg taaacttcaa tgaatactaa acattgaagt tttgtaaaag gcgtaaggta
     1381 tacaagacaa atcgtttatc tttgacaaag taattgatga tgaaaagtcg ttaatatgta
     1441 gaaacaaaaa ttgaaaatat aaaatttaac tattatgaag tgatgatagc cattaatgaa
     1501 tagaaaaata ataaaatcat ttatagataa aaaatacgtt aagttcacag aatttcgaaa
     1561 aaaa
//
LOCUS       DAKPJH010000219         1554 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.222, whole genome shotgun sequence.
ACCESSION   DAKPJH010000219 DAKPJH010000000
VERSION     DAKPJH010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.222"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..316)
                     /locus_tag="OY092_002732"
     CDS             complement(<1..316)
                     /locus_tag="OY092_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077596.1"
                     /translation="MGKFNRQEQLKQLHAERKVKTEQKVSKAINELVRKNEEINFNIV
                     AKHSNVSKATLYNNSKIRKRIEELREQSKDIFVHKNNSDGKDALISSLKRRVKSLENE
                     KKR"
     gene            complement(325..>1554)
                     /locus_tag="OY092_002733"
     CDS             complement(325..>1554)
                     /locus_tag="OY092_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCX1077597.1"
                     /translation="HIEAYIEFLFEYANSKNVQSSRNFVREELKAIRRFLNDIASQNY
                     DIAPSEDIRFLIYPQDFPKREKKNSSQIDYIPDFVLEQLFEHINDLHKDLIPVVWIAF
                     KTGLRISDVLTLKNNCLAKVNGKFSIITDIAKTFVKGHRIPIDNELADIVAVLIANSK
                     IKSTKDNNPNNYIFAIHKGKRKGMPFTQHMVRAHLNHLAKTKNILDEQGEVFHFKTHQ
                     FRHTYAVKLLNGGADILTIQELLAHSSPEMTLRYAKLLDDTKRKAFESVIDQGAFSFD
                     VDGKIKNIQHSSELSEKALNSLWQEHKLNAMDNPYGTCHARLSGDCPYMEAPPCLTCN
                     SGKPCKDLAIGFSDLDVEKYELHIKSTVKSIELAKNNNRQDIVEKHTNILNKYEEILG
                     NIKDGNIIFGRSNRIKV"
BASE COUNT          464 a          256 c          190 g          644 t
ORIGIN      
        1 gcctcttttt ctcattttct aaagatttta ctctcctttt taatgaagaa attaatgcgt
       61 ctttaccgtc actgttattt ttatgtacaa atatgtcttt actttgttca cgtaactctt
      121 cgattctctt tcgaatttta ctattattat ataaagtagc tttagataca tttgaatgct
      181 tagcaacaat attaaagtta atttcttcat tttttcgaac caattcattt attgctttag
      241 aaactttttg ctcggtttta acttttcgtt ctgcatgtaa ttgttttaat tgttcttgtc
      301 tattaaattt tcccatctta acctctatac ttttattcta ttacttctcc cgaatataat
      361 gtttccatct tttatattac ctaatatttc ttcatattta tttaatatat tagtatgttt
      421 ttcaactata tcttgtctat tattattttt agctaattct atggatttga ccgttgattt
      481 gatatgtaat tcatattttt caacatctaa atcagaaaat ccaatagcta gatccttaca
      541 tggtttccca gaattacaag ttaagcatgg cggagcttcc atatatggac aatcaccgct
      601 caatctagca tgacaagtac cataaggatt gtccattgcg tttaatttat gttcttgcca
      661 taaagaattc aatgcttttt ctgataattc actactatgc tgtatatttt taattttacc
      721 gtcaacatca aaactaaaag ccccttgatc aataactgat tcaaaagcct ttctttttgt
      781 atcatcaagt aacttagcat atctgagtgt catttctggt gaggaatgtg ctaataattc
      841 ttgtatggtt aatatatctg ctccaccatt taacaatttc actgcataag tatgtctaaa
      901 ctgatgagtt ttgaaatgga agacttcacc ttgttcatca agaatatttt ttgtttttgc
      961 taaatgattt aagtgtgctc tgaccatatg ctgtgtaaag ggcattcctt ttctttttcc
     1021 tttatgaata gcaaaaatat aattattagg gttgttatct tttgtacttt taattttaga
     1081 attggctatt aaaactgcta ctatatcagc taattcatta tcgattggta tcctatgtcc
     1141 tttaacaaaa gttttagcaa tatcagtaat tattgaaaac tttccattaa cttttgcaag
     1201 acaattattt tttaatgtta atacatcaga aattcttagt cctgttttaa aagctatcca
     1261 aactacaggt attaaatctt tgtgcaaatc atttatatgc tcaaaaagct gttccaatac
     1321 aaaatctggg atataatcaa tttggctact atttttcttt tcgcgcttag gaaagtcttg
     1381 aggataaatt aaaaaacgta tatcttcaga gggggctata tcataatttt gactagcaat
     1441 atcatttaag aaccttctaa ttgcttttaa ttcttctcta acgaagttcc tagaactttg
     1501 cacattttta ctattagcat attcaaataa aaattctata tatgcttcga tatg
//
LOCUS       DAKPJH010000220         1550 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.223, whole genome shotgun sequence.
ACCESSION   DAKPJH010000220 DAKPJH010000000
VERSION     DAKPJH010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.223"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            127..987
                     /gene="folD"
                     /locus_tag="OY092_002734"
     CDS             127..987
                     /gene="folD"
                     /locus_tag="OY092_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HCX1077598.1"
                     /translation="MVAKILDGKQIAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDG
                     ASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPK
                     QVSEQKILEAINPDKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKN
                     AVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKD
                     VVKEGAVIIDVGNTPDENGKLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLL
                     AEKMRRGIDS"
BASE COUNT          549 a          223 c          289 g          489 t
ORIGIN      
        1 ttctgctttt tcaatcaaaa atcgaacttt attttgattt tttgttcgaa tttacgtctt
       61 ttgctatgta aattagtttt ataaactaac aaagttagga tattgacaat aggaggagaa
      121 gtttttatgg ttgctaaaat tttagatggt aaacaaattg ccaaagacta cagacagggg
      181 ttacaagatc aagttgaagc gctaaaagaa aagggtttta cacctaaatt atccgttata
      241 ttagttggta atgatggcgc tagtcaaagt tatgttagat caaaaaagaa agcagctgaa
      301 aaaattggta tgatttcaga aatcgtacat ttggaagaaa cagctactga agaggaagta
      361 ttaaacgaac taaatagact aaataatgat gattctgtaa gtggtatttt ggtacaagta
      421 ccactaccaa aacaagttag cgaacagaaa atattagaag caatcaatcc tgataaagat
      481 gtggacggtt ttcatccaat aaatataggg aaattatata tcgatgaaca aacttttgta
      541 ccttgcacac cgctcggcat catggaaata ttaaaacatg ctgatattga tttagaaggt
      601 aaaaatgcag ttgtaattgg acgaagtcat attgtcggac aaccagtttc taagttacta
      661 cttcaaaaaa atgcatcagt aacaatctta cattctcgtt caaaggatat ggcatcatat
      721 ttaaaagatg ctgatgtcat tgtcagtgca gttggtaagc ctggtttagt aacaaaagat
      781 gtggtcaaag aaggagcagt aattatcgat gttggcaata cgccagatga aaatgggaaa
      841 ttaaaaggtg acgttgatta tgatgcggtt aaagaaattg ctggagctat tacaccagtt
      901 cctggtggcg ttggtccatt aacaattact atggtattaa ataatacttt gcttgcagaa
      961 aaaatgcgtc gaggtattga ttcgtaaatt cacattagtc atgtaatgtg aatgaataac
     1021 aagaaaaatc tgggacatta atcgatcaaa tgctcccttc aaagtagaca ttgaataaat
     1081 gaaggctttg aagggagcat ttcactttgt tcttggctca acaattttat atagacagtt
     1141 gttaattgaa tgaaaataag cttgtaacaa gcatttttca attatagtcc ggggccccaa
     1201 catagaagct ggcggaaagt cagcttacaa taatgtgcaa gttggggatg ggccccaaca
     1261 aagaggaatt ggatttccaa tttctacaga caatgcaagt cgacgaggcc ccatcacaga
     1321 agctgtgact atgataaagt actactacat aattaatcaa tagtggttct ttatcatttt
     1381 cgcctccctt ttcttattgt tttgatacac aaaaatttat gttcaaactg tcgaataaag
     1441 ttatatttga tttcaaatta tccctgaatt attaatttta caattgtggc agattttcaa
     1501 aataataatt atttcctcat tatttataaa tttatattta aatttcattc
//
LOCUS       DAKPJH010000221         1509 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.224, whole genome shotgun sequence.
ACCESSION   DAKPJH010000221 DAKPJH010000000
VERSION     DAKPJH010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.224"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            187..954
                     /locus_tag="OY092_002735"
     CDS             187..954
                     /locus_tag="OY092_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HCX1077599.1"
                     /translation="MRFVFDIDGTLCFDGRLIDQTIIDTLLQLQHDGHELIFASARPI
                     RGLLPVLPSVFHRHTLIGANGAMISQQSKISVIKPIHTDTYHHILKIIQKYELDFIID
                     DDWNYAAQLDAENAIFERLDPHKLASCIDVANIDTPIKVILLNIDPAQITTILDELNK
                     YHQELEMIHHSNEYNIDITAQNINKYTALQYIFDADVKYIAFGNDHNDIVMLQHASSG
                     YIIGPSEAYTHAILKLDKIKHINNNAQAICKVLKSYK"
     gene            complement(1003..1476)
                     /locus_tag="OY092_002736"
     CDS             complement(1003..1476)
                     /locus_tag="OY092_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HCX1077600.1"
                     /translation="MGLLDIASIRSIERGFNYYQSECVINLKSFSETQHEAEVKGSGN
                     KVYRCYIDMEHPRKSKCNCPHADGRRVICKHMIALLFTASPEAANKHIIMLNEVEEDY
                     HLRRNMWIDSLKEMINDMSEEELRDAYLNMLIEHGEMAELFGLDEEDEMFEDEFY"
BASE COUNT          509 a          264 c          212 g          524 t
ORIGIN      
        1 cgagttacac aaacatacag ttatataagt ccccttatgg aatttcacat tctagtttac
       61 ataatatata ttataggaag taatgtgtgt gacgcaaaag gtaccctaca tcataatcat
      121 tatctaatat cgtcacataa cttacttatg ctataatcat ggtattatat tgtttggagt
      181 gatttgatga gatttgtctt tgatattgat ggtacgcttt gttttgacgg ccgattaatt
      241 gatcagacta ttattgatac attgttacaa ttacaacatg atggtcatga acttatattt
      301 gcatcagcac gtccaattcg tggtttgttg ccagttttac catcagtatt tcatcggcac
      361 acattaattg gcgcaaatgg tgctatgatt tcacagcaat caaagatttc tgttatcaaa
      421 ccaattcata ctgatacata tcaccatatc ttaaaaataa ttcaaaagta tgagttagat
      481 tttattattg atgatgattg gaattatgct gcacaacttg acgctgagaa cgcgattttt
      541 gagcgtttag atccacataa gctggccagt tgtattgatg ttgcaaatat cgacacgcca
      601 atcaaagtta ttttattaaa tatagacccg gcacaaatta caactatatt agacgagcta
      661 aataaatacc atcaagaatt ggaaatgatt caccattcaa atgagtataa cattgatata
      721 acagcgcaaa atattaataa atatactgca ttacaatata tatttgatgc agatgttaaa
      781 tatatagcat ttggtaatga ccacaatgat attgtcatgt tacaacatgc tagtagtggc
      841 tatattatag gaccatcaga agcatacaca cacgcaatat tgaaacttga taaaatcaaa
      901 cacatcaata ataatgcaca agctatttgc aaagtcttaa aatcatataa ataaaaaaca
      961 cccctatcaa atgataatca ttatcaatcg ataggggcta ttttaataaa attcgtcctc
     1021 gaacatttcg tcctcttcat ctaatccaaa taattctgcc atttctccat gttcaattaa
     1081 catgtttaaa tatgcatcgc ggagttcttc ttcactcata tcattaatca tttctttaag
     1141 agaatcaatc cacatatttc tgcgtaagtg atagtcttct tcaacttcgt ttaacatgat
     1201 tatatgttta tttgctgctt ctggactagc tgtaaagagt aatgcaatca tatgtttaca
     1261 tatcactcgt cttccatcag catgaggaca attacatttg gattttctag gatgttccat
     1321 atcaatataa caacgatata ctttgttacc actgcctttt acttcagcct catgctgcgt
     1381 ttctgaaaat gattttaagt taatgacgca ttcactttga taataattaa agcctctttc
     1441 tatagaacga atacttgcaa tatcaagtaa tcccattaat gatactcctt tttattatta
     1501 tttttaaat
//
LOCUS       DAKPJH010000222         1502 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.225, whole genome shotgun sequence.
ACCESSION   DAKPJH010000222 DAKPJH010000000
VERSION     DAKPJH010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.225"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            305..1264
                     /gene="hyl"
                     /locus_tag="OY092_002737"
     CDS             305..1264
                     /gene="hyl"
                     /locus_tag="OY092_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hemolysin"
                     /protein_id="HCX1077601.1"
                     /translation="MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNT
                     IVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKILVIRTKGTIAGQYRVYSEEGANKS
                     GLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDSGKIGG
                     LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYG
                     NQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKATKQQSNIDVIYE
                     RVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN"
BASE COUNT          577 a          223 c          230 g          472 t
ORIGIN      
        1 aatacctagt tttaaagaaa ttaatcaata aaattagctt tgtcttttcc ttggttcata
       61 aagagttcat tcaactttga ctaagcctcg aaattgaaat gcttcctttc aaatattaat
      121 taaaagttaa aaacatattc ttaaaatatt cactcatcat cactcaatca tttaacagtt
      181 gctacattaa atatactaat ataaacgatg ataaatattt gatatgtctc aactgcatta
      241 ttctaaattg acatattgat tattgtttcc tcaaatcgtt ttaaaaaata gaaggatgat
      301 gaaaatgaaa acacgtatag tcagctcagt aacaacaaca ctattgctag gttccatatt
      361 aatgaatcct gtcgctaatg ccgcagattc tgatattaat attaaaaccg gtactacaga
      421 tataggaagc aatactatag taaaaacagg tgatttagtc acttatgata aagaaaatgg
      481 catgcacaaa aaagtatttt atagttttat cgatgataaa aatcacaata aaaaaatatt
      541 agtcatcaga acgaaaggta ccattgctgg tcagtataga gtttatagcg aagaaggcgc
      601 taataaaagt ggtttagcct ggccttcagc ctttaaggta cagttgcaac tacctgataa
      661 tgaagtagca caaatttctg attactatcc tagaaattca attgatacta aagaatatat
      721 gagtacatta acttatggat tcaacggtaa tgtgactggt gatgattctg gaaaaattgg
      781 cggtttgatt ggtgcaaatg tttcaattgg tcatacactc aaatatgttc aaccagattt
      841 caaaacaatt ttagaaagtc caactgataa aaaagtaggt tggaaagtta tatttaacaa
      901 tatggtgaat caaaattggg gaccatacga cagagattct tggaacccag tatacggcaa
      961 tcaacttttc atgaaaacaa gaaacggttc aatgaaagca gcagataact tccttgatcc
     1021 taacaaagca agttctctat tatcttcagg gttttcacca gacttcgcta cagttattac
     1081 tatggatagg aaagcaacca aacaacaatc aaatatagat gtaatatacg aacgagttcg
     1141 tgatgactat caattacatt ggacttcaac aaattggaaa ggtactaata ctaaagataa
     1201 atggacggat cgttcttcag aaagatataa aatcgattgg gaaaaagaag aaatgacaaa
     1261 ttaatggtca tgcacactca aatattcaaa ttttaacatt agccgataac atcagaaatg
     1321 atgtgtgtcg gctattttag ttgcagtata aaattaaaca tcgatgaata gtaatatata
     1381 tattatgctt ttcaatatat attcatgctt ataaacacga tataagattt aatttttcag
     1441 tttcaaacat ttttaattca tattgtcaaa ccctttattt aaaagttttg aaattgttca
     1501 aa
//
LOCUS       DAKPJH010000223         1406 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.226, whole genome shotgun sequence.
ACCESSION   DAKPJH010000223 DAKPJH010000000
VERSION     DAKPJH010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.226"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            76..>1406
                     /locus_tag="OY092_002738"
     CDS             76..>1406
                     /locus_tag="OY092_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HCX1077602.1"
                     /translation="MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGT
                     QQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVISNKDTIEHEP
                     SVKAEDISKKEDTPKEVADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNV
                     VESTPITIQGKEHFEGYGSVDIQSNPEDLKVSEVTRFNNKSIGKNELTGALQLKNKVS
                     FKNDFEFNIRVANNHQSVTTGADGWGFLFSKGDGNEYLQKGGILGPKGMENSAGFKID
                     TGYNFKDPMDKEEKQAGQGFKGYGTFVKTGADGTTAKVGTNIPTRGKADNSFQYADNS
                     IDTTDGKFHGQLLNNLKLAYNEKSGIMRAEYAGKIWEANISDLGLDKSEAYNFLITSS
                     QRQGTSQGVYANGWMRTDLNNSTFKLTPNLVNKTETKTVEIPFETKREFNP"
BASE COUNT          578 a          190 c          279 g          359 t
ORIGIN      
        1 ctcctattgt atttgtaaaa ttacatgtaa attcactgta agtaaagtgg aaaatatgga
       61 aaaaggagta tgcaaatgag agataagaaa ggaccggtaa ataaaagagt agattttcta
      121 tcaaataaat tgaataaata ttcaataaga aaatttacag ttggaacagc atctatttta
      181 attggctcac taatgtattt gggaactcaa caagaggcag aagcagctga aaacaatatt
      241 gagaatccaa ctacattaaa agataatgtc caatcaaaag aagtgaagat tgaagaagta
      301 acaaacaaag acactgcacc acagggtgta gaagctaaat ctgaagtaat ttcaaacaaa
      361 gacacaatcg aacatgaacc atcagtaaaa gctgaagata tatcaaaaaa ggaggataca
      421 ccaaaagaag tagctgatgt tgctgaagtt cagccgaaat cgtcagtcac tcataacgca
      481 gagacaccta aggttagaaa agctcgttct gttgatgaag gctcttttga tattacaaga
      541 gattctaaaa atgtagttga atctacccca attacaattc aaggtaaaga acattttgaa
      601 ggttacggaa gtgttgatat acaaagcaat ccagaggatc taaaggtatc tgaagtcact
      661 cgtttcaata ataaaagtat tggaaaaaac gaattgacag gagcattaca attaaagaat
      721 aaagtttctt ttaaaaatga ctttgagttt aacattagag tagctaataa tcatcaatcg
      781 gtaacaactg gcgctgatgg atgggggttc ttatttagta aaggtgacgg taacgaatat
      841 ttacaaaagg gaggtatatt aggtcccaaa ggaatggaaa attcagcagg atttaaaatt
      901 gatacagggt ataattttaa agatcccatg gataaagaag agaaacaggc aggacaagga
      961 tttaaagggt atggtacgtt tgtaaaaaca ggtgctgatg gaactacagc aaaggttgga
     1021 acaaacatac caacaagagg taaagcggat aattcattcc aatatgcaga taattctatt
     1081 gatacaacag atggaaaatt ccatggtcaa ttacttaata atttaaaatt agcgtacaat
     1141 gaaaaatcgg ggataatgag agccgaatat gctggtaaaa tttgggaagc taatatatca
     1201 gatttgggat tggataaatc tgaagcatat aactttttaa ttacttctag tcaaagacag
     1261 ggaacatctc aaggtgtata tgcaaatggt tggatgagaa cagatttaaa taactcaaca
     1321 tttaaactaa cgcctaatct agttaataaa acagaaacaa aaacagtaga gataccgttc
     1381 gagacaaaac gtgaatttaa tccgaa
//
LOCUS       DAKPJH010000224         1212 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.227, whole genome shotgun sequence.
ACCESSION   DAKPJH010000224 DAKPJH010000000
VERSION     DAKPJH010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.227"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(186..>1212)
                     /locus_tag="OY092_002739"
     CDS             complement(186..>1212)
                     /locus_tag="OY092_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000162901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosyl transferase"
                     /protein_id="HCX1077603.1"
                     /translation="RSKIPTDYQEKINFLSRDDKNKKDYIKQNKDLIIAVIGVVNEDA
                     IYSFNCRLPLFNPEKLISKELDISEKVKQYGLPINKFENVIDCLKAYEIHQENYFNIP
                     FNQKFSVISLNNANTYQSPKDEERIKNIFSANLKGSVSERDQEILLILLFHLINEVRT
                     NSYYDSVKYWGTFPSSDPENKNTSISFLKECVRKILNGLPKKGSELLIRQKEMQSKHT
                     TRSTERINIKSNKDFETLIVNPELVNKIEGEVVCIIDDYITNGYSAEAAKHLLLAAGA
                     KEVIFLAFGKFGTKYYSTNYKIKGDVSSNYTYEFESELLCERVYEGKQVYNNGNNSEI
                     SRFNELI"
BASE COUNT          400 a          198 c          128 g          486 t
ORIGIN      
        1 aattgttctt taatttctac ttctgtgaaa attatactta attacgatat ctatagatgc
       61 tatatatatt tcaacacgca atacatcaca agtataaacg agcacccata atatattaaa
      121 tgggattaac tgacatttta taaatactaa gaagatacac tgcactaata agtgactaag
      181 ttcatttaaa ttaattcatt aaagcgtgat atttcagaat tattaccatt gttataaact
      241 tgctttcctt cataaaccct ttcgcaaagt aattcacttt caaattcata tgtataatta
      301 cttgatacat caccttttat tttataattt gtggagtaat atttcgttcc gaatttacca
      361 aatgcaagaa aaataacttc tttagctcct gctgctaaaa gcaaatgttt agctgcctcc
      421 gctgaatacc cattagttat gtaatcatct ataatacaaa ctacctctcc ttcaatttta
      481 ttaactagtt ctggattcac tattagagtt tcaaaatctt tgttgctttt aatattaata
      541 cgttctgtac ttctagtagt atgttttgat tgcatttctt tttgtctgat tagcaattct
      601 gatccctttt ttggcaaacc attaagaatt ttcctaacgc attcctttaa aaatgaaata
      661 gatgtatttt tattttcggg atcagaagaa ggaaatgtac cccaatactt aacactatca
      721 taataactat ttgttcttac ctcgttaatc aaatgaaaaa gtaaaattaa taaaatttct
      781 tgatccctct cagatacgct accttttaaa tttgcagaaa aaatattctt tatcctttct
      841 tcatccttcg gactttgata tgtatttgca ttattcaaac ttattacact aaatttttga
      901 ttaaatggta tattaaaata attttcttga tgaatttcat atgcctttaa acaatcaata
      961 acattttcga acttattgat aggcaaacca tattgtttta ctttttcaga tatatccaat
     1021 tctttactaa ttaatttttc tggattaaat aacggtaatc tacagttaaa agagtatata
     1081 gcatcttcat taactactcc tattacagca ataattaaat ctttgttttg ctttatgtaa
     1141 tcttttttat ttttatcatc tctactcaaa aaatttattt tctcttgata atctgttgga
     1201 attttggagc gt
//
LOCUS       DAKPJH010000225         1195 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.228, whole genome shotgun sequence.
ACCESSION   DAKPJH010000225 DAKPJH010000000
VERSION     DAKPJH010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.228"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            33..1151
                     /locus_tag="OY092_002740"
     CDS             33..1151
                     /locus_tag="OY092_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HCX1077604.1"
                     /translation="MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKS
                     KDFTRGYEQNVFAKSELNANKNTTKDKIKNEGVVKTSDTSLKLDNKSAISNGNEINQD
                     IKISNTPKNSSQGNNLVVNNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREA
                     PKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKP
                     NTVSSNNKSNSNSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGA
                     KDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKF
                     QSLDQNWNNGGWRKSEVAHKVVHNYENDMIFIRPFKKA"
BASE COUNT          499 a          142 c          202 g          352 t
ORIGIN      
        1 tatttatata ttattgcaag gagtgtttca tcatgaataa acaacaaagt aaagtacgct
       61 attcaattag aaaagttagt attggaattt tgtcaatttc aattggtatg tttttggcat
      121 tgggtatgtc gaacaaagca tatgcagatg aaattgataa atctaaagat tttacaagag
      181 ggtatgagca aaatgtattc gcgaaatcag agttaaatgc taataaaaat acgacaaaag
      241 acaaaataaa aaatgaaggt gttgttaaaa catcggacac aagtttaaag ttagacaaca
      301 aatcagcaat ttcaaatgga aatgaaatta atcaagatat aaagatttca aatactccga
      361 aaaactcaag ccaaggtaac aatctagttg ttaataacaa tgaacctact aaagaaatta
      421 aaattgcaaa cttggaagct caaaattcta atcagaagaa aacgaataaa gttactaata
      481 attactttgg ttactacagt tttagagaag ctccaaaaac acaaatctat actgtaaaaa
      541 aaggagacac acttagtgct atagcgttaa aatacaaaac tacagtttca aatattcaaa
      601 atacaaataa tatagcaaat cctaatttaa tatttattgg tcaaaaatta aaagtgccaa
      661 tgacaccatt agtagaacca aaaccaaata cagtgtcttc aaataataaa agtaatagta
      721 atagcagtac attaaattat ttgaaaacat tagagaatag aggatgggat ttcgacggta
      781 gttatggatg gcaatgtttc gatttagtca atgtatattg gaatcatctt tatggtcatg
      841 gattaaaagg atatggagct aaagatatac catatgcaaa taattttaat agtgaagcta
      901 aaatttatca caacacacca actttcaaag ctgaacctgg ggacttagtg gtttttagtg
      961 gaagatttgg tggaggatat ggtcatacag ctattgtttt aaatggtgat tatgatggaa
     1021 aattaatgaa gttccaaagt ttagatcaaa actggaataa tggtggatgg cgtaaatcag
     1081 aggttgcaca taaagttgtt cataattatg aaaatgatat gatttttatt agaccattta
     1141 aaaaagcata atttaaatca aaggcaggac attgaaatat gaaatttaca acttt
//
LOCUS       DAKPJH010000226         1130 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.229, whole genome shotgun sequence.
ACCESSION   DAKPJH010000226 DAKPJH010000000
VERSION     DAKPJH010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.229"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            201..1055
                     /locus_tag="OY092_002741"
     CDS             201..1055
                     /locus_tag="OY092_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HCX1077605.1"
                     /translation="MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIK
                     IEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQ
                     FLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK
                     SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHF
                     LSSTDQNTLYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYK
                     DDSKHLNK"
BASE COUNT          450 a          141 c          195 g          344 t
ORIGIN      
        1 aaaaagataa aacatttatg attcgtatat caacgtaaag taatgttgat aaatcgttta
       61 aaacgtttca tttacattac tgtttattta tgaatatgta acaatgcata gataaaattg
      121 ttaaacggtt ttaataatgt taaactttat tatcgtagtc aaactgaatg tataacaaca
      181 atgacctaag aggtgtggat atgaataaac acaagaaagg ttctattttt ggaataatag
      241 gacttgttgt catatttgct gttgtctcat ttttattttt ctcaatgata tccgatcaga
      301 tatttttcaa acatgttaaa tccgacatta agattgaaaa gttaaatgtt acattaaacg
      361 atgcagcaaa gaaacaaata aataattata cgagtcaaca ggtatcaaat aaaaagaatg
      421 atgcatggag agatgcatct gcaactgaaa ttaaaagtgc aatggatagc ggtactttta
      481 tcgataatga aaagcaaaaa tatcaatttt tagatttatc aaagtatcaa gggattgata
      541 aaaatagaat taaacgtatg ttagtagata gaccaacgtt attgaaacat acggatgatt
      601 tcttaaaagc tgctaaagat aagcacgtta acgaagttta tttaatttca catgcattat
      661 tagaaactgg cgcagttaaa agtgaattag ctaatggagt cgaaattgat ggcaaaaaat
      721 actacaattt ctatggagta ggagcccttg ataaagaccc aattaaaaca ggtgcagaat
      781 atgctaaaaa gcatggttgg gatacacctg aaaaagctat ttcaggcggt gctgatttca
      841 ttcataagca cttcttatca agcacagatc aaaatacatt gtatagtatg agatggaatc
      901 caaaaaatcc aggagaacat caatatgcta ctgatattaa gtgggcagaa agtaatgcaa
      961 caattatcgc tgacttttat aagaacatga agactgaagg aaaatacttc aaatactttg
     1021 tgtataaaga tgacagtaaa catttgaata agtaatttat tagagttaag ttatgatatg
     1081 acttgctcaa gtataaaaag acgctttcta tcgcaataaa tagaaagcgt
//
LOCUS       DAKPJH010000227         1117 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.231, whole genome shotgun sequence.
ACCESSION   DAKPJH010000227 DAKPJH010000000
VERSION     DAKPJH010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.231"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            10..135
                     /locus_tag="OY092_002742"
     CDS             10..135
                     /locus_tag="OY092_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077606.1"
                     /translation="MLDSQLDGNVTAKELSESFKELVEEFESIEKAKKNSNSKDK"
     gene            197..457
                     /locus_tag="OY092_002743"
                     /pseudo
     CDS             197..457
                     /locus_tag="OY092_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282612.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            506..853
                     /locus_tag="OY092_002744"
                     /pseudo
     CDS             506..853
                     /locus_tag="OY092_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456552.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            864..1058
                     /locus_tag="OY092_002745"
     CDS             864..1058
                     /locus_tag="OY092_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077607.1"
                     /translation="MRIEDAYRKDVIITLLNNEEYEGFVTDYENEFESETGNLVVDIQ
                     TDFAVYSFDETEIKSIRLLK"
BASE COUNT          478 a          113 c          201 g          325 t
ORIGIN      
        1 attttaatta tgttagattc acaattagat ggaaatgtaa ctgcaaaaga attgagtgaa
       61 tcttttaaag aattagttga agaatttgaa agtatagaaa aagcgaaaaa gaattcaaat
      121 tcaaaagata aatagcatcc tttttagaca gataaagaga aagtggtgct atttttatac
      181 gcttttttaa ctatttactg aaaatgcaga agcacaaaag ttaacatatt taaaagaact
      241 tggtgaagat ggcgaatata aatatgttgc caaaatagat agtaaaacat ctaaattatg
      301 tcattcactt aacggaaaaa tatttaaagt taaagatatg ataccaggtg tgaatgcgcc
      361 acctatgcat ccttggtgta gaagtaccac agtgccacat gttggcaatt ggcgggacaa
      421 gttctttaaa gagcgtgaag gtaaatatca agtagaagta aaagaagcat aattacagga
      481 aaaagctaaa aaccagatga aagaaatgat taaaaatggt aaaataaaaa tagaaataaa
      541 ttgcggaaaa taaaatagat atatgttagg tcatcaccta tataatgaaa ataaaaaaag
      601 agccatttta aataataaga aattgcctag ctatacaata ctttctatag atttattgaa
      661 tgaattgtta agagaaaaaa tgtcaacagg caatctaata ttaagtgatg agcgatttga
      721 tttgaaagag attattaatt ttaatcaaat tattggaaaa atacatatcg aaaatgtgta
      781 tattgaaacc agaaagggaa aagtgcatta ttcgaagaca ggtgctcata tagtacctta
      841 tattgataag taggtgaaaa gtattgagaa ttgaagatgc atatcgtaaa gatgttatta
      901 tcacgctttt gaataatgaa gaatacgaag ggtttgtaac tgactatgaa aatgaattcg
      961 agagcgaaac aggaaatctt gttgtagata tacagactga ttttgctgtt tattcgtttg
     1021 atgaaactga gataaaaagt attagattat taaaataatt acaaaatagc atcctttcta
     1081 caaaaagcta aaaaagaaat gcttgaaatg ataagta
//
LOCUS       DAKPJH010000228         1099 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.232, whole genome shotgun sequence.
ACCESSION   DAKPJH010000228 DAKPJH010000000
VERSION     DAKPJH010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.232"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..518
                     /locus_tag="OY092_002746"
     CDS             <1..518
                     /locus_tag="OY092_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077608.1"
                     /translation="RYIHIQSTDLLSVGSDDAGDRIASNSIYRRTYSAAANLHITSAG
                     TIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRK
                     LSEDTYKLDRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLR
                     IKKLEESKNAG"
     gene            508..660
                     /locus_tag="OY092_002747"
     CDS             508..660
                     /locus_tag="OY092_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077609.1"
                     /translation="MQDNKQGLQANPEYTIHYLSQEIMRLTQENAMLKAYIQENKENQ
                     QCAEEE"
     gene            707..994
                     /locus_tag="OY092_002748"
     CDS             707..994
                     /locus_tag="OY092_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077610.1"
                     /translation="MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQ
                     DFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV"
BASE COUNT          427 a          152 c          219 g          301 t
ORIGIN      
        1 ataggtatat tcatatacag agtacagacc tactgtctgt aggttcagat gatgcaggag
       61 ataggatagc ttctaactca atttatagac gtacttattc ggccgcagct aatttgcata
      121 ttacttctgc tggcacaatt gggcgttcga catcagcgcg taaatacaag ttatctatcg
      181 aaaatcaata taacgataga gatgaacaac tggaacattc aaaagctatt cttaacttac
      241 ctattagaac gtggtttgat aaagctgagt ctgaaatttt agctagagag ctgagagaag
      301 atagaaaatt atcggaagac acctataaac ttgatagata cgtaggtttg attgctgaag
      361 aggtggagaa tttaggatta aaagagtttg tcacgtatga tgacaaagga gaaattgaag
      421 gtatagcgta tgatcgtcta tggattcatc ttatccctgt tatcaaagaa caacaactaa
      481 gaatcaagaa attggaggag tcaaagaatg caggataaca aacaaggatt acaagctaat
      541 cctgaatata caattcatta tttatcacag gaaattatga ggttaacaca agaaaacgcg
      601 atgttaaaag cgtatataca agaaaataaa gaaaatcaac aatgtgctga ggaagagtaa
      661 tccttagcac tatttttata caaaaattta aggaggtcat ttaattatgg caaaagaaat
      721 tatcaacaat acagaaaggt ttattttagt acaaatcgac aaagaaggta cagaacgtgt
      781 agtatatcaa gatttcacag gaagttttac aacttctgaa atggttaacc atgctcaaga
      841 ttttaaatct gaagaaaacg ctaagaaaat tgcggagacg ttaaatttgt tatatcaatt
      901 aactaacaaa aaacaacgtg tgaaagtagt taaagaagta gttgaaagat cagatttatc
      961 tccagaggta acagttaaca ctgaaacagt atgaaaagct atgagttaga tactcataat
     1021 ctttattctt ttagaaagcg ggtgtactga attggggtgg ttcaaaaaac acgaacatga
     1081 atggcgcatc agaaggtta
//
LOCUS       DAKPJH010000229         1089 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.233, whole genome shotgun sequence.
ACCESSION   DAKPJH010000229 DAKPJH010000000
VERSION     DAKPJH010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.233"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            194..628
                     /locus_tag="OY092_002749"
     CDS             194..628
                     /locus_tag="OY092_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HCX1077611.1"
                     /translation="MKLKSFITVTLALGMIATTGATVASNEVSAAEKDKQPATQKAKE
                     MQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKS
                     AVYTITWKDSSKKEVDLKKDSYTANLFDSNSIKQIDINVKTK"
     gene            complement(885..1070)
                     /locus_tag="OY092_002750"
     CDS             complement(885..1070)
                     /locus_tag="OY092_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HCX1077612.1"
                     /translation="MKHLVTFFWALLLMQMVNFVLNSLVGGDSLNLVNPIIMAVLFTI
                     FTAIFAAVIKPPKDSSQ"
BASE COUNT          423 a          151 c          163 g          352 t
ORIGIN      
        1 aatgtaaact tagttattgt aatgtgaatt tatttgaaaa aatagaaagt attaacaatt
       61 atagctttta cattaattaa aatttatttt taaaaacaag taaacaattt acatacttat
      121 aatttttgaa acttttcaat ttgtgttata ttgattttgt aagatacttt aactcacaaa
      181 ggagagagat tatatgaaat taaaatcatt tataactgta actttggcac tgggcatgat
      241 cgcaacgact ggcgctactg tggcaagtaa tgaggtatct gcagcagaaa aggacaaaca
      301 accagcaact caaaaagcta aagaaatgca aaatgttcca tatacaattg cagtagatgg
      361 cattatggct ttcaatcaat cttacttaaa tttaccaaaa gatagccaat tatcatattt
      421 agatttagga aataaagtta aagctttatt atatgatgaa cgcggtgtaa cacctgagaa
      481 gattcgaaat gcaaaatctg ccgtttacac gattacttgg aaagatagta gtaaaaaaga
      541 agtggatctt aagaaagata gctacacagc aaacttgttt gattcaaatt caattaaaca
      601 aattgatatt aatgtaaaaa ctaaataaac acttaaaatt atcaaattca acatgaagca
      661 tttaatttta cagtgatgat tataatataa ttgccttgat acaaagatta ctcgtaaatg
      721 acatctttgt attaaggctt tttctaaatt taaaagtgat gggttagagg tcattgagct
      781 ttaaaatatt caaaatacaa aacattaatg gccaaaaata aaagccgcct ttatctgggc
      841 agcttcaata ataagaaaga catatttcat tttatactaa atagttattg tgatgaatct
      901 ttcggcggtt taattactgc agcaaaaatt gctgtgaaaa tcgtgaacaa tactgccatg
      961 ataattggat tcactaaatt taagctgtct ccacctacta ggctattaag tacaaagtta
     1021 accatttgca ttaataataa tgcccaaaag aatgttacga ggtgtttcat gtcattctac
     1081 ctccacttt
//
LOCUS       DAKPJH010000230         1089 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.234, whole genome shotgun sequence.
ACCESSION   DAKPJH010000230 DAKPJH010000000
VERSION     DAKPJH010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.234"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>1089
                     /gene="fmhC"
                     /locus_tag="OY092_002751"
     CDS             <1..>1089
                     /gene="fmhC"
                     /locus_tag="OY092_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhC"
                     /protein_id="HCX1077613.1"
                     /translation="DKNEVIAACLLTEARIFKFYKYFYSHRGPLLDYFDAKLVCYFFK
                     ELSKFIYKNRGVFILVDPYLIENLRDANGRVIKNYNNSVIVKMLGKIGYLHQGYTTGY
                     SNKSQIRWISVLDLKDKDENQLLKEMEYQTRRNIKKTIEIGVKVEDLSIEETNRFYKL
                     FQMAEEKHGFHFMNEDYFKQMQEIYKGKAMLKIACIDLNEYQDKLKIQLLKIENEMMT
                     VNRSLNENPNSKKNKSKLNQLNMQLSSINNRISKTEELILEDGPVLDLAAALFICTDD
                     EVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRYNFYGITGVFSNEADDFGVQQ
                     FKKGFNAHVEELIGDFIKPVRPILFKFA"
BASE COUNT          444 a          106 c          177 g          362 t
ORIGIN      
        1 atgataaaaa tgaagttata gctgcatgtt tattaacaga agcacgtatt tttaaattct
       61 acaaatattt ctactctcat agaggccctt tacttgatta tttcgatgct aaattagttt
      121 gttacttttt taaagaatta tctaaattca tttataaaaa tagaggagta tttattcttg
      181 ttgatccata tttaatagag aatttaagag atgcaaatgg tagggtaata aagaattata
      241 ataattcagt gatagtaaag atgctaggga aaattgggta tctccatcaa ggttatacaa
      301 caggatattc aaataaaagt caaattaggt ggatttctgt attggattta aaagataaag
      361 atgagaatca acttttaaaa gaaatggaat accaaactag aagaaatata aaaaagacta
      421 ttgagattgg tgttaaggtt gaagatttat ctattgaaga aacaaatcga ttttataaat
      481 tgtttcaaat ggctgaagaa aaacatggtt ttcatttcat gaatgaagat tattttaaac
      541 aaatgcaaga aatatataaa ggtaaggcaa tgttaaagat agcttgtata gatcttaatg
      601 aatatcaaga taaattaaaa atacaattat tgaaaatcga aaatgaaatg atgactgtga
      661 acagatcatt aaatgaaaat ccaaattcta aaaagaataa atcaaaatta aatcagttaa
      721 atatgcaatt atctagtatt aataatagaa ttagtaaaac cgaagaacta atattagaag
      781 atggacctgt tttggattta gctgctgctt tatttatatg tactgatgat gaagtttatt
      841 atctatcaag tggatcaaat cctaaatata atcagtatat gggtgcatat catctacaat
      901 ggcatatgat aaaatatgca aaatcacata atattaatag gtataatttt tatggaataa
      961 caggcgtctt tagtaatgag gcggatgatt ttggtgtaca acaatttaaa aaaggtttta
     1021 atgcacatgt tgaagaatta attggtgatt tcatcaaacc agtaagaccg attctattta
     1081 aatttgcaa
//
LOCUS       DAKPJH010000231         1081 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.235, whole genome shotgun sequence.
ACCESSION   DAKPJH010000231 DAKPJH010000000
VERSION     DAKPJH010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.235"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            163..939
                     /gene="seg"
                     /locus_tag="OY092_002752"
     CDS             163..939
                     /gene="seg"
                     /locus_tag="OY092_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_031927817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type G"
                     /protein_id="HCX1077614.1"
                     /translation="MKKLSTVIIILILEIVFHNMNYVNAQPDPKLDELNKVSDYKNNK
                     GTMGNVMNLYTSPPVEGRGVINSRQFLSHDLIFPIEYKSYNEVKTELENTELANNYKD
                     KKVDIFGVPYFYTCIIPKSEPDINQNFGGCCMYGGLTFNSSENERDKLITVQVTIDNR
                     QSLGFTITTNKNMVTIQELDYKARHWLTKEKKLYEFDGSAFESGYIKFTEKNNTSFWF
                     DLFPKKELVPFVPYKFLNIYGDNKVVDSKSIKMEVFLNTH"
BASE COUNT          407 a          119 c          166 g          389 t
ORIGIN      
        1 ttgtaattag taataatgat aaatagaatt ttaatttatt ctgctagtga atttttagtt
       61 ttaaaacaat gctatcgaca cactacaacc tgaactatct ataagcgtga atttataata
      121 aggttcattg tcaaatagac tgaataagtt agaggaggtt ttatgaagaa attatctact
      181 gtaattatta ttttgattct agaaatagtt tttcataata tgaattatgt gaatgctcaa
      241 cccgatccta aattagacga actaaataaa gtaagtgatt ataaaaataa taagggaact
      301 atgggtaatg taatgaatct ttatacgtct ccacctgttg aaggaagagg agttattaat
      361 tctagacagt ttttatctca tgatttaatt tttccaattg agtataagag ttataatgag
      421 gttaaaactg aattagaaaa tacagaatta gctaacaatt ataaagataa aaaagtagac
      481 atttttggcg ttccatattt ttatacatgt ataataccta aatctgaacc ggatataaac
      541 caaaattttg gaggttgttg tatgtatggt ggtcttacat ttaatagttc agaaaatgaa
      601 agagataaat taattactgt acaggtaaca atcgacaata gacaatcact tggatttaca
      661 ataactacaa ataagaatat ggttactatt caggaactag attacaaagc aagacactgg
      721 ctcactaaag aaaaaaagct atacgagttt gatggttctg catttgaatc tggatatata
      781 aaatttactg aaaagaacaa tacaagtttt tggtttgact tatttcctaa aaaagaacta
      841 gtaccttttg ttccatataa gtttttaaat atttacggag ataataaagt tgttgattct
      901 aagagtatta aaatggaagt atttcttaat actcactgat aagtatattt gatatcacta
      961 tacaatcata aagtgcgttt ttcgaacttt tgttctaagt gttttataga ttcatgtaaa
     1021 tagttagttt attgccggtt aaattattta atttttctaa atgatttatt ctaaatatgt
     1081 t
//
LOCUS       DAKPJH010000232         1079 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.236, whole genome shotgun sequence.
ACCESSION   DAKPJH010000232 DAKPJH010000000
VERSION     DAKPJH010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.236"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..945
                     /locus_tag="OY092_002753"
     CDS             <1..945
                     /locus_tag="OY092_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HCX1077615.1"
                     /translation="TSFFNKNILSHSFNGKKSLLKRRLINIKEANLKKQSKLILIFIC
                     IFTFFIMIIQSQFLMGQSLTDYNYKKPLQSDYQILDESKNFGSNSGSFVMYSMKKDKY
                     YIYNEKESRKRYSPDSTYKIYLALFGLDRHIISDKNSRMSWNHNHYPFDSWNKDQDLN
                     TAIQNSVNWYFERISNQLSKNYTSDQLKQLNYGNKNLGSYKAYWLEDSLKISNLEQVI
                     VLKNMMEQNNHFSKNEKKQLSSSLLIRKNENYELYGKTGTGIVNGKYNNGWFVGYVIT
                     NHDKYYFSTHLSDEKASGENAKLINEKILKEMGVLNGQ"
     gene            935..>1079
                     /locus_tag="OY092_002754"
     CDS             935..>1079
                     /locus_tag="OY092_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HCX1077616.1"
                     /translation="MANKQVEISMAEWDVMNIIWNKKSVSANEIVVEIQKNKEVSDKT
                     IRTL"
BASE COUNT          450 a          117 c          165 g          347 t
ORIGIN      
        1 acctcatttt tcaacaaaaa tatattaagc cattcattta atggtaaaaa atcattactc
       61 aaaagaagat taattaatat aaaagaagcc aatctgaaga agcagtcaaa attaattcta
      121 atttttattt gtatttttac tttttttatc atgataattc aaagccagtt tttaatgggg
      181 caatccttaa ctgattataa ttataaaaag cccttacaaa gcgattacca aattttagat
      241 gaaagtaaaa attttggttc aaatagtgga tctttcgtta tgtacagcat gaagaaagac
      301 aaatactata tttataatga aaaagaaagt agaaaaagat attctcctga ttcaacttac
      361 aaaatttatt tagcactgtt tggacttgac cgtcatatta taagtgataa aaattcacgt
      421 atgtcatgga atcataatca ttatcctttc gattcttgga ataaggatca agatttaaat
      481 acggcaatac aaaactcagt taattggtac ttcgaacgta ttagtaatca attatcaaag
      541 aactatactt ctgatcaact caagcaatta aattatggta ataaaaattt gggaagttat
      601 aaagcctatt ggttggaaga tagtttgaaa atatctaatc ttgaacaagt aatagtttta
      661 aaaaatatga tggaacaaaa taaccatttt agtaaaaatg aaaagaaaca attatcttct
      721 tcgttattga ttagaaaaaa tgaaaattat gaattgtatg ggaaaacagg tacaggtata
      781 gtaaacggga aatataataa tgggtggttt gtaggttacg taattacaaa tcatgataag
      841 tattattttt ctacacattt atcagatgaa aaagcctctg gtgaaaatgc taaattaata
      901 aatgaaaaaa tattaaaaga aatgggtgtt ttaaatggcc aataagcaag ttgaaatatc
      961 tatggctgaa tgggatgtta tgaatataat atggaataaa aaatcagtat cagctaatga
     1021 aattgtagtt gagattcaaa aaaataaaga agttagcgat aagacgatta gaacattaa
//
LOCUS       DAKPJH010000233         1074 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.237, whole genome shotgun sequence.
ACCESSION   DAKPJH010000233 DAKPJH010000000
VERSION     DAKPJH010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.237"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            49..744
                     /locus_tag="OY092_002755"
     CDS             49..744
                     /locus_tag="OY092_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1077617.1"
                     /translation="MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTT
                     LMKVILGYSSFQSGNFNVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQD
                     IDKIVSQLHMDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRD
                     VRELIVQKAQEGVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLE
                     NVLLEIIEREDQA"
     gene            746..>1074
                     /locus_tag="OY092_002756"
     CDS             746..>1074
                     /locus_tag="OY092_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCX1077618.1"
                     /translation="MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNEIFT
                     PQESFTSAYNGFSWFAFLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLF
                     IISLIYFV"
BASE COUNT          412 a          144 c          169 g          349 t
ORIGIN      
        1 tataaaatct taagattcag attatttaat agcaaaggag atagtgatat ggatgtttta
       61 acaatagaac atttaacaaa gaagataggc aacaaaacga ttctcgaaga tgtatcattt
      121 aagctgaaac gcggacaaat agttggtctt gttggagcga atggtgcagg taaaacaact
      181 ttaatgaaag ttatattagg ttactctagt ttccaaagcg ggaattttaa tgttattaac
      241 agcaaggaca gcaaaagcaa tatcggtgca ttgattgaaa atccaggaat atatcctttt
      301 atgtctggat atgaaaactt gaagttattg aacgaatcaa aaaacactca agatatcgat
      361 aaaattgtct cacaacttca tatggatgaa tacattcata aaaaagctaa aacgtattct
      421 cttggtatga aacaaaaatt aggaattgct atagcatttt taaataaacc tcaattcatt
      481 atcttagatg aaccaatgaa cggcttagat ccaaaagctg tgcgagatgt acgtgaattg
      541 attgtacaaa aagcgcaaga aggtgtcact ttcttaattt cgagtcatat tttaagtgag
      601 ttagttaaaa tcacaaactc tatccttatt attaacaaag gtaaaattgt tacagaaaca
      661 tcggaagaag aacttaaaca atttaaagat aatgatttag aaaatgtatt actagaaatc
      721 atagaaaggg aggatcaagc ataaaatggg aactttaatt aaacaagaat gtttcaaatt
      781 atttaaaaag aaatcaactt ttatcgcacc tattgtcttt attctactaa tggttgctca
      841 aggttatatc gctacaaaat acaatgaaat ttttacgcca caggaatctt ttacatctgc
      901 ttataatggt ttttcatggt ttgcattttt attaattatt caagcaagta caatcatttc
      961 aatggaattt cattacggta cgattaaaaa tttactctat cgtgaatatt caagaacaac
     1021 tatgattgtt agcaaaatca tcacattatt tattatttct ttaatttatt ttgt
//
LOCUS       DAKPJH010000234         1060 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.238, whole genome shotgun sequence.
ACCESSION   DAKPJH010000234 DAKPJH010000000
VERSION     DAKPJH010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.238"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(77..>1060)
                     /locus_tag="OY092_002757"
     CDS             complement(77..>1060)
                     /locus_tag="OY092_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HCX1077619.1"
                     /translation="KKCIKTLFLSIILVVMSGLYHSAHASDSLSKSPENWMSKLDDGK
                     HLTEINIPGSHDSGSFTLTDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMIS
                     VHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYY
                     NNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFET
                     KINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNS
                     TYNYASHINPEIAKTIKANGKARTGWLIVDYAGYTWSGYDDIVSEIIDSNK"
BASE COUNT          325 a          214 c          133 g          388 t
ORIGIN      
        1 tcaaaataaa aacgagtagt gaaaataatt agaatctaac tattttcata ctcgtcttaa
       61 tatcattatt gaatccttat ttattactat ctataatttc gcttacgata tcatcatatc
      121 cagaccacgt atatcctgca tagtcaacaa tcagccaacc cgttctagct ttcccatttg
      181 ctttaatcgt ttttgcaatt tcaggattta tatgtgatgc atagttataa gtactattaa
      241 atgcgctgcc tccagacgct acactcaaga aattcacata tacattgtct ttgttactat
      301 ccgttttagc tttagccaat aaatttttaa cagcttcaac ttttttatca tagtaatctt
      361 tatactcatc ttgtactttt aaatttaagc taccattatt aattttcgtt tcaaatgtcg
      421 cattgtctgc ccattgaatg ccagacgtgt cagcaccata accactcttt atgtatgtac
      481 cacccattct attgaatagg acaattttac cttttgtctc ttttaaagta ggattcgcgt
      541 tacttcctgt gtaaaaaaga ttctgatatt gtgggttatt ataataatat tctctaaaaa
      601 tctcttcaaa tgtcttcgta actttagaat cgctatcgta gtcctttttc atagacatca
      661 caattgtttc gtttggataa gcactcaagt aatatttagc atcatctaaa aatttcccta
      721 gttcatgatg cagataaacc atgccgtgat gaactgaaat catattatca gcacttgctc
      781 tgcctctaat atcaaaaaac ctgactcctg acttcatttg ggtaaggtaa tctttatctt
      841 gagtctttgc ccaaactgat tttactggat cagttaaagt gaatgagcca ctatcatgtg
      901 aacccggtat attaatctca gttaaatgtt ttccatcatc aagtttactc atccaatttt
      961 ccggactttt actcaacgaa tctgacgcat gtgctgaatg atataaacca ctcatcacta
     1021 ctaaaatgat acttaaaaac aaagtcttaa tacacttttt
//
LOCUS       DAKPJH010000235         1058 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.239, whole genome shotgun sequence.
ACCESSION   DAKPJH010000235 DAKPJH010000000
VERSION     DAKPJH010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.239"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            2..754
                     /gene="sarS"
                     /locus_tag="OY092_002758"
     CDS             2..754
                     /gene="sarS"
                     /locus_tag="OY092_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarS"
                     /protein_id="HCX1077620.1"
                     /translation="MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLF
                     HQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQRE
                     KIAERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVE
                     FTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILI
                     HMDDAQQDHAEQLLAQVNQLLADKDHLHLVFE"
BASE COUNT          408 a          160 c          128 g          362 t
ORIGIN      
        1 aatgaaatat aataaccatg acaaaattag agattttata atcattgaag catatatgtt
       61 tcgttttaag aaaaaagtca agcctgaagt cgatatgact ataaaagaat ttatattact
      121 gacttattta tttcatcagc aagaaaacac acttccattt aagaagattg tttcagattt
      181 atgttataaa caatcggatt tagtacagca tataaaagta cttgtgaaac attcatatat
      241 tagtaaagtt cgaagtaaaa ttgatgagcg taatacttac atttcaatat ctgaagaaca
      301 acgagagaaa attgcagaac gtgttacatt gtttgatcaa atcattaaac aatttaatct
      361 tgcagatcaa agtgaatcac agatgatacc aaaagatagt aaagaatttc taaacttgat
      421 gatgtataca atgtatttca agaatattat caaaaagcat ctaacattaa gttttgtaga
      481 atttacaatt ctagctatta tcacttctca aaataaaaac atcgttcttc ttaaagattt
      541 aattgaaaca atccaccata aataccctca aactgttaga gctctcaata atttaaaaaa
      601 gcaaggctat ctaataaaag aacgctcaac tgaagatgaa agaaaaattt taattcatat
      661 ggatgacgcg cagcaagacc atgctgaaca attattagct caagtgaatc aattattagc
      721 agataaagat catttacatc ttgtttttga ataatatctc tattacgcaa gtgtgctgta
      781 ttctaaagta cacttgtgtt ttctattttt taataaaacc tcagcacatt atgaacaact
      841 ttctattttc tatatctctt aaaaccattt ccgaaattaa acctcagcac attcaaagcc
      901 ccactttatt cttaaaaata ttttttaact tatacgtatt aaaccgcttt cattataaaa
      961 aatatctcta tattttatct gtttttatta atcgaaatag cgtgattttg cggttttaag
     1021 ccttttactt cctgaataaa tctttgagca aaatattt
//
LOCUS       DAKPJH010000236         1054 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.240, whole genome shotgun sequence.
ACCESSION   DAKPJH010000236 DAKPJH010000000
VERSION     DAKPJH010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.240"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            40..933
                     /locus_tag="OY092_002759"
     CDS             40..933
                     /locus_tag="OY092_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077621.1"
                     /translation="MKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQF
                     KVNKDTGAYTYTYDKNNAPNNNHQNQSRTNDNHQHANQRDFNNNQYHSSLSGQYTHIN
                     DAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIA
                     EFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFW
                     GDAKNWAGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIG
                     EYIVSSRTISASEVSSYSYIH"
BASE COUNT          396 a          204 c          174 g          280 t
ORIGIN      
        1 taaaattaaa ttaaatacat aaaggattaa atggttatta tgaagaaaac aattttactg
       61 acgatgacaa ctcttacttt atttagtatg tcgcctaact cggctcaagc atacacgaat
      121 gatagcaaaa cattagaaga agcaaagaaa gcacacccaa acgcacagtt caaagtgaat
      181 aaagacaccg gcgcgtatac ttatacttat gacaaaaaca acgcgccaaa caacaatcat
      241 caaaatcagt cacgtacaaa cgacaatcat caacacgcaa atcaacgtga ttttaacaac
      301 aatcagtacc attcttcatt aagtggtcag tatacgcaca ttaatgacgc aattgattca
      361 cacacaccgc ctcaaacgtc accaagcaat cctttgacac cagccatacc gaatgtcgaa
      421 gacaatgacg atgaattaaa taacgctttt tcaaaagata acaaagggct tattacaggc
      481 atcgatttag acgaattgta tgacgaatta caaatcgccg aatttaatga caaagcaaag
      541 actgctgacg gtaaaccttt agcattaggt aacggtaaaa tcattgatca gcctcttatc
      601 acaagtaaga acaacttata tactgctgga caatgtacat ggtatgtctt tgataaacgt
      661 gccaaagatg gacacacgat tagtacattt tggggagatg ctaaaaactg ggcaggccaa
      721 gcttcaagca atggcttcaa agtagataga cacccaacac gaggatcaat tttgcaaaca
      781 gtaaacggtc catttggtca tgtagcctac gttgagaaag ttaatattga tggaagtatt
      841 ctaatttcag aaatgaattg gattggtgaa tatatcgttt catcaagaac catctctgct
      901 tcagaagttt catcatatag ttacatccat taaattaatc atgacatcaa taaaaagcga
      961 ccagttcgca gtttacaatt cgtaacactg caaaattggt cgctttattt tgtatgttat
     1021 tcgattataa aatatgatgt ttaccttcaa aatt
//
LOCUS       DAKPJH010000237         1032 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.242, whole genome shotgun sequence.
ACCESSION   DAKPJH010000237 DAKPJH010000000
VERSION     DAKPJH010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.242"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>1032)
                     /locus_tag="OY092_002760"
     rRNA            complement(<1..>1032)
                     /locus_tag="OY092_002760"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          226 a          308 c          227 g          271 t
ORIGIN      
        1 gcacgtgtgt agcccaaatc ataaggggca tgatgatttg acgtcatccc caccttcctc
       61 cggtttgtca ccggcagtca acttagagtg cccaacttaa tgatggcaac taagcttaag
      121 ggttgcgctc gttgcgggac ttaacccaac atctcacgac acgagctgac gacaaccatg
      181 caccacctgt cactttgtcc cccgaagggg aaggctctat ctctagagtt gtcaaaggat
      241 gtcaagattt ggtaaggttc ttcgcgttgc ttcgaattaa accacatgct ccaccgcttg
      301 tgcgggtccc cgtcaattcc tttgagtttc aaccttgcgg tcgtactccc caggcggagt
      361 gcttaatgcg ttagctgcag cactaagggg cggaaacccc ctaacactta gcactcatcg
      421 tttacggcgt ggactaccag ggtatctaat cctgtttgat ccccacgctt tcgcacatca
      481 gcgtcagtta cagaccagaa agtcgccttc gccactggtg ttcctccata tctctgcgca
      541 tttcaccgct acacatggaa ttccactttc ctcttctgca ctcaagtttt ccagtttcca
      601 atgaccctcc acggttgagc cgtgggcttt cacatcagac ttaaaaaacc gcctacgcgc
      661 gctttacgcc caataattcc ggataacgct tgccacctac gtattaccgc ggctgctggc
      721 acgtagttag ccgtggcttt ctgattaggt accgtcaaga tgtgcacagt tacttacaca
      781 tatgttcttc cctaataaca gagttttacg atccgaagac cttcatcact cacgcggcgt
      841 tgctccgtca ggctttcgcc cattgcggaa gattccctac tgctgcctcc cgtaggagtc
      901 tggaccgtgt ctcagttcca gtgtggccga tcaccctctc aggtcggcta tgcatcgttg
      961 ccttggtaag ccgttacctt accaactagc taatgcagcg cggatccatc tataagtgac
     1021 agcaagaccg tc
//
LOCUS       DAKPJH010000238         1028 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.243, whole genome shotgun sequence.
ACCESSION   DAKPJH010000238 DAKPJH010000000
VERSION     DAKPJH010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.243"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..162
                     /locus_tag="OY092_002761"
                     /pseudo
     CDS             1..162
                     /locus_tag="OY092_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066885.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(140..241)
                     /locus_tag="OY092_002762"
     CDS             complement(140..241)
                     /locus_tag="OY092_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077622.1"
                     /translation="MQGFKEKHQELKSALCQIGLMRSISEVRQLNIA"
     gene            complement(364..459)
                     /gene="pepA1"
                     /locus_tag="OY092_002763"
     CDS             complement(364..459)
                     /gene="pepA1"
                     /locus_tag="OY092_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin
                     PepA1"
                     /protein_id="HCX1077623.1"
                     /translation="MMLIFVHIIAPVISGCAIAFFSYWLSRRNTK"
     gene            604..708
                     /locus_tag="OY092_002764"
     CDS             604..708
                     /locus_tag="OY092_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001807442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077624.1"
                     /translation="MVRLYENGKPRNEIIREYDLTPLTLGKWIKQHQK"
BASE COUNT          397 a          150 c          176 g          305 t
ORIGIN      
        1 tttatcaaat ggtcctttag aagggataaa caacaaaatt taattaaacg tacatctttt
       61 ggttaaggaa gttataatca tttgcgaaat cgaatattat tatgtttaaa actttacgct
      121 ccaaaaagta aaaaggaagc taagcaatgt ttagttgcct aacttcggat attgaacgca
      181 tcagtccaat ttggcataga gcactcttta gttcttgatg tttctcttta aaaccttgca
      241 tattttacaa aaagaaaaat tagcagtata attgagataa cgaaaataag tatttactta
      301 tacaccaatc ccctcactat ttgcggtagt gaggggattt ttattggtgc ggctatatgt
      361 cacctatttt gtattgcgtc tacttagcca ataagaaaaa aacgcaatgg cacagccact
      421 gatgactggt gctatgatgt gaacgaaaat aagcatcacc ttatacacct cctctctgcg
      481 tctaaattga cgcctgagag ataggcgact ctactattat atcatctaat tggacaaatt
      541 ctatgagagt agattttgtt aatttaagaa agaagaacat ttagttcaga gtttaagtta
      601 taaatggtta gattatatga aaatggtaag ccaagaaatg aaattatacg cgagtatgat
      661 ttaacacctt tgacgttagg aaaatggata aagcaacatc aaaaataagg ttcattcaat
      721 catcaagata acttaacaga tgaagaaaaa gagctgatta aattacacaa agaagttcaa
      781 catttaaaaa tggagaacga tattttaaag caagcagcgc tgattatggg acgaaaatag
      841 aagtcattca aaagaatgca catcaatatt cagtatcagc aatgggtaaa gtcttaaaaa
      901 tactaagaag tacctattat gattctataa aaagaaaaga taataaaatc actaaagatg
      961 attcaaacgt agaacgtgcc gtcataaata tttttaattc taatagaaaa gtctttggta
     1021 caggacga
//
LOCUS       DAKPJH010000239         1014 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.244, whole genome shotgun sequence.
ACCESSION   DAKPJH010000239 DAKPJH010000000
VERSION     DAKPJH010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.244"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            46..900
                     /locus_tag="OY092_002765"
     CDS             46..900
                     /locus_tag="OY092_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA processing protein DprA"
                     /protein_id="HCX1077625.1"
                     /translation="MVENIRTELFFLKQFGFNNTLLQEIFIKGLDPIKTIFSNEYLIR
                     ANIGRKFTDKDVLLANDYYKYREFKYYLFNKDEFFRDSKSKIYFKFDETNITKLLPEK
                     IMPLFMYTKGNNSLLDIKKQRVAIIGTRHPSNRAIKITKKITQKFLEDNYVIVSGLAE
                     GIDTISHKTAIKYNGNTIAILPTNFKNIYPKENIELAKEILDKGLLLTSIGPNENTYK
                     SSFLDRNKYIANISDIVVVTETNLKSGTMNTIRSASIAGKKILFVNQGDNLINNKIYE
                     FGGEMIDD"
BASE COUNT          439 a          102 c          151 g          322 t
ORIGIN      
        1 aaatttatat agatatattt aagaatataa agaaggggtc gtgctatggt tgaaaacata
       61 agaactgaat tatttttttt aaagcagttc ggttttaata ataccctttt acaagaaatt
      121 tttataaagg gactagatcc tataaaaact attttcagta atgaatatct aatacgtgct
      181 aatataggtc gtaaatttac tgataaagat gtattgttag ccaatgatta ctataaatat
      241 agagaattca aatattattt atttaacaag gatgaatttt tcagagatag taaaagtaaa
      301 atatatttta aatttgatga aactaacata actaagctat taccagaaaa aataatgcct
      361 ctctttatgt atacaaaagg gaataattca cttttagata ttaaaaaaca aagggtagct
      421 ataataggta ctcgtcatcc ttcaaataga gcaataaaaa taacgaaaaa aataactcaa
      481 aaattcttgg aagataacta tgtaattgtt agtggtttag cagaaggtat tgatactata
      541 tcccataaaa ctgctattaa atataatggt aatacaattg caatattacc aacaaatttc
      601 aaaaatattt atcctaaaga aaatatagag ttagcaaaag aaatattgga caaaggatta
      661 ttgctcacat ctattggacc aaatgaaaat acttataaat ctagtttttt agatagaaat
      721 aaatatatag caaatattag cgatatagtg gtagtaactg aaacgaattt aaaaagtgga
      781 actatgaata caatcagaag tgcgagtata gcagggaaaa agatcttgtt cgtaaatcaa
      841 ggagataatc taattaataa caaaatttat gaatttggtg gggaaatgat agatgactaa
      901 aaaaaacaaa agcattttaa tatcaaagtt attatttttt acagaaaaca ataaattaat
      961 tgaagaaaat ttaagaattg cagatctgtt ttatgaacat gatatagcat tggg
//
LOCUS       DAKPJH010000240         1010 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.245, whole genome shotgun sequence.
ACCESSION   DAKPJH010000240 DAKPJH010000000
VERSION     DAKPJH010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.245"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            115..657
                     /locus_tag="OY092_002766"
                     /pseudo
     CDS             115..657
                     /locus_tag="OY092_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251209.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
BASE COUNT          375 a          111 c          195 g          329 t
ORIGIN      
        1 tatggagaga taagtagtgg aacgaaaaaa ggggaaatat gtgcgcacag aaccatacgc
       61 tcggtggtgt gaggggacga ataatcaagt aatgattatt ctcctacttg atttaaacgt
      121 gtgattagtt ctgataaagt tgcagatatg aaaggtcaga tatttaaaca attgagatta
      181 gcgaatgaag aaatggaaaa tcgtttccga ttaatgacgg aaagcgaaga ttatcgaatt
      241 ggacatgatt ttagaagttt tgatatgcct gcatacttcg ttatttttga tgagtttaca
      301 gcagttacat caacattaga taaaaaagaa ttacaggaaa tgaatgatta tcttgtaaat
      361 attattatga aaggtcatca tgcaggtata tttatgtttt taacagcgca acgtcctgat
      421 gcagatgtca ttaaagggaa tgtacgtgac caattgggat tacgcgtatc tttaggtaat
      481 ttatcaactg atggttataa aatgatcttt ggccaaactg ataaggaatt tcaatcaata
      541 catgaatcag gtattggagg aggttatatc tctattttag gataatataa tgagcctgtt
      601 ttgtttgatg ttcctttaat ggaacaatat gattttgcga aagatgttga acaaattaat
      661 gcacgtcctc ttatgatatt taactataag tcaagtgaag agatattaaa ggaaataaca
      721 ggaagagaat gaatttaatg gttcatttag accttatttt gaagagataa aatgactatt
      781 ttcatttaaa aatagatatt gtataatgtg agcattaaaa aggaggaata tttatgtcag
      841 tcatcataaa tcgattaaaa gtacaaaata aaaaattagc tgggatatat gtttaagaat
      901 cctcaattat gtaaacattt ttcgtgaatt ataattgaaa tattaacttt aatcatgtat
      961 ccccaaagga gttacaatga ttaaaaaaag tttaatagtt ccactatata
//
LOCUS       DAKPJH010000241          998 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.246, whole genome shotgun sequence.
ACCESSION   DAKPJH010000241 DAKPJH010000000
VERSION     DAKPJH010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.246"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            264..368
                     /locus_tag="OY092_002767"
     CDS             264..368
                     /locus_tag="OY092_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077626.1"
                     /translation="MFKVNYSILSYYPEYNIAVSWQRLREGKTIKNKI"
     gene            497..748
                     /locus_tag="OY092_002768"
     CDS             497..748
                     /locus_tag="OY092_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077627.1"
                     /translation="MLTLIKLKEDEQVIIYEYIPEDDISNGKGSVTFNKKDAEVIDFS
                     LSEIENEEYFMLYRNKSFSVVRDFIEKQEFPENYKIAWY"
     gene            824..998
                     /locus_tag="OY092_002769"
                     /pseudo
     CDS             824..998
                     /locus_tag="OY092_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485350.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
BASE COUNT          390 a          118 c          167 g          323 t
ORIGIN      
        1 ttcatttttt caatgtcgac ttcgaagggg gcattttcat taaattgtta tagcttttta
       61 tatttgtata atgaacatat aagtttaaga aggtgcgagt gaaggaaata aaaaagctca
      121 aatgtaccaa attgttaatc ttaataaatc tctactttat aaagattgaa tggacattcg
      181 agcgttaatc agtcaggagg gactttccct cctacaattt aataataata cttgcttcac
      241 cactatacaa ggagtgagtt gttatgttca aagtgaatta ttcgatttta agttattatc
      301 cagaatataa tatcgcagta agttggcaac gtttaagaga aggaaaaaca ataaaaaaca
      361 agatttaata ctgctgcgtc atgaggcgct tgaacattat ttgatgaata agtataattt
      421 caactatgat tatgcacata aaattgtatc aaaaaaatac gattattcaa tttttataaa
      481 aaagaaggtg gattaaatgc ttacattaat aaaattgaaa gaagatgaac aggttataat
      541 atatgaatat atacctgaag atgatataag taacggtaaa ggttcagtaa cttttaataa
      601 aaaagatgca gaggttatag atttctcatt atctgaaata gaaaatgaag aatattttat
      661 gttatatcgt aataagtctt tttctgtagt aagagacttt atcgagaagc aagaatttcc
      721 cgaaaattat aaaatagcat ggtattaaag catcctttct acacagataa agagaaagcg
      781 atgctatttt tatatgcttt tttcattatt cgttgaaaaa gaagagtcac aaaagttaac
      841 atatttaaaa gaacttggtg aagatggcga atataaatat gttgccaaaa tagatagtaa
      901 aacatctaaa ttatgtcatt cactcaacgg aaaaatattt aaagttaaag atatgatacc
      961 aggtgtgaat gcgccaccta tgcatccttg gtgtagaa
//
LOCUS       DAKPJH010000242          991 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.247, whole genome shotgun sequence.
ACCESSION   DAKPJH010000242 DAKPJH010000000
VERSION     DAKPJH010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.247"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..311)
                     /locus_tag="OY092_002770"
     CDS             complement(<1..311)
                     /locus_tag="OY092_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HCX1077628.1"
                     /translation="MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLL
                     AGLIPFIPIKFSFFKFNNLNNQEPTVESNSHNLNPNINTTKPVHEFTTDIHKFNWDSI
                     D"
     gene            418..>991
                     /locus_tag="OY092_002771"
     CDS             418..>991
                     /locus_tag="OY092_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HCX1077629.1"
                     /translation="MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALD
                     TKSGKEVKFNADKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEK
                     YVGKDITLKELIEASMKYSDNTANNKIINEIGGIKKIKKRLKKLGDKVTNPVRYEIEL
                     NYYSPKSKKDTSTPAAFGKTLNKLIANGKLS"
BASE COUNT          415 a          114 c          141 g          321 t
ORIGIN      
        1 ttatctattg aatcccaatt aaacttatgg atgtctgttg taaactcatg aacaggttta
       61 gtggtattta tgttaggatt caaattgtgt gaattacttt caactgtggg ctcttgatta
      121 ttcaaattat taaatttaaa aaaagagaat ttaataggga tgaaaggaat taatcctgca
      181 agaagagtta gataccaaac tttataattt aacatataat taaaatagcg ttttaatatg
      241 tacctaaaaa ataataacaa tagaaatata aaacaaaagc ttactatgct cattattaat
      301 aacttagcca tttcaacacc ttctttcaaa tatttataat aaactattga cgcgaatatt
      361 acaattgtaa tattattgat ttatagaaat tacaactgta atattggagg gtatattttg
      421 aaaaagttaa tacttttaat tgcaattgct ttagttttaa gtgcatgtaa ttcaaccagt
      481 tcacatgcta aagagttaaa taatttagaa aagaaatata atgctaatat tggtgtctat
      541 gcattagata ctaaaagtgg taaggaagta aaatttaatg ccgataagag atttgcctat
      601 gcttcaactt caaaagcgat aaatagtgct attttgttag aacaagtacc ttataataag
      661 ttaaataaaa aagtacatat taacaaagat gatatagttg cttattctcc tattttagaa
      721 aaatatgtag gaaaagatat cactttaaaa gaacttattg aagcttcaat gaagtatagt
      781 gataatacag caaacaataa aattataaac gaaatcggtg gaatcaaaaa aattaaaaaa
      841 cgtttaaaaa aattgggaga taaagtaaca aatccagtta gatatgaaat agaattaaat
      901 tactattcac caaagagcaa aaaagatact tcaacgcctg ctgctttcgg caagacttta
      961 aataaactta tcgcaaatgg aaaattaagc a
//
LOCUS       DAKPJH010000243          984 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.248, whole genome shotgun sequence.
ACCESSION   DAKPJH010000243 DAKPJH010000000
VERSION     DAKPJH010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.248"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..647
                     /locus_tag="OY092_002772"
     CDS             <1..647
                     /locus_tag="OY092_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HCX1077630.1"
                     /translation="NLDDFYDKEGFRDQEFKKGDKGTWIVNSEMVIEPKGKDMETRGM
                     VLYINRNTRTTKGYYFISEMTDDSNGRPKDDEKRYPVKMEHNKIIPTKPLPNDKLRKE
                     IENFKFFVQYGDFKDINDYKDGDISYNPNVPSYSAKYQLKNDDYNVKQLRKRYDIPTN
                     KAPKLLIKGDGDLKGSSVGSKNLEFTFVENKEENIYFTDSVQYTPSEGTSYESN"
     gene            complement(651..773)
                     /locus_tag="OY092_002773"
     CDS             complement(651..773)
                     /locus_tag="OY092_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077631.1"
                     /translation="MSYIIKFTFKFFEMATYISQLTLDIELVSSELLVILPGFI"
BASE COUNT          409 a          133 c          178 g          264 t
ORIGIN      
        1 aaaatctcga tgatttttac gataaagaag gctttcgaga tcaagaattt aaaaagggtg
       61 ataaaggtac ttggatagtt aattctgaaa tggtaatcga gccaaaaggt aaggatatgg
      121 aaacgagagg aatggtgctc tatatcaatc gcaatactag aaccacaaaa gggtattatt
      181 ttataagtga aatgacagat gacagtaacg gcaggccaaa ggatgatgaa aaaaggtatc
      241 cggtaaaaat ggaacataat aaaatcatac caacgaagcc actaccgaat gacaagttaa
      301 gaaaagaaat cgaaaacttt aaattctttg tacaatacgg tgactttaaa gatattaatg
      361 attataaaga tggtgacatt tcatataatc ctaatgttcc aagttattcc gcaaaatatc
      421 aattgaaaaa cgatgactac aatgtgaagc aacttcgaaa aagatatgat attccaacca
      481 acaaagctcc gaaattatta ataaaaggtg atggtgattt aaaaggctca tctgtaggat
      541 caaaaaatct agaatttacc tttgtagaaa ataaagaaga aaacatttat tttacagatt
      601 ctgtacaata tactccaagt gagggtacaa gttatgagtc aaactgaata tcaaataaaa
      661 cctggtaata taacaagtaa ctctgaagaa acaagttcga tatctaaagt gagctgtgaa
      721 atataggtag ccatttcaaa aaatttaaag gtgaatttga taatgtagct caaggagatt
      781 gggttaaaaa ggcgaagaat gaactggatg atattagtaa gaaataaaaa aatattcaaa
      841 gaacggaagt ttaatattct agccgattcc tgaaactaag acagcttgtg ttcattcatg
      901 ccattatcaa tataatcact acaacaaaaa agcttctaat gtgatacagg aacctcatat
      961 tccgtatcat gttagaagct ttta
//
LOCUS       DAKPJH010000244          953 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.249, whole genome shotgun sequence.
ACCESSION   DAKPJH010000244 DAKPJH010000000
VERSION     DAKPJH010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.249"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..424
                     /gene="perR"
                     /locus_tag="OY092_002774"
     CDS             <1..424
                     /gene="perR"
                     /locus_tag="OY092_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HCX1077632.1"
                     /translation="EHELEESIASLRQAGVRITPQRQAILRYLISSHTHPTADEIYQA
                     LSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIICEQCGKIVD
                     FQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK"
BASE COUNT          391 a          120 c          134 g          308 t
ORIGIN      
        1 tgaacatgaa ctagaagaat caattgcatc attgcgacaa gcaggcgtaa gaattacacc
       61 tcaaagacaa gcaatattac gttatttaat ttcttcacat actcatccaa cagctgatga
      121 aatttatcaa gcactttcac ctgattttcc aaatataagt gttgcgacaa tatataataa
      181 cttaagagtg tttaaagata ttggaattgt aaaagaatta acatatggag actcatcaag
      241 tcgattcgac tttaatacac ataatcatta tcatattata tgtgaacaat gtggtaagat
      301 tgttgatttt caatatccac agttaaatga aattgaaaga ttagctcagc atatgactga
      361 ctttgacgta acacatcatc gaatggaaat ttatggagtt tgtaaagaat gccaagataa
      421 ataatttaac tttggtagta tgacaaatta aaaaagcgtt agcttacttc atataagtaa
      481 gtgtaatatt taagaagtta aacgacatga aagttgttta acttcttttt tatgctcatt
      541 ctgaaaaata tttaaataga agaaaagaac attttaacta cggaagtggt attaactaat
      601 aactagtatc ctttataaat aaacataaaa atattcaaac gaaggttcac taaataacta
      661 tccataaagt gaggataagt ttgtttgtaa aactgaagta aaaagcgtaa ggaattacac
      721 tttaaataca tatagtactt acgaatagaa aataatccct tcaacagtaa tttttaaaca
      781 aaaataagtg ttgttttatg ttgactctac tagaataact tgatattata taaaagtcgt
      841 caaacggcac taatatttaa aaaacaaatg ttttaagttg ttgatttaaa atattaacaa
      901 agtgtaaatt tgactattga aattcgaaca aatacataat aaaataatat ttg
//
LOCUS       DAKPJH010000245          952 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.250, whole genome shotgun sequence.
ACCESSION   DAKPJH010000245 DAKPJH010000000
VERSION     DAKPJH010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.250"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            7..654
                     /locus_tag="OY092_002775"
     CDS             7..654
                     /locus_tag="OY092_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HCX1077633.1"
                     /translation="MKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITH
                     YMGIPIEESFLKLADRPLDEVALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQ
                     GKKLFVVSSKKSDVLERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNS
                     QQTVYIGDSTFDVEMAQHAGVPSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL"
BASE COUNT          360 a          125 c          166 g          301 t
ORIGIN      
        1 ttaatattga agtttgacaa ttatattttt gattttgatg gtacgttggc agacacgaaa
       61 aaatgtggtg aagtagcaac acaaagtgca tttaaagcat gtggcttaac ggaaccatca
      121 tctaaagaaa taacgcatta tatgggaata cctattgaag aatcattttt aaaattagca
      181 gaccgaccat tagatgaagt agcattagca aagttaatcg atacatttag acatacatat
      241 caatctattg aaaaggacta tatttatgaa tttgcgggta taactgaagc cattacaagt
      301 ttgtataacc aagggaaaaa acttttcgtg gtgtctagta agaagagtga tgtattagaa
      361 agaaatttat cggctattgg attaaatcac ttgattaccg aagctgttgg atccgatcaa
      421 gtaagtgcat ataaaccaaa ccctgaaggc atacacacaa ttgtgcaacg ctacaattta
      481 aatagccaac aaacggttta tattggtgat tcaacatttg atgttgagat ggcgcaacat
      541 gctggtgtac catctgcagc agtaacatgg ggagcacatg atgcaaggtc attacttcat
      601 tcaaatccag attttataat caatgatcca tcagaaatta atacagtatt ataaaatttg
      661 ttaaaacaga gaataccatg gttaaaatgt atattcataa atattagatt atacatagaa
      721 atatttcgct ttagattagg aatttaaaat aaatatttat taaacatcat gaatttttaa
      781 agagtgatgt ctgattcgtt gatcatttat ttttgtacaa ataaattaaa gtaaagacaa
      841 agttattgaa gtaaatcgaa tataaacatt taaatatgat gtcgaaaatg gcgatagcat
      901 atgacttaca tgaagttgtg tgctatcgct atttttagtt ataattccaa aa
//
LOCUS       DAKPJH010000246          937 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.251, whole genome shotgun sequence.
ACCESSION   DAKPJH010000246 DAKPJH010000000
VERSION     DAKPJH010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.251"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(117..809)
                     /locus_tag="OY092_002776"
     CDS             complement(117..809)
                     /locus_tag="OY092_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HCX1077634.1"
                     /translation="MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAP
                     YSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAEETGWFVWNMATYDLREAVNLSS
                     KALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDLVSTVDIVI
                     GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPSASKEELAGLE
                     GRNFDNQSDDKE"
BASE COUNT          274 a          200 c          133 g          330 t
ORIGIN      
        1 attattcttt aaaattataa atatagcgac atatcgcttc ccggttttga aatataaaaa
       61 tacatcgaaa ctaatttcaa cgtgtagttt cgatgtattg aaaatgattg aattcattat
      121 tccttgtcat ctgattgatt atcaaaattt cttccttcta aacctgcaag ctcttcttta
      181 gaagctgatg gtgctttcat ttcaaatatt tcattcacaa ccgtgtaatc ataatatcct
      241 aacctcgcaa taggtttaat cgacttaatg tctaatttac cattatcaag aatgacctta
      301 tcgtcaatat gaacctgagc aactcttcct ataacaatat caactgttga tacaaggtct
      361 cctgtcggaa tacgaatcgt ttgaacgtac tcacattcaa aatgtactgg cgattctttg
      421 actcgataac ctggtgcttc tatacatgct tctttcgtca cacctgcata ttcaaattca
      481 tcctcttcag gtggtagtgc cttcgacgat aaattaactg cttctcttaa atcatacgtt
      541 gccatattcc acacaaacca ccctgtctct tcagcatttt tcactgtatc tttacgttcg
      601 tgatcaccaa gaacggattg atttgctgcg aacataacca taggcggatc ccaagttaag
      661 ttttgatact gactataagg tgctaaatta tctttcccat ctttcgatac agtagagatc
      721 caccctattg gacgtggtac tgtactactt ttaaatggat cgtgtggtaa gccatgactc
      781 cttacacctt gcttcggcga ataattcatt ctatcctcac cccttattag taattacatt
      841 taaggttacg ccctctttac ataagcgtct aatataaata atcaatttat ttataagtag
      901 aaactatata tgacgtggtt tcttataatt tgcgttc
//
LOCUS       DAKPJH010000247          936 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.252, whole genome shotgun sequence.
ACCESSION   DAKPJH010000247 DAKPJH010000000
VERSION     DAKPJH010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.252"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(167..559)
                     /locus_tag="OY092_002777"
     CDS             complement(167..559)
                     /locus_tag="OY092_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5084 family protein"
                     /protein_id="HCX1077635.1"
                     /translation="MKYTWWILLTIAGILSLTSVYGFILCLGSFGMLALNVMWLFVYT
                     PHKNSKALESISKPTIILSIIGTYAVFIFMSILFYFVMKARFMEIGIKLYGEPFNMFG
                     IPLFIIGIILFTIGTVFVYKIQQSRLKQ"
     gene            complement(561..>936)
                     /locus_tag="OY092_002778"
     CDS             complement(561..>936)
                     /locus_tag="OY092_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HCX1077636.1"
                     /translation="KVTSLIGIIIQSFLTLLFLIFLILSATGIIQPELTTTVNGEQTI
                     QSPETAQATFVTIFAILFVVSLASDLLGIIAMKKLFVNNRASGILYIIGAVISANLLT
                     FIAWLISGISVLRYNKIGKEVS"
BASE COUNT          345 a          153 c          107 g          331 t
ORIGIN      
        1 attacatttt tatattttaa tattgaaaaa atcacatttt acattcattg tcattatctt
       61 tttatcttca aattgcttga agtcatttag attcaactac atctattatg tataaatcat
      121 taggacggat ttcttttaaa cccgtcccat gttaaattaa tatattctat tgctttaatc
      181 ttgattgctg tattttataa acgaatactg taccgattgt aaataaaatg atgccaataa
      241 tgaataatgg tattccaaac atattaaaag gttcaccgta aagttttatt ccaatttcca
      301 taaacctagc tttcattacg aagtaaaata agatagacat aaatataaat actgcatatg
      361 tcccaatgat tgataaaatt atcgttggtt ttgatataga ttcaagtgct ttagaatttt
      421 tatgcggtgt ataaacaaat agccacatga cattcagtgc caacattcca aagctaccta
      481 aacataaaat aaatccataa acacttgtta aacttaaaat ccctgcaatt gttaaaagta
      541 tccaccaagt atatttcatg ctatgacact tcttttccta ttttgttata tcttaaaaca
      601 gaaatcccac ttattaacca agcaataaat gttaataaat tggcgctgat tactgcacca
      661 ataatataca aaatgccact cgctctatta ttcacaaaca actttttcat agctataatg
      721 cctaataaat ctgaagctaa agaaacaaca aataatattg caaatattgt cacgaatgtt
      781 gcttgagcag tttctggact ttgtatagtt tgttcaccat taacagttgt ggtcaattct
      841 ggctgtataa tccctgttgc tgataaaatt aaaaatatta aaaataacaa tgttaaaaaa
      901 ctttgaataa taattccaat taaagacgtc actttg
//
LOCUS       DAKPJH010000248          895 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.253, whole genome shotgun sequence.
ACCESSION   DAKPJH010000248 DAKPJH010000000
VERSION     DAKPJH010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.253"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>895
                     /locus_tag="OY092_002779"
     CDS             <1..>895
                     /locus_tag="OY092_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCX1077637.1"
                     /translation="KFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYE
                     VLKQLCTTYKMVLDFYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDM
                     SEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLPTRYIWGIYEPQSDDQNMNETRL
                     RSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
                     AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDG
                     ELEYFERKIHKSDTPPENPVND"
BASE COUNT          352 a          130 c          172 g          241 t
ORIGIN      
        1 aaatttgaga aaaagacaac ttcagaagca ttgaaagatg tgttgagcga tacaggttgg
       61 gaagtttctg aacaaaccga atacgatggc ttacgtacta cgtcatggac ttcttatcaa
      121 actagatatg aagttttaaa gcaattatgt acaacctata aaatggtatt ggatttttat
      181 atagagctta gttctaatac cgtcaaaggt agatatgtag tactcaaaaa gaaaaacagc
      241 ttattcaaag gtaaagaaat tgaatatggt aaagatttag tcgggttaac taggaagatt
      301 gatatgtcag aaatcaaaac agcattaatt gctgtgggac ccgaaaatga caaaggaaag
      361 cgtttagagt tagttgtgac tgatgacgaa gcacaaagtc aattcaactt acctacccgt
      421 tatatttggg gaatatacga acctcaatca gatgatcaaa atatgaatga aacacggttg
      481 cgttctttag ccaaaacaga gttaaataaa cgtaagtcgg cagttatgtc atatgagatt
      541 acttctactg atttggaagt tacgtatccg cacgagatta tatcaattgg tgatacagtc
      601 agagtaaaac atagagattt taacccgcca ttgtatgtag aggcagaagt tattgccgaa
      661 gaatataaca taatttcaga aaatagcaca tatacattcg gtcaacctaa agagttcaaa
      721 gaatcagaat tacgagaaga gtttaacaaa cgattgaaca taatacatca aaagttaaac
      781 gataatatta gcaatatcaa cactatagtt aaagatgttg tagatggtga attagaatac
      841 tttgaacgca aaatacacaa aagtgataca ccgccagaaa atccagtcaa tgata
//
LOCUS       DAKPJH010000249          882 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.254, whole genome shotgun sequence.
ACCESSION   DAKPJH010000249 DAKPJH010000000
VERSION     DAKPJH010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.254"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            10..822
                     /locus_tag="OY092_002780"
     CDS             10..822
                     /locus_tag="OY092_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077638.1"
                     /translation="MGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQML
                     SSNNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFI
                     IVSDIGLINVDVKSWGEKTFYHFDVPDEHDTEMSNSNIEKVVGHYISQQYHDQFNSSR
                     KSIYTFTETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQKFNFKVQSTGVIYFSDG
                     TVNIIQGSEERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK"
BASE COUNT          337 a          124 c          142 g          279 t
ORIGIN      
        1 gtagcattaa ttggtatatt agttttaaat caaaggtata gtaatagtaa aatagatacc
       61 gaagtttatg caagaaagca acttattaaa aagaacaaag cattaagtgc agaaaatgct
      121 gaattaagaa gtcaaatgct gagttctaat aatgatgttg gccaccatgc atacaaaaat
      181 gctaaaagag aattacgcaa gattttagat agctatctcg aaaatggtaa attaaaatat
      241 tacgatatta tcgttacaag caatttagct actaaacatc cgtttttcga gtatgcacgt
      301 tcatttgatt ttatcattgt ttcagatatc ggtttaataa acgttgatgt aaaaagctgg
      361 ggtgaaaaaa cattttatca ctttgatgta cctgatgagc atgatacaga aatgagcaat
      421 agtaatattg aaaaagttgt cggtcattac attagccagc aatatcatga tcagtttaat
      481 tcatcaagaa agtctatcta tacttttaca gaaacagttc aaccaaatcg tgttatttat
      541 gatttttatg attatgatcc gtatcaatta gcagcaaata atgctaaagc attaaaggat
      601 catattgaac aaaaatttaa ctttaaagtc caaagtaccg gtgttattta ctttagtgat
      661 ggtacagtta atatcattca aggttctgaa gaaagagata aatatgttga tacagtttca
      721 acaaaatctt cgttacgacg tattattagc gaagccatag agctatctaa acacccttta
      781 aataaagaac aggttgatca aatcactgct atattcaagt aaaatcaaag gcataataat
      841 ccattacgct cgatacgcac tatggttatt atgcctttaa at
//
LOCUS       DAKPJH010000250          881 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.255, whole genome shotgun sequence.
ACCESSION   DAKPJH010000250 DAKPJH010000000
VERSION     DAKPJH010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.255"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>881
                     /locus_tag="OY092_002781"
     CDS             <1..>881
                     /locus_tag="OY092_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HCX1077639.1"
                     /translation="KIDFVQLKEQQPEIEGIEAKLKLLQDITNLLNYIENREKIETKI
                     ANSKKDISKTNNKILNLDCDKRNIDKEKKMLEENGDLIESKISFIDKTRVLFNDINKY
                     QQSYLNIERLRTEGEQLGDELNDLIKGLETVEDSIGNNESDYEKIIELNNTITNINNE
                     INIIKENEKAKAELDKLLGSKQELENQINEETSILKNLEIKLDRYDKTKLDLNDKESF
                     ISEIKSAVNIGDQCPICGNEIQDLGHHIDFDSIAKRQNEIKEIEANIHAIKSNIAVHN
                     SEIKFVNEKISNINIKT"
BASE COUNT          406 a           83 c          142 g          250 t
ORIGIN      
        1 aaaattgatt tcgttcaatt gaaagaacaa caacctgaaa tagagggaat tgaagctaag
       61 ttaaagttgt tacaagatat tacaaaccta ttgaattata ttgaaaatag agaaaaaatt
      121 gaaactaaaa ttgctaatag caaaaaagat atttctaaaa ccaataataa aatattgaat
      181 cttgattgtg ataagcgaaa catagacaaa gagaaaaaaa tgttagaaga aaatggagat
      241 ttaattgaaa gtaaaatctc ttttattgat aaaactagag tattatttaa cgatattaat
      301 aagtatcaac aaagttatct caatattgaa cgcttgagaa ctgagggtga acaattaggt
      361 gatgaattaa atgatctaat taaaggttta gaaacggtcg aagattcaat aggtaataac
      421 gaaagtgatt acgagaaaat tatcgaacta aataatacga taacgaacat aaataatgaa
      481 attaatataa ttaaagaaaa tgaaaaagct aaagctgaat tagataaact attaggtagt
      541 aagcaagagt tagagaatca aattaatgaa gaaacatcta tattgaagaa tctcgaaata
      601 aaattagatc gctacgataa aacaaaattg gacttaaatg ataaagaaag ctttataagt
      661 gaaattaaat ctgctgtaaa tattggagat caatgtccga tatgtggtaa tgaaattcag
      721 gatttagggc atcatattga ttttgacagt attgctaaac gtcaaaatga aattaaagaa
      781 attgaagcaa atatccacgc tataaaatcg aatattgctg tgcataattc tgaaattaaa
      841 tttgttaatg aaaaaatatc gaatattaat attaaaacgc a
//
LOCUS       DAKPJH010000251          879 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.256, whole genome shotgun sequence.
ACCESSION   DAKPJH010000251 DAKPJH010000000
VERSION     DAKPJH010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.256"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..647)
                     /locus_tag="OY092_002782"
     CDS             complement(<1..647)
                     /locus_tag="OY092_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077640.1"
                     /translation="MSIPINLPTNSTMINELCTLQSRTINIKGEVLITEIYDDYFLKN
                     DEWHISAFNKFEQFQDSIKNYKDKRKNIFFRIKSENLNLEFKYLFLKLIVKEDWSLSN
                     VFNTGAVKLNKIAEFFNEVYPNLNSLLDCDINMLEKYWFSWLTKNNIPIKRKSSTIVF
                     GDYEHKSGLASFLKNMYINLNKFIDKREEWEKDKWDIRNLEKYGLSYNKTLTGNY"
     gene            complement(650..>879)
                     /locus_tag="OY092_002783"
     CDS             complement(650..>879)
                     /locus_tag="OY092_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCX1077641.1"
                     /translation="RLKHKTSINVHPHLFRHTHATVFYNETKDIKQVQERLGHSNIQT
                     TINLYVHPTEEDIREDWNKVKHQFQVFNKGE"
BASE COUNT          290 a          130 c           94 g          365 t
ORIGIN      
        1 aaataattac cagttagtgt tttattataa ctcaatccat atttttctaa atttctaata
       61 tcccatttat ctttttccca ttcttctcgc ttatcaataa atttatttag attaatatac
      121 atattcttta aaaaagaagc tagtccactt ttatgttcat aatcaccaaa aactattgtt
      181 gatgattttc tttttatagg tatattattt ttagtcaacc aactaaacca gtacttttct
      241 aacatattaa tatcacaatc tagtaaagaa tttaaatttg gataaacttc attaaagaac
      301 tcagcaatct tgttaagttt cactgctcca gtattaaata cattagataa agaccaatcc
      361 tctttaacta taagtttcaa aaaaaggtat ttaaattcta aattcaaatt ttcactttta
      421 atcctaaaga aaatattttt tcttttgtct ttatagttct tgatactatc ttgaaattgc
      481 tcgaacttgt taaaagctga aatgtgccat tcatcatttt ttaaaaagta atcatcatat
      541 atttcagtta ttagcacttc tccttttatg tttatagttc tactttgtaa tgtacataat
      601 tcattaatca tagtactgtt tgtaggcaaa ttaattggta ttgacatagt tattcccctt
      661 tattaaaaac ttgaaattga tgcttaactt tattccaatc ttcacgtata tcttcttcag
      721 tgggatgaac atataaatta atagtcgttt gtatattact atgaccgagt ctttcttgaa
      781 cttgtttaat atccttagtt tcattataaa aaacagttgc atgtgtatgg cgaaataaat
      841 gggggtgaac atttatagat gttttatgtt ttagccttt
//
LOCUS       DAKPJH010000252          870 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.257, whole genome shotgun sequence.
ACCESSION   DAKPJH010000252 DAKPJH010000000
VERSION     DAKPJH010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.257"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..216)
                     /locus_tag="OY092_002784"
     CDS             complement(<1..216)
                     /locus_tag="OY092_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077642.1"
                     /translation="MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDT
                     ELIINRILKQLLSAEQHGLLALDFFNHD"
     gene            343..786
                     /locus_tag="OY092_002785"
     CDS             343..786
                     /locus_tag="OY092_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCX1077643.1"
                     /translation="MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMI
                     CSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNTELLYVEPQFRKLGIATQLKIA
                     LEKWAKTMNAKRISSTIHKSNLPMISLNKDLGYQVSHVKMYKDID"
BASE COUNT          340 a          100 c          144 g          286 t
ORIGIN      
        1 atcgtgattg aaaaaatcta aggctaataa accatgttgt tctgcgctta ataattgttt
       61 aagtatacgg ttaataatta actctgtatc atgaggattg acgcgaaagt cagagcgcat
      121 ataagtcata taattctcga agatttctct atcagtattg cttaatctta atgatttaac
      181 attattttct tttgttaatt gcgcagtact tttcattgtt aattaagcgc tcctttaaaa
      241 atgtttaatt ccaaattaaa atggaaatga ttttatagta ttaataaggt caatcatatc
      301 atattaaacg cataaatata acgattaata ttggagagga aaatgaggac acttaataaa
      361 gatgaacata attatatcaa gcaaatagct aatatacatg agacattatt gtcgcaagta
      421 gaatccaact ataaatgtac taaactgagt attgctctta ggtacgagat gatatgttca
      481 agattagaac atacaaatga taaaatttat atatatgaaa atgaaggtca attaatagcg
      541 tttatttggg gacattttag taatgaaaaa agtatggtta acactgaact gctatatgtt
      601 gaaccacaat ttcgcaaact gggaatagct acgcaactga agattgcgct tgaaaaatgg
      661 gcaaaaacta tgaatgcaaa gcgaataagc agtacaattc ataaaagtaa tttaccaatg
      721 atatctttga ataaagattt aggttatcaa gtgagtcatg tgaaaatgta taaagatatt
      781 gattagaatt aggattatgt tgctaattca tgttaaaatt aaaaaagatt taatgacgtt
      841 aaggagtttt atatgaagaa attaatcatc
//
LOCUS       DAKPJH010000253          859 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.258, whole genome shotgun sequence.
ACCESSION   DAKPJH010000253 DAKPJH010000000
VERSION     DAKPJH010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.258"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(83..826)
                     /gene="sarU"
                     /locus_tag="OY092_002786"
     CDS             complement(83..826)
                     /gene="sarU"
                     /locus_tag="OY092_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarU"
                     /protein_id="HCX1077644.1"
                     /translation="MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFY
                     YKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNEADERCIFVSVTPIQRK
                     KIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFL
                     DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVL
                     IKINKIQYNTIKSIFTDTSKILKPRKFFF"
BASE COUNT          285 a          109 c          101 g          364 t
ORIGIN      
        1 taattatgta tttttattta tactaaattg agaagtatta tgattgctta tttattttat
       61 caagaggtaa atctgtttaa atttaaaaga aaaattttct tggtttgaga atcttggaag
      121 tatctgtgaa tatgctttta atagtgttat attgtatttt atttattttg attaacacaa
      181 tcctttcatc tgcaagggat cgttctttga ttagcatacc tttattattt aatctattaa
      241 ctgacctaac aatttgagga tacataaatc taatactttc aaacaaatct tttaaattta
      301 gtatctcatt ttttcgagat gatattacat ataagataga taaatcaaga aatgttaaat
      361 taaatcgata ttttaaaaaa tcttttgagt acataatgtt cataaaaagt ataaaaaatt
      421 ctttgctata ttttggagcc cattgatatt ttatgtagtc tctttcctta ttaaatcctt
      481 taattatttt atctaactca ttaataacac aagcaatctt tttacgttgt attggagtaa
      541 ctgaaacaaa aatacagcgt tcatctgctt cgtttctaga cttatttata aatccttttt
      601 tagatagtga cttaatgttc tttacaacat cagattgttt gtaaagtatg tcaccaatga
      661 tttcttttag tgaaatactg tgttcatttt tgtaataaaa atatgctaat atcaacaatt
      721 cttttaatga taatttatat tgttgcttta actcttgagt gagaaaaaat atgtacgctt
      781 ctacatttat gaatttattg accttttcga aagtttgata gtccacctta cattctccta
      841 ctattttctg atgtcccaa
//
LOCUS       DAKPJH010000254          853 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.259, whole genome shotgun sequence.
ACCESSION   DAKPJH010000254 DAKPJH010000000
VERSION     DAKPJH010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.259"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            130..651
                     /locus_tag="OY092_002787"
     CDS             130..651
                     /locus_tag="OY092_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001627793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077645.1"
                     /translation="MKRKVLVLTMGVLCATQLWHSNHANALVTESVETNFVVKDSGNN
                     NILQTHTEITTEEKFSIVEKSQLNTLKSLSNDNYIEYDLHTNQTGIKKGWLYGYSEID
                     SSHFTDCDKRAIRRDHVKEAQSLINDYKDTQSYEDLAKATAKVSTLSQSHQNYLNKQI
                     DKVNNKIEKTEKR"
BASE COUNT          345 a          120 c          133 g          255 t
ORIGIN      
        1 agattattgt taatagtttg ttcatcgcaa gttaattatt atttctaaaa aattggtata
       61 taatttcgat ggcgaagaaa acagggtgaa aaagtcggtt ttacaatcaa tgcaaataag
      121 gagtaaaaaa tgaaaaggaa agtactagta ttaacaatgg gcgtactttg tgcgacgcaa
      181 ttatggcatt ctaatcacgc aaacgcatta gtgacagaga gtgttgaaac taattttgtt
      241 gtaaaagatt cgggtaataa taatatttta caaacccata ctgaaattac tactgaggag
      301 aaattttcaa tagtagaaaa gagccaatta aatacactaa aatcactatc taatgacaac
      361 tacatagaat atgatttaca tactaatcaa acaggcatta aaaaaggttg gttatatggc
      421 tatagtgaaa ttgactcatc acatttcaca gactgtgaca aacgcgctat tagacgtgat
      481 catgttaaag aagcacaaag cttaattaac gattataaag atacacaaag ttatgaagat
      541 ctcgctaagg caactgcaaa agtaagtaca cttagtcagt ctcatcaaaa ttatttgaat
      601 aaacaaattg ataaagtgaa taataagata gagaaaactg aaaaacgcta atccaaagta
      661 aattataagt tatacatctc gtttttaaat gacaatttat ccccgtaaat attataaata
      721 atcttttcaa attccacata gatatagaga cactaataaa cctctttgtc tcgatatgat
      781 agtctgcaac gattcatgtt gtaggctttt taattttaca aataaggcta aatatataag
      841 ttctgacacc taa
//
LOCUS       DAKPJH010000255          828 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.260, whole genome shotgun sequence.
ACCESSION   DAKPJH010000255 DAKPJH010000000
VERSION     DAKPJH010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.260"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(60..575)
                     /locus_tag="OY092_002788"
     CDS             complement(60..575)
                     /locus_tag="OY092_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HCX1077646.1"
                     /translation="MKINTEFKGNNIPYEYAAGADISDLINGNPIKSFPFEITELPKD
                     TKYLAWSLIDYDAIPVCGFAWIHWSVANVSVTRDSISIKPDLSRTKGDYVQGKNSFTS
                     GLLADDFSEIENHYVGPTPPDQDHQYELTVYALDHSLNLKNGFYLNEFLKEVNQHKID
                     QTSINLIGRKI"
     gene            complement(553..>828)
                     /locus_tag="OY092_002789"
     CDS             complement(553..>828)
                     /locus_tag="OY092_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001610400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077647.1"
                     /translation="TIAILFLGISSGLTRPQTINELSNSSNLAAILNYAETLYFIFNI
                     AFLLIGGYLYSIGTIQYLMLFMSLLTFIYLLTLFYLRRDQHENQHRI"
BASE COUNT          281 a          124 c          117 g          306 t
ORIGIN      
        1 aaacctttgt ttctttgtac ttttaattga acaattttat attgatgaga tatttagtat
       61 taaatttttc ttcctataag gttaatactt gtttgatcaa ttttatgttg atttacttct
      121 tttaaaaatt cattcaagta gaacccattc ttcaaattta aagaatgatc taacgcataa
      181 actgttaatt catattgatg atcttgatca ggtggtgtag gtcctacata gtgattttct
      241 atttctgaaa aatcatcagc taacaaacca ctagtgaagc tatttttacc ttgtacatag
      301 tcgccctttg ttcttgataa atcaggttta attgaaattg aatcacgagt gacacttaca
      361 ttagcaacgc tccaatgaat ccatgcaaat ccgcaaactg gtattgcatc ataatctatc
      421 agagaccatg caagatattt agtatctttt ggaagttctg ttatttcaaa cgggaatgat
      481 ttaattggat tgccatttat taaatcactt atatctgcgc ctgccgcata ttcatatggt
      541 atattatttc ctttaaattc tgtgttgatt ttcatgttga tctctcctta aataaaataa
      601 tgttagtaaa tatataaacg tcaataatga cataaataac attaaatatt gaatagttcc
      661 aattgaatat aggtaaccac caataagtaa aaatgctata ttaaaaataa agtacagtgt
      721 ttccgcgtaa ttaagtatag ctgctaagtt actactattt gaaagttcat taattgtctg
      781 aggacgagtt aagcctgaag aaatccctaa aaataaaata gcgattgt
//
LOCUS       DAKPJH010000256          826 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.261, whole genome shotgun sequence.
ACCESSION   DAKPJH010000256 DAKPJH010000000
VERSION     DAKPJH010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.261"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>826
                     /locus_tag="OY092_002790"
     CDS             <1..>826
                     /locus_tag="OY092_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077648.1"
                     /translation="PDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFIN
                     LSIQHASLLSEATELLNSEYLVDNDLKADLQASLDAVIDVYNQIKNNLESMTPETATI
                     GRLVDTKTLFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEALEIIATKF
                     GLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAE
                     RTTLKGEIKDKVTLNEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALK"
BASE COUNT          328 a          110 c          162 g          226 t
ORIGIN      
        1 ccctgatgtt gctgtcttgc gtagatattg gaatggtcga tggattgaag caacaccaaa
       61 tgatgttgaa aaattaggtg gtataacaag agagaaagcg ctattcagtg aattaaacaa
      121 tatttttatt aatttatcta tacaacacgc tagtcttttg tcagaagcta cagaattact
      181 gaatagcgag tacttagtag ataatgattt gaaagcggac ttacaagcaa gtttagacgc
      241 tgtgattgat gtttataatc aaattaaaaa taatttagaa tctatgacac ccgaaactgc
      301 aacgattggt cggttggtag atacaaaaac tttatttctt gagtatagaa agaaattaca
      361 agatgtttat acagatgtag aagatgtcaa aatcgccatt tcagatagat ttaaattatt
      421 acagtcacaa tacactgatg aaaaatataa agaagcgttg gaaataatag caacaaaatt
      481 tggtttaacg gtgaatgaag atttgcagtt agtcggagaa cctaatgttg ttaaatcagc
      541 tattgaagca gctagagaat ccacaaaaga acaattacgt gactatgtaa aaacatcgga
      601 ctataaaaca gacaaagacg gtattgttga acgtttagat actgctgaag ctgagagaac
      661 gactttaaaa ggtgaaatca aagataaagt tacgttaaac gaatatcgaa acggattgga
      721 agaacaaaaa caatatactg atgaccagtt aagtgatttg tccaataatc ctgagattaa
      781 agcaagtatt gaacaagcaa atcaagaagc gcaagaagct ttaaaa
//
LOCUS       DAKPJH010000257          818 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.262, whole genome shotgun sequence.
ACCESSION   DAKPJH010000257 DAKPJH010000000
VERSION     DAKPJH010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.262"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            152..472
                     /locus_tag="OY092_002791"
     CDS             152..472
                     /locus_tag="OY092_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HCX1077649.1"
                     /translation="MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVP
                     KGTQQYVNITAYSERGEKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKE
                     VRQE"
     gene            469..>818
                     /locus_tag="OY092_002792"
     CDS             469..>818
                     /locus_tag="OY092_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1077650.1"
                     /translation="MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLL
                     NTIAGLEKTGKQYVYFNGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYK
                     KISKKEKEQLKIRY"
BASE COUNT          327 a           91 c          129 g          271 t
ORIGIN      
        1 tttttattgg aatattgacg aatgtaattt tacattctca gtatataatg atgatatttg
       61 taacgattat tgtcgttcaa atattattgc agatttgcag cctatactat catggccgac
      121 gttttaatgg agttatcaag gagttttaac tatgaaattt atcattgcaa tattattagg
      181 attaatatta tccattacta ttgcttttac aatcatacat catcctatac ttgatcgttt
      241 taatcctttc ttaaaaacgg agtatagtta tgccaaagtg ccaaaaggta cgcaacaata
      301 tgttaatatt acggcttata gtgaaagagg ggaaaagctt gattataaat taacatttaa
      361 tggattttca cctagtagaa cgtatgtcga aataaagcat aaagggcaat atgtcatatc
      421 gatcacatat gttgaaaaag aggatacacc aaaagaggta agacaagaat gatagaatta
      481 aaagatttaa ccatacaaaa aggtaataca catattttga agaaacttaa tttgaaattt
      541 caatgtggaa aatcatatgc acttattggt aaaagtggat gcggaaaatc tacattatta
      601 aatactattg ctggacttga aaaaacaggg aaacaatatg tctattttaa tggtcaatta
      661 gaacaattta aatctaattt ttacagagat aaattaggat atttatttca aaattatgga
      721 ttaatcgata atttgacagt aaatgaaaat ttagatattg gattagcata taaaaaaata
      781 agtaagaaag aaaaagaaca attaaagata cgttatat
//
LOCUS       DAKPJH010000258          751 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.263, whole genome shotgun sequence.
ACCESSION   DAKPJH010000258 DAKPJH010000000
VERSION     DAKPJH010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.263"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            17..670
                     /locus_tag="OY092_002793"
     CDS             17..670
                     /locus_tag="OY092_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HCX1077651.1"
                     /translation="MAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLS
                     SSANASQTDNGVNRIGSEDSTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTF
                     RLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYI
                     YADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ"
BASE COUNT          280 a          106 c          149 g          216 t
ORIGIN      
        1 aagtgctggc atatgtatgg caattgtttc aatattactt atagggatgg ctatcagtaa
       61 tgtttcgaaa gggcaatacg caaagaggtt tttctttttc gctactagtt gcttagtgtt
      121 aactttagtt gtagtttcaa gtctaagtag ctcagcaaat gcatcacaaa cagataacgg
      181 cgtaaataga attggttctg aagattcaac agtatatagt gcaacttcaa ctaaaaaatt
      241 acataaagaa cctgcgacat taattaaagc gattgatggt gatacggtta aattaatgta
      301 caaaggtcaa ccaatgacat tcagactatt attagttgat acacctgaaa caaagcatcc
      361 taaaaaaggt gtagagaaat atggccctga agcaagtgca tttacgaaaa aaatggtaga
      421 aaatgcaaag aaaattgaag tcgagtttga caaaggtcaa agaactgata aatatggacg
      481 tggcttagcg tatatttatg ctgatggaaa aatggtaaac gaagctttag ttcgtcaagg
      541 cttggctaaa gttgcttatg tttataaacc taacaataca catgaacaac ttttaagaaa
      601 aagtgaagca caagcgaaaa aagagaaatt aaatatttgg agcgaagaca acgctgattc
      661 aggtcaataa tgctcattgt aaaagtgtca ctgctgctag tggcactttt ataattttta
      721 gatcacgata tgatttatta tcaattcaga a
//
LOCUS       DAKPJH010000259          735 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.264, whole genome shotgun sequence.
ACCESSION   DAKPJH010000259 DAKPJH010000000
VERSION     DAKPJH010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.264"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>735
                     /locus_tag="OY092_002794"
     CDS             <1..>735
                     /locus_tag="OY092_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HCX1077652.1"
                     /translation="DFVISNLGEGYKATNFPDAKGWVGAGTKRGLPKAMTDFQITYKC
                     IVEQKGKGAGRTAQHIYDSDGKLLASIGYENKYHDRKIGHIVVTLYNQKGDPKKIYDY
                     QNKPIMYNLDRIVVYMRLRRVGNKFSIKTWKFDHIKDPDRRKPIDMDEKEWIDGGKFY
                     QRPASIIAIYSAKYNGYKWMEMNGLGSFNTEILPKPKGARDVIIQKGDLVKIDMQAKS
                     VVINEEPMLSEKSFGSNYFNVDSGYSE"
BASE COUNT          266 a           98 c          165 g          206 t
ORIGIN      
        1 gactttgtga tatccaatct tggcgaagga tataaagcaa ctaattttcc tgatgcaaaa
       61 ggttgggttg gtgctggcac aaaacgaggg ctccctaaag cgatgacaga ttttcaaatt
      121 acctataaat gtattgttga acaaaaaggt aaaggtgccg gaagaacagc acaacatatt
      181 tatgatagtg atggtaagtt acttgcttct attggttatg aaaataaata tcatgataga
      241 aaaataggac atattgttgt tacgttgtat aaccaaaaag gagaccccaa aaagatatac
      301 gactatcaga ataaaccgat aatgtataac ttggacagaa tcgttgttta tatgcggctc
      361 agaagagtag gtaataaatt ttctattaaa acttggaaat ttgatcacat taaagaccca
      421 gatagacgta aacctattga tatggatgag aaagagtgga tagatggcgg taagttttat
      481 cagcgtccag cttctatcat agctatctat agtgcgaagt ataacggtta taagtggatg
      541 gagatgaatg gattaggttc attcaatacg gagattctac cgaaaccgaa aggcgcaagg
      601 gatgtcatta tacaaaaagg tgatttagtg aaaatagata tgcaagcaaa aagtgttgtc
      661 atcaatgagg aaccaatgtt gagcgagaaa tcgtttggaa gtaattattt caatgttgat
      721 tctgggtaca gtgaa
//
LOCUS       DAKPJH010000260          722 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.265, whole genome shotgun sequence.
ACCESSION   DAKPJH010000260 DAKPJH010000000
VERSION     DAKPJH010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.265"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            44..>722
                     /locus_tag="OY092_002795"
     CDS             44..>722
                     /locus_tag="OY092_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000177667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCX1077653.1"
                     /translation="MTMEQLATDLNNKYPDLMKLTKGKISKWENEKEEPRLSTAKILA
                     EYFNVKINDLYSESNTTYKDDNDITSIYNKLTPPRQENVLNYANEQLEEQNKVTSIDG
                     YKESKLVSYIACGATGAGIGEELYDDILHEEVFFKEDETPSNADFCILVNGDSMEPML
                     KQGTYAFIKKEDSIKDGTIALVVLDGVSLIKRVDICEDYINLVSLNPKYDDIKVASFS
                     NIKVMGKV"
BASE COUNT          283 a           98 c          136 g          205 t
ORIGIN      
        1 gggtattggt gaaggtttaa agaagctaag aaaaaataaa aatatgacta tggaacaatt
       61 agcaactgat cttaataata aatatcccga cttaatgaaa ttaacgaaag gcaagatatc
      121 aaaatgggaa aatgaaaagg aagaacctcg attatcaact gccaaaattt tggctgagta
      181 cttcaatgtg aagattaatg atttgtatag tgaatcaaat actacataca aagacgataa
      241 cgacatcact tccatataca acaaactcac acctccccgc caagaaaacg tacttaacta
      301 tgcaaatgaa caattggaag aacagaataa agtcacttct atagatggat ataaagagtc
      361 taaactagta tcgtatattg catgtggtgc aactggtgct ggcataggag aagaattata
      421 tgatgacata ttgcatgaag aagtattttt taaagaagac gaaacgccat caaatgctga
      481 tttttgtatt ttagttaatg gtgattcaat ggaacctatg ttaaaacaag gaacatacgc
      541 ttttattaag aaagaagatt ctattaaaga tggtacaatt gcactcgttg tattagatgg
      601 agtaagtctt atcaagcgtg tagatatatg cgaagactat attaatttgg tatctctaaa
      661 tccgaagtat gatgatatca aagtcgcttc gtttagtaat attaaagtaa tgggcaaagt
      721 tg
//
LOCUS       DAKPJH010000261          721 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.266, whole genome shotgun sequence.
ACCESSION   DAKPJH010000261 DAKPJH010000000
VERSION     DAKPJH010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.266"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(2..247)
                     /locus_tag="OY092_002796"
     CDS             complement(2..247)
                     /locus_tag="OY092_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077654.1"
                     /translation="MSDMLEIFLIGFGVYLFYRIGIIFLKSKKTIHTNLYEMLLIATI
                     FVTSTFADKHQKTHILIAFLVMFFMSKLKQVQGSYEE"
     gene            complement(284..>721)
                     /locus_tag="OY092_002797"
     CDS             complement(284..>721)
                     /locus_tag="OY092_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP pyrophosphatase"
                     /protein_id="HCX1077655.1"
                     /translation="SAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLV
                     IETGKIDAGYHGNLGINIKNDAQVYLTTNEQCFDIQGEMENSFVNNAKKKPFTINDYY
                     EIYKGDKLAQLVIVPIWTPELKQVEEFESVSERGEKSFGSSGV"
BASE COUNT          208 a          157 c           98 g          258 t
ORIGIN      
        1 gtcattcctc atagctccct tgaacttgtt tgagcttact cataaaaaac attactaaaa
       61 atgctattaa gatatgcgtc ttttgatgtt tatcagcaaa tgtagatgtc acaaagatag
      121 tagcaatcaa caacatttca tataggtttg tgtgtatagt ctttttactc ttgagaaaaa
      181 taatacctat gcgataaaag agataaacgc caaaccctat taaaaatatt tctaacatgt
      241 cactcacttc cccaaaacct ccttgactcg atctaagatg tctttacact ccgctacttc
      301 cgaagctttt ttctccacgt tctgaaacac tctcgaattc ctccacttgc tttagttcag
      361 gtgtccatat aggcacaata accagttgtg ctagtttgtc gcctttatat atttcgtaat
      421 aatcatttat agtaaaaggt tttttcttag cattatttac aaaagaattt tccatttctc
      481 cttgtatatc aaaacactgt tcattagttg ttaaatatac ttgtgcatca ttcttgatat
      541 taatccctaa attaccatga tatcccgcgt ctatcttgcc tgtttcaatc actaaatgtg
      601 ttttactact tacaccacta cggctagtta atagcccgac atagccctct ggtatgctta
      661 cggctacatc tgttttaatc actgcctttt cttgtggctc gagtacgaca gtttcagctg
      721 a
//
LOCUS       DAKPJH010000262          713 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.267, whole genome shotgun sequence.
ACCESSION   DAKPJH010000262 DAKPJH010000000
VERSION     DAKPJH010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.267"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..228
                     /locus_tag="OY092_002798"
     CDS             <1..228
                     /locus_tag="OY092_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009560502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail adapter protein"
                     /protein_id="HCX1077656.1"
                     /translation="SEDEYLKQLLKMSYERIKNQCGVFELENLIGQELILIRARYAYQ
                     DLLEHFNDNYRPEIIDFSLSLMEVSEDEESV"
     gene            212..574
                     /locus_tag="OY092_002799"
     CDS             212..574
                     /locus_tag="OY092_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HCX1077657.1"
                     /translation="MKKVFKKPRITTKRLNTRVHFYKYTENNGPEAGEKEEKLLYSCW
                     ASIDGVWLRELEQAISNGTQNDIKLYIRDPQGDYLPSEEHYLEIESRYFKNRLNIKQV
                     SPDLDNKDFIMIRGGYSS"
     gene            571..>713
                     /locus_tag="OY092_002800"
     CDS             571..>713
                     /locus_tag="OY092_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000114224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077658.1"
                     /translation="MSVKVTGDKALERELEKHFGIKEMVKVQDKALIAGAKVIVEEIK
                     KQL"
BASE COUNT          279 a           82 c          146 g          206 t
ORIGIN      
        1 tcagaggatg agtacttaaa gcagttgtta aaaatgtcgt acgagcgtat aaaaaatcag
       61 tgcggagttt ttgaattaga gaatttaata ggtcaagaat tgatacttat acgcgctaga
      121 tatgcttatc aagatttatt agaacacttc aacgacaatt acagacctga aataatagat
      181 ttttcgttat ctctaatgga ggtatcagaa gatgaagaaa gtgtttaaga aacctagaat
      241 tacaactaaa cgtttaaata cgcgtgttca tttttataag tatactgaaa ataatggtcc
      301 agaagctgga gaaaaagaag aaaaattatt atatagctgt tgggcgagta ttgatggtgt
      361 ctggttacgt gaattagaac aagctatctc aaacggaacg caaaatgaca ttaaattgta
      421 tattcgtgat ccgcaaggtg attatttacc cagtgaagaa cattatcttg aaattgaatc
      481 aagatatttc aaaaatcgtt tgaatataaa gcaagtatca ccagatttgg ataataaaga
      541 ctttattatg attcgcggag gatatagttc atgagtgtga aagtgacagg tgataaagca
      601 ttagaaagag aattagaaaa acattttggc ataaaagaga tggtaaaagt tcaagataag
      661 gcgttaatag ctggtgctaa ggtaattgtt gaagaaataa aaaaacaact caa
//
LOCUS       DAKPJH010000263          702 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.268, whole genome shotgun sequence.
ACCESSION   DAKPJH010000263 DAKPJH010000000
VERSION     DAKPJH010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.268"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..316
                     /locus_tag="OY092_002801"
     CDS             <1..316
                     /locus_tag="OY092_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HCX1077659.1"
                     /translation="REEQVELLMRMKPLIESICHKDPLLNDVASLLKEIGLNVNSNDY
                     TAMRLHNLYETRLKLDELPLPTTHKALNSRASIIQILNELEEYLQIKSQFGSLKMHSE
                     VA"
     gene            complement(443..622)
                     /gene="prli42"
                     /locus_tag="OY092_002802"
     CDS             complement(443..622)
                     /gene="prli42"
                     /locus_tag="OY092_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HCX1077660.1"
                     /translation="MLVISSQVKSFISYVVIINTKVIHLEAHKMQNKVLRIIIIVMLV
                     SVVLALLLTSIIPIL"
BASE COUNT          267 a           96 c          116 g          223 t
ORIGIN      
        1 gcgagaagag caagtggaat tgttaatgag aatgaaaccg ctcatcgaaa gtatctgtca
       61 taaagatcca cttttaaatg atgttgcgtc actgctgaaa gaaattggtc taaatgtgaa
      121 tagtaatgac tatacagcaa tgcgtttaca caatttgtat gagacgcgtt tgaaattgga
      181 tgaactgcca ttgccaacaa cgcacaaagc gcttaactcg agagcaagta ttattcaaat
      241 attaaatgaa ttagaagaat atttacaaat caaatcgcaa tttggttcat tgaaaatgca
      301 tagtgaagta gcttaaaaaa taatccatcc gtatgaccca tgtatgaaag taatcgttgc
      361 aatacgataa cttattaata catgcgttta taacggatgg atttttaatt gtatgatttt
      421 gtataggtag ttgagatata gtttataaaa ttggaatgat actcgttaat aacaatgcta
      481 atacaactga tacaagcata acgataatga taattcttaa aactttattt tgcattttgt
      541 gtgcctccaa atgaataacc tttgtattaa taattacgac ataagatata aaacttttaa
      601 cttgagacga tataactagc aatcatcata aaggaatata ataaaaaaca tgagtaagtt
      661 tgcttatgtc attttcctca ttatacgata tcattgaaaa at
//
LOCUS       DAKPJH010000264          701 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.269, whole genome shotgun sequence.
ACCESSION   DAKPJH010000264 DAKPJH010000000
VERSION     DAKPJH010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.269"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            49..405
                     /locus_tag="OY092_002803"
     CDS             49..405
                     /locus_tag="OY092_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCX1077661.1"
                     /translation="MKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIA
                     VLMSIGEVVGGLALIIGFLTPYVNVFYICVMLGSIFTLKLTRGYVSGYEFEIIHIVMN
                     LACISSYSWKKWLQFY"
     gene            complement(494..631)
                     /locus_tag="OY092_002804"
     CDS             complement(494..631)
                     /locus_tag="OY092_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001788572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(glycerol-phosphate)
                     alpha-glucosyltransferase"
                     /protein_id="HCX1077662.1"
                     /translation="MADKILKLVNNDVLAEEFGSKARENIIEKYSTESILEKWLNLFN
                     S"
BASE COUNT          208 a           99 c          108 g          286 t
ORIGIN      
        1 taatttggac tatgttttaa gaaaaaaatg tatgttggag gtgacatgat gaaattaggt
       61 atgcttttaa ttagatggat gttagcaaca tcattcttag tgcatggtac tttgaaattt
      121 gttgatttag atggaacaat tcacttctta ggctctttag gtttaccacc taccatcgca
      181 gtattgatgt ccattggtga agttgttgga ggtttagcac ttattatcgg ctttttaacg
      241 ccttatgtta atgtttttta tatttgtgtt atgttaggct caatcttcac acttaaactt
      301 acaagaggat atgtaagtgg ttatgaattt gaaatcatac atatcgtaat gaacttagct
      361 tgtattagta gttacagctg gaagaaatgg ctacaatttt attaactatt atttgagagg
      421 actatcctct ctttttttgt atatataatg cgtaaaaatc ctaggtactc atgaatacct
      481 aggatttttt catttagcta ttgaaaagat ttaaccattt ttctaatatt gattccgttg
      541 aatatttttc tataatgttt tctctcgctt tcgaaccaaa ctcctctgct aaaacatcat
      601 tattaacaag ctttaatatt ttatcagcca tgtcgtttat attatggttt tctattaaat
      661 aaccattttt attatcttct ataaaatcac cttttaatca a
//
LOCUS       DAKPJH010000265          690 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.270, whole genome shotgun sequence.
ACCESSION   DAKPJH010000265 DAKPJH010000000
VERSION     DAKPJH010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.270"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(2..307)
                     /locus_tag="OY092_002805"
     CDS             complement(2..307)
                     /locus_tag="OY092_002805"
                     /inference="COORDINATES: protein motif:HMM:NF014427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HCX1077663.1"
                     /translation="MYWKRDRGYGNFVTKPASSETAVKSVSIPDSIKTLKVGDTYDLN
                     VVVEPSNQSKLLKYTTDQTNIVSINSDGQVTAEAQGIATVKATAGNMSDTITINVEA"
     gene            complement(268..>690)
                     /locus_tag="OY092_002806"
     CDS             complement(268..>690)
                     /locus_tag="OY092_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCX1077664.1"
                     /translation="SLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQE
                     RRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFD
                     SANMTNHDGNGEKGEEAFLKKILGEEYTGNVTEDTETL"
BASE COUNT          180 a          147 c          100 g          263 t
ORIGIN      
        1 cttatgcttc tacatttatt gttatagtgt cactcatatt accagctgtt gctttaaccg
       61 tagcaatgcc ttgtgcttcc gcagtaactt gaccatcact attgattgat acaatattcg
      121 tttgatctgt tgtgtatttc aataacttac tttgattaga tggctctact acaacattta
      181 aatcgtatgt gtcgccaact ttaagtgttt taatgctatc tggtatacta accgacttta
      241 ccgcagtttc cgatgaagcc ggtttcgtta caaagtttcc gtatcctctg tcacgtttcc
      301 agtatattct tcgcctaaaa ttttctttaa gaaagcctct tcgccttttt caccattacc
      361 atcatgattt gtcatgttag ctgagtcaaa gatatattta cgtacagact ttttattatc
      421 aattaaaggg aaaagtgcct caccttctac ttcttcactt gagaagtccc agtctttttc
      481 agctgtttca ccatcaattt taggatttgt aaacataact ttaggtaata aaactgttct
      541 aaatgtaccg tctctacgct cttgtctgaa ccatacagct acgtaattgt tttgcttacc
      601 ttgtttctct tcgtaaacgc catcttcatc ataatcttca ttaaaaacaa ttttgcgaat
      661 ctctttaggg aacgcatgca tttgtaatga
//
LOCUS       DAKPJH010000266          687 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.271, whole genome shotgun sequence.
ACCESSION   DAKPJH010000266 DAKPJH010000000
VERSION     DAKPJH010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.271"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            174..557
                     /locus_tag="OY092_002807"
     CDS             174..557
                     /locus_tag="OY092_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077665.1"
                     /translation="MSNQNLFDELEKKGYKLEDIFTKEEIKKFKAEDQLRAGKTQYVE
                     TGKDTATLYLSSAYTKTIAALGAGTISVISALTGGLVGAGVGSFLGSIAASNIDTSKR
                     IYLKLKTKKNAAGEYVLIGEKWGYQ"
     gene            568..>687
                     /locus_tag="OY092_002808"
     CDS             568..>687
                     /locus_tag="OY092_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077666.1"
                     /translation="MDRLKYSLKVGILALLLFCTLNYLVPMQSNAFSIIIYSAI"
BASE COUNT          262 a           81 c          122 g          222 t
ORIGIN      
        1 tatacgaaag ctaaatacaa aaatcatcta aaagaaacta atgaaaaacg aattaaaaat
       61 cattattatt agctgctggt gtattatttg ttagtccaat ttcattatct tataattcag
      121 atgtagctca tgctgaagat aagttagacc attctcaagc aaaggttata tatttgagta
      181 accaaaattt atttgatgaa cttgagaaaa aaggttataa actggaagat atatttacaa
      241 aagaagaaat aaaaaaattt aaagctgaag accaattaag agcgggtaaa actcaatatg
      301 tagaaacagg taaagatact gcaacgttat atctttcttc tgcatataca aaaacaatag
      361 ctgctttagg tgcggggact attagcgtta tttctgcact aacaggaggt ttagttggcg
      421 caggtgttgg tagtttcctt ggatctatag ctgcatcgaa tattgatact agtaagagaa
      481 tatatttaaa attaaaaact aaaaagaatg cagccgggga atacgttctg ataggagaaa
      541 aatggggata tcagtaaggg tgattttatg gatagattaa aatattcact taaagttggt
      601 attttagcat tattattatt ttgtacttta aattatttag ttccaatgca aagcaatgct
      661 ttttcaataa ttatatattc ggcaatt
//
LOCUS       DAKPJH010000267          684 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.272, whole genome shotgun sequence.
ACCESSION   DAKPJH010000267 DAKPJH010000000
VERSION     DAKPJH010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.272"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..294
                     /locus_tag="OY092_002809"
     CDS             <1..294
                     /locus_tag="OY092_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCX1077667.1"
                     /translation="IEQFGLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPT
                     GALDPKTGQMIIQSLFDLVDENKVLILATHDMAIANQCDEIIDLEQYRKVASM"
     gene            complement(382..672)
                     /locus_tag="OY092_002810"
     CDS             complement(382..672)
                     /locus_tag="OY092_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077668.1"
                     /translation="MFCAYHFKMKIGGVILTRTYNIIGILSCLISFIIMALPMIWYTA
                     SALWFFPGAIMILLLSLVIVFCYIKTKNQLHLLLLVLNIIILLFFSLPLLLS"
BASE COUNT          279 a           91 c          115 g          199 t
ORIGIN      
        1 atagaacagt ttggtctgtc aaacagttta aaaagaaaag ttcatacgct aagtggaggt
       61 gaacaacaac gtgtcgcttt aattagaatg atgttaaaag atccgattgt tatgttagct
      121 gatgaaccaa cgggtgcgtt agatcctaaa acaggacaga tgattattca atcattattt
      181 gatttggtcg atgaaaataa agtgctgatt ttagcaacac atgatatggc tattgcaaat
      241 caatgtgacg aaataataga tttagaacag tatagaaaag tagcatctat gtgatatcca
      301 aaagataaaa ttaaaagcca atcaatggga aatgttgact tcaacactcc gtttgattgg
      361 cttttataat gtgttactaa gttatgaaag taacaacggc aaactgaaaa aaagcaatat
      421 aataatattt aatacgagta gtaataaatg taattgattt ttcgttttaa tatagcaaaa
      481 aacaatgact aaagataaca acaatatcat gattgcacct gggaagaacc ataatgctga
      541 agctgtgtac caaatcattg gtaacgccat aataataaaa gatataagac aagaaaggat
      601 accaataata ttataagttc tagtcaaaat tacacctcca attttcattt taaaatgata
      661 tgcgcaaaac aatcatttta aata
//
LOCUS       DAKPJH010000268          682 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.273, whole genome shotgun sequence.
ACCESSION   DAKPJH010000268 DAKPJH010000000
VERSION     DAKPJH010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.273"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(3..308)
                     /locus_tag="OY092_002811"
     CDS             complement(3..308)
                     /locus_tag="OY092_002811"
                     /inference="COORDINATES: protein motif:HMM:NF014427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HCX1077669.1"
                     /translation="MYWKRDRGYGNFVTKPASSETAVKSVSIPDSIKTLKVGNTYDLN
                     VVVEPSNQRKLVKYTTDQTNVVSINSDGQVTAEAQGIATVKATVGNMSDTITINVEA"
     gene            complement(269..>682)
                     /locus_tag="OY092_002812"
     CDS             complement(269..>682)
                     /locus_tag="OY092_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCX1077670.1"
                     /translation="MHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRD
                     GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFDSAN
                     MTNHGGDGEKGEEAFLKKILGEEYTGNVTEDTETL"
BASE COUNT          173 a          148 c          101 g          260 t
ORIGIN      
        1 tcttatgctt ctacatttat tgttatagtg tcactcatat taccaacagt tgctttaacc
       61 gtggcaatgc cttgcgcttc tgcagtgact tgaccatcac tatttattga tacaacatta
      121 gtttgatctg ttgtgtattt tactagcttc ctttgattag atggttctac tacaacattt
      181 aaatcgtatg tgttgccaac tttaagtgtt ttaatgctat ctggtatact aaccgacttt
      241 accgcagttt ccgatgaagc cggtttcgtt acaaagtttc cgtatcctct gtcacgtttc
      301 cagtatattc ttcgcctaaa attttcttta agaaagcctc ttcgcctttt tcaccgtcgc
      361 caccatgatt tgtcatgtta gctgagtcaa agatatattt acgtacagac tttttattat
      421 caattaaagg gaaaagtgcc tcaccttcta cttcttcact tgagaagtcc cagtctttct
      481 cagctgtttc accatcaatt ttaggatttg taaacataac tttaggtaat aaaactgttc
      541 taaatgtacc gtctctacgc tcttgtctga accatacagc tacgtaattg ttttgtttac
      601 cttgtttctc ttcgtaaacg ccatcttcat cataatcttc attaaaaaca attttgcgaa
      661 tctctttagg gaacgcatgc at
//
LOCUS       DAKPJH010000269          663 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.274, whole genome shotgun sequence.
ACCESSION   DAKPJH010000269 DAKPJH010000000
VERSION     DAKPJH010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.274"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>663
                     /locus_tag="OY092_002813"
     rRNA            <1..>663
                     /locus_tag="OY092_002813"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          162 a          145 c          211 g          145 t
ORIGIN      
        1 cgtggtggga gacagtgtca ggcgggcagt ttgactgggg cggtcgcctc ctaaaaggta
       61 acggaggcgc tcaaaggttc cctcagaatg gttggaaatc attcatagag tgtaaaggca
      121 taagggagct tgactgcgag acctacaagt cgagcagggt cgaaagacgg acttagtgat
      181 ccggtggttc cgcatggaag ggccatcgct caacggataa aagctacccc ggggataaca
      241 ggcttatctc ccccaagagt tcacatcgac ggggaggttt ggcacctcga tgtcggctca
      301 tcgcatcctg gggctgtagt cggtcccaag ggttgggctg ttcgcccatt aaagcggtac
      361 gcgagctggg ttcagaacgt cgtgagacag ttcggtccct atccgtcgtg ggcgtaggaa
      421 atttgagagg agctgtcctt agtacgagag gaccgggatg gacatacctc tggtgtacca
      481 gttgtcgtgc caacggcata gctgggtagc tatgtgtgga cgggataagt gctgaaagca
      541 tctaagcatg aagcccccct caagatgaga tttcccaact tcggttataa gatccctcaa
      601 agatgatgag gttaataggt tcgaggtgga agcatggtga catgtggagc tgacgaatac
      661 taa
//
LOCUS       DAKPJH010000270          655 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.275, whole genome shotgun sequence.
ACCESSION   DAKPJH010000270 DAKPJH010000000
VERSION     DAKPJH010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.275"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(16..507)
                     /locus_tag="OY092_002814"
     CDS             complement(16..507)
                     /locus_tag="OY092_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001031902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077671.1"
                     /translation="MNKFKLSWLNIGTALFILTYINIAIFITYIFITYIFQPKILVGI
                     KDMLNAITNNHISKIFSNINSDMIYNLYLFYFYLIGVCACLLYLSILLCVFKIIIPSR
                     IGEILGWLISLLTQQFNIFLIAKMTNDKIATDTCIICISGFLFFTYLYLNSHDFSNKH
                     RDA"
BASE COUNT          272 a           64 c           90 g          229 t
ORIGIN      
        1 tggaaaagga atcaattatg cgtcacgatg tttatttgaa aaatcgtgac tgtttaaata
       61 aagataagta aagaataaga atcctgaaat acaaataatg caagtgtcgg tggctatttt
      121 atcattagtc atttttgcga ttaaaaaaat attaaattgt tgtgttagta aactgattaa
      181 ccatccaagt atttcaccta ttcgagatgg aattattatc ttgaagacac aaagcagtat
      241 agataaataa agtaaacaag cacaaacacc aattagataa aaatagaaca gatataaatt
      301 ataaatcata tcagaattaa tattactaaa aattttagag atatggttat ttgtaattgc
      361 atttaacata tctttgatgc caactagtat tttaggttga aatatataag tgataaatat
      421 ataagtgata aatatagcta tattaatata cgttaatata aataaagctg taccaatatt
      481 taaccaactt aatttaaatt tgttcataag gaggtcatcc tttcaaatgt ttgttttgaa
      541 ttgtattgct tcgttattta ttttgttttt atcgattaaa cggattaagt atttactaga
      601 taaagaagaa aatagacata aagttgaaat taataaaata aaaacaaata tattt
//
LOCUS       DAKPJH010000271          630 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.276, whole genome shotgun sequence.
ACCESSION   DAKPJH010000271 DAKPJH010000000
VERSION     DAKPJH010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.276"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(259..450)
                     /locus_tag="OY092_002815"
     CDS             complement(259..450)
                     /locus_tag="OY092_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077672.1"
                     /translation="MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPY
                     IDAERLYHFAMERKSLVTN"
BASE COUNT          215 a          109 c           93 g          213 t
ORIGIN      
        1 ttgtacatgt ttaaacaatc aaaagtgtac attattaaat tatcatttcc agtaggtaat
       61 cgttttaaaa ataatataag catgactaaa gccacatcca atataggacg tggcttttag
      121 tatcgttcca gatttgtggg gagttagggt ttacttaatt aaaggggtct gccctcaatt
      181 gctcaccaac gagggcaagt tacatcaatc acacttcaat tgccgccgac taggggtagt
      241 aatcattggc aataagaact agttagtgac taacgattta cgttccatag caaagtgata
      301 caaacgctca gcatcaatgt aaggcataga atcaatagtt aggtaaccat ctttgatgtc
      361 accaattaat ccttgattta caccagtgtt cacgtaaata tcatagctac ttacgtctga
      421 gaaaataagc gcttcaatct cttttctcat aatcatcact ccaatgttta tatattattt
      481 atataaactc tctcgtctct ctctatttat taacttctta caagtctaat attacatgaa
      541 tttccaaata aataaaggga tttgtgatgt atttcacaaa tttatcacta ttttggaaaa
      601 ttaagaaata tttaattata taaaagttta
//
LOCUS       DAKPJH010000272          604 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.277, whole genome shotgun sequence.
ACCESSION   DAKPJH010000272 DAKPJH010000000
VERSION     DAKPJH010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.277"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..192)
                     /locus_tag="OY092_002816"
     CDS             complement(<1..192)
                     /locus_tag="OY092_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001816916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077673.1"
                     /translation="MGERIKGLSIGLDLDSANLNRSLTEIKRNFRTLNSDLKLTGNNF
                     KYTEKSTDSYKQRIKELDGT"
     gene            complement(249..386)
                     /locus_tag="OY092_002817"
     CDS             complement(249..386)
                     /locus_tag="OY092_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077674.1"
                     /translation="MMDLIENGKDANEVLKMPFHYVLSIYQNKNNDISEEKAEALIDA
                     F"
     gene            complement(437..>604)
                     /locus_tag="OY092_002818"
     CDS             complement(437..>604)
                     /locus_tag="OY092_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077675.1"
                     /translation="LMDMVVKIYDNQFTVKDLKERMHAPDGMNALREQVIFITQGQQT
                     EETRNFIQNMK"
BASE COUNT          177 a          105 c           78 g          244 t
ORIGIN      
        1 tgttccatct aactctttga ttcgttgttt ataactatca gttgatttct cagtatattt
       61 aaagttgttt ccagtcaact ttaagtctga atttaaggtt ctaaagtttc gtttaatttc
      121 tgtaagtgat ctatttaaat ttgctgaatc caaatccaaa cctatagata aaccttttat
      181 tctttctccc attttttacc tcctttctaa aaaagttcaa aaaaataacc ctaaccaaac
      241 ggttaaggtt aaaacgcatc aattaaagcc tctgcttttt cttcagaaat gtcattgttt
      301 ttattttgat atatggaaag tacataatga aatggcattt ttaagacttc gttagcgtct
      361 ttaccatttt caattaagtc catcatgaga gtatccatat ttttcaacat tgctttatat
      421 gttaaatctt caggctttat ttcatgttct ggataaaatt tctagtttcc tcagtttgct
      481 gaccttgagt aatgaaaatt acttgttcac gaagtgcatt cattccatca ggtgcatgca
      541 tacgttcttt taggtcttta actgtgaatt ggttatcgta aatttttaca accatatcca
      601 tcaa
//
LOCUS       DAKPJH010000273          600 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.278, whole genome shotgun sequence.
ACCESSION   DAKPJH010000273 DAKPJH010000000
VERSION     DAKPJH010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.278"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            142..498
                     /gene="sarT"
                     /locus_tag="OY092_002819"
     CDS             142..498
                     /gene="sarT"
                     /locus_tag="OY092_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarT"
                     /protein_id="HCX1077676.1"
                     /translation="MNDLKSKSNIKLMKRVLTTYELRKYLKKYFCLTLDNYLVLAYLD
                     VFKNDEGKYFMRDIISYIGIDQSRIVKSVKELSKKGYLNKCRDPHDSRNVIIVVSVKQ
                     HNYIKNLLSEININET"
BASE COUNT          242 a           49 c           97 g          212 t
ORIGIN      
        1 caattgaaca aaatcaaaat atagtgttat gattcatttg tgtttatagc tagcaccaca
       61 aactaaatat atttggagtt attactagtt aaagacaaat attatttgac gtgacaatta
      121 aaagtaaggg atgaagactt gatgaatgat ttgaaaagca agagcaatat taaattaatg
      181 aaaagagtat taactacata tgagctgcgt aaatatttaa aaaaatattt ttgtcttaca
      241 ttagataatt atttagtatt agcatattta gatgtattta aaaatgatga aggtaaatat
      301 tttatgagag acattataag ttatatcggt atagaccaat ctagaattgt taaaagcgta
      361 aaagaattat caaaaaaggg ttacttgaat aaatgtagag acccacatga tagtagaaat
      421 gtaatcattg ttgtttctgt aaaacaacac aattatatta aaaatctttt gagtgaaata
      481 aatattaatg aaacataaag tatgtttcga gattttaata tcttggtgca gttaaatgta
      541 tttttaaatg cgttaaggta ttttttattt tagaaattca atgctattga gttgatgggt
//
LOCUS       DAKPJH010000274          576 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.279, whole genome shotgun sequence.
ACCESSION   DAKPJH010000274 DAKPJH010000000
VERSION     DAKPJH010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.279"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(287..576)
                     /locus_tag="OY092_002820"
                     /pseudo
     CDS             complement(287..576)
                     /locus_tag="OY092_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          196 a           90 c           56 g          234 t
ORIGIN      
        1 attaaattgc aacaattcta catatatttc ttcaaaaaag atacgcattg aatttttatt
       61 acatataact ctcatgaaaa ttgattaaac taaattaatt agttagcctt aaatttaaca
      121 aattaaatca aaccgaatga ggctaaattg gttatttttc aagatatgat ttgtataaat
      181 caaaacattt cttacaaatc aaatgtgtat aaaatgtgat atacattctc aaccttaaaa
      241 aagttctaaa aaaaagatga gcatctactg tctcatcttt cagttctttt ttacgggtct
      301 gttttctaat ttgagcacaa tcttcgattt ctttatctaa atgactacca attaaatcta
      361 tttcttctat tgttaaatcg ctatctccat cttcttttat cactggtatt attttttctt
      421 caactaagtc acgatataat gcttttgaat tttcgttcaa tttcgattcg tgattttgaa
      481 tacttttctt ccacacaaat gtatatctat tggcattagc ttctactttt gtaccatcaa
      541 taaaaattga attattatca ataagatttt gcttta
//
LOCUS       DAKPJH010000275          574 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.280, whole genome shotgun sequence.
ACCESSION   DAKPJH010000275 DAKPJH010000000
VERSION     DAKPJH010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.280"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            8..262
                     /locus_tag="OY092_002821"
     CDS             8..262
                     /locus_tag="OY092_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HCX1077677.1"
                     /translation="MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLT
                     DGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEPRRKY"
     gene            274..>574
                     /locus_tag="OY092_002822"
     CDS             274..>574
                     /locus_tag="OY092_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HCX1077678.1"
                     /translation="MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIR
                     MWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNT"
BASE COUNT          214 a           69 c          119 g          172 t
ORIGIN      
        1 taagaatatg attaattgga aaattagaat gaaacaaaaa tcattttggg tagcgatatt
       61 gtcagctatc tttttatttg ctcaaaacat cgcaaaagct attgggtatg atatccaagt
      121 ttatacagag caattaacag acggtttaaa cgctatatta ggatttttag tattaactgg
      181 tgtgattcaa gacccgacta ctaaaggtat aggtgatagc caccaagctt tagaatatga
      241 agaaccaaga agaaaatact aggaggtaaa ataatgaaaa catacagtga agcaagagca
      301 aggttacgtt ggtatcaagg tagatatatt gattttgacg gttggtatgg ttaccaatgt
      361 gcagatttag cagttgatta catttattgg ttgttagaaa ttagaatgtg gggaaatgca
      421 aaagatgcaa tcaataacga ttttaaaaac atggcaacag tatatgaaaa cacaccatcg
      481 tttgttccac aaataggtga tgtggctgta tttaccaaag gaatatataa acaatacggt
      541 catattggtt tagtgtttaa tggtggtaat acaa
//
LOCUS       DAKPJH010000276          567 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.281, whole genome shotgun sequence.
ACCESSION   DAKPJH010000276 DAKPJH010000000
VERSION     DAKPJH010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.281"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>567)
                     /locus_tag="OY092_002823"
     CDS             complement(<1..>567)
                     /locus_tag="OY092_002823"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077679.1"
                     /translation="KAIETPKEEKAIETPKNSNDLKFLKDAKFSSDSENLDIRLRPEY
                     NVGNALVVRVDKEINPEKFVDYPEGYTVQSYVSKGSDYPSVEKIVKNKITGMYKITYT
                     LMDKAGNPVNGSDGQVVIRSLNIYFYDPTPVLESIDKVNKKIKDGNYSNGDEVKKELD
                     KIRVDIERPKEIPNIKEFLSKVDMEEKK"
BASE COUNT          155 a          104 c           57 g          251 t
ORIGIN      
        1 attttttttc ttccatatca accttactta aaaattcttt gatatttggt atttctttag
       61 gtctttcaat gtcaactctt attttatcta gctctttctt aacttcatct ccattactgt
      121 agttcccatc ttttattttc ttatttactt tatcaatact ttctaatact ggtgtaggat
      181 cataaaaata tatattaagg ctacgaatga caacctgccc atcagaacca ttaacaggat
      241 ttccagcttt atccataaga gtatacgtta ttttatacat acctgttatt ttatttttaa
      301 ctatcttttc aacacttgga taatctgatc cttttgacac ataactttgt actgtgtatc
      361 cttctggata atccacaaat ttttcaggat ttatttcttt atctactctt acgactaatg
      421 cattcccaac attatattca ggtctaagac gtatatctaa attttctgaa tctgaagaaa
      481 attttgcatc ctttaaaaac ttcaaatcat tagaattttt aggtgtttct attgcttttt
      541 cttctttagg tgtttctatt gcttttt
//
LOCUS       DAKPJH010000277          557 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.282, whole genome shotgun sequence.
ACCESSION   DAKPJH010000277 DAKPJH010000000
VERSION     DAKPJH010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.282"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>557)
                     /locus_tag="OY092_002824"
     CDS             complement(<1..>557)
                     /locus_tag="OY092_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3883 domain-containing protein"
                     /protein_id="HCX1077680.1"
                     /translation="KFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEEIRTAQKDK
                     TLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNK
                     IDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFF
                     MSLNEMFAMKEYKQKYLILRIFNVS"
BASE COUNT          152 a           90 c           66 g          249 t
ORIGIN      
        1 ggaaacatta aatattctta atattaaata tttctgctta tattctttca tagcaaacat
       61 ttcatttagc gacataaaaa atggttcctc aatactagaa gatgtagatg ttttaatttc
      121 aataaatttt tctacagctt tatctgtatt tgttggatca aaagctacta aatcatagcc
      181 atgaccgtgt tgagagcctg gattatcatt taaaatattc ctaaactgtt ctttcttatc
      241 ttcgtctatt ttattatcaa ttagctcatt aaagtaattt agcgctaatt tttctccaac
      301 tttaccggtt aatttattct ctttatttga tttttcaatt tctgaatcat ttttagtagt
      361 ctttgataca ccttttttat attttggaat tattccttta ggtgcttcca cttccttgag
      421 tgtcttatct ttttgtgctg ttctaatttc ttcaatttcg ctgtcttcct gtatttcgtc
      481 tatgctattg accaagctat cataggatgt ttttgtaact tttgaagcta attcattaaa
      541 tagttctaaa aatttct
//
LOCUS       DAKPJH010000278          554 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.283, whole genome shotgun sequence.
ACCESSION   DAKPJH010000278 DAKPJH010000000
VERSION     DAKPJH010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.283"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            44..343
                     /locus_tag="OY092_002825"
     CDS             44..343
                     /locus_tag="OY092_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComGE"
                     /protein_id="HCX1077681.1"
                     /translation="MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQ
                     TIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQQICAISKNTTSYQKTCIQY"
     gene            261..>554
                     /locus_tag="OY092_002826"
     CDS             261..>554
                     /locus_tag="OY092_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCX1077682.1"
                     /translation="MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVI
                     SITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDILEDFRGVDRNDIEIRQQR"
BASE COUNT          215 a           64 c           96 g          179 t
ORIGIN      
        1 atttatagaa taatattcca tattgaaaaa ggaagaattc gttatgaaaa gctataagtg
       61 taaaggatca ttcttaatag atagtatggc tggatttttg ctaattggat tgattacatt
      121 actattgata ccaatgatga atcaaatgca agcgagtata aaccataaac tacaaacaat
      181 tgatgcttct aaagtaattt tgacgactgt atctaaaatt aataaagaag aacttaagaa
      241 gggggtaact atagggaaat atgatattaa gcaaagtgac caacaaattt gtgctatttc
      301 aaaaaatacc acttcttatc aaaagacatg tatacagtat taatgtcaaa gctttttcgc
      361 ttattgaaat gttagtagcg atgatggtta taagtataac tttactaatt gttccagact
      421 taattagact tagcaaaact tttctaattg aaagtaggga attaacaact gtagatttcg
      481 aatttttctc aagagatatt ctagaggatt ttagaggtgt agatagaaac gatattgaaa
      541 ttaggcaaca gcgt
//
LOCUS       DAKPJH010000279          549 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.284, whole genome shotgun sequence.
ACCESSION   DAKPJH010000279 DAKPJH010000000
VERSION     DAKPJH010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.284"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT          201 a           77 c           44 g          227 t
ORIGIN      
        1 aatcatttaa acattacaaa aatagatgta gtcagtttaa ttaaactatc taattgaaaa
       61 cgcactactt tttagcattt tcaaaataat tttaaatgac cacatctaca acgtattact
      121 attatctttt gttagcctta cattcatttt caatttaaaa ataaacactt atttaaatca
      181 cattctactt ttgagatgag ctcaaactaa cattaaattg tttatattat ctatacttat
      241 tcctattaat atttcgattt taaaattaat acgtagctat actttactct tctaataaaa
      301 gtgtaattag aaaggcaagt atacctgttt aaagtttatc ttctaagatt tgtttacttt
      361 agaactatag cagttaatca tttcaatgat taataatatc tttacaatta aggtaatata
      421 tttaaattac cctatctaaa tttctaattt atgacaatcg ctccaattta aggttgatat
      481 tcattgttga ttattccaaa actttataca aatttcttta ttaatttaaa tgtttatctt
      541 ctgaacata
//
LOCUS       DAKPJH010000280          534 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.285, whole genome shotgun sequence.
ACCESSION   DAKPJH010000280 DAKPJH010000000
VERSION     DAKPJH010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.285"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..510
                     /locus_tag="OY092_002827"
     CDS             <1..510
                     /locus_tag="OY092_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001573791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HCX1077683.1"
                     /translation="KGVSVTDGAYPEKEEQGTLTFANPRATVNELTQVFKYHSTNEKG
                     KSVAVKGNVTMVVNPSDAFEVQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTY
                     VKGLYDGYLAGGINVQKFKETLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKP
                     ALEDTEETL"
BASE COUNT          187 a           73 c          114 g          160 t
ORIGIN      
        1 aaaggtgtat cggtaactga tggtgcttat ccagagaaag aagaacaagg tacgcttaca
       61 tttgctaatc cgcgcgctac ggttaatgaa ttgacgcaag tgtttaaata ccactcaact
      121 aacgagaaag gtaaatcagt agcggttaaa ggtaatgtaa caatggttgt taatccgtcc
      181 gatgcttttg aggttcaagc acagtataca catttaaatg caaatggcgt atatgttact
      241 gctttaccat ttaatttgaa tgttattgag tctacagttc aagaagcagg taaggtttta
      301 acgtacgtta aaggtctata tgatggttat ttagctggtg gtattaatgt tcagaaattt
      361 aaagaaacac ttgcgttaga tgatatggat ttatacactg caaaacaatt tgcttacggc
      421 aaagcgaaag ataataaagt tgctgctgtt tggaaattag atttaaaagg acataaacca
      481 gctttagaag ataccgaaga aacactataa aattttatga ggtgataaaa tggt
//
LOCUS       DAKPJH010000281          531 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.286, whole genome shotgun sequence.
ACCESSION   DAKPJH010000281 DAKPJH010000000
VERSION     DAKPJH010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.286"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>531
                     /gene="pmtB"
                     /locus_tag="OY092_002828"
     CDS             <1..>531
                     /gene="pmtB"
                     /locus_tag="OY092_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtB"
                     /protein_id="HCX1077684.1"
                     /translation="LLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHLFRLN
                     RRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEANVIEPNSIYF
                     STAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVL
                     SQSSFPDLYSYILNIG"
BASE COUNT          160 a           76 c           68 g          227 t
ORIGIN      
        1 tctattatta accttatatc ctttttatat aatgcttgac tcaacaaagt tcttttacct
       61 attgcaatct tttataagtc caacaatatt gattatttgg attttagatg ctggtcactt
      121 atttagactc aatcgtagat taggtggtaa tgattcatat tatttttata tgagtttacc
      181 agtgtcaaaa aaacaattgc ttaatgccaa ctatattaca tgcattgttt taacattaat
      241 tggaacgctt gttattagtt tatatgctta tgaagcaaat gtgattgaac caaattcaat
      301 ctatttttca actgcatatg catttgtcat atctaacttc ttgtctatac caattgcatt
      361 tagtcaattt acagaattgc gtagagtcaa agtgccatat ggtatatacg tgtttactat
      421 tatcatttta gttccatttt tattttcaat tgcaatagtg ttggtgaatt attttgttct
      481 aagtcaatca tcattcccag atttatattc atatatttta aatattggtt t
//
LOCUS       DAKPJH010000282          515 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.287, whole genome shotgun sequence.
ACCESSION   DAKPJH010000282 DAKPJH010000000
VERSION     DAKPJH010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.287"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..515
                     /locus_tag="OY092_002829"
                     /pseudo
     CDS             1..515
                     /locus_tag="OY092_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
BASE COUNT          230 a           68 c           78 g          139 t
ORIGIN      
        1 aagtattcaa aatcacgaat cgaaattgaa cgaaaattca agagcattat atcgtgactt
       61 agttgaagaa aaaataatac cagagataaa agaagatgga gatagcgatt taacaataga
      121 agaaatagat ttaattggta gtcatttaga taaagaaatc gaagatttaa atcattctat
      181 tgagaacgaa gattgtgctc aaattagaaa acagacctgt aaaaaagaac tgagattaag
      241 aagttcaaaa agaaatttga tgattattcc gaaagaaaaa ataaatatga agaacaaaaa
      301 tcgattctta aagatagaaa tagcttttct aaaactgatc atgatgcaac ttttatgaga
      361 atgaaggaag accatatgaa aaatggccaa cttaagccag gatacaattt acaaatagcg
      421 acaaattctc aattttttat cctatgacct atttcaaacc ccaacagata ctagaacttt
      481 aattccattt ttaacaatga ttcaaaatac cttcg
//
LOCUS       DAKPJH010000283          513 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.288, whole genome shotgun sequence.
ACCESSION   DAKPJH010000283 DAKPJH010000000
VERSION     DAKPJH010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.288"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>513
                     /locus_tag="OY092_002830"
     CDS             <1..>513
                     /locus_tag="OY092_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCX1077685.1"
                     /translation="DDLAKQYDKVSQEQGENSAEAQKLRQEYNKQANELNYLERELQK
                     TSAEFEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTAP
                     VLGIAAASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVYGNFPADAETVGGVL
                     GEVNTRLGFT"
BASE COUNT          191 a           73 c          125 g          124 t
ORIGIN      
        1 ttgatgattt agccaagcaa tatgacaagg tatctcaaga acagggcgaa aacagtgcag
       61 aagctcaaaa gttacgacaa gaatataaca aacaagcaaa tgagctgaat tatttagaaa
      121 gagaattaca aaaaacatca gccgaatttg aagagttcaa aaaagctcaa gttgaagctc
      181 aaagaatggc agaaagtggc tggggaaaaa ccagtaaagt ttttgaaagt atgggaccta
      241 aattaacaaa aatgggtgat ggtttaaaat ccattggtaa aggtttgatg attggtgtaa
      301 ctgcacctgt tttaggtatt gcagcagcat caggaaaagc ttttgcagaa gttgataaag
      361 gtttagatac agttacccaa gcaacaggag caaccggcgg agagcttaag aagttgcaga
      421 attcatttaa agatgtttat ggcaactttc cagcagacgc tgagactgta ggcggtgttt
      481 taggggaagt taacacaagg ttaggtttca ctg
//
LOCUS       DAKPJH010000284          513 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.289, whole genome shotgun sequence.
ACCESSION   DAKPJH010000284 DAKPJH010000000
VERSION     DAKPJH010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.289"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>513
                     /locus_tag="OY092_002831"
     CDS             <1..>513
                     /locus_tag="OY092_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCX1077686.1"
                     /translation="DDLAKQYDKVSQEQGENSTKAQNLRQEYNKQANELNFLEKELEK
                     TTAEFEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTTP
                     VLGIAAASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVYGNFPEDAETVGGVL
                     GEVNTRLGFT"
BASE COUNT          196 a           66 c          124 g          127 t
ORIGIN      
        1 ttgatgattt agcgaagcaa tatgataagg tatctcaaga acagggtgaa aatagtacaa
       61 aagctcagaa tttaagacaa gaatataaca aacaagcaaa tgagctgaat tttttagaaa
      121 aagaactaga aaaaacaaca gctgagtttg aagagttcaa aaaagcacaa gttgaagctc
      181 aaagaatggc tgaaagtggc tggggaaaaa ccagtaaagt ttttgaaagt atgggaccta
      241 aattaacaaa aatgggtgat ggtttaaaat ccattggtaa aggtttgatg attggtgtaa
      301 ctacacctgt attaggtatt gcagcagcat caggaaaagc ttttgcagaa gttgataaag
      361 gtttagatac agttacccaa gcaacaggag caaccggcgg agagcttaag aagttgcaga
      421 attcatttaa agatgtttat ggcaactttc cagaagacgc tgagactgta ggcggtgttt
      481 taggggaagt taacacaagg ttaggtttca ctg
//
LOCUS       DAKPJH010000285          495 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.290, whole genome shotgun sequence.
ACCESSION   DAKPJH010000285 DAKPJH010000000
VERSION     DAKPJH010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.290"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            203..451
                     /locus_tag="OY092_002832"
     CDS             203..451
                     /locus_tag="OY092_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077687.1"
                     /translation="MLILKIKEINDKSVTYKYFPNNDENIKPGIIQMDIDSLEVINAE
                     KSSLEKNTRDNYFIHAIDRIYINASKGLFPESELVAWG"
BASE COUNT          213 a           49 c           77 g          156 t
ORIGIN      
        1 tgatcctgac ttttatatgg ctcaaagttg gcaacgttta agagaaggga aaaatattaa
       61 aaaaatggat ataataacgt agaaacatga agctcttgaa cactatctaa tgaataagta
      121 taatttacac tatatagagg cacataaact tacagaaata aaatataatt atagtatttt
      181 aattaattag aggtggaaat gattgctaat attaaaaata aaagaaatta atgataaaag
      241 tgttacatat aaatattttc ctaataatga tgaaaatatt aagcctggta ttattcaaat
      301 ggatatagat agtcttgaag ttatcaatgc tgaaaaatct agtttagaaa aaaatacaag
      361 agataattat tttattcatg ccatagacag aatatacata aatgctagta aagggctatt
      421 tcctgaatct gaactcgtag catggggata aagaaagttt actttaaaaa ttttaacctt
      481 caaatgtgaa ggtta
//
LOCUS       DAKPJH010000286          487 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.291, whole genome shotgun sequence.
ACCESSION   DAKPJH010000286 DAKPJH010000000
VERSION     DAKPJH010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.291"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..254)
                     /locus_tag="OY092_002833"
     CDS             complement(<1..254)
                     /locus_tag="OY092_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCX1077688.1"
                     /translation="MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVA
                     DTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQ"
BASE COUNT          162 a           72 c           64 g          189 t
ORIGIN      
        1 atttgctcgt caattttctt atcgttaact ttatttttat atttatcagc taaaatttta
       61 tttaacattt cagtaaacga tgcatttgca atttgatctt taccgatttt tttcattgta
      121 tctgcaactg ttacatctcc agctttagaa gaaattaatg tattttcttt agagtctgtg
      181 gcactagcgc cacaagcgcc taataataaa gcactagctg ttactggaac gattaatttg
      241 tttatcatct tcatagttga aactcctttg taagttaatc atcgtgaata taacatagtt
      301 ttatattatc accaatcaat aacccatgac atcagactag agcattaggt ttaggggtag
      361 aaattgatga aaataaaaaa acaaggtcta tatacatttg attttaagct attacatagc
      421 tgaaaaacaa ataataacac cttgctataa ttattttgtt ataaatgata tggattttta
      481 atttttt
//
LOCUS       DAKPJH010000287          485 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.292, whole genome shotgun sequence.
ACCESSION   DAKPJH010000287 DAKPJH010000000
VERSION     DAKPJH010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.292"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..444
                     /locus_tag="OY092_002834"
     CDS             <1..444
                     /locus_tag="OY092_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP pyrophosphatase"
                     /protein_id="HCX1077689.1"
                     /translation="SAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLV
                     IETGKIDAGYHGNLGINIKNDNETLESEYISNFGRSPSGIDGQYALLPVTDKILCMNG
                     SYVINKGDKLAQLVIVPIWTPELKQVEEFESVSERGAKGFGSNGV"
BASE COUNT          167 a           69 c          126 g          123 t
ORIGIN      
        1 tcagctgaaa ctgtcgtact tgagccacaa gaaaaggcag tgattaaaac agatgtagct
       61 gtaagcatac cagagggcta tgtcgggcta ttaactagcc gtagtggtgt aagtagtaaa
      121 acacatttag tgattgaaac aggcaagata gacgcgggat atcatggcaa tttagggatt
      181 aatatcaaga atgataatga aacgttagag agtgagtata taagtaactt tggacgtagt
      241 ccttctggta tagacggaca atatgcccta ctacctgtaa cagataaaat tttatgtatg
      301 aatggtagtt atgtcataaa caaaggcgac aaactagctc aattggttat tgtgcctata
      361 tggacaccgg aactaaagca agtggaggaa ttcgagagtg tttcagaacg tggagcaaaa
      421 ggcttcggaa gtaacggagt gtaaagacat cttagatcga gttaaggagg ttttggggaa
      481 gtgac
//
LOCUS       DAKPJH010000288          469 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.293, whole genome shotgun sequence.
ACCESSION   DAKPJH010000288 DAKPJH010000000
VERSION     DAKPJH010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.293"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            238..320
                     /locus_tag="OY092_002835"
     tRNA            238..320
                     /locus_tag="OY092_002835"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:271..273,aa:Leu,seq:gag)
     gene            342..415
                     /locus_tag="OY092_002836"
     tRNA            342..415
                     /locus_tag="OY092_002836"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:374..376,aa:Gly,seq:tcc)
BASE COUNT          174 a           71 c           81 g          143 t
ORIGIN      
        1 taaaaaagaa caaattaaat aaactttgat ttgaaagaca gtcaattcta aatttaattt
       61 ataaaatatg ttgacaataa gttcttaatg ttttattata aatagcgttg tgttaacaac
      121 tgataacaca aattaattta atgtaaaaaa acgattaaaa gttattgaca aatattttta
      181 aacataatat aataaataac gttctaaaaa acgaagatgt tttaaatgcc tatatccgcg
      241 gtcgtggcgg aatggcagac gcgctaggtt gagggcctag tgggagaaat cccgtggagg
      301 ttcaagtcct ctcggccgca tcaaaattct taattaaata agcgggtgta gtttaatggc
      361 aaaacctcag ccttccaagc tgatgttgtg ggttcgattc ccatcacccg ctccatagat
      421 aattttaatg aacattgaaa actgaatgac aatatgtcaa cgttaattc
//
LOCUS       DAKPJH010000289          452 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.294, whole genome shotgun sequence.
ACCESSION   DAKPJH010000289 DAKPJH010000000
VERSION     DAKPJH010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.294"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>452
                     /locus_tag="OY092_002837"
     CDS             <1..>452
                     /locus_tag="OY092_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077690.1"
                     /translation="EQKFYYKRILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKG
                     YQQMSPKGTTRFETKAGHQAQFDWKEGINFKTKDNQIVSLNIGVLLLPYSRFVIMQVT
                     MNKSSDVLFNLLTQAFELMGGVPNELVTDNMKTVMDQPRTERTNGQINR"
BASE COUNT          161 a           73 c           87 g          131 t
ORIGIN      
        1 gaacaaaagt tctactataa gcgtattctt tggcaatatt tgaaggataa acatgggtta
       61 acgtgtgcct attctacatt tagagcttat atccttaaac atgatgagtt taatcgttat
      121 tttatgaaag gttatcaaca gatgtcgcct aaaggcacaa cgagattcga gacaaaagcc
      181 ggtcatcaag cacagtttga ctggaaagaa ggtattaact ttaaaacgaa ggataatcaa
      241 atcgtttcac taaatatagg cgtactacta cttccttatt cccgttttgt aatcatgcaa
      301 gtgacaatga ataaatcaag tgatgtctta tttaatttat tgacacaagc gtttgagcta
      361 atgggaggtg tgcctaatga acttgtaacg gataacatga aaacggtcat ggatcaacca
      421 agaacagaac gtacaaatgg tcaaataaat cg
//
LOCUS       DAKPJH010000290          452 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.295, whole genome shotgun sequence.
ACCESSION   DAKPJH010000290 DAKPJH010000000
VERSION     DAKPJH010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.295"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>452
                     /locus_tag="OY092_002838"
     CDS             <1..>452
                     /locus_tag="OY092_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077691.1"
                     /translation="EQKFYYKRILWQYLKDKHGLMCAYSTFRAYILKHDEFNRYFMKG
                     YQQMSPKGTPRFETKAGHQAQFDWKEGINFKTKDNQIVSLNIGVLLLPYSRFVIMQVT
                     MNKSSDVLFNLLTQAFELMGGVPNELVTDNMKTVMDQPRTERTNGQINR"
BASE COUNT          161 a           75 c           86 g          130 t
ORIGIN      
        1 gaacaaaagt tctactataa gcgtattctt tggcaatatt tgaaggataa acatgggtta
       61 atgtgtgcct attctacatt tagagcttat atccttaaac atgatgagtt taatcgttat
      121 tttatgaaag gttatcaaca gatgtcgcct aaaggcacac cgagattcga gacaaaagcc
      181 ggtcatcaag cacagtttga ctggaaagaa ggcattaact ttaaaacgaa ggataatcaa
      241 atcgtttcac taaatatagg cgtactacta cttccttatt cccgctttgt aatcatgcaa
      301 gtgacaatga ataaatcaag tgatgtctta tttaatttat tgacacaagc gtttgagcta
      361 atgggaggtg tgcctaatga acttgtaaca gataacatga aaacggtcat ggatcaacca
      421 agaacagaac gtacaaatgg tcaaataaat cg
//
LOCUS       DAKPJH010000291          435 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.296, whole genome shotgun sequence.
ACCESSION   DAKPJH010000291 DAKPJH010000000
VERSION     DAKPJH010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.296"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(186..413)
                     /locus_tag="OY092_002839"
     CDS             complement(186..413)
                     /locus_tag="OY092_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077692.1"
                     /translation="MKNYYHLLSFDDDLANDAANDLLKEGWDIVHVGTKLVKILDNGQ
                     AYYNTEYVLGGTKNQYEKYLEDCQQSELDYF"
BASE COUNT          167 a           74 c           53 g          141 t
ORIGIN      
        1 tatgaaagaa ctttattctt taaaaatcca aaagaagaat ttaaataata aacaaaagaa
       61 tttaatgtct gtaattaatc aatgtattga actagaaaag ttttcttaca ctgaaattaa
      121 aaaagttctc tacctaattg atagagaaca aaagtattta gctaataacc gcagaaaaac
      181 ataagttaaa aataatctaa ctcggactgc tggcaatctt ctaaatattt ttcatactga
      241 tttttagttc cgcccagaac gtattcagta ttgtagtacg cttgtccatt atccaaaatt
      301 ttaactaatt ttgtaccaac atgaacgata tcccaacctt cttttaacag atcgttggct
      361 gcatcattag ctaaatcatc atcgaaagac aaaagatgat agtagttttt cataatacca
      421 cctccttcca ttagg
//
LOCUS       DAKPJH010000292          433 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.297, whole genome shotgun sequence.
ACCESSION   DAKPJH010000292 DAKPJH010000000
VERSION     DAKPJH010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.297"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..167
                     /locus_tag="OY092_002840"
     CDS             <1..167
                     /locus_tag="OY092_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCX1077693.1"
                     /translation="IFTTNINFNLWNEIFDDPKIANAILDRILHHSSVVKIKGKSYRL
                     KDHSPKKEIT"
BASE COUNT          130 a           88 c           55 g          160 t
ORIGIN      
        1 caatatttac cacaaatatc aatttcaact tatggaatga aatatttgat gaccccaaaa
       61 tcgcaaatgc gattttggat aggatattac atcattcaag tgtagttaaa atcaaaggca
      121 aatcgtatag attaaaagat cattcaccta agaaggaaat tacttagcaa acaattttgt
      181 acattcttat acaatcattt atgtacattt ttatattgac atttacatct tgacttatgc
      241 ttctttcctc tccttcggct ctcgcttact catttagctc tactaaactc gttgcactct
      301 tttctcgttt cgtcagattc aaacgttttc acttcgccaa gccatttttc tttgtgtttg
      361 ctttttattt tgacgtttta gacataaaaa aaagagacct cacggtctca atgcggctca
      421 tcgcatccat ttt
//
LOCUS       DAKPJH010000293          418 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.298, whole genome shotgun sequence.
ACCESSION   DAKPJH010000293 DAKPJH010000000
VERSION     DAKPJH010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.298"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>418
                     /locus_tag="OY092_002841"
     CDS             <1..>418
                     /locus_tag="OY092_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077694.1"
                     /translation="AYADGKISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANAYT
                     DNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTD
                     GTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNRE"
BASE COUNT          176 a           65 c           87 g           90 t
ORIGIN      
        1 aagcgtatgc tgatggtaaa atttcggaag aagagcaacg cgctatacaa gatgctcaag
       61 ctaaacttga agaggcaaaa caaaacgcag aactaaaggc tagaaacgct gaaaagaaag
      121 ctaatgctta tacagacaac aaggtcaaag aaagcacaga tgcacagagg agaacactga
      181 ctcgctatgg ttctcaaatt atacaaaatg gtaaggaaat caaattaaga actactaaag
      241 aagagtttaa tgcaaccaat cgtacacttt caaatatatt aaacgagatt gtccaaaacg
      301 ttacagatgg aacaacaatc agatatgatg ataacggagt ggctcaagct ttaaatgtgg
      361 ggccacgtgg tattagatta aatgctgata aaattgatat taacggtaat agagaaat
//
LOCUS       DAKPJH010000294          412 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.299, whole genome shotgun sequence.
ACCESSION   DAKPJH010000294 DAKPJH010000000
VERSION     DAKPJH010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.299"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..257
                     /locus_tag="OY092_002842"
     CDS             <1..257
                     /locus_tag="OY092_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HCX1077695.1"
                     /translation="FMKYNVKGFKEIQFEEQKENPMDGYSISGYINNDKKLSFTAGIR
                     SVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQNTSNK"
BASE COUNT          167 a           40 c           62 g          143 t
ORIGIN      
        1 tatttatgaa atataatgtt aaagggttta aagaaataca attcgaggaa caaaaagaaa
       61 acccaatgga tggttattct attagtggtt atataaataa tgataaaaag ttatcattta
      121 cagctggtat aagatctgtt gatgattttc aatttgatac cgatatttct tatacagatg
      181 aattgggtag aaaatttaat aaaaatccta agtcagtttc tgaaataaag aaagagcaaa
      241 atacgtccaa taaataattg ttcatattgt gatgaaacaa aaatataagt cattagatga
      301 atttaactat gttataaata tttgtagtat ctataaaaat ctcgacacta ttaaaatgat
      361 atagtgccga ggttttctta cttatttagt taattcaaag tttatgccag at
//
LOCUS       DAKPJH010000295          403 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.300, whole genome shotgun sequence.
ACCESSION   DAKPJH010000295 DAKPJH010000000
VERSION     DAKPJH010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.300"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..101
                     /locus_tag="OY092_002843"
     CDS             <1..101
                     /locus_tag="OY092_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000988331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCX1077696.1"
                     /translation="DLNNLETLCIKCHNKKEKRFIKKENKWKDEKW"
     gene            231..>403
                     /locus_tag="OY092_002844"
     CDS             231..>403
                     /locus_tag="OY092_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077697.1"
                     /translation="MEIIVDENLVLKEKERLQVLYKDIPSNKLKVVDGLIIQAARLRV
                     MLDYMWEDIKEKG"
BASE COUNT          176 a           53 c           78 g           96 t
ORIGIN      
        1 atgacttaaa caatttagaa acactgtgta ttaaatgtca caacaaaaaa gaaaagagat
       61 ttataaaaaa agaaaataaa tggaaagacg aaaaatggta aatacccccg ggtcaaaaaa
      121 atcaaaagcg atcaaaatac ttggggaacg agcaggggct cgacttcgcg ataattttaa
      181 aaatccatgt ataacccccc tcttataacc attttaaggc aggtgatgaa atggagatta
      241 tagttgatga aaacttagtg cttaaagaaa aagaaaggct gcaagtatta tataaagaca
      301 tacctagcaa taaattaaaa gtagttgatg gtttaattat tcaagcagca aggctacgtg
      361 taatgcttga ttacatgtgg gaagacataa aagaaaaagg tga
//
LOCUS       DAKPJH010000296          399 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.301, whole genome shotgun sequence.
ACCESSION   DAKPJH010000296 DAKPJH010000000
VERSION     DAKPJH010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.301"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(58..273)
                     /locus_tag="OY092_002845"
     CDS             complement(58..273)
                     /locus_tag="OY092_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077698.1"
                     /translation="MSINIDPEKFAELVVMSNPSKFEDAEDIAKESLKLYINAYRLAE
                     RYSTIATNCYDTAEVIKELKKTDLQLK"
BASE COUNT          128 a           54 c           47 g          170 t
ORIGIN      
        1 ttagggattt atgtcccagc ctctgtaata ttaattagga tttatttcta agttgagtta
       61 ttttaattgt aaatctgttt tctttaattc ttttataact tctgcagtat cataacaatt
      121 tgttgcaatt gttgaatatc tctctgctaa acgatatgca ttaatgtaaa gctttaaact
      181 ttctttagct atatcctctg catcttcgaa ttttgatggg ttagacataa ccactaattc
      241 tgcaaatttt tctggatcaa tattaataga catgtattta tttacaactc ctatttattt
      301 tgatgtctta atactaacat attgaagttt tcagacaaag taatgtctct ttataattga
      361 agaaaaataa ttcaaagaat ttaatattta ctttaaata
//
LOCUS       DAKPJH010000297          387 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.302, whole genome shotgun sequence.
ACCESSION   DAKPJH010000297 DAKPJH010000000
VERSION     DAKPJH010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.302"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>387
                     /locus_tag="OY092_002846"
     CDS             <1..>387
                     /locus_tag="OY092_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001573791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HCX1077699.1"
                     /translation="TINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETK
                     LQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNVNYKEEKLLPEETIDRIFEDLTTN
                     HPLLADLGIKNAGLRLKFLKSETSGVA"
BASE COUNT          155 a           58 c           69 g          105 t
ORIGIN      
        1 gactataaat ttatcggaaa cattcgcaaa tgcgaaaaac gaatttatta atgcagtaaa
       61 caacggtgaa ccgcaagaaa gacaaaatga attgtacggt gacatgatta accaactatt
      121 tgaagaaact aaattacaag caaaagcaga agctgaaaga gtttctagtt tacctaaatc
      181 agcacaatct ttgagtgcaa accaaagaag tttcttcatg gatatcaata aaaacgttaa
      241 ctataaagaa gaaaaacttt tgccagaaga aacaattgat agaatttttg aagatttgac
      301 gacgaatcat ccgttattag ctgatttagg tattaaaaac gctggtttgc gtttgaagtt
      361 cttaaaatct gaaacttctg gcgtagc
//
LOCUS       DAKPJH010000298          385 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.303, whole genome shotgun sequence.
ACCESSION   DAKPJH010000298 DAKPJH010000000
VERSION     DAKPJH010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.303"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..357)
                     /locus_tag="OY092_002847"
     CDS             complement(<1..357)
                     /locus_tag="OY092_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001820629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HCX1077700.1"
                     /translation="MLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHL
                     RAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAAE
                     TLEHVGQIMAEAYAVRA"
BASE COUNT          105 a           89 c           61 g          130 t
ORIGIN      
        1 agctctaacc gcatatgcct cagccattat ttgaccaaca tgttctaatg tttctgcagc
       61 atgatttaga tctttcgctt ctccttgcgc aatacttgaa ggattgtgaa tcatcattct
      121 agcaaccgga ctcatttcga tgtggtcacc agccattgcg ataagcgatg ccgcacttgc
      181 tgctattgct gtgatacgaa cattcacttt gcctttatga gctcttaaat gtgtatatat
      241 ttcactacca gctactaggt taccaccatt tgagttaatt ataatatcaa catcttcatc
      301 actaaattct agttgtgtta aaacatcttt aggacaagtc gaatccatac caagcatttc
      361 gtaaacccat ttatcttcgt tggaa
//
LOCUS       DAKPJH010000299          375 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.304, whole genome shotgun sequence.
ACCESSION   DAKPJH010000299 DAKPJH010000000
VERSION     DAKPJH010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.304"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>375
                     /locus_tag="OY092_002848"
     CDS             <1..>375
                     /locus_tag="OY092_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding protein"
                     /protein_id="HCX1077701.1"
                     /translation="GPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFRHDYN
                     IVEYNDGTFGYGPRPHFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQK
                     AVNLVSFEYNVKKMILQERIDEV"
BASE COUNT          159 a           56 c           65 g           95 t
ORIGIN      
        1 ggtccaagag aaaagaaacc agtgagtatt aatcacaata tcgtagagta caatgatggt
       61 acttttaaat atcaatctag accaaaattt aactcaacac ctaaatatat taagtttaga
      121 catgattata acattgtgga atataatgac ggtacatttg gatatggacc acgtccgcat
      181 tttaataaac cagcagcgaa aactgatgca actataaaaa aagaacaaaa attgattcaa
      241 gctcaaaatc ttgtgagaga atttgaaaag acccatactg tgagcgcaca tagaaaagca
      301 caaaaggcag tcaacttagt atcatttgaa tacaatgtta agaaaatgat attgcaagag
      361 cgaattgatg aagta
//
LOCUS       DAKPJH010000300          365 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.305, whole genome shotgun sequence.
ACCESSION   DAKPJH010000300 DAKPJH010000000
VERSION     DAKPJH010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.305"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>365)
                     /locus_tag="OY092_002849"
     CDS             complement(<1..>365)
                     /locus_tag="OY092_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="structural protein"
                     /protein_id="HCX1077702.1"
                     /translation="RDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNRYVQIQNDS
                     IELGGIVQRTWRGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDG
                     GSSGTIQWWDKTYSDSGMNG"
BASE COUNT          106 a           87 c           50 g          122 t
ORIGIN      
        1 ccattcatgc cactatcact gtaagtttta tcccaccatt gaatcgtacc agatgaacca
       61 ccgtcttcac cttcaccatc aatataagtc gaaataccaa aatgtgacat ataaagtgaa
      121 ccgccagcgg tgttatttct aaatcttagg tgaccgtctt tcagtcgcgt aaaaatatcg
      181 tctgttgaac gtttccctct ccaagtacgt tgcacaatac cacctagttc aatagaatca
      241 ttctgtattt gaacatatct gttattgtta ccgcctttaa ttccaattct attaacattg
      301 atatcaagac cctctcttga taaattaagg ctgttgacaa tatcggtttt atctacttta
      361 tctcg
//
LOCUS       DAKPJH010000301          365 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.306, whole genome shotgun sequence.
ACCESSION   DAKPJH010000301 DAKPJH010000000
VERSION     DAKPJH010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.306"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>365
                     /locus_tag="OY092_002850"
     CDS             <1..>365
                     /locus_tag="OY092_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="structural protein"
                     /protein_id="HCX1077703.1"
                     /translation="RDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNRYVQIQNDS
                     IELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDG
                     GSSGTIQWWDKTYSDSGMNG"
BASE COUNT          130 a           51 c           82 g          102 t
ORIGIN      
        1 cgagataaag tagataaaac cgatattgtc aacagcctta atttatcaag agagggtctt
       61 gatatcaatg ttaatagaat tggaattaaa ggcggtaaca ataacagata tgttcaaata
      121 cagaatgatt ctattgaact aggtggtatt gtgcaacgaa cttggaaagg caaacgatca
      181 accgatgata tattcacacg tcttaaagat ggacatctaa ggtttagaaa taataccgca
      241 ggcggttcac tttatatgtc acattttggt atttcaacat atattgatgg agaaggcgaa
      301 gacggaggtt catccggtac tattcaatgg tgggataaaa cttacagtga tagcggtatg
      361 aatgg
//
LOCUS       DAKPJH010000302          348 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.307, whole genome shotgun sequence.
ACCESSION   DAKPJH010000302 DAKPJH010000000
VERSION     DAKPJH010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.307"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT          112 a           51 c           62 g          123 t
ORIGIN      
        1 tgtgacaaac gcaatatatt gtgtcgcaaa agtgtgacat ttcgtctttt tatgccccca
       61 tgcaaaaaga ccgacgaagt cttgaaatat ctggctttgc cagatccccc attcattgat
      121 ggggacaaat ttcccttatg ctcttacgga gattttagag ttaaattaaa atttctaagt
      181 ttttgataag aaaagccctg caggaattta gaaaaacatg gggaagtttt aaagtatttt
      241 atgctaattt ttaaatttgc atgtaaatgg gcagtatata aaaaaatagt cactggtttt
      301 gctcaaattt ttgtttttga aaatagcata tatttatttg gctcatat
//
LOCUS       DAKPJH010000303          338 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.308, whole genome shotgun sequence.
ACCESSION   DAKPJH010000303 DAKPJH010000000
VERSION     DAKPJH010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.308"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>338
                     /locus_tag="OY092_002851"
     CDS             <1..>338
                     /locus_tag="OY092_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCX1077704.1"
                     /translation="IETSVRIPQNWKYDEFNDEFICPNNKRIGFKRYAYRNDRYGFKR
                     DFKLYERDDCSACSLRHQCMKPNLKSNKKIMKNYNWEYFKAQINQKLSKPETKKIYSQ
                     RKIDVEPVFG"
BASE COUNT          137 a           44 c           57 g          100 t
ORIGIN      
        1 aatagaaact tctgttagaa ttcctcaaaa ttggaaatat gacgaattta atgatgagtt
       61 tatatgtcct aataacaaaa gaataggttt taaaagatat gcgtaccgta atgatagata
      121 tggttttaaa cgtgacttca agctatatga acgcgatgac tgttcagcat gttctttgag
      181 acatcaatgc atgaagccaa atttgaaatc caataagaaa atcatgaaga attataattg
      241 ggaatacttt aaagcccaaa ttaatcaaaa gctttctaaa ccagaaacga aaaaaatcta
      301 tagtcaaaga aaaattgatg tagagcctgt ttttggat
//
LOCUS       DAKPJH010000304          332 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.309, whole genome shotgun sequence.
ACCESSION   DAKPJH010000304 DAKPJH010000000
VERSION     DAKPJH010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.309"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>332
                     /locus_tag="OY092_002852"
     CDS             <1..>332
                     /locus_tag="OY092_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HCX1077705.1"
                     /translation="EGPIKLHKEFTIPVKFTIKVVLTDPYKYSVTGNKNTAISDQVSV
                     VNSGTADTPLIVEARAIKPSSYFMITKNDEDYFMVGDDEVTKEVKDYMPPVYHSEFRD
                     FKGWTKMIT"
BASE COUNT          118 a           53 c           62 g           99 t
ORIGIN      
        1 gaaggaccaa taaagctgca caaagaattt acaatacctg ttaagttcac tatcaaagta
       61 gtactaacag acccttacaa atattcagta acaggaaata aaaatactgc gatttcagac
      121 caagtttcag ttgtaaatag tgggactgct gacactcctt taattgttga agcccgagca
      181 attaaaccat ctagttactt tatgatcact aaaaatgatg aagattattt tatggttggt
      241 gatgatgagg taaccaaaga agttaaggat tacatgcctc ctgtttatca tagtgagttt
      301 cgtgatttca aaggttggac taagatgatt ac
//
LOCUS       DAKPJH010000305          331 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.310, whole genome shotgun sequence.
ACCESSION   DAKPJH010000305 DAKPJH010000000
VERSION     DAKPJH010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.310"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT          150 a           50 c           41 g           90 t
ORIGIN      
        1 cttattaaat gaaaattaat aaattatcaa attgacatac cttattgtat ttatagaaaa
       61 acaaaaaaag gtaagcaccg aaatgcttac ctacttccca taaacaatat aacacatata
      121 cattgatttg gaaagcgcaa aaataaattt aatatactag cccgaagggg agcaatacat
      181 aaaaaatgaa aggcgctcct tgaaaacgcc caaggtaata ttaacataaa atagctacta
      241 ttgcattatc taattttatt taattaaaac aaatatatat agcacaaaaa aactagcccg
      301 aaggctagct tatgaataga tgaaaatttg a
//
LOCUS       DAKPJH010000306          325 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.311, whole genome shotgun sequence.
ACCESSION   DAKPJH010000306 DAKPJH010000000
VERSION     DAKPJH010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.311"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT          142 a           25 c           49 g          109 t
ORIGIN      
        1 gttttttatc agagatcctt ctgaaatttc tttgaaaata aagcaaactg aaaattttag
       61 aaaacttaaa agggtttaaa gcgaagattt agttaatact tttaaaaaag tccaaaaata
      121 ggtaatacaa ctttaaataa agttccaagt gctgtatatt ttatgtaatt ttgtgtaggt
      181 ttagatatta aaaaagtata gttaaaatag ggaattcatc aaaaaaagta agtgcattat
      241 ttaataaaga agtgaaaata gaatgggtaa aagaaacact gattcaatat aaaagtattg
      301 aaccatgtaa ttttaataat gattt
//
LOCUS       DAKPJH010000307          320 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.312, whole genome shotgun sequence.
ACCESSION   DAKPJH010000307 DAKPJH010000000
VERSION     DAKPJH010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.312"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(55..>320)
                     /locus_tag="OY092_002853"
     rRNA            complement(55..>320)
                     /locus_tag="OY092_002853"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT           79 a           83 c           71 g           87 t
ORIGIN      
        1 atatgtcacg ttattccgca tcttctgaag aagatgttcc gaatatatcc ttagaaagga
       61 ggtgatccag ccgcaccttc cgatacggct accttgttac gacttcaccc caatcatttg
      121 tcccaccttc gacggctagc tcctaaaagg ttactccacc ggcttcgggt gttacaaact
      181 ctcgtggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgt agcatgctga
      241 tctacgatta ctagcgattc cagcttcatg tagtcgagtt gcagactaca atccgaactg
      301 agaacaactt tatgggattt
//
LOCUS       DAKPJH010000308          319 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.313, whole genome shotgun sequence.
ACCESSION   DAKPJH010000308 DAKPJH010000000
VERSION     DAKPJH010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.313"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..284)
                     /locus_tag="OY092_002854"
     CDS             complement(<1..284)
                     /locus_tag="OY092_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077706.1"
                     /translation="MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISS
                     ERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGYTEIECIASYLADITT"
BASE COUNT           96 a           65 c           47 g          111 t
ORIGIN      
        1 gttgttatat cagcaagata agacgctata cattctatct ctgtgtagcc gtccatcgta
       61 tcttgaaccc agttaataat aaattcacgc cattgtttgt ttgaatccct tataataaca
      121 cgatgtcgtt cacggaactt ttcagctctt tctgatgata tgagcagttc aagcatttct
      181 gaattgtcat taacattacg tttatgaatc gctctaacta aggaagggtc atcagtagaa
      241 aggaaatcta taatcttgtc gttaaaatct aaaacatgta tcacactctc atctcctttc
      301 tataaatatc tatcttgcc
//
LOCUS       DAKPJH010000309          317 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.314, whole genome shotgun sequence.
ACCESSION   DAKPJH010000309 DAKPJH010000000
VERSION     DAKPJH010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.314"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..180
                     /locus_tag="OY092_002855"
     CDS             <1..180
                     /locus_tag="OY092_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1024 family protein"
                     /protein_id="HCX1077707.1"
                     /translation="LKEIEDVYKKAQAFDEILEGMTNAIQHSVKEGIELDEAVGIMTG
                     QVVYKYEEEQEDEKI"
     gene            167..>317
                     /locus_tag="OY092_002856"
     CDS             167..>317
                     /locus_tag="OY092_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077708.1"
                     /translation="MKKFNVQITYTGMIEETIEAESLDEAEFEAHDIARMEVPFDCDE
                     FEINVE"
BASE COUNT          118 a           33 c           83 g           83 t
ORIGIN      
        1 ctaaaagaga ttgaggacgt atataagaaa gcgcaagcgt ttgatgaaat acttgaggga
       61 atgacaaatg ctattcaaca ttcagttaaa gaaggtattg aacttgatga agcagtaggg
      121 attatgacgg gtcaagttgt ctataaatat gaggaggagc aggaagatga aaaaatttaa
      181 tgttcaaatc acatacactg gcatgattga agagactatc gaggctgaaa gtttagacga
      241 agcagaattt gaggctcatg atattgcgag aatggaagtg ccatttgatt gtgatgaatt
      301 tgaaattaat gtagagg
//
LOCUS       DAKPJH010000310          315 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.315, whole genome shotgun sequence.
ACCESSION   DAKPJH010000310 DAKPJH010000000
VERSION     DAKPJH010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.315"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>315
                     /locus_tag="OY092_002857"
     CDS             <1..>315
                     /locus_tag="OY092_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001209857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077709.1"
                     /translation="VIFDNGKEINFSNATPIIFAQYLKIELKKRNIIVDINNYFNSTV
                     ISFAHDKKYRYKDMYIEKYNEIIKVMSEEDLNEASVLEAKELAKKDMNYNFKISEYRA
                     TM"
BASE COUNT          135 a           25 c           53 g          102 t
ORIGIN      
        1 aagttatatt tgataacggg aaagaaatta atttttctaa tgcaacgcca attatcttcg
       61 cacaatattt gaaaattgaa ttgaaaaaga gaaatataat tgtagatatt aataattatt
      121 ttaatagcac tgttatttca tttgcgcatg ataaaaaata tagatataag gatatgtata
      181 ttgaaaaata caatgaaatt attaaagtga tgagtgaaga agatttaaat gaggcatcgg
      241 ttttagaagc taaagagtta gccaagaaag acatgaatta taattttaaa attagtgagt
      301 acagagctac tatga
//
LOCUS       DAKPJH010000311          307 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.316, whole genome shotgun sequence.
ACCESSION   DAKPJH010000311 DAKPJH010000000
VERSION     DAKPJH010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.316"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            122..254
                     /locus_tag="OY092_002858"
                     /pseudo
     CDS             122..254
                     /locus_tag="OY092_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499947.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          118 a           32 c           45 g          112 t
ORIGIN      
        1 gattacgcta ttttagaaaa taaaaaaatt tgtatttctc attagaatta gaatatttaa
       61 aagtgatgag gtttaaaaat tatattgttt acatactcct tttgaattca tacattaaga
      121 aatgttactt gtaagttcaa aatcgcacat tgaaatgatg tgtgaaaatg tttaaactac
      181 ggtcattttg tgaaaataaa gataataact attcatttta caatagtgaa aagtcagtat
      241 atgacaacaa ttaatattgc ggtaaggcct tgtgttacag tattctatat ttaagtactg
      301 caatcag
//
LOCUS       DAKPJH010000312          306 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.317, whole genome shotgun sequence.
ACCESSION   DAKPJH010000312 DAKPJH010000000
VERSION     DAKPJH010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.317"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>306)
                     /locus_tag="OY092_002859"
     CDS             complement(<1..>306)
                     /locus_tag="OY092_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="structural protein"
                     /protein_id="HCX1077710.1"
                     /translation="GVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRF
                     AFTLSNADNAYSSDGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIE
                     "
BASE COUNT           90 a           70 c           50 g           96 t
ORIGIN      
        1 ttcgattgtt gtatctccac ctgttgcata tcgtccatta acaatttgaa caagaccttt
       61 atttctttct ttagaaaacc tgatacccgc accgtaatca tagttctcat cagaaccaaa
      121 cataatataa ccgtcactcg aataagcatt atctgcatta gacagcgtga atgcaaatcg
      181 gtttaatcca ggcactttgt ctgtgtttgg atataaatac accggtgcct gtttgctttt
      241 gatattcgat gaagcgtaag actccagaac aacccgatta ttatctgacg ttagtgcaac
      301 gacacc
//
LOCUS       DAKPJH010000313          305 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.318, whole genome shotgun sequence.
ACCESSION   DAKPJH010000313 DAKPJH010000000
VERSION     DAKPJH010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.318"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>305)
                     /locus_tag="OY092_002860"
     CDS             complement(<1..>305)
                     /locus_tag="OY092_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077711.1"
                     /translation="AVNNWDINAQRGDPSRGLFQIIGSTFRANAKRGYTNFNNPVHQG
                     ISAMQYIVRRYGWDGFKRAGDYAYATGGKVFDGWYNLGEDGHPEWVIPTDPARRNDA"
BASE COUNT           82 a           74 c           52 g           97 t
ORIGIN      
        1 attgcatcat ttctacgagc tggatctgtt ggaataaccc attctggatg accgtcttca
       61 cctaagttat accaaccatc aaaaactttt ccgcctgtag catatgcgta atcacccgca
      121 cgcttaaatc catcccaacc gtagcgtcta acaatgtact gcattgctga aataccttga
      181 tgaaccggat tattaaagtt agtatatcca cgtttagcgt ttgctctaaa agttgagccg
      241 atgatttgga ataatcctct tgatgggtct cctctttgag catttatatc ccagttattc
      301 actgc
//
LOCUS       DAKPJH010000314          303 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.319, whole genome shotgun sequence.
ACCESSION   DAKPJH010000314 DAKPJH010000000
VERSION     DAKPJH010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.319"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>303)
                     /locus_tag="OY092_002861"
     CDS             complement(<1..>303)
                     /locus_tag="OY092_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCX1077712.1"
                     /translation="ESFLKFSHITGSDGVQAVQLITRAMGDAGIEADEYQSVLDMVAK
                     AAQASGISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKA"
BASE COUNT           85 a           76 c           47 g           95 t
ORIGIN      
        1 gcttttttca aaccactgaa ggctatttca gtattaacac ctgatttctc ccattgagag
       61 aataaagcga ttgattcttt catctcaaag cccatagccc tcattggagc accgtattta
      121 gtaatgctat cagctaatgt atcaacactt ataccgctag cctgtgctgc tttcgctacc
      181 atatcaagta cactttgata ctcatcagct tcaatacctg catcacccat tgcacgcgta
      241 attaattgaa cggcttgtac gccgtcagaa cctgttatgt gactaaattt caagaatgac
      301 tct
//
LOCUS       DAKPJH010000315          291 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.320, whole genome shotgun sequence.
ACCESSION   DAKPJH010000315 DAKPJH010000000
VERSION     DAKPJH010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.320"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..291
                     /locus_tag="OY092_002862"
                     /pseudo
     CDS             1..291
                     /locus_tag="OY092_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
BASE COUNT          104 a           51 c           41 g           95 t
ORIGIN      
        1 ttacactacc aatagaaact tctgttagaa ttcctcaaat tgatatttcg cgatatgtta
       61 atgaaattgt tgaaacgata cctaatagtg aattcgatga attcagacac catcgtggcg
      121 caacatctta tcatccaaaa atgatgtaaa aattatctta tatgcataca ctcaatctgt
      181 attttctggt cgtagaatag agaaactact tcatgacagt attcgaatga tgtggttagc
      241 tcaaaatcaa acaccttctt ataaaactat taatcgtttt agagtaaatc c
//
LOCUS       DAKPJH010000316          287 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.321, whole genome shotgun sequence.
ACCESSION   DAKPJH010000316 DAKPJH010000000
VERSION     DAKPJH010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.321"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>287
                     /locus_tag="OY092_002863"
     CDS             <1..>287
                     /locus_tag="OY092_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000982712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077713.1"
                     /translation="STGLKDKNNNEIYAGDIVEFEDEILEMPDDESVIGTINRAVISI
                     DVVNGIQLKDFMFEGAVSENDYFEYIDIKSFLRYDCEVKGNIFESSHLLEVT"
BASE COUNT          110 a           33 c           59 g           85 t
ORIGIN      
        1 agtacaggac ttaaagacaa aaacaacaac gaaatatatg cgggagatat agttgagttt
       61 gaagatgaaa tattagagat gccagacgat gaatctgtaa taggaacaat taatagagca
      121 gtaatatcta ttgatgttgt aaatggtatt caattaaaag attttatgtt tgagggcgca
      181 gtctccgaaa atgattactt tgagtatata gacataaaat ccttccttag atatgactgt
      241 gaggttaaag gcaacatatt tgaatcatca catttattgg aggtaac
//
LOCUS       DAKPJH010000317          286 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.322, whole genome shotgun sequence.
ACCESSION   DAKPJH010000317 DAKPJH010000000
VERSION     DAKPJH010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.322"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>286
                     /locus_tag="OY092_002864"
     CDS             <1..>286
                     /locus_tag="OY092_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GA module-containing protein"
                     /protein_id="HCX1077714.1"
                     /translation="GSKFINEDKPQKDAYQAAVQHAKDLINQTSNPTLDKAQVEQLTQ
                     AVNQAKDNLHGDQKLADDKQHAVTDLNQLNGLNNPQRQALESQINNAATRG"
BASE COUNT          116 a           57 c           51 g           62 t
ORIGIN      
        1 cgggtagcaa gtttatcaat gaagataagc cgcaaaaaga tgcataccaa gcagcagttc
       61 aacatgccaa agatttgatt aatcaaacta gcaatccaac gcttgataaa gcacaagttg
      121 aacaattgac acaagctgtt aaccaagcta aagataacct acatggtgat caaaaacttg
      181 cagacgataa acaacatgca gttactgatt taaatcaatt aaatggtttg aacaatccgc
      241 aacgtcaagc gcttgaaagt caaataaaca atgcagcaac tcgtgg
//
LOCUS       DAKPJH010000318          280 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.323, whole genome shotgun sequence.
ACCESSION   DAKPJH010000318 DAKPJH010000000
VERSION     DAKPJH010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.323"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..226
                     /locus_tag="OY092_002865"
     CDS             <1..226
                     /locus_tag="OY092_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BlaZ family class A beta-lactamase"
                     /protein_id="HCX1077715.1"
                     /translation="GDTLIKDGVPKDYKVADKSGQAITYASRNDVAFIYPKNQSEPII
                     LVIFTNKDNKSDKPNDKLISETAKNVINKF"
BASE COUNT          115 a           39 c           38 g           88 t
ORIGIN      
        1 cggagacact ttaattaaag atggtgttcc aaaagactat aaggttgctg ataaaagtgg
       61 tcaagcaata acatatgctt ctagaaatga tgtagctttt atttatccta agaaccaatc
      121 tgaacctatt attttagtca tttttacgaa taaagacaat aaaagtgata aacctaatga
      181 taaattgata agtgaaaccg ccaagaatgt aataaacaaa ttttaatagt ctaaatgtac
      241 tacaaaaact gatataattc tatctttcat aaaacttcat
//
LOCUS       DAKPJH010000319          279 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.324, whole genome shotgun sequence.
ACCESSION   DAKPJH010000319 DAKPJH010000000
VERSION     DAKPJH010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.324"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>279
                     /locus_tag="OY092_002866"
     CDS             <1..>279
                     /locus_tag="OY092_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HCX1077716.1"
                     /translation="GVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLF
                     AHLKNFSKSPPSGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDP"
BASE COUNT           83 a           43 c           66 g           87 t
ORIGIN      
        1 aggtgtcgat tttccatttg tatatcaaga agttagaacg ccgatgggtg gcagacttac
       61 aagaatgcca tttatgtctg gtggttatgg taattatgta aaaattacta gtggagttat
      121 cgatatgcta tttgcgcatt tgaaaaactt tagcaaatca ccacctagtg gcacgatggt
      181 aaagcccggt gatgttgttg gtttaactgg taataccgga tttagtacag gaccacattt
      241 acattttgaa atgaggagaa atggacgaca ttttgaccc
//
LOCUS       DAKPJH010000320          279 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.325, whole genome shotgun sequence.
ACCESSION   DAKPJH010000320 DAKPJH010000000
VERSION     DAKPJH010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.325"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            1..279
                     /locus_tag="OY092_002867"
                     /pseudo
     CDS             1..279
                     /locus_tag="OY092_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="E domain-containing protein"
BASE COUNT          123 a           52 c           59 g           45 t
ORIGIN      
        1 ggtcaaccaa cagaagagat cacaaaacaa ccagtagata agattgtaga gttcggtggc
       61 gagaaaatac cgcaaggtca taaagatatc ttcgatccaa acttaccaac agatcaaacg
      121 gaaaaagtac caggtaaacc aggaattaag aatccagaca caggaaaagt gatcgaagag
      181 ccagtggatg atgtgattaa acacggacca aaaacgggta caccagaaac aaaaaacagt
      241 agagataccg tttgaaacaa aacgtgagtt taatccaaa
//
LOCUS       DAKPJH010000321          277 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.327, whole genome shotgun sequence.
ACCESSION   DAKPJH010000321 DAKPJH010000000
VERSION     DAKPJH010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.327"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            31..>277
                     /locus_tag="OY092_002868"
     CDS             31..>277
                     /locus_tag="OY092_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001558444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077717.1"
                     /translation="MNRIEKHAKNTFIILMLIMLFWIFMSFIFQKLLFPPSKNNLTTY
                     EALKYYTHLKGYYGLDHISKGIAYIACVLIPLNFFFRF"
BASE COUNT          100 a           34 c           39 g          104 t
ORIGIN      
        1 gaaatgcaag taagtgaggt agttaaaaaa atgaatcgaa ttgaaaaaca tgctaaaaac
       61 acttttatta ttctgatgct cattatgtta ttttggattt ttatgagttt tattttccag
      121 aaattattat ttccaccttc gaaaaataat ttaactacat atgaagcatt gaaatattat
      181 acacatttaa agggatatta cggtttggat catatatcaa aaggaatagc atacattgcc
      241 tgtgtgttaa ttccactcaa tttctttttt agattca
//
LOCUS       DAKPJH010000322          261 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.329, whole genome shotgun sequence.
ACCESSION   DAKPJH010000322 DAKPJH010000000
VERSION     DAKPJH010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.329"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>261
                     /locus_tag="OY092_002869"
     CDS             <1..>261
                     /locus_tag="OY092_002869"
                     /inference="COORDINATES: protein motif:HMM:NF037006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077718.1"
                     /translation="KKVSGKGHEVGNTVTVTFPDGKTATSKVDEKGNWTVDVPEGTEL
                     KVGNEITATETDMSGNKSESGKGKVTDTTAPEAPSVNDTEVGS"
BASE COUNT          117 a           37 c           65 g           42 t
ORIGIN      
        1 aaaaaagtgt caggaaaagg acacgaagta ggaaatactg taactgttac attcccagat
       61 ggaaaaacag caacaagtaa agtagatgaa aaaggcaact ggacagtaga tgttccagag
      121 ggaacagagt taaaagtagg taatgaaatt acagcgactg aaacagatat gtcaggtaac
      181 aaatcagagt cagggaaagg aaaagtaaca gatacaactg caccagaggc accaagtgta
      241 aatgacacag aagtaggaag t
//
LOCUS       DAKPJH010000323          261 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.330, whole genome shotgun sequence.
ACCESSION   DAKPJH010000323 DAKPJH010000000
VERSION     DAKPJH010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.330"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT           92 a           34 c           32 g          103 t
ORIGIN      
        1 attgacgaac attttaaatt aatgaagcat acagagtatt acgatgaatg taaaaacgtt
       61 gcaacccata tgactaatgg ttttaacatt agtaaatttt agttttacat attctttaat
      121 atagatttag tttcctttaa aatataaatc attaaattat ctaatctatt catattattt
      181 attcaagtgg acctgaaaag aaaaataacg gtggctcggc ttcatattca cttttgtcca
      241 agtgttcttt ttcaattatt t
//
LOCUS       DAKPJH010000324          245 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.331, whole genome shotgun sequence.
ACCESSION   DAKPJH010000324 DAKPJH010000000
VERSION     DAKPJH010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.331"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>245)
                     /locus_tag="OY092_002870"
     CDS             complement(<1..>245)
                     /locus_tag="OY092_002870"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="catalyzes the formation of D-glyceraldehyde
                     3-phosphate and acetaldehyde from
                     2-deoxy-D-ribose-5-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-deoxyribose-5-phosphate aldolase"
                     /protein_id="HCX1077719.1"
                     /translation="HTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGAT
                     AEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGAT"
BASE COUNT           60 a           68 c           33 g           84 t
ORIGIN      
        1 gtcgcacctg cttcaaccat tttattgaaa tcttctaaat tacgtacgcc acctgatgct
       61 tttacttcta catcagcacc tactgtatct ttcattaatt taacgtcttc tgcagtcgca
      121 ccgccacctg caaaacctgt tgaagtttta acgaagtccg caccagccgc ttttgttaat
      181 tcactcgctt ttacaatttc gtcatggtcc aacaataccg tctcaataat cacttttact
      241 gtgtg
//
LOCUS       DAKPJH010000325          242 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.332, whole genome shotgun sequence.
ACCESSION   DAKPJH010000325 DAKPJH010000000
VERSION     DAKPJH010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.332"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..>242
                     /locus_tag="OY092_002871"
     CDS             <1..>242
                     /locus_tag="OY092_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000825543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cystatin-like fold lipoprotein"
                     /protein_id="HCX1077720.1"
                     /translation="SQINKVMKIQQETHKEMVKKSNEVNPEFNKDKVNTYVFDDGKLI
                     IISYKLFKDKDQMFYATYEFKNDKIYYKRDINPKTY"
BASE COUNT          113 a           23 c           34 g           72 t
ORIGIN      
        1 aaagtcaaat taataaagta atgaaaattc aacaagaaac tcataaagag atggttaaaa
       61 agagtaatga agttaatcct gaatttaata aggataaagt aaatacttat gtatttgatg
      121 atggcaaatt aattatcatc agctataagt tatttaaaga taaagatcaa atgttttacg
      181 cgacttacga gtttaaaaac gacaaaattt attataagag agatattaat cctaaaacat
      241 ac
//
LOCUS       DAKPJH010000326          240 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.333, whole genome shotgun sequence.
ACCESSION   DAKPJH010000326 DAKPJH010000000
VERSION     DAKPJH010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.333"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..237
                     /locus_tag="OY092_002872"
     CDS             <1..237
                     /locus_tag="OY092_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016170801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077721.1"
                     /translation="QHKYKVGELYPAEGYNNPRVELLTNQIKNKYDKVYIVPLDKLTK
                     QELLELCESLQKKASSSMVKSEIIDLLNGEDNDD"
BASE COUNT           98 a           34 c           46 g           62 t
ORIGIN      
        1 caacacaagt acaaagtagg ggagttgtat ccagctgaag ggtataacaa tcctcgtgtt
       61 gaattgttga caaatcaaat caaaaataag tacgacaaag tttatatcgt acctttagat
      121 aagctgacaa aacaagaatt attagaacta tgcgaatcat tacaaaaaaa agcgtctagt
      181 tcaatggtta aaagtgaaat catcgactta ttgaatggtg aagacaatga cgattgatga
//
LOCUS       DAKPJH010000327          237 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.334, whole genome shotgun sequence.
ACCESSION   DAKPJH010000327 DAKPJH010000000
VERSION     DAKPJH010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.334"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>237)
                     /locus_tag="OY092_002873"
     CDS             complement(<1..>237)
                     /locus_tag="OY092_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077722.1"
                     /translation="KGRGNGPNGFRNEMIEFPNGKRVITPNTDTTAYLPKGSKVYNGA
                     QTYSMLNGTLPRFSLGTMWKDIKSGASSAFNWTKD"
BASE COUNT           63 a           47 c           40 g           87 t
ORIGIN      
        1 atcttttgtc caattaaatg ccgatgatgc accggattta atatctttcc acatagtacc
       61 taaactaaat cttggaagcg ttccgtttaa cattgaataa gtttgtgccc cgttgtatac
      121 ttttgagcct ttaggtaaat aagcggtagt atctgtattt ggtgtgatta cacgtttacc
      181 attagggaat tcaatcattt catttctaaa accatttgga ccatttccgc gtccctt
//
LOCUS       DAKPJH010000328          237 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.335, whole genome shotgun sequence.
ACCESSION   DAKPJH010000328 DAKPJH010000000
VERSION     DAKPJH010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.335"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>237)
                     /locus_tag="OY092_002874"
     CDS             complement(<1..>237)
                     /locus_tag="OY092_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077723.1"
                     /translation="KGRGNGPNGFRNEMIEFPNGKRVITPNTDTTAYLPKGSKVYNGA
                     QTYSMLNGTLPRFSLGTMWKDIKSGASSAFNWTKD"
BASE COUNT           64 a           46 c           41 g           86 t
ORIGIN      
        1 atcttttgtc cagttaaatg ccgatgatgc accagattta atatctttcc acatagtacc
       61 taaactaaat cttggaagcg ttccgtttaa cattgaataa gtttgtgcac cgttgtatac
      121 ttttgagcct ttaggtaaat aagcggtagt atctgtatta ggtgtgatta cacgtttacc
      181 gttagggaat tcaatcattt catttctaaa accatttgga ccatttccgc gtccctt
//
LOCUS       DAKPJH010000329          228 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.336, whole genome shotgun sequence.
ACCESSION   DAKPJH010000329 DAKPJH010000000
VERSION     DAKPJH010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.336"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..>228)
                     /locus_tag="OY092_002875"
     CDS             complement(<1..>228)
                     /locus_tag="OY092_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077724.1"
                     /translation="YTDGDECAYSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWS
                     ELKMGNVSNGKPEYIEEFKTYRSSRVYEGIFY"
BASE COUNT           72 a           44 c           24 g           88 t
ORIGIN      
        1 ataaaaaatg ccctcgtaaa cgcgagagct tctatatgtt ttaaattctt ctatatattc
       61 cggttttcca tttgaaacat ttcccatttt tagttcagac cataataact tttgaatgcg
      121 attagatatc ttatttctta tgattctcgc attatattca tcattgtact taacaaaaac
      181 atctatttgg acaatataac tatatgcaca ctcatctccg tcagtata
//
LOCUS       DAKPJH010000330          218 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.337, whole genome shotgun sequence.
ACCESSION   DAKPJH010000330 DAKPJH010000000
VERSION     DAKPJH010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.337"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT           89 a           28 c           43 g           58 t
ORIGIN      
        1 gattatcagc cgattattga cgaatacgct tttgataaaa aggtgaacgc gtctatagaa
       61 aagcgagaaa ggcaagaatc aacaaaagta aagtttagaa aaggaggaat tgctattcaa
      121 tgatagacac tattaaagtg aacaacaaaa caattccttg gttgtatgtc gaaagagggt
      181 ttgaaatacc ctcttttaat tatgttttaa aaacagaa
//
LOCUS       DAKPJH010000331          214 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.338, whole genome shotgun sequence.
ACCESSION   DAKPJH010000331 DAKPJH010000000
VERSION     DAKPJH010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.338"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT           83 a           31 c           22 g           78 t
ORIGIN      
        1 tatgacaatg aatcacttta gatacacatt gaatattgaa acatttaatt gcgctaaatc
       61 gtttcataaa ataaattacc ttatactgac gattaaatta aggtaaatta taaaaaatgc
      121 tgatattttt gactaaacca aatgctaacc cagaaataca atcactgtgt ctaatgaata
      181 atttgtttta taaacacttt tttgtttact tctc
//
LOCUS       DAKPJH010000332          213 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.339, whole genome shotgun sequence.
ACCESSION   DAKPJH010000332 DAKPJH010000000
VERSION     DAKPJH010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.339"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
BASE COUNT           75 a           36 c           54 g           48 t
ORIGIN      
        1 acttgacggt gaaagtccgt tacaggcttg gtagtaggaa ctgttagcga aagacaaggg
       61 tgtccattgt gaagtggaat ctgaaggaag tcggacgcaa acactcgcat tgacgaacag
      121 aaacatcata ataaggccat ataaaacgga tgagtctgct aaacaagatg aagtccaata
      181 ctacccgaat tttatatggt aaatgatgcg atg
//
LOCUS       DAKPJH010000333          208 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.denovo.341, whole genome shotgun sequence.
ACCESSION   DAKPJH010000333 DAKPJH010000000
VERSION     DAKPJH010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.denovo.341"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(89..196)
                     /locus_tag="OY092_002876"
     CDS             complement(89..196)
                     /locus_tag="OY092_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCX1077725.1"
                     /translation="MIFILWCVNLYIEKGQHAQTCYPNEPVKKTVAILD"
BASE COUNT           71 a           34 c           30 g           73 t
ORIGIN      
        1 gtaatcaagc ttattgaatt aagcaataaa aaataaccat cgctaacttt ggctggtttc
       61 gatggttaaa tggttattaa tttaatcttt aatctaaaat agccaccgtc tttttaacgg
      121 gctcattagg gtaacatgtt tgcgcatgtt gccctttttc tatatataaa ttaacacacc
      181 ataatataaa tatcaaatag acggctta
//
LOCUS       DAKPJH010000334         5438 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.guided.142, whole genome shotgun sequence.
ACCESSION   DAKPJH010000334 DAKPJH010000000
VERSION     DAKPJH010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.guided.142"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..618
                     /locus_tag="OY092_002877"
     CDS             <1..618
                     /locus_tag="OY092_002877"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCX1077726.1"
                     /translation="DPEFNEQYKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWV
                     DKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLS
                     CQLYQRSADIFLGVPYNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQT
                     QLARESFNPPTLKINSDKSIFDINYEDLEIVDYESHPAIKAPIAV"
     gene            818..1297
                     /locus_tag="OY092_002878"
     CDS             818..1297
                     /locus_tag="OY092_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HCX1077727.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVTSSVEGKLDEKNTIPHTFLHLIRKK"
     gene            1312..2151
                     /gene="fakB2"
                     /locus_tag="OY092_002879"
     CDS             1312..2151
                     /gene="fakB2"
                     /locus_tag="OY092_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB2"
                     /protein_id="HCX1077728.1"
                     /translation="MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGVSYVDQVDI
                     TSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQA
                     SQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIG
                     QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEF
                     IGDHEIKSVGVTHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV
                     LKK"
     gene            2237..2770
                     /gene="msrA"
                     /locus_tag="OY092_002880"
     CDS             2237..2770
                     /gene="msrA"
                     /locus_tag="OY092_002880"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCX1077729.1"
                     /translation="MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYE
                     QVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYH
                     DEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQR
                     GSGRKAFIESHWGNQNA"
     gene            2763..3191
                     /gene="msrB"
                     /locus_tag="OY092_002881"
     CDS             2763..3191
                     /gene="msrB"
                     /locus_tag="OY092_002881"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HCX1077730.1"
                     /translation="MLKKDKSELTDIEYIVTQENGTEPPFMNEYWNHFAKGIYVDKIS
                     GKPLFTSEEKFHSECGWPSFSKALDDDEIIELVDKSFGMVRTEVRSEESNSHLGHVFN
                     DGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLISHFDK"
     gene            3203..3703
                     /locus_tag="OY092_002882"
     CDS             3203..3703
                     /locus_tag="OY092_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCX1077731.1"
                     /translation="MFKKLFGKGKEVQKDIAIYAPLTGEYVKIEDIPDPVFAQKMMGE
                     GFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVL
                     VSSGDEVNVGDPLVRFNLEFINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKV
                     IDVTMN"
     gene            3703..3924
                     /locus_tag="OY092_002883"
     CDS             3703..3924
                     /locus_tag="OY092_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HCX1077732.1"
                     /translation="MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILS
                     DYIETHGDFTLPMSVFDDLYEEYTEWLKF"
     gene            4113..>5438
                     /locus_tag="OY092_002884"
     CDS             4113..>5438
                     /locus_tag="OY092_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HCX1077733.1"
                     /translation="MDDKQHTSSSDDERAEIATSNQDQQTNSSKRVHLKRWQFISILI
                     GTILITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYYKKQDSDKLSKA
                     AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPA
                     ERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREK
                     IHVKSVEYKKKDKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLD
                     EAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGSASASEVF
                     TGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPD
                     VTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQF"
BASE COUNT         2032 a          777 c          989 g         1640 t
ORIGIN      
        1 gatcctgaat ttaacgaaca atataaagaa caaatgaaac aatttaagca acgtattctt
       61 gaagatgata catttgcgaa gcaattcggt gatttaggaa atgtttatgg taaacaatgg
      121 cgagattggg ttgataaaga tggtaatcat tttgatcaac ttaaaacagt aattgaacaa
      181 attaagcata atccagattc aagacgacac atcgtatctg catggaatcc aacagaaatt
      241 gatacaatgg cacttccgcc ttgtcataca atgttccagt tttatgtcca agatggtaag
      301 ttaagttgcc agttatacca acgtagcgca gatatctttt taggtgtgcc atataatatc
      361 gcaagctacg ctttattgac acaccttatt gccaaagaat gtggacttga agtaggtgaa
      421 tttgtgcata catttggaga tgcacatatt tattcaaatc atattgatgc aattcaaact
      481 caattagcgc gtgaaagttt caatcctcca acattaaaaa ttaacagtga caagtctatt
      541 ttcgacataa attatgaaga tttggaaatt gttgactatg aatcgcatcc agcaataaaa
      601 gctccaatag cagtgtagtc attgcatagt tagctaacca tatagacatc aaaatgacat
      661 catagtattt tcaagtgcaa aaaagtactt ttttgtgtta aacgttttca taaattatgc
      721 aaaatcatta tttctatcac actttatgat aaaaattgtg ttaaattaaa gataacttag
      781 taataaaaaa tgaaatgata gaagaaggag gataattatg actttatcca ttctagttgc
      841 acatgacttg caacgagtaa ttggttttga aaatcaatta ccttggcacc taccaaatga
      901 tttgaagcat gttaaaaaac tatcaacagg tcatacttta gtaatgggtc gtaagacatt
      961 tgaatcgatt ggtaaaccac taccgaatcg tcgaaatgtt gtacttactt cagatacaag
     1021 tttcaacgta gagggcgttg atgtgattca ttctattgaa gatatttacc aactaccggg
     1081 acatgttttc atatttggag ggcaaacatt atttgaagaa atgattgata aagtggacga
     1141 catgtatatt actgttattg aaggtaaatt ccgtggtgat acgttcttcc caccttatac
     1201 atttgaagac tgggaagtta cctcttcagt tgaaggtaaa ctagatgaga aaaatacaat
     1261 tccacatacc tttctacatt taattcgtaa aaaataaggg ggaaaacgac catgacaaaa
     1321 cagattatag taacagactc aacatccgat ttatctaaag aatatttaga agcaaacaac
     1381 attcatgtaa ttcctttaag tttaactatt gaaggagttt catacgttga ccaagtagat
     1441 attacatcag aagaatttat taatcatatt gaaaatgatg aagatgtaaa gacaagtcag
     1501 ccagccatag gtgaatttat atctgcttat gaagaactag gaaaagatgg ctccgaaatc
     1561 ataagtattc atctttcttc aggattaagt ggtacatata acactgctta ccaagcaagt
     1621 caaatggtag atgctaatgt aactgttatt gattcaaaat ctatttcttt tggtttaggg
     1681 tatcaaatac aacacctagt agagcttgta aaagaaggtg tctcaacttc tgaaatagtt
     1741 aaaaagttaa atcatttaag agaaaacatt aaattatttg tagttatagg gcaattgaat
     1801 caattaatta aaggtggcag aattagtaaa acaaaaggtt tgattggtaa tcttatgaaa
     1861 atcaaaccaa ttggtacact agatgatggt cgcttagagc ttgtgcacaa tgcgagaact
     1921 caaaattcta gtatccaata cttgaaaaag gaaattgctg aatttatagg agatcatgaa
     1981 atcaaatccg ttggtgtcac acatgctaac gttattgaat atgttgataa attgaagaaa
     2041 gtttttaatg aagcttttca tgtgaataat tacgatataa atgtaactac accagttatt
     2101 tctgcacata ctggtcaagg tgcgattggc ctcgtagtcc ttaagaagta aatttaatct
     2161 tttcagtgtt aattacttcc atttcaatcc tttatagact aaatttataa ttagatagat
     2221 agaggaggta attcatatga caaaagaata tgcaacatta gcaggaggat gtttctggtg
     2281 catggttaaa ccatttacat catatccagg catcaagtca gtcgtatctg gttatagtgg
     2341 cggtcatgtt gacaacccaa cttatgaaca ggtatgtacg aatcaaaccg gccatgtcga
     2401 agcagtacaa attacgtttg atccagaggt tacttccttt gaaaatatat tagacatata
     2461 tttcaaaaca tttgacccaa ccgatgatca agggcaattt ttcgatagag gcgaaagcta
     2521 tcaaccagtc attttctatc atgatgagca tcagaaaaag gctgctgagt ttaaaaagca
     2581 acaattaaat gaacaaggta ttttcaagaa accagtgatt acacctatta aaccatataa
     2641 aaatttctat ccagctgaag actaccatca agattattac aaaaagaacc cggtacatta
     2701 ttaccaatat caacgtggtt caggtagaaa agcgtttata gaatcacatt gggggaatca
     2761 aaatgcttaa aaaagataaa agcgaactaa cagatataga atatattgtt acacaagaaa
     2821 atggtactga accaccattt atgaatgaat attggaatca ttttgctaaa gggatttacg
     2881 tagataagat ttctggtaaa cctttattta catctgaaga aaagtttcat tctgagtgcg
     2941 gatggcctag cttttccaaa gcgcttgatg acgatgaaat tatagaatta gtcgacaaat
     3001 catttggtat ggtaagaact gaagtccgtt cagaagaatc aaatagtcat ttaggacacg
     3061 tctttaatga tggacctaaa gaaagtggcg gcttaagata ctgtatcaat tccgctgcaa
     3121 ttcaatttat tccatatgaa aaattagaag aattgggtta tggcgattta atatcacatt
     3181 ttgataagta ggagtggaaa gtatgtttaa aaaattattc ggaaaaggca aagaagttca
     3241 gaaagatatc gcaatttatg caccattaac tggagaatac gtgaaaattg aagatattcc
     3301 agatcctgta ttcgcacaaa aaatgatggg cgaaggtttt ggtattaatc caactgaagg
     3361 agaagttgtg tctccaattg caggacgtgt tgacaatgtc tttccaacta agcatgcgat
     3421 tgggttaaaa gcagataacg gattagaatt attagttcat atcggtttag acacagttca
     3481 attagacggt gaaggatttg aagtgttagt gtctagtggt gacgaagtta acgtcggaga
     3541 tccattagta agattcaacc ttgaatttat taataataac gctaaatctg ttatttcacc
     3601 aattataatt acaaacactg atcaagcagc ttcaattaat atttatgatg aaaatgctgt
     3661 gattaaaggt gaaacaaaag tgattgatgt gacaatgaac taatgaaaaa ctattcgttt
     3721 tatcaatttg tcatgacagt tcgtggtcga cacgacgata aaggtcgtct agcagaagag
     3781 atatttgacg atcttgcttt cccaaaacac gatgatgatt ttaacatact gtctgattat
     3841 attgagacac atggtgattt cacattgcca atgtctgtat ttgatgattt atatgaagaa
     3901 tatacggaat ggctaaaatt ttaacataat atttaataat agttagaacc agggtgatgc
     3961 aatttgttat cctggtttta atttaaaata aactaagttg tgactaaaaa ttaatcaatt
     4021 atagtgaaat atggtgcgct atcttgcata aattgatatg attaactaca cagaatttaa
     4081 aagtacataa tacataataa ggaagtgata caatggatga taagcaacac acatcttcat
     4141 ccgatgatga acgcgctgaa attgcaacaa gcaatcaaga ccaacaaact aattcatcga
     4201 aacgcgttca cttaaaacgt tggcaattca tatcaatttt aattggtaca atcctaataa
     4261 cagctgtcat cacagttgtt gcatatattt ttataaatca aaaaataagt ggtttaaaca
     4321 aaactgatca agcaaactta aataaaattg aaaatgtgta taaaatctta aatagtgatt
     4381 attacaaaaa acaggactct gacaagttaa gtaaagctgc aattgatggc atggtcaaag
     4441 aattaaaaga tccttattct gaatatttaa caaaagaaca aacgaaatcc tttaatgaag
     4501 gtgtttcagg tgattttgta ggtattggtg cagaaatgca aaagaaaaat gatcaaatta
     4561 tggttactag tcctatgaag ggatctccag cagaacgtgc tggcattcgt cctaaagatg
     4621 tcattactaa agtaaatgga aaatcaatta aaggtaaagc attagatgaa gttgtcaaag
     4681 atgttcgtgg taaagaaaac actgaagtaa ctttaactgt tcaacgaggc agtgaagaaa
     4741 aagacgttaa gattaaacgt gaaaaaattc atgttaaaag tgttgagtat aagaaaaaag
     4801 ataaggttgg agttattact attaataaat tccagaatga tacatcaggt gaattgaaag
     4861 atgcagttct taaagctcac aaagatggtt tgaaaaagat tgttttagat ttaagaaata
     4921 atcctggtgg actactagat gaagctgtta aaatggcaaa tatttttatc gataaaggaa
     4981 aaactgttgt taaactagaa aaaggtaaag atactgaagc aattcaaact tctaatgact
     5041 cgttaaaaga agcgaaagac atggatatat ccatcttagt gaatgaaggt tcagctagcg
     5101 cttctgaagt atttactggt gcgctaaagg actataataa agctaaagtt tatgggtcaa
     5161 aaacattcgg taaaggtgtc gtacaaacta caagagagtt taaggacggt tcattgttaa
     5221 aatatactga aatgaaatgg ttaacgccag atggtcatta tattcacggt aaaggcatta
     5281 aaccagacgt tactattgac acacctaaat atcaatcttt aaatgtcatt cctaatacga
     5341 aaacatttaa agttggagac gatgataaaa atattaaaac tattaaaatt ggtttatcag
     5401 ctttaggtta taaagttgat aatgaatcaa cgcaattt
//
LOCUS       DAKPJH010000335         5334 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.guided.143, whole genome shotgun sequence.
ACCESSION   DAKPJH010000335 DAKPJH010000000
VERSION     DAKPJH010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5334
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.guided.143"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            452..1195
                     /locus_tag="OY092_002885"
     CDS             452..1195
                     /locus_tag="OY092_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HCX1077734.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
     gene            1292..1720
                     /locus_tag="OY092_002886"
     CDS             1292..1720
                     /locus_tag="OY092_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HCX1077735.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(1766..3775)
                     /gene="mecA"
                     /locus_tag="OY092_002887"
     CDS             complement(1766..3775)
                     /gene="mecA"
                     /locus_tag="OY092_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase MecA"
                     /protein_id="HCX1077736.1"
                     /translation="MMKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFK
                     QVYKDSSYISKSDNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKI
                     KTNYGNIDRNVQFNFVKEDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNN
                     VELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTV
                     KKMDEYLSDFAKKFHLTTNETESRNYPLEKATSHLLGYVGPINSEELKQKEYKGYKDD
                     AVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQ
                     KSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPL
                     LNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVV
                     NGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKN
                     LDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISK
                     ENINLLTDGMQQVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKD
                     NPNMMMAINVKDVQDKGMASYNAKISGKVYDELYENGNKKYDIDE"
     gene            3872..4858
                     /locus_tag="OY092_002888"
     CDS             3872..4858
                     /locus_tag="OY092_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer MecR1"
                     /protein_id="HCX1077737.1"
                     /translation="MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVL
                     VSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFET
                     SNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKK
                     HITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQ
                     LYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKS
                     QHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISSFT"
     gene            4830..5090
                     /locus_tag="OY092_002889"
     CDS             4830..5090
                     /locus_tag="OY092_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3387 domain-containing protein"
                     /protein_id="HCX1077738.1"
                     /translation="MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
                     SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ"
     gene            complement(5081..>5334)
                     /locus_tag="OY092_002890"
     CDS             complement(5081..>5334)
                     /locus_tag="OY092_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011274780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HCX1077739.1"
                     /translation="VFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAE
                     NNQKIYKKDNFYIISIEIVFFHLSKNFMSRTHYDLFFYC"
BASE COUNT         1808 a          787 c          861 g         1878 t
ORIGIN      
        1 ttgttaaaag cagttctaag taaaattgca gataagaggt acgttaaaag caattccatg
       61 caaaattgct gataaggggt aagttaaaag cagttctcag taaaattgca gataagaggt
      121 acgttaaaag cagttctagg caaaattgca gataagaggt gcgttaaaag cagttctcag
      181 taaaattgct gataaggggt aagttaaaag caatcctaag taaaattgca gataaggggt
      241 acagaaaaac tagacttgat tacaaaatgg agcttgggac ataaatgatt ttttaaaaat
      301 gagatgagac gtagattaac tccataatca atacgaatct atcgacttct ttatttatga
      361 tattcatctc tttttaatgg aaataaaagt gcgattaatg tgataataca gttacgttaa
      421 ttaaaaaaat aaaaatgcaa ggagaggtaa tatgctaact gtatatggac atagaggatt
      481 acctagtaaa gctccggaaa atacaattgc atcatttaaa gctgcttcag aagtagaagg
      541 tataaactgg ttggagttag atgttgcaat tacaaaagat gaacaactga ttatcattca
      601 tgatgattat ttagaacgga ctacaaatat gtccggggaa ataactgaat tgaattatga
      661 tgaaattaaa gatgcttctg caggatcttg gtttggtgaa aaattcaaag atgaacattt
      721 gccaactttc gatgatgtag taaaaatagc aaatgaatat aatatgaatt taaatgtaga
      781 attaaaaggt attactggac cgaatggact agcactttct aaaagtatgg ttaagcaagt
      841 ggaagaacaa ttaacaaact taaatcagaa tcaagaagtg ctcatttcaa gctttaatgt
      901 tgtgcttgtt aaacttgcag aagaaatcat gccacaatat aacagagcag ttatattcca
      961 tacaacttcg tttcgtgaag actggagaac acttttagat tactgtaatg ctaaaatagt
     1021 aaacactgaa gatgccaaac ttactaaagc aaaagtaaaa atggtaaaag aagcgggtta
     1081 tgaattgaac gtatggactg taaacaaacc agcacgtgca aaccaacttg ctaattgggg
     1141 agttgatggt atctttacag acaatgcaga taaaatggtg catttgtctc aatagaaagt
     1201 tagaggtgag tcttacgttt cagtgacggt agacttacct ttaacatgtt acatactaaa
     1261 aaattaattt gaataagaaa gagagacata tatgaaatac gatgatttta tagtaggaga
     1321 aacattcaaa acaaaaagcc ttcatattac agaagaagaa attatccaat ttgcaacaac
     1381 ttttgatcct caatatatgc atatagataa agaaaaagca gaacaaagta gatttaaagg
     1441 tatcattgca tctggcatgc atacactttc aatatcattt aaattatggg tagaagaagg
     1501 taaatacgga gaagaagttg tagcaggaac acaaatgaat aacgttaaat ttattaaacc
     1561 tgtataccca ggtaatacat tgtacgttat cgctgaaatt acaaataaga aatccataaa
     1621 aaaagaaaat ggactcgtta cagtgtcact ttcaacatac aatgaaaatg aagaaattgt
     1681 atttaaggga gaagtaacag cacttattaa taattcataa taaaacagtg aagcaaccat
     1741 cgttacggat tgcttcactg ttttgttatt catctatatc gtatttttta ttaccgttct
     1801 catatagctc atcatacact ttacctgaga ttttggcatt gtagctagcc attcctttat
     1861 cttgtacatc tttaacatta atagccatca tcatgtttgg attatcttta tcatatgata
     1921 taaaccaccc aatttgtctg ccagtttctc cttgtttcat tttgagttct gcagtaccgg
     1981 atttgccaat taagtttgca taagatctat aaatatcttc tttatgtgtt ttatttacga
     2041 cttgttgcat accatcagtt aatagattga tattttcttt ggaaataata tttttcttcc
     2101 aaactttgtt tttcgtgtct tttaataagt gaggtgcgtt aatattgcca ttattttcta
     2161 atgcgctata gattgaaagg atctgtactg ggttaatcag tatttcacct tgtccgtaac
     2221 ctgaatcagc taataatatt tcattatcta aatttttgtt tgaaatttga gcattataaa
     2281 atggataatc acttggtata tcttcaccaa cacctagttt tttcatgcct ttttcaaatt
     2341 tcttactgcc taattcgagt gctactctag caaagaaaat gttatctgat gattctattg
     2401 cttgttttaa gtcgatatta ccatttacca cttcatatct tgtaacgttg taaccacccc
     2461 aagatttatc tttttgccaa cctttaccat cgattttata acttgtttta tcgtctaatg
     2521 ttttgttatt taacccaatc attgctgtta atattttttg agttgaacct ggtgaagttg
     2581 taatctggaa cttgttgagc agaggttctt ttttatcttc ggttaattta ttatattctt
     2641 cgttactcat gccatacata aatggataga cgtcatatga aggtgtgctt acaagtgcta
     2701 ataattcacc tgtttgaggg tggatagcag tacctgagcc ataatcattt ttcatgttgt
     2761 tataaatact cttttgaact ttagcatcaa tagttagttg aatatctttg ccatcttttt
     2821 tctttttctc tattaatgta tgtgcgattg tattgctatt atcgtcaacg attgtgacac
     2881 gatagccatc ttcatgttgg agctttttat cgtaaagttt ttcgagtccc tttttaccaa
     2941 taactgcatc atctttatag cctttatatt ctttttgttt taattcttca gagttaatgg
     3001 gaccaacata acctaataga tgtgaagtcg ctttttctag aggatagtta cgactttctg
     3061 tttcattagt tgtaagatga aatttttttg cgaaatcact taaatattca tccatttttt
     3121 taacggtttt aagtggaacg aaggtatcat cttgtaccca attttgatcc atttgttgtt
     3181 tgatatagtc ttcagaaata cttagttctt tagcgattgc tttataatct tttttagata
     3241 cattctttgg aacgatgcct atctcatatg ctgttcctgt attggccaat tccacattgt
     3301 ttcggtctaa aattttacca cgttctgatt ttaaattttc aatatgtatg ctttggtctt
     3361 tctgcattcc tggaataatg acgctatgat cccaatctaa cttccacata ccatcttctt
     3421 taacaaaatt aaattgaacg ttgcgatcaa tgttaccgta gtttgtttta attttatatt
     3481 gagcatctac tcgtttttta tttttagata ctttttttat tttacgatcc tgaatgttta
     3541 tatctttaac gcctaaacta ttatatattt ttatcggacg ttcagtcatt tctacttcac
     3601 cattatcgct tttagaaata taactgctat ctttataaac ttgtttgaaa tttttatctt
     3661 caattgcatc aatagtatta ttaatttctt tatcttttga agcataaaaa tatataccaa
     3721 acccgacaac tacaactatt aaaataagtg gaacaatttt tatctttttc atcaatatcc
     3781 tccttatata agactacatt tgtagtatat tacaaatgta gtatttatgt caaaataatg
     3841 ttataatttt tgtgatatgg aggtgtagaa ggtgttatca tcttttttaa tgttaagtat
     3901 aatcagttca ttgctcacga tatgtgtaat ttttttagtg agaatgctct atataaaata
     3961 tactcaaaat attatgtcac ataagatttg gttattagtg ctcgtctcca cgttaattcc
     4021 attaatacca ttttacaaaa tatcgaattt tacattttca aaagatatga tgaatcgaaa
     4081 tgtatctgac acgacttctt cggttagtca tatgttagat ggtcaacaat catctgttac
     4141 gaaagactta gcaattaatg ttaatcagtt tgagacctca aatataacgt atatgattct
     4201 tttgatatgg gtatttggta gtttgttgtg cttattttat atgattaagg cattccgaca
     4261 aattgatgtt attaaaagtt cgtcattgga atcgtcatat cttaatgaac gacttaaagt
     4321 atgtcaaagt aagatgcagt tctacaaaaa gcatataaca attagttata gttcaaacat
     4381 tgataatccg atggtatttg gtttagtgaa atcccaaatt gtactaccaa ctgtcgtagt
     4441 cgaaaccatg aatgacaaag aaattgaata tattattcta catgaactat cacatgtgaa
     4501 aagtcatgac ttaatattca accagcttta tgttgttttt aaaatgatat tctggtttaa
     4561 tcctgcacta tatataagta aaacaatgat ggacaatgac tgtgaaaaag tatgtgatag
     4621 aaacgtttta aaaattttga atcgccatga acatatacgt tatggtgaat cgatattaaa
     4681 atgctctatt ttaaaatctc agcacataaa taatgtggca gcacaatatt tactaggttt
     4741 taattcaaat attaaagaac gtgttaagta tattgcactt tatgattcaa tgcctaaacc
     4801 taatcgaaac aagcgtattg ttgcgtatat tgtatgtagt atatcgagct tcacatgaaa
     4861 cagctaaaga agctttgggc gataaagagt taagagccat tgcacatgag ttaactaaaa
     4921 cagttaagga taacatgagt gttgattggt ctaaacgaga cagtgctaaa gctaaaatga
     4981 gagttcaagt tagacgccta ttaaagaaat atggctatcc accagatctt caaaaaatgg
     5041 ctgtggaaca agttgtagag caagcagaat taatggcaag tcagcaataa aaaaataaat
     5101 cataatgagt ccgggacata aagttcttgg ataagtgaaa aaagacaatt tctattgaaa
     5161 taatatagaa attgtctttt ttataaattt tttgattatt ttcagctcgt tgagctacta
     5221 cttttcttat attaagtgcc attaatacaa aaccaagttc tcttttgact ttattgagtc
     5281 ctcggacaga catccgagtg aaacccaaaa tagccttcat aaatccaaaa acag
//
LOCUS       DAKPJH010000336         4140 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.guided.163, whole genome shotgun sequence.
ACCESSION   DAKPJH010000336 DAKPJH010000000
VERSION     DAKPJH010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4140
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.guided.163"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            53..652
                     /locus_tag="OY092_002891"
     CDS             53..652
                     /locus_tag="OY092_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HCX1077740.1"
                     /translation="MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE
                     GTELEHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDI
                     KAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLF
                     DVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK"
     gene            complement(995..1750)
                     /locus_tag="OY092_002892"
     CDS             complement(995..1750)
                     /locus_tag="OY092_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCX1077741.1"
                     /translation="MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCAR
                     FDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLDRV
                     SMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
                     TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPHFKNHSHVFDGDTHCWLIIET
                     LYAQTPYPIMINKWYIPQEISELTLTRIRQSDY"
     gene            1986..2693
                     /gene="deoD"
                     /locus_tag="OY092_002893"
     CDS             1986..2693
                     /gene="deoD"
                     /locus_tag="OY092_002893"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCX1077742.1"
                     /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNT
                     VRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENID
                     LYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSD
                     IFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPE
                     ERERAFTDMIEIALSLV"
     gene            2700..4052
                     /gene="tet(38)"
                     /locus_tag="OY092_002894"
     CDS             2700..4052
                     /gene="tet(38)"
                     /locus_tag="OY092_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HCX1077743.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK
                     "
BASE COUNT         1369 a          627 c          740 g         1404 t
ORIGIN      
        1 cacccgaaat taattattat aaaagtatat tcataaaagg aggaatatac ttatggcatt
       61 taaattacca aatttaccat atgcatatga tgcattggaa ccatatatag atcaaagaac
      121 aatggagttt catcacgaca aacatcacaa tacgtacgtg acgaaattaa acgcaacagt
      181 tgaaggaaca gagttagagc atcaatcact agcggatatg attgctaact tagacaaggt
      241 accggaagcg atgaggatgt cagtccgtaa taatggcggt ggtcatttta accattcatt
      301 attctgggaa atactatcac ctaattctga agaaaaaggt ggcgtaatag acgacattaa
      361 agcgcagtgg ggcactttag atgaatttaa aaatgaattt gcaaataaag caacaacatt
      421 atttggatca ggttggactt ggttagttgt taatgatgga aaattagaaa ttgtgacaac
      481 gccaaaccaa gataatccat taacagaagg caaaacacca atcttactat ttgatgtttg
      541 ggagcatgcc tactatctga aatatcaaaa taaacgtcca gactatatga ctgcattttg
      601 gaatattgtt aactggaaaa aagttgatga attataccaa gcagcaaaat aatataactt
      661 aatataattg aggtggagca tctacaaggt gtttcacctt ttttgtatgt atgaggtaat
      721 caatttgctt tttgtataat gggttggaga atcaaatgta ggtaaaacag tacaatcatt
      781 tacaatgatg aatactttac ttgtgttctc tgtgcttgtg aactcaatgt ttcgagaaga
      841 gcgcacatcg aataacaaaa ttatttagac aacgttcaac aaataaataa acatcatacg
      901 ttttaaagta gaaaaaatca tgtgattacc tgaaagttat tgtcgattaa acaatagcta
      961 aacagtcatc acatgatttt ttattttaat aattttaata atccgattgt cttatacgtg
     1021 tcagtgttaa ttcagatatt tcctgtggaa tataccactt attaatcata attggataag
     1081 gtgtttgtgc gtacaatgtt tcaataatca gccaacaatg tgtatcacca tcaaacacgt
     1141 gactatgatt tttgaagtgg ggcgctttgg taatagacat ttttaaatct gattgatatg
     1201 cattgctata aatcgtctgc tcaacgaacg tcttcatgtc gtcttcgttt tgtgtattca
     1261 ctttaaatgt gtcaatgaca tttaacggta taaaggtaaa acaaaatgca tcagcttgct
     1321 tagaatgatt gtcctttttt tgataatagc gttccattgc aatgacggca gaaggatggt
     1381 ttgcaaacaa atgatttgta tattcacttt ctaaatcaac acgataatta attgatgaca
     1441 tagatacacg atctagcaat atttgatcaa gtggatgctt aaattgatcc atacttgaag
     1501 cgtgttgggc atttgtttgt ggaataacga agtgtccctt ccctcttgta ctctctacga
     1561 tgccatcttc ggccaacaat tttatagctt ggcgcaaagt catacgactg acatcaaagc
     1621 gcgcacaaag ttccttttca gtaggtaatg catggccact cggatatttt cctatttgaa
     1681 tttctttata taacgtatta taaatcgtta aaaattttgg ttgtgtttgc gtcacgtaga
     1741 caacctccat aaagttactt aatcactctc atcatacaat aatttttact cgaattggaa
     1801 aaattataaa aattaaacat agataggctt tgaaaattag ttttatacaa ggttagaagc
     1861 tataactgta aaatgttctt aatattgtca aaatgtaatg cttgaaagcg cttttaaaaa
     1921 atattattat atacatggtt agacaaatag acaaatcact atacaaatat tgggaggaat
     1981 attttatgaa atcaacacca cacattaagc caatgaatga cgtcgaaatt gcagaaacgg
     2041 tgctattgcc aggagatccg ttaagagcta agttcattgc agaaacatat ttggacgatg
     2101 tggaacagtt caatacagtg cgaaacatgt ttggttttac cggaacatat aaaggtaaaa
     2161 aagtttctgt catgggttca ggtatgggta tgccatctat tggcatttac tcttatgaat
     2221 taattcatac atttggttgt aaaaaattaa ttcgcgttgg ttcttgtggc gcgatgcaag
     2281 aaaacattga tttatatgat gtgattattg cacaaggtgc ctctactgat tcaaattacg
     2341 ttcaacaata tcaattacca ggtcattttg cgccaattgc ttcttatcag ttattagaaa
     2401 aagcagttga aacagcacgt gacaaaggtg tacgtcatca tgtaggtaat gtgttatcaa
     2461 gtgatatttt ctataacgcg gatacaacag cgagtgaacg ttggatgcgt atgggtattt
     2521 taggtgtaga aatggaatca gctgcattat acatgaatgc aatttacgct ggtgtcgaag
     2581 cattaggtgt gttcacagtg agcgatcatt taattcatga aacgtcaaca acacctgagg
     2641 aaagggaacg tgcatttaca gatatgattg aaattgcact gtcattggtg tagatgatta
     2701 tgaatgttga atattctaaa ataaagaaag cagtacctat tttattattc ttatttgtat
     2761 tcagtttggt tatagacaac tcattcaaat tgatttctgt agccattgct gatgacttaa
     2821 acatttctgt aactacagta agttggcaag cgacattagc cggtttagta attggtattg
     2881 gcgctgtagt atacgcttca ttatctgatg ccattagtat acgcacacta tttatttatg
     2941 gcgtgatatt aatcattatc ggatcaatta ttggttacat tttccaacat caattcgcat
     3001 tacttttagt tggacgtatt attcaaactg caggtttagc tgctgcagag acattatatg
     3061 tgatatatgt tgcaaagtat ctttctaaag aggaccagaa gacttacctt ggcttaagta
     3121 cgagcagtta ttccttgtca ttagttatcg gtacattatc aggtggattt atttctacgt
     3181 atttacactg gacaaatatg tttttaattg cattaatcgt agtatttacg ttgccattcc
     3241 tatttaaatt attaccaaaa gaaaataata caaataaagc tcatttagat tttgttggct
     3301 taattctagt ggcaactatt gctacaacag tcatgctgtt tattacgaac tttaattggt
     3361 tatatatgat tggtgcttta attgcgatta tcgtttttgc gctatatatt aaaaatgcgc
     3421 aacgtccatt agtaaacaaa tcatttttcc aaaataaacg ttatgcttca tttttattta
     3481 tagtattcgt aatgtatgct atccaattgg gttatatttt tacgttccca ttcataatgg
     3541 aacaaattta tcatcttcaa ctagacacaa catcactgtt attagtaccg ggttatattg
     3601 tagcagtcat cgttggtgca ctaagtggta aaatcggcga atatcttaat tcaaaacaag
     3661 cgattatcac agcaattatt ttaatcgcac tgagcttaat tttacctgca tttgcagtag
     3721 gtaatcacat ttcaatcttc gtcatttcta tgatattctt tgcaggtagc tttgctttaa
     3781 tgtatgcacc tttacttaac gaagccatta aaacaataga tcttaatatg acaggtgtgg
     3841 ctattggttt ttataattta attattaatg tggcggtatc tgtaggtatt gcgattgctg
     3901 cggctctaat cgattttaaa gcattaaatt tcccaggcaa tgatgcatta agttcacatt
     3961 tcggtattat tttaattatt ttaggtttaa tgagtattgt cggattagtt ttattcgtca
     4021 tcttaaatcg ttggacacaa tctgaaaaat aaatagatat aaattcgcga gatatattcg
     4081 tatttatagt aaaattaaat aaagagatta tataacacga ggagtagtaa gtatgaaatt
//
LOCUS       DAKPJH010000337         1122 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.guided.230, whole genome shotgun sequence.
ACCESSION   DAKPJH010000337 DAKPJH010000000
VERSION     DAKPJH010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.guided.230"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            <1..969
                     /locus_tag="OY092_002895"
     CDS             <1..969
                     /locus_tag="OY092_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HCX1077744.1"
                     /translation="AIMDSVLKTSFFNKNILSHSFNGKKSLLKRRLINIKEANLKKQS
                     KLILIFICIFTFFIMIIQSQFLMGQSLTDYNYKKPLQSDYQILDESKNFGSNSGSFVM
                     YSMKKDKYYIYNEKESRKRYSPDSTYKIYLALFGLDRHIISDKNSRMSWNHNHYPFDS
                     WNKDQDLNTAIQNSVNWYFERISNQLSKNYTSDQLKQLNYGNKNLGSYKAYWLEDSLK
                     ISNLEQVIVLKNMMEQNNHFSKNEKKQLSSSLLIRKNENYELYGKTGTGIVNGKYNNG
                     WFVGYVITNHDKYYFSTHLSDEKASGENAKLINEKILKEMGVLNGQ"
     gene            959..>1122
                     /locus_tag="OY092_002896"
     CDS             959..>1122
                     /locus_tag="OY092_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HCX1077745.1"
                     /translation="MANKQVEISMAEWDVMNIIWNKKSVSANEIVVEIQKNKEVSDKT
                     IRTLITRLYK"
BASE COUNT          469 a          122 c          170 g          361 t
ORIGIN      
        1 gctattatgg attccgtatt aaaaacctca tttttcaaca aaaatatatt aagccattca
       61 tttaatggta aaaaatcatt actcaaaaga agattaatta atataaaaga agccaatctg
      121 aagaagcagt caaaattaat tctaattttt atttgtattt ttactttttt tatcatgata
      181 attcaaagcc agtttttaat ggggcaatcc ttaactgatt ataattataa aaagccctta
      241 caaagcgatt accaaatttt agatgaaagt aaaaattttg gttcaaatag tggatctttc
      301 gttatgtaca gcatgaagaa agacaaatac tatatttata atgaaaaaga aagtagaaaa
      361 agatattctc ctgattcaac ttacaaaatt tatttagcac tgtttggact tgaccgtcat
      421 attataagtg ataaaaattc acgtatgtca tggaatcata atcattatcc tttcgattct
      481 tggaataagg atcaagattt aaatacggca atacaaaact cagttaattg gtacttcgaa
      541 cgtattagta atcaattatc aaagaactat acttctgatc aactcaagca attaaattat
      601 ggtaataaaa atttgggaag ttataaagcc tattggttgg aagatagttt gaaaatatct
      661 aatcttgaac aagtaatagt tttaaaaaat atgatggaac aaaataacca ttttagtaaa
      721 aatgaaaaga aacaattatc ttcttcgtta ttgattagaa aaaatgaaaa ttatgaattg
      781 tatgggaaaa caggtacagg tatagtaaac gggaaatata ataatgggtg gtttgtaggt
      841 tacgtaatta caaatcatga taagtattat ttttctacac atttatcaga tgaaaaagcc
      901 tctggtgaaa atgctaaatt aataaatgaa aaaatattaa aagaaatggg tgttttaaat
      961 ggccaataag caagttgaaa tatctatggc tgaatgggat gttatgaata taatatggaa
     1021 taaaaaatca gtatcagcta atgaaattgt agttgagatt caaaaaaata aagaagttag
     1081 cgataagacg attagaacat taattacaag actatataaa aa
//
LOCUS       DAKPJH010000338         1053 bp    DNA     linear   BCT 05-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate S_1432
            SAMEA3573927-rid16139803.guided.241, whole genome shotgun sequence.
ACCESSION   DAKPJH010000338 DAKPJH010000000
VERSION     DAKPJH010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA3573927
            Sequence Read Archive: ERR1041109
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001511378.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001511378.1
            Genome Coverage       :: 88x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/05/2022 06:21:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,898
            CDSs (total)                      :: 2,833
            Genes (coding)                    :: 2,766
            CDSs (with protein)               :: 2,766
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 37 of 67
            Pseudo Genes (incomplete)         :: 25 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 13 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA3573927-rid16139803.guided.241"
                     /isolate="S_1432"
                     /isolation_source="MRSA [Broth]"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2011-11-15"
     gene            complement(<1..342)
                     /locus_tag="OY092_002897"
     CDS             complement(<1..342)
                     /locus_tag="OY092_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HCX1077746.1"
                     /translation="MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLL
                     AGLIPFIPIKFSFFKFNNLNNQEPTVESNSHNLNPNINTTKPVHEFTTDIHKFNWDSI
                     DNICTVIWIVLV"
     gene            449..>1053
                     /locus_tag="OY092_002898"
     CDS             449..>1053
                     /locus_tag="OY092_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HCX1077747.1"
                     /translation="MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALD
                     TKSGKEVKFNADKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEK
                     YVGKDITLKELIEASMKYSDNTANNKIINEIGGIKKIKKRLKKLGDKVTNPVRYEIEL
                     NYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDL"
BASE COUNT          446 a          122 c          145 g          340 t
ORIGIN      
        1 aactaaaact atccaaataa ctgtgcagat attatctatt gaatcccaat taaacttatg
       61 gatgtctgtt gtaaactcat gaacaggttt agtggtattt atgttaggat tcaaattgtg
      121 tgaattactt tcaactgtgg gctcttgatt attcaaatta ttaaatttaa aaaaagagaa
      181 tttaataggg atgaaaggaa ttaatcctgc aagaagagtt agataccaaa ctttataatt
      241 taacatataa ttaaaatagc gttttaatat gtacctaaaa aataataaca atagaaatat
      301 aaaacaaaag cttactatgc tcattattaa taacttagcc atttcaacac cttctttcaa
      361 atatttataa taaactattg acgcgaatat tacaattgta atattattga tttatagaaa
      421 ttacaactgt aatattggag ggtatatttt gaaaaagtta atacttttaa ttgcaattgc
      481 tttagtttta agtgcatgta attcaaccag ttcacatgct aaagagttaa ataatttaga
      541 aaagaaatat aatgctaata ttggtgtcta tgcattagat actaaaagtg gtaaggaagt
      601 aaaatttaat gccgataaga gatttgccta tgcttcaact tcaaaagcga taaatagtgc
      661 tattttgtta gaacaagtac cttataataa gttaaataaa aaagtacata ttaacaaaga
      721 tgatatagtt gcttattctc ctattttaga aaaatatgta ggaaaagata tcactttaaa
      781 agaacttatt gaagcttcaa tgaagtatag tgataataca gcaaacaata aaattataaa
      841 cgaaatcggt ggaatcaaaa aaattaaaaa acgtttaaaa aaattgggag ataaagtaac
      901 aaatccagtt agatatgaaa tagaattaaa ttactattca ccaaagagca aaaaagatac
      961 ttcaacgcct gctgctttcg gcaagacttt aaataaactt atcgcaaatg gaaaattaag
     1021 caaaaaaaat aaaaatttct tacttgattt aat
//
